Psyllid ID: psy9639

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-
Protein Sequence
MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALTYITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVLDTPLTPQDHF
Secondary Structure (PSIPRED)
ccccccHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccEEEEEEEccccccEEEEEEEEEccccEEEEcccccccccEEEEEEEEEEEEcccccccccEEEEEEEEccccEEEEEEEcccHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEccccccccccEEEEEEEccEEEEEcccccccccEEEEccccccccEEEEcccccccccccEEEEEccccEEEEEEccHHHHHHHHHHHHHHcccccccccccHHHcccccHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHcccEEEccccccHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEccccccccEEEEEEEcccccEEEEEcccccccEEEEHHHccEEEccHHccccccEEEEEEEccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccEEccccccccccEEEEEEEcccEEEEEccccccccccEEEEccccccEEEEccccccccccccEEEEEccccEEEEEcccHHHHHHHHHHHHHHHccccccccccEEEcccccHHHHHHHHHHHHHHccccccHHHc
Coil and Loop (DISEMBL)
mkqignnvsklkyemrvpasykvptsscpqvLLKEWIRSKyereefrhpealtyITGHMDgflmkrgkesgkyhprrfVLNEINDTIKYYVKekkepkatlriselnvviapskiehphslqltfmkdgstrhIYVYHEESQSIMNWYHAIRNAKFHRlqvafpsandSELVKLLTRdfgregwlwktgpknadaYRKRWFTLDYRKlmyheeplsaypkgeiflghcsdgytvrlgvppgakdqgftftlktpqrwyqfsalsapdrdQWIQAVQTGFtftlktpqrwyqfsalsapdrdQWIQAVQTVldtpltpqdhf
Flexible Loop (DISEMBL)
mkqignnvsklkyemrvpasykvptsscpqvlLKEWIRSkyereefrhpealtyitgHMDGFLMKRGKEsgkyhprrfvlneiNDTIKYYVKekkepkatlrisELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTrdfgregwlwktgpknadayrKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVLdtpltpqdhf
Low Complexity Region (SEG)
MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALTYITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVLDTPLTPQDHF
Disordered region (IsUnstruct)
****************VPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALTYITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVLD*********
Disordered Region (DISOPRED)
******NVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEF***********HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKK*PKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLG*****KDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFT***************************************
Disordered Region (DISEMBL)
MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALTYITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVLDTPLTPQDHF
Disordered Region (DISPRO)
*****NNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALTYITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVLDTPLTP***F
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALTYITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVLDTPLTPQDHF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	321	2.2.26 [Sep-21-2011]
O75689	374	Arf-GAP with dual PH doma	yes	N/A	0.859	0.737	0.446	7e-71
Q9JK15	376	Arf-GAP with dual PH doma	no	N/A	0.890	0.760	0.381	7e-59
Q9NPF8	381	Arf-GAP with dual PH doma	no	N/A	0.906	0.763	0.364	3e-58
Q8R2V5	381	Arf-GAP with dual PH doma	no	N/A	0.894	0.753	0.375	1e-57
Q7SYB5	612	Differentially expressed	no	N/A	0.327	0.171	0.309	1e-05
Q8C2K1	630	Differentially expressed	no	N/A	0.327	0.166	0.292	6e-05
P63035	400	Cytohesin-2 OS=Rattus nor	no	N/A	0.439	0.352	0.255	0.0001
Q99418	400	Cytohesin-2 OS=Homo sapie	no	N/A	0.439	0.352	0.255	0.0001
A7ERM5	1435	Sterol 3-beta-glucosyltra	N/A	N/A	0.283	0.063	0.350	0.0001
Q4WID6	1405	Sterol 3-beta-glucosyltra	yes	N/A	0.286	0.065	0.340	0.0001

>sp|O75689|ADAP1_HUMAN Arf-GAP with dual PH domain-containing protein 1 OS=Homo sapiens GN=ADAP1 PE=1 SV=2

 Score =  267 bits (683), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 125/280 (44%), Positives = 194/280 (69%), Gaps = 4/280 (1%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
           M   GN+ ++ ++E +VP+ Y  PT S  Q+L ++WIR+KYER+EF +PE    Y  G+ 
Sbjct: 73  MASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQEPYSAGYR 132

Query: 60  DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHP 118
           +GFL KRG+++G++  R+FVL E    +KY+ + + KEPKA ++I  LN    P+KI HP
Sbjct: 133 EGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHP 192

Query: 119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRD 178
           H LQ+T++KD STR+I++YHE+ + I++W++A+R A+FH LQVAFP A D++LV  L+R+
Sbjct: 193 HGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGAGDADLVPKLSRN 252

Query: 179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
           + +EG++ KTGPK  + +RKRWFT+D R+LMY ++PL A+ +GE+F+G    GYTV  G 
Sbjct: 253 YLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGF 312

Query: 239 PPGAKDQGF--TFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
           PP  +   +    T+ TP R + F+  +  D+ +W+ A Q
Sbjct: 313 PPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQ 352

GTPase-activating protein for the ADP ribosylation factor family (Probable). Binds phosphatidylinositol 3,4,5-trisphosphate (PtdInsP3) and inositol 1,3,4,5-tetrakisphosphate (InsP4).
Homo sapiens (taxid: 9606)

>sp|Q9JK15|ADAP2_RAT Arf-GAP with dual PH domain-containing protein 2 OS=Rattus norvegicus GN=Adap2 PE=1 SV=1

 Score =  227 bits (579), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 122/320 (38%), Positives = 194/320 (60%), Gaps = 34/320 (10%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALTYITGHMD 60
           M   GN   K K+E RVP  Y VP +S   VL ++WIR+KYER+EF   +A++   G  +
Sbjct: 77  MTHNGNLSVKAKFEARVPTFYYVPQASDCLVLKEQWIRAKYERQEFMAEKAVS-PPGDRE 135

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNVVIAPSKIEHPH 119
           GFL KRG+++ ++  RRFVL      +KYY KE+ K PKA + I +LN      KI HPH
Sbjct: 136 GFLWKRGRDNSQFLRRRFVLLSREGLLKYYTKEEGKTPKAIINIKDLNATFQTEKIGHPH 195

Query: 120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDF 179
            LQ+T+ K+G TR+++VYH+  + I++W++A+R A+   L++AFP   +SELV L+TR++
Sbjct: 196 GLQITYRKEGQTRNLFVYHDSGKEIVDWFNALRAARLQYLKLAFPDLPESELVPLITRNY 255

Query: 180 GREGWLWKTGPKNADAYRKRWFTLD--YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLG 237
            ++G++ KTGPK+ + ++KRWF LD   R+L+Y++ PL A+ +G++FLG    GY V  G
Sbjct: 256 LKQGFMEKTGPKHREPFKKRWFALDPQERRLLYYKNPLDAFEQGQVFLGSNEQGYEVWEG 315

Query: 238 VPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSA 297
           +P G +            RW                  + G T    TP+R + F+  + 
Sbjct: 316 LPQGIRG----------NRW------------------KVGLTVI--TPERKFVFTCPTE 345

Query: 298 PDRDQWIQAVQTVLDTPLTP 317
            ++ +W+++++ VL +PL+P
Sbjct: 346 KEQREWLESLRGVLSSPLSP 365

GTPase-activating protein for the ADP ribosylation factor family (Potential). Binds phosphatidylinositol 4,5-bisphosphate, phosphatidylinositol 3,4,5-trisphosphate (PtdInsP3) and inositol 1,3,4,5-tetrakisphosphate (InsP4). Binding of phosphatidylinositol 3,5-bisphosphate and phosphatidylinositol 3,4-bisphosphate occurs at a much lower affinity. Possesses a stoichiometry of two binding sites for InsP4 with identical affinity.

Rattus norvegicus (taxid: 10116)

>sp|Q9NPF8|ADAP2_HUMAN Arf-GAP with dual PH domain-containing protein 2 OS=Homo sapiens GN=ADAP2 PE=1 SV=1

 Score =  225 bits (574), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 118/324 (36%), Positives = 189/324 (58%), Gaps = 33/324 (10%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALTYITGHMD 60
           M   GN   K K+E RVPA Y +P ++   VL ++WIR+KYER EF        + G+ +
Sbjct: 77  MIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWIRAKYERREFMADGETISLPGNRE 136

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNVVIAPSKIEHPH 119
           GFL KRG+++ ++  R+FVL      +KY+ KE+ K PKA + I +LN      KI HPH
Sbjct: 137 GFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKEQGKSPKAVISIKDLNATFQTEKIGHPH 196

Query: 120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDF 179
            LQ+T+ +DG TR+++VYHE  + I++W++A+R A+   L++AFP   +SELV  LTR++
Sbjct: 197 GLQITYRRDGHTRNLFVYHESGKEIVDWFNALRAARLQYLKMAFPELPESELVPFLTRNY 256

Query: 180 GREGWLWKTGPKNADAYRKRWFTLDY--RKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLG 237
            ++G++ KTGPK  + ++KRWF LD   R+L+Y++ PL A+ +G++FLG+   GY     
Sbjct: 257 LKQGFMEKTGPKQKEPFKKRWFALDCHERRLLYYKNPLDAFEQGQVFLGNKEQGYEAYED 316

Query: 238 VPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSA 297
           +P G +            RW                  + G T    TP+R +  +  S 
Sbjct: 317 LPKGIRG----------NRW------------------KAGLTIV--TPERRFVLTCPSE 346

Query: 298 PDRDQWIQAVQTVLDTPLTPQDHF 321
            ++ +W+++++ VL +PLTP +  
Sbjct: 347 KEQQEWLESLRGVLSSPLTPLNRL 370

GTPase-activating protein for the ADP ribosylation factor family (Potential). Binds phosphatidylinositol 3,4,5-trisphosphate (PtdInsP3) and inositol 1,3,4,5-tetrakisphosphate (InsP4). Possesses a stoichiometry of two binding sites for InsP4 with identical affinity.

Homo sapiens (taxid: 9606)

>sp|Q8R2V5|ADAP2_MOUSE Arf-GAP with dual PH domain-containing protein 2 OS=Mus musculus GN=Adap2 PE=2 SV=1

 Score =  223 bits (569), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 120/320 (37%), Positives = 191/320 (59%), Gaps = 33/320 (10%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALTYITGHMD 60
           M   GN   K K+E RVPA Y VP ++   VL ++WIR+KYER+EF   +      G+ +
Sbjct: 77  MTHHGNLNVKAKFEARVPAFYYVPQANDCLVLKEQWIRAKYERQEFTAIDKAVSHPGNRE 136

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNVVIAPSKIEHPH 119
           GFL KRG+++ ++  RRFVL      +KYY KE+ K PKA + I +LN      KI HPH
Sbjct: 137 GFLWKRGRDNAQFLRRRFVLLSREGLLKYYTKEEGKAPKAVISIKDLNATFQTEKIGHPH 196

Query: 120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDF 179
            LQ+T+ K+G TR+++VYH+  + I++W++A+R A+   L++AFP   +SELV L+TR++
Sbjct: 197 GLQITYRKEGHTRNLFVYHDSGKEIVDWFNALRAARLQYLKLAFPDLPESELVPLITRNY 256

Query: 180 GREGWLWKTGPKNADAYRKRWFTLD--YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLG 237
            ++G++ KTGPK+ + ++KRWF LD   R+L+Y++ PL A+  G++FLG    GY V   
Sbjct: 257 LKQGFMEKTGPKHREPFKKRWFALDPQERRLLYYKNPLDAFELGQVFLGSNEQGYEVWED 316

Query: 238 VPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSA 297
           +P G +            RW                  + G T    TP+R + F+  + 
Sbjct: 317 LPKGIRG----------NRW------------------KAGLTVI--TPERKFIFTCPTE 346

Query: 298 PDRDQWIQAVQTVLDTPLTP 317
            ++ +W+++++ VL +PL+P
Sbjct: 347 KEQREWLESLRGVLSSPLSP 366

GTPase-activating protein for the ADP ribosylation factor family (Potential). Binds phosphatidylinositol 3,4,5-trisphosphate (PtdInsP3) and inositol 1,3,4,5-tetrakisphosphate (InsP4). Possesses a stoichiometry of two binding sites for InsP4 with identical affinity.

Mus musculus (taxid: 10090)

>sp|Q7SYB5|DEFI6_DANRE Differentially expressed in FDCP 6 homolog OS=Danio rerio GN=def6 PE=2 SV=1

 Score = 51.2 bits (121), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 170 ELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFL-GHC 228
           E+ + +  D  +EG+LWK G    + + +RWFTL    L+Y         KG I L G+C
Sbjct: 203 EVYREIVGDVLKEGYLWKKGQLRRN-WTERWFTLRPSTLLYFTSEDRKDHKGNIQLDGNC 261

Query: 229 SDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTF 281
                  + V P    +   F LKT  + Y+ SA     R +W  A+QT    
Sbjct: 262 C------VEVLPDRDGKRCMFCLKTLTKTYELSASDTKQRQEWTTAIQTAIRL 308

Danio rerio (taxid: 7955)

>sp|Q8C2K1|DEFI6_MOUSE Differentially expressed in FDCP 6 OS=Mus musculus GN=Def6 PE=1 SV=1

 Score = 48.5 bits (114), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 170 ELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFL-GHC 228
           E+ + L +D  ++G+LWK G    + + +RWF L    L Y         +G I L  HC
Sbjct: 208 EVYQELIQDVLKQGYLWKRGHLRRN-WAERWFQLQPSSLCYFGSEECKEKRGTIPLDAHC 266

Query: 229 SDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTF 281
                  + V P  + +   F +KT  R Y+ SA     R +W  A+QT    
Sbjct: 267 C------VEVLPDREGKRCMFCVKTASRTYEMSASDTRQRQEWTAAIQTAIRL 313

Phosphatidylinositol 3,4,5-trisphosphate-dependent guanine nucleotide exchange factor (GEF) which plays a role in the activation of Rho GTPases RAC1, RhoA and CDC42. Can regulate cell morphology in cooperation with activated RAC1. Plays a role in Th2 (T helper cells) development and/or activation, perhaps by interfering with ZAP70 signaling. Required for optimal T-cell effector function, lymphocyte homeostasis and the prevention of sytemic autoimmunity.

Mus musculus (taxid: 10090)

>sp|P63035|CYH2_RAT Cytohesin-2 OS=Rattus norvegicus GN=Cyth2 PE=1 SV=1

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 31/172 (18%)

Query: 144 IMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDF---GREGWLWKTGPKNADAYRKRW 200
           + N Y +IRN  F   ++     ND      LT  F    REGWL K G      +++RW
Sbjct: 231 LRNLYDSIRNEPF---KIPEDDGND------LTHTFFNPDREGWLLKLGGGRVKTWKRRW 281

Query: 201 FTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQF 260
           F L    L Y E      P+G I L + S    +R               +  P++   F
Sbjct: 282 FILTDNCLYYFEYTTDKEPRGIIPLENLS----IR--------------EVDDPRKPNCF 323

Query: 261 SALSAPDRDQWIQAVQT-GFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVL 311
                 ++ Q I+A +T      ++     Y+ SA +  ++D+WI+++Q  +
Sbjct: 324 ELYIPNNKGQLIKACKTEADGRVVEGNHMVYRISAPTQEEKDEWIKSIQAAV 375

Acts as a guanine-nucleotide exchange factor (GEF). Promotes guanine-nucleotide exchange on ARF1, ARF3 and ARF6. Promotes the activation of ARF factors through replacement of GDP with GTP. The cell membrane form, in association with ARL4 proteins, recruits ARF6 to the plasma membrane.

Rattus norvegicus (taxid: 10116)

>sp|Q99418|CYH2_HUMAN Cytohesin-2 OS=Homo sapiens GN=CYTH2 PE=1 SV=2

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 31/172 (18%)

Query: 144 IMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDF---GREGWLWKTGPKNADAYRKRW 200
           + N Y +IRN  F   ++     ND      LT  F    REGWL K G      +++RW
Sbjct: 231 LRNLYDSIRNEPF---KIPEDDGND------LTHTFFNPDREGWLLKLGGGRVKTWKRRW 281

Query: 201 FTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQF 260
           F L    L Y E      P+G I L + S    +R               +  P++   F
Sbjct: 282 FILTDNCLYYFEYTTDKEPRGIIPLENLS----IR--------------EVDDPRKPNCF 323

Query: 261 SALSAPDRDQWIQAVQT-GFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVL 311
                 ++ Q I+A +T      ++     Y+ SA +  ++D+WI+++Q  +
Sbjct: 324 ELYIPNNKGQLIKACKTEADGRVVEGNHMVYRISAPTQEEKDEWIKSIQAAV 375

Acts as a guanine-nucleotide exchange factor (GEF). Promotes guanine-nucleotide exchange on ARF1, ARF3 and ARF6. Promotes the activation of ARF factors through replacement of GDP with GTP. The cell membrane form, in association with ARL4 proteins, recruits ARF6 to the plasma membrane.

Homo sapiens (taxid: 9606)

>sp|A7ERM5|ATG26_SCLS1 Sterol 3-beta-glucosyltransferase OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=atg26 PE=3 SV=1

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 6/97 (6%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAY-PKGEIFLGHCSDGYTVRLGVP 239
           + G+L K+G  N   Y + WF L    L Y+  P   Y P G I L +   G +  +   
Sbjct: 265 KSGYLSKSGRHNP-KYNRYWFRLKDDVLSYYTNPSDLYFPSGNIDLRY---GISASIVEK 320

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
              KD    FT++T QR Y F+A SAP   +W++A+Q
Sbjct: 321 EKGKDSTH-FTVETHQRKYNFNADSAPSAKEWVKALQ 356

May be involved in decane metabolism and autophagy. Involved in the biosynthesis of sterol glucoside.

Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (taxid: 665079)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 3

>sp|Q4WID6|ATG26_ASPFU Sterol 3-beta-glucosyltransferase OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=atg26 PE=3 SV=2

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 5/97 (5%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAY-PKGEIFLGHCSDGYTVRLGVP 239
           + G+L K G KN   Y + WF+L    L Y+ +P + Y P G + L +   G +  LG P
Sbjct: 288 KSGYLHKRGRKNP-KYSRYWFSLKGDVLSYYADPSNLYFPSGHVDLRY---GISASLGDP 343

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
                +   F + T QR Y F A SA    +W++A+Q
Sbjct: 344 KEKGREPRDFQVTTDQRTYYFRADSAMSAKEWVKALQ 380

May be involved in decane metabolism and autophagy. Involved in the biosynthesis of sterol glucoside.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
307192579	385	Centaurin-alpha-1 [Harpegnathos saltator	0.894	0.745	0.581	1e-106
307170306	385	Centaurin-alpha-1 [Camponotus floridanus	0.894	0.745	0.575	1e-106
332018523	385	Arf-GAP with dual PH domain-containing p	0.894	0.745	0.578	1e-105
383855137	385	PREDICTED: arf-GAP with dual PH domain-c	0.894	0.745	0.581	1e-105
340715562	385	PREDICTED: arf-GAP with dual PH domain-c	0.894	0.745	0.578	1e-104
380019550	385	PREDICTED: arf-GAP with dual PH domain-c	0.894	0.745	0.578	1e-104
312384821	345	hypothetical protein AND_01491 [Anophele	0.859	0.8	0.652	1e-104
328789339	385	PREDICTED: arf-GAP with dual PH domain-c	0.894	0.745	0.575	1e-104
158285769	383	AGAP007379-PA [Anopheles gambiae str. PE	0.862	0.723	0.635	1e-104
157117493	384	centaurin alpha [Aedes aegypti] gi|10887	0.859	0.718	0.637	1e-103

>gi|307192579|gb|EFN75767.1| Centaurin-alpha-1 [Harpegnathos saltator]

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 186/320 (58%), Positives = 233/320 (72%), Gaps = 33/320 (10%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
           M+++GN  ++L YE RVP+ Y+ P+   PQVL+++WIR+KYEREEF HPE    Y++G M
Sbjct: 74  MREVGNAAARLHYEERVPSCYRRPSPDAPQVLVEQWIRAKYEREEFCHPERQNHYVSGFM 133

Query: 60  DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPH 119
           +GFLMKRGKE  +YHPR+FVL+E  DT+KY+VKE KEPKA LRISELNV   P+K  + +
Sbjct: 134 EGFLMKRGKEDSRYHPRKFVLSEAEDTLKYHVKENKEPKAILRISELNVAFVPTKTGNQN 193

Query: 120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDF 179
           SLQL+FMKDG+TRHIYVYHE+ + I NWY AIR AK HRLQVA+P AN++EL+  LTRDF
Sbjct: 194 SLQLSFMKDGTTRHIYVYHEDPEVITNWYLAIRCAKLHRLQVAYPGANENELLSQLTRDF 253

Query: 180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
            REG+LWKTGP++ DAY+KRWFTLD RKLMYH++P+ A+PKGEIFLGH S+G+ V+ GVP
Sbjct: 254 PREGFLWKTGPRHTDAYKKRWFTLDGRKLMYHDDPMDAHPKGEIFLGHGSEGFAVKTGVP 313

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPD 299
           PGA+DQGF+FTL+TP R Y  SA S  DR QW                            
Sbjct: 314 PGARDQGFSFTLETPDRTYLLSAQSDDDRSQW---------------------------- 345

Query: 300 RDQWIQAVQTVLDTPLTPQD 319
               I  +Q V+D PLTPQD
Sbjct: 346 ----INVIQKVIDKPLTPQD 361

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307170306|gb|EFN62661.1| Centaurin-alpha-1 [Camponotus floridanus]

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/320 (57%), Positives = 234/320 (73%), Gaps = 33/320 (10%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
           ++++GN +++L YE RVP+ Y+ P+   PQVL+++WIR+KYEREEF HPE    Y++G M
Sbjct: 74  IREVGNTIARLHYEERVPSCYRRPSPDAPQVLVEQWIRAKYEREEFCHPERQNHYVSGFM 133

Query: 60  DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPH 119
           +GFLMKRGKE  +YHPR+FVL E  DT+KY+VKE KEPKA LRISELNV  AP K  + +
Sbjct: 134 EGFLMKRGKEDSRYHPRKFVLCEAEDTLKYHVKENKEPKAVLRISELNVAFAPPKTGNQN 193

Query: 120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDF 179
           SLQL+FMKDG+TRHIYVYHE+ + I NWY AIR AK HRLQVA+P A+++EL+  LTRDF
Sbjct: 194 SLQLSFMKDGTTRHIYVYHEDPEVITNWYLAIRCAKLHRLQVAYPGASENELLSQLTRDF 253

Query: 180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
            REG+LWKTGP++ DAY+KRWFTLD RKLMYH++P+ A+PKGEIFLGH S+G+ V++GVP
Sbjct: 254 PREGFLWKTGPRHTDAYKKRWFTLDGRKLMYHDDPMDAHPKGEIFLGHSSEGFAVKIGVP 313

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPD 299
           PGA+DQGF+FTL+TP R Y  SA S  DR Q                             
Sbjct: 314 PGARDQGFSFTLETPDRTYLLSAQSDDDRSQ----------------------------- 344

Query: 300 RDQWIQAVQTVLDTPLTPQD 319
              W+  +Q V+D PLTPQD
Sbjct: 345 ---WMHVIQKVIDKPLTPQD 361

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018523|gb|EGI59113.1| Arf-GAP with dual PH domain-containing protein 1 [Acromyrmex echinatior]

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/320 (57%), Positives = 232/320 (72%), Gaps = 33/320 (10%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
           ++++GNN ++++YE RVP+ Y+ P    PQVL+++WIR+KYEREEF HPE    Y++G M
Sbjct: 74  IREVGNNKARMRYEERVPSCYRRPNPDTPQVLVEQWIRAKYEREEFCHPERQNHYVSGFM 133

Query: 60  DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPH 119
           +GFLMKRGKE  +YHPR+FVL E  DT+KY+VKE KEPKA LRISELNV  AP KI + +
Sbjct: 134 EGFLMKRGKEDSRYHPRKFVLREAEDTLKYHVKENKEPKAVLRISELNVAFAPPKIGNQN 193

Query: 120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDF 179
           SLQL+FMKDG+TRHIYVYHE+ + I NWY AIR AK HRLQVA+P AN++EL+  LTRDF
Sbjct: 194 SLQLSFMKDGTTRHIYVYHEDPEVITNWYLAIRCAKLHRLQVAYPGANENELLSQLTRDF 253

Query: 180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
            REG+LWKTGP++ DAY+KRWFTLD RKLMYH++P+ A+PKGEIFLGH S+ + V+ GVP
Sbjct: 254 PREGFLWKTGPRHTDAYKKRWFTLDGRKLMYHDDPMDAHPKGEIFLGHSSESFAVKTGVP 313

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPD 299
            GA+DQGF+FTL+TP R Y  SA S  DR QW                            
Sbjct: 314 QGARDQGFSFTLETPDRTYLLSAQSDDDRSQW---------------------------- 345

Query: 300 RDQWIQAVQTVLDTPLTPQD 319
               I  +Q V+D PLTPQD
Sbjct: 346 ----ISVIQKVIDKPLTPQD 361

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383855137|ref|XP_003703074.1| PREDICTED: arf-GAP with dual PH domain-containing protein 1-like [Megachile rotundata]

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/320 (58%), Positives = 230/320 (71%), Gaps = 33/320 (10%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
           ++++GN  ++L YE RVP  Y+ P+   PQVL+++WIR+KYEREEF HPE    Y++G M
Sbjct: 74  IREVGNVAARLHYEERVPPCYRRPSPDAPQVLVEQWIRAKYEREEFCHPERQNHYVSGFM 133

Query: 60  DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPH 119
           +GFLMKRGKE  +YHPR+FVL E  DT+KY+VKE KEPKA LRISELNV  AP K  + +
Sbjct: 134 EGFLMKRGKEDSRYHPRKFVLCEAEDTLKYHVKENKEPKAVLRISELNVAFAPPKTGNQN 193

Query: 120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDF 179
           SLQ++FMKDG+TRHIYVYHE+ + I NWY AIR AK HRLQVA+P A ++EL+  LTRDF
Sbjct: 194 SLQISFMKDGTTRHIYVYHEDPEVITNWYLAIRCAKLHRLQVAYPGATEAELLSQLTRDF 253

Query: 180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
            REG+LWKTGP++ DAY+KRWFTLD RKLMYH++P+ A+PKGEIFLGH SDG+ VR GVP
Sbjct: 254 PREGFLWKTGPRHTDAYKKRWFTLDGRKLMYHDDPMDAHPKGEIFLGHSSDGFAVRTGVP 313

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPD 299
           PGAKDQGF+FTL+TP R Y  SA S  DR Q                             
Sbjct: 314 PGAKDQGFSFTLETPDRTYLLSAQSDDDRTQ----------------------------- 344

Query: 300 RDQWIQAVQTVLDTPLTPQD 319
              W+  +Q V+D PLTPQD
Sbjct: 345 ---WMNVIQKVIDKPLTPQD 361

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715562|ref|XP_003396280.1| PREDICTED: arf-GAP with dual PH domain-containing protein 1-like [Bombus terrestris] gi|350418001|ref|XP_003491685.1| PREDICTED: arf-GAP with dual PH domain-containing protein 1-like [Bombus impatiens]

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/320 (57%), Positives = 229/320 (71%), Gaps = 33/320 (10%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
           ++++GN  ++L YE RVP  Y+ P    PQVL+++WIR+KYEREEF HPE    Y++G M
Sbjct: 74  IREVGNIAARLHYEERVPPCYRRPNPDAPQVLVEQWIRAKYEREEFCHPERQNHYVSGFM 133

Query: 60  DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPH 119
           +GFLMKRGKE  +YHPR+FVL E +DT+KY+VKE KEPKA LRISELNV  AP K  + +
Sbjct: 134 EGFLMKRGKEDSRYHPRKFVLCEADDTLKYHVKENKEPKAVLRISELNVAFAPPKTCNQN 193

Query: 120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDF 179
           SLQ++FMKDG+TRHIYVYHE+ + I NWY AIR AK HRLQVA+P A ++EL+  LTRDF
Sbjct: 194 SLQISFMKDGTTRHIYVYHEDPEVITNWYLAIRCAKLHRLQVAYPGATEAELLSQLTRDF 253

Query: 180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
            REG+LWKTGP+  DAY+KRWFTLD RKLMYH++P+ A+PKGEIFLGH SDG+ V+ GVP
Sbjct: 254 PREGFLWKTGPRYTDAYKKRWFTLDGRKLMYHDDPMDAHPKGEIFLGHSSDGFAVKTGVP 313

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPD 299
           PGA+DQGF+FTL+TP R Y  SA S  DR QW                            
Sbjct: 314 PGARDQGFSFTLETPDRTYLLSAQSDDDRSQW---------------------------- 345

Query: 300 RDQWIQAVQTVLDTPLTPQD 319
               I  +Q V+D PLTPQD
Sbjct: 346 ----ISVIQKVIDKPLTPQD 361

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380019550|ref|XP_003693667.1| PREDICTED: arf-GAP with dual PH domain-containing protein 1-like [Apis florea]

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/320 (57%), Positives = 228/320 (71%), Gaps = 33/320 (10%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
           ++++GN  ++L YE RVP  Y+ P    PQVL+++WIR+KYEREEF HPE    Y++G M
Sbjct: 74  IREVGNIAARLHYEERVPPCYRRPNPDAPQVLIEQWIRAKYEREEFCHPERQNHYVSGFM 133

Query: 60  DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPH 119
           +GFLMKRGKE  +YHPR+FVL E  DT+KY+VKE KEPKA LRISELNV  AP K  + +
Sbjct: 134 EGFLMKRGKEDSRYHPRKFVLCEAEDTLKYHVKENKEPKAVLRISELNVAFAPPKTGNQN 193

Query: 120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDF 179
           SLQ++FMKDG+TRHIYVYHE+ + I NWY AIR AK HRLQVA+P A ++EL+  LTRDF
Sbjct: 194 SLQISFMKDGTTRHIYVYHEDPEVITNWYLAIRCAKLHRLQVAYPGATEAELLSQLTRDF 253

Query: 180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
            REG+LWKTGP+  DAY+KRWFTLD RKLMYH++P+ A+PKGEIFLGH SDG+ V+ GVP
Sbjct: 254 PREGFLWKTGPRYTDAYKKRWFTLDGRKLMYHDDPMDAHPKGEIFLGHSSDGFAVKTGVP 313

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPD 299
           PGA+DQGF+FTL+TP R Y  SA S  DR QW                            
Sbjct: 314 PGARDQGFSFTLETPDRTYLLSAQSDDDRSQW---------------------------- 345

Query: 300 RDQWIQAVQTVLDTPLTPQD 319
               I  +Q V+D PLTPQD
Sbjct: 346 ----INVIQKVIDKPLTPQD 361

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312384821|gb|EFR29454.1| hypothetical protein AND_01491 [Anopheles darlingi]

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 180/276 (65%), Positives = 225/276 (81%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALTYITGHMD 60
           M  +GN  SKLKYE RVPA Y+ P  + PQVL+++WIR+KYER EF   E  +Y +G M+
Sbjct: 24  MIDMGNKNSKLKYEQRVPACYRRPRENDPQVLIEQWIRAKYERLEFCMIERPSYTSGRME 83

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHS 120
           GFL+KRGKE  +Y PR+FVL+ I+DT++YYV+E +EPKATLRISELNVV AP+KI +P+S
Sbjct: 84  GFLLKRGKEDSRYQPRKFVLSGIHDTLRYYVRETREPKATLRISELNVVYAPAKIGNPNS 143

Query: 121 LQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFG 180
           LQLTFM+DGSTRHIYVYH+++Q I NWY AIR AK HRLQVAFPSA +S+LV +LT DF 
Sbjct: 144 LQLTFMRDGSTRHIYVYHDDAQVINNWYMAIRCAKLHRLQVAFPSALESDLVDMLTHDFV 203

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           REGWL KTGP++ D+Y++RWFTLD RKLMYH++ L A+PKGEIFLG+  DGY+VR+G P 
Sbjct: 204 REGWLLKTGPRSTDSYKRRWFTLDDRKLMYHDDQLDAHPKGEIFLGNQLDGYSVRIGAPI 263

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
           GAKDQGF+FTL TP+R Y  S+ S  DRD+WI A+Q
Sbjct: 264 GAKDQGFSFTLFTPERTYNMSSHSEQDRDEWIAAIQ 299

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328789339|ref|XP_624178.2| PREDICTED: arf-GAP with dual PH domain-containing protein 1-like [Apis mellifera]

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/320 (57%), Positives = 228/320 (71%), Gaps = 33/320 (10%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
           ++++GN  ++L YE RVP  Y+ P    PQVL+++WIR+KYEREEF HPE    Y++G M
Sbjct: 74  IREVGNIAARLHYEERVPPCYRRPNPDAPQVLIEQWIRAKYEREEFCHPERQNHYVSGFM 133

Query: 60  DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPH 119
           +GFLMKRGKE  +YHPR+FVL E  DT+KY+VKE KEPKA LRISELNV  AP K  + +
Sbjct: 134 EGFLMKRGKEDSRYHPRKFVLCEAEDTLKYHVKENKEPKAVLRISELNVAFAPPKTGNQN 193

Query: 120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDF 179
           SLQ++FMKDG+TRHIYVYHE+ + I NWY AIR AK HRLQVA+P A ++EL+  LTRDF
Sbjct: 194 SLQISFMKDGTTRHIYVYHEDPEVITNWYLAIRCAKLHRLQVAYPGATEAELLSQLTRDF 253

Query: 180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
            REG+LWKTGP+  DAY+KRWFTLD RKLMYH++P+ A+PKGEIFLGH SDG+ V+ GVP
Sbjct: 254 PREGFLWKTGPRYTDAYKKRWFTLDGRKLMYHDDPMDAHPKGEIFLGHSSDGFAVKTGVP 313

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPD 299
           PGA+DQGF+FTL+TP R Y  SA S  DR Q                             
Sbjct: 314 PGARDQGFSFTLETPDRTYLLSAQSDDDRSQ----------------------------- 344

Query: 300 RDQWIQAVQTVLDTPLTPQD 319
              W+  +Q V+D PLTPQD
Sbjct: 345 ---WMNVIQKVIDKPLTPQD 361

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158285769|ref|XP_308452.4| AGAP007379-PA [Anopheles gambiae str. PEST] gi|157020152|gb|EAA04627.4| AGAP007379-PA [Anopheles gambiae str. PEST]

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 176/277 (63%), Positives = 225/277 (81%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALTYITGHMD 60
           M  +GN  ++LKYE RVPA Y+ P  + PQ+L+++WIR+KYER EF   E  +Y +G M+
Sbjct: 74  MIDVGNKSARLKYENRVPACYRRPKENDPQILIEQWIRAKYERLEFCMIERPSYTSGRME 133

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHS 120
           GFLMKRGKE  +Y PR+FVL+ ++DT++YYVKEK+EPKA LRISELNVV APSKI +P+S
Sbjct: 134 GFLMKRGKEDSRYQPRKFVLSGLHDTLRYYVKEKREPKAILRISELNVVYAPSKIGNPNS 193

Query: 121 LQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFG 180
           LQLTFMK+G+TRHIYVYH++ + I NWY AIR AK HRLQ+A+PSA++S+LV LLT DF 
Sbjct: 194 LQLTFMKEGTTRHIYVYHDDPEVINNWYMAIRCAKLHRLQIAYPSASESDLVDLLTHDFT 253

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           REGWL KTGP+  D+Y++RWFTLD RKLMYH++ L A+PKGEIFLG+  DGY+VR+G PP
Sbjct: 254 REGWLLKTGPRATDSYKRRWFTLDDRKLMYHDDQLDAHPKGEIFLGNQLDGYSVRIGAPP 313

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
           GAKDQG++FTL TP+R Y  S+ S  DRD+WI A+Q 
Sbjct: 314 GAKDQGYSFTLFTPERVYNMSSHSEQDRDEWIAAIQN 350

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157117493|ref|XP_001658794.1| centaurin alpha [Aedes aegypti] gi|108876033|gb|EAT40258.1| AAEL007996-PA [Aedes aegypti]

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/276 (63%), Positives = 222/276 (80%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALTYITGHMD 60
           M ++GN VSK KYEMRVPA Y+ P  + PQVL ++WIR+KYER EF   +   Y +GHM+
Sbjct: 75  MIEVGNRVSKQKYEMRVPACYRRPRENDPQVLTEQWIRAKYERLEFCLNDRPAYTSGHME 134

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHS 120
           GFLMKRGKE  +Y  R+F+L+E +DT++Y+VKEK+EPKA LRISELNVV AP+KI +P+S
Sbjct: 135 GFLMKRGKEDSRYQLRKFILSEADDTLRYFVKEKREPKAILRISELNVVFAPAKIGNPNS 194

Query: 121 LQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFG 180
           LQLTFMKDG+TRHIYVYH++ + I NWY AIR AK HRLQ+A+PSA++S+LV  LT DF 
Sbjct: 195 LQLTFMKDGTTRHIYVYHDDPKEINNWYMAIRCAKLHRLQIAYPSASESDLVDYLTHDFA 254

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           REGWL KTGP+  D+Y++RWFTLD RKLMYH++PL A PKGEIFLG+  DGY+VR+G P 
Sbjct: 255 REGWLLKTGPRTTDSYKQRWFTLDDRKLMYHDDPLDANPKGEIFLGNHLDGYSVRIGAPV 314

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
           GAKDQGF+FTL TP+R Y  S+ S  DRD+W+  +Q
Sbjct: 315 GAKDQGFSFTLFTPERTYNLSSHSEQDRDEWMTVIQ 350

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
RGD|621418	374	Adap1 "ArfGAP with dual PH dom	0.859	0.737	0.453	2e-75
UNIPROTKB|F1M3B6	362	Adap1 "Protein Adap1" [Rattus	0.859	0.762	0.453	2e-75
UNIPROTKB|O88768	374	Adap1 "Protein Adap1" [Rattus	0.859	0.737	0.453	2e-75
UNIPROTKB|F6XZ68	385	ADAP1 "Arf-GAP with dual PH do	0.859	0.716	0.446	4.1e-75
UNIPROTKB|H0Y7Q1	357	ADAP1 "Arf-GAP with dual PH do	0.859	0.773	0.446	4.1e-75
UNIPROTKB|H7C2Q4	302	ADAP1 "Arf-GAP with dual PH do	0.859	0.913	0.446	4.1e-75
UNIPROTKB|O75689	374	ADAP1 "Arf-GAP with dual PH do	0.859	0.737	0.446	4.1e-75
UNIPROTKB|E2R2R3	374	ADAP1 "Uncharacterized protein	0.853	0.732	0.446	4.1e-73
UNIPROTKB|F1NK48	376	ADAP1 "Uncharacterized protein	0.859	0.734	0.45	5.3e-73
UNIPROTKB|O02753	373	ADAP1 "Uncharacterized protein	0.853	0.734	0.441	1.4e-72

RGD|621418 Adap1 "ArfGAP with dual PH domains 1" [Rattus norvegicus (taxid:10116)]

 Score = 694 (249.4 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
 Identities = 127/280 (45%), Positives = 192/280 (68%)

Query:     1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
             M   GN  ++  +E +VP  Y  PT S  Q+L ++WIR+KYER+EF H E    Y TG+ 
Sbjct:    73 MTSHGNEAARATFESKVPPFYYRPTFSDCQLLREQWIRAKYERQEFLHVEKQEPYSTGYR 132

Query:    60 DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHP 118
             +G L KRG+++G++  R+FVL E    +KY+ K + KEPKA ++I  LN    P+KI HP
Sbjct:   133 EGLLWKRGRDNGQFLSRKFVLTEREGALKYFNKNDAKEPKAVMKIEHLNATFQPAKIGHP 192

Query:   119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRD 178
             H LQ+T++KD STR+I++YHE+ + I++W++A+R A+FH LQVAFP A+D++LV  L+R+
Sbjct:   193 HGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLSRN 252

Query:   179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
             + +EG++ KTGPK  + +RKRWFT+D R+LMY ++PL A+ +GE+F+G    GYTV  G+
Sbjct:   253 YLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLEGL 312

Query:   239 PPGAKDQGFT--FTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
             PP  +   +    T+ TP R + F+  +  D+ +WI A Q
Sbjct:   313 PPSTQSHHWPHGITIVTPDRKFLFTCETESDQREWIAAFQ 352

GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate binding" evidence=IDA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0008060 "ARF GTPase activator activity" evidence=ISO

GO:0043087 "regulation of GTPase activity" evidence=ISO

GO:0048016 "inositol phosphate-mediated signaling" evidence=NAS

UNIPROTKB|F1M3B6 Adap1 "Protein Adap1" [Rattus norvegicus (taxid:10116)]

 Score = 694 (249.4 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
 Identities = 127/280 (45%), Positives = 192/280 (68%)

Query:     1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
             M   GN  ++  +E +VP  Y  PT S  Q+L ++WIR+KYER+EF H E    Y TG+ 
Sbjct:    61 MTSHGNEAARATFESKVPPFYYRPTFSDCQLLREQWIRAKYERQEFLHVEKQEPYSTGYR 120

Query:    60 DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHP 118
             +G L KRG+++G++  R+FVL E    +KY+ K + KEPKA ++I  LN    P+KI HP
Sbjct:   121 EGLLWKRGRDNGQFLSRKFVLTEREGALKYFNKNDAKEPKAVMKIEHLNATFQPAKIGHP 180

Query:   119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRD 178
             H LQ+T++KD STR+I++YHE+ + I++W++A+R A+FH LQVAFP A+D++LV  L+R+
Sbjct:   181 HGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLSRN 240

Query:   179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
             + +EG++ KTGPK  + +RKRWFT+D R+LMY ++PL A+ +GE+F+G    GYTV  G+
Sbjct:   241 YLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLEGL 300

Query:   239 PPGAKDQGFT--FTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
             PP  +   +    T+ TP R + F+  +  D+ +WI A Q
Sbjct:   301 PPSTQSHHWPHGITIVTPDRKFLFTCETESDQREWIAAFQ 340

GO:0005543 "phospholipid binding" evidence=IEA

GO:0008060 "ARF GTPase activator activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0032312 "regulation of ARF GTPase activity" evidence=IEA

UNIPROTKB|O88768 Adap1 "Protein Adap1" [Rattus norvegicus (taxid:10116)]

 Score = 694 (249.4 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
 Identities = 127/280 (45%), Positives = 192/280 (68%)

Query:     1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
             M   GN  ++  +E +VP  Y  PT S  Q+L ++WIR+KYER+EF H E    Y TG+ 
Sbjct:    73 MTSHGNEAARATFESKVPPFYYRPTFSDCQLLREQWIRAKYERQEFLHVEKQEPYSTGYR 132

Query:    60 DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHP 118
             +G L KRG+++G++  R+FVL E    +KY+ K + KEPKA ++I  LN    P+KI HP
Sbjct:   133 EGLLWKRGRDNGQFLSRKFVLTEREGALKYFNKNDAKEPKAVMKIEHLNATFQPAKIGHP 192

Query:   119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRD 178
             H LQ+T++KD STR+I++YHE+ + I++W++A+R A+FH LQVAFP A+D++LV  L+R+
Sbjct:   193 HGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLSRN 252

Query:   179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
             + +EG++ KTGPK  + +RKRWFT+D R+LMY ++PL A+ +GE+F+G    GYTV  G+
Sbjct:   253 YLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLEGL 312

Query:   239 PPGAKDQGFT--FTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
             PP  +   +    T+ TP R + F+  +  D+ +WI A Q
Sbjct:   313 PPSTQSHHWPHGITIVTPDRKFLFTCETESDQREWIAAFQ 352

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0008060 "ARF GTPase activator activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0032312 "regulation of ARF GTPase activity" evidence=IEA

UNIPROTKB|F6XZ68 ADAP1 "Arf-GAP with dual PH domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 696 (250.1 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
 Identities = 125/280 (44%), Positives = 194/280 (69%)

Query:     1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
             M   GN+ ++ ++E +VP+ Y  PT S  Q+L ++WIR+KYER+EF +PE    Y  G+ 
Sbjct:    84 MASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQEPYSAGYR 143

Query:    60 DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHP 118
             +GFL KRG+++G++  R+FVL E    +KY+ + + KEPKA ++I  LN    P+KI HP
Sbjct:   144 EGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHP 203

Query:   119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRD 178
             H LQ+T++KD STR+I++YHE+ + I++W++A+R A+FH LQVAFP A D++LV  L+R+
Sbjct:   204 HGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGAGDADLVPKLSRN 263

Query:   179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
             + +EG++ KTGPK  + +RKRWFT+D R+LMY ++PL A+ +GE+F+G    GYTV  G 
Sbjct:   264 YLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGF 323

Query:   239 PPGAKDQGFT--FTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
             PP  +   +    T+ TP R + F+  +  D+ +W+ A Q
Sbjct:   324 PPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQ 363

GO:0005543 "phospholipid binding" evidence=IEA

GO:0008060 "ARF GTPase activator activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0032312 "regulation of ARF GTPase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|H0Y7Q1 ADAP1 "Arf-GAP with dual PH domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 696 (250.1 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
 Identities = 125/280 (44%), Positives = 194/280 (69%)

Query:     1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
             M   GN+ ++ ++E +VP+ Y  PT S  Q+L ++WIR+KYER+EF +PE    Y  G+ 
Sbjct:    56 MASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQEPYSAGYR 115

Query:    60 DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHP 118
             +GFL KRG+++G++  R+FVL E    +KY+ + + KEPKA ++I  LN    P+KI HP
Sbjct:   116 EGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHP 175

Query:   119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRD 178
             H LQ+T++KD STR+I++YHE+ + I++W++A+R A+FH LQVAFP A D++LV  L+R+
Sbjct:   176 HGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGAGDADLVPKLSRN 235

Query:   179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
             + +EG++ KTGPK  + +RKRWFT+D R+LMY ++PL A+ +GE+F+G    GYTV  G 
Sbjct:   236 YLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGF 295

Query:   239 PPGAKDQGFT--FTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
             PP  +   +    T+ TP R + F+  +  D+ +W+ A Q
Sbjct:   296 PPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQ 335

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|H7C2Q4 ADAP1 "Arf-GAP with dual PH domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 696 (250.1 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
 Identities = 125/280 (44%), Positives = 194/280 (69%)

Query:     1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
             M   GN+ ++ ++E +VP+ Y  PT S  Q+L ++WIR+KYER+EF +PE    Y  G+ 
Sbjct:     1 MASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQEPYSAGYR 60

Query:    60 DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHP 118
             +GFL KRG+++G++  R+FVL E    +KY+ + + KEPKA ++I  LN    P+KI HP
Sbjct:    61 EGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHP 120

Query:   119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRD 178
             H LQ+T++KD STR+I++YHE+ + I++W++A+R A+FH LQVAFP A D++LV  L+R+
Sbjct:   121 HGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGAGDADLVPKLSRN 180

Query:   179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
             + +EG++ KTGPK  + +RKRWFT+D R+LMY ++PL A+ +GE+F+G    GYTV  G 
Sbjct:   181 YLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGF 240

Query:   239 PPGAKDQGFT--FTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
             PP  +   +    T+ TP R + F+  +  D+ +W+ A Q
Sbjct:   241 PPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQ 280

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|O75689 ADAP1 "Arf-GAP with dual PH domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 696 (250.1 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
 Identities = 125/280 (44%), Positives = 194/280 (69%)

Query:     1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
             M   GN+ ++ ++E +VP+ Y  PT S  Q+L ++WIR+KYER+EF +PE    Y  G+ 
Sbjct:    73 MASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQEPYSAGYR 132

Query:    60 DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHP 118
             +GFL KRG+++G++  R+FVL E    +KY+ + + KEPKA ++I  LN    P+KI HP
Sbjct:   133 EGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHP 192

Query:   119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRD 178
             H LQ+T++KD STR+I++YHE+ + I++W++A+R A+FH LQVAFP A D++LV  L+R+
Sbjct:   193 HGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGAGDADLVPKLSRN 252

Query:   179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
             + +EG++ KTGPK  + +RKRWFT+D R+LMY ++PL A+ +GE+F+G    GYTV  G 
Sbjct:   253 YLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGF 312

Query:   239 PPGAKDQGFT--FTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
             PP  +   +    T+ TP R + F+  +  D+ +W+ A Q
Sbjct:   313 PPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQ 352

GO:0005543 "phospholipid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0032312 "regulation of ARF GTPase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0043087 "regulation of GTPase activity" evidence=IMP

GO:0008060 "ARF GTPase activator activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0043533 "inositol 1,3,4,5 tetrakisphosphate binding" evidence=TAS

GO:0007166 "cell surface receptor signaling pathway" evidence=TAS

UNIPROTKB|E2R2R3 ADAP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 685 (246.2 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
 Identities = 124/278 (44%), Positives = 194/278 (69%)

Query:     1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
             M   GN+V++  YE +VP  Y  PT S  Q+L ++WIR+KYER+EF HP+    Y  G+ 
Sbjct:    73 MASHGNDVARDTYESKVPPFYYRPTFSDCQLLREQWIRAKYERQEFTHPDKQEPYSAGYR 132

Query:    60 DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHP 118
             +GFL KRG+++G++  R+FVL E   ++KY+ + + KEPKA ++I  LN    P+KI HP
Sbjct:   133 EGFLWKRGRDNGQFLSRKFVLTEREGSLKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHP 192

Query:   119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRD 178
             H LQ+T++KD STR+I+VYHE+ + I++W++A+R A+FH LQVAFP A+D++LV  L+R+
Sbjct:   193 HGLQVTYLKDNSTRNIFVYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLSRN 252

Query:   179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
             + +EG++ KTGPK  + + KRWFT+D R+LMY ++PL A+ +GE+F+G    GYTV  G+
Sbjct:   253 YLKEGYMEKTGPKQTEGFGKRWFTMDDRRLMYFKDPLDAFARGEVFIGSRESGYTVLDGL 312

Query:   239 PPGAKDQGFT--FTLKTPQRWYQFSALSAPDRDQWIQA 274
             PP  +   +    T+ TP+R +  +  +  ++  W++A
Sbjct:   313 PPSTQGHHWPHGITIVTPERRFLLACETETEQRAWVEA 350

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0032312 "regulation of ARF GTPase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008060 "ARF GTPase activator activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|F1NK48 ADAP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 682 (245.1 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
 Identities = 126/280 (45%), Positives = 193/280 (68%)

Query:     1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
             M   GNNV+K KYE ++P  Y  PT    Q+L ++WIR+KYER+EF H E    Y  G+ 
Sbjct:    75 MASNGNNVAKAKYESKMPPFYYKPTFLDCQLLREQWIRAKYERKEFIHSEKQEPYSAGYR 134

Query:    60 DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHP 118
             +GFL KRG+++G++  R+FVL+E    +KY+ + + KEPKA ++I  LN    P+KI +P
Sbjct:   135 EGFLWKRGRDNGQFLSRKFVLSEREGALKYFNRNDAKEPKAIMKIEHLNATFQPAKIGNP 194

Query:   119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRD 178
             H LQ+T++KD STR+I+VYHE+ + I++W++AIR A+FH LQVAFP A+D++LV  L+R+
Sbjct:   195 HGLQITYLKDNSTRNIFVYHEDGKEIVDWFNAIRAARFHYLQVAFPGASDADLVPKLSRN 254

Query:   179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
             + +EG++ KTGPK  + ++KRWFT+D R+LMY ++PL A+ +GE+F+G   + Y V  G+
Sbjct:   255 YLKEGYMEKTGPKQTEGFKKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKENSYKVLEGL 314

Query:   239 PPGAKDQGFT--FTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
             PP  +   +    T+ TP R + F+  +  D+ +WI   Q
Sbjct:   315 PPSTQGNHWQHGITIVTPDRKFLFACETEDDQLEWITTFQ 354

GO:0005543 "phospholipid binding" evidence=IEA

GO:0008060 "ARF GTPase activator activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0032312 "regulation of ARF GTPase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|O02753 ADAP1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 676 (243.0 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
 Identities = 124/281 (44%), Positives = 197/281 (70%)

Query:     1 MKQIGNNVSKLKYEMRVPASYKVPTSS-CPQVLLKEWIRSKYEREEFRHPEALT-YITGH 58
             M   GN +++  +E RVP  Y  P++S CP +L ++WIR+KYER+EF HPE    Y  G+
Sbjct:    73 MASRGNAIARATFESRVPPFYYRPSASDCP-LLREQWIRAKYERQEFAHPERQEPYSAGY 131

Query:    59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEH 117
              +GFL KRG+++G++  R+FVL E    +KY+ + + KEPKA ++I  LN    P+KI H
Sbjct:   132 REGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRSDAKEPKAVMKIEHLNATFQPAKIGH 191

Query:   118 PHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTR 177
             PH LQ+T++KD STR+I+VYHE+ + +++W++A+R A+FH LQVAFP A++++LV  L+R
Sbjct:   192 PHGLQVTYLKDNSTRNIFVYHEDGKEMVDWFNALRAARFHYLQVAFPGASNADLVPKLSR 251

Query:   178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLG 237
             ++ +EG++ KTGPK  + +RKRWFT+D R+LMY ++PL A+ +GE+F+G    GYTV  G
Sbjct:   252 NYLQEGYMEKTGPKT-EGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSRESGYTVLDG 310

Query:   238 VPPGAKDQGFT--FTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
             +PP  +   +    T+ TP+R +  +  +  ++  W++A+Q
Sbjct:   311 LPPSTQGHHWPHGITIVTPERRFLLACETESEQRAWMEALQ 351

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0032312 "regulation of ARF GTPase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008060 "ARF GTPase activator activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O75689	ADAP1_HUMAN	No assigned EC number	0.4464	0.8598	0.7379	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	321
cd13252	125	cd13252, PH1_ADAP, ArfGAP with dual PH domains Ple	1e-61
cd01251	105	cd01251, PH2_ADAP, ArfGAP with dual PH domains Ple	6e-48
cd13288	120	cd13288, PH_Ses, Sesquipedalian family Pleckstrin	6e-13
cd13253	93	cd13253, PH1_ARAP, ArfGAP with RhoGAP domain, anky	7e-12
smart00233	102	smart00233, PH, Pleckstrin homology domain	7e-12
pfam00169	101	pfam00169, PH, PH domain	1e-11
cd01235	106	cd01235, PH_Sbf1_hMTMR5, Set binding factor 1 (als	1e-10
cd00821	92	cd00821, PH, Pleckstrin homology (PH) domain	1e-09
cd13273	110	cd13273, PH_SWAP-70, Switch-associated protein-70	2e-08
cd01265	101	cd01265, PH_TBC1D2A, TBC1 domain family member 2A	2e-08
cd13248	104	cd13248, PH_PEPP1_2_3, Phosphoinositol 3-phosphate	3e-08
cd13276	117	cd13276, PH_AtPH1, Arabidopsis thaliana Pleckstrin	6e-08
cd13275	103	cd13275, PH_M-RIP, Myosin phosphatase-RhoA Interac	3e-07
cd01252	118	cd01252, PH_GRP1-like, General Receptor for Phosph	6e-07
cd13296	111	cd13296, PH2_MyoX, Myosin X Pleckstrin homology (P	6e-07
cd13272	116	cd13272, PH_INPP4A_INPP4B, Type I inositol 3,4-bis	9e-07
cd13282	96	cd13282, PH1_PLEKHH1_PLEKHH2, Pleckstrin homology	2e-06
smart00233	102	smart00233, PH, Pleckstrin homology domain	3e-06
pfam00169	101	pfam00169, PH, PH domain	5e-06
pfam01412	117	pfam01412, ArfGap, Putative GTPase activating prot	5e-06
cd13261	136	cd13261, PH_RasGRF1_2, Ras-specific guanine nucleo	9e-05
cd00821	92	cd00821, PH, Pleckstrin homology (PH) domain	1e-04
cd13255	110	cd13255, PH_TAAP2-like, Tandem PH-domain-containin	1e-04
cd13267	125	cd13267, PH_DOCK-D, Dedicator of cytokinesis-D sub	1e-04
cd13324	103	cd13324, PH_Gab-like, Grb2-associated binding prot	1e-04
cd13215	130	cd13215, PH-GRAM1_AGT26, Autophagy-related protein	2e-04
cd13250	98	cd13250, PH_ACAP, ArfGAP with coiled-coil, ankyrin	3e-04
cd13266	106	cd13266, PH_Skap_family, Src kinase-associated pho	4e-04
cd13308	113	cd13308, PH_3BP2, SH3 domain-binding protein 2 Ple	4e-04
cd10573	96	cd10573, PH_DAPP1, Dual Adaptor for Phosphotyrosin	4e-04
cd01250	114	cd01250, PH_AGAP, Arf-GAP with GTPase, ANK repeat	5e-04
cd13256	110	cd13256, PH3_ARAP, ArfGAP with RhoGAP domain, anky	0.001
cd13297	123	cd13297, PH3_MyoX-like, Myosin X-like Pleckstrin h	0.003
cd13288	120	cd13288, PH_Ses, Sesquipedalian family Pleckstrin	0.004

>gnl|CDD|241406 cd13252, PH1_ADAP, ArfGAP with dual PH domains Pleckstrin homology (PH) domain, repeat 1

 Score =  191 bits (488), Expect = 1e-61
 Identities = 66/124 (53%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 48  HPEALTYITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKE-KKEPKATLRISEL 106
             +   Y++G  +GFL KRGK++ ++  R+FVL+E   T+KY+VKE  KEPKA + I EL
Sbjct: 2   GVKQQPYLSGSKEGFLWKRGKDNNQFKQRKFVLSEREGTLKYFVKEDAKEPKAVISIKEL 61

Query: 107 NVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSA 166
           N V  P KI HP+ LQ+T++KDGSTR+I+VYHE+ + I++WY+AIR A+ H LQVAFP A
Sbjct: 62  NAVFQPEKIGHPNGLQITYLKDGSTRNIFVYHEDGKEIVDWYNAIRAARLHYLQVAFPGA 121

Query: 167 NDSE 170
           +D E
Sbjct: 122 SDEE 125

ADAP (also called centaurin alpha) is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. This cd contains the first PH domain repeat. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 125

>gnl|CDD|241282 cd01251, PH2_ADAP, ArfGAP with dual PH domains Pleckstrin homology (PH) domain, repeat 2

 Score =  156 bits (396), Expect = 6e-48
 Identities = 56/101 (55%), Positives = 72/101 (71%), Gaps = 1/101 (0%)

Query: 178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLG 237
           DF +EG+L KTGPK  D +RKRWFTLD R+LMY ++PL A+PKGEIF+G   +GY+VR G
Sbjct: 1   DFLKEGYLEKTGPKQTDGFRKRWFTLDDRRLMYFKDPLDAFPKGEIFIGSKEEGYSVREG 60

Query: 238 VPPGAKD-QGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
           +P G K   GF FTL TP R +  SA +  +R +WI A+Q 
Sbjct: 61  LPAGIKGHWGFGFTLVTPDRTFVLSAETEEERREWITAIQK 101

ADAP (also called centaurin alpha) is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. This cd contains the second PH domain repeat. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 105

>gnl|CDD|241442 cd13288, PH_Ses, Sesquipedalian family Pleckstrin homology (PH) domain

 Score = 64.2 bits (157), Expect = 6e-13
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 12/99 (12%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           +EG+LWK G +N  +Y+KRWF L    L Y E+     P G I L    +G TV L    
Sbjct: 10  KEGYLWKKGERN-TSYQKRWFVLKGNLLFYFEKKGDREPLGVIVL----EGCTVEL---- 60

Query: 241 GAKDQGFTFTLKTP---QRWYQFSALSAPDRDQWIQAVQ 276
              ++ + F ++      R Y  +A S  D + W++A+ 
Sbjct: 61  SEDEEPYAFAIRFDGPGSRSYVLAAESQEDMESWMKALS 99

The sesquipedalian family has 2 mammalian members: Ses1 and Ses2, which are also callled 7 kDa inositol polyphosphate phosphatase-interacting protein 1 and 2. They play a role in endocytic trafficking and are required for receptor recycling from endosomes, both to the trans-Golgi network and the plasma membrane. Members of this family form homodimers and heterodimers. Sesquipedalian interacts with inositol polyphosphate 5-phosphatase OCRL-1 (INPP5F) also known as Lowe oculocerebrorenal syndrome protein, a phosphatase enzyme that is involved in actin polymerization and is found in the trans-Golgi network and INPP5B. Sesquipedalian contains a single PH domain. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 120

>gnl|CDD|241407 cd13253, PH1_ARAP, ArfGAP with RhoGAP domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain, repeat 1

 Score = 60.4 bits (147), Expect = 7e-12
 Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 10/96 (10%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           + GWL K  P+    ++KRW   D   L Y       Y KG I L   S   TVR     
Sbjct: 2   KSGWLDKLSPQGNYVFQKRWVVFDGDSLRYFNSEKEMYSKGIIPL---SSIKTVRS---- 54

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
              D    F + T  R + F A S  +R+ W+  + 
Sbjct: 55  -VGDN--KFEVVTGNRTFVFRAESEDERNLWVSTLM 87

ARAP proteins (also called centaurin delta) are phosphatidylinositol 3,4,5-trisphosphate-dependent GTPase-activating proteins that modulate actin cytoskeleton remodeling by regulating ARF and RHO family members. They bind phosphatidylinositol 3,4,5-trisphosphate (PtdIns(3,4,5)P3) and phosphatidylinositol 3,4-bisphosphate (PtdIns(3,4,5)P2) binding. There are 3 mammalian ARAP proteins: ARAP1, ARAP2, and ARAP3. All ARAP proteins contain a N-terminal SAM (sterile alpha motif) domain, 5 PH domains, an ArfGAP domain, 2 ankyrin domain, A RhoGap domain, and a Ras-associating domain. This hierarchy contains the first PH domain in ARAP. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 93

>gnl|CDD|214574 smart00233, PH, Pleckstrin homology domain

 Score = 60.6 bits (147), Expect = 7e-12
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAY---PKGEIFLGHCSDGYTVRLG 237
           +EGWL+K       +++KR+F L    L+Y++         PKG I L     G TVR  
Sbjct: 3   KEGWLYKKSGGGKKSWKKRYFVLFNSTLLYYKSKKDKKSYKPKGSIDL----SGCTVREA 58

Query: 238 VPPGAKDQGFTFTLKTPQR-WYQFSALSAPDRDQWIQAVQ 276
             P +  +   F +KT  R      A S  +R++W++A++
Sbjct: 59  PDPDSSKKPHCFEIKTSDRKTLLLQAESEEEREKWVEALR 98

Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. Length = 102

>gnl|CDD|215766 pfam00169, PH, PH domain

 Score = 60.2 bits (146), Expect = 1e-11
 Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 7/99 (7%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAY--PKGEIFLGHCSDGYTVRLGV 238
           +EGWL K G     +++KR+F L    L+Y+++   +   PKG I L     G  V    
Sbjct: 3   KEGWLLKKGSGGRKSWKKRYFVLFDGVLLYYKDSKKSSSRPKGSIPL----SGCQVTKVP 58

Query: 239 PPGAKDQGFTFTLKTPQRW-YQFSALSAPDRDQWIQAVQ 276
                 +   F ++T  R  +   A S  +R +W++A++
Sbjct: 59  DSEDGKRKNCFEIRTGDRETFLLQAESEEERKEWVKAIR 97

PH stands for pleckstrin homology. Length = 101

>gnl|CDD|241268 cd01235, PH_Sbf1_hMTMR5, Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain

 Score = 57.3 bits (139), Expect = 1e-10
 Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 4/100 (4%)

Query: 182 EGWLWKTGPKNADAYRKRWFTLDYRK--LMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV- 238
           EG+L+K G      +++RWF LD  K  L Y+E       KG I L      Y     + 
Sbjct: 6   EGYLYKRGAL-LKGWKQRWFVLDLTKHQLRYYESKEDTKCKGVIDLQEVESVYPDTPSIG 64

Query: 239 PPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTG 278
            P + D G  F LKT +R Y F A SA    QWI  +QT 
Sbjct: 65  APKSPDPGAFFELKTNKRVYYFLAPSAEAAQQWIDVIQTL 104

Sbf1 is a myotubularin-related pseudo-phosphatase. Both Sbf1 and myotubularin interact with the SET domains of Hrx and other epigenetic regulatory proteins, but Sbf1 lacks phosphatase activity due to several amino acid changes in its structurally preserved catalytic pocket. It contains pleckstrin (PH), GEF, and myotubularin homology domains that are thought to be responsible for signaling and growth control. Sbf1 functions as an inhibitor of cellular growth. The N-terminal GEF homology domain serves to inhibit the transforming effects of Sbf1. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 106

>gnl|CDD|241231 cd00821, PH, Pleckstrin homology (PH) domain

 Score = 54.3 bits (130), Expect = 1e-09
 Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMY--HEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
           +EGWL K G K   +++KRWF L    L+Y   ++  S  PKG I L   SDG  V L V
Sbjct: 1   KEGWLKKRGGKGLKSWKKRWFVLFDDVLLYYKSKKDSSKKPKGLIPL---SDGLEVEL-V 56

Query: 239 PPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQA 274
               K   F        R Y   A S  +R++W++A
Sbjct: 57  SSSGKPNCFELVTPDRGRTYYLQAESEEEREEWLEA 92

PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 92

>gnl|CDD|241427 cd13273, PH_SWAP-70, Switch-associated protein-70 Pleckstrin homology (PH) domain

 Score = 51.1 bits (123), Expect = 2e-08
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 6/101 (5%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           ++G+LWK G      +R+RWF L    L Y++       KGEI L    D     +   P
Sbjct: 10  KKGYLWKKGHLLPT-WRERWFVLKPNSLSYYKSEDLKEKKGEIAL----DSNC-CVESLP 63

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTF 281
             + +   F +KTP + Y+ SA     R +WIQA+QT    
Sbjct: 64  DREGKKCRFCVKTPDKTYELSASDHKTRQEWIQAIQTAIRL 104

SWAP-70 (also called Differentially expressed in FDCP 6/DEF-6 or IRF4-binding protein) functions in cellular signal transduction pathways (in conjunction with Rac), regulates cell motility through actin rearrangement, and contributes to the transformation and invasion activity of mouse embryo fibroblasts. Metazoan SWAP-70 is found in B lymphocytes, mast cells, and in a variety of organs. Metazoan SWAP-70 contains an N-terminal EF-hand motif, a centrally located PH domain, and a C-terminal coiled-coil domain. The PH domain of Metazoan SWAP-70 contains a phosphoinositide-binding site and a nuclear localization signal (NLS), which localize SWAP-70 to the plasma membrane and nucleus, respectively. The NLS is a sequence of four Lys residues located at the N-terminus of the C-terminal a-helix; this is a unique characteristic of the Metazoan SWAP-70 PH domain. The SWAP-70 PH domain binds PtdIns(3,4,5)P3 and PtdIns(4,5)P2 embedded in lipid bilayer vesicles. There are additional plant SWAP70 proteins, but these are not included in this hierarchy. Rice SWAP70 (OsSWAP70) exhibits GEF activity toward the its Rho GTPase, OsRac1, and regulates chitin-induced production of reactive oxygen species and defense gene expression in rice. Arabidopsis SWAP70 (AtSWAP70) plays a role in both PAMP- and effector-triggered immunity. Plant SWAP70 contains both DH and PH domains, but their arrangement is the reverse of that in typical DH-PH-type Rho GEFs, wherein the DH domain is flanked by a C-terminal PH domain. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 110

>gnl|CDD|241296 cd01265, PH_TBC1D2A, TBC1 domain family member 2A pleckstrin homology (PH) domain

 Score = 50.7 bits (122), Expect = 2e-08
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 16/88 (18%)

Query: 195 AYRKRWFTLDYRK--LMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLK 252
            ++ RWF  D RK  L Y+  P    P G I L   +  Y          + +  TF + 
Sbjct: 17  TWKSRWFVFDERKCQLYYYRSPQDITPLGSIDLSGAAFSYD--------PEAEKGTFEIH 68

Query: 253 TPQRWYQFSALSAPDRDQ---WIQAVQT 277
           TP R Y    L A DR     W+Q +Q+
Sbjct: 69  TPGRVY---ILKASDRQAMLYWLQELQS 93

TBC1D2A (also called PARIS-1/Prostate antigen recognized and identified by SEREX 1 and ARMUS) contains a PH domain and a TBC-type GTPase catalytic domain. TBC1D2A integrates signaling between Arf6, Rac1, and Rab7 during junction disassembly. Activated Rac1 recruits TBC1D2A to locally inactivate Rab7 via its C-terminal TBC/RabGAP domain and facilitate E-cadherin degradation in lysosomes. The TBC1D2A PH domain mediates localization at cell-cell contacts and coprecipitates with cadherin complexes. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 101

>gnl|CDD|241402 cd13248, PH_PEPP1_2_3, Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain

 Score = 50.3 bits (121), Expect = 3e-08
 Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 11/96 (11%)

Query: 183 GWLWK---TGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
           GWL K   +G KN   ++KRWF L    L Y+++P      G I L      YT+    P
Sbjct: 11  GWLHKQGGSGLKN---WKKRWFVLKDNCLYYYKDPEEEKALGSILL----PSYTISPASP 63

Query: 240 PGAKDQGFTFTL-KTPQRWYQFSALSAPDRDQWIQA 274
               ++ F F       R Y F+A +  + +QW++A
Sbjct: 64  SDEINRKFAFKAEHAGMRTYYFAADTQEEMEQWMKA 99

PEPP1 (also called PLEKHA4/PH domain-containing family A member 4 and RHOXF1/Rhox homeobox family member 1), and related homologs PEPP2 (also called PLEKHA5/PH domain-containing family A member 5) and PEPP3 (also called PLEKHA6/PH domain-containing family A member 6), have PH domains that interact specifically with PtdIns(3,4)P3. Other proteins that bind PtdIns(3,4)P3 specifically are: TAPP1 (tandem PH-domain-containing protein-1) and TAPP2], PtdIns3P AtPH1, and Ptd- Ins(3,5)P2 (centaurin-beta2). All of these proteins contain at least 5 of the 6 conserved amino acids that make up the putative phosphatidylinositol 3,4,5- trisphosphate-binding motif (PPBM) located at their N-terminus. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 104

>gnl|CDD|241430 cd13276, PH_AtPH1, Arabidopsis thaliana Pleckstrin homolog (PH) 1 (AtPH1) PH domain

 Score = 50.0 bits (120), Expect = 6e-08
 Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 11/103 (10%)

Query: 177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEP-LSAYPKGEIFLGHCSDGYTVR 235
            D  + GWL K G      +R+RWF L   KL Y ++    + P+G I L  C       
Sbjct: 5   SDPEKAGWLTKQGGSIKT-WRRRWFVLKQGKLFYFKDEDPDSEPRGVIDLSDC------- 56

Query: 236 LGVPPGAKDQG--FTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
           L V    +     F F + TP+R +   A S  ++++WI A+ 
Sbjct: 57  LTVKSAEEATNKEFAFEVSTPERTFYLIADSEKEKEEWISAIG 99

AtPH1 is expressed in all plant tissue and is proposed to be the plant homolog of human pleckstrin. Pleckstrin consists of two PH domains separated by a linker region, while AtPH has a single PH domain with a short N-terminal extension. AtPH1 binds PtdIns3P specifically and is thought to be an adaptor molecule since it has no obvious catalytic functions. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 117

>gnl|CDD|241429 cd13275, PH_M-RIP, Myosin phosphatase-RhoA Interacting Protein Pleckstrin homology (PH) domain

 Score = 47.7 bits (114), Expect = 3e-07
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 11/99 (11%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPL---SAYPKGEIFLGHCSDGYTVRLG 237
           ++GWL K        ++K WF L    L Y+ + +   +    G I L  C++   +   
Sbjct: 1   KKGWLMKQD--EDGEWKKHWFVLRDASLRYYRDSVAEEAGELDGVIDLSTCTNVTEL--- 55

Query: 238 VPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
             P  ++ GF       +R Y  SA+++  R  WIQA++
Sbjct: 56  --PVQRNYGFQIKTWDGKR-YVLSAMTSGIRRNWIQAIR 91

M-RIP is proposed to play a role in myosin phosphatase regulation by RhoA. M-RIP contains 2 PH domains followed by a Rho binding domain (Rho-BD), and a C-terminal myosin binding subunit (MBS) binding domain (MBS-BD). The amino terminus of M-RIP with its adjacent PH domains and polyproline motifs mediates binding to both actin and Galpha. M-RIP brings RhoA and MBS into close proximity where M-RIP can target RhoA to the myosin phosphatase complex to regulate the myosin phosphorylation state. M-RIP does this via its C-terminal coiled-coil domain which interacts with the MBS leucine zipper domain of myosin phosphatase, while its Rho-BD, directly binds RhoA in a nucleotide-independent manner. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 103

>gnl|CDD|241283 cd01252, PH_GRP1-like, General Receptor for Phosphoinositides-1-like Pleckstrin homology (PH) domain

 Score = 47.3 bits (113), Expect = 6e-07
 Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 22/132 (16%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           REGWL K G +   ++++RWF L    L Y E      P+G I L    +  +VR  V  
Sbjct: 5   REGWLLKLGGR-VKSWKRRWFILTDNCLYYFEYTTDKEPRGIIPL----ENLSVRE-VED 58

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQR-WYQFSALSAPD 299
             K   F F L                 ++ I+A +T     +       Y+ SA +  +
Sbjct: 59  SKKP--FCFEL-------------YSPSNEVIKACKTDSDGKVVEGNHTVYRISAATEEE 103

Query: 300 RDQWIQAVQTVL 311
            D+WI++++  +
Sbjct: 104 MDEWIKSIKASI 115

GRP1/cytohesin3 and the related proteins ARNO (ARF nucleotide-binding site opener)/cytohesin-2 and cytohesin-1 are ARF exchange factors that contain a pleckstrin homology (PH) domain thought to target these proteins to cell membranes through binding polyphosphoinositides. The PH domains of all three proteins exhibit relatively high affinity for PtdIns(3,4,5)P3. Within the Grp1 family, diglycine (2G) and triglycine (3G) splice variants, differing only in the number of glycine residues in the PH domain, strongly influence the affinity and specificity for phosphoinositides. The 2G variants selectively bind PtdIns(3,4,5)P3 with high affinity,the 3G variants bind PtdIns(3,4,5)P3 with about 30-fold lower affinity and require the polybasic region for plasma membrane targeting. These ARF-GEFs share a common, tripartite structure consisting of an N-terminal coiled-coil domain, a central domain with homology to the yeast protein Sec7, a PH domain, and a C-terminal polybasic region. The Sec7 domain is autoinhibited by conserved elements proximal to the PH domain. GRP1 binds to the DNA binding domain of certain nuclear receptors (TRalpha, TRbeta, AR, ER, but not RXR), and can repress thyroid hormone receptor (TR)-mediated transactivation by decreasing TR-complex formation on thyroid hormone response elements. ARNO promotes sequential activation of Arf6, Cdc42 and Rac1 and insulin secretion. Cytohesin acts as a PI 3-kinase effector mediating biological responses including cell spreading and adhesion, chemotaxis, protein trafficking, and cytoskeletal rearrangements, only some of which appear to depend on their ability to activate ARFs. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 118

>gnl|CDD|241450 cd13296, PH2_MyoX, Myosin X Pleckstrin homology (PH) domain, repeat 2

 Score = 47.0 bits (112), Expect = 6e-07
 Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 13/97 (13%)

Query: 183 GWLWK-TGPKNA---DAYRKRWFTLDYRKLMYHE-EPLSAYPKGEIFLGHCSDGYTVRLG 237
           GWL+K  G  +      ++ RWF L    L Y+E +   A   G I +    +       
Sbjct: 11  GWLYKKGGGSSTLSRKNWKSRWFVLRDTVLKYYENDQEGAKALGTIDIRSAKE------I 64

Query: 238 VPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQA 274
           V    K+ GF  T  TP R Y F A S  D  QW   
Sbjct: 65  VDNTPKENGFDIT--TPSRTYHFVAESPEDASQWFSV 99

MyoX, a MyTH-FERM myosin, is a molecular motor that has crucial functions in the transport and/or tethering of integrins in the actin-based extensions known as filopodia, microtubule binding, and in netrin-mediated axon guidance. It functions as a dimer. MyoX walks on bundles of actin, rather than single filaments, unlike the other unconventional myosins. MyoX is present in organisms ranging from humans to choanoflagellates, but not in Drosophila and Caenorhabditis elegans.MyoX consists of a N-terminal motor/head region, a neck made of 3 IQ motifs, and a tail consisting of a coiled-coil domain, a PEST region, 3 PH domains, a myosin tail homology 4 (MyTH4), and a FERM domain at its very C-terminus. The first PH domain in the MyoX tail is a split-PH domain, interupted by the second PH domain such that PH 1a and PH 1b flanks PH 2. The third PH domain (PH 3) follows the PH 1b domain. This cd contains the second PH repeat. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 111

>gnl|CDD|241426 cd13272, PH_INPP4A_INPP4B, Type I inositol 3,4-bisphosphate 4-phosphatase and Type II inositol 3,4-bisphosphate 4-phosphatase Pleckstrin homology (PH) domain

 Score = 46.8 bits (112), Expect = 9e-07
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 9/91 (9%)

Query: 189 GPKNADAYRKRWFTLDYRKLMYHE--EPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQG 246
             + ++ +++RWF L    L Y +  EP S  P G I L +C     V+    P      
Sbjct: 8   FFRKSEVFKERWFKLRGNLLFYFKSNEPGSE-PAGVIVLENC----RVQRE-EPDPGGFA 61

Query: 247 FTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
           F+   K  ++ Y+FS  S  +RD+WI+A++ 
Sbjct: 62  FSLVFKDEKK-YRFSCRSEEERDEWIEAIKQ 91

INPP4A (also called Inositol polyphosphate 4-phosphatase type I) and INPP4B (also called Inositol polyphosphate 4-phosphatase type II) both catalyze the hydrolysis of the 4-position phosphate of phosphatidylinositol 3,4-bisphosphate and inositol 1,3,4-trisphosphate. They differ in that INPP4A additionally catalyzes the hydrolysis of the 4-position phosphate of inositol 3,4-bisphosphate, while INPP4B catalyzes the hydrolysis of the 4-position phosphate of inositol 1,4-bisphosphate. They both have a single PH domain followed by a C2 domain. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 116

>gnl|CDD|241436 cd13282, PH1_PLEKHH1_PLEKHH2, Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 12/99 (12%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMY--HEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
           + G+L K G K    +++RWF L   +L Y      +   P+G+I L    DG       
Sbjct: 1   KAGYLTKLGGKVK-TWKRRWFVLKNGELFYYKSPNDVIRKPQGQIAL----DGSCEIA-- 53

Query: 239 PPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
                 Q  TF + T +R Y  +A S  D D+WI+ +Q 
Sbjct: 54  -RAEGAQ--TFEIVTEKRTYYLTADSENDLDEWIRVIQN 89

PLEKHH1 and PLEKHH2 (also called PLEKHH1L) are thought to function in phospholipid binding and signal transduction. There are 3 Human PLEKHH genes: PLEKHH1, PLEKHH2, and PLEKHH3. There are many isoforms, the longest of which contain a FERM domain, a MyTH4 domain, two PH domains, a peroximal domain, a vacuolar domain, and a coiled coil stretch. The FERM domain has a cloverleaf tripart structure (FERM_N, FERM_M, FERM_C/N, alpha-, and C-lobe/A-lobe, B-lobe, C-lobe/F1, F2, F3). The C-lobe/F3 within the FERM domain is part of the PH domain family. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 96

>gnl|CDD|214574 smart00233, PH, Pleckstrin homology domain

 Score = 44.8 bits (106), Expect = 3e-06
 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 14/104 (13%)

Query: 59  MDGFLMKRGKESGK-YHPRRFVLNEINDTIKYYVKEKK----EPKATLRISELNVVIAP- 112
            +G+L K+     K +  R FVL   N T+ YY  +K     +PK ++ +S   V  AP 
Sbjct: 3   KEGWLYKKSGGGKKSWKKRYFVLF--NSTLLYYKSKKDKKSYKPKGSIDLSGCTVREAPD 60

Query: 113 -SKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNA 154
               + PH  ++      S R   +   ES+     W  A+R A
Sbjct: 61  PDSSKKPHCFEIKT----SDRKTLLLQAESEEEREKWVEALRKA 100

Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. Length = 102

>gnl|CDD|215766 pfam00169, PH, PH domain

 Score = 44.4 bits (105), Expect = 5e-06
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 13/104 (12%)

Query: 58  HMDGFLMKRGKESGK-YHPRRFVLNEINDTIKYY---VKEKKEPKATLRISELNVVIAPS 113
             +G+L+K+G    K +  R FVL   +  + YY    K    PK ++ +S   V   P 
Sbjct: 2   IKEGWLLKKGSGGRKSWKKRYFVLF--DGVLLYYKDSKKSSSRPKGSIPLSGCQVTKVPD 59

Query: 114 --KIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNA 154
               +  +  ++        R  ++   ES+     W  AIR+A
Sbjct: 60  SEDGKRKNCFEIRT----GDRETFLLQAESEEERKEWVKAIRSA 99

PH stands for pleckstrin homology. Length = 101

>gnl|CDD|216485 pfam01412, ArfGap, Putative GTPase activating protein for Arf

 Score = 44.5 bits (106), Expect = 5e-06
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE 50
           MK  GN  +   +E  +P     P+SS  +   + +IR+KY  + F   E
Sbjct: 69  MKAGGNKRANEFWEANLPPPKPPPSSSDREKR-ESFIRAKYVEKLFAEAE 117

Putative zinc fingers with GTPase activating proteins (GAPs) towards the small GTPase, Arf. The GAP of ARD1 stimulates GTPase hydrolysis for ARD1 but not ARFs. Length = 117

>gnl|CDD|241415 cd13261, PH_RasGRF1_2, Ras-specific guanine nucleotide-releasing factors 1 and 2 Pleckstrin homology (PH) domain

 Score = 41.2 bits (97), Expect = 9e-05
 Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 18/119 (15%)

Query: 177 RDFGREGWLWKTGPKNADAYR--KRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTV 234
           +D  R G+L K   K++D  +   +WF L    L Y E   S+ P G   L  C   Y  
Sbjct: 3   KDGTRRGYLSK---KSSDNSKWHTKWFALYQNLLFYFENESSSRPSGLYLLEGC---YCE 56

Query: 235 RLGVPPGA--------KDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAV-QTGFTFTL 283
           R   P  A        K   FT + +   QR Y+    +  D D W++A+ Q  ++  L
Sbjct: 57  RAPSPKRAGKGKDHLEKQHYFTISFRHENQRQYELRTETETDCDTWVEAIKQASYSKLL 115

RasGRF1 (also called GRF1; CDC25Mm/Ras-specific nucleotide exchange factor CDC25; GNRP/Guanine nucleotide-releasing protein) and RasGRF2 (also called GRF2; Ras guanine nucleotide exchange factor 2) are a family of guanine nucleotide exchange factors (GEFs). They both promote the exchange of Ras-bound GDP by GTP, thereby regulating the RAS signaling pathway. RasGRF1 and RasGRF2 form homooligomers and heterooligomers. GRF1 has 3 isoforms and GRF2 has 2 isoforms. The longest isoforms of RasGRF1 and RasGRF2 contain the following domains: a Rho-GEF domain sandwiched between 2 PH domains, IQ domains, a REM (Ras exchanger motif) domain, and a Ras-GEF domainwhich gives them the capacity to activate both Ras and Rac GTPases in response to signals from a variety of neurotransmitter receptors. Their IQ domains allow them to act as calcium sensors to mediate the actions of NMDA-type and calcium-permeable AMPA-type glutamate receptors. GRF1 also mediates the action of dopamine receptors that signal through cAMP. GRF1 and GRF2 play strikingly different roles in regulating MAP kinase family members, neuronal synaptic plasticity, specific forms of learning and memory, and behavioral responses to psychoactive drugs. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 136

>gnl|CDD|241231 cd00821, PH, Pleckstrin homology (PH) domain

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 10/97 (10%)

Query: 59  MDGFLMKRG-KESGKYHPRRFVLNEINDTIKYYVKEK---KEPKATLRISELNVVIAPSK 114
            +G+L KRG K    +  R FVL   +D + YY  +K   K+PK  + +S+   V   S 
Sbjct: 1   KEGWLKKRGGKGLKSWKKRWFVLF--DDVLLYYKSKKDSSKKPKGLIPLSDGLEVELVSS 58

Query: 115 IEHPHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHA 150
              P+  +L     G T   Y    ES+     W  A
Sbjct: 59  SGKPNCFELVTPDRGRT---YYLQAESEEEREEWLEA 92

PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 92

>gnl|CDD|241409 cd13255, PH_TAAP2-like, Tandem PH-domain-containing protein 2 Pleckstrin homology (PH) domain

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 17/100 (17%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEP-----LSAYPKGEIFLGHCSDGYTVR 235
           + G+L K G +    ++KRWF L   KL Y++       L      +I        +T  
Sbjct: 8   KAGYLEKKGERR-KTWKKRWFVLRPTKLAYYKNDKEYRLLRLIDLTDI--------HTC- 57

Query: 236 LGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAV 275
                  K    TF + TP R +   A S  + + WI A+
Sbjct: 58  --TEVQLKKHDNTFGIVTPARTFYVQADSKAEMESWISAI 95

The binding of TAPP2 (also called PLEKHA2) adaptors to PtdIns(3,4)P(2), but not PI(3,4, 5)P3, function as negative regulators of insulin and PI3K signalling pathways (i.e. TAPP/utrophin/syntrophin complex). TAPP2 contains two sequential PH domains in which the C-terminal PH domain specifically binds PtdIns(3,4)P2 with high affinity. The N-terminal PH domain does not interact with any phosphoinositide tested. They also contain a C-terminal PDZ-binding motif that interacts with several PDZ-binding proteins, including PTPN13 (known previously as PTPL1 or FAP-1) as well as the scaffolding proteins MUPP1 (multiple PDZ-domain-containing protein 1), syntrophin and utrophin. The members here are most sequence similar to TAPP2 proteins, but may not be actual TAPP2 proteins. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 110

>gnl|CDD|241421 cd13267, PH_DOCK-D, Dedicator of cytokinesis-D subfamily Pleckstrin homology (PH) domain

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 22/111 (19%)

Query: 181 REGWLWKTGPKNAD--------AYRKRWFTL-----DYRKLMYHEEPLSAYPKGEIFLGH 227
           +EG+L+K GP+N+         ++++R+F L         L ++++  S   KG I+L  
Sbjct: 8   KEGYLYK-GPENSSMFISLAMKSFKRRFFHLKQLVDGSYILEFYKDEKSKEAKGTIYLDS 66

Query: 228 CSDGYTVRLGVPPGAKDQGFTFTLK-TPQRWYQFSALSAPDRDQWIQAVQT 277
           C+       GV   +K + F F L+    + Y  +A S  + D WI  +  
Sbjct: 67  CT-------GVVQNSKRRKFCFELRMQDGKSYVLAAESESEMDDWISKLNK 110

DOCK-D subfamily (also called Zizimin subfamily) consists of Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2. DOCK-D has a N-terminal DUF3398 domain, a PH-like domain, a Dock Homology Region 1, DHR1 (also called CZH1), a C2 domain, and a C-terminal DHR2 domain (also called CZH2). Zizimin1 is enriched in the brain, lung, and kidney; zizimin2 is found in B and T lymphocytes, and zizimin3 is enriched in brain, lung, spleen and thymus. Zizimin1 functions in autoinhibition and membrane targeting. Zizimin2 is an immune-related and age-regulated guanine nucleotide exchange factor, which facilitates filopodial formation through activation of Cdc42, which results in activation of cell migration. No function has been determined for Zizimin3 to date. The N-terminal half of zizimin1 binds to the GEF domain through three distinct areas, including CZH1, to inhibit the interaction with Cdc42. In addition its PH domain binds phosphoinositides and mediates zizimin1 membrane targeting. DOCK is a family of proteins involved in intracellular signalling networks. They act as guanine nucleotide exchange factors for small G proteins of the Rho family, such as Rac and Cdc42. There are 4 subfamilies of DOCK family proteins based on their sequence homology: A-D. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 125

>gnl|CDD|241478 cd13324, PH_Gab-like, Grb2-associated binding protein family Pleckstrin homology (PH) domain

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 15/104 (14%)

Query: 181 REGWLWKTGPK---NADAYRKRWFTL-------DYRKLMYHEEPLSAYPKGEIFLGHCSD 230
            EGWL K+ P+      A++KRWF L       D   L Y+++     P G I L  C  
Sbjct: 1   YEGWLRKSPPEKKIKRAAWKKRWFVLRSGRLSGDPDVLEYYKDDHCKKPIGAIDLDECEQ 60

Query: 231 GYTVRLGVPPGAKDQ--GFTFTLKTPQRWYQFSALSAPDRDQWI 272
              V  G+    K+    F F + TP+R Y   A +  + ++W+
Sbjct: 61  ---VDAGLTFEYKEFKNQFIFDIVTPKRTYYLVAETEEEMNKWV 101

Gab proteins are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. There are 3 families: Gab1, Gab2, and Gab3. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 103

>gnl|CDD|241369 cd13215, PH-GRAM1_AGT26, Autophagy-related protein 26/Sterol 3-beta-glucosyltransferase Pleckstrin homology (PH) domain, repeat 1

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 8/97 (8%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAY-PKGEIFLGHCSDGYTVRLGVP 239
           + G+L K G +    Y + WF L    L ++      Y P G I L +            
Sbjct: 31  KSGYLSKRGKRTP-RYNRYWFVLKGDVLSWYRSSTDLYFPHGTIDLRYGISAEITDKDKE 89

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
                    F + T  R Y F A S P   +W++A+Q
Sbjct: 90  T------THFKITTNSRTYTFKADSEPSAKEWVKALQ 120

ATG26 (also called UGT51/UDP-glycosyltransferase 51), a member of the glycosyltransferase 28 family, resulting in the biosynthesis of sterol glucoside. ATG26 in decane metabolism and autophagy. There are 32 known autophagy-related (ATG) proteins, 17 are components of the core autophagic machinery essential for all autophagy-related pathways and 15 are the additional components required only for certain pathways or species. The core autophagic machinery includes 1) the ATG9 cycling system (ATG1, ATG2, ATG9, ATG13, ATG18, and ATG27), 2) the phosphatidylinositol 3-kinase complex (ATG6/VPS30, ATG14, VPS15, and ATG34), and 3) the ubiquitin-like protein system (ATG3, ATG4, ATG5, ATG7, ATG8, ATG10, ATG12, and ATG16). Less is known about how the core machinery is adapted or modulated with additional components to accommodate the nonselective sequestration of bulk cytosol (autophagosome formation) or selective sequestration of specific cargos (Cvt vesicle, pexophagosome, or bacteria-containing autophagosome formation). The pexophagosome-specific additions include the ATG30-ATG11-ATG17 receptor-adaptors complex, the coiled-coil protein ATG25, and the sterol glucosyltransferase ATG26. ATG26 is necessary for the degradation of medium peroxisomes. It contains 2 GRAM domains and a single PH domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 130

>gnl|CDD|241404 cd13250, PH_ACAP, ArfGAP with coiled-coil, ankyrin repeat and PH domains Pleckstrin homology (PH) domain

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 14/104 (13%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMY----HEEPLSAYPKGEIFLGHCSDGYTVRL 236
           +EG+L+K        +++RWF++   +L+Y     ++  +     ++ L  C    TV+ 
Sbjct: 1   KEGYLFKRSSNAFKTWKRRWFSIQNGQLVYQKRFKKDTPTVV-VEDLRL--C----TVK- 52

Query: 237 GVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT 280
             P    D+ F F + +P + Y   A S  DR  WIQA+Q    
Sbjct: 53  --PCEDIDRRFCFEVVSPTKSYMLQAESEEDRQAWIQAIQAAIA 94

ACAP (also called centaurin beta) functions both as a Rab35 effector and as an Arf6-GTPase-activating protein (GAP) by which it controls actin remodeling and membrane trafficking. ACAP contain an NH2-terminal bin/amphiphysin/Rvs (BAR) domain, a phospholipid-binding domain, a PH domain, a GAP domain, and four ankyrin repeats. The AZAPs constitute a family of Arf GAPs that are characterized by an NH2-terminal pleckstrin homology (PH) domain and a central Arf GAP domain followed by two or more ankyrin repeats. On the basis of sequence and domain organization, the AZAP family is further subdivided into four subfamilies: 1) the ACAPs contain an NH2-terminal bin/amphiphysin/Rvs (BAR) domain (a phospholipid-binding domain that is thought to sense membrane curvature), a single PH domain followed by the GAP domain, and four ankyrin repeats; 2) the ASAPs also contain an NH2-terminal BAR domain, the tandem PH domain/GAP domain, three ankyrin repeats, two proline-rich regions, and a COOH-terminal Src homology 3 domain; 3) the AGAPs contain an NH2-terminal GTPase-like domain (GLD), a split PH domain, and the GAP domain followed by four ankyrin repeats; and 4) the ARAPs contain both an Arf GAP domain and a Rho GAP domain, as well as an NH2-terminal sterile-a motif (SAM), a proline-rich region, a GTPase-binding domain, and five PH domains. PMID 18003747 and 19055940 Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 98

>gnl|CDD|241420 cd13266, PH_Skap_family, Src kinase-associated phosphoprotein family Pleckstrin homology (PH) domain

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 8/84 (9%)

Query: 196 YRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKD--QGFTFTLKT 253
           ++KRW  L      Y+        KGE  +    DGY  R+  P   KD  +   F +  
Sbjct: 21  WQKRWCVLSNTAFYYYGSEKDKQQKGEFAI----DGYRARM-NPTLRKDSKKDCCFEISA 75

Query: 254 P-QRWYQFSALSAPDRDQWIQAVQ 276
           P +R YQF+A S  +  +W+  ++
Sbjct: 76  PDKRVYQFTAASPKEAREWVDQIK 99

Skap adaptor proteins couple receptors to cytoskeletal rearrangements. Src kinase-associated phosphoprotein of 55 kDa (Skap55)/Src kinase-associated phosphoprotein 1 (Skap1), Skap2, and Skap-homology (Skap-hom) have an N-terminal coiled-coil conformation, a central PH domain and a C-terminal SH3 domain. Their PH domains bind 3'-phosphoinositides as well as directly affecting targets such as in Skap55 where it directly affecting integrin regulation by ADAP and NF-kappaB activation or in Skap-hom where the dimerization and PH domains comprise a 3'-phosphoinositide-gated molecular switch that controls ruffle formation. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 106

>gnl|CDD|241462 cd13308, PH_3BP2, SH3 domain-binding protein 2 Pleckstrin homology (PH) domain

 Score = 38.9 bits (91), Expect = 4e-04
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 10/105 (9%)

Query: 174 LLTRDFGREGWLWKTG--PKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDG 231
            L RD    G+L K G   K    +  R+  +    + Y +   SA PKG   L    +G
Sbjct: 4   TLPRDVTHSGYLTKKGGSQKQLLKWPLRYVIIHKGCVYYFKNSQSAKPKGVFSL----NG 59

Query: 232 YTVRLGVPPGAKDQGFTFTLKTPQ---RWYQFSALSAPDRDQWIQ 273
           Y  R      +K + F F +       R + FSA S  +  +W++
Sbjct: 60  YNRRAAEETTSKKK-FVFKIIHLSKDHRTWYFSAKSEDEMKEWME 103

SH3BP2 (the gene that encodes the adaptor protein 3BP2), HD, ITU, IT10C3, and ADD1 are located near the Huntington's Disease Gene on Human Chromosome 4pl6.3. SH3BP2 lies in a region that is often missing in individuals with Wolf-Hirschhorn syndrome (WHS). Gain of function mutations in SH3BP2 causes enhanced B-cell antigen receptor (BCR)-mediated activation of nuclear factor of activated T cells (NFAT), resulting in a rare, genetic disorder called cherubism. This results in an increase in the signaling complex formation with Syk, phospholipase C-gamma2 (PLC-gamma2), and Vav1. It was recently discovered that Tankyrase regulates 3BP2 stability through ADP-ribosylation and ubiquitylation by the E3-ubiquitin ligase. Cherubism mutations uncouple 3BP2 from Tankyrase-mediated protein destruction, which results in its stabilization and subsequent hyperactivation of the Src, Syk, and Vav signaling pathways. SH3BP2 is also a potential negative regulator of the abl oncogene. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 113

>gnl|CDD|241309 cd10573, PH_DAPP1, Dual Adaptor for Phosphotyrosine and 3-Phosphoinositides Pleckstrin homology (PH) domain

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 9/93 (9%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV-P 239
           +EG+L K G      ++ RWF L   +L Y +      P   + L  CS        V  
Sbjct: 5   KEGYLTKQG-GIVKNWKTRWFVLRKNELKYFKTRTDTKPIRTLDLTECS-------SVQA 56

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWI 272
             ++ +   F L  P R +   A +  + D+W+
Sbjct: 57  DYSQGKPNCFRLVFPDRTFYMYAKTEEEADEWV 89

DAPP1 (also known as PHISH/3' phosphoinositide-interacting SH2 domain-containing protein or Bam32) plays a role in B-cell activation and has potential roles in T-cell and mast cell function. DAPP1 promotes B cell receptor (BCR) induced activation of Rho GTPases Rac1 and Cdc42, which feed into mitogen-activated protein kinases (MAPK) activation pathways and affect cytoskeletal rearrangement. DAPP1can also regulate BCR-induced activation of extracellular signal-regulated kinase (ERK), and c-jun NH2-terminal kinase (JNK). DAPP1 contains an N-terminal SH2 domain and a C-terminal pleckstrin homology (PH) domain with a single tyrosine phosphorylation site located centrally. DAPP1 binds strongly to both PtdIns(3,4,5)P3 and PtdIns(3,4)P2. The PH domain is essential for plasma membrane recruitment of PI3K upon cell activation. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 96

>gnl|CDD|241281 cd01250, PH_AGAP, Arf-GAP with GTPase, ANK repeat and PH domain-containing protein Pleckstrin homology (PH) domain

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 181 REGWLWKTGPK--NADAYRKRWFTLDYRKLMYHEEPLSAY----PKGEIFLGHCSDGYTV 234
           ++G+L+K   K  N +  +K     D  +L YH   L  Y       EI L       TV
Sbjct: 6   KQGYLYKRSSKSLNKEWKKKYVTLCDDGRLTYHPS-LHDYMENVHGKEIDLLRT----TV 60

Query: 235 RL--GVPPGAKDQG-FTFTL--KTPQRWYQFSALSAPDRDQWIQAVQ 276
           ++    PP A  +  F F +     ++W  F A S+ +RD+W+QA++
Sbjct: 61  KVPGKRPPRASSKSAFEFIIVSLDGKQW-HFEAASSEERDEWVQAIE 106

AGAP (also called centaurin gamma; PIKE/Phosphatidylinositol-3-kinase enhancer) reside mainly in the nucleus and are known to activate phosphoinositide 3-kinase, a key regulator of cell proliferation, motility and vesicular trafficking. There are 3 isoforms of AGAP (PIKE-A, PIKE-L, and PIKE-S) the longest of which PIKE-L consists of N-terminal proline rich domains (PRDs), followed by a GTPase domain, a split PH domain (PHN and PHC), an ArfGAP domain and two ankyrin repeats. PIKE-S terminates after the PHN domain and PIKE-A is missing the PRD region. Centaurin binds phosphatidlyinositol (3,4,5)P3. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 114

>gnl|CDD|241410 cd13256, PH3_ARAP, ArfGAP with RhoGAP domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain, repeat 3

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 18/110 (16%)

Query: 183 GWLWKTGP--------KNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTV 234
           G+L+KT          K  + + +RW  L+   L Y+E   S  P GEI +        V
Sbjct: 6   GFLYKTASMAKPTTERKGKEEFSRRWCVLEDGFLSYYESDKSTTPNGEIDISE-----IV 60

Query: 235 RLGVPPGAKDQG----FTFTLKTP-QRWYQFSALSAPDRDQWIQAVQTGF 279
            L V P   D G    FTF L    +R Y F   +A    +W +A+   F
Sbjct: 61  CLAVNPPDTDPGHGFEFTFELYLESERLYLFGTETAEAAHEWTKAIAKAF 110

ARAP proteins (also called centaurin delta) are phosphatidylinositol 3,4,5-trisphosphate-dependent GTPase-activating proteins that modulate actin cytoskeleton remodeling by regulating ARF and RHO family members. They bind phosphatidylinositol 3,4,5-trisphosphate (PtdIns(3,4,5)P3) and phosphatidylinositol 3,4-bisphosphate (PtdIns(3,4,5)P2) binding. There are 3 mammalian ARAP proteins: ARAP1, ARAP2, and ARAP3. All ARAP proteins contain a N-terminal SAM (sterile alpha motif) domain, 5 PH domains, an ArfGAP domain, 2 ankyrin domain, A RhoGap domain, and a Ras-associating domain. This hierarchy contains the third PH domain in ARAP. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 110

>gnl|CDD|241451 cd13297, PH3_MyoX-like, Myosin X-like Pleckstrin homology (PH) domain, repeat 3

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 14/101 (13%)

Query: 183 GWLWKTGPKNADAY-RKRWFTLDYRKLMYHEEPLSAYPK-GEIFLGH-CSDGYTVRLGVP 239
           GWL K G K  +   +KRWF L    L Y++       K G + L   CS    V   VP
Sbjct: 17  GWLLKEGGKGGNLTKKKRWFVLTPNSLDYYKSSERNALKLGSLVLNSLCS----V---VP 69

Query: 240 P---GAKDQGF-TFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
           P     K+ G+ TFT+   +  Y        + ++W+ A+Q
Sbjct: 70  PDEKVYKETGYWTFTVHGRKHSYYLYTKLQEEANRWVNAIQ 110

MyoX, a MyTH-FERM myosin, is a molecular motor that has crucial functions in the transport and/or tethering of integrins in the actin-based extensions known as filopodia, microtubule binding, and in netrin-mediated axon guidance. It functions as a dimer. MyoX walks on bundles of actin, rather than single filaments, unlike the other unconventional myosins. MyoX is present in organisms ranging from humans to choanoflagellates, but not in Drosophila and Caenorhabditis elegans.MyoX consists of a N-terminal motor/head region, a neck made of 3 IQ motifs, and a tail consisting of a coiled-coil domain, a PEST region, 3 PH domains, a myosin tail homology 4 (MyTH4), and a FERM domain at its very C-terminus. The first PH domain in the MyoX tail is a split-PH domain, interupted by the second PH domain such that PH 1a and PH 1b flanks PH 2. The third PH domain (PH 3) follows the PH 1b domain. This cd contains the third MyoX PH repeat. PLEKHH3/Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) member 3 is also part of this CD and like MyoX contains a FERM domain, a MyTH4 domain, and a single PH domain. Not much is known about the function of PLEKHH3. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 123

>gnl|CDD|241442 cd13288, PH_Ses, Sesquipedalian family Pleckstrin homology (PH) domain

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 14/108 (12%)

Query: 59  MDGFLMKRGKESGKYHPRRFVL--NEINDTIKYYV--KEKKEPKATLRISELNVVIAPSK 114
            +G+L K+G+ +  Y  R FVL  N     + +Y   K  +EP   + + E    +  S+
Sbjct: 10  KEGYLWKKGERNTSYQKRWFVLKGN-----LLFYFEKKGDREP-LGVIVLE-GCTVELSE 62

Query: 115 IEHPHSLQLTFMKDGSTRHIYVYHEESQSIM-NWYHAIRNAKFHRLQV 161
            E P++  + F  DG     YV   ESQ  M +W  A+  A +  L++
Sbjct: 63  DEEPYAFAIRF--DGPGSRSYVLAAESQEDMESWMKALSRASYDYLRL 108

The sesquipedalian family has 2 mammalian members: Ses1 and Ses2, which are also callled 7 kDa inositol polyphosphate phosphatase-interacting protein 1 and 2. They play a role in endocytic trafficking and are required for receptor recycling from endosomes, both to the trans-Golgi network and the plasma membrane. Members of this family form homodimers and heterodimers. Sesquipedalian interacts with inositol polyphosphate 5-phosphatase OCRL-1 (INPP5F) also known as Lowe oculocerebrorenal syndrome protein, a phosphatase enzyme that is involved in actin polymerization and is found in the trans-Golgi network and INPP5B. Sesquipedalian contains a single PH domain. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 120

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	321
cd01251	103	PH_centaurin_alpha Centaurin alpha Pleckstrin homo	99.93
cd01233	100	Unc104 Unc-104 pleckstrin homology (PH) domain. Un	99.88
cd01264	101	PH_melted Melted pleckstrin homology (PH) domain.	99.87
cd01260	96	PH_CNK Connector enhancer of KSR (Kinase suppresso	99.87
cd01265	95	PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain	99.87
cd01238	106	PH_Tec Tec pleckstrin homology (PH) domain. Tec pl	99.87
cd01235	101	PH_SETbf Set binding factor Pleckstrin Homology (P	99.86
cd01236	104	PH_outspread Outspread Pleckstrin homology (PH) do	99.85
cd01247	91	PH_GPBP Goodpasture antigen binding protein (GPBP)	99.85
cd01257	101	PH_IRS Insulin receptor substrate (IRS) pleckstrin	99.84
cd01233	100	Unc104 Unc-104 pleckstrin homology (PH) domain. Un	99.83
cd01252	125	PH_cytohesin Cytohesin Pleckstrin homology (PH) do	99.83
KOG0930|consensus	395		99.82
cd01266	108	PH_Gab Gab (Grb2-associated binder) pleckstrin hom	99.81
cd01251	103	PH_centaurin_alpha Centaurin alpha Pleckstrin homo	99.81
cd01235	101	PH_SETbf Set binding factor Pleckstrin Homology (P	99.81
cd01260	96	PH_CNK Connector enhancer of KSR (Kinase suppresso	99.8
cd01265	95	PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain	99.8
cd01246	91	PH_oxysterol_bp Oxysterol binding protein (OSBP) P	99.79
cd01244	98	PH_RasGAP_CG9209 RAS_GTPase activating protein (GA	99.79
cd01250	94	PH_centaurin Centaurin Pleckstrin homology (PH) do	99.79
cd01245	98	PH_RasGAP_CG5898 RAS GTPase-activating protein (GA	99.79
cd01264	101	PH_melted Melted pleckstrin homology (PH) domain.	99.79
cd01247	91	PH_GPBP Goodpasture antigen binding protein (GPBP)	99.78
cd01241	102	PH_Akt Akt pleckstrin homology (PH) domain. Akt pl	99.77
cd01252	125	PH_cytohesin Cytohesin Pleckstrin homology (PH) do	99.77
cd01238	106	PH_Tec Tec pleckstrin homology (PH) domain. Tec pl	99.77
cd01236	104	PH_outspread Outspread Pleckstrin homology (PH) do	99.76
cd01266	108	PH_Gab Gab (Grb2-associated binder) pleckstrin hom	99.75
PF00169	104	PH: PH domain; InterPro: IPR001849 The pleckstrin	99.73
cd01257	101	PH_IRS Insulin receptor substrate (IRS) pleckstrin	99.71
cd01245	98	PH_RasGAP_CG5898 RAS GTPase-activating protein (GA	99.7
cd01246	91	PH_oxysterol_bp Oxysterol binding protein (OSBP) P	99.7
cd01250	94	PH_centaurin Centaurin Pleckstrin homology (PH) do	99.69
cd01254	121	PH_PLD Phospholipase D (PLD) pleckstrin homology (	99.68
KOG0703|consensus	287		99.68
PF15413	112	PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FE	99.66
cd01219	101	PH_FGD FGD (faciogenital dysplasia protein) plecks	99.65
cd01241	102	PH_Akt Akt pleckstrin homology (PH) domain. Akt pl	99.64
cd01263	122	PH_anillin Anillin Pleckstrin homology (PH) domain	99.64
KOG0930|consensus	395		99.63
cd01244	98	PH_RasGAP_CG9209 RAS_GTPase activating protein (GA	99.63
PF15409	89	PH_8: Pleckstrin homology domain	99.63
cd01220	99	PH_CDEP Chondrocyte-derived ezrin-like domain cont	99.59
PF00169	104	PH: PH domain; InterPro: IPR001849 The pleckstrin	99.59
cd01237	106	Unc112 Unc-112 pleckstrin homology (PH) domain. Un	99.56
cd01256	110	PH_dynamin Dynamin pleckstrin homology (PH) domain	99.55
cd01253	104	PH_beta_spectrin Beta-spectrin pleckstrin homology	99.52
KOG1117|consensus	1186		99.52
smart00233	102	PH Pleckstrin homology domain. Domain commonly fou	99.52
KOG1117|consensus	1186		99.5
PF15409	89	PH_8: Pleckstrin homology domain	99.48
cd01219	101	PH_FGD FGD (faciogenital dysplasia protein) plecks	99.47
cd01263	122	PH_anillin Anillin Pleckstrin homology (PH) domain	99.44
cd01230	117	PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6	99.44
cd01254	121	PH_PLD Phospholipase D (PLD) pleckstrin homology (	99.4
PF15413	112	PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FE	99.4
cd00821	96	PH Pleckstrin homology (PH) domain. Pleckstrin hom	99.37
cd01253	104	PH_beta_spectrin Beta-spectrin pleckstrin homology	99.35
cd01237	106	Unc112 Unc-112 pleckstrin homology (PH) domain. Un	99.33
cd00900	99	PH-like Pleckstrin homology-like domain. Pleckstri	99.31
cd01256	110	PH_dynamin Dynamin pleckstrin homology (PH) domain	99.3
smart00233	102	PH Pleckstrin homology domain. Domain commonly fou	99.28
cd01220	99	PH_CDEP Chondrocyte-derived ezrin-like domain cont	99.26
cd00821	96	PH Pleckstrin homology (PH) domain. Pleckstrin hom	99.23
KOG1090|consensus	1732		99.2
cd01218	104	PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain	99.18
cd00900	99	PH-like Pleckstrin homology-like domain. Pleckstri	99.18
cd01239	117	PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin hom	99.18
cd01234	117	PH_CADPS CADPS (Ca2+-dependent activator protein)	99.14
PF15410	119	PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN	99.14
cd01230	117	PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6	99.14
KOG1090|consensus	1732		99.05
KOG0690|consensus	516		99.0
smart00105	112	ArfGap Putative GTP-ase activating proteins for th	98.99
PF14593	104	PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.	98.97
KOG0248|consensus	936		98.95
KOG0705|consensus	749		98.94
cd01242	112	PH_ROK Rok (Rho- associated kinase) pleckstrin hom	98.94
cd01243	122	PH_MRCK MRCK (myotonic dystrophy-related Cdc42-bin	98.87
cd01261	112	PH_SOS Son of Sevenless (SOS) Pleckstrin homology	98.87
cd01234	117	PH_CADPS CADPS (Ca2+-dependent activator protein)	98.82
cd01249	104	PH_oligophrenin Oligophrenin Pleckstrin homology (	98.82
cd01259	114	PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor pr	98.81
cd01259	114	PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor pr	98.78
KOG3531|consensus	1036		98.75
PF01412	116	ArfGap: Putative GTPase activating protein for Arf	98.74
KOG2059|consensus	800		98.71
cd01218	104	PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain	98.68
KOG4424|consensus	623		98.62
PF15410	119	PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN	98.6
cd01262	89	PH_PDK1 3-Phosphoinositide dependent protein kinas	98.58
cd01239	117	PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin hom	98.55
KOG0690|consensus	516		98.5
KOG0521|consensus	785		98.47
PF14593	104	PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.	98.44
cd01242	112	PH_ROK Rok (Rho- associated kinase) pleckstrin hom	98.4
PLN03119	648	putative ADP-ribosylation factor GTPase-activating	98.36
KOG3640|consensus	1116		98.35
cd01261	112	PH_SOS Son of Sevenless (SOS) Pleckstrin homology	98.33
cd01258	108	PH_syntrophin Syntrophin pleckstrin homology (PH)	98.31
PLN02866	1068	phospholipase D	98.3
KOG2059|consensus	800		98.29
PLN03131	705	hypothetical protein; Provisional	98.28
cd01240	116	PH_beta-ARK Beta adrenergic receptor kinase 1(beta	98.25
PTZ00267	478	NIMA-related protein kinase; Provisional	98.22
cd01243	122	PH_MRCK MRCK (myotonic dystrophy-related Cdc42-bin	98.15
cd01224	109	PH_Collybistin Collybistin pleckstrin homology (PH	98.07
KOG3751|consensus	622		98.04
PF12814	123	Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin	98.03
cd01222	97	PH_clg Clg (common-site lymphoma/leukemia guanine	98.02
KOG3640|consensus	1116		98.02
PLN00188	719	enhanced disease resistance protein (EDR2); Provis	97.98
cd01226	100	PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin	97.92
KOG0932|consensus	774		97.86
KOG1739|consensus	611		97.82
PF12814	123	Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin	97.8
PTZ00283	496	serine/threonine protein kinase; Provisional	97.79
KOG3751|consensus	622		97.77
KOG0521|consensus	785		97.72
cd01231	107	PH_Lnk LNK-family Pleckstrin homology (PH) domain.	97.62
KOG0248|consensus	936		97.62
cd01262	89	PH_PDK1 3-Phosphoinositide dependent protein kinas	97.6
cd01249	104	PH_oligophrenin Oligophrenin Pleckstrin homology (	97.6
KOG4424|consensus	623		97.57
PLN02866	1068	phospholipase D	97.55
cd01221	125	PH_ephexin Ephexin Pleckstrin homology (PH) domain	97.53
cd01240	116	PH_beta-ARK Beta adrenergic receptor kinase 1(beta	97.51
PLN00188	719	enhanced disease resistance protein (EDR2); Provis	97.5
PTZ00267	478	NIMA-related protein kinase; Provisional	97.49
KOG3549|consensus	505		97.49
PF15406	112	PH_6: Pleckstrin homology domain	97.47
cd01228	96	PH_BCR-related BCR (breakpoint cluster region)-rel	97.41
cd01222	97	PH_clg Clg (common-site lymphoma/leukemia guanine	97.28
cd01221	125	PH_ephexin Ephexin Pleckstrin homology (PH) domain	97.28
KOG3723|consensus	851		97.09
cd01224	109	PH_Collybistin Collybistin pleckstrin homology (PH	97.09
KOG3543|consensus	1218		97.03
KOG3531|consensus	1036		96.98
cd01225	111	PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-	96.96
PF15404	185	PH_4: Pleckstrin homology domain	96.82
PF15404	185	PH_4: Pleckstrin homology domain	96.75
KOG3551|consensus	506		96.7
PF15408	104	PH_7: Pleckstrin homology domain	96.66
cd01223	116	PH_Vav Vav pleckstrin homology (PH) domain. Vav pl	96.57
KOG3723|consensus	851		96.57
KOG4236|consensus	888		96.5
KOG0818|consensus	669		96.45
KOG1739|consensus	611		96.44
KOG1451|consensus	812		96.35
cd01258	108	PH_syntrophin Syntrophin pleckstrin homology (PH)	96.22
PTZ00283	496	serine/threonine protein kinase; Provisional	96.2
cd01225	111	PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-	96.19
cd01228	96	PH_BCR-related BCR (breakpoint cluster region)-rel	96.14
cd01226	100	PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin	96.06
cd01232	114	PH_TRIO Trio pleckstrin homology (PH) domain. Trio	95.81
cd01248	115	PH_PLC Phospholipase C (PLC) pleckstrin homology (	95.81
cd01248	115	PH_PLC Phospholipase C (PLC) pleckstrin homology (	95.78
KOG3543|consensus	1218		95.67
cd01227	133	PH_Dbs Dbs (DBL's big sister) pleckstrin homology	95.33
COG5347	319	GTPase-activating protein that regulates ARFs (ADP	95.07
KOG1737|consensus	799		95.06
KOG1737|consensus	799		94.98
PF15406	112	PH_6: Pleckstrin homology domain	94.95
cd01232	114	PH_TRIO Trio pleckstrin homology (PH) domain. Trio	94.19
KOG0932|consensus	774		94.16
KOG4807|consensus	593		93.74
cd01231	107	PH_Lnk LNK-family Pleckstrin homology (PH) domain.	93.68
PF15408	104	PH_7: Pleckstrin homology domain	92.98
PF15405	135	PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.	91.87
cd01255	160	PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM	91.64
KOG1738|consensus	638		91.17
PF15411	116	PH_10: Pleckstrin homology domain	90.57
KOG1451|consensus	812		89.97
cd01223	116	PH_Vav Vav pleckstrin homology (PH) domain. Vav pl	88.79
KOG0705|consensus	749		88.61
KOG1738|consensus	638		88.61
cd01227	133	PH_Dbs Dbs (DBL's big sister) pleckstrin homology	87.0
KOG0592|consensus	604		86.54
PF15411	116	PH_10: Pleckstrin homology domain	85.64
KOG2070|consensus	661		85.42
PF15405	135	PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.	84.35
KOG1170|consensus	1099		84.16
KOG0517|consensus	2473		83.93
PF08458	110	PH_2: Plant pleckstrin homology-like region; Inter	83.4
KOG3523|consensus	695		82.08
KOG4807|consensus	593		80.35

>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain

Probab=99.93  E-value=1e-25  Score=175.57  Aligned_cols=98  Identities=49%  Similarity=0.964  Sum_probs=75.2

Q ss_pred             eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCC-CCCCCceEEEEeCCeEEE
Q psy9639         181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPG-AKDQGFTFTLKTPQRWYQ  259 (321)
Q Consensus       181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~-~~~~~~~F~i~t~~r~~~  259 (321)
                      |+|||.|+|+...+.||+|||+|+++.|+||+++.+..|+|.|+|+.+..+++|....+.+ .....++|.|.|++|+|+
T Consensus         1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~Rty~   80 (103)
T cd01251           1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPLDAFAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPERKFL   80 (103)
T ss_pred             CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCCCcCcCcEEEeeccccceeEeccCCccccccccceEEEEeCCeEEE
Confidence            5899999998744899999999999999999999999999999999887778887654433 222345999999999999


Q ss_pred             EEcCCHHHHHHHHHHHhhc
Q psy9639         260 FSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       260 f~A~s~~e~~~Wv~aL~~a  278 (321)
                      |+|+|++||++||+||+++
T Consensus        81 l~a~s~~e~~~Wi~ai~~v   99 (103)
T cd01251          81 FACETEQDRREWIAAFQNV   99 (103)
T ss_pred             EECCCHHHHHHHHHHHHHH
Confidence            4444444444444444443

Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici

>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain

Probab=99.88  E-value=2.5e-22  Score=155.77  Aligned_cols=95  Identities=21%  Similarity=0.264  Sum_probs=78.0

Q ss_pred             cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCC-CCCCCCceEEEEeCCeE
Q psy9639         179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP-GAKDQGFTFTLKTPQRW  257 (321)
Q Consensus       179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~-~~~~~~~~F~i~t~~r~  257 (321)
                      ++|+|||.|+|+.. +.|++|||+|+++.|+||+++.+..|.|.|+|..    +.|...... ...+++++|.|.+++|+
T Consensus         2 v~k~G~L~Kkg~~~-k~WkkRwfvL~~~~L~yyk~~~~~~~~~~I~L~~----~~v~~~~~~~~~~~~~~~F~I~t~~rt   76 (100)
T cd01233           2 VSKKGYLNFPEETN-SGWTRRFVVVRRPYLHIYRSDKDPVERGVINLST----ARVEHSEDQAAMVKGPNTFAVCTKHRG   76 (100)
T ss_pred             cceeEEEEeeCCCC-CCcEEEEEEEECCEEEEEccCCCccEeeEEEecc----cEEEEccchhhhcCCCcEEEEECCCCE
Confidence            57899999999987 8999999999999999999999999999999964    344432211 11235789999999999


Q ss_pred             EEEEcCCHHHHHHHHHHHhhc
Q psy9639         258 YQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       258 ~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      |+|+|+|++|+++||+||+..
T Consensus        77 ~~~~A~s~~e~~~Wi~ai~~~   97 (100)
T cd01233          77 YLFQALSDKEMIDWLYALNPL   97 (100)
T ss_pred             EEEEcCCHHHHHHHHHHhhhh
Confidence            998888888888888888664

Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.

>cd01264 PH_melted Melted pleckstrin homology (PH) domain

Probab=99.87  E-value=1.1e-21  Score=150.73  Aligned_cols=96  Identities=19%  Similarity=0.316  Sum_probs=75.2

Q ss_pred             eEEEEEEeCCC--CCCCcceEEEEEeCCeeEeeeCCCCCCcc-eeEEcccccCceEEecCCC-CCCCCCCceEEEEeCCe
Q psy9639         181 REGWLWKTGPK--NADAYRKRWFTLDYRKLMYHEEPLSAYPK-GEIFLGHCSDGYTVRLGVP-PGAKDQGFTFTLKTPQR  256 (321)
Q Consensus       181 k~G~L~K~g~~--~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~-g~i~L~~~~~~~~V~~~~~-~~~~~~~~~F~i~t~~r  256 (321)
                      .+|||.|+|+.  ..+.|++|||+|+++.|+||++.....|. |+|+|+.+.   +|..+.. ......+++|+|.||+|
T Consensus         2 ~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~~~~~~~g~IdL~~~~---sVk~~~~~~~~~~~~~~Fei~tp~r   78 (101)
T cd01264           2 IEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDPDDCSIDLSKIR---SVKAVAKKRRDRSLPKAFEIFTADK   78 (101)
T ss_pred             cceEEeecCccceeeecceeEEEEEeCCEEEEEeccCccCCCCceEEcccce---EEeeccccccccccCcEEEEEcCCc
Confidence            48999999993  34899999999999999999998665565 999998763   4554321 11123469999999999


Q ss_pred             EEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         257 WYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       257 ~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +|+|+|+|++++++||++|+.|+
T Consensus        79 t~~l~A~se~e~e~WI~~i~~a~  101 (101)
T cd01264          79 TYILKAKDEKNAEEWLQCLNIAV  101 (101)
T ss_pred             eEEEEeCCHHHHHHHHHHHHhhC
Confidence            99988888888888888887663

Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain

Probab=99.87  E-value=1.2e-21  Score=150.88  Aligned_cols=92  Identities=25%  Similarity=0.566  Sum_probs=77.3

Q ss_pred             ceEEEEEEeCCCC---CCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-
Q psy9639         180 GREGWLWKTGPKN---ADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-  255 (321)
Q Consensus       180 ~k~G~L~K~g~~~---~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-  255 (321)
                      +++|||.|++...   .+.|++|||+|+++.|+||+++.+..|.|.|+|..    +.|.... .  ..++++|.|.+++ 
T Consensus         1 ~~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~~~~~~~~I~L~~----~~v~~~~-~--~~k~~~F~I~~~~~   73 (96)
T cd01260           1 DCDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQDEKAEGLIFLSG----FTIESAK-E--VKKKYAFKVCHPVY   73 (96)
T ss_pred             CceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCCCCccceEEEccC----CEEEEch-h--cCCceEEEECCCCC
Confidence            3689999997653   24899999999999999999999999999999954    5555432 1  2367999999998 


Q ss_pred             eEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         256 RWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       256 r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      |+|+|+|+|++++++||.||++|
T Consensus        74 ~~~~f~a~s~~e~~~Wi~ai~~~   96 (96)
T cd01260          74 KSFYFAAETLDDLSQWVNHLITA   96 (96)
T ss_pred             cEEEEEeCCHHHHHHHHHHHHhC
Confidence            99999999999999999999875

Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet

>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain

Probab=99.87  E-value=1.2e-21  Score=150.41  Aligned_cols=89  Identities=27%  Similarity=0.426  Sum_probs=72.9

Q ss_pred             EEEEEEeCCCC-CCCcceEEEEEeC--CeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEE
Q psy9639         182 EGWLWKTGPKN-ADAYRKRWFTLDY--RKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWY  258 (321)
Q Consensus       182 ~G~L~K~g~~~-~~~WkkRwfvL~~--~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~  258 (321)
                      +|||.|+|+++ .++|++|||||++  ..|+||+++.+..|+|.|+|..+    .+.. .+.   ..+++|.|.|++|+|
T Consensus         2 ~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~d~~p~G~I~L~~~----~~~~-~~~---~~~~~F~i~t~~r~y   73 (95)
T cd01265           2 CGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQDAKPLGRVDLSGA----AFTY-DPR---EEKGRFEIHSNNEVI   73 (95)
T ss_pred             cccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCCcccccceEECCcc----EEEc-CCC---CCCCEEEEEcCCcEE
Confidence            79999998752 4899999999984  57999999999999999999653    2322 111   236799999999999


Q ss_pred             EEEcCCHHHHHHHHHHHhhc
Q psy9639         259 QFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       259 ~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      +|+|+|++||++||+||+.+
T Consensus        74 ~l~A~s~~e~~~Wi~al~~~   93 (95)
T cd01265          74 ALKASSDKQMNYWLQALQSK   93 (95)
T ss_pred             EEECCCHHHHHHHHHHHHhh
Confidence            99999988888888888875

PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01238 PH_Tec Tec pleckstrin homology (PH) domain

Probab=99.87  E-value=1.8e-21  Score=152.44  Aligned_cols=95  Identities=24%  Similarity=0.284  Sum_probs=72.6

Q ss_pred             ceEEEEEEeCCCC----CCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCC----CCCCceE
Q psy9639         180 GREGWLWKTGPKN----ADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGA----KDQGFTF  249 (321)
Q Consensus       180 ~k~G~L~K~g~~~----~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~----~~~~~~F  249 (321)
                      +++|+|+|++...    .++||+|||+|+++.|+||+++.+  ..++|.|+|..+..   |..+.+...    ....++|
T Consensus         1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~~~~~~kG~I~L~~~~~---ve~~~~~~~~~~~~~~~~~F   77 (106)
T cd01238           1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFEKRGSKKGSIDLSKIKC---VETVKPEKNPPIPERFKYPF   77 (106)
T ss_pred             CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCcccccCcceeEECCcceE---EEEecCCcCcccccccCccE
Confidence            5799999997443    249999999999999999999876  37999999987533   332221111    1246899


Q ss_pred             EEEeCCeEEEEEcCCHHHHHHHHHHHhh
Q psy9639         250 TLKTPQRWYQFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       250 ~i~t~~r~~~f~A~s~~e~~~Wv~aL~~  277 (321)
                      +|++++|+|++.|+|++|+++||+||++
T Consensus        78 ~i~t~~r~~yl~A~s~~er~~WI~ai~~  105 (106)
T cd01238          78 QVVHDEGTLYVFAPTEELRKRWIKALKQ  105 (106)
T ss_pred             EEEeCCCeEEEEcCCHHHHHHHHHHHHh
Confidence            9999999999777777777777777765

Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis

>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain

Probab=99.86  E-value=5.2e-21  Score=148.55  Aligned_cols=95  Identities=31%  Similarity=0.505  Sum_probs=75.5

Q ss_pred             eEEEEEEeCCCCCCCcceEEEEEe--CCeeEeeeCCCCCCcceeEEcccccCceEEecCCCC----CCCCCCceEEEEeC
Q psy9639         181 REGWLWKTGPKNADAYRKRWFTLD--YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP----GAKDQGFTFTLKTP  254 (321)
Q Consensus       181 k~G~L~K~g~~~~~~WkkRwfvL~--~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~----~~~~~~~~F~i~t~  254 (321)
                      ++|||.|+|... +.|++|||+|+  ++.|.||+++.+..|+|.|+|..+.   .|....+.    ......++|.|.++
T Consensus         1 ~~G~L~K~g~~~-k~WkkRwFvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~---~v~~~~~~~~~~~~~~~~~~f~i~t~   76 (101)
T cd01235           1 CEGYLYKRGALL-KGWKPRWFVLDPDKHQLRYYDDFEDTAEKGCIDLAEVK---SVNLAQPGMGAPKHTSRKGFFDLKTS   76 (101)
T ss_pred             CeEEEEEcCCCC-CCccceEEEEECCCCEEEEecCCCCCccceEEEcceeE---EEeecCCCCCCCCCCCCceEEEEEeC
Confidence            489999999887 89999999999  4599999999999999999998652   33321111    11124578999999


Q ss_pred             CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         255 QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       255 ~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +|+|+|.|+|++|+++||.||+++|
T Consensus        77 ~r~~~~~a~s~~e~~~Wi~ai~~~i  101 (101)
T cd01235          77 KRTYNFLAENINEAQRWKEKIQQCI  101 (101)
T ss_pred             CceEEEECCCHHHHHHHHHHHHhhC
Confidence            9999988888888888888888765

Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .

>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain

Probab=99.85  E-value=7.7e-21  Score=147.27  Aligned_cols=91  Identities=22%  Similarity=0.417  Sum_probs=70.9

Q ss_pred             eEEEEEEeCCC--------CCCCcceEEEEEe-CCeeEeeeCC-CCCCcceeEEcccccCceEEecCCCCCCCCCCceEE
Q psy9639         181 REGWLWKTGPK--------NADAYRKRWFTLD-YRKLMYHEEP-LSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFT  250 (321)
Q Consensus       181 k~G~L~K~g~~--------~~~~WkkRwfvL~-~~~L~Yyk~~-~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~  250 (321)
                      ++|||.|.++.        ..+.||||||||+ ++.|+||++. .+..|+|+|+|..+   ++|..+.  +..+++++|.
T Consensus         1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~~~~~p~G~IdL~~~---~~V~~~~--~~~~~~~~f~   75 (104)
T cd01236           1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEMPTTLPQGTIDMNQC---TDVVDAE--ARTGQKFSIC   75 (104)
T ss_pred             CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCCCCcccceEEEccce---EEEeecc--cccCCccEEE
Confidence            47999998764        2479999999998 5677787665 57789999999754   5555432  2234578999


Q ss_pred             EEeCCeEEEEEcCCHHHHHHHHHHHh
Q psy9639         251 LKTPQRWYQFSALSAPDRDQWIQAVQ  276 (321)
Q Consensus       251 i~t~~r~~~f~A~s~~e~~~Wv~aL~  276 (321)
                      |+||+|+|+|.|+|++|+++||.+|+
T Consensus        76 I~tp~R~f~l~Aete~E~~~Wi~~l~  101 (104)
T cd01236          76 ILTPDKEHFIKAETKEEISWWLNMLM  101 (104)
T ss_pred             EECCCceEEEEeCCHHHHHHHHHHHH
Confidence            99999999988888888888888775

Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain

Probab=99.85  E-value=1.6e-20  Score=142.80  Aligned_cols=87  Identities=20%  Similarity=0.266  Sum_probs=71.9

Q ss_pred             eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-eE
Q psy9639         181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-RW  257 (321)
Q Consensus       181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-r~  257 (321)
                      ++|||.|.|... ++|++|||||+++.|+||+++.+  ..|+|.|+|..    +.+...   .  ..++.|.|.+++ |+
T Consensus         1 ~~G~L~K~~~~~-k~Wk~RwFvL~~g~L~Yyk~~~~~~~~~~G~I~L~~----~~i~~~---~--~~~~~F~i~~~~~r~   70 (91)
T cd01247           1 TNGVLSKWTNYI-NGWQDRYFVLKEGNLSYYKSEAEKSHGCRGSIFLKK----AIIAAH---E--FDENRFDISVNENVV   70 (91)
T ss_pred             CceEEEEecccc-CCCceEEEEEECCEEEEEecCccCcCCCcEEEECcc----cEEEcC---C--CCCCEEEEEeCCCeE
Confidence            379999999988 89999999999999999999876  34799999965    334321   1  245789997665 99


Q ss_pred             EEEEcCCHHHHHHHHHHHhh
Q psy9639         258 YQFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       258 ~~f~A~s~~e~~~Wv~aL~~  277 (321)
                      |+|.|+|++|+++||+||+.
T Consensus        71 ~~L~A~s~~e~~~Wi~al~~   90 (91)
T cd01247          71 WYLRAENSQSRLLWMDSVVR   90 (91)
T ss_pred             EEEEeCCHHHHHHHHHHHhh
Confidence            99999999999999999875

Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt

>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain

Probab=99.84  E-value=2.2e-20  Score=144.23  Aligned_cols=89  Identities=26%  Similarity=0.454  Sum_probs=71.4

Q ss_pred             CcceEEEEEEeCCCCCCCcceEEEEEeCC------eeEeeeCCCC-----CCcceeEEcccccCceEEecCCCCCCCCCC
Q psy9639         178 DFGREGWLWKTGPKNADAYRKRWFTLDYR------KLMYHEEPLS-----AYPKGEIFLGHCSDGYTVRLGVPPGAKDQG  246 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~------~L~Yyk~~~~-----~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~  246 (321)
                      +++++|||.|+     +.|+||||||+++      .|.||+++..     ..|+|+|+|..+.   .|... ++  ..++
T Consensus         1 ~v~k~GyL~K~-----K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~---~v~~~-~d--~k~~   69 (101)
T cd01257           1 DVRKSGYLRKQ-----KSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCF---NINKR-AD--AKHR   69 (101)
T ss_pred             CccEEEEEeEe-----cCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceE---EEeec-cc--cccC
Confidence            47899999997     6899999999977      8999999864     6799999998762   34321 11  2346


Q ss_pred             ceEEEEeCCeEEEEEcCCHHHHHHHHHHHhh
Q psy9639         247 FTFTLKTPQRWYQFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       247 ~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~  277 (321)
                      |+|.|.|++|+|+|.|+|++|+++|+++|..
T Consensus        70 ~~f~i~t~dr~f~l~aese~E~~~Wi~~i~~  100 (101)
T cd01257          70 HLIALYTRDEYFAVAAENEAEQDSWYQALLE  100 (101)
T ss_pred             eEEEEEeCCceEEEEeCCHHHHHHHHHHHhh
Confidence            9999999999999888888888888887753

Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.

>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain

Probab=99.83  E-value=8.1e-20  Score=141.67  Aligned_cols=92  Identities=12%  Similarity=0.246  Sum_probs=78.7

Q ss_pred             cceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCC---CCCCceeEEEEeecCceE
Q psy9639          57 GHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSK---IEHPHSLQLTFMKDGSTR  132 (321)
Q Consensus        57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~---~~~~~~~~i~~~~~~~~R  132 (321)
                      ..++|||.|+|+..+.|++|||||.  ++.|.||++ ++..|+|.|+|+++.+...++.   .+.+++|.|    .++.|
T Consensus         2 v~k~G~L~Kkg~~~k~WkkRwfvL~--~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~~~~~~~~~~~~F~I----~t~~r   75 (100)
T cd01233           2 VSKKGYLNFPEETNSGWTRRFVVVR--RPYLHIYRSDKDPVERGVINLSTARVEHSEDQAAMVKGPNTFAV----CTKHR   75 (100)
T ss_pred             cceeEEEEeeCCCCCCcEEEEEEEE--CCEEEEEccCCCccEeeEEEecccEEEEccchhhhcCCCcEEEE----ECCCC
Confidence            4689999999999999999999999  899999999 8899999999998765544332   346777665    45679


Q ss_pred             EEEEEeCChHHHHHHHHHHHhh
Q psy9639         133 HIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       133 ~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      +|+|+|+|++++.+|+.+|+++
T Consensus        76 t~~~~A~s~~e~~~Wi~ai~~~   97 (100)
T cd01233          76 GYLFQALSDKEMIDWLYALNPL   97 (100)
T ss_pred             EEEEEcCCHHHHHHHHHHhhhh
Confidence            9999999999999999999865

Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.

>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain

Probab=99.83  E-value=9.1e-20  Score=147.22  Aligned_cols=114  Identities=27%  Similarity=0.485  Sum_probs=76.9

Q ss_pred             ceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEE
Q psy9639         180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQ  259 (321)
Q Consensus       180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~  259 (321)
                      +++|||.|+|+.. +.|++|||+|.++.|+||+++.+..|.|.|+|..    +.|.... .  ..+++||+|.++++.-.
T Consensus         1 ~k~G~L~K~~~~~-~~WkkRwfvL~~~~L~yyk~~~~~~~~g~I~L~~----~~v~~~~-~--~~~~~~F~i~~~~~~~~   72 (125)
T cd01252           1 DREGWLLKQGGRV-KTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLEN----VSIREVE-D--PSKPFCFELFSPSDKQQ   72 (125)
T ss_pred             CcEEEEEEeCCCC-CCeEeEEEEEECCEEEEEcCCCCCCceEEEECCC----cEEEEcc-c--CCCCeeEEEECCccccc
Confidence            4789999999887 8999999999999999999999999999999964    4555432 1  24678999998754111


Q ss_pred             EEcCCHHHHHHHHHHHhhccccccccCceEEEEecCCHHHHHHHHHHHHHhhc
Q psy9639         260 FSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVLD  312 (321)
Q Consensus       260 f~A~s~~e~~~Wv~aL~~ai~~~l~~~~~~~~l~a~s~~e~~~Wi~al~~~i~  312 (321)
                      +.+..           ...-+..+.++++.|.|+|+|++|+++|++||+.++.
T Consensus        73 i~~~~-----------~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~  114 (125)
T cd01252          73 IKACK-----------TESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASIS  114 (125)
T ss_pred             ccccc-----------ccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence            10000           0000122334455555666666666666666666654

Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG0930|consensus

Probab=99.82  E-value=4.9e-20  Score=161.26  Aligned_cols=149  Identities=26%  Similarity=0.482  Sum_probs=113.8

Q ss_pred             ChHHHHHHHHHHHhhhhhhccccCCCCChhhhhhhhCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCc
Q psy9639         140 ESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYP  219 (321)
Q Consensus       140 s~~e~~~W~~aLr~a~~~~l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~  219 (321)
                      .++.+..-+++|+...+.     +|...++++...+ -+..++|||.|.|+...+.||||||+|++++|+||.-.+|.+|
T Consensus       227 pee~LrnlyeSi~~epFk-----IPeddgndlthtf-fnpdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tTDKEP  300 (395)
T KOG0930|consen  227 PEELLRNLYESIKNEPFK-----IPEDDGNDLTHTF-FNPDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTTDKEP  300 (395)
T ss_pred             cHHHHHHHHHHhcCCCCC-----CCcccCCcchhhc-cCccccceeeeecCCcccchhheeEEeecceeeeeeeccCCCC
Confidence            455667777777755443     5766666643322 2457899999999966699999999999999999999999999


Q ss_pred             ceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhcc-ccccccCceEEEEecCCH
Q psy9639         220 KGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGF-TFTLKTPQRWYQFSALSA  297 (321)
Q Consensus       220 ~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai-~~~l~~~~~~~~l~a~s~  297 (321)
                      +|.|+|.+    .+|++++.   ..+++||+|..|+ +-=.            |+|.++.. +-.+...|.+|.++|.|.
T Consensus       301 rGIIpLeN----lsir~Ved---P~kP~cfEly~ps~~gq~------------IKACKTe~DGRvVEG~H~vYrIsA~~~  361 (395)
T KOG0930|consen  301 RGIIPLEN----LSIREVED---PKKPNCFELYIPSNKGQV------------IKACKTEADGRVVEGNHSVYRISAPTP  361 (395)
T ss_pred             Ccceeccc----cceeeccC---CCCCCeEEEecCCCCcCe------------eeeecccCCceeEeccceEEEeeCCCH
Confidence            99999965    45665432   2478999999763 2222            23333333 577889999999999999


Q ss_pred             HHHHHHHHHHHHhhcC
Q psy9639         298 PDRDQWIQAVQTVLDT  313 (321)
Q Consensus       298 ~e~~~Wi~al~~~i~~  313 (321)
                      +|+++||++|+++|++
T Consensus       362 Ee~~~Wi~sI~a~is~  377 (395)
T KOG0930|consen  362 EEKDEWIKSIKAAISR  377 (395)
T ss_pred             HHHHHHHHHHHHHhcc
Confidence            9999999999999985

>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain

Probab=99.81  E-value=1.6e-19  Score=141.95  Aligned_cols=94  Identities=26%  Similarity=0.385  Sum_probs=72.1

Q ss_pred             eEEEEEEeCCCC---CCCcceEEEEEeCCe-------eEeeeCCCCCCcceeEEcccccCceEEecCCC--CCCCCCCce
Q psy9639         181 REGWLWKTGPKN---ADAYRKRWFTLDYRK-------LMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP--PGAKDQGFT  248 (321)
Q Consensus       181 k~G~L~K~g~~~---~~~WkkRwfvL~~~~-------L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~--~~~~~~~~~  248 (321)
                      .+|||.|+++..   .+.|++|||+|+++.       |.||+++.+..|+|.|+|..+.   .|.....  .......+.
T Consensus         1 ~eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~~~k~~g~I~L~~~~---~v~~~~~~~~~~~~~~~~   77 (108)
T cd01266           1 LEGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSRKFKLEFVIDLESCS---QVDPGLLCTAGNCIFGYG   77 (108)
T ss_pred             CceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCCCCccceEEECCccE---EEcccccccccCcccceE
Confidence            379999998843   259999999999876       5999999999999999997642   2221110  111123578


Q ss_pred             EEEEeCCeEEEEEcCCHHHHHHHHHHHhh
Q psy9639         249 FTLKTPQRWYQFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       249 F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~  277 (321)
                      |.|.++.|+|+|.|+|++||++||.+|++
T Consensus        78 f~i~t~~r~y~l~A~s~ee~~~Wi~~I~~  106 (108)
T cd01266          78 FDIETIVRDLYLVAKNEEEMTLWVNCICK  106 (108)
T ss_pred             EEEEeCCccEEEEECCHHHHHHHHHHHHh
Confidence            99999999999888888888888888865

Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str

>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain

Probab=99.81  E-value=1.5e-19  Score=140.78  Aligned_cols=91  Identities=20%  Similarity=0.337  Sum_probs=72.6

Q ss_pred             eeeEEEeecCC-CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEE--Ee----ccCCCC-CCceeEEEEeecC
Q psy9639          59 MDGFLMKRGKE-SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNV--VI----APSKIE-HPHSLQLTFMKDG  129 (321)
Q Consensus        59 ~~G~L~K~g~~-~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~--~~----~~~~~~-~~~~~~i~~~~~~  129 (321)
                      |+|||.|+|+. .++|++|||||.  ++.|.||++ .+..|+|.|+|..+..  .+    .+...+ +.++|+|    .+
T Consensus         1 KeG~L~K~g~~~~k~wkkRwFvL~--~~~L~Yyk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i----~t   74 (103)
T cd01251           1 KEGFMEKTGPKHTEGFKKRWFTLD--DRRLMYFKDPLDAFAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTL----VT   74 (103)
T ss_pred             CceeEEecCCCCCCCceeEEEEEe--CCEEEEECCCCCcCcCcEEEeeccccceeEeccCCccccccccceEEE----Ee
Confidence            68999999987 589999999999  999999999 8999999999986531  11    111112 2235554    45


Q ss_pred             ceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         130 STRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       130 ~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      +.|+|+|.|+|++|+.+|+++|+.+.
T Consensus        75 ~~Rty~l~a~s~~e~~~Wi~ai~~v~  100 (103)
T cd01251          75 PERKFLFACETEQDRREWIAAFQNVL  100 (103)
T ss_pred             CCeEEEEECCCHHHHHHHHHHHHHHh
Confidence            68999999999999999999998763

Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici

>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain

Probab=99.81  E-value=4.2e-19  Score=137.79  Aligned_cols=96  Identities=26%  Similarity=0.433  Sum_probs=74.1

Q ss_pred             eeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEec-cCCCCCC-c-eeEEEEeecCceEEE
Q psy9639          59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIA-PSKIEHP-H-SLQLTFMKDGSTRHI  134 (321)
Q Consensus        59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~-~~~~~~~-~-~~~i~~~~~~~~R~~  134 (321)
                      .+|||.|+|+..++|++|||||...++.|.||++ .+..|+|+|+|+.+..+.. ....+.+ + .-...|.+.++.|+|
T Consensus         1 ~~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~t~~r~~   80 (101)
T cd01235           1 CEGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFEDTAEKGCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLKTSKRTY   80 (101)
T ss_pred             CeEEEEEcCCCCCCccceEEEEECCCCEEEEecCCCCCccceEEEcceeEEEeecCCCCCCCCCCCCceEEEEEeCCceE
Confidence            4899999999999999999999844569999999 8899999999999865432 1111111 0 111224445677999


Q ss_pred             EEEeCChHHHHHHHHHHHhh
Q psy9639         135 YVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a  154 (321)
                      +|+|+|++++.+|+.+|+++
T Consensus        81 ~~~a~s~~e~~~Wi~ai~~~  100 (101)
T cd01235          81 NFLAENINEAQRWKEKIQQC  100 (101)
T ss_pred             EEECCCHHHHHHHHHHHHhh
Confidence            99999999999999999864

Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .

>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain

Probab=99.80  E-value=4e-19  Score=136.77  Aligned_cols=91  Identities=22%  Similarity=0.438  Sum_probs=75.8

Q ss_pred             ceeeEEEeecCCCC----CceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639          58 HMDGFLMKRGKESG----KYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR  132 (321)
Q Consensus        58 ~~~G~L~K~g~~~~----~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R  132 (321)
                      .++|||+|+++..+    .|++|||||.  ++.|.||++ .+..|.|+|+|++..+.... ...++++|+|.   ....|
T Consensus         1 ~~~GwL~kk~~~~g~~~k~WkkrwfvL~--~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~-~~~k~~~F~I~---~~~~~   74 (96)
T cd01260           1 DCDGWLWKRKKPGGFMGQKWARRWFVLK--GTTLYWYRSKQDEKAEGLIFLSGFTIESAK-EVKKKYAFKVC---HPVYK   74 (96)
T ss_pred             CceeEEEEecCCCCccccCceeEEEEEE--CCEEEEECCCCCCccceEEEccCCEEEEch-hcCCceEEEEC---CCCCc
Confidence            36999999987766    9999999999  999999999 88999999999998554332 23467777764   22239


Q ss_pred             EEEEEeCChHHHHHHHHHHHhh
Q psy9639         133 HIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       133 ~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      +|+|+|+|++++.+|+.+|++|
T Consensus        75 ~~~f~a~s~~e~~~Wi~ai~~~   96 (96)
T cd01260          75 SFYFAAETLDDLSQWVNHLITA   96 (96)
T ss_pred             EEEEEeCCHHHHHHHHHHHHhC
Confidence            9999999999999999999864

Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet

>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain

Probab=99.80  E-value=3.6e-19  Score=136.68  Aligned_cols=91  Identities=16%  Similarity=0.339  Sum_probs=74.1

Q ss_pred             eeeEEEeecCC--CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639          59 MDGFLMKRGKE--SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY  135 (321)
Q Consensus        59 ~~G~L~K~g~~--~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~  135 (321)
                      ++|||.|+|+.  .++|++|||||..+.+.|.||++ .+..|+|+|+|.++..+..+.  ..++.|+|    .+++|+|+
T Consensus         1 l~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~d~~p~G~I~L~~~~~~~~~~--~~~~~F~i----~t~~r~y~   74 (95)
T cd01265           1 LCGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQDAKPLGRVDLSGAAFTYDPR--EEKGRFEI----HSNNEVIA   74 (95)
T ss_pred             CcccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCCcccccceEECCccEEEcCCC--CCCCEEEE----EcCCcEEE
Confidence            37999999874  58999999999843468999999 899999999999986544332  23566665    35679999


Q ss_pred             EEeCChHHHHHHHHHHHhhh
Q psy9639         136 VYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       136 l~a~s~~e~~~W~~aLr~a~  155 (321)
                      |.|+|++++.+|+++|+.++
T Consensus        75 l~A~s~~e~~~Wi~al~~~~   94 (95)
T cd01265          75 LKASSDKQMNYWLQALQSKR   94 (95)
T ss_pred             EECCCHHHHHHHHHHHHhhc
Confidence            99999999999999998654

PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain

Probab=99.79  E-value=1.2e-18  Score=132.18  Aligned_cols=88  Identities=30%  Similarity=0.504  Sum_probs=75.1

Q ss_pred             eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC--CcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-eE
Q psy9639         181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA--YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-RW  257 (321)
Q Consensus       181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~--~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-r~  257 (321)
                      ++|||.|+++.. +.|++|||+|+++.|+||+++.+.  .|.|.|+|..    +.+....     ..+++|.|.+++ ++
T Consensus         1 ~~G~L~k~~~~~-~~W~~r~~vl~~~~L~~~~~~~~~~~~~~~~i~l~~----~~~~~~~-----~~~~~F~i~~~~~~~   70 (91)
T cd01246           1 VEGWLLKWTNYL-KGWQKRWFVLDNGLLSYYKNKSSMRGKPRGTILLSG----AVISEDD-----SDDKCFTIDTGGDKT   70 (91)
T ss_pred             CeEEEEEecccC-CCceeeEEEEECCEEEEEecCccCCCCceEEEEece----EEEEECC-----CCCcEEEEEcCCCCE
Confidence            489999999887 899999999999999999999887  8999999965    4444321     236899999887 99


Q ss_pred             EEEEcCCHHHHHHHHHHHhhc
Q psy9639         258 YQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       258 ~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      |+|+|+|.+|+++||.||++|
T Consensus        71 ~~~~a~s~~e~~~Wi~al~~a   91 (91)
T cd01246          71 LHLRANSEEERQRWVDALELA   91 (91)
T ss_pred             EEEECCCHHHHHHHHHHHHhC
Confidence            999999999999999998875

Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain

Probab=99.79  E-value=1.3e-18  Score=133.51  Aligned_cols=90  Identities=13%  Similarity=0.076  Sum_probs=67.8

Q ss_pred             EEEEEeC---CCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEE
Q psy9639         183 GWLWKTG---PKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQ  259 (321)
Q Consensus       183 G~L~K~g---~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~  259 (321)
                      |.|.|++   +...++||+|||+|+++.|+||+++. ..|+|+|+|..+   ..|..+. ......+++|+|++++|+|+
T Consensus         5 ~~~~kr~~~~~~~~~n~KkRwF~Lt~~~L~Y~k~~~-~~~~g~I~L~~i---~~ve~v~-~~~~~~~~~fqivt~~r~~y   79 (98)
T cd01244           5 LQQVDRSRLAWKKVLHFKKRYFQLTTTHLSWAKDVQ-CKKSALIKLAAI---KGTEPLS-DKSFVNVDIITIVCEDDTMQ   79 (98)
T ss_pred             cEEEEcccCCCccCcCCceeEEEECCCEEEEECCCC-CceeeeEEccce---EEEEEcC-CcccCCCceEEEEeCCCeEE
Confidence            4455544   23347899999999999999999987 479999999876   3344333 22234568999999999999


Q ss_pred             EEcCCHHHHHHHHHHHhh
Q psy9639         260 FSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       260 f~A~s~~e~~~Wv~aL~~  277 (321)
                      |+|+|++|+++||.||+.
T Consensus        80 i~a~s~~E~~~Wi~al~k   97 (98)
T cd01244          80 LQFEAPVEATDWLNALEK   97 (98)
T ss_pred             EECCCHHHHHHHHHHHhc
Confidence            777777777777777765

RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain

Probab=99.79  E-value=1.5e-18  Score=132.56  Aligned_cols=92  Identities=34%  Similarity=0.607  Sum_probs=74.9

Q ss_pred             eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEE
Q psy9639         181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWY  258 (321)
Q Consensus       181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~  258 (321)
                      ++|||.|+++...+.|++|||+|+++.|.||+++.+  ..+.+.|+|..    ++|.... .. ..++++|.|.+++++|
T Consensus         1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~~~~~~~~~i~l~~----~~v~~~~-~~-~~~~~~f~i~~~~~~~   74 (94)
T cd01250           1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKDYDNAHVKEIDLRR----CTVRHNG-KQ-PDRRFCFEVISPTKTW   74 (94)
T ss_pred             CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCcccccccceEEeccc----eEEecCc-cc-cCCceEEEEEcCCcEE
Confidence            589999998763379999999999999999999876  56889999953    4454322 11 1367899999999999


Q ss_pred             EEEcCCHHHHHHHHHHHhhc
Q psy9639         259 QFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       259 ~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      +|+|+|++++++||.||+++
T Consensus        75 ~f~a~s~~~~~~Wi~al~~~   94 (94)
T cd01250          75 HFQADSEEERDDWISAIQES   94 (94)
T ss_pred             EEECCCHHHHHHHHHHHhcC
Confidence            99999999999999999764

Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain

Probab=99.79  E-value=5.3e-19  Score=135.28  Aligned_cols=91  Identities=20%  Similarity=0.240  Sum_probs=72.3

Q ss_pred             eEEEEEEeCCCCCCCcceEEEEEeC----CeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCe
Q psy9639         181 REGWLWKTGPKNADAYRKRWFTLDY----RKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQR  256 (321)
Q Consensus       181 k~G~L~K~g~~~~~~WkkRwfvL~~----~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r  256 (321)
                      +.|||.|+|+...+.||+|||+|.+    +.|+||+++.+..|+|.|+|..+    .|.++. ++..+++|||+|+++.+
T Consensus         1 ~~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~~~p~gli~l~~~----~V~~v~-ds~~~r~~cFel~~~~~   75 (98)
T cd01245           1 KKGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKKTKPIGLIDLSDA----YLYPVH-DSLFGRPNCFQIVERAL   75 (98)
T ss_pred             CCCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCCCCccceeecccc----EEEEcc-ccccCCCeEEEEecCCC
Confidence            3699999998724899999999986    99999999999999999999653    455433 23346789999999875


Q ss_pred             --EEEEEcCCHHHHHHHHHHHhh
Q psy9639         257 --WYQFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       257 --~~~f~A~s~~e~~~Wv~aL~~  277 (321)
                        +|+++|++ +|+++||++|+.
T Consensus        76 ~~~y~~~a~~-~er~~Wi~~l~~   97 (98)
T cd01245          76 PTVYYSCRSS-EERDKWIESLQA   97 (98)
T ss_pred             CeEEEEeCCH-HHHHHHHHHHhc
Confidence              89977666 777777777654

RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01264 PH_melted Melted pleckstrin homology (PH) domain

Probab=99.79  E-value=9.3e-19  Score=134.45  Aligned_cols=94  Identities=17%  Similarity=0.317  Sum_probs=73.5

Q ss_pred             eeeEEEeecC---CCCCceeeEEEEeccCCeEEeecC-CCCCce-eEEeccceEEEeccCCCCCCceeEEEEeecCceEE
Q psy9639          59 MDGFLMKRGK---ESGKYHPRRFVLNEINDTIKYYVK-EKKEPK-ATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRH  133 (321)
Q Consensus        59 ~~G~L~K~g~---~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pk-g~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~  133 (321)
                      .+|||.|+|+   ..++|++|||||.  ++.|.||++ ....|. |+|+|+++..+-..+..........+|.+.++.|+
T Consensus         2 ~~G~l~k~~g~~r~~K~WkrRwF~L~--~~~L~y~K~~~~~~~~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~rt   79 (101)
T cd01264           2 IEGQLKEKKGRWRFIKRWKTRYFTLS--GAQLLFQKGKSKDDPDDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTADKT   79 (101)
T ss_pred             cceEEeecCccceeeecceeEEEEEe--CCEEEEEeccCccCCCCceEEcccceEEeeccccccccccCcEEEEEcCCce
Confidence            4899999999   7899999999999  999999999 565666 99999999765432211111112233455577899


Q ss_pred             EEEEeCChHHHHHHHHHHHhh
Q psy9639         134 IYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       134 ~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      |||+|+|++++.+|+++|..|
T Consensus        80 ~~l~A~se~e~e~WI~~i~~a  100 (101)
T cd01264          80 YILKAKDEKNAEEWLQCLNIA  100 (101)
T ss_pred             EEEEeCCHHHHHHHHHHHHhh
Confidence            999999999999999999765

Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain

Probab=99.78  E-value=2.8e-18  Score=130.48  Aligned_cols=87  Identities=17%  Similarity=0.312  Sum_probs=71.3

Q ss_pred             eeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC--CCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639          59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK--KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY  135 (321)
Q Consensus        59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~--~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~  135 (321)
                      ++|||.|+|...++|++|||||.  ++.|.||++ .+  ..|+|+|+|+.+.....+   ..++.|.|.   .++.|+|+
T Consensus         1 ~~G~L~K~~~~~k~Wk~RwFvL~--~g~L~Yyk~~~~~~~~~~G~I~L~~~~i~~~~---~~~~~F~i~---~~~~r~~~   72 (91)
T cd01247           1 TNGVLSKWTNYINGWQDRYFVLK--EGNLSYYKSEAEKSHGCRGSIFLKKAIIAAHE---FDENRFDIS---VNENVVWY   72 (91)
T ss_pred             CceEEEEeccccCCCceEEEEEE--CCEEEEEecCccCcCCCcEEEECcccEEEcCC---CCCCEEEEE---eCCCeEEE
Confidence            47999999999999999999998  999999999 55  458999999998543221   335666653   23349999


Q ss_pred             EEeCChHHHHHHHHHHHh
Q psy9639         136 VYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       136 l~a~s~~e~~~W~~aLr~  153 (321)
                      |.|+|++++.+|+++|..
T Consensus        73 L~A~s~~e~~~Wi~al~~   90 (91)
T cd01247          73 LRAENSQSRLLWMDSVVR   90 (91)
T ss_pred             EEeCCHHHHHHHHHHHhh
Confidence            999999999999999974

Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt

>cd01241 PH_Akt Akt pleckstrin homology (PH) domain

Probab=99.77  E-value=3.6e-18  Score=132.82  Aligned_cols=93  Identities=25%  Similarity=0.344  Sum_probs=65.6

Q ss_pred             cceEEEEEEeCCCCCCCcceEEEEEe-CCeeEeeeCCCCCCcceeEEcccccCceEEecCCCC-CCCCCCceEEEE----
Q psy9639         179 FGREGWLWKTGPKNADAYRKRWFTLD-YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP-GAKDQGFTFTLK----  252 (321)
Q Consensus       179 ~~k~G~L~K~g~~~~~~WkkRwfvL~-~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~-~~~~~~~~F~i~----  252 (321)
                      ++++|||.|+|+.. +.|++|||+|+ ++.|.||++.....+.|.|+|+.    ++|..+.+. ....++++|.|.    
T Consensus         1 v~k~G~L~K~g~~~-~~Wk~R~f~L~~~~~l~~yk~~~~~~~~~~i~l~~----~~v~~~~~~~~~~~~~~~F~i~~~~~   75 (102)
T cd01241           1 VVKEGWLHKRGEYI-KTWRPRYFLLKSDGSFIGYKEKPEDGDPFLPPLNN----FSVAECQLMKTERPRPNTFIIRCLQW   75 (102)
T ss_pred             CcEEEEEEeecCCC-CCCeeEEEEEeCCCeEEEEecCCCccCccccccCC----eEEeeeeeeeccCCCcceEEEEeccC
Confidence            47999999999987 89999999999 78888888765544567888844    444333221 112456789997    


Q ss_pred             --eCCeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         253 --TPQRWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       253 --t~~r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                        +++|+|  +|+|++|+++||+||+.+
T Consensus        76 ~~~~~r~f--~a~s~ee~~eWi~ai~~v  101 (102)
T cd01241          76 TTVIERTF--HVESPEEREEWIHAIQTV  101 (102)
T ss_pred             CcccCEEE--EeCCHHHHHHHHHHHHhh
Confidence              346765  467777777777777654

Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain

Probab=99.77  E-value=5e-18  Score=137.06  Aligned_cols=96  Identities=18%  Similarity=0.424  Sum_probs=79.3

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeec--------
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKD--------  128 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~--------  128 (321)
                      .++|||+|+|+..+.|++|||||.  ++.|.||++ ++..|+|+|+|+++.+...+ ..+.+++|+|....+        
T Consensus         1 ~k~G~L~K~~~~~~~WkkRwfvL~--~~~L~yyk~~~~~~~~g~I~L~~~~v~~~~-~~~~~~~F~i~~~~~~~~i~~~~   77 (125)
T cd01252           1 DREGWLLKQGGRVKTWKRRWFILT--DNCLYYFEYTTDKEPRGIIPLENVSIREVE-DPSKPFCFELFSPSDKQQIKACK   77 (125)
T ss_pred             CcEEEEEEeCCCCCCeEeEEEEEE--CCEEEEEcCCCCCCceEEEECCCcEEEEcc-cCCCCeeEEEECCcccccccccc
Confidence            378999999999999999999999  899999999 88999999999987654432 235678887743222        


Q ss_pred             ---------CceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         129 ---------GSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       129 ---------~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                               +..+.|+|+|+|++++.+|+.+|+.+..
T Consensus        78 ~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~  114 (125)
T cd01252          78 TESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASIS  114 (125)
T ss_pred             ccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence                     2347888999999999999999987754

Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01238 PH_Tec Tec pleckstrin homology (PH) domain

Probab=99.77  E-value=2.8e-18  Score=134.32  Aligned_cols=90  Identities=20%  Similarity=0.429  Sum_probs=70.9

Q ss_pred             ceeeEEEeecCCCC-----CceeeEEEEeccCCeEEeecC-CC--CCceeEEeccceEEEe-ccCCC------CCCceeE
Q psy9639          58 HMDGFLMKRGKESG-----KYHPRRFVLNEINDTIKYYVK-EK--KEPKATLRISELNVVI-APSKI------EHPHSLQ  122 (321)
Q Consensus        58 ~~~G~L~K~g~~~~-----~wk~R~fvL~~~~~~L~Yy~~-~~--~~pkg~I~l~~~~~~~-~~~~~------~~~~~~~  122 (321)
                      +++|+|+|+++..+     +|++|||||.  +++|.||++ .+  ..|+|.|+|..+..+- .++..      ...++|+
T Consensus         1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~--~~~L~Yyk~~~~~~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~   78 (106)
T cd01238           1 ILESILVKRSQQKKKTSPLNYKERLFVLT--KSKLSYYEGDFEKRGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQ   78 (106)
T ss_pred             CcceeeeeeccCCCCCCCCCceeEEEEEc--CCEEEEECCCcccccCcceeEECCcceEEEEecCCcCcccccccCccEE
Confidence            47999999986543     8999999998  999999999 54  5899999999985542 11111      2345555


Q ss_pred             EEEeecCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639         123 LTFMKDGSTRHIYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       123 i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~  153 (321)
                      |.    ++.|+||+.|+|++|+.+|+.+|++
T Consensus        79 i~----t~~r~~yl~A~s~~er~~WI~ai~~  105 (106)
T cd01238          79 VV----HDEGTLYVFAPTEELRKRWIKALKQ  105 (106)
T ss_pred             EE----eCCCeEEEEcCCHHHHHHHHHHHHh
Confidence            53    4569999999999999999999985

Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis

>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain

Probab=99.76  E-value=5.8e-18  Score=131.18  Aligned_cols=89  Identities=16%  Similarity=0.334  Sum_probs=70.7

Q ss_pred             eeeEEEeecCC---------CCCceeeEEEEeccCCeEEeecC--CCCCceeEEeccceEEEeccC-CCCCCceeEEEEe
Q psy9639          59 MDGFLMKRGKE---------SGKYHPRRFVLNEINDTIKYYVK--EKKEPKATLRISELNVVIAPS-KIEHPHSLQLTFM  126 (321)
Q Consensus        59 ~~G~L~K~g~~---------~~~wk~R~fvL~~~~~~L~Yy~~--~~~~pkg~I~l~~~~~~~~~~-~~~~~~~~~i~~~  126 (321)
                      ++|||.|.++.         .++||||||||. +++.|.||++  .+..|+|+|+|+.+..+...+ ..+++++|.|   
T Consensus         1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~-~~~~L~y~~d~~~~~~p~G~IdL~~~~~V~~~~~~~~~~~~f~I---   76 (104)
T cd01236           1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILY-DHGLLTYALDEMPTTLPQGTIDMNQCTDVVDAEARTGQKFSICI---   76 (104)
T ss_pred             CcceeEEcCCCCcccccceeeccccceEEEEe-CCCEEEEeeCCCCCcccceEEEccceEEEeecccccCCccEEEE---
Confidence            47999998765         467999999998 2567777766  478999999999987665332 3455667665   


Q ss_pred             ecCceEEEEEEeCChHHHHHHHHHHH
Q psy9639         127 KDGSTRHIYVYHEESQSIMNWYHAIR  152 (321)
Q Consensus       127 ~~~~~R~~~l~a~s~~e~~~W~~aLr  152 (321)
                       .++.|+|||.|+|++|+.+|+++|.
T Consensus        77 -~tp~R~f~l~Aete~E~~~Wi~~l~  101 (104)
T cd01236          77 -LTPDKEHFIKAETKEEISWWLNMLM  101 (104)
T ss_pred             -ECCCceEEEEeCCHHHHHHHHHHHH
Confidence             4667999999999999999999986

Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain

Probab=99.75  E-value=9e-18  Score=132.04  Aligned_cols=93  Identities=18%  Similarity=0.293  Sum_probs=71.1

Q ss_pred             eeeEEEeecCCC----CCceeeEEEEeccCCe-------EEeecC-CCCCceeEEeccceEEEecc-CCCCCCceeEEEE
Q psy9639          59 MDGFLMKRGKES----GKYHPRRFVLNEINDT-------IKYYVK-EKKEPKATLRISELNVVIAP-SKIEHPHSLQLTF  125 (321)
Q Consensus        59 ~~G~L~K~g~~~----~~wk~R~fvL~~~~~~-------L~Yy~~-~~~~pkg~I~l~~~~~~~~~-~~~~~~~~~~i~~  125 (321)
                      .+|||.|+|+..    ++|++|||||.  ++.       |.||++ .+..|+|+|+|+.+..+-.. .....+..+++.|
T Consensus         1 ~eGwL~K~~~~~~~~~~~WkrRwFvL~--~~~l~~~~~~L~Yyk~~~~~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~f   78 (108)
T cd01266           1 LEGWLKKSPPYKLLFRTKWVRRYFVLH--CGDRERNLFALEYYKTSRKFKLEFVIDLESCSQVDPGLLCTAGNCIFGYGF   78 (108)
T ss_pred             CceeeeeCCccccccccCcEEEEEEEe--ccccCCCcceEEEECCCCCCccceEEECCccEEEcccccccccCcccceEE
Confidence            489999999854    49999999998  554       699999 88999999999997553211 0011122333445


Q ss_pred             eecCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639         126 MKDGSTRHIYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       126 ~~~~~~R~~~l~a~s~~e~~~W~~aLr~  153 (321)
                      .+.++.|+|||.|+|++++.+|+.+|++
T Consensus        79 ~i~t~~r~y~l~A~s~ee~~~Wi~~I~~  106 (108)
T cd01266          79 DIETIVRDLYLVAKNEEEMTLWVNCICK  106 (108)
T ss_pred             EEEeCCccEEEEECCHHHHHHHHHHHHh
Confidence            5556789999999999999999999975

Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str

>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]

Probab=99.73  E-value=5.5e-17  Score=124.87  Aligned_cols=96  Identities=35%  Similarity=0.585  Sum_probs=76.4

Q ss_pred             cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCC---CCCcceeEEcccccCceEEecCCCCC---CCCCCceEEEE
Q psy9639         179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPL---SAYPKGEIFLGHCSDGYTVRLGVPPG---AKDQGFTFTLK  252 (321)
Q Consensus       179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~---~~~~~g~i~L~~~~~~~~V~~~~~~~---~~~~~~~F~i~  252 (321)
                      ++++|||.+++... +.|++|||+|.++.|+||+++.   +..+.+.|+|..    +.|.......   ....+++|.|.
T Consensus         1 ~~~~G~L~~~~~~~-~~wk~r~~vL~~~~L~~~~~~~~~~~~~~~~~i~l~~----~~v~~~~~~~~~~~~~~~~~f~i~   75 (104)
T PF00169_consen    1 CIKEGWLLKKSSSR-KKWKKRYFVLRDSYLLYYKSSKDKSDSKPKGSIPLDD----CTVRPDPSSDFLSNKKRKNCFEIT   75 (104)
T ss_dssp             EEEEEEEEEEESSS-SSEEEEEEEEETTEEEEESSTTTTTESSESEEEEGTT----EEEEEETSSTSTSTSSSSSEEEEE
T ss_pred             CEEEEEEEEECCCC-CCeEEEEEEEECCEEEEEecCccccceeeeEEEEecC----ceEEEcCccccccccCCCcEEEEE
Confidence            46899999999665 7999999999999999999998   678999999954    5565533221   23567999999


Q ss_pred             eCCe-EEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         253 TPQR-WYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       253 t~~r-~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ++++ +|+|+|+|++++..|+++|+.++
T Consensus        76 ~~~~~~~~~~~~s~~~~~~W~~~i~~~~  103 (104)
T PF00169_consen   76 TPNGKSYLFSAESEEERKRWIQAIQKAI  103 (104)
T ss_dssp             ETTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             eCCCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence            9875 99977777777777777777654

The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....

>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain

Probab=99.71  E-value=8.8e-17  Score=124.10  Aligned_cols=86  Identities=24%  Similarity=0.412  Sum_probs=69.4

Q ss_pred             cceeeEEEeecCCCCCceeeEEEEeccCC------eEEeecC-CC-----CCceeEEeccceEEEeccCCCCCCceeEEE
Q psy9639          57 GHMDGFLMKRGKESGKYHPRRFVLNEIND------TIKYYVK-EK-----KEPKATLRISELNVVIAPSKIEHPHSLQLT  124 (321)
Q Consensus        57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~------~L~Yy~~-~~-----~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~  124 (321)
                      ..++|||.|+    +.|+||||||.  ++      .|.||++ .+     ..|+|+|.|.++..+.......+.|+|.| 
T Consensus         2 v~k~GyL~K~----K~~kkRwFVLr--~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d~k~~~~f~i-   74 (101)
T cd01257           2 VRKSGYLRKQ----KSMHKRFFVLR--AESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRADAKHRHLIAL-   74 (101)
T ss_pred             ccEEEEEeEe----cCcEeEEEEEe--cCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeeccccccCeEEEE-
Confidence            4689999998    78999999998  45      7999999 43     78999999999976543323334466555 


Q ss_pred             EeecCceEEEEEEeCChHHHHHHHHHHH
Q psy9639         125 FMKDGSTRHIYVYHEESQSIMNWYHAIR  152 (321)
Q Consensus       125 ~~~~~~~R~~~l~a~s~~e~~~W~~aLr  152 (321)
                         .++.|+|+|.|+|++|+.+|+.+|.
T Consensus        75 ---~t~dr~f~l~aese~E~~~Wi~~i~   99 (101)
T cd01257          75 ---YTRDEYFAVAAENEAEQDSWYQALL   99 (101)
T ss_pred             ---EeCCceEEEEeCCHHHHHHHHHHHh
Confidence               3466999999999999999999985

Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.

>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain

Probab=99.70  E-value=5.6e-17  Score=124.14  Aligned_cols=92  Identities=16%  Similarity=0.227  Sum_probs=74.5

Q ss_pred             eeeEEEeecCC-CCCceeeEEEEec--cCCeEEeecC-CCCCceeEEeccceEEEe-ccCCCCCCceeEEEEeecCceEE
Q psy9639          59 MDGFLMKRGKE-SGKYHPRRFVLNE--INDTIKYYVK-EKKEPKATLRISELNVVI-APSKIEHPHSLQLTFMKDGSTRH  133 (321)
Q Consensus        59 ~~G~L~K~g~~-~~~wk~R~fvL~~--~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~-~~~~~~~~~~~~i~~~~~~~~R~  133 (321)
                      +.|||.|+|+. .+.||+|||+|..  .++.|.||++ .+.+|+|.|+|+++.+.. +....+.||+|++.....  .++
T Consensus         1 ~~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~~~p~gli~l~~~~V~~v~ds~~~r~~cFel~~~~~--~~~   78 (98)
T cd01245           1 KKGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKKTKPIGLIDLSDAYLYPVHDSLFGRPNCFQIVERAL--PTV   78 (98)
T ss_pred             CCCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCCCCccceeeccccEEEEccccccCCCeEEEEecCCC--CeE
Confidence            36999999998 8999999999971  1399999999 999999999999994432 233568899999853211  258


Q ss_pred             EEEEeCChHHHHHHHHHHHh
Q psy9639         134 IYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       134 ~~l~a~s~~e~~~W~~aLr~  153 (321)
                      ||++|++ +|+++||++|+.
T Consensus        79 y~~~a~~-~er~~Wi~~l~~   97 (98)
T cd01245          79 YYSCRSS-EERDKWIESLQA   97 (98)
T ss_pred             EEEeCCH-HHHHHHHHHHhc
Confidence            8999999 999999999974

RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain

Probab=99.70  E-value=2.5e-16  Score=119.42  Aligned_cols=88  Identities=19%  Similarity=0.397  Sum_probs=73.5

Q ss_pred             eeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCC--CceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639          59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKK--EPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY  135 (321)
Q Consensus        59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~--~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~  135 (321)
                      ++|||+|+++..+.|++|||||.  ++.|.||++ .+.  .|.|.|.|+.+.+...+   ..++.|+|..   ..+++++
T Consensus         1 ~~G~L~k~~~~~~~W~~r~~vl~--~~~L~~~~~~~~~~~~~~~~i~l~~~~~~~~~---~~~~~F~i~~---~~~~~~~   72 (91)
T cd01246           1 VEGWLLKWTNYLKGWQKRWFVLD--NGLLSYYKNKSSMRGKPRGTILLSGAVISEDD---SDDKCFTIDT---GGDKTLH   72 (91)
T ss_pred             CeEEEEEecccCCCceeeEEEEE--CCEEEEEecCccCCCCceEEEEeceEEEEECC---CCCcEEEEEc---CCCCEEE
Confidence            58999999998899999999999  999999999 666  89999999998543322   3467777642   2239999


Q ss_pred             EEeCChHHHHHHHHHHHhh
Q psy9639         136 VYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       136 l~a~s~~e~~~W~~aLr~a  154 (321)
                      |+|+|.+++.+|+.+|+.|
T Consensus        73 ~~a~s~~e~~~Wi~al~~a   91 (91)
T cd01246          73 LRANSEEERQRWVDALELA   91 (91)
T ss_pred             EECCCHHHHHHHHHHHHhC
Confidence            9999999999999999864

Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain

Probab=99.69  E-value=2.4e-16  Score=120.19  Aligned_cols=90  Identities=17%  Similarity=0.345  Sum_probs=73.0

Q ss_pred             eeeEEEeecCC-CCCceeeEEEEeccCCeEEeecC-CC--CCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEE
Q psy9639          59 MDGFLMKRGKE-SGKYHPRRFVLNEINDTIKYYVK-EK--KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHI  134 (321)
Q Consensus        59 ~~G~L~K~g~~-~~~wk~R~fvL~~~~~~L~Yy~~-~~--~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~  134 (321)
                      ++|||.|+++. .+.|++|||||.  ++.|.||++ .+  ..|.+.|+|..+.+...+.....+++|+|.    .+.++|
T Consensus         1 k~G~L~kk~~~~~~~W~kr~~~L~--~~~l~~y~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~f~i~----~~~~~~   74 (94)
T cd01250           1 KQGYLYKRSSKSNKEWKKRWFVLK--NGQLTYHHRLKDYDNAHVKEIDLRRCTVRHNGKQPDRRFCFEVI----SPTKTW   74 (94)
T ss_pred             CcceEEEECCCcCCCceEEEEEEe--CCeEEEEcCCcccccccceEEeccceEEecCccccCCceEEEEE----cCCcEE
Confidence            58999999876 789999999999  999999998 54  788899999987554444322356677764    344999


Q ss_pred             EEEeCChHHHHHHHHHHHhh
Q psy9639         135 YVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a  154 (321)
                      +|+|+|.+++.+|+.+|+++
T Consensus        75 ~f~a~s~~~~~~Wi~al~~~   94 (94)
T cd01250          75 HFQADSEEERDDWISAIQES   94 (94)
T ss_pred             EEECCCHHHHHHHHHHHhcC
Confidence            99999999999999999753

Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain

Probab=99.68  E-value=3.5e-16  Score=125.34  Aligned_cols=95  Identities=21%  Similarity=0.407  Sum_probs=75.8

Q ss_pred             eEEEEEEeCCCCC-----------------CCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCC---
Q psy9639         181 REGWLWKTGPKNA-----------------DAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP---  240 (321)
Q Consensus       181 k~G~L~K~g~~~~-----------------~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~---  240 (321)
                      |+|||.|+++...                 ..|++|||+|+++.|.||+++.+..++|+|.+.   .++.|......   
T Consensus         1 keG~i~kr~g~~~~~~~~~~~~~~~~~~~~~~w~kRWFvlr~s~L~Y~~~~~~~~~~~vil~D---~~f~v~~~~~~~~~   77 (121)
T cd01254           1 KEGYIMKRSGGKRSGSDDCSFGCCCFCRMCDRWQKRWFIVKESFLAYMDDPSSAQILDVILFD---VDFKVNGGGKEDIS   77 (121)
T ss_pred             CCceEEeCCCCCcCCcccccccccCCcccccCCcceeEEEeCCEEEEEcCCCCCceeeEEEEc---CCccEEeCCccccc
Confidence            5899998765421                 169999999999999999999999999999995   45777654322   


Q ss_pred             ------CCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         241 ------GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       241 ------~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                            +.....++|.|.+++|+|.|.|+|+.++++||++|+.|
T Consensus        78 ~~~~~~~~~~~~~~~~i~t~~R~~~l~a~s~~~~~~Wi~~i~~a  121 (121)
T cd01254          78 LAVELKDITGLRHGLKITNSNRSLKLKCKSSRKLKQWMASIEDA  121 (121)
T ss_pred             ccccccccCCCceEEEEEcCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence                  11245689999999999998888888888888888764

Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG0703|consensus

Probab=99.68  E-value=3.9e-18  Score=151.92  Aligned_cols=171  Identities=30%  Similarity=0.493  Sum_probs=124.4

Q ss_pred             CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcccccCC-Cccccccce-eeE--EEeecCCCCCceee
Q psy9639           1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE-ALTYITGHM-DGF--LMKRGKESGKYHPR   76 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~-~~~~~~~~~-~G~--L~K~g~~~~~wk~R   76 (321)
                      |..+||.+||++||++||..|++|++++   ++|+|||+|||+++|+.++ +.++..+.+ +++  ++|.++...+-..|
T Consensus        81 m~~~GN~~an~~~ea~~p~~~~~p~~d~---~~e~FIR~KYE~kkf~~~~~~~~s~~~~~~~~~k~~~~~~~~~~~s~s~  157 (287)
T KOG0703|consen   81 MISMGNAKANSYYEAKLPDPFRRPGPDD---LVEQFIRDKYERKKFLDPEEDITSKPGSRDEESKRSDKRSRKLSSSLSR  157 (287)
T ss_pred             HHHHcchhhhhhccccCCccccCCChHH---HHHHHHHHHHhhhhhccchhhcccCCCcccccccccccCccccccchhh
Confidence            7889999999999999999999999998   8899999999999999986 555544444 344  68888888888888


Q ss_pred             EEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639          77 RFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus        77 ~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      -|+...+.+.++|+.. ..       ........+.+. +++.++.+..+ ..++.++.+-   +..+...|.. .+...
T Consensus       158 ~~~~~~r~~~~~~~~~~~s-------~~~~~~~~~~~~-~~~i~~~~~~~-~~~s~~n~~~---~~~~~~~~~~-~~~~~  224 (287)
T KOG0703|consen  158 SFVKSAREDQLKYFLPKTS-------QPVDDLATFQGP-IASPHNLQTTY-SLNSTLNIFG---SGKEAADSFT-LRAAR  224 (287)
T ss_pred             hhhhhccccccccccccCC-------CCchhhhhccCc-cccccchheee-cccccccccc---CccccCCCcc-ccccc
Confidence            8887666888888888 44       222222334444 67778888777 7776776654   7777888888 77666


Q ss_pred             hhhccccCCCCChhhhhhhhCCCcceEEEEEEe
Q psy9639         156 FHRLQVAFPSANDSELVKLLTRDFGREGWLWKT  188 (321)
Q Consensus       156 ~~~l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~  188 (321)
                      +.....+.++.. .++.+........+++..+.
T Consensus       225 ~~~~~~~~~~~~-~~~~~~~~~~s~~~~f~~~~  256 (287)
T KOG0703|consen  225 FAPLAVAFSTVT-EDLVPFLQRNSLSEGFMEKT  256 (287)
T ss_pred             ccccccccccCc-cccccccccccccccccCcc
Confidence            666655566665 55555444455555555554

>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C

Probab=99.66  E-value=1.5e-15  Score=120.02  Aligned_cols=97  Identities=29%  Similarity=0.497  Sum_probs=53.8

Q ss_pred             eEEEEEEeCCCCCCCcceEEEEEe-CCeeEeeeCCC-------------CCCcceeEEcccccCceE-EecCCCCCCCCC
Q psy9639         181 REGWLWKTGPKNADAYRKRWFTLD-YRKLMYHEEPL-------------SAYPKGEIFLGHCSDGYT-VRLGVPPGAKDQ  245 (321)
Q Consensus       181 k~G~L~K~g~~~~~~WkkRwfvL~-~~~L~Yyk~~~-------------~~~~~g~i~L~~~~~~~~-V~~~~~~~~~~~  245 (321)
                      ++|||+|.++...++||+|||+|. ++.|.||+.+.             .....|.+.......... +....+.+ ...
T Consensus         1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   79 (112)
T PF15413_consen    1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKNPFG-EIH   79 (112)
T ss_dssp             EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS-------------TT-SB-SEEEE---GGGT-EEEES-T--S-S-S
T ss_pred             CCceEEEecCCCCcCccccEEEEEeCCEEEEeecccccccccccccchhceEeecccCcccccccccccccCCccc-CcC
Confidence            689999999983389999999999 99999999942             222334443322111111 11001111 123


Q ss_pred             CceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         246 GFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       246 ~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      ...|.|.||.|+|.|.|++.+|+..||+||+.|
T Consensus        80 ~~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~  112 (112)
T PF15413_consen   80 LKVFSIFTPTKTFHLRCETREDRYDWIEALQEA  112 (112)
T ss_dssp             SEEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred             CCCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence            467889999999997777777777777777654

>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain

Probab=99.65  E-value=1.7e-15  Score=117.53  Aligned_cols=93  Identities=19%  Similarity=0.296  Sum_probs=69.7

Q ss_pred             cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCC-----CCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe
Q psy9639         179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPL-----SAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT  253 (321)
Q Consensus       179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~-----~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t  253 (321)
                      ++++|||.|.+... +.|+.|||.|-++.|.|++...     ...+++.|+|.    ++.|....   ....+|+|.|.+
T Consensus         2 ~ikeG~L~K~~~~~-~~~k~RyffLFnd~Ll~~~~~~~~~~~~y~~~~~i~l~----~~~v~~~~---~~~~~~~F~I~~   73 (101)
T cd01219           2 LLKEGSVLKISSTT-EKTEERYLFLFNDLLLYCVPRKMIGGSKFKVRARIDVS----GMQVCEGD---NLERPHSFLVSG   73 (101)
T ss_pred             cccceEEEEEecCC-CCceeEEEEEeCCEEEEEEcccccCCCcEEEEEEEecc----cEEEEeCC---CCCcCceEEEec
Confidence            57999999999887 7999999999999999998532     22456788884    45665421   234679999999


Q ss_pred             CCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         254 PQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       254 ~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ++|+|+|+|+|++|+++||+||+.+|
T Consensus        74 ~~rsf~l~A~s~eEk~~W~~ai~~~i   99 (101)
T cd01219          74 KQRCLELQARTQKEKNDWVQAIFSII   99 (101)
T ss_pred             CCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence            99999966666666666666666554

FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01241 PH_Akt Akt pleckstrin homology (PH) domain

Probab=99.64  E-value=2.1e-15  Score=117.24  Aligned_cols=94  Identities=19%  Similarity=0.352  Sum_probs=68.3

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEE---EeccCCCCCCceeEEEEeec--Cce
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNV---VIAPSKIEHPHSLQLTFMKD--GST  131 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~---~~~~~~~~~~~~~~i~~~~~--~~~  131 (321)
                      .++|||.|+|+..+.|++|||||.. ++.|.||++ ....+.+.|+|.+..+   ........++++|.|.+...  ...
T Consensus         2 ~k~G~L~K~g~~~~~Wk~R~f~L~~-~~~l~~yk~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~F~i~~~~~~~~~~   80 (102)
T cd01241           2 VKEGWLHKRGEYIKTWRPRYFLLKS-DGSFIGYKEKPEDGDPFLPPLNNFSVAECQLMKTERPRPNTFIIRCLQWTTVIE   80 (102)
T ss_pred             cEEEEEEeecCCCCCCeeEEEEEeC-CCeEEEEecCCCccCccccccCCeEEeeeeeeeccCCCcceEEEEeccCCcccC
Confidence            5899999999999999999999983 678998888 4444457888877643   12122234567787753321  234


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      |+|  +|+|++++.+|+.+|+.+
T Consensus        81 r~f--~a~s~ee~~eWi~ai~~v  101 (102)
T cd01241          81 RTF--HVESPEEREEWIHAIQTV  101 (102)
T ss_pred             EEE--EeCCHHHHHHHHHHHHhh
Confidence            644  689999999999999854

Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain

Probab=99.64  E-value=1.6e-15  Score=120.71  Aligned_cols=93  Identities=26%  Similarity=0.438  Sum_probs=62.9

Q ss_pred             eEEEEEE-eCCCCCCCcceEEEEEeCCeeEeeeCCCC---CCcceeEEcccccCceEEecC--CCCCCCCCCceEEEEe-
Q psy9639         181 REGWLWK-TGPKNADAYRKRWFTLDYRKLMYHEEPLS---AYPKGEIFLGHCSDGYTVRLG--VPPGAKDQGFTFTLKT-  253 (321)
Q Consensus       181 k~G~L~K-~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~---~~~~g~i~L~~~~~~~~V~~~--~~~~~~~~~~~F~i~t-  253 (321)
                      -.|||.- +...+.+.|++|||+|+|+.|+||+.+.+   ..|.|.|+|..+    .+...  .+.....+++.|.|.. 
T Consensus         3 ~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~d~~~~~Plg~I~L~~c----~~~~v~~~~r~~c~Rp~tF~i~~~   78 (122)
T cd01263           3 YHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPDDEKRKGPTGLIDLSTC----TSSEGASAVRDICARPNTFHLDVW   78 (122)
T ss_pred             cceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCCccccCCceEEEEhhhC----cccccccCChhhcCCCCeEEEEEe
Confidence            4799984 54444589999999999999999998776   679999999764    23222  2333446788898853 


Q ss_pred             -CC-----------------eEE-EEEcCCHHHHHHHHHHHhh
Q psy9639         254 -PQ-----------------RWY-QFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       254 -~~-----------------r~~-~f~A~s~~e~~~Wv~aL~~  277 (321)
                       +.                 |+| +|+|+|.+|+++||.||++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~  121 (122)
T cd01263          79 RPKMETDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNS  121 (122)
T ss_pred             cccccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhc
Confidence             21                 333 4555555555555555554

Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>KOG0930|consensus

Probab=99.63  E-value=1.1e-15  Score=134.18  Aligned_cols=100  Identities=19%  Similarity=0.432  Sum_probs=81.1

Q ss_pred             cccccceeeEEEeecC-CCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEe----
Q psy9639          53 TYITGHMDGFLMKRGK-ESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFM----  126 (321)
Q Consensus        53 ~~~~~~~~G~L~K~g~-~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~----  126 (321)
                      .+.+..++|||.|.|+ ..++||||||+|.  +++|.||.- .|++|+|.|+|.+++. ...+...+|++|.+...    
T Consensus       256 tffnpdREGWLlKlgg~rvktWKrRWFiLt--dNCLYYFe~tTDKEPrGIIpLeNlsi-r~VedP~kP~cfEly~ps~~g  332 (395)
T KOG0930|consen  256 TFFNPDREGWLLKLGGNRVKTWKRRWFILT--DNCLYYFEYTTDKEPRGIIPLENLSI-REVEDPKKPNCFELYIPSNKG  332 (395)
T ss_pred             hccCccccceeeeecCCcccchhheeEEee--cceeeeeeeccCCCCCcceeccccce-eeccCCCCCCeEEEecCCCCc
Confidence            3446789999999998 5689999999999  999999999 9999999999999854 22234467888876221    


Q ss_pred             --------------ecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         127 --------------KDGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       127 --------------~~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                                    .+|..-.|.++|.+.+++++|+++|+++.
T Consensus       333 q~IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~i  375 (395)
T KOG0930|consen  333 QVIKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAI  375 (395)
T ss_pred             CeeeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHh
Confidence                          12445568899999999999999998764

>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain

Probab=99.63  E-value=2.4e-15  Score=115.45  Aligned_cols=87  Identities=9%  Similarity=0.188  Sum_probs=68.9

Q ss_pred             eEEEeecCC----CCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEec--cCCCCCCceeEEEEeecCceEEE
Q psy9639          61 GFLMKRGKE----SGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIA--PSKIEHPHSLQLTFMKDGSTRHI  134 (321)
Q Consensus        61 G~L~K~g~~----~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~--~~~~~~~~~~~i~~~~~~~~R~~  134 (321)
                      |.|.|+.+.    ..+||+|||+|.  ++.|.||++....|+|+|+|..+..+..  ....+.+++|+|..    +.|+|
T Consensus         5 ~~~~kr~~~~~~~~~n~KkRwF~Lt--~~~L~Y~k~~~~~~~g~I~L~~i~~ve~v~~~~~~~~~~fqivt----~~r~~   78 (98)
T cd01244           5 LQQVDRSRLAWKKVLHFKKRYFQLT--TTHLSWAKDVQCKKSALIKLAAIKGTEPLSDKSFVNVDIITIVC----EDDTM   78 (98)
T ss_pred             cEEEEcccCCCccCcCCceeEEEEC--CCEEEEECCCCCceeeeEEccceEEEEEcCCcccCCCceEEEEe----CCCeE
Confidence            445565422    368999999999  8999999995579999999999977642  22345567787753    45899


Q ss_pred             EEEeCChHHHHHHHHHHHh
Q psy9639         135 YVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~  153 (321)
                      |+.|+|++|+.+|+.+|+.
T Consensus        79 yi~a~s~~E~~~Wi~al~k   97 (98)
T cd01244          79 QLQFEAPVEATDWLNALEK   97 (98)
T ss_pred             EEECCCHHHHHHHHHHHhc
Confidence            9999999999999999974

RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>PF15409 PH_8: Pleckstrin homology domain

Probab=99.63  E-value=3.3e-15  Score=111.65  Aligned_cols=86  Identities=23%  Similarity=0.438  Sum_probs=71.9

Q ss_pred             EEEEEeCCCCCCCcceEEEEE--eCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEEE
Q psy9639         183 GWLWKTGPKNADAYRKRWFTL--DYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQF  260 (321)
Q Consensus       183 G~L~K~g~~~~~~WkkRwfvL--~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~f  260 (321)
                      |||.|+..+..++|++|||+|  ..+.|.||.++.+....|.|+|+..    .|+..      .+...|.|.+...+|+|
T Consensus         1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~~~~~rGsi~v~~a----~is~~------~~~~~I~idsg~~i~hL   70 (89)
T PF15409_consen    1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQNSGKLRGSIDVSLA----VISAN------KKSRRIDIDSGDEIWHL   70 (89)
T ss_pred             CcceeeccccCCCceeEEEEEEcCCcEEEEEecCCCCeeEeEEEccce----EEEec------CCCCEEEEEcCCeEEEE
Confidence            899998776669999999999  7999999999988889999999653    33321      23457999999999999


Q ss_pred             EcCCHHHHHHHHHHHhhc
Q psy9639         261 SALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       261 ~A~s~~e~~~Wv~aL~~a  278 (321)
                      .|.|+++.+.||.||+.|
T Consensus        71 Ka~s~~~f~~Wv~aL~~a   88 (89)
T PF15409_consen   71 KAKSQEDFQRWVSALQKA   88 (89)
T ss_pred             EcCCHHHHHHHHHHHHhc
Confidence            999999999999998865

>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain

Probab=99.59  E-value=2.1e-14  Score=110.63  Aligned_cols=93  Identities=18%  Similarity=0.243  Sum_probs=64.6

Q ss_pred             cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC---CcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639         179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA---YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ  255 (321)
Q Consensus       179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~---~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~  255 (321)
                      ++++|+|.|.+++.  .|+|+||.+.+..|++.....+.   .+.|.|+|.    ++.|++..  +....+|+|+|.++.
T Consensus         2 ~ikEG~L~K~~~k~--~~~R~~FLFnD~LlY~~~~~~~~~~y~~~~~i~L~----~~~V~~~~--~~~~~~~~F~I~~~~   73 (99)
T cd01220           2 FIRQGCLLKLSKKG--LQQRMFFLFSDLLLYTSKSPTDQNSFRILGHLPLR----GMLTEESE--HEWGVPHCFTIFGGQ   73 (99)
T ss_pred             eeeEEEEEEEeCCC--CceEEEEEccceEEEEEeecCCCceEEEEEEEEcC----ceEEeecc--CCcCCceeEEEEcCC
Confidence            58999999998754  56655555555445444444433   478999994    45676533  222457899999999


Q ss_pred             eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         256 RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       256 r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ++|.|+|+|++|+++||++|+.||
T Consensus        74 ks~~l~A~s~~Ek~~Wi~~i~~aI   97 (99)
T cd01220          74 CAITVAASTRAEKEKWLADLSKAI   97 (99)
T ss_pred             eEEEEECCCHHHHHHHHHHHHHHh
Confidence            999977777777777777777765

Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]

Probab=99.59  E-value=3.4e-14  Score=109.13  Aligned_cols=92  Identities=23%  Similarity=0.453  Sum_probs=78.0

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-C---CCCceeEEeccceEEEeccCC-----CCCCceeEEEEeec
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-E---KKEPKATLRISELNVVIAPSK-----IEHPHSLQLTFMKD  128 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~---~~~pkg~I~l~~~~~~~~~~~-----~~~~~~~~i~~~~~  128 (321)
                      .++|||.|++...+.|++|||||.  ++.|.||++ .   +..|.+.|+|.++.+...+..     ...+++|.|.+.  
T Consensus         2 ~~~G~L~~~~~~~~~wk~r~~vL~--~~~L~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~--   77 (104)
T PF00169_consen    2 IKEGWLLKKSSSRKKWKKRYFVLR--DSYLLYYKSSKDKSDSKPKGSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTP--   77 (104)
T ss_dssp             EEEEEEEEEESSSSSEEEEEEEEE--TTEEEEESSTTTTTESSESEEEEGTTEEEEEETSSTSTSTSSSSSEEEEEET--
T ss_pred             EEEEEEEEECCCCCCeEEEEEEEE--CCEEEEEecCccccceeeeEEEEecCceEEEcCccccccccCCCcEEEEEeC--
Confidence            579999999988899999999999  999999999 6   689999999999966544333     457788887642  


Q ss_pred             CceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         129 GSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       129 ~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                       ..+.++|+|+|++++..|+.+|+.+
T Consensus        78 -~~~~~~~~~~s~~~~~~W~~~i~~~  102 (104)
T PF00169_consen   78 -NGKSYLFSAESEEERKRWIQAIQKA  102 (104)
T ss_dssp             -TSEEEEEEESSHHHHHHHHHHHHHH
T ss_pred             -CCcEEEEEcCCHHHHHHHHHHHHHH
Confidence             2268999999999999999999865

The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....

>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain

Probab=99.56  E-value=2.1e-14  Score=110.14  Aligned_cols=82  Identities=18%  Similarity=0.270  Sum_probs=63.8

Q ss_pred             CCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC----eEEEEEcCCHHHHH
Q psy9639         194 DAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ----RWYQFSALSAPDRD  269 (321)
Q Consensus       194 ~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~----r~~~f~A~s~~e~~  269 (321)
                      ++||+|||+|+++.|+||++..+..+.|+|.|..  .||.|....  ....+.|+|.+.+|.    |+|+|.|+|++++.
T Consensus        18 K~~KrrwF~lk~~~L~YyK~kee~~~~p~i~lnl--~gcev~~dv--~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeqya   93 (106)
T cd01237          18 KGYKQYWFTFRDTSISYYKSKEDSNGAPIGQLNL--KGCEVTPDV--NVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQYA   93 (106)
T ss_pred             hhheeEEEEEeCCEEEEEccchhcCCCCeEEEec--CceEEcccc--cccccceEEEEecCCccCCeEEEEECCCHHHHH
Confidence            6899999999999999999988766777776654  577776533  222456999999886    99998887777777


Q ss_pred             HHHHHHhhcc
Q psy9639         270 QWIQAVQTGF  279 (321)
Q Consensus       270 ~Wv~aL~~ai  279 (321)
                      +||.|++.|.
T Consensus        94 ~Wmaa~rlas  103 (106)
T cd01237          94 KWMAACRLAS  103 (106)
T ss_pred             HHHHHHHHhh
Confidence            7777776653

Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain

Probab=99.55  E-value=6.9e-14  Score=104.27  Aligned_cols=101  Identities=20%  Similarity=0.275  Sum_probs=72.2

Q ss_pred             cceEEEEEEeCCCC-CCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-e
Q psy9639         179 FGREGWLWKTGPKN-ADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-R  256 (321)
Q Consensus       179 ~~k~G~L~K~g~~~-~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-r  256 (321)
                      +++.|||.-..... .++=|+|||||+..+|+||++..+.+++|.|+|    ++..++..+ .+...++|+|.|..|+ |
T Consensus         1 virkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~eeKE~kyilpL----dnLk~Rdve-~gf~sk~~~FeLfnpd~r   75 (110)
T cd01256           1 VIRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDEEKEKKYMLPL----DGLKLRDIE-GGFMSRNHKFALFYPDGR   75 (110)
T ss_pred             CeeeeeEEeeccceecCCCcceEEEEecceeeeecccccccccceeec----cccEEEeec-ccccCCCcEEEEEcCccc
Confidence            47899998765433 245899999999999999999999999999999    456676654 4445678999999763 3


Q ss_pred             EEEEEcCCHHHHHHHHHHHhhccccccccCceEEEEecCCHHHHHHHHHHHHH
Q psy9639         257 WYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT  309 (321)
Q Consensus       257 ~~~f~A~s~~e~~~Wv~aL~~ai~~~l~~~~~~~~l~a~s~~e~~~Wi~al~~  309 (321)
                      ..|                         ..|+...|+|+|.+|.+.|...+-.
T Consensus        76 nvy-------------------------kd~k~lel~~~~~e~vdswkasflr  103 (110)
T cd01256          76 NVY-------------------------KDYKQLELGCETLEEVDSWKASFLR  103 (110)
T ss_pred             ccc-------------------------cchheeeecCCCHHHHHHHHHHHHh
Confidence            222                         2344444666666666666655543

Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain

Probab=99.52  E-value=1.1e-13  Score=107.86  Aligned_cols=80  Identities=16%  Similarity=0.297  Sum_probs=58.9

Q ss_pred             CCCcceEEEEEeCCeeEeeeCCCCC--Ccce--eEEcccccCceEEecCCCCCCCCCCceEEEEeC-CeEEEEEcCCHHH
Q psy9639         193 ADAYRKRWFTLDYRKLMYHEEPLSA--YPKG--EIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP-QRWYQFSALSAPD  267 (321)
Q Consensus       193 ~~~WkkRwfvL~~~~L~Yyk~~~~~--~~~g--~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~-~r~~~f~A~s~~e  267 (321)
                      .+.|++|||+|+++.|+||+++...  ...+  .|++.    ++.|....  +...++++|.|.++ +++|+|+|+|+++
T Consensus        20 ~~~Wk~r~~vL~~~~L~~ykd~~~~~~~~~~~~~i~l~----~~~i~~~~--~~~k~~~~F~l~~~~~~~~~f~a~s~e~   93 (104)
T cd01253          20 NRSWDNVYGVLCGQSLSFYKDEKMAAENVHGEPPVDLT----GAQCEVAS--DYTKKKHVFRLRLPDGAEFLFQAPDEEE   93 (104)
T ss_pred             CCCcceEEEEEeCCEEEEEecCcccccCCCCCCcEecc----CCEEEecC--CcccCceEEEEEecCCCEEEEECCCHHH
Confidence            3689999999999999999988643  3344  44442    34443322  22246789999855 5999999999999


Q ss_pred             HHHHHHHHhhc
Q psy9639         268 RDQWIQAVQTG  278 (321)
Q Consensus       268 ~~~Wv~aL~~a  278 (321)
                      |.+||.||+.+
T Consensus        94 ~~~Wi~aL~~~  104 (104)
T cd01253          94 MSSWVRALKSA  104 (104)
T ss_pred             HHHHHHHHhcC
Confidence            99999999764

Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>KOG1117|consensus

Probab=99.52  E-value=1.2e-14  Score=143.40  Aligned_cols=219  Identities=20%  Similarity=0.278  Sum_probs=160.3

Q ss_pred             CccccccceeeEEEeecCCCC-CceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeec
Q psy9639          51 ALTYITGHMDGFLMKRGKESG-KYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKD  128 (321)
Q Consensus        51 ~~~~~~~~~~G~L~K~g~~~~-~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~  128 (321)
                      ..|.+...+.|||.|...... -+.+||.-+.  +..|.||.+ .+..++|.|++..++.+..   . .++.|+    ..
T Consensus        81 s~~isp~~~~gwldk~~pqg~~~~qkr~vkf~--~~s~~yf~~~k~py~k~~i~va~is~v~~---~-gd~kfe----vi  150 (1186)
T KOG1117|consen   81 STPISPVIKSGWLDKLSPQGEYPFQKRWVKFD--GSSLEYFLSPKDPYSKGPIPVAAISAVRN---F-GDNKFE----VI  150 (1186)
T ss_pred             CCccCchhhcchhhccCcCcccccCccceecC--CCCccccCCCCCCCCCCceeeehhhhhhh---c-cCceEE----EE
Confidence            335556789999999887654 5999999998  999999999 9999999999999866432   1 233343    34


Q ss_pred             CceEEEEEEeCChHHHHHHHHHHHhhhhhh-ccccCCCCChhhhhhhhCCCcceEEEEEEeCCCCCCCcceEEEEEeCCe
Q psy9639         129 GSTRHIYVYHEESQSIMNWYHAIRNAKFHR-LQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRK  207 (321)
Q Consensus       129 ~~~R~~~l~a~s~~e~~~W~~aLr~a~~~~-l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~  207 (321)
                      ++.|++.|.++++.+...|+..++++-... +..+.|          +..+..+.|||.-+|.+.     |-|.+|.++.
T Consensus       151 tn~r~fvfr~e~~~~r~~w~s~l~s~~~~Q~l~~ap~----------pp~pP~raG~lelrg~ka-----k~f~~vsp~~  215 (1186)
T KOG1117|consen  151 TNQRTFVFRQESEGERFIWVSPLQSALKEQRLRSAPP----------PPVPPPRAGWLELRGFKA-----KLFVAVSPER  215 (1186)
T ss_pred             ecceEEEEecCCcccceeeechhhhcchhhhhccCCC----------CCCCCCCccchhcccccc-----ceeEEecCce
Confidence            567999999999999999999988764322 222211          123467899999887665     5678899999


Q ss_pred             eEeeeCCCCCCcce--eEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhcccccccc
Q psy9639         208 LMYHEEPLSAYPKG--EIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKT  285 (321)
Q Consensus       208 L~Yyk~~~~~~~~g--~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~~~l~~  285 (321)
                      +..|++.++- +.|  .-++..  +++.|.+.       ....|.+.||.|.|.|.|+++.+++.|+.|++.+|..++++
T Consensus       216 vqL~knlq~f-~lgigit~I~m--~~~nvk~v-------dr~sfdl~Tp~r~fsftaese~erq~w~ea~q~siAeTlSd  285 (1186)
T KOG1117|consen  216 VQLYKNLQSF-PLGIGITFIYM--EVSNVKEV-------DRRSFDLNTPYREFSFTAESETERQIWGEAPQPSIAETLSD  285 (1186)
T ss_pred             eeeecccccc-cCCceeEEEec--cccccccc-------ccceeccCCceeeeeeeeccchhhhhhhhccCcccccccCh
Confidence            9999998773 433  222211  33444332       23679999999999999999999999999999999877776


Q ss_pred             C--------ceEEEEecCCHHHHHHHH
Q psy9639         286 P--------QRWYQFSALSAPDRDQWI  304 (321)
Q Consensus       286 ~--------~~~~~l~a~s~~e~~~Wi  304 (321)
                      .        ....+.||+...-+-+|.
T Consensus       286 ~evaeriW~ne~nr~cadC~ssrPdwa  312 (1186)
T KOG1117|consen  286 YEVAERIWLNEENRECADCGSSRPDWA  312 (1186)
T ss_pred             HHHHHHHHhccccccccccCCCCCccc
Confidence            4        223456666666666664

>smart00233 PH Pleckstrin homology domain

Probab=99.52  E-value=3.6e-13  Score=102.06  Aligned_cols=96  Identities=31%  Similarity=0.570  Sum_probs=73.9

Q ss_pred             ceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC---CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCe
Q psy9639         180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS---AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQR  256 (321)
Q Consensus       180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~---~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r  256 (321)
                      +++|||.+++......|++|||+|.++.|.||+++.+   ..+.+.|+|..    +.|............++|.|.++.+
T Consensus         2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~----~~v~~~~~~~~~~~~~~f~l~~~~~   77 (102)
T smart00233        2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKAKKDYKPKGSIDLSG----ITVREAPDPDSAKKPHCFEIKTADR   77 (102)
T ss_pred             ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCccccCCCceEEECCc----CEEEeCCCCccCCCceEEEEEecCC
Confidence            5799999988722368999999999999999998865   46789999965    3444332111123578999998877


Q ss_pred             -EEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         257 -WYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       257 -~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                       +|+|+|+|+++++.|+.+|+.++
T Consensus        78 ~~~~f~~~s~~~~~~W~~~i~~~~  101 (102)
T smart00233       78 RSYLLQAESEEEREEWVDALRKAI  101 (102)
T ss_pred             ceEEEEcCCHHHHHHHHHHHHHhh
Confidence             99988888888888888887754

Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.

>KOG1117|consensus

Probab=99.50  E-value=2.1e-13  Score=134.78  Aligned_cols=258  Identities=18%  Similarity=0.291  Sum_probs=165.6

Q ss_pred             cccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcccccCC--------------------------------
Q psy9639           3 QIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE--------------------------------   50 (321)
Q Consensus         3 ~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~--------------------------------   50 (321)
                      .+||.++|..|-.++|++- --.++.+-.-|.+||.+||....|-.+-                                
T Consensus       358 vlgn~~an~Fwa~nl~~~e-~lh~dssp~~r~~fi~~Kykeg~fRk~~~~~~~~sel~kalcaaV~~pdl~etma~l~sg  436 (1186)
T KOG1117|consen  358 VLGNPRANRFWAGNLPPNE-HLHPDSSPSTRRQFIKEKYKEGKFRKEHPVEICSSELPKALCAAVNVPDLLETMALLFSG  436 (1186)
T ss_pred             eecCcccccccccCCCCcc-ccCCCCCcchhhhHHHHHhhccccccccccccccccCChhheeeeeCCchhhHHHHhhcc
Confidence            4799999999999999863 2345666678899999999988886322                                


Q ss_pred             ------------Ccccccc-------------------------cee------------eEEEeecCCC----------C
Q psy9639          51 ------------ALTYITG-------------------------HMD------------GFLMKRGKES----------G   71 (321)
Q Consensus        51 ------------~~~~~~~-------------------------~~~------------G~L~K~g~~~----------~   71 (321)
                                  ..||+.+                         .++            |+|++.-...          .
T Consensus       437 a~v~~f~gd~~~~tp~~~a~~aGqslqmefl~~n~~s~~p~~ds~kel~~~~s~s~~~~~fLyc~~sa~~kl~~drr~~E  516 (1186)
T KOG1117|consen  437 ADVMCFTGDPVHSTPYLLAKKAGQSLQMEFLYHNKFSDFPQHDSHKELSQEYSQSTFLCGFLYCAPSAASKLSSDRRLRE  516 (1186)
T ss_pred             ccceeecCCCCCCCCcchhhccccchhheeeeccccccCCCccccchhhhhccccccccceeeechhhccCCCChhhhcc
Confidence                        0033322                         223            7777754433          2


Q ss_pred             CceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEe-ccCCCCCCceeEEEEee-cCceEEEEEEeCChHHHHHHH
Q psy9639          72 KYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVI-APSKIEHPHSLQLTFMK-DGSTRHIYVYHEESQSIMNWY  148 (321)
Q Consensus        72 ~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~-~~~~~~~~~~~~i~~~~-~~~~R~~~l~a~s~~e~~~W~  148 (321)
                      ...++||||.  ++.|.||.+ ....|.|.|.+.++.+.. .|.......||-+.|+. -.+.|.+.|.+++++++..|.
T Consensus       517 e~nr~wcVlg--~g~ls~fen~~S~tP~~lI~~~Eivclav~~pd~~pn~~~~f~fE~~l~~er~~~fgle~ad~l~~wt  594 (1186)
T KOG1117|consen  517 ETNRKWCVLG--GGFLSYFENEKSTTPNGLININEIVCLAVHPPDTYPNTGFIFIFEIYLPGERVFLFGLETADALRKWT  594 (1186)
T ss_pred             cCCCceEEcC--cchhhhhhhcCCCCCCceeeccceEEEeecCCCCCCCcCceeEEEEeecccceEEeecccHHHHHHHH
Confidence            3668999998  899999999 999999999999985543 34333344578777776 345699999999999999999


Q ss_pred             HHHHhhhhhhccccCCCCChhhhhhhhCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccc
Q psy9639         149 HAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHC  228 (321)
Q Consensus       149 ~aLr~a~~~~l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~  228 (321)
                      .+|...-       .|...    ...+..+...-|-|.-+.......|++-||.++|..|..--.... .+...+.|...
T Consensus       595 ~aiaKhf-------vp~~~----e~l~a~~~~llg~l~~kd~~~~~~~r~gwfsl~gssl~~~~~~~~-ve~d~~hlrrl  662 (1186)
T KOG1117|consen  595 EAIAKHF-------VPLFA----ENLLAADYDLLGRLFYKDCHALDQARKGWFSLDGSSLHFCLQMQP-VEEDRMHLRRL  662 (1186)
T ss_pred             HHHHHhc-------CchHH----HHhccchhhhhhhhhhcChhhhhhccccceecCCCeeEEecCCCc-CchhHHHHHHH
Confidence            9986431       12211    112334555667776665555578999999999999876433211 11111223222


Q ss_pred             cCceEEecCCCCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         229 SDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       229 ~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      .+ .++....  ....+.-.|.|+..+||.|++.++.-+..-|..||..|
T Consensus       663 qE-lsi~s~~--~n~~K~~~l~lve~grTLYI~g~~rldft~W~~AIeka  709 (1186)
T KOG1117|consen  663 QE-LSISSMV--QNGEKLDVLVLVEKGRTLYIQGETRLDFTVWHTAIEKA  709 (1186)
T ss_pred             HH-Hhhhhcc--CCcccccceEEEeeccEEEEecCCcchHHHHHHHHHHH
Confidence            12 1111111  11123446999999999994444444444444444443

>PF15409 PH_8: Pleckstrin homology domain

Probab=99.48  E-value=2.9e-13  Score=101.15  Aligned_cols=87  Identities=21%  Similarity=0.365  Sum_probs=68.6

Q ss_pred             eEEEee-cCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEEe
Q psy9639          61 GFLMKR-GKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYH  138 (321)
Q Consensus        61 G~L~K~-g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a  138 (321)
                      |||.|+ ....++|++|||||+...|.|.||.+ .+..+.|.|+|....+...+    ....    +.++++...+++.|
T Consensus         1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~~~~~rGsi~v~~a~is~~~----~~~~----I~idsg~~i~hLKa   72 (89)
T PF15409_consen    1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQNSGKLRGSIDVSLAVISANK----KSRR----IDIDSGDEIWHLKA   72 (89)
T ss_pred             CcceeeccccCCCceeEEEEEEcCCcEEEEEecCCCCeeEeEEEccceEEEecC----CCCE----EEEEcCCeEEEEEc
Confidence            788877 45568899999999434999999999 77789999999988443321    2222    34567789999999


Q ss_pred             CChHHHHHHHHHHHhhh
Q psy9639         139 EESQSIMNWYHAIRNAK  155 (321)
Q Consensus       139 ~s~~e~~~W~~aLr~a~  155 (321)
                      .|+++...|+++|+.++
T Consensus        73 ~s~~~f~~Wv~aL~~a~   89 (89)
T PF15409_consen   73 KSQEDFQRWVSALQKAK   89 (89)
T ss_pred             CCHHHHHHHHHHHHhcC
Confidence            99999999999998763

>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain

Probab=99.47  E-value=7.4e-13  Score=102.73  Aligned_cols=91  Identities=24%  Similarity=0.387  Sum_probs=73.5

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-C-----CCCceeEEeccceEEEeccCCCCCCceeEEEEeecCce
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-E-----KKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGST  131 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~-----~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~  131 (321)
                      .++|||.|.|+..+.|+.|||.|.  ++.|.|++. .     .-.+++.|+|.++.+. .+.....+|+|+|.    +..
T Consensus         3 ikeG~L~K~~~~~~~~k~RyffLF--nd~Ll~~~~~~~~~~~~y~~~~~i~l~~~~v~-~~~~~~~~~~F~I~----~~~   75 (101)
T cd01219           3 LKEGSVLKISSTTEKTEERYLFLF--NDLLLYCVPRKMIGGSKFKVRARIDVSGMQVC-EGDNLERPHSFLVS----GKQ   75 (101)
T ss_pred             ccceEEEEEecCCCCceeEEEEEe--CCEEEEEEcccccCCCcEEEEEEEecccEEEE-eCCCCCcCceEEEe----cCC
Confidence            579999999999999999999999  779999985 2     1256788999998553 33233467887763    566


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      |+++++|+|++|+.+|+.+|..+.
T Consensus        76 rsf~l~A~s~eEk~~W~~ai~~~i   99 (101)
T cd01219          76 RCLELQARTQKEKNDWVQAIFSII   99 (101)
T ss_pred             cEEEEEcCCHHHHHHHHHHHHHHh
Confidence            999999999999999999998763

FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain

Probab=99.44  E-value=8.3e-13  Score=105.11  Aligned_cols=93  Identities=19%  Similarity=0.386  Sum_probs=70.0

Q ss_pred             eeeEEEe-e-cCCCCCceeeEEEEeccCCeEEeecC-CC---CCceeEEeccceEEEec---c-CCCCCCceeEEEEeec
Q psy9639          59 MDGFLMK-R-GKESGKYHPRRFVLNEINDTIKYYVK-EK---KEPKATLRISELNVVIA---P-SKIEHPHSLQLTFMKD  128 (321)
Q Consensus        59 ~~G~L~K-~-g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~---~~pkg~I~l~~~~~~~~---~-~~~~~~~~~~i~~~~~  128 (321)
                      ..|||.- + .+..++|+||||||.  ++.|.||+. ++   ..|.|.|+|.++...-.   | +....+|.|.|.....
T Consensus         3 ~~GfL~~~q~~~~~k~W~RRWFvL~--g~~L~y~k~p~d~~~~~Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~   80 (122)
T cd01263           3 YHGFLTMFEDTSGFGAWHRRWCALE--GGEIKYWKYPDDEKRKGPTGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRP   80 (122)
T ss_pred             cceeEEEEeccCCCCCceEEEEEEe--CCEEEEEcCCCccccCCceEEEEhhhCcccccccCChhhcCCCCeEEEEEecc
Confidence            4799984 3 345689999999999  999999997 44   78999999999854321   1 2456888888864321


Q ss_pred             ---------------CceEE-EEEEeCChHHHHHHHHHHHh
Q psy9639         129 ---------------GSTRH-IYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       129 ---------------~~~R~-~~l~a~s~~e~~~W~~aLr~  153 (321)
                                     .-.|+ ++|.|||.+++.+|+.+|..
T Consensus        81 ~~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~  121 (122)
T cd01263          81 KMETDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNS  121 (122)
T ss_pred             cccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhc
Confidence                           11244 46889999999999999975

Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain

Probab=99.44  E-value=1.1e-12  Score=103.94  Aligned_cols=93  Identities=17%  Similarity=0.234  Sum_probs=67.2

Q ss_pred             eEEEEEEe------CCC---CCCCcceEEEEEeCCeeEeeeCCCC-------CCcceeEEcccccCceEEecCCCCCCCC
Q psy9639         181 REGWLWKT------GPK---NADAYRKRWFTLDYRKLMYHEEPLS-------AYPKGEIFLGHCSDGYTVRLGVPPGAKD  244 (321)
Q Consensus       181 k~G~L~K~------g~~---~~~~WkkRwfvL~~~~L~Yyk~~~~-------~~~~g~i~L~~~~~~~~V~~~~~~~~~~  244 (321)
                      |+|+|..+      |.+   +.+.|+++||||+|+.|+.|+++..       ......|.|..+    .+....  ....
T Consensus         2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a----~~~ia~--dy~K   75 (117)
T cd01230           2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHKPGKSLSETELKNAISIHHA----LATRAS--DYSK   75 (117)
T ss_pred             CCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCcccccccccccccceEEeccc----eeEeec--cccC
Confidence            57888643      111   2379999999999999999999854       234456777542    222221  2235


Q ss_pred             CCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         245 QGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       245 ~~~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +++.|.|.+++ +.|.|+|.+.+||+.||.+|+.++
T Consensus        76 r~~VF~L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~~  111 (117)
T cd01230          76 KPHVFRLRTADWREFLFQTSSLKELQSWIERINVVA  111 (117)
T ss_pred             CCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence            78999999975 999988888888888888888765

EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain

Probab=99.40  E-value=2.3e-12  Score=103.20  Aligned_cols=90  Identities=18%  Similarity=0.300  Sum_probs=68.9

Q ss_pred             eeeEEEeecCCC------C------------CceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEecc-------
Q psy9639          59 MDGFLMKRGKES------G------------KYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAP-------  112 (321)
Q Consensus        59 ~~G~L~K~g~~~------~------------~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~-------  112 (321)
                      ||||++|+++..      .            .|++|||||+  ++.|.||++ .+..|+|+|.|...-.+-..       
T Consensus         1 keG~i~kr~g~~~~~~~~~~~~~~~~~~~~~~w~kRWFvlr--~s~L~Y~~~~~~~~~~~vil~D~~f~v~~~~~~~~~~   78 (121)
T cd01254           1 KEGYIMKRSGGKRSGSDDCSFGCCCFCRMCDRWQKRWFIVK--ESFLAYMDDPSSAQILDVILFDVDFKVNGGGKEDISL   78 (121)
T ss_pred             CCceEEeCCCCCcCCcccccccccCCcccccCCcceeEEEe--CCEEEEEcCCCCCceeeEEEEcCCccEEeCCcccccc
Confidence            589999986541      1            6999999999  999999999 88999999999654222111       


Q ss_pred             -----CCCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         113 -----SKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       113 -----~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                           +..+..++|    .+.++.|+|.|.|+|+.++.+|+++|+.|
T Consensus        79 ~~~~~~~~~~~~~~----~i~t~~R~~~l~a~s~~~~~~Wi~~i~~a  121 (121)
T cd01254          79 AVELKDITGLRHGL----KITNSNRSLKLKCKSSRKLKQWMASIEDA  121 (121)
T ss_pred             cccccccCCCceEE----EEEcCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence                 112334444    44678899999999999999999999753

Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C

Probab=99.40  E-value=1.5e-12  Score=102.94  Aligned_cols=93  Identities=22%  Similarity=0.397  Sum_probs=52.3

Q ss_pred             eeeEEEeecCC-CCCceeeEEEEeccCCeEEeecC-CCC--------CceeEEeccceEEEeccC---------CCCCCc
Q psy9639          59 MDGFLMKRGKE-SGKYHPRRFVLNEINDTIKYYVK-EKK--------EPKATLRISELNVVIAPS---------KIEHPH  119 (321)
Q Consensus        59 ~~G~L~K~g~~-~~~wk~R~fvL~~~~~~L~Yy~~-~~~--------~pkg~I~l~~~~~~~~~~---------~~~~~~  119 (321)
                      ++|||.|.+.. .++|++|||+|.. ++.|.||+. .+.        .+..++...+........         ..+..+
T Consensus         1 k~G~l~K~~~~~~kgWk~RwFiL~k-~~~L~YyK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (112)
T PF15413_consen    1 KEGYLYKWGNKFGKGWKKRWFILRK-DGVLSYYKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKNPFGEIH   79 (112)
T ss_dssp             EEEEEEE--TTS-S--EEEEEEEE--TTEEEEESS-------------TT-SB-SEEEE---GGGT-EEEES-T--SS-S
T ss_pred             CCceEEEecCCCCcCccccEEEEEe-CCEEEEeecccccccccccccchhceEeecccCcccccccccccccCCcccCcC
Confidence            68999999998 8999999999986 899999998 221        122222222221111100         011111


Q ss_pred             eeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       120 ~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      ...  +.+.+++|+|+|++++.+|+.+|+++|+.|
T Consensus        80 ~~~--~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~  112 (112)
T PF15413_consen   80 LKV--FSIFTPTKTFHLRCETREDRYDWIEALQEA  112 (112)
T ss_dssp             SEE--EEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred             CCC--cEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence            111  234577899999999999999999999864

>cd00821 PH Pleckstrin homology (PH) domain

Probab=99.37  E-value=5.7e-12  Score=94.45  Aligned_cols=92  Identities=33%  Similarity=0.554  Sum_probs=71.6

Q ss_pred             eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC---CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-e
Q psy9639         181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS---AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-R  256 (321)
Q Consensus       181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~---~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-r  256 (321)
                      ++|||.++.......|++|||+|.++.|.+|+...+   ..+.+.|+|..    +.|....  ......++|.|.+.. +
T Consensus         1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~----~~v~~~~--~~~~~~~~f~i~~~~~~   74 (96)
T cd00821           1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSSKKSYKPKGSIPLSG----AEVEESP--DDSGRKNCFEIRTPDGR   74 (96)
T ss_pred             CcchhhhhhChhhCCccEEEEEEECCEEEEEECCCCCcCCCCcceEEcCC----CEEEECC--CcCCCCcEEEEecCCCc
Confidence            379998876542258999999999999999998876   67899999964    4454432  211357899999876 9


Q ss_pred             EEEEEcCCHHHHHHHHHHHhhc
Q psy9639         257 WYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       257 ~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      .|+|+|+|++++..|+.+|+.+
T Consensus        75 ~~~~~~~s~~~~~~W~~~l~~~   96 (96)
T cd00821          75 SYLLQAESEEEREEWIEALQSA   96 (96)
T ss_pred             EEEEEeCCHHHHHHHHHHHhcC
Confidence            9998888888888888888764

Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain

Probab=99.35  E-value=6.8e-12  Score=97.79  Aligned_cols=90  Identities=14%  Similarity=0.343  Sum_probs=65.8

Q ss_pred             eeeEEEee------cC--CCCCceeeEEEEeccCCeEEeecC-CCC--Ccee--EEeccceEEEeccCCCCCCceeEEEE
Q psy9639          59 MDGFLMKR------GK--ESGKYHPRRFVLNEINDTIKYYVK-EKK--EPKA--TLRISELNVVIAPSKIEHPHSLQLTF  125 (321)
Q Consensus        59 ~~G~L~K~------g~--~~~~wk~R~fvL~~~~~~L~Yy~~-~~~--~pkg--~I~l~~~~~~~~~~~~~~~~~~~i~~  125 (321)
                      ++|+|..+      |+  ..+.|++|||||.  ++.|.||++ ...  .+.+  .|+|.++.+.+.++...+++.|.|..
T Consensus         1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~--~~~L~~ykd~~~~~~~~~~~~~i~l~~~~i~~~~~~~k~~~~F~l~~   78 (104)
T cd01253           1 MEGSLERKHELESGGKKASNRSWDNVYGVLC--GQSLSFYKDEKMAAENVHGEPPVDLTGAQCEVASDYTKKKHVFRLRL   78 (104)
T ss_pred             CCceEeEEEEeecCCcccCCCCcceEEEEEe--CCEEEEEecCcccccCCCCCCcEeccCCEEEecCCcccCceEEEEEe
Confidence            46777732      21  3578999999999  999999998 432  3445  67776665555544445678888753


Q ss_pred             eecCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639         126 MKDGSTRHIYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       126 ~~~~~~R~~~l~a~s~~e~~~W~~aLr~  153 (321)
                         ...+.|+|+|+|.+++.+|+.+|+.
T Consensus        79 ---~~~~~~~f~a~s~e~~~~Wi~aL~~  103 (104)
T cd01253          79 ---PDGAEFLFQAPDEEEMSSWVRALKS  103 (104)
T ss_pred             ---cCCCEEEEECCCHHHHHHHHHHHhc
Confidence               2348899999999999999999975

Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain

Probab=99.33  E-value=7.1e-12  Score=96.25  Aligned_cols=83  Identities=14%  Similarity=0.301  Sum_probs=60.4

Q ss_pred             CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCC--CCCCceeEEEEeecCceEEEEEEeCChHHHHH
Q psy9639          70 SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSK--IEHPHSLQLTFMKDGSTRHIYVYHEESQSIMN  146 (321)
Q Consensus        70 ~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~--~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~  146 (321)
                      .++||+|||+|.  ++.|.||++ ++..+.|+|.|....+++.|+.  ....+++.+....+.+.|.|+|.++|++++.+
T Consensus        17 ~K~~KrrwF~lk--~~~L~YyK~kee~~~~p~i~lnl~gcev~~dv~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeqya~   94 (106)
T cd01237          17 LKGYKQYWFTFR--DTSISYYKSKEDSNGAPIGQLNLKGCEVTPDVNVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQYAK   94 (106)
T ss_pred             hhhheeEEEEEe--CCEEEEEccchhcCCCCeEEEecCceEEcccccccccceEEEEecCCccCCeEEEEECCCHHHHHH
Confidence            366999999999  999999999 6655666666665555555553  12234444422224456999999999999999


Q ss_pred             HHHHHHhh
Q psy9639         147 WYHAIRNA  154 (321)
Q Consensus       147 W~~aLr~a  154 (321)
                      ||.++|.|
T Consensus        95 Wmaa~rla  102 (106)
T cd01237          95 WMAACRLA  102 (106)
T ss_pred             HHHHHHHh
Confidence            99999865

Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd00900 PH-like Pleckstrin homology-like domain

Probab=99.31  E-value=5.4e-11  Score=89.69  Aligned_cols=91  Identities=27%  Similarity=0.462  Sum_probs=71.4

Q ss_pred             EEEEEEeCCCC---CCCcceEEEEEeCCeeEeeeCCCCCCcc-eeEEcccccCceEEecCCCCCCCCCCceEEEEeC---
Q psy9639         182 EGWLWKTGPKN---ADAYRKRWFTLDYRKLMYHEEPLSAYPK-GEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP---  254 (321)
Q Consensus       182 ~G~L~K~g~~~---~~~WkkRwfvL~~~~L~Yyk~~~~~~~~-g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~---  254 (321)
                      +|||.+++...   ...|++|||+|.++.|.||+.+.+..+. +.+++..+    .|....  ...+.+++|.|.+.   
T Consensus         2 ~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~~~~~~~~~~~l~~~----~v~~~~--~~~~~~~~F~i~~~~~~   75 (99)
T cd00900           2 EGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDDKKEIKPGSIPLSEI----SVEEDP--DGSDDPNCFAIVTKDRG   75 (99)
T ss_pred             ccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCCCCcCCCCEEEccce----EEEECC--CCCCCCceEEEECCCCC
Confidence            68999887663   2689999999999999999999877666 78888654    243322  11145789999987   


Q ss_pred             CeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         255 QRWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       255 ~r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      .+.++|+|+|+++++.|+.+|+++
T Consensus        76 ~~~~~~~~~~~~~~~~W~~al~~~   99 (99)
T cd00900          76 RRVFVFQADSEEEAQEWVEALQQA   99 (99)
T ss_pred             cEEEEEEcCCHHHHHHHHHHHhcC
Confidence            799998888888888888888764

Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.

>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain

Probab=99.30  E-value=2.1e-11  Score=91.12  Aligned_cols=92  Identities=23%  Similarity=0.386  Sum_probs=69.5

Q ss_pred             ceeeEEEeecCC--CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEE-eccCCCCCCceeEEEEeecC----
Q psy9639          58 HMDGFLMKRGKE--SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVV-IAPSKIEHPHSLQLTFMKDG----  129 (321)
Q Consensus        58 ~~~G~L~K~g~~--~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~-~~~~~~~~~~~~~i~~~~~~----  129 (321)
                      ++.|||.-....  .++-|+|||||.  +++|.||++ ++++|+++|+|.++..- +...-.+.+|+|.+ |..++    
T Consensus         2 irkgwl~~~n~~~m~ggsK~~WFVLt--~~~L~wykd~eeKE~kyilpLdnLk~Rdve~gf~sk~~~FeL-fnpd~rnvy   78 (110)
T cd01256           2 IRKGWLSISNVGIMKGGSKDYWFVLT--SESLSWYKDDEEKEKKYMLPLDGLKLRDIEGGFMSRNHKFAL-FYPDGRNVY   78 (110)
T ss_pred             eeeeeEEeeccceecCCCcceEEEEe--cceeeeecccccccccceeeccccEEEeecccccCCCcEEEE-EcCcccccc
Confidence            567998865533  356899999999  999999999 99999999999998542 22223567788887 44332    


Q ss_pred             -ceEEEEEEeCChHHHHHHHHHHH
Q psy9639         130 -STRHIYVYHEESQSIMNWYHAIR  152 (321)
Q Consensus       130 -~~R~~~l~a~s~~e~~~W~~aLr  152 (321)
                       ..+++-+.|++.++++.|-.++-
T Consensus        79 kd~k~lel~~~~~e~vdswkasfl  102 (110)
T cd01256          79 KDYKQLELGCETLEEVDSWKASFL  102 (110)
T ss_pred             cchheeeecCCCHHHHHHHHHHHH
Confidence             12445599999999999987653

Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>smart00233 PH Pleckstrin homology domain

Probab=99.28  E-value=8e-11  Score=88.99  Aligned_cols=91  Identities=27%  Similarity=0.510  Sum_probs=72.5

Q ss_pred             ceeeEEEeecC-CCCCceeeEEEEeccCCeEEeecC-CC---CCceeEEeccceEEEeccCCC--CCCceeEEEEeecCc
Q psy9639          58 HMDGFLMKRGK-ESGKYHPRRFVLNEINDTIKYYVK-EK---KEPKATLRISELNVVIAPSKI--EHPHSLQLTFMKDGS  130 (321)
Q Consensus        58 ~~~G~L~K~g~-~~~~wk~R~fvL~~~~~~L~Yy~~-~~---~~pkg~I~l~~~~~~~~~~~~--~~~~~~~i~~~~~~~  130 (321)
                      .++|||.+++. ....|++|||+|.  ++.|.||++ .+   ..+.+.|+|.++.+...+...  +.+++|.|..    .
T Consensus         2 ~~~G~l~~~~~~~~~~~~~~~~~L~--~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~f~l~~----~   75 (102)
T smart00233        2 IKEGWLYKKSGGKKKSWKKRYFVLF--NSTLLYYKSEKAKKDYKPKGSIDLSGITVREAPDPDSAKKPHCFEIKT----A   75 (102)
T ss_pred             ceeEEEEEeCCCccCCceEEEEEEE--CCEEEEEeCCCccccCCCceEEECCcCEEEeCCCCccCCCceEEEEEe----c
Confidence            47999999997 6688999999999  899999998 44   688999999999554433221  3556666542    2


Q ss_pred             e-EEEEEEeCChHHHHHHHHHHHhh
Q psy9639         131 T-RHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       131 ~-R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      + .+++|.++|++++.+|+.+|+.+
T Consensus        76 ~~~~~~f~~~s~~~~~~W~~~i~~~  100 (102)
T smart00233       76 DRRSYLLQAESEEEREEWVDALRKA  100 (102)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHHh
Confidence            3 48999999999999999999865

Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.

>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain

Probab=99.26  E-value=9.7e-11  Score=90.27  Aligned_cols=90  Identities=21%  Similarity=0.278  Sum_probs=67.1

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC--CCC---CceeEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK--EKK---EPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR  132 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~--~~~---~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R  132 (321)
                      .+||+|+|.++. +.|. |+|.|.  ++.|.|+..  .+.   .+.|.|+|.++.+.-.++..+.+|+|+|.    ++.+
T Consensus         3 ikEG~L~K~~~k-~~~~-R~~FLF--nD~LlY~~~~~~~~~~y~~~~~i~L~~~~V~~~~~~~~~~~~F~I~----~~~k   74 (99)
T cd01220           3 IRQGCLLKLSKK-GLQQ-RMFFLF--SDLLLYTSKSPTDQNSFRILGHLPLRGMLTEESEHEWGVPHCFTIF----GGQC   74 (99)
T ss_pred             eeEEEEEEEeCC-CCce-EEEEEc--cceEEEEEeecCCCceEEEEEEEEcCceEEeeccCCcCCceeEEEE----cCCe
Confidence            579999999875 3455 555555  577888765  333   58899999999643322223457888774    6779


Q ss_pred             EEEEEeCChHHHHHHHHHHHhhh
Q psy9639         133 HIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       133 ~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      .+.|+|.|++|+.+|+.+|..+.
T Consensus        75 s~~l~A~s~~Ek~~Wi~~i~~aI   97 (99)
T cd01220          75 AITVAASTRAEKEKWLADLSKAI   97 (99)
T ss_pred             EEEEECCCHHHHHHHHHHHHHHh
Confidence            99999999999999999998763

Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd00821 PH Pleckstrin homology (PH) domain

Probab=99.23  E-value=6.7e-11  Score=88.52  Aligned_cols=90  Identities=23%  Similarity=0.434  Sum_probs=72.8

Q ss_pred             eeeEEEeecCCC-CCceeeEEEEeccCCeEEeecC-CC---CCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEE
Q psy9639          59 MDGFLMKRGKES-GKYHPRRFVLNEINDTIKYYVK-EK---KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRH  133 (321)
Q Consensus        59 ~~G~L~K~g~~~-~~wk~R~fvL~~~~~~L~Yy~~-~~---~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~  133 (321)
                      ++|||.+++... ..|++|||+|.  ++.|.+|.. .+   ..|.+.|+|.+......+...+.+++|.|...   +++.
T Consensus         1 ~~G~l~~~~~~~~~~w~~~~~~L~--~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~f~i~~~---~~~~   75 (96)
T cd00821           1 KEGYLLKKTGKLRKGWKRRWFVLF--NDLLLYYKKKSSKKSYKPKGSIPLSGAEVEESPDDSGRKNCFEIRTP---DGRS   75 (96)
T ss_pred             CcchhhhhhChhhCCccEEEEEEE--CCEEEEEECCCCCcCCCCcceEEcCCCEEEECCCcCCCCcEEEEecC---CCcE
Confidence            479999988776 88999999999  899999988 54   79999999999765544433335778877532   2288


Q ss_pred             EEEEeCChHHHHHHHHHHHh
Q psy9639         134 IYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       134 ~~l~a~s~~e~~~W~~aLr~  153 (321)
                      ++|+++|++++.+|+.+|+.
T Consensus        76 ~~~~~~s~~~~~~W~~~l~~   95 (96)
T cd00821          76 YLLQAESEEEREEWIEALQS   95 (96)
T ss_pred             EEEEeCCHHHHHHHHHHHhc
Confidence            99999999999999999975

Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>KOG1090|consensus

Probab=99.20  E-value=4.8e-12  Score=126.78  Aligned_cols=100  Identities=34%  Similarity=0.520  Sum_probs=79.4

Q ss_pred             hCCCcceEEEEEEeCCCCCCCcceEEEEEe--CCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEE
Q psy9639         175 LTRDFGREGWLWKTGPKNADAYRKRWFTLD--YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLK  252 (321)
Q Consensus       175 ~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~--~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~  252 (321)
                      .+.+-+.+|+|+|+|... |.||.|||||+  ...|.||++..+..|+|.|+|.....   |....++.. +.+--|++.
T Consensus      1630 ~teNr~~eG~LyKrGA~l-K~Wk~RwFVLd~~khqlrYYd~~edt~pkG~IdLaeves---v~~~~~k~v-dekgffdlk 1704 (1732)
T KOG1090|consen 1630 PTENRIPEGYLYKRGAKL-KLWKPRWFVLDPDKHQLRYYDDFEDTKPKGCIDLAEVES---VALIGPKTV-DEKGFFDLK 1704 (1732)
T ss_pred             cccccCcccchhhcchhh-cccccceeEecCCccceeeecccccccccchhhhhhhhh---hcccCcccc-Cccceeeee
Confidence            345567799999999998 99999999998  67899999999999999999976532   333333333 334469999


Q ss_pred             eCCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         253 TPQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       253 t~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      |..|+|.|+|.+-..+++|++.|++|+
T Consensus      1705 tt~rvynf~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1705 TTNRVYNFCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred             hhhHHHHHHhccchHHHHHHHHHHHhh
Confidence            999999988888888888887777765

>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain

Probab=99.18  E-value=2.8e-10  Score=88.18  Aligned_cols=95  Identities=20%  Similarity=0.195  Sum_probs=67.0

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCC---CCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEP---LSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT  253 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~---~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t  253 (321)
                      +.++++|-|.|...   +.-+.|+|.|-++.|.|-+-.   ......+.|+|.    ++.|....  +....+++|.|.+
T Consensus         2 R~li~eG~L~K~~r---k~~~~R~ffLFnD~LvY~~~~~~~~~~~~~~~i~L~----~~~v~~~~--d~~~~~n~f~I~~   72 (104)
T cd01218           2 RVLVGEGVLTKMCR---KKPKQRQFFLFNDILVYGNIVISKKKYNKQHILPLE----GVQVESIE--DDGIERNGWIIKT   72 (104)
T ss_pred             CEEEecCcEEEeec---CCCceEEEEEecCEEEEEEeecCCceeeEeeEEEcc----ceEEEecC--CcccccceEEEec
Confidence            35689999999984   467889999999999996432   122346788984    45565432  2223578999999


Q ss_pred             CCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         254 PQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       254 ~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      +.++|.++|+|++|+.+||++|+.||.
T Consensus        73 ~~kSf~v~A~s~~eK~eWl~~i~~ai~   99 (104)
T cd01218          73 PTKSFAVYAATETEKREWMLHINKCVT   99 (104)
T ss_pred             CCeEEEEEcCCHHHHHHHHHHHHHHHH
Confidence            999999666666666666666666653

Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd00900 PH-like Pleckstrin homology-like domain

Probab=99.18  E-value=3.8e-10  Score=84.97  Aligned_cols=92  Identities=24%  Similarity=0.491  Sum_probs=72.7

Q ss_pred             eeeEEEeecCCC----CCceeeEEEEeccCCeEEeecC-CCCCce-eEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639          59 MDGFLMKRGKES----GKYHPRRFVLNEINDTIKYYVK-EKKEPK-ATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR  132 (321)
Q Consensus        59 ~~G~L~K~g~~~----~~wk~R~fvL~~~~~~L~Yy~~-~~~~pk-g~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R  132 (321)
                      .+|||.+++...    +.|++|||+|.  ++.|.||.. .+..+. +.+++..+.+...+...+.+++|+|... ++..+
T Consensus         1 ~~g~l~~~~~~~~~~~~~w~~~~~~l~--~~~l~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~F~i~~~-~~~~~   77 (99)
T cd00900           1 KEGYLLKLGSDDVSKGKRWKRRWFFLF--DDGLLLYKSDDKKEIKPGSIPLSEISVEEDPDGSDDPNCFAIVTK-DRGRR   77 (99)
T ss_pred             CccEEEEeCCCccccccCceeeEEEEE--CCEEEEEEcCCCCcCCCCEEEccceEEEECCCCCCCCceEEEECC-CCCcE
Confidence            379999999875    78999999999  899999999 666666 7999999873333322356788877532 11368


Q ss_pred             EEEEEeCChHHHHHHHHHHHh
Q psy9639         133 HIYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       133 ~~~l~a~s~~e~~~W~~aLr~  153 (321)
                      .++|++++.+++..|+.+|+.
T Consensus        78 ~~~~~~~~~~~~~~W~~al~~   98 (99)
T cd00900          78 VFVFQADSEEEAQEWVEALQQ   98 (99)
T ss_pred             EEEEEcCCHHHHHHHHHHHhc
Confidence            999999999999999999975

Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.

>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain

Probab=99.18  E-value=3.4e-10  Score=87.48  Aligned_cols=80  Identities=20%  Similarity=0.267  Sum_probs=64.8

Q ss_pred             ceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCC--CCCCCCceEEEEeCCeE
Q psy9639         180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP--GAKDQGFTFTLKTPQRW  257 (321)
Q Consensus       180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~--~~~~~~~~F~i~t~~r~  257 (321)
                      +++|||..-..+- +.|||+|++|+...|.+|+++.+..+-..|+|+.+   .+|+.+...  ..+...|||+|.|...+
T Consensus         1 lkEGWmVHyT~~d-~~rKRhYWrLDsK~Itlf~~e~~skyyKeIPLsEI---l~V~~~~~~~~~~~~~~hcFEi~T~~~v   76 (117)
T cd01239           1 LKEGWMVHYTSSD-NRRKKHYWRLDSKAITLYQEESGSRYYKEIPLAEI---LSVSSNNGDSVLAKHPPHCFEIRTTTNV   76 (117)
T ss_pred             CccceEEEEecCc-cceeeeEEEecCCeEEEEEcCCCCeeeEEeehHHh---eEEeccCCCcCCCCCCCcEEEEEecCEE
Confidence            4799998776666 78999999999999999999999999999999876   556543211  11346799999999999


Q ss_pred             EEEEcC
Q psy9639         258 YQFSAL  263 (321)
Q Consensus       258 ~~f~A~  263 (321)
                      |++.++
T Consensus        77 Y~VG~~   82 (117)
T cd01239          77 YFVGGE   82 (117)
T ss_pred             EEeccc
Confidence            998664

Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain

Probab=99.14  E-value=9.9e-11  Score=88.24  Aligned_cols=96  Identities=24%  Similarity=0.312  Sum_probs=69.7

Q ss_pred             ceEEEEEEeCCCCCCCcceEEEEEeCCeeE-----eeeCCCCCCcceeEEcccccCceEEecCCCCCC--------CCCC
Q psy9639         180 GREGWLWKTGPKNADAYRKRWFTLDYRKLM-----YHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGA--------KDQG  246 (321)
Q Consensus       180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~-----Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~--------~~~~  246 (321)
                      .++|||.|.|+...+.||||||+|.+-.-+     -|.. +.+.|.-.|.|    +||+|.-+++...        .+..
T Consensus         3 k~sGyL~k~Gg~~~KkWKKRwFvL~qvsQYtfamcsy~e-kks~P~e~~ql----dGyTvDy~~~~~~~~~~~~~~~gg~   77 (117)
T cd01234           3 KHCGYLYAIGKNVWKKWKKRFFVLVQVSQYTFAMCSYRE-KKAEPTEFIQL----DGYTVDYMPESDPDPNSELSLQGGR   77 (117)
T ss_pred             ceeEEEEeccchhhhhhheeEEEEEchhHHHHHHHhhhh-hcCCchhheee----cceEEeccCCCCCCcccccccccch
Confidence            489999999996669999999999965433     2333 33468888888    7899876654431        1234


Q ss_pred             ceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         247 FTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       247 ~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      +-|..+-.+.+..|+.+++.|+.-||+||-.|.+
T Consensus        78 ~ff~avkegd~~~fa~~de~~r~lwvqa~yratg  111 (117)
T cd01234          78 HFFNAVKEGDELKFATDDENERHLWVQAMYRATG  111 (117)
T ss_pred             hhhheeccCcEEEEeccchHHHHHHHHHHHHHcC
Confidence            6677777778888888888888888888877654

CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A

Probab=99.14  E-value=3.8e-10  Score=90.13  Aligned_cols=92  Identities=23%  Similarity=0.416  Sum_probs=57.1

Q ss_pred             eEEEEEEe------CCC---CCCCcceEEEEEeCCeeEeeeCCC--------------CCCcceeEEcccccCceEEecC
Q psy9639         181 REGWLWKT------GPK---NADAYRKRWFTLDYRKLMYHEEPL--------------SAYPKGEIFLGHCSDGYTVRLG  237 (321)
Q Consensus       181 k~G~L~K~------g~~---~~~~WkkRwfvL~~~~L~Yyk~~~--------------~~~~~g~i~L~~~~~~~~V~~~  237 (321)
                      |+|+|..+      |.+   ..++|+.-|+||+|..|++|++..              ...|.+.|.|..    +.+...
T Consensus         2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~----a~a~~a   77 (119)
T PF15410_consen    2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHH----ALAEIA   77 (119)
T ss_dssp             -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-----EEEEE
T ss_pred             ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCcccccCCcccccccccCcceeEEEecc----eEEEeC
Confidence            68999853      111   347899999999999999999831              123455688854    233322


Q ss_pred             CCCCCCCCCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         238 VPPGAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       238 ~~~~~~~~~~~F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                        .+-..++|+|.|.++ +..|.|+|.|+++|++||++|+-+
T Consensus        78 --~dY~Kr~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN~~  117 (119)
T PF15410_consen   78 --SDYTKRKNVFRLRTADGSEYLFQASDEEEMNEWIDAINYA  117 (119)
T ss_dssp             --TTBTTCSSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHHHH
T ss_pred             --cccccCCeEEEEEeCCCCEEEEECCCHHHHHHHHHHHhhh
Confidence              122347899999987 589998888888888888888764

>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain

Probab=99.14  E-value=6.7e-10  Score=88.02  Aligned_cols=92  Identities=16%  Similarity=0.221  Sum_probs=72.8

Q ss_pred             eeeEEEee------cCC----CCCceeeEEEEeccCCeEEeecC-CC-------CCceeEEeccceEEEeccCCCCCCce
Q psy9639          59 MDGFLMKR------GKE----SGKYHPRRFVLNEINDTIKYYVK-EK-------KEPKATLRISELNVVIAPSKIEHPHS  120 (321)
Q Consensus        59 ~~G~L~K~------g~~----~~~wk~R~fvL~~~~~~L~Yy~~-~~-------~~pkg~I~l~~~~~~~~~~~~~~~~~  120 (321)
                      ++|+|..+      |+.    ...|+++||||.  ++.|..|++ ..       ..+...|.|.++.+.++++...++|.
T Consensus         2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~--g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a~~~ia~dy~Kr~~V   79 (117)
T cd01230           2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILR--GLVLYLQKDEHKPGKSLSETELKNAISIHHALATRASDYSKKPHV   79 (117)
T ss_pred             CCcEEEEEEEecCCCccCCCCCCcceEEEEEEE--CCEEEEEccCcccccccccccccceEEeccceeEeeccccCCCcE
Confidence            67888753      222    357999999999  999999999 43       35568999999876777776778888


Q ss_pred             eEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         121 LQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       121 ~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      |.|. .  ...+.|.|+|.+.+|+..|+++|+.+.
T Consensus        80 F~L~-~--~~g~~~lfqA~~~ee~~~Wi~~I~~~~  111 (117)
T cd01230          80 FRLR-T--ADWREFLFQTSSLKELQSWIERINVVA  111 (117)
T ss_pred             EEEE-c--CCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence            8774 2  234889999999999999999998764

EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG1090|consensus

Probab=99.05  E-value=6.7e-11  Score=118.77  Aligned_cols=137  Identities=20%  Similarity=0.380  Sum_probs=95.8

Q ss_pred             HhhhccCCCCCCCCCCCCC--hHHHHHHHHHh--hhhcccccCCCccccccceeeEEEeecCCCCCceeeEEEEeccCCe
Q psy9639          11 LKYEMRVPASYKVPTSSCP--QVLLKEWIRSK--YEREEFRHPEALTYITGHMDGFLMKRGKESGKYHPRRFVLNEINDT   86 (321)
Q Consensus        11 ~~~e~~~p~~~~~p~~~~~--~~~~e~~ir~k--y~~~~f~~~~~~~~~~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~   86 (321)
                      ..|-|.=|++...|+.+..  ..--|+=.|.-  --.++|+.+.   -.+.+.+|+|.|||...+.|+.|||||..+...
T Consensus      1587 ~~~~a~~~~~i~ms~g~~~s~ts~a~~~arss~~tly~qf~s~~---teNr~~eG~LyKrGA~lK~Wk~RwFVLd~~khq 1663 (1732)
T KOG1090|consen 1587 HTWDAKPFEDIKMSSGAIQSGTSQAEKMARSSNNTLYRQFMSPP---TENRIPEGYLYKRGAKLKLWKPRWFVLDPDKHQ 1663 (1732)
T ss_pred             eccccCCccccccCccccccccchHHHhhcCCcchhhhhhcCCc---ccccCcccchhhcchhhcccccceeEecCCccc
Confidence            4566666667776643321  11112222221  1123555543   224566999999999999999999999988999


Q ss_pred             EEeecC-CCCCceeEEeccceEEEe--ccCCCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639          87 IKYYVK-EKKEPKATLRISELNVVI--APSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus        87 L~Yy~~-~~~~pkg~I~l~~~~~~~--~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      |+||.+ +|+.|+|.|+|.++..+-  .|...+. .||   |...+..|+|.|+|.+.....+|++.|.++
T Consensus      1664 lrYYd~~edt~pkG~IdLaevesv~~~~~k~vde-kgf---fdlktt~rvynf~a~nin~AqqWve~iqsc 1730 (1732)
T KOG1090|consen 1664 LRYYDDFEDTKPKGCIDLAEVESVALIGPKTVDE-KGF---FDLKTTNRVYNFCAQNINLAQQWVECIQSC 1730 (1732)
T ss_pred             eeeecccccccccchhhhhhhhhhcccCccccCc-cce---eeeehhhHHHHHHhccchHHHHHHHHHHHh
Confidence            999999 999999999999986542  2333332 343   444567799999999999999999999765

>KOG0690|consensus

Probab=99.00  E-value=3.4e-10  Score=102.73  Aligned_cols=93  Identities=28%  Similarity=0.434  Sum_probs=57.3

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEe-CCeeEeeeCC-CCCCcceeEEcccccCceEEecCCCCC-CCCCCceEEEEe
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLD-YRKLMYHEEP-LSAYPKGEIFLGHCSDGYTVRLGVPPG-AKDQGFTFTLKT  253 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~-~~~L~Yyk~~-~~~~~~g~i~L~~~~~~~~V~~~~~~~-~~~~~~~F~i~t  253 (321)
                      .+++++|||+|+|... ++|+.|||+|. ++.|.-|++. .+..+. .-+|    +.++|..|..-. .+.+++.|-|.+
T Consensus        13 ~~vvkEgWlhKrGE~I-knWRpRYF~l~~DG~~~Gyr~kP~~~~~~-p~pL----NnF~v~~cq~m~~erPrPntFiiRc   86 (516)
T KOG0690|consen   13 EDVVKEGWLHKRGEHI-KNWRPRYFLLFNDGTLLGYRSKPKEVQPT-PEPL----NNFMVRDCQTMKTERPRPNTFIIRC   86 (516)
T ss_pred             hhhHHhhhHhhcchhh-hcccceEEEEeeCCceEeeccCCccCCCC-cccc----cchhhhhhhhhhccCCCCceEEEEe
Confidence            4689999999999998 89999999996 6677766654 443222 2344    235555442111 234678888865


Q ss_pred             C------CeEEEEEcCCHHHHHHHHHHHhh
Q psy9639         254 P------QRWYQFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       254 ~------~r~~~f~A~s~~e~~~Wv~aL~~  277 (321)
                      -      +|||+  ++|++++++|+.||+.
T Consensus        87 LQWTTVIERTF~--ves~~eRq~W~~AIq~  114 (516)
T KOG0690|consen   87 LQWTTVIERTFY--VESAEERQEWIEAIQA  114 (516)
T ss_pred             eeeeeeeeeeee--cCCHHHHHHHHHHHHH
Confidence            3      47665  4444444444444444

>smart00105 ArfGap Putative GTP-ase activating proteins for the small GTPase, ARF

Probab=98.99  E-value=2.6e-10  Score=90.06  Aligned_cols=50  Identities=26%  Similarity=0.339  Sum_probs=45.4

Q ss_pred             CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639           1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE   50 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~   50 (321)
                      |...||..||++||+++|....+|...+....+|+|||+||++++|+.++
T Consensus        59 ~~~~GN~~~n~~~e~~~~~~~~~~~~~~~~~~~~~fI~~KY~~k~f~~~~  108 (112)
T smart00105       59 LQKGGNENANSIWESNLDDFSLKPPDSDDQQKYESFIAAKYEEKLFVPPE  108 (112)
T ss_pred             HHHhhhHHHHHHHHhhCCccccCCCCCchHHHHHHHHHHHHHhhhccccc
Confidence            56789999999999999998888877778899999999999999998864

Putative zinc fingers with GTPase activating proteins (GAPs) towards the small GTPase, Arf. The GAP of ARD1 stimulates GTPase hydrolysis for ARD1 but not ARFs.

>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A

Probab=98.97  E-value=3.3e-09  Score=82.04  Aligned_cols=87  Identities=24%  Similarity=0.325  Sum_probs=59.2

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCC-eeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYR-KLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ  255 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~-~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~  255 (321)
                      ..++++|++.|+.+..   .|+|+|+|+++ .|+|++.... ..+|.|+++..   ..|...       ..-.|.|.||+
T Consensus        11 e~Il~~g~v~K~kgl~---~kkR~liLTd~PrL~Yvdp~~~-~~KGeI~~~~~---l~v~~k-------~~~~F~I~tp~   76 (104)
T PF14593_consen   11 ELILKQGYVKKRKGLF---AKKRQLILTDGPRLFYVDPKKM-VLKGEIPWSKE---LSVEVK-------SFKTFFIHTPK   76 (104)
T ss_dssp             --EEEEEEEEEEETTE---EEEEEEEEETTTEEEEEETTTT-EEEEEE--STT----EEEEC-------SSSEEEEEETT
T ss_pred             CeEEEEEEEEEeeceE---EEEEEEEEccCCEEEEEECCCC-eECcEEecCCc---eEEEEc-------cCCEEEEECCC
Confidence            4679999999997654   89999999977 8888777655 67899999753   344331       22369999999


Q ss_pred             eEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         256 RWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       256 r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      |+|+|.. .+..+.+|+++|+..
T Consensus        77 RtY~l~d-~~~~A~~W~~~I~~~   98 (104)
T PF14593_consen   77 RTYYLED-PEGNAQQWVEAIEEV   98 (104)
T ss_dssp             EEEEEE--TTS-HHHHHHHHHHH
T ss_pred             cEEEEEC-CCCCHHHHHHHHHHH
Confidence            9999665 334455566666553

>KOG0248|consensus

Probab=98.95  E-value=9e-10  Score=107.28  Aligned_cols=206  Identities=17%  Similarity=0.224  Sum_probs=142.3

Q ss_pred             cccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC---CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCce
Q psy9639          55 ITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK---EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGST  131 (321)
Q Consensus        55 ~~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~---~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~  131 (321)
                      ..-.++|++.+.+...+.|+|||||++  .+.+.||..   .+.+|++.|++........   .+...-||    ....+
T Consensus       247 e~~ekSgy~~~~~s~~k~lkrr~~v~k--~gqi~~y~~~~~~~~~p~s~~d~~s~~~~~~---~~~s~~fq----li~~t  317 (936)
T KOG0248|consen  247 ETMEKSGYWTQLTSRIKSLKRRYVVFK--NGQISFYRKHNNRDEEPASKIDIRSVTKLEQ---QGAAYAFQ----LITST  317 (936)
T ss_pred             chhhcccchhcchHHHHHHHhHheeec--cceEEEEEcCCCccccccCcccccccceeec---cchhHHhh----hhhhc
Confidence            345789999999999999999999999  999999987   5689999998776543222   12222333    34556


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhhhhhccccCCCCChhhhhhhhCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEee
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYH  211 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~~~~l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yy  211 (321)
                      ..+++-+++.--..+|++.|..+... ++.. |.+.   +.  -.-+..-+|||.+.+...   =++-|+.|.+-+++||
T Consensus       318 ~~~~~~~~s~~lt~dw~~iL~~~iKv-~~~~-~~a~---~~--~p~~~~~~GwlT~vk~g~---skkv~~alv~~~~~~~  387 (936)
T KOG0248|consen  318 DKMNFMTESERTTHDWVTILSAAIKA-TTLR-EMAS---RV--TPIDASISGWLTRVKCGL---SKKVFAALVNQKLMFF  387 (936)
T ss_pred             eeEEEeccChhhhhhhHHHHHHHHHH-Hhcc-chhh---hc--CCCCCCcCcceeeecccc---ceeeeeeeeeeeeEEe
Confidence            78999999999999999998766432 1111 1110   00  011234589999887543   4788999999999999


Q ss_pred             eCCCCCCcceeEEcccccCceEEecCCCCC----CC----CCCceEEEEe--CCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         212 EEPLSAYPKGEIFLGHCSDGYTVRLGVPPG----AK----DQGFTFTLKT--PQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       212 k~~~~~~~~g~i~L~~~~~~~~V~~~~~~~----~~----~~~~~F~i~t--~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ++..+..|.|..++...-.+-.+..+..+.    .+    ...++.-|+.  .+-+++|--.+.++.+.|+.-|..|.
T Consensus       388 k~~~d~rp~g~l~~~~~h~~ee~~s~~sde~~e~~~~r~l~~~~~~l~~~~~~~~p~yLi~~t~e~k~~wly~l~~A~  465 (936)
T KOG0248|consen  388 KNSNDLVPNGFLCLQEKHNGTEEYSGSSDEQLETTKEHPQRKNNDSLCVQIANEDPVYLILRTSEDKEKWLYYLKSAS  465 (936)
T ss_pred             ecccccccccccchhhhhcceeeccCCchhhhhhhcCccccccCceEEeccCCCCCEEEEeeeccccceeeeeehhhc
Confidence            999999999998875432221111111000    11    1246666664  36788888889999999999888875

>KOG0705|consensus

Probab=98.94  E-value=3.5e-10  Score=108.38  Aligned_cols=49  Identities=29%  Similarity=0.518  Sum_probs=45.8

Q ss_pred             CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639           1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE   50 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~   50 (321)
                      |.++||..||++||.. -.++.||++++++++||.|||+|||.|.|.+|-
T Consensus       569 m~aiGN~~AN~vWE~~-~~G~~KPs~~s~REEkErwIr~KYeqklFLaPl  617 (749)
T KOG0705|consen  569 MSAIGNDLANSVWEGS-SQGQTKPSPDSSREEKERWIRAKYEQKLFLAPL  617 (749)
T ss_pred             HHHhhhhHHHHHhhhh-ccCCcCCCccccHHHHHHHHHHHHHHHhhcCCC
Confidence            7789999999999994 588999999999999999999999999999864

>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain

Probab=98.94  E-value=1e-08  Score=78.90  Aligned_cols=96  Identities=18%  Similarity=0.324  Sum_probs=66.6

Q ss_pred             eEEEEEEeCCCC---CCCcceEEEEEeCCeeEeeeCCCCC---CcceeEEcccccCceEEecCC-----CCCCCCCCceE
Q psy9639         181 REGWLWKTGPKN---ADAYRKRWFTLDYRKLMYHEEPLSA---YPKGEIFLGHCSDGYTVRLGV-----PPGAKDQGFTF  249 (321)
Q Consensus       181 k~G~L~K~g~~~---~~~WkkRwfvL~~~~L~Yyk~~~~~---~~~g~i~L~~~~~~~~V~~~~-----~~~~~~~~~~F  249 (321)
                      .+|||.-....+   .++|+++|+||.+..|++|..+.+.   .|..++++..   .++|+.+.     ..+..+-++-|
T Consensus         2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~~~~~~~p~~vldl~~---~fhv~~V~asDVi~a~~kDiP~IF   78 (112)
T cd01242           2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQDKENSTPSMILDIDK---LFHVRPVTQGDVYRADAKEIPKIF   78 (112)
T ss_pred             cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCccccCCCcEEEEEccc---eeeeecccHHHeeecCcccCCeEE
Confidence            489997543322   2589999999999999999987653   3667777754   24444321     11123457889


Q ss_pred             EEEeCC--eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         250 TLKTPQ--RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       250 ~i~t~~--r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +|..++  ++.+|-|+|+.|.+.||.+|..-|
T Consensus        79 ~I~~~~~~~~lllLA~s~~ek~kWV~~L~~~~  110 (112)
T cd01242          79 QILYANEARDLLLLAPQTDEQNKWVSRLVKKI  110 (112)
T ss_pred             EEEeCCccceEEEEeCCchHHHHHHHHHHHhc
Confidence            998754  899988888888888887776543

Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain

Probab=98.87  E-value=4.5e-08  Score=76.51  Aligned_cols=95  Identities=14%  Similarity=0.158  Sum_probs=61.7

Q ss_pred             ceEEEEEE--eCCCCCCCcceEEEEEeCCeeEeeeCCCCC--C----cceeEEcccccCceEEecCC-----CCCCCCCC
Q psy9639         180 GREGWLWK--TGPKNADAYRKRWFTLDYRKLMYHEEPLSA--Y----PKGEIFLGHCSDGYTVRLGV-----PPGAKDQG  246 (321)
Q Consensus       180 ~k~G~L~K--~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~--~----~~g~i~L~~~~~~~~V~~~~-----~~~~~~~~  246 (321)
                      ..+|||.-  .++.. ++|+++|++|.+..|++|..+.+.  .    +.-.|++..  ..++|+.+.     ..+..+-+
T Consensus         3 ~~EGwvkvP~~~~~k-rGW~r~~vVv~~~Kl~lYd~e~~k~~~p~~~~~~vLdlrD--~~fsV~~VtasDvi~a~~kDiP   79 (122)
T cd01243           3 AYEGHVKIPKPGGVK-KGWQRALVVVCDFKLFLYDIAEDRASQPSVVISQVLDMRD--PEFSVSSVLESDVIHASKKDIP   79 (122)
T ss_pred             cceeeEeccCCCCcc-cCceEEEEEEeCCEEEEEeCCccccCCccCceeEEEEcCC--CCEEEEEecHHHccccCcccCC
Confidence            35899974  33334 799999999999999999977653  2    233455532  235555422     11223457


Q ss_pred             ceEEEEeC-------CeEEEEEcCCHHHHHHHHHHHhh
Q psy9639         247 FTFTLKTP-------QRWYQFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       247 ~~F~i~t~-------~r~~~f~A~s~~e~~~Wv~aL~~  277 (321)
                      +-|+|.+.       ..+.+|-|+|+.|+++||.||..
T Consensus        80 ~If~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~  117 (122)
T cd01243          80 CIFRVTTSQISASSSKCSTLMLADTEEEKSKWVGALSE  117 (122)
T ss_pred             eEEEEEEecccCCCCccEEEEEeCCchHHHHHHHHHHH
Confidence            88998763       37777777777777777776653

MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain

Probab=98.87  E-value=3.3e-08  Score=77.58  Aligned_cols=94  Identities=20%  Similarity=0.272  Sum_probs=62.7

Q ss_pred             CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC-----------CCcceeEEcccccCceEEecCCCCCCCCCC
Q psy9639         178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS-----------AYPKGEIFLGHCSDGYTVRLGVPPGAKDQG  246 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~-----------~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~  246 (321)
                      .++++|-|.|-+... +..+.|+|.|-++.|.|-+....           ...++.++|..    +.|... + +...-+
T Consensus         3 elI~EG~L~ki~~~~-~~~q~R~~FLFd~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~----~~V~d~-~-d~~~~k   75 (112)
T cd01261           3 EFIMEGTLTRVGPSK-KAKHERHVFLFDGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRK----VDINDK-P-DSSEYK   75 (112)
T ss_pred             cccccCcEEEEeccc-CCcceEEEEEecCeEEEEEeccCcccccccccceEEEEEEEeeee----eEEEEc-C-CCcccC
Confidence            468899999998766 68999999999999999885432           12345577743    444432 2 222347


Q ss_pred             ceEEEEeC-CeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         247 FTFTLKTP-QRWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       247 ~~F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      +.|.|.+. ++.|.|+|.|+++.++||++|..+
T Consensus        76 naF~I~~~~~~s~~l~Akt~eeK~~Wm~~l~~~  108 (112)
T cd01261          76 NAFEIILKDGNSVIFSAKNAEEKNNWMAALISV  108 (112)
T ss_pred             ceEEEEcCCCCEEEEEECCHHHHHHHHHHHHHH
Confidence            89999984 788995555555555555544443

Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain

Probab=98.82  E-value=9.9e-09  Score=77.52  Aligned_cols=94  Identities=23%  Similarity=0.357  Sum_probs=62.4

Q ss_pred             ceeeEEEeecC-CCCCceeeEEEEeccCCeEEe------ecCCCCCceeEEeccceEEEeccCCCCCCc-ee-----EEE
Q psy9639          58 HMDGFLMKRGK-ESGKYHPRRFVLNEINDTIKY------YVKEKKEPKATLRISELNVVIAPSKIEHPH-SL-----QLT  124 (321)
Q Consensus        58 ~~~G~L~K~g~-~~~~wk~R~fvL~~~~~~L~Y------y~~~~~~pkg~I~l~~~~~~~~~~~~~~~~-~~-----~i~  124 (321)
                      .++|||+|.|+ ..+.||||||||.  + .-.|      |.....+|...|.|.+.++-.-+...++|+ |+     .+.
T Consensus         3 k~sGyL~k~Gg~~~KkWKKRwFvL~--q-vsQYtfamcsy~ekks~P~e~~qldGyTvDy~~~~~~~~~~~~~~~gg~~f   79 (117)
T cd01234           3 KHCGYLYAIGKNVWKKWKKRFFVLV--Q-VSQYTFAMCSYREKKAEPTEFIQLDGYTVDYMPESDPDPNSELSLQGGRHF   79 (117)
T ss_pred             ceeEEEEeccchhhhhhheeEEEEE--c-hhHHHHHHHhhhhhcCCchhheeecceEEeccCCCCCCcccccccccchhh
Confidence            47999999999 6799999999997  2 2222      222567899999999986543222222222 11     111


Q ss_pred             EeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         125 FMKDGSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       125 ~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      |......-.+.|.++++.|+.-|++++-.|
T Consensus        80 f~avkegd~~~fa~~de~~r~lwvqa~yra  109 (117)
T cd01234          80 FNAVKEGDELKFATDDENERHLWVQAMYRA  109 (117)
T ss_pred             hheeccCcEEEEeccchHHHHHHHHHHHHH
Confidence            221112256889999999999999998654

CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain

Probab=98.82  E-value=3.2e-08  Score=75.88  Aligned_cols=89  Identities=20%  Similarity=0.401  Sum_probs=54.3

Q ss_pred             eEEEEEEeCCCCC-CCcceEEEEEeC-CeeE----eeeC-CCCC--Ccc--eeEEcccccCceEEecCCCCCCCCCCceE
Q psy9639         181 REGWLWKTGPKNA-DAYRKRWFTLDY-RKLM----YHEE-PLSA--YPK--GEIFLGHCSDGYTVRLGVPPGAKDQGFTF  249 (321)
Q Consensus       181 k~G~L~K~g~~~~-~~WkkRwfvL~~-~~L~----Yyk~-~~~~--~~~--g~i~L~~~~~~~~V~~~~~~~~~~~~~~F  249 (321)
                      ++|||+.+..+.. -.|.+.||.... +.++    +... ..+.  ...  -.|.|.+    |++...   ...+++|||
T Consensus         1 k~GYLy~~~k~~~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v~~~e~~~l~s----c~~r~~---~~~dRRFCF   73 (104)
T cd01249           1 KEGYLYMQEKSKFGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAVAQDETLTLKS----CSRRKT---ESIDKRFCF   73 (104)
T ss_pred             CCceEEEEcCCCCCCeEEEEEEEEEcCCcEEEEEecccccccccCcccccceEEeeee----cccccc---CCccceeeE
Confidence            5899998765442 379999998874 3332    2221 1110  011  1233322    445443   223688999


Q ss_pred             EEEeCCe--EEEEEcCCHHHHHHHHHHHh
Q psy9639         250 TLKTPQR--WYQFSALSAPDRDQWIQAVQ  276 (321)
Q Consensus       250 ~i~t~~r--~~~f~A~s~~e~~~Wv~aL~  276 (321)
                      +|.++.+  ++.|+|+|+.++..||.|+.
T Consensus        74 ei~~~~~~~~~~lQA~Se~~~~~Wi~A~d  102 (104)
T cd01249          74 DVEVEEKPGVITMQALSEKDRRLWIEAMD  102 (104)
T ss_pred             eeeecCCCCeEEEEecCHHHHHHHHHhhc
Confidence            9998876  89988888888888877764

Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain

Probab=98.81  E-value=2e-08  Score=77.35  Aligned_cols=94  Identities=19%  Similarity=0.252  Sum_probs=56.2

Q ss_pred             eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcce---eEEcccccCceEEecCCCCCCCCCCceEEEEeCC--
Q psy9639         181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKG---EIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ--  255 (321)
Q Consensus       181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g---~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~--  255 (321)
                      .+|+|+-+.... ++||||||+|+..-|+|.-......++.   ...+... ++|......-.-....+|+|-|..+.  
T Consensus         2 ~~g~LylK~~gk-KsWKk~~f~LR~SGLYy~~Kgksk~srdL~cl~~f~~~-nvY~~~~~kKk~kAPTd~~F~~K~~~~q   79 (114)
T cd01259           2 MEGPLYLKADGK-KSWKKYYFVLRSSGLYYFPKEKTKNTRDLACLNLLHGH-NVYTGLGWRKKYKSPTDYCFGFKAVGDQ   79 (114)
T ss_pred             ccceEEEccCCC-ccceEEEEEEeCCeeEEccCCCcCCHHHHHHHHhcccC-cEEEEechhhccCCCCCceEEEeccccC
Confidence            479999887665 7999999999999999987766655542   2233222 34544321111111246888887542  


Q ss_pred             -----eEEEEEcCCHHHHHHHHHHHh
Q psy9639         256 -----RWYQFSALSAPDRDQWIQAVQ  276 (321)
Q Consensus       256 -----r~~~f~A~s~~e~~~Wv~aL~  276 (321)
                           -.-+|+|++++.++.||.||+
T Consensus        80 ~~~s~~ik~lCaeDe~t~~~W~ta~R  105 (114)
T cd01259          80 SKGSQSIKYLCAEDLPTLDRWLTAIR  105 (114)
T ss_pred             cccchhheeeccCCHHHHHHHHHHHH
Confidence                 234555555555555555554

Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain

Probab=98.78  E-value=2.8e-08  Score=76.60  Aligned_cols=96  Identities=22%  Similarity=0.380  Sum_probs=65.2

Q ss_pred             eeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCcee---EEeccceEE--Eec-cCCCCC--CceeEEEEee-c
Q psy9639          59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKA---TLRISELNV--VIA-PSKIEH--PHSLQLTFMK-D  128 (321)
Q Consensus        59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg---~I~l~~~~~--~~~-~~~~~~--~~~~~i~~~~-~  128 (321)
                      .+|+|+-+....+.||||||+|+  ...|.|..+ +.++|+.   ...+.+.++  .+. -.+.+.  ++||.|--.. .
T Consensus         2 ~~g~LylK~~gkKsWKk~~f~LR--~SGLYy~~Kgksk~srdL~cl~~f~~~nvY~~~~~kKk~kAPTd~~F~~K~~~~q   79 (114)
T cd01259           2 MEGPLYLKADGKKSWKKYYFVLR--SSGLYYFPKEKTKNTRDLACLNLLHGHNVYTGLGWRKKYKSPTDYCFGFKAVGDQ   79 (114)
T ss_pred             ccceEEEccCCCccceEEEEEEe--CCeeEEccCCCcCCHHHHHHHHhcccCcEEEEechhhccCCCCCceEEEeccccC
Confidence            58999988877799999999999  889988887 6677764   344444432  111 112233  4454442121 1


Q ss_pred             C-ceEEE-EEEeCChHHHHHHHHHHHhhhh
Q psy9639         129 G-STRHI-YVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       129 ~-~~R~~-~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      + ..|.+ +|+|+|++.+..|+.+||-++.
T Consensus        80 ~~~s~~ik~lCaeDe~t~~~W~ta~Ri~Ky  109 (114)
T cd01259          80 SKGSQSIKYLCAEDLPTLDRWLTAIRIAKY  109 (114)
T ss_pred             cccchhheeeccCCHHHHHHHHHHHHHHhh
Confidence            2 13554 8999999999999999998765

Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG3531|consensus

Probab=98.75  E-value=5.1e-09  Score=104.17  Aligned_cols=209  Identities=21%  Similarity=0.346  Sum_probs=143.9

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecCC-CC----CceeEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKE-KK----EPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR  132 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~~-~~----~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R  132 (321)
                      +.+|-|.|-.+  ++-++|-|.|.  .+.|.|-.+. +.    ...|-|++. +.+.=+...-+-||+|.|    .+...
T Consensus       751 ir~g~llK~sk--kgLqqrmfFLf--sdillytsk~~~~~~~fri~g~lP~~-l~~en~en~~s~p~~~ti----~~~qk  821 (1036)
T KOG3531|consen  751 IRSGCLLKLSK--KGLQQRMFFLF--SDILLYTSKGPDVQKCFRINGDLPLT-LTMENSENEWSVPHCFTI----SGAQK  821 (1036)
T ss_pred             hhcCCchhhcc--ccchhhhhhhh--hhhheeccCCCChhheeEeccCCceE-eeeecccccccCCceEEE----eccce
Confidence            56788888764  45788888887  6677666552 21    234666666 322112223455677654    46678


Q ss_pred             EEEEEeCChHHHHHHHHHHHhhhhhhcc--------------ccCCCCChhhhh------------h-hh--------C-
Q psy9639         133 HIYVYHEESQSIMNWYHAIRNAKFHRLQ--------------VAFPSANDSELV------------K-LL--------T-  176 (321)
Q Consensus       133 ~~~l~a~s~~e~~~W~~aLr~a~~~~l~--------------~~~p~~~~~~l~------------~-~~--------~-  176 (321)
                      .+++.|.+-.+...|...++.+..-..+              ...|..++++.+            . .+        + 
T Consensus       822 ~i~vsast~~~sk~~~~~r~~~i~~~~k~~~~~pg~~~~~l~t~~p~sp~~~sle~~~~~~d~s~~rt~~~rt~p~R~nt  901 (1036)
T KOG3531|consen  822 QIYVSASTRRESKKWEFDRRKAIDLAPKKSSPAPGLFSAQLHTIPPTSPDEDSLEYQESEDDLSVIRTSLERTDPHRQNT  901 (1036)
T ss_pred             EEEEeccchhhhhhhhhccchhhhhccccCCCCCCccccccccCCCCCCchhhhcccchhhhHHHHHHhhcccCcccCCc
Confidence            8999999999999999766655432111              111212221110            0 00        0 


Q ss_pred             --------------------CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEec
Q psy9639         177 --------------------RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRL  236 (321)
Q Consensus       177 --------------------~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~  236 (321)
                                          -.-...|||..+-... .+|+|-|.|...-+|++||+.+|..+..+++|    .||+|..
T Consensus       902 ~vhvcw~r~~sv~~~d~s~a~e~qLsg~Llrkfkns-sgwqkLwvvft~fcl~fyKS~qD~~~laslPl----Lgysvs~  976 (1036)
T KOG3531|consen  902 PVHVCWHRNTSVSTADHSIAVENQLSGYLLRKFKNS-SGWQKLWVVFTNFCLFFYKSHQDSEPLASLPL----LGYSVSI  976 (1036)
T ss_pred             ceEEeecCCCccccCCcchHHHhhhhHHHHHHhhcc-ccceeeeeeecceeeEeecccccccccccccc----cccccCC
Confidence                                0014578887665444 59999999999999999999999999999998    6788877


Q ss_pred             CCCCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         237 GVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       237 ~~~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      ..+.....+.+.|.+...+.+|+|+|++.-.-++|++.|+.+-.
T Consensus       977 P~~~d~i~K~~vfkl~fk~hvyffraes~yt~~rw~evi~~a~~ 1020 (1036)
T KOG3531|consen  977 PAEPDPIQKDYVFKLKFKSHVYFFRAESYYTFERWMEVITDAPS 1020 (1036)
T ss_pred             CCCCCCcchhheeeeehhhhHHHHhhhhhhhhhhHHHHhhcCCc
Confidence            54444445779999999999999999999999999999988753

>PF01412 ArfGap: Putative GTPase activating protein for Arf; InterPro: IPR001164 This entry describes a family of small GTPase activating proteins, for example ARF1-directed GTPase-activating protein, the cycle control GTPase activating protein (GAP) GCS1 which is important for the regulation of the ADP ribosylation factor ARF, a member of the Ras superfamily of GTP-binding proteins []

Probab=98.74  E-value=3.8e-09  Score=83.94  Aligned_cols=47  Identities=28%  Similarity=0.395  Sum_probs=41.9

Q ss_pred             CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhccccc
Q psy9639           1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRH   48 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~   48 (321)
                      |.+.||..||++||++ +....+|.+++....+++|||+||+.+.|+.
T Consensus        69 ~~~~GN~~~n~~~e~~-~~~~~~~~~~~~~~~~~~fI~~KY~~k~f~~  115 (116)
T PF01412_consen   69 MREGGNKRANSIWEAN-SPPPKKPPPSSDQEKREQFIRAKYVEKAFIS  115 (116)
T ss_dssp             HHHSHHHHHHHHHTTT-STTTTTHCTTSHHHHHHHHHHHHHTTHTTS-
T ss_pred             HHHHChHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHHHHHHHhhhhcc
Confidence            5678999999999999 5567888899999999999999999999975

The GTP-bound form of ARF is essential for the maintenance of normal Golgi morphology, it participates in recruitment of coat proteins which are required for budding and fission of membranes. Before the fusion with an acceptor compartment the membrane must be uncoated. This step required the hydrolysis of GTP associated to ARF. These proteins contain a characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) which displays some similarity to the C4-type GATA zinc finger. The ARFGAP domain display no obvious similarity to other GAP proteins. The 3D structure of the ARFGAP domain of the PYK2-associated protein beta has been solved []. It consists of a three-stranded beta-sheet surrounded by 5 alpha helices. The domain is organised around a central zinc atom which is coordinated by 4 cysteines. The ARFGAP domain is clearly unrelated to the other GAP proteins structures which are exclusively helical. Classical GAP proteins accelerate GTPase activity by supplying an arginine finger to the active site. The crystal structure of ARFGAP bound to ARF revealed that the ARFGAP domain does not supply an arginine to the active site which suggests a more indirect role of the ARFGAP domain in the GTPase hydrolysis []. The Rev protein of human immunodeficiency virus type 1 (HIV-1) facilitates nuclear export of unspliced and partly-spliced viral RNAs []. Rev contains an RNA-binding domain and an effector domain; the latter is believed to interact with a cellular cofactor required for the Rev response and hence HIV-1 replication. Human Rev interacting protein (hRIP) specifically interacts with the Rev effector. The amino acid sequence of hRIP is characterised by an N-terminal, C-4 class zinc finger motif.; GO: 0008060 ARF GTPase activator activity, 0008270 zinc ion binding, 0032312 regulation of ARF GTPase activity; PDB: 2P57_A 2CRR_A 2OWA_B 3O47_B 3DWD_A 1DCQ_A 2CRW_A 3MDB_D 3FEH_A 3LJU_X ....

>KOG2059|consensus

Probab=98.71  E-value=2e-08  Score=98.61  Aligned_cols=96  Identities=20%  Similarity=0.262  Sum_probs=75.3

Q ss_pred             cceEEEEEEeCC----CCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC
Q psy9639         179 FGREGWLWKTGP----KNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP  254 (321)
Q Consensus       179 ~~k~G~L~K~g~----~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~  254 (321)
                      +.++|.|.|+..    .+++.+|||||.|++..|.|.|++.. .|.+.|+|.++   ..|+..+..+. +.+|+|+|++.
T Consensus       565 v~k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~~-q~~~~Ipl~nI---~avEklee~sF-~~knv~qVV~~  639 (800)
T KOG2059|consen  565 VLKEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPGK-QPIYTIPLSNI---RAVEKLEEKSF-KMKNVFQVVHT  639 (800)
T ss_pred             eecccceEeccccccchhhhhhhheEEEeccceeEEecCCcc-CcccceeHHHH---HHHHHhhhhcc-CCCceEEEEec
Confidence            445555555322    22367999999999999999999977 69999999876   33554443343 45789999999


Q ss_pred             CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         255 QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       255 ~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +|+.||+|.+-.|.++|+++|....
T Consensus       640 drtly~Q~~n~vEandWldaL~kvs  664 (800)
T KOG2059|consen  640 DRTLYVQAKNCVEANDWLDALRKVS  664 (800)
T ss_pred             CcceeEecCCchHHHHHHHHHHHHh
Confidence            9999999999999999999999854

>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain

Probab=98.68  E-value=3.6e-07  Score=70.85  Aligned_cols=93  Identities=19%  Similarity=0.195  Sum_probs=69.4

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC--CC--CCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEE
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK--EK--KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRH  133 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~--~~--~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~  133 (321)
                      .++|-|+|-.  .+.-+.|+|.|.  ++.|.|=..  ..  -...+.|+|.++.+.-.++..+-+|+|+|.    +..+.
T Consensus         5 i~eG~L~K~~--rk~~~~R~ffLF--nD~LvY~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~~~~n~f~I~----~~~kS   76 (104)
T cd01218           5 VGEGVLTKMC--RKKPKQRQFFLF--NDILVYGNIVISKKKYNKQHILPLEGVQVESIEDDGIERNGWIIK----TPTKS   76 (104)
T ss_pred             EecCcEEEee--cCCCceEEEEEe--cCEEEEEEeecCCceeeEeeEEEccceEEEecCCcccccceEEEe----cCCeE
Confidence            4689999988  355678999999  889998543  22  244688999998543222223456888774    56799


Q ss_pred             EEEEeCChHHHHHHHHHHHhhhhhh
Q psy9639         134 IYVYHEESQSIMNWYHAIRNAKFHR  158 (321)
Q Consensus       134 ~~l~a~s~~e~~~W~~aLr~a~~~~  158 (321)
                      +.++|+|+++..+|+++|..+.-..
T Consensus        77 f~v~A~s~~eK~eWl~~i~~ai~~~  101 (104)
T cd01218          77 FAVYAATETEKREWMLHINKCVTDL  101 (104)
T ss_pred             EEEEcCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998876543

Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>KOG4424|consensus

Probab=98.62  E-value=1.7e-07  Score=90.45  Aligned_cols=222  Identities=20%  Similarity=0.208  Sum_probs=141.2

Q ss_pred             cccccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-C-----CCCceeEEeccceEEEeccCCCCCCceeEEEEe
Q psy9639          53 TYITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-E-----KKEPKATLRISELNVVIAPSKIEHPHSLQLTFM  126 (321)
Q Consensus        53 ~~~~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~-----~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~  126 (321)
                      |-..-.|||-|.|....+++-..||++|.  ++.|.|-+. .     .-++...+++.+..+. ......-++.|.+   
T Consensus       268 PsreLiKEG~l~Kis~k~~~~qeRylfLF--Nd~~lyc~~r~~~~~~k~~~r~~~s~~~~~v~-~~~~~~~~~tF~~---  341 (623)
T KOG4424|consen  268 PSRELIKEGQLQKISAKNGTTQERYLFLF--NDILLYCKPRKRLPGSKYEVRARCSISHMQVQ-EDDNEELPHTFIL---  341 (623)
T ss_pred             cHHHHhhccceeeeeccCCCcceeEEEEe--hhHHHhhhhhhhcccceeccceeeccCcchhc-ccccccCCceEEE---
Confidence            43345899999999999999999999999  777777665 2     2233344444444221 1112223555554   


Q ss_pred             ecCceEEEEEEeCChHHHHHHHHHHHhhhhhhcc---------cc------CCC-------------CC--hh-------
Q psy9639         127 KDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQ---------VA------FPS-------------AN--DS-------  169 (321)
Q Consensus       127 ~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~~l~---------~~------~p~-------------~~--~~-------  169 (321)
                       .|..|.+-|.|.|.++..+|+++|+.+.....+         .+      .++             +.  ++       
T Consensus       342 -~G~~r~vel~a~t~~ek~eWv~~I~~~Id~~kq~~eTfr~~s~t~~~~~d~~s~~~~~~l~~r~~~~~r~~~k~~~c~~  420 (623)
T KOG4424|consen  342 -TGKKRGVELQARTEQEKKEWVQAIQDAIDKHKQCRETFRKDSRTPISDNDMKSFSSDYVLGKRKRKAPRRDNKVTSCDS  420 (623)
T ss_pred             -ecccceEEeecCchhhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhccccccccccccccccccCcccccccccchh
Confidence             467899999999999999999999887431100         00      000             00  00       


Q ss_pred             ---------------------------hhhhhh----------------------------------------CCCcceE
Q psy9639         170 ---------------------------ELVKLL----------------------------------------TRDFGRE  182 (321)
Q Consensus       170 ---------------------------~l~~~~----------------------------------------~~~~~k~  182 (321)
                                                 +....+                                        +..-.-+
T Consensus       421 c~e~~~s~t~~R~~~k~~~~vlc~~cs~~~~~l~~~~s~ssrv~~~~~~~~~~a~~s~~~rr~~~l~~~~a~~s~~~~~~  500 (623)
T KOG4424|consen  421 CEETFNSITFRRHRCKAKGAVLCDKCSDFMAKLSYDNSRSSRVCMDRYLTPSGAPGSPPKRRQSILEIELATVSKENVIC  500 (623)
T ss_pred             hcCchhhHHHhhhhhhhccceeeccccchhhhhcccccchhhhhhhhccCCCCCCCCchhcccccccccccccCCCceeh
Confidence                                       000000                                        0011122


Q ss_pred             EEEEEeCCCCCCCcceEEEEEe---CCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEE
Q psy9639         183 GWLWKTGPKNADAYRKRWFTLD---YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQ  259 (321)
Q Consensus       183 G~L~K~g~~~~~~WkkRwfvL~---~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~  259 (321)
                      +.|.+....+ ..|+.-|++.-   ...++-|..+.|......|+|    .||.|...+.....+..+.|.++.....++
T Consensus       501 s~l~~~~~~~-~~g~~a~~~vP~~d~~~~~~Yg~~qDv~a~~~iPl----~~~~v~~pe~~~~~D~~~~~k~~~s~~~~~  575 (623)
T KOG4424|consen  501 SHLKYMEAAG-KTGILAWSVVPKSDPLVDYSYGSPQDVRAQATIPL----PGVEVTIPEFVRREDLFHVFKLVQSHLSWH  575 (623)
T ss_pred             hhHHHHhhcC-ccceeeeeeccCCCCccccccCCcccccccccccc----CccccCCCcccccchhcchhhhhhhcceee
Confidence            2222222223 68999999874   567778999999888999999    445554322222234457788887788999


Q ss_pred             EEcCCHHHHHHHHHHHhhccccccccC
Q psy9639         260 FSALSAPDRDQWIQAVQTGFTFTLKTP  286 (321)
Q Consensus       260 f~A~s~~e~~~Wv~aL~~ai~~~l~~~  286 (321)
                      |.|++++-.++|++.|..|++-++..+
T Consensus       576 ~~a~~~q~qq~wl~~l~~A~~~d~~~~  602 (623)
T KOG4424|consen  576 LAADDEQLQQRWLEVLLLAVSGDLKEK  602 (623)
T ss_pred             eccCCHHHHHHHHHHHHhhhcccccCC
Confidence            999999999999999999997555443

>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A

Probab=98.60  E-value=6.9e-07  Score=71.32  Aligned_cols=91  Identities=19%  Similarity=0.384  Sum_probs=61.9

Q ss_pred             eeeEEEee------cC----CCCCceeeEEEEeccCCeEEeecC-CC--------------CCceeEEeccceEEEeccC
Q psy9639          59 MDGFLMKR------GK----ESGKYHPRRFVLNEINDTIKYYVK-EK--------------KEPKATLRISELNVVIAPS  113 (321)
Q Consensus        59 ~~G~L~K~------g~----~~~~wk~R~fvL~~~~~~L~Yy~~-~~--------------~~pkg~I~l~~~~~~~~~~  113 (321)
                      ++|||..+      |+    ....|+.-|+||.  ++.|..|++ ..              ..|.+.|+|.++.+..+++
T Consensus         2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~--g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~a~~a~d   79 (119)
T PF15410_consen    2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQ--GGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHALAEIASD   79 (119)
T ss_dssp             -EEEEEEEEEEECTTCC---S---EEEEEEEEE--TTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-EEEEETT
T ss_pred             ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEE--CCEEEEEccCcccccCCcccccccccCcceeEEEecceEEEeCcc
Confidence            68998863      22    3467999999999  999999998 21              1344669999988777776


Q ss_pred             CCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         114 KIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       114 ~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      -..++|-|.+. ..+  .+.|.|.|.|.++|.+|+.+|..+
T Consensus        80 Y~Kr~~VFrL~-~~d--g~e~Lfqa~~~~~m~~Wi~~IN~~  117 (119)
T PF15410_consen   80 YTKRKNVFRLR-TAD--GSEYLFQASDEEEMNEWIDAINYA  117 (119)
T ss_dssp             BTTCSSEEEEE--TT--S-EEEEE-SSHHHHHHHHHHHHHH
T ss_pred             cccCCeEEEEE-eCC--CCEEEEECCCHHHHHHHHHHHhhh
Confidence            55688998875 223  478999999999999999999754

>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain

Probab=98.58  E-value=4.2e-07  Score=67.56  Aligned_cols=85  Identities=24%  Similarity=0.318  Sum_probs=58.4

Q ss_pred             cceEEEEEEeCCCCCCCcceEEEEEeC-CeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeE
Q psy9639         179 FGREGWLWKTGPKNADAYRKRWFTLDY-RKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRW  257 (321)
Q Consensus       179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~-~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~  257 (321)
                      +++.|.+.|+.+.   .+++|=++|++ ..|.|.+.. ....+|.|+++..  ...|+..       ....|.|+||+|+
T Consensus         1 Il~~g~v~Kr~gl---f~kkR~LiLTd~PrL~yvdp~-~~~~KgeIp~s~~--~l~v~~~-------~~~~F~I~Tp~rt   67 (89)
T cd01262           1 ILKIGAVKKRKGL---FAKKRQLILTNGPRLIYVDPV-KKVVKGEIPWSDV--ELRVEVK-------NSSHFFVHTPNKV   67 (89)
T ss_pred             Cceeeeeeehhcc---ccceeeEEEecCceEEEEcCC-cCeEEeEeccccc--ceEEEEe-------cCccEEEECCCce
Confidence            3578999998875   47999999985 566565544 5578999999762  1334331       2246999999999


Q ss_pred             EEEEcCCHHHHHHHHHHHhh
Q psy9639         258 YQFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       258 ~~f~A~s~~e~~~Wv~aL~~  277 (321)
                      |+|. +......+|+++|..
T Consensus        68 y~le-D~~~~a~~W~~~I~~   86 (89)
T cd01262          68 YSFE-DPKGRASQWKKAIED   86 (89)
T ss_pred             EEEE-CCCCCHHHHHHHHHH
Confidence            9964 333555556666544

3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain

Probab=98.55  E-value=7.1e-07  Score=69.21  Aligned_cols=76  Identities=14%  Similarity=0.277  Sum_probs=60.6

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC-----CCCCCceeEEEEeecCce
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS-----KIEHPHSLQLTFMKDGST  131 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~-----~~~~~~~~~i~~~~~~~~  131 (321)
                      .+|||+.--....+.|||+|++|.  ..+|.+|.+ .+..+-..|+|+++..+-...     ....+|+|.|.    +.+
T Consensus         1 lkEGWmVHyT~~d~~rKRhYWrLD--sK~Itlf~~e~~skyyKeIPLsEIl~V~~~~~~~~~~~~~~hcFEi~----T~~   74 (117)
T cd01239           1 LKEGWMVHYTSSDNRRKKHYWRLD--SKAITLYQEESGSRYYKEIPLAEILSVSSNNGDSVLAKHPPHCFEIR----TTT   74 (117)
T ss_pred             CccceEEEEecCccceeeeEEEec--CCeEEEEEcCCCCeeeEEeehHHheEEeccCCCcCCCCCCCcEEEEE----ecC
Confidence            379999998888899999999998  999999999 889999999999986543211     12467777664    466


Q ss_pred             EEEEEEeC
Q psy9639         132 RHIYVYHE  139 (321)
Q Consensus       132 R~~~l~a~  139 (321)
                      ++||+..+
T Consensus        75 ~vY~VG~~   82 (117)
T cd01239          75 NVYFVGGE   82 (117)
T ss_pred             EEEEeccc
Confidence            88998664

Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG0690|consensus

Probab=98.50  E-value=1.6e-07  Score=85.64  Aligned_cols=96  Identities=21%  Similarity=0.392  Sum_probs=63.6

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC--CCC----CceeEEeccceEEEeccCCCCCCceeEEEEeecC
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK--EKK----EPKATLRISELNVVIAPSKIEHPHSLQLTFMKDG  129 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~--~~~----~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~  129 (321)
                      ...++|||+|+|...++|+.|||+|.. +|.|.=|+.  .+.    .|..-..+.++..+.  .....||-|-|....-+
T Consensus        14 ~vvkEgWlhKrGE~IknWRpRYF~l~~-DG~~~Gyr~kP~~~~~~p~pLNnF~v~~cq~m~--~erPrPntFiiRcLQWT   90 (516)
T KOG0690|consen   14 DVVKEGWLHKRGEHIKNWRPRYFLLFN-DGTLLGYRSKPKEVQPTPEPLNNFMVRDCQTMK--TERPRPNTFIIRCLQWT   90 (516)
T ss_pred             hhHHhhhHhhcchhhhcccceEEEEee-CCceEeeccCCccCCCCcccccchhhhhhhhhh--ccCCCCceEEEEeeeee
Confidence            468999999999999999999999996 666665554  332    333444444442211  12345666655333211


Q ss_pred             --ceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         130 --STRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       130 --~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                        -.|+  |+++|++++.+|+.||++..-
T Consensus        91 TVIERT--F~ves~~eRq~W~~AIq~vsn  117 (516)
T KOG0690|consen   91 TVIERT--FYVESAEERQEWIEAIQAVSN  117 (516)
T ss_pred             eeeeee--eecCCHHHHHHHHHHHHHHhh
Confidence              1255  578999999999999987643

>KOG0521|consensus

Probab=98.47  E-value=5.5e-08  Score=99.73  Aligned_cols=97  Identities=25%  Similarity=0.452  Sum_probs=78.7

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCe
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQR  256 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r  256 (321)
                      ......|+|+|+.....+.|+||||...++.+.|+..-.+.......+|    ..|+|..+.  ....+.+||+|+++.|
T Consensus       272 ~~~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~~~~~~~~~dL----~~csvk~~~--~~~drr~CF~iiS~tk  345 (785)
T KOG0521|consen  272 LGYRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGADAENVLIEDL----RTCSVKPDA--EQRDRRFCFEIISPTK  345 (785)
T ss_pred             chhhhhhhhhhhcccchhhHHhhhhhhhccccccccccccccccccccc----hhccccCCc--ccccceeeEEEecCCc
Confidence            3456789999887776689999999999999999888777654555566    346676543  2225789999999999


Q ss_pred             EEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         257 WYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       257 ~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +|.|+|+|+.+.+.||.+|++.|
T Consensus       346 s~~lQAes~~d~~~Wi~~i~nsi  368 (785)
T KOG0521|consen  346 SYLLQAESEKDCQDWISALQNSI  368 (785)
T ss_pred             ceEEecCchhHHHHHHHHHHHHH
Confidence            99999999999999999999987

>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A

Probab=98.44  E-value=2e-06  Score=66.58  Aligned_cols=89  Identities=19%  Similarity=0.185  Sum_probs=60.7

Q ss_pred             cceeeEEEeecCCCCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEE
Q psy9639          57 GHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYV  136 (321)
Q Consensus        57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l  136 (321)
                      ..++|++.|+.+..  .++|+|+|. ++..|.|+.......||.|+++....+-.    .....|.    +.+++|+|+|
T Consensus        13 Il~~g~v~K~kgl~--~kkR~liLT-d~PrL~Yvdp~~~~~KGeI~~~~~l~v~~----k~~~~F~----I~tp~RtY~l   81 (104)
T PF14593_consen   13 ILKQGYVKKRKGLF--AKKRQLILT-DGPRLFYVDPKKMVLKGEIPWSKELSVEV----KSFKTFF----IHTPKRTYYL   81 (104)
T ss_dssp             EEEEEEEEEEETTE--EEEEEEEEE-TTTEEEEEETTTTEEEEEE--STT-EEEE----CSSSEEE----EEETTEEEEE
T ss_pred             EEEEEEEEEeeceE--EEEEEEEEc-cCCEEEEEECCCCeECcEEecCCceEEEE----ccCCEEE----EECCCcEEEE
Confidence            46899999998776  999999999 24477777777778899999996532211    1223443    4456799998


Q ss_pred             EeCChHHHHHHHHHHHhhhhh
Q psy9639         137 YHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       137 ~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      ...+ .....|+++|......
T Consensus        82 ~d~~-~~A~~W~~~I~~~~~~  101 (104)
T PF14593_consen   82 EDPE-GNAQQWVEAIEEVKKQ  101 (104)
T ss_dssp             E-TT-S-HHHHHHHHHHHHHH
T ss_pred             ECCC-CCHHHHHHHHHHHHHH
Confidence            8744 4567899999876543

>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain

Probab=98.40  E-value=5.7e-06  Score=63.84  Aligned_cols=91  Identities=19%  Similarity=0.395  Sum_probs=65.0

Q ss_pred             eeeEEE--eecCC--CCCceeeEEEEeccCCeEEeecC-CC---CCceeEEeccceEE---E-----eccCCCCCCceeE
Q psy9639          59 MDGFLM--KRGKE--SGKYHPRRFVLNEINDTIKYYVK-EK---KEPKATLRISELNV---V-----IAPSKIEHPHSLQ  122 (321)
Q Consensus        59 ~~G~L~--K~g~~--~~~wk~R~fvL~~~~~~L~Yy~~-~~---~~pkg~I~l~~~~~---~-----~~~~~~~~~~~~~  122 (321)
                      +||||-  +.|+.  ..+|+++|.||.  +..|..|.. .+   ..|-.+++|.+.--   +     ++.....-|.=|+
T Consensus         2 lEGwlsvP~~~~~~~k~gW~r~yvVv~--~~Kl~lYd~e~~~~~~~p~~vldl~~~fhv~~V~asDVi~a~~kDiP~IF~   79 (112)
T cd01242           2 MEGWLSLPNRTNKSRKPGWKKQYVVVS--SRKILFYNDEQDKENSTPSMILDIDKLFHVRPVTQGDVYRADAKEIPKIFQ   79 (112)
T ss_pred             cceeEEccCCCCccccCCceEEEEEEe--CCEEEEEecCccccCCCcEEEEEccceeeeecccHHHeeecCcccCCeEEE
Confidence            589996  34333  358999999999  899999987 33   45777888765211   1     1122334555677


Q ss_pred             EEEeecCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639         123 LTFMKDGSTRHIYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       123 i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~  153 (321)
                      |.+.  +..|++++-|+++.|...|+.+|+.
T Consensus        80 I~~~--~~~~~lllLA~s~~ek~kWV~~L~~  108 (112)
T cd01242          80 ILYA--NEARDLLLLAPQTDEQNKWVSRLVK  108 (112)
T ss_pred             EEeC--CccceEEEEeCCchHHHHHHHHHHH
Confidence            7764  3459999999999999999999974

Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PLN03119 putative ADP-ribosylation factor GTPase-activating protein AGD14; Provisional

Probab=98.36  E-value=2.6e-07  Score=89.22  Aligned_cols=50  Identities=12%  Similarity=0.213  Sum_probs=41.3

Q ss_pred             CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639           1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE   50 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~   50 (321)
                      |..+||.+||++||+++|....+|..++....++.|||+||++|+|+...
T Consensus        76 Mk~gGN~~AN~iyeanw~~~~~~~P~~sD~e~lr~FIR~KYVeKRF~~~~  125 (648)
T PLN03119         76 LQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQKKYAGAN  125 (648)
T ss_pred             HHHhchHHHHHHHHhhcccccCCCCCCccHHHHHHHHHHHHhhhhccCcC
Confidence            56789999999999999887656545555666788999999999999764

>KOG3640|consensus

Probab=98.35  E-value=6.5e-07  Score=90.53  Aligned_cols=74  Identities=19%  Similarity=0.313  Sum_probs=51.5

Q ss_pred             CCcceEEEEEEe-CCCCCCCcceEEEEEeCCeeEeeeCCCC---CCcceeEEcccccCceEEecCCCCCCCCCCceEEEE
Q psy9639         177 RDFGREGWLWKT-GPKNADAYRKRWFTLDYRKLMYHEEPLS---AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLK  252 (321)
Q Consensus       177 ~~~~k~G~L~K~-g~~~~~~WkkRwfvL~~~~L~Yyk~~~~---~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~  252 (321)
                      .++.-.|||+.- ...+.+.|+||||+|.++.+.|++.|.|   +.|.|.|+|+.|+. -.|.+. +...-.+.+.|.|.
T Consensus       988 idVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~PdDEkrK~Pig~IDLt~CTs-q~ie~a-~rdicar~ntFhie 1065 (1116)
T KOG3640|consen  988 IDVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPDDEKRKVPIGQIDLTKCTS-QSIEEA-RRDICARPNTFHIE 1065 (1116)
T ss_pred             cceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcchhcccCcceeeehhhhhc-cccccc-hhhhccCCceeEEE
Confidence            345667999752 2222368999999999999999998755   45889999988744 233332 22334567888887

>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain

Probab=98.33  E-value=7.2e-06  Score=64.36  Aligned_cols=92  Identities=14%  Similarity=0.221  Sum_probs=70.4

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC-----------CCceeEEeccceEEEeccCCCCCCceeEEEE
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK-----------KEPKATLRISELNVVIAPSKIEHPHSLQLTF  125 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~-----------~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~  125 (321)
                      ++||-|.|-+...+..+.|+|.|.  ++.|.|=+. ..           =..++.++|..+.+.-.|....-+|+|+|. 
T Consensus         5 I~EG~L~ki~~~~~~~q~R~~FLF--d~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~~~V~d~~d~~~~knaF~I~-   81 (112)
T cd01261           5 IMEGTLTRVGPSKKAKHERHVFLF--DGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRKVDINDKPDSSEYKNAFEII-   81 (112)
T ss_pred             cccCcEEEEecccCCcceEEEEEe--cCeEEEEEeccCcccccccccceEEEEEEEeeeeeEEEEcCCCcccCceEEEE-
Confidence            578999999988888999999999  999988776 22           234567888887655444433457888874 


Q ss_pred             eecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         126 MKDGSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       126 ~~~~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                        ...++.+.|+|.++++..+|+.+|-.+
T Consensus        82 --~~~~~s~~l~Akt~eeK~~Wm~~l~~~  108 (112)
T cd01261          82 --LKDGNSVIFSAKNAEEKNNWMAALISV  108 (112)
T ss_pred             --cCCCCEEEEEECCHHHHHHHHHHHHHH
Confidence              112478999999999999999998754

Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain

Probab=98.31  E-value=5.4e-06  Score=64.37  Aligned_cols=95  Identities=17%  Similarity=0.248  Sum_probs=64.2

Q ss_pred             EEEEEEeCCC---CCCCcceEEEEEeCCeeEeeeCCCC-----CCcceeEEcccccCceE-EecCCC-CCCCCCCceEEE
Q psy9639         182 EGWLWKTGPK---NADAYRKRWFTLDYRKLMYHEEPLS-----AYPKGEIFLGHCSDGYT-VRLGVP-PGAKDQGFTFTL  251 (321)
Q Consensus       182 ~G~L~K~g~~---~~~~WkkRwfvL~~~~L~Yyk~~~~-----~~~~g~i~L~~~~~~~~-V~~~~~-~~~~~~~~~F~i  251 (321)
                      -|||..+-..   ..+.||.||++|++..|+.|+++.-     ..|.-..+|-.+  .+. |+.... +...+.++||.|
T Consensus         2 mGW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~P~s~e~w~~p~~~y~L~~~--atrvv~~~~~~~~~~~~~~~F~i   79 (108)
T cd01258           2 IGWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETPPLSVEDWSRPLYVYKLYDV--ATRLVKNSSTRRLNDQRDNCFLI   79 (108)
T ss_pred             ceecccccCCCCccccccceEEEEEcCCcEEEEeCCCCCHHHHhChhhhChhHHh--hhheeccCCccCcCCCCceEEEE
Confidence            3888766322   2378999999999999999998754     235555555211  011 221111 111246789999


Q ss_pred             EeCC--eEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         252 KTPQ--RWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       252 ~t~~--r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      .+..  .+++|+.|+..|+..|..||+++
T Consensus        80 rtg~~vesh~fsVEt~~dL~~W~raiv~g  108 (108)
T cd01258          80 RTGTQVENHYLRVETHRDLASWERALVRG  108 (108)
T ss_pred             EcCCceeeEEEEecCHHHHHHHHHHHhcC
Confidence            9875  79999999999999999999764

Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PLN02866 phospholipase D

Probab=98.30  E-value=1.8e-05  Score=82.32  Aligned_cols=132  Identities=17%  Similarity=0.221  Sum_probs=89.6

Q ss_pred             cceEEEEEEeC-----C-C--C-----------CCCcceEEEEEeCCeeEeeeCCCCCCcceeEEccccc-----CceEE
Q psy9639         179 FGREGWLWKTG-----P-K--N-----------ADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCS-----DGYTV  234 (321)
Q Consensus       179 ~~k~G~L~K~g-----~-~--~-----------~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~-----~~~~V  234 (321)
                      -.++||+.|+.     + .  .           ...|+||||+|+++.|.|.+++.+..+..+|.+...-     ....+
T Consensus       182 K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~~~~~~~v~lfD~~~~~~~~~~~~~  261 (1068)
T PLN02866        182 KLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDAKPLDIIVFDVLPASNGNGEGQI  261 (1068)
T ss_pred             CcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCCCCceeEEEEEecccccccCCCcce
Confidence            46899999981     1 0  0           2469999999999999999999888888877664211     00111


Q ss_pred             ecCCC-CCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhcc--------------ccccccC----ceEEEEecC
Q psy9639         235 RLGVP-PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGF--------------TFTLKTP----QRWYQFSAL  295 (321)
Q Consensus       235 ~~~~~-~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai--------------~~~l~~~----~~~~~l~a~  295 (321)
                      ..... .......+.|.|.+.+|+..|.+.|...+..|+.+|+.+.              +|....+    .....+..+
T Consensus       262 ~~~~~~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~~~~~~~~~~hRF~SFAP~r~~~~~gN~vk~LvD  341 (1068)
T PLN02866        262 SLAKEIKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGLTEDGSQAQWFID  341 (1068)
T ss_pred             eecccccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHhccCccccccCcCCCcCCCccccCCCCEEEEEeC
Confidence            11110 1111346899999999999999999999999999999986              1222221    123455556


Q ss_pred             CHHHHHHHHHHHHHh
Q psy9639         296 SAPDRDQWIQAVQTV  310 (321)
Q Consensus       296 s~~e~~~Wi~al~~~  310 (321)
                      -++-+..=++||..|
T Consensus       342 G~dyF~AL~eAIe~A  356 (1068)
T PLN02866        342 GHAAFEAIASAIENA  356 (1068)
T ss_pred             HHHHHHHHHHHHHhc
Confidence            666666666666665

>KOG2059|consensus

Probab=98.29  E-value=1.2e-06  Score=86.48  Aligned_cols=93  Identities=20%  Similarity=0.433  Sum_probs=73.5

Q ss_pred             cceeeEEEeecCCC-----CCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEE--eccCCCCCCceeEEEEeecC
Q psy9639          57 GHMDGFLMKRGKES-----GKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVV--IAPSKIEHPHSLQLTFMKDG  129 (321)
Q Consensus        57 ~~~~G~L~K~g~~~-----~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~--~~~~~~~~~~~~~i~~~~~~  129 (321)
                      ..++|.+.|+.+..     .+||+|||.|.  ...|.|-++....|.+.|+|+++..+  +.....+..|.||+.+..  
T Consensus       565 v~k~glm~kr~~gr~~~~~~~FKKryf~LT--~~~Ls~~Ksp~~q~~~~Ipl~nI~avEklee~sF~~knv~qVV~~d--  640 (800)
T KOG2059|consen  565 VLKEGLMIKRAQGRGRFGKKNFKKRYFRLT--TEELSYAKSPGKQPIYTIPLSNIRAVEKLEEKSFKMKNVFQVVHTD--  640 (800)
T ss_pred             eecccceEeccccccchhhhhhhheEEEec--cceeEEecCCccCcccceeHHHHHHHHHhhhhccCCCceEEEEecC--
Confidence            35566666654332     57999999999  89999999988889999999998543  122346788899987543  


Q ss_pred             ceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         130 STRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       130 ~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                        |++|+.|.+..|..+|+++|+...
T Consensus       641 --rtly~Q~~n~vEandWldaL~kvs  664 (800)
T KOG2059|consen  641 --RTLYVQAKNCVEANDWLDALRKVS  664 (800)
T ss_pred             --cceeEecCCchHHHHHHHHHHHHh
Confidence              899999999999999999997654

>PLN03131 hypothetical protein; Provisional

Probab=98.28  E-value=4.3e-07  Score=88.39  Aligned_cols=50  Identities=12%  Similarity=0.181  Sum_probs=40.7

Q ss_pred             CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639           1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE   50 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~   50 (321)
                      |...||.+||++||++++....++..++....++.|||+|||+|+|+.+.
T Consensus        76 Mk~gGN~~AN~iyeanwd~~r~~lP~~sd~ekrr~FIR~KYVeKRFa~~~  125 (705)
T PLN03131         76 LQNGGNQRAREIYLKDWDQQRQRLPDNSKVDKIREFIKDIYVDKKYAGGK  125 (705)
T ss_pred             HHHhccHHHHHHHHhhcccccCCCCCCccHHHHHHHHHHHHhhhhhhcCC
Confidence            56789999999999999876555444555566788999999999999754

>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain

Probab=98.25  E-value=8.9e-07  Score=67.67  Aligned_cols=96  Identities=16%  Similarity=0.188  Sum_probs=70.4

Q ss_pred             CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe-CCe
Q psy9639         178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT-PQR  256 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t-~~r  256 (321)
                      +++..||+.|.|+-+...|++|||-|-.++|.+|....+ .....|.+..+.+++   ... ... ....|+.|.. .++
T Consensus         2 DcIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~~-~~~eLi~M~~i~~V~---~e~-~~i-K~~~CI~ik~k~~~   75 (116)
T cd01240           2 DCIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESEA-NKPELITMDQIEDVS---VEF-QQI-KEENCILLKIRDEK   75 (116)
T ss_pred             ceEEeeehhhhCCHHHHHHHHHHheeCcceeeecccccc-cCCcEEEeehhhhcc---hhh-eee-ccCceEEEEEcCCc
Confidence            678899999999887789999999999999999755444 334456665543321   110 111 2346888886 478


Q ss_pred             EEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         257 WYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       257 ~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .|++.++++-+..+|...|++|-
T Consensus        76 k~vlt~~d~i~l~qW~~elr~a~   98 (116)
T cd01240          76 KIVLTNSDEIELKQWKKELRDAH   98 (116)
T ss_pred             eEEEecCCcHHHHHHHHHHHHHH
Confidence            89999999999999999988764

Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.22  E-value=3.1e-06  Score=83.38  Aligned_cols=98  Identities=22%  Similarity=0.282  Sum_probs=62.6

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEee-eCCCC--CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYH-EEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT  253 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yy-k~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t  253 (321)
                      .++...|||.|.+...  .|++|||.+.++.+... ....+  ......+.+..+..++.|-.   ......+++|.|.+
T Consensus       375 sDv~~~G~l~k~~~~~--~wk~ry~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~pv~~---~~~~~~~~~~~i~~  449 (478)
T PTZ00267        375 SDVTHGGYLYKYSSDM--RWKKRYFYIGNGQLRISLSENPENDGVAPKSVNLETVNDVFPVPE---VYSQKHPNQLVLWF  449 (478)
T ss_pred             CCcccceEEeccCCCc--chhhheEEecCCceEEEeccccccCCCCCccccHHHhcccccccH---HhcCCCCceEEEEe
Confidence            4678899999998765  59999999997766653 32211  12223344443333332211   11234678999986


Q ss_pred             -CCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         254 -PQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       254 -~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                       .++.++|.|+|++++++||.+|++++
T Consensus       450 ~~~~~~~~~~~~~~~~~~W~~~~~~~~  476 (478)
T PTZ00267        450 NNGQKIIAYAKTAEDRDQWISKFQRAC  476 (478)
T ss_pred             cCCcEEEEecCChHHHHHHHHHHHHHh
Confidence             57788877777777777777777765

>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain

Probab=98.15  E-value=3.7e-05  Score=60.31  Aligned_cols=94  Identities=16%  Similarity=0.235  Sum_probs=63.8

Q ss_pred             ceeeEEE--eecCCCCCceeeEEEEeccCCeEEeecC-CC--C----CceeEEeccceEE----Eec-----cCCCCCCc
Q psy9639          58 HMDGFLM--KRGKESGKYHPRRFVLNEINDTIKYYVK-EK--K----EPKATLRISELNV----VIA-----PSKIEHPH  119 (321)
Q Consensus        58 ~~~G~L~--K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~--~----~pkg~I~l~~~~~----~~~-----~~~~~~~~  119 (321)
                      ..||||.  |.|+..++|.|+|.||.  +..|..|.. .+  .    .|--+|+|.+-..    +.+     ..+..-|.
T Consensus         3 ~~EGwvkvP~~~~~krGW~r~~vVv~--~~Kl~lYd~e~~k~~~p~~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~   80 (122)
T cd01243           3 AYEGHVKIPKPGGVKKGWQRALVVVC--DFKLFLYDIAEDRASQPSVVISQVLDMRDPEFSVSSVLESDVIHASKKDIPC   80 (122)
T ss_pred             cceeeEeccCCCCcccCceEEEEEEe--CCEEEEEeCCccccCCccCceeEEEEcCCCCEEEEEecHHHccccCcccCCe
Confidence            4699997  55555679999999999  999999987 32  2    3445677743211    112     22233444


Q ss_pred             eeEEEEee---cCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639         120 SLQLTFMK---DGSTRHIYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       120 ~~~i~~~~---~~~~R~~~l~a~s~~e~~~W~~aLr~  153 (321)
                      =|+|+-..   -.+.+++++-|+|+.|..+|+.+|..
T Consensus        81 If~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~  117 (122)
T cd01243          81 IFRVTTSQISASSSKCSTLMLADTEEEKSKWVGALSE  117 (122)
T ss_pred             EEEEEEecccCCCCccEEEEEeCCchHHHHHHHHHHH
Confidence            55654322   12458899999999999999999864

MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain

Probab=98.07  E-value=0.00012  Score=56.92  Aligned_cols=93  Identities=19%  Similarity=0.226  Sum_probs=64.0

Q ss_pred             cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCC---C-CCCcceeEEcccccCceEEecCCCCCC-----CCCCceE
Q psy9639         179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEP---L-SAYPKGEIFLGHCSDGYTVRLGVPPGA-----KDQGFTF  249 (321)
Q Consensus       179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~---~-~~~~~g~i~L~~~~~~~~V~~~~~~~~-----~~~~~~F  249 (321)
                      ++++|-|.+.+... +.=+.|+|.|-++.|.|-|..   . .-.-+|.|+|..    +.|.... ++.     ..-.+.|
T Consensus         2 li~~Gel~~~s~~~-g~~q~R~~FLFD~~LI~CKkd~~r~~~~~yKgri~l~~----~~I~d~~-Dg~~~~~~~~~knaf   75 (109)
T cd01224           2 LFLQGEATRQKQNK-GWNSSRVLFLFDHQMVLCKKDLIRRDHLYYKGRIDLDR----CEVVNIR-DGKMFSSGHTIKNSL   75 (109)
T ss_pred             ceEeeeEEEEeccc-CCcccEEEEEecceEEEEecccccCCcEEEEEEEEccc----EEEEECC-CCccccCCceeEEEE
Confidence            47899999887542 234579999999999999853   2 223589999954    5565432 221     1126889


Q ss_pred             EEEeC--CeEEEEEcCCHHHHHHHHHHHhh
Q psy9639         250 TLKTP--QRWYQFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       250 ~i~t~--~r~~~f~A~s~~e~~~Wv~aL~~  277 (321)
                      .|+..  +..|.|+|.|+++.+.||+||..
T Consensus        76 kl~~~~~~~~~~f~~Kt~e~K~~Wm~a~~~  105 (109)
T cd01224          76 KIYSESTDEWYLFSFKSAERKHRWLSAFAL  105 (109)
T ss_pred             EEEEcCCCeEEEEEECCHHHHHHHHHHHHH
Confidence            99965  47799777777777777777753

Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG3751|consensus

Probab=98.04  E-value=7.1e-06  Score=78.59  Aligned_cols=98  Identities=26%  Similarity=0.374  Sum_probs=71.0

Q ss_pred             cceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccce---EE--Eec---cCCCCCCceeEEEEee
Q psy9639          57 GHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISEL---NV--VIA---PSKIEHPHSLQLTFMK  127 (321)
Q Consensus        57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~---~~--~~~---~~~~~~~~~~~i~~~~  127 (321)
                      ..++|||+-++-..+.|||-||||+  ...|.|+.+ +.++|+.--.|.++   ++  .+.   .-+...++||.|.-..
T Consensus       317 pei~GfL~~K~dgkKsWKk~yf~LR--~SGLYys~K~tsk~~r~Lq~l~~~~~snVYt~i~~rKkyksPTd~~f~~K~~~  394 (622)
T KOG3751|consen  317 PEIQGFLYLKEDGKKSWKKHYFVLR--RSGLYYSTKGTSKEPRHLQCLADLHSSNVYTGIGGRKKYKSPTDYGFCIKPNK  394 (622)
T ss_pred             ccccceeeecccccccceeEEEEEe--cCcceEccCCCCCCchhhHHHHhcccCceEEeecchhccCCCCCceEEeeecc
Confidence            3679999999988899999999999  889999988 88888764444332   21  121   0122245676665444


Q ss_pred             cCce-EEE-EEEeCChHHHHHHHHHHHhhhh
Q psy9639         128 DGST-RHI-YVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       128 ~~~~-R~~-~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      ..+. |.+ +++|+++..+..|+.|||-+++
T Consensus       395 ~~~~~r~lk~lCAEDe~t~~~WltAiRl~Ky  425 (622)
T KOG3751|consen  395 LRNKRRFLKMLCAEDEQTRTCWLTAIRLLKY  425 (622)
T ss_pred             ccCcccceeeeecccchhHHHHHHHHHHHHH
Confidence            3333 556 8999999999999999998875

>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis

Probab=98.03  E-value=0.0001  Score=59.07  Aligned_cols=91  Identities=23%  Similarity=0.379  Sum_probs=51.9

Q ss_pred             EEEEEeCCCC----CCCcceEEEEEeC--CeeEeeeCCC-CCC----cceeEEcccccCceEEecCCCCCCCC----CCc
Q psy9639         183 GWLWKTGPKN----ADAYRKRWFTLDY--RKLMYHEEPL-SAY----PKGEIFLGHCSDGYTVRLGVPPGAKD----QGF  247 (321)
Q Consensus       183 G~L~K~g~~~----~~~WkkRwfvL~~--~~L~Yyk~~~-~~~----~~g~i~L~~~~~~~~V~~~~~~~~~~----~~~  247 (321)
                      .||+|-+..+    .+..++|||-|+.  ..|++..... ...    ..+.+.|.++   ..|.+..+.....    ..+
T Consensus        13 ~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v---~~V~~~~~~~~~~~~~~~~~   89 (123)
T PF12814_consen   13 EWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESV---TEVKDGNPSPPGLKKPDHNK   89 (123)
T ss_pred             cEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeee---EEecCCCCCCccccccccce
Confidence            5788855443    2478999999985  5566655332 111    2345777554   2333322222111    357


Q ss_pred             eEEEEeCCeEEEEEcCCHHHHHHHHHHHh
Q psy9639         248 TFTLKTPQRWYQFSALSAPDRDQWIQAVQ  276 (321)
Q Consensus       248 ~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~  276 (321)
                      +|.|.+++|+.-|.|++.++.+-|+.+|+
T Consensus        90 si~i~t~~R~L~l~a~s~~~~~~W~~aL~  118 (123)
T PF12814_consen   90 SIIIVTPDRSLDLTAPSRERHEIWFNALR  118 (123)
T ss_pred             EEEEEcCCeEEEEEeCCHHHHHHHHHHHH
Confidence            78888999999955555555555555543

During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex

>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain

Probab=98.02  E-value=0.00011  Score=56.20  Aligned_cols=89  Identities=16%  Similarity=0.139  Sum_probs=59.4

Q ss_pred             CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC-CcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC--
Q psy9639         178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA-YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP--  254 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~-~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~--  254 (321)
                      ..+++|.|...+.     =+.|++.|-+..|.|-|...+. ..+..|.++.    ..|.+..    .+.+++|.|...  
T Consensus         3 eLlleg~l~~~~~-----~~eR~vFLFe~~ll~~K~~~~~y~~K~~i~~~~----l~i~e~~----~~d~~~F~v~~~~~   69 (97)
T cd01222           3 DLLLEGRFREHGG-----GKPRLLFLFQTMLLIAKPRGDKYQFKAYIPCKN----LMLVEHL----PGEPLCFRVIPFDD   69 (97)
T ss_pred             ceeeeceEEeecC-----CCceEEEEecccEEEEEecCCeeEEEEEEEecc----eEEecCC----CCCCcEEEEEecCC
Confidence            4577888874433     3469999999999998865443 2356676643    4444422    134789999754  


Q ss_pred             -CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         255 -QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       255 -~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                       .+.|.|+|.|.++++.||++|+.++
T Consensus        70 p~~~~~l~A~s~e~K~~W~~~i~~~i   95 (97)
T cd01222          70 PKGALQLTARNREEKRIWTQQLKRAM   95 (97)
T ss_pred             CceEEEEEecCHHHHHHHHHHHHHHh
Confidence             3789977777777777777776654

Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>KOG3640|consensus

Probab=98.02  E-value=9.2e-06  Score=82.43  Aligned_cols=97  Identities=19%  Similarity=0.430  Sum_probs=71.6

Q ss_pred             cceeeEEEe--ecCCCCCceeeEEEEeccCCeEEeecC-C---CCCceeEEeccceEEE-eccCC---CCCCceeEEE--
Q psy9639          57 GHMDGFLMK--RGKESGKYHPRRFVLNEINDTIKYYVK-E---KKEPKATLRISELNVV-IAPSK---IEHPHSLQLT--  124 (321)
Q Consensus        57 ~~~~G~L~K--~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~---~~~pkg~I~l~~~~~~-~~~~~---~~~~~~~~i~--  124 (321)
                      ....|||.-  -+..++.|+||||+|.  +|++.|.+. +   .+.|.|.|+|+.|+.. +.+..   -+.+|.|.|.  
T Consensus       990 VEYrGFLtmfed~sgfGaWhRyWc~L~--gg~I~fWk~PdDEkrK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~~ 1067 (1116)
T KOG3640|consen  990 VEYRGFLTMFEDGSGFGAWHRYWCALH--GGEIKFWKYPDDEKRKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEVW 1067 (1116)
T ss_pred             eeeeeeeeeeeccCCCchhhhhhHHhc--CCeeeeecCcchhcccCcceeeehhhhhccccccchhhhccCCceeEEEee
Confidence            355799875  5666788999999999  999999987 3   4788999999988442 22221   3577888875  


Q ss_pred             --EeecC-----ceE-EEEEEeCChHHHHHHHHHHHhhh
Q psy9639         125 --FMKDG-----STR-HIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       125 --~~~~~-----~~R-~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                        .+.+.     ..| ...|.||+.+++..|+++|...-
T Consensus      1068 rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL 1106 (1116)
T KOG3640|consen 1068 RPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTL 1106 (1116)
T ss_pred             cccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHH
Confidence              22221     123 46799999999999999998663

>PLN00188 enhanced disease resistance protein (EDR2); Provisional

Probab=97.98  E-value=4.1e-05  Score=76.83  Aligned_cols=100  Identities=14%  Similarity=0.274  Sum_probs=66.3

Q ss_pred             CcceEEEEEEeCCCC--CCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCC-CceEEEE
Q psy9639         178 DFGREGWLWKTGPKN--ADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQ-GFTFTLK  252 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~--~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~-~~~F~i~  252 (321)
                      .+.++|||+.-|...  ..-.++|||||.++.|.|||....  ..|..+..+..   .|.|++.--+...++ -|.|.|.
T Consensus         3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~~~~~pirs~~id~---~~rVed~Gr~~~~g~~~yvl~~Y   79 (719)
T PLN00188          3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDG---NCRVEDRGLKTHHGHMVYVLSVY   79 (719)
T ss_pred             cceEeeEEEEEcccccccccceeEEEEEecchhhhcccCCccccccceeeccCC---CceEeecCceEEcCceEEEEEEe
Confidence            457899999877643  235789999999999999997432  33444444432   245544211111111 2667776


Q ss_pred             eC---CeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         253 TP---QRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       253 t~---~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      ..   .+...|.|-+.+|..+|++||+.|+.
T Consensus        80 n~~~~~~~~~~~a~~~eea~~W~~a~~~a~~  110 (719)
T PLN00188         80 NKKEKYHRITMAAFNIQEALIWKEKIESVID  110 (719)
T ss_pred             cCCCccccEEEecCCHHHHHHHHHHHHHHHh
Confidence            43   57888888888888888888888885

>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain

Probab=97.92  E-value=0.00011  Score=56.25  Aligned_cols=95  Identities=11%  Similarity=-0.005  Sum_probs=62.4

Q ss_pred             cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeC--CCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCe
Q psy9639         179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEE--PLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQR  256 (321)
Q Consensus       179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~--~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r  256 (321)
                      ++.+|=|..-+....+.=++..|.|-++.|.|-.-  .........++|.+    ..|...  .+.+.-+++|.|.++.+
T Consensus         2 ~i~~G~l~e~~~~~~kp~~rv~~FLfND~Lvva~~~~~~ky~~~~~~~L~~----i~V~ni--~D~~~~kNafki~t~~~   75 (100)
T cd01226           2 VILYGELEEFDVETKKPVQRVMLFLLNDRLIVGNINAAGKYVMESTYSLNS----VAVVNV--KDRENAKKVLKLLIFPE   75 (100)
T ss_pred             EEEcCcEEEechhhCCccceEEEEEeccEEEEEEecccceEEEEEEEehHH----eEEEec--CCCcCcCceEEEEeCCc
Confidence            45677777766555334455657777777777543  22233467788854    334332  22234578999999999


Q ss_pred             EEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         257 WYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       257 ~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ++.++|+|+++..+|+..|.+|.
T Consensus        76 s~i~qaes~~~K~eWl~~le~a~   98 (100)
T cd01226          76 SRIYQCESARIKTEWFEELEQAK   98 (100)
T ss_pred             cEEEEeCCHHHHHHHHHHHHHHh
Confidence            99988888888888888777764

Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>KOG0932|consensus

Probab=97.86  E-value=4.1e-06  Score=80.70  Aligned_cols=102  Identities=18%  Similarity=0.291  Sum_probs=68.6

Q ss_pred             hCCCcceEEEEEE---------eCCCCCCCcceEEEEEeCCeeEeeeCCCC-CCcceeEEcccccCceEEecCC--CC-C
Q psy9639         175 LTRDFGREGWLWK---------TGPKNADAYRKRWFTLDYRKLMYHEEPLS-AYPKGEIFLGHCSDGYTVRLGV--PP-G  241 (321)
Q Consensus       175 ~~~~~~k~G~L~K---------~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~-~~~~g~i~L~~~~~~~~V~~~~--~~-~  241 (321)
                      ++...-+.|+|..         +.+.+.++||.-|-+|+|..||+-+++-. .+.+-.-.|.   +..+|+...  +. +
T Consensus       502 psa~~Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey~p~kalse~~lk---navsvHHALAt~Atd  578 (774)
T KOG0932|consen  502 PSAATYKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEYKPGKALSESDLK---NAVSVHHALATPATD  578 (774)
T ss_pred             CCchhhhhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeeccccCcccchhhhhhh---hhhhhhhhhcCCCcc
Confidence            3445678999964         34455679999999999999988776521 1111111122   222333321  11 1


Q ss_pred             CCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         242 AKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       242 ~~~~~~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      -..++|+|.|.|.+ |.|.|+|+|.+||+.||.-|+-+.
T Consensus       579 Y~KKp~Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~vA  617 (774)
T KOG0932|consen  579 YSKKPHVFKLRTADWRVFLFQAPSQEEMQSWIERINLVA  617 (774)
T ss_pred             cccCCceEEEEeccceeEEEeCCCHHHHHHHHHHHHHHH
Confidence            23467999999875 999999999999999999999854

>KOG1739|consensus

Probab=97.82  E-value=3.5e-05  Score=73.26  Aligned_cols=91  Identities=20%  Similarity=0.214  Sum_probs=73.5

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCC--CCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEP--LSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP  254 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~--~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~  254 (321)
                      ..+..+|+|.|-.... .+|+-|||+|+.+.|.||+++  .+--++|.|.|.....++         .....+.|.|.+.
T Consensus        22 gw~e~~G~lskwtnyi-~gwqdRyv~lk~g~Lsyykse~E~~hGcRgsi~l~ka~i~a---------hEfDe~rfdIsvn   91 (611)
T KOG1739|consen   22 GWVERCGVLSKWTNYI-HGWQDRYVVLKNGALSYYKSEDETEHGCRGSICLSKAVITA---------HEFDECRFDISVN   91 (611)
T ss_pred             Cchhhcceeeeeeccc-ccccceEEEEcccchhhhhhhhhhhcccceeeEeccCCccc---------ccchhheeeeEec
Confidence            3456789998887766 799999999999999999986  444589999997642221         1123467999999


Q ss_pred             CeEEEEEcCCHHHHHHHHHHHhh
Q psy9639         255 QRWYQFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       255 ~r~~~f~A~s~~e~~~Wv~aL~~  277 (321)
                      .-..++.|.+.+.++.|+++|..
T Consensus        92 ~nv~~lra~~~~hr~~w~d~L~w  114 (611)
T KOG1739|consen   92 DNVWYLRAQDPDHRQQWIDALEW  114 (611)
T ss_pred             cceeeehhcCcHHHHHHHHHHHH
Confidence            99999999999999999999987

>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis

Probab=97.80  E-value=0.00043  Score=55.49  Aligned_cols=93  Identities=17%  Similarity=0.280  Sum_probs=66.4

Q ss_pred             eeEEEeecCCC-----CCceeeEEEEeccCCeEEeecC-C-CCCc----eeEEeccceEEEeccC--CCCC--CceeEEE
Q psy9639          60 DGFLMKRGKES-----GKYHPRRFVLNEINDTIKYYVK-E-KKEP----KATLRISELNVVIAPS--KIEH--PHSLQLT  124 (321)
Q Consensus        60 ~G~L~K~g~~~-----~~wk~R~fvL~~~~~~L~Yy~~-~-~~~p----kg~I~l~~~~~~~~~~--~~~~--~~~~~i~  124 (321)
                      -.||+|-++..     +.-++|||-|.....+|.+... . ...+    .+.|.|.++..+....  ..+.  +. +...
T Consensus        12 G~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~~~~~~~-~~~s   90 (123)
T PF12814_consen   12 GEWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNPSPPGLKKPD-HNKS   90 (123)
T ss_pred             ccEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeeeEEecCCCCCCccccccc-cceE
Confidence            46899977665     6799999999988889988875 2 1222    2468888886654321  1111  11 3444


Q ss_pred             EeecCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639         125 FMKDGSTRHIYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       125 ~~~~~~~R~~~l~a~s~~e~~~W~~aLr~  153 (321)
                      +.+.+..|++.|-|.+.++.+-|+++|+.
T Consensus        91 i~i~t~~R~L~l~a~s~~~~~~W~~aL~~  119 (123)
T PF12814_consen   91 IIIVTPDRSLDLTAPSRERHEIWFNALRY  119 (123)
T ss_pred             EEEEcCCeEEEEEeCCHHHHHHHHHHHHH
Confidence            55667789999999999999999999974

During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=97.79  E-value=5.9e-05  Score=74.74  Aligned_cols=98  Identities=20%  Similarity=0.279  Sum_probs=62.2

Q ss_pred             cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcc-----------------eeE--EcccccCceEEecCCC
Q psy9639         179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPK-----------------GEI--FLGHCSDGYTVRLGVP  239 (321)
Q Consensus       179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~-----------------g~i--~L~~~~~~~~V~~~~~  239 (321)
                      .+..|.+.+.+...  .||+||+.+.+..+--.....+..|+                 -.|  ++...+.+|.|-....
T Consensus       373 ~~~~g~~~~~~~~~--~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (496)
T PTZ00283        373 TLYEGIVKKQSSDL--SWKRRYLCIRGELEKGETLTVDVAPKFKSLDLVLAVSKDTLEQQCISTPFSDLEDVFPVPSKYT  450 (496)
T ss_pred             eeeeeEEecccCCc--ccceeEEEEeeecccCceeecCCCccchhhhhhhhhhhhhhhhhcccCchhhhcccccccHHhh
Confidence            46789998877665  69999999974322211111111111                 112  4444444454432211


Q ss_pred             CCCCCCCceEEEEe-CCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         240 PGAKDQGFTFTLKT-PQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       240 ~~~~~~~~~F~i~t-~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      .  .+.+|.|.|.+ ++|.+.|+|.++++++.||.+||++++
T Consensus       451 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (496)
T PTZ00283        451 G--SNAAHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVLG  490 (496)
T ss_pred             C--CCCCcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhcC
Confidence            1  13579999984 689999999999999999999998875

>KOG3751|consensus

Probab=97.77  E-value=7.7e-05  Score=71.67  Aligned_cols=101  Identities=22%  Similarity=0.316  Sum_probs=66.7

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcc--cccCceEEecCCCCCCCCCCceEEEEeC
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLG--HCSDGYTVRLGVPPGAKDQGFTFTLKTP  254 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~--~~~~~~~V~~~~~~~~~~~~~~F~i~t~  254 (321)
                      ....++|+|+-++... |+|||-||+|+..-|||+-..+...|+..-.|.  ...++|+.--..-.-....+++|-|...
T Consensus       315 ~~pei~GfL~~K~dgk-KsWKk~yf~LR~SGLYys~K~tsk~~r~Lq~l~~~~~snVYt~i~~rKkyksPTd~~f~~K~~  393 (622)
T KOG3751|consen  315 SPPEIQGFLYLKEDGK-KSWKKHYFVLRRSGLYYSTKGTSKEPRHLQCLADLHSSNVYTGIGGRKKYKSPTDYGFCIKPN  393 (622)
T ss_pred             CCccccceeeeccccc-ccceeEEEEEecCcceEccCCCCCCchhhHHHHhcccCceEEeecchhccCCCCCceEEeeec
Confidence            3457899999887666 899999999999999998877776665322221  1224454432110000112466666632


Q ss_pred             ----C-e-EEEEEcCCHHHHHHHHHHHhhc
Q psy9639         255 ----Q-R-WYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       255 ----~-r-~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                          . | -=+|+||++..+..|+.||+-+
T Consensus       394 ~~~~~~r~lk~lCAEDe~t~~~WltAiRl~  423 (622)
T KOG3751|consen  394 KLRNKRRFLKMLCAEDEQTRTCWLTAIRLL  423 (622)
T ss_pred             cccCcccceeeeecccchhHHHHHHHHHHH
Confidence                1 2 3368999999999999999874

>KOG0521|consensus

Probab=97.72  E-value=1.8e-05  Score=81.45  Aligned_cols=104  Identities=17%  Similarity=0.328  Sum_probs=77.0

Q ss_pred             cccceeeEEEeecCC-CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639          55 ITGHMDGFLMKRGKE-SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR  132 (321)
Q Consensus        55 ~~~~~~G~L~K~g~~-~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R  132 (321)
                      ....++|+|.|+... .+.|.||||-..  ++.|.|+.. .+......++|-.+.+...+.......+|+|    .+.++
T Consensus       272 ~~~~~~~~l~~k~~~~~~tw~r~~f~~q--~~~l~~~~r~~~~~~~~~~dL~~csvk~~~~~~drr~CF~i----iS~tk  345 (785)
T KOG0521|consen  272 LGYRMEGYLRKKASNASKTWKRRWFSIQ--DGQLGYQHRGADAENVLIEDLRTCSVKPDAEQRDRRFCFEI----ISPTK  345 (785)
T ss_pred             chhhhhhhhhhhcccchhhHHhhhhhhh--ccccccccccccccccccccchhccccCCcccccceeeEEE----ecCCc
Confidence            355778999988766 688999999998  899999998 5555455555555543322322345556554    34789


Q ss_pred             EEEEEeCChHHHHHHHHHHHhhhhhhccccCC
Q psy9639         133 HIYVYHEESQSIMNWYHAIRNAKFHRLQVAFP  164 (321)
Q Consensus       133 ~~~l~a~s~~e~~~W~~aLr~a~~~~l~~~~p  164 (321)
                      ++.++|+|+.+..+|+.+|+.+....+...+|
T Consensus       346 s~~lQAes~~d~~~Wi~~i~nsi~s~l~~~~~  377 (785)
T KOG0521|consen  346 SYLLQAESEKDCQDWISALQNSILSALNSAFL  377 (785)
T ss_pred             ceEEecCchhHHHHHHHHHHHHHHHHHhccCc
Confidence            99999999999999999999988766655544

>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain

Probab=97.62  E-value=0.00037  Score=52.76  Aligned_cols=82  Identities=20%  Similarity=0.231  Sum_probs=60.4

Q ss_pred             CCcceEEEEEe----CCeeEeeeC--CCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe-CCeEEEEEcCCHH
Q psy9639         194 DAYRKRWFTLD----YRKLMYHEE--PLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT-PQRWYQFSALSAP  266 (321)
Q Consensus       194 ~~WkkRwfvL~----~~~L~Yyk~--~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t-~~r~~~f~A~s~~  266 (321)
                      ..|+|.=.+|.    |..|.+|-.  ++...|+-.|+...+.+   |+.+.+-...++.+.|.|.. ++--|.|.|.+++
T Consensus        19 ~~WqkcRl~L~~~~gg~~le~~~~~pPKssrpk~~v~C~~I~E---vR~tt~LEmPD~~nTFvLK~~~~~eyI~Ea~d~~   95 (107)
T cd01231          19 ARWQRGRLVLRKAVGGYMLEFYLPLPPKSSKPKLQVACSSISE---VRECTRLEMPDNLYTFVLKVDDNTDIIFEVGDEQ   95 (107)
T ss_pred             cccceeeEEEEecCCCceEEEEccCCCCCCCCccccchhhhhh---hhhcccccccCcccEEEEEecCCceEEEEcCCHH
Confidence            47888666665    445555555  78888988888877654   45554444456778999985 4578999999999


Q ss_pred             HHHHHHHHHhhc
Q psy9639         267 DRDQWIQAVQTG  278 (321)
Q Consensus       267 e~~~Wv~aL~~a  278 (321)
                      +|++|+..|+.|
T Consensus        96 q~~SWla~Ir~C  107 (107)
T cd01231          96 QLNSWLAELRYC  107 (107)
T ss_pred             HHHHHHHHHhcC
Confidence            999999999864

LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.

>KOG0248|consensus

Probab=97.62  E-value=2.2e-05  Score=77.33  Aligned_cols=93  Identities=11%  Similarity=0.284  Sum_probs=74.3

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP  254 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~  254 (321)
                      ....++||+.+.+.+. +.|+||||+++.+.+.||+.+.+  .+|+|.|++.+.   +.+..      .+....|++++.
T Consensus       247 e~~ekSgy~~~~~s~~-k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~d~~s~---~~~~~------~~~s~~fqli~~  316 (936)
T KOG0248|consen  247 ETMEKSGYWTQLTSRI-KSLKRRYVVFKNGQISFYRKHNNRDEEPASKIDIRSV---TKLEQ------QGAAYAFQLITS  316 (936)
T ss_pred             chhhcccchhcchHHH-HHHHhHheeeccceEEEEEcCCCccccccCccccccc---ceeec------cchhHHhhhhhh
Confidence            3457899999999777 89999999999999999998754  568888887542   33221      123467999999


Q ss_pred             CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         255 QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       255 ~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ..+|+|-++|+.-..+|+..|+.+|
T Consensus       317 t~~~~~~~~s~~lt~dw~~iL~~~i  341 (936)
T KOG0248|consen  317 TDKMNFMTESERTTHDWVTILSAAI  341 (936)
T ss_pred             ceeEEEeccChhhhhhhHHHHHHHH
Confidence            9999999999999999999888766

>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain

Probab=97.60  E-value=0.00051  Score=51.19  Aligned_cols=86  Identities=15%  Similarity=0.175  Sum_probs=61.3

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEE
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVY  137 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~  137 (321)
                      .+.|.+.|+.+.  .+++|-++|. +..-|.|........||.|+++.++..+..   -.++.|    .+.+++|+|+|.
T Consensus         2 l~~g~v~Kr~gl--f~kkR~LiLT-d~PrL~yvdp~~~~~KgeIp~s~~~l~v~~---~~~~~F----~I~Tp~rty~le   71 (89)
T cd01262           2 LKIGAVKKRKGL--FAKKRQLILT-NGPRLIYVDPVKKVVKGEIPWSDVELRVEV---KNSSHF----FVHTPNKVYSFE   71 (89)
T ss_pred             ceeeeeeehhcc--ccceeeEEEe-cCceEEEEcCCcCeEEeEecccccceEEEE---ecCccE----EEECCCceEEEE
Confidence            368999998875  5799999999 356666666688899999999994333221   122344    345778999996


Q ss_pred             eCChHHHHHHHHHHHhh
Q psy9639         138 HEESQSIMNWYHAIRNA  154 (321)
Q Consensus       138 a~s~~e~~~W~~aLr~a  154 (321)
                       |.......|+.+|..+
T Consensus        72 -D~~~~a~~W~~~I~~~   87 (89)
T cd01262          72 -DPKGRASQWKKAIEDL   87 (89)
T ss_pred             -CCCCCHHHHHHHHHHH
Confidence             4456778899998643

3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain

Probab=97.60  E-value=0.00067  Score=52.23  Aligned_cols=91  Identities=11%  Similarity=0.149  Sum_probs=53.7

Q ss_pred             eeeEEEeecCCC--CCceeeEEEEeccCCeEEeecC---C--C--CCce--eEEeccceEEEeccCCCCCCceeEEEEee
Q psy9639          59 MDGFLMKRGKES--GKYHPRRFVLNEINDTIKYYVK---E--K--KEPK--ATLRISELNVVIAPSKIEHPHSLQLTFMK  127 (321)
Q Consensus        59 ~~G~L~K~g~~~--~~wk~R~fvL~~~~~~L~Yy~~---~--~--~~pk--g~I~l~~~~~~~~~~~~~~~~~~~i~~~~  127 (321)
                      |+|||..+.+..  ..|.+.||.....++.+.+-.-   .  +  ....  ..|.|..+++ -..+.+...++|+|+...
T Consensus         1 k~GYLy~~~k~~~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v~~~e~~~l~sc~~-r~~~~~dRRFCFei~~~~   79 (104)
T cd01249           1 KEGYLYMQEKSKFGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAVAQDETLTLKSCSR-RKTESIDKRFCFDVEVEE   79 (104)
T ss_pred             CCceEEEEcCCCCCCeEEEEEEEEEcCCcEEEEEecccccccccCcccccceEEeeeeccc-cccCCccceeeEeeeecC
Confidence            589999876543  3699888888742334322211   1  1  1111  1334433322 223345667777764322


Q ss_pred             cCceEEEEEEeCChHHHHHHHHHHH
Q psy9639         128 DGSTRHIYVYHEESQSIMNWYHAIR  152 (321)
Q Consensus       128 ~~~~R~~~l~a~s~~e~~~W~~aLr  152 (321)
                        ...++.|+|+|++++..|+.|+.
T Consensus        80 --~~~~~~lQA~Se~~~~~Wi~A~d  102 (104)
T cd01249          80 --KPGVITMQALSEKDRRLWIEAMD  102 (104)
T ss_pred             --CCCeEEEEecCHHHHHHHHHhhc
Confidence              22479999999999999999874

Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>KOG4424|consensus

Probab=97.57  E-value=0.0001  Score=71.61  Aligned_cols=97  Identities=22%  Similarity=0.331  Sum_probs=71.5

Q ss_pred             hCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC----C-CcceeEEcccccCceEEecCCCCCCCCCCceE
Q psy9639         175 LTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS----A-YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTF  249 (321)
Q Consensus       175 ~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~----~-~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F  249 (321)
                      .++..+|+|-|.|.+.+. ..-+.||++|-++.|.|-+....    . .+.-.+.+.    ++.|..   ......++.|
T Consensus       268 PsreLiKEG~l~Kis~k~-~~~qeRylfLFNd~~lyc~~r~~~~~~k~~~r~~~s~~----~~~v~~---~~~~~~~~tF  339 (623)
T KOG4424|consen  268 PSRELIKEGQLQKISAKN-GTTQERYLFLFNDILLYCKPRKRLPGSKYEVRARCSIS----HMQVQE---DDNEELPHTF  339 (623)
T ss_pred             cHHHHhhccceeeeeccC-CCcceeEEEEehhHHHhhhhhhhcccceeccceeeccC----cchhcc---cccccCCceE
Confidence            456779999999999886 78999999999999888765431    1 111122221    122222   1222357889


Q ss_pred             EEEeCCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         250 TLKTPQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       250 ~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .+..++|...|+|.|.++..+||++|+.+|
T Consensus       340 ~~~G~~r~vel~a~t~~ek~eWv~~I~~~I  369 (623)
T KOG4424|consen  340 ILTGKKRGVELQARTEQEKKEWVQAIQDAI  369 (623)
T ss_pred             EEecccceEEeecCchhhHHHHHHHHHHHH
Confidence            999999999999999999999999999998

>PLN02866 phospholipase D

Probab=97.55  E-value=0.0006  Score=71.34  Aligned_cols=98  Identities=17%  Similarity=0.314  Sum_probs=68.1

Q ss_pred             ccceeeEEEee------cCC--------------CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceE-------
Q psy9639          56 TGHMDGFLMKR------GKE--------------SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELN-------  107 (321)
Q Consensus        56 ~~~~~G~L~K~------g~~--------------~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~-------  107 (321)
                      .-.+||+++||      |+.              ...|.+|||||+  ++.|.|..+ .+..|..+|-+...-       
T Consensus       181 ~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k--~~~l~~~~~p~~~~~~~v~lfD~~~~~~~~~~  258 (1068)
T PLN02866        181 PKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLK--PGFLALLEDPFDAKPLDIIVFDVLPASNGNGE  258 (1068)
T ss_pred             CCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEe--ccEEEEEecCCCCceeEEEEEecccccccCCC
Confidence            34789999999      211              135999999999  999999988 777787777665211       


Q ss_pred             --EEeccCCCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         108 --VVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       108 --~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                        ..++.. +...+++...|.+.+++|++.|.+.|...+.+|+.+|+.+..
T Consensus       259 ~~~~~~~~-~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~  308 (1068)
T PLN02866        259 GQISLAKE-IKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGL  308 (1068)
T ss_pred             cceeeccc-ccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHh
Confidence              111111 111123333344557789999999999999999999988753

>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain

Probab=97.53  E-value=0.0023  Score=51.09  Aligned_cols=95  Identities=19%  Similarity=0.120  Sum_probs=52.6

Q ss_pred             cceEEEEEEeCCCC-------CCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCC--------C
Q psy9639         179 FGREGWLWKTGPKN-------ADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGA--------K  243 (321)
Q Consensus       179 ~~k~G~L~K~g~~~-------~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~--------~  243 (321)
                      .+|.|.|......+       ...-+.+|+.|-.+.|.|-+...+.. --+++-... .-..|..+.+...        .
T Consensus         3 LvK~GEL~~l~~~~~~~~~~~k~~~~~vylfLFnDlLl~tkkK~~~~-f~V~dy~~r-~~l~V~~~e~~~~~~~~~~~~~   80 (125)
T cd01221           3 LVKRGELTQLEERGSSNILRKKLKARTIYLFLFNDLLLITKKKLGST-FVVFDYAPR-SFLRVEKIEPDNQKIPLGSNLV   80 (125)
T ss_pred             eEEEeeEEEEeccCCcchhcccccCCcEEEEEecceEEEEEecCCCe-EEEEeeccc-cceEEeeccccccccccccccc
Confidence            35777776543221       11345689999999999987543211 111111110 0122332221111        0


Q ss_pred             CCCceEEEEe------CCeEEEEEcCCHHHHHHHHHHH
Q psy9639         244 DQGFTFTLKT------PQRWYQFSALSAPDRDQWIQAV  275 (321)
Q Consensus       244 ~~~~~F~i~t------~~r~~~f~A~s~~e~~~Wv~aL  275 (321)
                      ..++.|.|..      ..+.+.|+|+|++|+.+||.||
T Consensus        81 ~~~~~F~ltLl~N~~gk~~el~L~a~S~sdr~rWi~Al  118 (125)
T cd01221          81 GRPNLFLLTLLRNADDKQAELLLSADSQSDRERWLSAL  118 (125)
T ss_pred             CCCceEEEEeeccCCCCEEEEEEECCCHHHHHHHHHhc
Confidence            2467888862      2378998888888888888887

Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain

Probab=97.51  E-value=0.0001  Score=56.58  Aligned_cols=94  Identities=16%  Similarity=0.374  Sum_probs=65.5

Q ss_pred             cceeeEEEeecCCC-CCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEecc-CCCCCCceeEEEEeecCceEEE
Q psy9639          57 GHMDGFLMKRGKES-GKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAP-SKIEHPHSLQLTFMKDGSTRHI  134 (321)
Q Consensus        57 ~~~~G~L~K~g~~~-~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~-~~~~~~~~~~i~~~~~~~~R~~  134 (321)
                      .+..|++.|-|+-+ .+|++|||-|-  .+-|.+|.........-|.+.++..+.+. ..+...+|+++... +  .+.+
T Consensus         3 cIvhGyi~KLGGPFls~WQ~Ry~~Lf--PNRLE~~~~~~~~~~eLi~M~~i~~V~~e~~~iK~~~CI~ik~k-~--~~k~   77 (116)
T cd01240           3 CIVHGYIKKLGGPFLSQWQTRYFKLY--PNRLELYGESEANKPELITMDQIEDVSVEFQQIKEENCILLKIR-D--EKKI   77 (116)
T ss_pred             eEEeeehhhhCCHHHHHHHHHHheeC--cceeeecccccccCCcEEEeehhhhcchhheeeccCceEEEEEc-C--CceE
Confidence            56799999999876 67999999999  78888876622233334555554332211 12345678777532 2  3668


Q ss_pred             EEEeCChHHHHHHHHHHHhhh
Q psy9639         135 YVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      ++.++|+-++.+|...||.+-
T Consensus        78 vlt~~d~i~l~qW~~elr~a~   98 (116)
T cd01240          78 VLTNSDEIELKQWKKELRDAH   98 (116)
T ss_pred             EEecCCcHHHHHHHHHHHHHH
Confidence            999999999999999998763

Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or

>PLN00188 enhanced disease resistance protein (EDR2); Provisional

Probab=97.50  E-value=0.00057  Score=68.86  Aligned_cols=100  Identities=21%  Similarity=0.287  Sum_probs=66.6

Q ss_pred             ccceeeEEEeecCCC---CCceeeEEEEeccCCeEEeecC---CCCCceeEEeccceEEEeccCCCCCCceeEEE---Ee
Q psy9639          56 TGHMDGFLMKRGKES---GKYHPRRFVLNEINDTIKYYVK---EKKEPKATLRISELNVVIAPSKIEHPHSLQLT---FM  126 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~---~~wk~R~fvL~~~~~~L~Yy~~---~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~---~~  126 (321)
                      .+.+||||.--|...   ...++|||||.  +..|.||+.   ....|..+..|.....+-......+..+.-.+   |.
T Consensus         3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~--~~~~~~yK~~P~~~~~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn   80 (719)
T PLN00188          3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLE--SRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYN   80 (719)
T ss_pred             cceEeeEEEEEcccccccccceeEEEEEe--cchhhhcccCCccccccceeeccCCCceEeecCceEEcCceEEEEEEec
Confidence            467899999988653   35889999999  999999998   33455555555444332111111122222222   33


Q ss_pred             ecCceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         127 KDGSTRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       127 ~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      ...+.+.+-+.|.+.+|...|+.+|..++.+
T Consensus        81 ~~~~~~~~~~~a~~~eea~~W~~a~~~a~~q  111 (719)
T PLN00188         81 KKEKYHRITMAAFNIQEALIWKEKIESVIDQ  111 (719)
T ss_pred             CCCccccEEEecCCHHHHHHHHHHHHHHHhh
Confidence            3445677889999999999999999888653

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=97.49  E-value=0.00033  Score=69.04  Aligned_cols=92  Identities=21%  Similarity=0.400  Sum_probs=58.8

Q ss_pred             cceeeEEEeecCCCCCceeeEEEEeccCCeEE-eec-C-C-CCCceeEEeccceEEEec-cC--CCCCCceeEEEEeecC
Q psy9639          57 GHMDGFLMKRGKESGKYHPRRFVLNEINDTIK-YYV-K-E-KKEPKATLRISELNVVIA-PS--KIEHPHSLQLTFMKDG  129 (321)
Q Consensus        57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~-Yy~-~-~-~~~pkg~I~l~~~~~~~~-~~--~~~~~~~~~i~~~~~~  129 (321)
                      ...+|||.|.+...+ |++|||.+.  ++.+. .+. . + +..+...+.+..+..++. |.  ...+++.|.+.+.  +
T Consensus       377 v~~~G~l~k~~~~~~-wk~ry~~l~--~~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~pv~~~~~~~~~~~~~i~~~--~  451 (478)
T PTZ00267        377 VTHGGYLYKYSSDMR-WKKRYFYIG--NGQLRISLSENPENDGVAPKSVNLETVNDVFPVPEVYSQKHPNQLVLWFN--N  451 (478)
T ss_pred             cccceEEeccCCCcc-hhhheEEec--CCceEEEeccccccCCCCCccccHHHhcccccccHHhcCCCCceEEEEec--C
Confidence            467999999998765 999999998  44444 333 2 2 122223444544433331 11  2346777776322  2


Q ss_pred             ceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         130 STRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       130 ~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                       .+.+++.++|++++.+|+.+|+.+
T Consensus       452 -~~~~~~~~~~~~~~~~W~~~~~~~  475 (478)
T PTZ00267        452 -GQKIIAYAKTAEDRDQWISKFQRA  475 (478)
T ss_pred             -CcEEEEecCChHHHHHHHHHHHHH
Confidence             245677779999999999999865

>KOG3549|consensus

Probab=97.49  E-value=0.00068  Score=62.26  Aligned_cols=133  Identities=14%  Similarity=0.232  Sum_probs=87.2

Q ss_pred             EEEeCChHHHHHHHHHHHhhhhh----hccccCCCCChhhhhhhhCCCcceEEEEEEe--CCCCCCCcceEEEEEeCCee
Q psy9639         135 YVYHEESQSIMNWYHAIRNAKFH----RLQVAFPSANDSELVKLLTRDFGREGWLWKT--GPKNADAYRKRWFTLDYRKL  208 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a~~~----~l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~--g~~~~~~WkkRwfvL~~~~L  208 (321)
                      .+..++.++..+|+.+|......    .++...-..+       ....++.-||....  +......++.||..|+|..+
T Consensus       240 ii~c~~a~d~~dWL~ait~Ni~~LT~~nmK~~Nrnf~-------v~~qivyMGWvne~~q~~~s~q~y~P~FLaLkG~~~  312 (505)
T KOG3549|consen  240 IIHCDEAADLSDWLKAITDNIVGLTHLNMKLYNRNFA-------VGEQIVYMGWVNEGVQNNISWQSYKPRFLALKGTEV  312 (505)
T ss_pred             eeEEhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------ccceEEEeeeccccccCcccccccCceeEEecCcEE
Confidence            45667889999999998654321    1111111111       23356788999753  33334677899999999999


Q ss_pred             EeeeCCCCCCcceeEEcccccCceE-------EecCCCCCCCCCCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         209 MYHEEPLSAYPKGEIFLGHCSDGYT-------VRLGVPPGAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       209 ~Yyk~~~~~~~~g~i~L~~~~~~~~-------V~~~~~~~~~~~~~~F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +.|..|.-    .+.+.......|.       |.. +.+-...+++||.|... +...||+.+..+|+-+|-++.+.|+
T Consensus       313 y~F~tPPv----~t~dw~rAe~ty~vye~mfki~K-dsd~~D~R~~CF~~qs~~ge~~yfsVEl~seLa~wE~sfq~At  386 (505)
T KOG3549|consen  313 YLFETPPV----NTADWSRAEVTYKVYETMFKIVK-DSDTVDSRQHCFLLQSSGGEPRYFSVELRSELARWENSFQAAT  386 (505)
T ss_pred             EEEcCCCc----chhhhhhhhhhHHHHHHHHHHhc-cccccccccceEEEEcCCCCceEEEEehhhHHHHHHHHHhhHH
Confidence            99998743    2222222222222       211 11122356899999964 6899999999999999999999987

>PF15406 PH_6: Pleckstrin homology domain

Probab=97.47  E-value=0.00035  Score=53.68  Aligned_cols=63  Identities=27%  Similarity=0.411  Sum_probs=43.0

Q ss_pred             eCCeeEee-eCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHh
Q psy9639         204 DYRKLMYH-EEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ  276 (321)
Q Consensus       204 ~~~~L~Yy-k~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~  276 (321)
                      +|.-|.+| +.+....|.|+|+|..+++      ..+    +..+-|.+...+....|.|.|..|++.||.+|+
T Consensus        47 TGKGLLF~~K~~dka~P~GiinLadase------~~~----~g~~kF~f~~~G~khtF~A~s~aERD~Wv~~lk  110 (112)
T PF15406_consen   47 TGKGLLFFSKAEDKASPSGIINLADASE------PEK----DGSNKFHFKIKGHKHTFEAASAAERDNWVAQLK  110 (112)
T ss_pred             cCceEEEEeccccccCCcceEehhhccc------ccc----CCCceEEEEeCCceeeeecCCHHHhccHHHHhh
Confidence            44444444 4445567999999965432      111    123346666688889989999999999998886

>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain

Probab=97.41  E-value=0.00078  Score=50.64  Aligned_cols=83  Identities=17%  Similarity=0.173  Sum_probs=55.8

Q ss_pred             CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCC-------CCCCcceeEEcccccCceEEecCCCCCCCCCCceEE
Q psy9639         178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEP-------LSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFT  250 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~-------~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~  250 (321)
                      ..+++|+|.|....   .=|.|=|.|-++.|.|-+-.       .....+-.|||..+    .+...          .|.
T Consensus         2 ~Lv~eg~lvel~~~---~rK~R~~FLFnDlLvc~~ik~~~~~k~~kY~~~w~IPL~dl----~~~~~----------~~~   64 (96)
T cd01228           2 QLVKDSFLVELVEG---SRKLRHLFLFTDVLLCAKLKKTSRGKHQQYDCKWYIPLADL----SFPSE----------PFR   64 (96)
T ss_pred             cccccceeeeehhC---CCcceEEEeeccEEEEEEeeeccCccccccceeEEEEhHHh----eecch----------hhh
Confidence            35789999988743   45778888999988885421       22234567888543    22211          144


Q ss_pred             EE-eCCeEEEEEcCCHHHHHHHHHHHhh
Q psy9639         251 LK-TPQRWYQFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       251 i~-t~~r~~~f~A~s~~e~~~Wv~aL~~  277 (321)
                      +. +++++|.|.|.|+.|+.+|+.+|+.
T Consensus        65 ~~~~~~KSf~~~asS~~Er~eW~~hI~~   92 (96)
T cd01228          65 IHNKNGKSYTFLLSSDYERSEWRESIQK   92 (96)
T ss_pred             ccccCCceEEEEecCHHHHHHHHHHHHH
Confidence            44 6889999888888888888887754

BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain

Probab=97.28  E-value=0.0052  Score=47.03  Aligned_cols=89  Identities=15%  Similarity=0.167  Sum_probs=64.0

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC-CCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK-KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY  135 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~-~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~  135 (321)
                      .++|-|.-.+.    =+.|+.-|.  +..|.|=+. ++ =..|..|.++++..+=.+  .+.|++|.+. ..+.+.+.+-
T Consensus         5 lleg~l~~~~~----~~eR~vFLF--e~~ll~~K~~~~~y~~K~~i~~~~l~i~e~~--~~d~~~F~v~-~~~~p~~~~~   75 (97)
T cd01222           5 LLEGRFREHGG----GKPRLLFLF--QTMLLIAKPRGDKYQFKAYIPCKNLMLVEHL--PGEPLCFRVI-PFDDPKGALQ   75 (97)
T ss_pred             eeeceEEeecC----CCceEEEEe--cccEEEEEecCCeeEEEEEEEecceEEecCC--CCCCcEEEEE-ecCCCceEEE
Confidence            35676664332    235888888  888888877 43 456778888888543222  2568999884 3345568899


Q ss_pred             EEeCChHHHHHHHHHHHhhh
Q psy9639         136 VYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       136 l~a~s~~e~~~W~~aLr~a~  155 (321)
                      ++|.|.++...|+.+|+.+.
T Consensus        76 l~A~s~e~K~~W~~~i~~~i   95 (97)
T cd01222          76 LTARNREEKRIWTQQLKRAM   95 (97)
T ss_pred             EEecCHHHHHHHHHHHHHHh
Confidence            99999999999999998764

Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain

Probab=97.28  E-value=0.0021  Score=51.39  Aligned_cols=78  Identities=18%  Similarity=0.296  Sum_probs=52.5

Q ss_pred             ceeeEEEEeccCCeEEeecC-CC-------CCceeEEeccceEEEec--cC---CCCCCceeEEEEee--cCceEEEEEE
Q psy9639          73 YHPRRFVLNEINDTIKYYVK-EK-------KEPKATLRISELNVVIA--PS---KIEHPHSLQLTFMK--DGSTRHIYVY  137 (321)
Q Consensus        73 wk~R~fvL~~~~~~L~Yy~~-~~-------~~pkg~I~l~~~~~~~~--~~---~~~~~~~~~i~~~~--~~~~R~~~l~  137 (321)
                      .+.+|+.|.  ++.|.|=+. .+       --|...+.+.++.....  |.   ....+|.|++++..  +|.++.+.++
T Consensus        27 ~~~vylfLF--nDlLl~tkkK~~~~f~V~dy~~r~~l~V~~~e~~~~~~~~~~~~~~~~~~F~ltLl~N~~gk~~el~L~  104 (125)
T cd01221          27 ARTIYLFLF--NDLLLITKKKLGSTFVVFDYAPRSFLRVEKIEPDNQKIPLGSNLVGRPNLFLLTLLRNADDKQAELLLS  104 (125)
T ss_pred             CCcEEEEEe--cceEEEEEecCCCeEEEEeeccccceEEeecccccccccccccccCCCceEEEEeeccCCCCEEEEEEE
Confidence            456899998  889988766 22       12344455544422110  00   11357888887766  4777889999


Q ss_pred             eCChHHHHHHHHHHH
Q psy9639         138 HEESQSIMNWYHAIR  152 (321)
Q Consensus       138 a~s~~e~~~W~~aLr  152 (321)
                      |+|+.|+.+|+.||+
T Consensus       105 a~S~sdr~rWi~Al~  119 (125)
T cd01221         105 ADSQSDRERWLSALA  119 (125)
T ss_pred             CCCHHHHHHHHHhcC
Confidence            999999999999985

Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG3723|consensus

Probab=97.09  E-value=0.00018  Score=69.89  Aligned_cols=97  Identities=20%  Similarity=0.260  Sum_probs=65.7

Q ss_pred             ceEEEEE-EeCCC-CCCCcceEEEEEeCCeeEeeeCC--CCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639         180 GREGWLW-KTGPK-NADAYRKRWFTLDYRKLMYHEEP--LSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ  255 (321)
Q Consensus       180 ~k~G~L~-K~g~~-~~~~WkkRwfvL~~~~L~Yyk~~--~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~  255 (321)
                      +.+|-|. |+|.. ..+.|+-|||+|.|..|.|-+..  .|.. .-.|+|..+..+-+|..  .+..+.-+-.|+|.|.+
T Consensus       736 ~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s~~dS~-~~~IDl~~IRSVk~v~~--kr~~rslpKAFEIFTAD  812 (851)
T KOG3723|consen  736 LIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDSD-DCPIDLSKIRSVKAVAK--KRRDRSLPKAFEIFTAD  812 (851)
T ss_pred             hhcchhhhhccchhhhhhhccceEEecchhhhcccCCCCCCCC-CCCccHHHhhhHHHHHh--hhhhcccchhhheeecC
Confidence            5688886 44442 24789999999999999996643  2221 24588876532211211  11122234679999999


Q ss_pred             eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         256 RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       256 r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .||.|.|.++.-.++|++-|+-|+
T Consensus       813 ~T~ILKaKDeKNAEEWlqCL~Iav  836 (851)
T KOG3723|consen  813 KTYILKAKDEKNAEEWLQCLNIAV  836 (851)
T ss_pred             ceEEeecccccCHHHHHHHHHHHH
Confidence            999988888888888888887755

>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain

Probab=97.09  E-value=0.014  Score=45.43  Aligned_cols=93  Identities=13%  Similarity=0.166  Sum_probs=66.3

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-----CCCCceeEEeccceEEEeccCCC----C--CCceeEEEEe
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-----EKKEPKATLRISELNVVIAPSKI----E--HPHSLQLTFM  126 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-----~~~~pkg~I~l~~~~~~~~~~~~----~--~~~~~~i~~~  126 (321)
                      .++|=|.+.+...+.=+.|.|.|.  |+.|.|=+.     ..-..||.|.|..+.++-.++..    |  -.|+|.|.- 
T Consensus         3 i~~Gel~~~s~~~g~~q~R~~FLF--D~~LI~CKkd~~r~~~~~yKgri~l~~~~I~d~~Dg~~~~~~~~~knafkl~~-   79 (109)
T cd01224           3 FLQGEATRQKQNKGWNSSRVLFLF--DHQMVLCKKDLIRRDHLYYKGRIDLDRCEVVNIRDGKMFSSGHTIKNSLKIYS-   79 (109)
T ss_pred             eEeeeEEEEecccCCcccEEEEEe--cceEEEEecccccCCcEEEEEEEEcccEEEEECCCCccccCCceeEEEEEEEE-
Confidence            357888888865455568999999  999999885     22356899999998765433311    1  245666632 


Q ss_pred             ecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         127 KDGSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       127 ~~~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                       ......+.|+|.++++...|++||...
T Consensus        80 -~~~~~~~~f~~Kt~e~K~~Wm~a~~~e  106 (109)
T cd01224          80 -ESTDEWYLFSFKSAERKHRWLSAFALE  106 (109)
T ss_pred             -cCCCeEEEEEECCHHHHHHHHHHHHHh
Confidence             233456899999999999999998654

Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG3543|consensus

Probab=97.03  E-value=0.00016  Score=70.77  Aligned_cols=98  Identities=26%  Similarity=0.369  Sum_probs=73.4

Q ss_pred             CcceEEEEEEeCCCCCCCcceEEEEEeCCeeE-----eeeCCCCCCcceeEEcccccCceEEecCCCC-CCCCCCceEEE
Q psy9639         178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLM-----YHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP-GAKDQGFTFTL  251 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~-----Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~-~~~~~~~~F~i  251 (321)
                      +.-.+|||+--|.+..+.||+|||+|-.-.-+     -|. +....|.-.|.|    +||+|.-..|. +..+..+-|.-
T Consensus       463 nmkhsgylyaig~nvwkrwkkrffvlvqvsqytfamcsyr-ekkaepqel~ql----dgytvdytdp~pglqgg~~ffna  537 (1218)
T KOG3543|consen  463 NMKHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSYR-EKKAEPQELIQL----DGYTVDYTDPSPGLQGGKHFFNA  537 (1218)
T ss_pred             ccccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhhh-hcccChHHHhhc----cCeeeccCCCCCccccchHHHHH
Confidence            45679999999988888999999999744332     232 233467778888    78888654332 22334466777


Q ss_pred             EeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         252 KTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       252 ~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      +-.+.+..|..+++.++.-||+|+-.|.+
T Consensus       538 vkegdtvifasddeqdr~lwvqamyratg  566 (1218)
T KOG3543|consen  538 VKEGDTVIFASDDEQDRHLWVQAMYRATG  566 (1218)
T ss_pred             hccCceEEeccCchhhhhHHHHHHHHhhC
Confidence            77788999999999999999999999874

>KOG3531|consensus

Probab=96.98  E-value=0.00017  Score=72.70  Aligned_cols=91  Identities=23%  Similarity=0.436  Sum_probs=75.6

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEec--cCCCCCCceeEEEEeecCceEEE
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIA--PSKIEHPHSLQLTFMKDGSTRHI  134 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~--~~~~~~~~~~~i~~~~~~~~R~~  134 (321)
                      ..+|+|..+-++...|+|-|.|..  .-+|.+|++ .|..|..+++|-+.++.+.  ++.+.+++-|.+.|..    -.|
T Consensus       925 qLsg~LlrkfknssgwqkLwvvft--~fcl~fyKS~qD~~~laslPlLgysvs~P~~~d~i~K~~vfkl~fk~----hvy  998 (1036)
T KOG3531|consen  925 QLSGYLLRKFKNSSGWQKLWVVFT--NFCLFFYKSHQDSEPLASLPLLGYSVSIPAEPDPIQKDYVFKLKFKS----HVY  998 (1036)
T ss_pred             hhhHHHHHHhhccccceeeeeeec--ceeeEeecccccccccccccccccccCCCCCCCCcchhheeeeehhh----hHH
Confidence            568999998888899999999999  899999999 9999999999999866542  3345566666665533    458


Q ss_pred             EEEeCChHHHHHHHHHHHhh
Q psy9639         135 YVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a  154 (321)
                      ||.|++.-....|+++|+.+
T Consensus       999 ffraes~yt~~rw~evi~~a 1018 (1036)
T KOG3531|consen  999 FFRAESYYTFERWMEVITDA 1018 (1036)
T ss_pred             HHhhhhhhhhhhHHHHhhcC
Confidence            99999999999999999865

>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain

Probab=96.96  E-value=0.0069  Score=46.98  Aligned_cols=78  Identities=15%  Similarity=0.231  Sum_probs=48.4

Q ss_pred             CCcceEEEEEeCCeeEeeeCCC---CCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-eEEEEEcCCHHHHH
Q psy9639         194 DAYRKRWFTLDYRKLMYHEEPL---SAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-RWYQFSALSAPDRD  269 (321)
Q Consensus       194 ~~WkkRwfvL~~~~L~Yyk~~~---~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-r~~~f~A~s~~e~~  269 (321)
                      ..=..||++|-...|...+...   +-.-+|.+||+    +.+|...+  +..+.++.|+|..+. -+..+.+.|.+|.+
T Consensus        26 qe~~eRyLvLFp~~LlilS~s~r~sGf~yqGkLPL~----~i~v~~lE--d~e~~~~aFeI~G~li~~i~v~C~~~~e~~   99 (111)
T cd01225          26 EEKRERYLVLFPNVLLMLSASPRMSGFIYQGKLPLT----GIIVTRLE--DTEALKNAFEISGPLIERIVVVCNNPQDAQ   99 (111)
T ss_pred             cccceeEEEEcCceEEEEEcCCCccceEEeeeeccc----ccEEechH--hccCccceEEEeccCcCcEEEEeCCHHHHH
Confidence            3456899999999988776532   23458999995    45565322  223567899999763 45564444444444


Q ss_pred             HHHHHHhh
Q psy9639         270 QWIQAVQT  277 (321)
Q Consensus       270 ~Wv~aL~~  277 (321)
                      +|+..|+.
T Consensus       100 ~Wl~hL~~  107 (111)
T cd01225         100 EWVELLNA  107 (111)
T ss_pred             HHHHHHHh
Confidence            44444443

Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PF15404 PH_4: Pleckstrin homology domain

Probab=96.82  E-value=0.004  Score=53.19  Aligned_cols=124  Identities=21%  Similarity=0.208  Sum_probs=72.7

Q ss_pred             eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC-----C------cceeEEcccccCceEEecC-----------C
Q psy9639         181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA-----Y------PKGEIFLGHCSDGYTVRLG-----------V  238 (321)
Q Consensus       181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~-----~------~~g~i~L~~~~~~~~V~~~-----------~  238 (321)
                      ++|.|+.+..+. ..|++++++|..+.|..|+.-...     .      -.-+|+|..+ -+|+-...           +
T Consensus         1 ~sG~LY~K~~kh-s~F~~~~vvL~~G~Li~f~~~~Rs~tG~~~~~~~~~~~~tI~L~dc-YvYSG~lt~~DLl~~~~~~d   78 (185)
T PF15404_consen    1 MSGYLYQKPRKH-STFKKYFVVLIPGFLILFQLFKRSRTGFAKPTVHYEHYLTIPLRDC-YVYSGLLTELDLLYRNQTFD   78 (185)
T ss_pred             CCceeeecCCCC-CCceEEEEEEeCCEEEEEEEEeeccCCcccceEEeEeeeeeccCCc-eEEeccchhhhhhhcccccc
Confidence            479999888877 699999999999999988763211     1      1245666543 11210000           0


Q ss_pred             ---C------C--------CCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHH-------------H-----Hhhcc--cc
Q psy9639         239 ---P------P--------GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQ-------------A-----VQTGF--TF  281 (321)
Q Consensus       239 ---~------~--------~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~-------------a-----L~~ai--~~  281 (321)
                         |      .        ...+...||.|..+.+.-.+.++..   ..+..             +     -...+  ..
T Consensus        79 ~~~Pg~~~lPRvY~DGw~S~d~d~~~~FvlW~~~kr~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  155 (185)
T PF15404_consen   79 SNNPGHHSLPRVYQDGWKSSDEDEDRCFVLWFGKKRSISRANEN---SSHHGSNDNPSESQADTSATNQGKNPNKIKMVS  155 (185)
T ss_pred             CCCCCCCccccccCCCCeecCccccEEEEEEECCcccCCchhhc---ccccccccccccccccccccccccCcCcceecc
Confidence               0      0        0011236788876654333333222   22210             0     00011  24


Q ss_pred             ccccCceEEEEecCCHHHHHHHHHHHHH
Q psy9639         282 TLKTPQRWYQFSALSAPDRDQWIQAVQT  309 (321)
Q Consensus       282 ~l~~~~~~~~l~a~s~~e~~~Wi~al~~  309 (321)
                      .|..+.++..|.|.|..|++.|+-+|..
T Consensus       156 ~Lg~~gks~VF~ARSRqERD~WV~~I~~  183 (185)
T PF15404_consen  156 RLGVSGKSMVFMARSRQERDLWVLAINT  183 (185)
T ss_pred             ccCCCCcEEEEEeccHHHHHHHHHHHHh
Confidence            5556788999999999999999999974

>PF15404 PH_4: Pleckstrin homology domain

Probab=96.75  E-value=0.034  Score=47.53  Aligned_cols=32  Identities=16%  Similarity=0.325  Sum_probs=28.4

Q ss_pred             eeeEEEeecCCCCCceeeEEEEeccCCeEEeecC
Q psy9639          59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK   92 (321)
Q Consensus        59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~   92 (321)
                      ++|.|..+.+.-..|+++++||.  .|.|.-|..
T Consensus         1 ~sG~LY~K~~khs~F~~~~vvL~--~G~Li~f~~   32 (185)
T PF15404_consen    1 MSGYLYQKPRKHSTFKKYFVVLI--PGFLILFQL   32 (185)
T ss_pred             CCceeeecCCCCCCceEEEEEEe--CCEEEEEEE
Confidence            57999999988899999999999  788887765

>KOG3551|consensus

Probab=96.70  E-value=0.0082  Score=56.07  Aligned_cols=140  Identities=18%  Similarity=0.288  Sum_probs=89.4

Q ss_pred             eEEEEEEeCChHHHHHHHHHHHhhhhhhccccCCCCChhhhhhhh--CCCcceEEEEEEeCCCC-CCCcceEEEEEeCCe
Q psy9639         131 TRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLL--TRDFGREGWLWKTGPKN-ADAYRKRWFTLDYRK  207 (321)
Q Consensus       131 ~R~~~l~a~s~~e~~~W~~aLr~a~~~~l~~~~p~~~~~~l~~~~--~~~~~k~G~L~K~g~~~-~~~WkkRwfvL~~~~  207 (321)
                      .-++++.+.|..+...|+++|..+....+..+.     .++...|  +..+-+-|||.++-+.. .+.|+.-+.+|+...
T Consensus       247 ~~tliLR~kdsa~A~~Wf~AiHa~v~~ll~rvl-----aE~n~~Lg~t~evkHiGWLaeq~~~~G~~~w~P~l~~lTeke  321 (506)
T KOG3551|consen  247 RHTLILRAKDSAEADSWFEAIHANVNTLLTRVL-----AEVNAMLGNTSEVKHIGWLAEQVSGGGISQWKPKLMALTEKE  321 (506)
T ss_pred             cceEEEEccCcHHHHHHHHHHHHHHhhHHHHHH-----HHHHHHhhcccchhhhhhHHhhccCCChhhhhhheeeechhh
Confidence            356789999999999999999876543221110     1111111  22566789998764332 357999999999999


Q ss_pred             eEeeeCCCC-----CCcceeEEcccccCceEEecCCCCC--CCCCCceEEEEeCC----eEEEEEcCCHHHHHHHHHHHh
Q psy9639         208 LMYHEEPLS-----AYPKGEIFLGHCSDGYTVRLGVPPG--AKDQGFTFTLKTPQ----RWYQFSALSAPDRDQWIQAVQ  276 (321)
Q Consensus       208 L~Yyk~~~~-----~~~~g~i~L~~~~~~~~V~~~~~~~--~~~~~~~F~i~t~~----r~~~f~A~s~~e~~~Wv~aL~  276 (321)
                      |..|.+-..     ..|.-+.+|-.. .  -|+......  ..+....|.+.|..    +++.|++|+..|+..|...|-
T Consensus       322 lliYes~P~~keaws~P~~~ypLvaT-R--Lvhsg~~~~s~~~g~~lsFa~RtGTrqGV~thlfrvEThrdLa~WtRslV  398 (506)
T KOG3551|consen  322 LLIYESMPWTKEAWSRPRHTYPLVAT-R--LVHSGSGKGSVIKGLTLSFATRTGTRQGVETHLFRVETHRELAAWTRSLV  398 (506)
T ss_pred             hhhhhcChhhHHHhcChhhhhhhhhh-h--heecCCCCCCCcCCceEEEEEecccccceEEEEEEeccHHHHHHHHHHHH
Confidence            888876432     345556665321 1  122211111  11223567777642    899999999999999999998


Q ss_pred             hc
Q psy9639         277 TG  278 (321)
Q Consensus       277 ~a  278 (321)
                      ++
T Consensus       399 qG  400 (506)
T KOG3551|consen  399 QG  400 (506)
T ss_pred             HH
Confidence            74

>PF15408 PH_7: Pleckstrin homology domain

Probab=96.66  E-value=0.0016  Score=47.69  Aligned_cols=92  Identities=18%  Similarity=0.218  Sum_probs=52.3

Q ss_pred             EEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCC--CCCCCceEEEEeCC-eEE
Q psy9639         182 EGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPG--AKDQGFTFTLKTPQ-RWY  258 (321)
Q Consensus       182 ~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~--~~~~~~~F~i~t~~-r~~  258 (321)
                      +|||+....   ..-+|||.+|++..|.+|.+.... ...++.|.+..-.....+.....  .+-..|.|-...++ |..
T Consensus         1 EGYLY~~E~---~si~rRF~~L~~K~~~~~~~KGG~-~L~sF~L~~s~~s~Pm~~~~~A~~N~Gi~A~G~L~~~~~~~~~   76 (104)
T PF15408_consen    1 EGYLYRDED---SSIQRRFVMLRSKQFNMYEDKGGQ-YLCSFQLSSSVVSHPMVNFSQAVPNLGINAFGFLMYSPSRRHV   76 (104)
T ss_pred             CCeEEEecc---chHHHHHHhhhhceeEEecccCCc-eeeeeehhhhhhhcccccccccCCCCCeeEEEEEEecCCcchh
Confidence            589987643   357899999999999999887653 33445554321110000000000  01112445555554 566


Q ss_pred             EEEcCCHHHHHHHHHHHhh
Q psy9639         259 QFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       259 ~f~A~s~~e~~~Wv~aL~~  277 (321)
                      -+-|+|.+.|+.|+++++.
T Consensus        77 ~~FA~S~~~~~~Wi~~mN~   95 (104)
T PF15408_consen   77 QCFASSKKVCQSWIQVMNS   95 (104)
T ss_pred             hhhhhHHHHHHHHHHHhcC
Confidence            6667777777777777765

>cd01223 PH_Vav Vav pleckstrin homology (PH) domain

Probab=96.57  E-value=0.015  Score=45.68  Aligned_cols=93  Identities=14%  Similarity=0.179  Sum_probs=49.9

Q ss_pred             eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC------CcceeEEcccccCceEEecCCCCCCC----CCCceEE
Q psy9639         181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA------YPKGEIFLGHCSDGYTVRLGVPPGAK----DQGFTFT  250 (321)
Q Consensus       181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~------~~~g~i~L~~~~~~~~V~~~~~~~~~----~~~~~F~  250 (321)
                      .-|.|.-+.... ..=+.||..|-+..|..-|...+.      .-+-.+.|..    +.|......+..    .-.++|.
T Consensus         6 ~DGelk~k~~~~-~k~k~RyiFLFDk~lI~CK~~~~~~~~~~Y~~Ke~~~l~~----~~I~~~~~~d~~~~~~~~~~~f~   80 (116)
T cd01223           6 LDGEVRIKASED-QKTKLRYIFLFDKAVIVCKALGDNTGDMQYTYKDIHDLAD----YKIENNPSRDTEGRDTRWKYGFY   80 (116)
T ss_pred             cCCceEEeEecc-CCCceeEEEEecceEEEEEecCCCCCCccEEhHHhhhhhe----eeeEecCccCcccCCcceEEEEE
Confidence            345555444332 345689999999988888855442      2234455532    444443211211    2357888


Q ss_pred             EEeCC--eEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         251 LKTPQ--RWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       251 i~t~~--r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      |...+  -.|.|.|.|++++..||+||..|
T Consensus        81 L~~~~~~~~~~f~~Ktee~K~kWm~al~~a  110 (116)
T cd01223          81 LAHKQGKTGFTFYFKTEHLRKKWLKALEMA  110 (116)
T ss_pred             EEecCCCccEEEEeCCHHHHHHHHHHHHHH
Confidence            88643  46674444444444444444443

Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG3723|consensus

Probab=96.57  E-value=0.00086  Score=65.27  Aligned_cols=98  Identities=17%  Similarity=0.303  Sum_probs=65.4

Q ss_pred             ceeeEEE-eecC--CCCCceeeEEEEeccCCeEEeecC--CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639          58 HMDGFLM-KRGK--ESGKYHPRRFVLNEINDTIKYYVK--EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR  132 (321)
Q Consensus        58 ~~~G~L~-K~g~--~~~~wk~R~fvL~~~~~~L~Yy~~--~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R  132 (321)
                      ..||-|. |+|+  -.+.|+-|||+|+  +..|.|-+.  .+..-...|+|..+..+-+-.+......+.-.|++-+...
T Consensus       736 ~iEGQLKEKKGrWRf~kRW~TrYFTLS--gA~L~~~kg~s~~dS~~~~IDl~~IRSVk~v~~kr~~rslpKAFEIFTAD~  813 (851)
T KOG3723|consen  736 LIEGQLKEKKGRWRFIKRWKTRYFTLS--GAQLLFQKGKSKDDSDDCPIDLSKIRSVKAVAKKRRDRSLPKAFEIFTADK  813 (851)
T ss_pred             hhcchhhhhccchhhhhhhccceEEec--chhhhcccCCCCCCCCCCCccHHHhhhHHHHHhhhhhcccchhhheeecCc
Confidence            4577776 5664  3578999999999  899999776  3333346788888754432221112222222344445557


Q ss_pred             EEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         133 HIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       133 ~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      ++.+.|.|++...+|++.|..+..+
T Consensus       814 T~ILKaKDeKNAEEWlqCL~IavAH  838 (851)
T KOG3723|consen  814 TYILKAKDEKNAEEWLQCLNIAVAH  838 (851)
T ss_pred             eEEeecccccCHHHHHHHHHHHHHH
Confidence            7999999999999999988766443

>KOG4236|consensus

Probab=96.50  E-value=0.0037  Score=61.01  Aligned_cols=98  Identities=17%  Similarity=0.257  Sum_probs=70.7

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCC---CCCCCCCceEEEEe
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP---PGAKDQGFTFTLKT  253 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~---~~~~~~~~~F~i~t  253 (321)
                      ....++||+..-..+. ..-||.|..|+..++..|.++....--..|+|+.+   .+|+....   -..+..+|||+|.|
T Consensus       411 st~~kEGWmvHyt~~d-~lRkrHYWrldsk~itlfqn~s~~ryYkeIPLsEI---l~v~~~~~~~~vp~~~~phcFEI~T  486 (888)
T KOG4236|consen  411 STKLKEGWMVHYTSKD-NLRKRHYWRLDSKCITLFQNESTNRYYKEIPLSEI---LSVSSNNGFSLVPAGTNPHCFEIRT  486 (888)
T ss_pred             hhhhhcceEEEEechh-hhhhhhhheeccceeEeeecCCCceeEEeecHHHh---heeeccCCcccCCCCCCCceEEEEe
Confidence            4568999998655443 24566788999999999999887777788999876   33443220   12234689999999


Q ss_pred             CCeEEEEEcCC------------HHHHHHHHHHHhhcc
Q psy9639         254 PQRWYQFSALS------------APDRDQWIQAVQTGF  279 (321)
Q Consensus       254 ~~r~~~f~A~s------------~~e~~~Wv~aL~~ai  279 (321)
                      ..-+ ||-.++            .+..+.|-.||+.|.
T Consensus       487 ~~~v-yfVge~p~~~~~~~~g~g~d~a~~w~~ai~~al  523 (888)
T KOG4236|consen  487 ATTV-YFVGENPSSTPGGESGVGLDAAQGWETAIQQAL  523 (888)
T ss_pred             eeEE-EEecCCCCCCccccccccchhhccCchhhhhcc
Confidence            8844 455555            345899999999986

>KOG0818|consensus

Probab=96.45  E-value=0.0013  Score=63.02  Aligned_cols=45  Identities=22%  Similarity=0.270  Sum_probs=39.6

Q ss_pred             ccchHHHHhhhccC------CCCCCCCCCCCChH-HHHHHHHHhhhhccccc
Q psy9639           4 IGNNVSKLKYEMRV------PASYKVPTSSCPQV-LLKEWIRSKYEREEFRH   48 (321)
Q Consensus         4 ~gn~~~~~~~e~~~------p~~~~~p~~~~~~~-~~e~~ir~ky~~~~f~~   48 (321)
                      +.|..||.+||..|      -.+++||+|.|... .+++||||||+...|+.
T Consensus        67 Ln~~gaNsIWEh~Lld~st~~sg~rk~~pqD~~Hp~K~eFIkaKy~~LtFv~  118 (669)
T KOG0818|consen   67 LNNNGANSIWEHSLLDPATIMSGRRKANPQDKVHPNKAEFIRAKYQMLAFVH  118 (669)
T ss_pred             HHhcCcchhhhhhccCchhhhcccCCCCCcCCCCccHHHHHHHHHHheeeec
Confidence            46778999999977      23789999999887 99999999999999997

>KOG1739|consensus

Probab=96.44  E-value=0.0041  Score=59.57  Aligned_cols=89  Identities=16%  Similarity=0.253  Sum_probs=63.6

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC---CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEE
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK---EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHI  134 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~---~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~  134 (321)
                      ...|+|-|--.-...|..|||||.  +|.|.||++   ++-...|.|.|+.....-+.   .....|.|.    .+.-+.
T Consensus        25 e~~G~lskwtnyi~gwqdRyv~lk--~g~Lsyykse~E~~hGcRgsi~l~ka~i~ahE---fDe~rfdIs----vn~nv~   95 (611)
T KOG1739|consen   25 ERCGVLSKWTNYIHGWQDRYVVLK--NGALSYYKSEDETEHGCRGSICLSKAVITAHE---FDECRFDIS----VNDNVW   95 (611)
T ss_pred             hhcceeeeeecccccccceEEEEc--ccchhhhhhhhhhhcccceeeEeccCCccccc---chhheeeeE----ecccee
Confidence            346777777766778999999999  999999999   45578899999877322111   112233332    123456


Q ss_pred             EEEeCChHHHHHHHHHHHhhh
Q psy9639         135 YVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      ++.+.+.+.+..|+.+|.-.+
T Consensus        96 ~lra~~~~hr~~w~d~L~wmk  116 (611)
T KOG1739|consen   96 YLRAQDPDHRQQWIDALEWMK  116 (611)
T ss_pred             eehhcCcHHHHHHHHHHHHHh
Confidence            888999999999999986554

>KOG1451|consensus

Probab=96.35  E-value=0.011  Score=57.95  Aligned_cols=96  Identities=20%  Similarity=0.326  Sum_probs=62.8

Q ss_pred             CCCcceEEEEEEeCC-CCCCCcceEEEEEeCCe--eEe--eeC--CCCCCcceeEEcccccCceEEecCCCCCCCCCCce
Q psy9639         176 TRDFGREGWLWKTGP-KNADAYRKRWFTLDYRK--LMY--HEE--PLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFT  248 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~-~~~~~WkkRwfvL~~~~--L~Y--yk~--~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~  248 (321)
                      ..+..++|||+-+.. ...+.|-|.||+-....  +..  +..  ..+..+...+.|.+|++    +..  ++ .+++||
T Consensus       262 p~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~qk~g~k~g~~~~~~lKsC~R----Rkt--dS-IdKRFC  334 (812)
T KOG1451|consen  262 PTPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPANQKTGTKMGQTATFKLKSCSR----RKT--DS-IDKRFC  334 (812)
T ss_pred             CCCcccceeeeehhhhhccchhhhheeEeecccceEEEeecccCCCCcCCCcceEEehhhcc----Ccc--cc-ccccee
Confidence            346789999997533 22379999999986332  222  111  12222344566655322    221  12 357899


Q ss_pred             EEEEeCC--eEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         249 FTLKTPQ--RWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       249 F~i~t~~--r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      |.|.+.+  .+..++|-|+.++..||+|+--+
T Consensus       335 FDve~~erpgviTmQALSE~drrlWmeAMDG~  366 (812)
T KOG1451|consen  335 FDVEVEERPGVITMQALSEKDRRLWMEAMDGA  366 (812)
T ss_pred             eeeeecccCCeeehHhhhhhHHHHHHHHhcCC
Confidence            9999875  58999999999999999998764

>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain

Probab=96.22  E-value=0.022  Score=44.29  Aligned_cols=87  Identities=13%  Similarity=0.358  Sum_probs=56.1

Q ss_pred             eEEEeecC----CCCCceeeEEEEeccCCeEEeecC-CC-----CCceeEEeccceEE-Eec--cCCC---CCCceeEEE
Q psy9639          61 GFLMKRGK----ESGKYHPRRFVLNEINDTIKYYVK-EK-----KEPKATLRISELNV-VIA--PSKI---EHPHSLQLT  124 (321)
Q Consensus        61 G~L~K~g~----~~~~wk~R~fvL~~~~~~L~Yy~~-~~-----~~pkg~I~l~~~~~-~~~--~~~~---~~~~~~~i~  124 (321)
                      |||..+-.    ....|+.|+++|.  +..|..|+. .-     ..|...-+|-++-. +++  +...   +.+++|   
T Consensus         3 GW~~E~~~~~~~~~~~wrP~F~aL~--~~dl~ly~s~P~s~e~w~~p~~~y~L~~~atrvv~~~~~~~~~~~~~~~F---   77 (108)
T cd01258           3 GWVNEQLSGDDESSQRWRPRFLALK--GSEFLFFETPPLSVEDWSRPLYVYKLYDVATRLVKNSSTRRLNDQRDNCF---   77 (108)
T ss_pred             eecccccCCCCccccccceEEEEEc--CCcEEEEeCCCCCHHHHhChhhhChhHHhhhheeccCCccCcCCCCceEE---
Confidence            78887633    2368999999999  888888887 21     35555555553311 111  1122   344444   


Q ss_pred             EeecCce--EEEEEEeCChHHHHHHHHHHHh
Q psy9639         125 FMKDGST--RHIYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       125 ~~~~~~~--R~~~l~a~s~~e~~~W~~aLr~  153 (321)
                       ...+++  ..-+|..++..|+..|..+|.+
T Consensus        78 -~irtg~~vesh~fsVEt~~dL~~W~raiv~  107 (108)
T cd01258          78 -LIRTGTQVENHYLRVETHRDLASWERALVR  107 (108)
T ss_pred             -EEEcCCceeeEEEEecCHHHHHHHHHHHhc
Confidence             333333  5678999999999999999863

Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=96.20  E-value=0.012  Score=58.49  Aligned_cols=91  Identities=19%  Similarity=0.319  Sum_probs=56.3

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCcee-------------------EEeccceEEEe-ccCCC-
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKA-------------------TLRISELNVVI-APSKI-  115 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg-------------------~I~l~~~~~~~-~~~~~-  115 (321)
                      ..+|.+.|.++... ||+||+++..  ..+.=+.. .+..|+.                   .++++++..+| .|++. 
T Consensus       374 ~~~g~~~~~~~~~~-w~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (496)
T PTZ00283        374 LYEGIVKKQSSDLS-WKRRYLCIRG--ELEKGETLTVDVAPKFKSLDLVLAVSKDTLEQQCISTPFSDLEDVFPVPSKYT  450 (496)
T ss_pred             eeeeEEecccCCcc-cceeEEEEee--ecccCceeecCCCccchhhhhhhhhhhhhhhhhcccCchhhhcccccccHHhh
Confidence            56788888876655 9999999972  21111111 2222221                   12455554444 23322 


Q ss_pred             --CCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         116 --EHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       116 --~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                        +.+|-|.+.|   ..+|.+.|.|.+.+++..|+.+|+.+
T Consensus       451 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (496)
T PTZ00283        451 GSNAAHVFAVAF---KTGRRLLFQARSDPERDAWMQKIQSV  488 (496)
T ss_pred             CCCCCcEEEEEe---cCCcEEEEecCCchhHHHHHHHHHHh
Confidence              2456665543   23488999999999999999999864

>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain

Probab=96.19  E-value=0.033  Score=43.25  Aligned_cols=75  Identities=13%  Similarity=0.186  Sum_probs=54.3

Q ss_pred             ceeeEEEEeccCCeEEeecC----CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCce-EEEEEEeCChHHHHHH
Q psy9639          73 YHPRRFVLNEINDTIKYYVK----EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGST-RHIYVYHEESQSIMNW  147 (321)
Q Consensus        73 wk~R~fvL~~~~~~L~Yy~~----~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~-R~~~l~a~s~~e~~~W  147 (321)
                      =..||+||.  .+.|....-    .+=..+|-++|++++++-..+..+.++.|+|.    |+. -.+.+.+.+.+|+.+|
T Consensus        28 ~~eRyLvLF--p~~LlilS~s~r~sGf~yqGkLPL~~i~v~~lEd~e~~~~aFeI~----G~li~~i~v~C~~~~e~~~W  101 (111)
T cd01225          28 KRERYLVLF--PNVLLMLSASPRMSGFIYQGKLPLTGIIVTRLEDTEALKNAFEIS----GPLIERIVVVCNNPQDAQEW  101 (111)
T ss_pred             cceeEEEEc--CceEEEEEcCCCccceEEeeeecccccEEechHhccCccceEEEe----ccCcCcEEEEeCCHHHHHHH
Confidence            467999999  778776654    33456899999999765333344667887764    322 3467788899999999


Q ss_pred             HHHHHh
Q psy9639         148 YHAIRN  153 (321)
Q Consensus       148 ~~aLr~  153 (321)
                      +..|.+
T Consensus       102 l~hL~~  107 (111)
T cd01225         102 VELLNA  107 (111)
T ss_pred             HHHHHh
Confidence            998864

Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain

Probab=96.14  E-value=0.039  Score=41.57  Aligned_cols=81  Identities=16%  Similarity=0.249  Sum_probs=56.0

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC----CCC----CceeEEeccceEEEeccCCCCCCceeEEEEeecC
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK----EKK----EPKATLRISELNVVIAPSKIEHPHSLQLTFMKDG  129 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~----~~~----~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~  129 (321)
                      .++|+|.|-.  .+.=|.|-|-|.  ++.|.|-+-    ..+    ..+-.|+|.++.....|        |.+.   ..
T Consensus         4 v~eg~lvel~--~~~rK~R~~FLF--nDlLvc~~ik~~~~~k~~kY~~~w~IPL~dl~~~~~~--------~~~~---~~   68 (96)
T cd01228           4 VKDSFLVELV--EGSRKLRHLFLF--TDVLLCAKLKKTSRGKHQQYDCKWYIPLADLSFPSEP--------FRIH---NK   68 (96)
T ss_pred             cccceeeeeh--hCCCcceEEEee--ccEEEEEEeeeccCccccccceeEEEEhHHheecchh--------hhcc---cc
Confidence            4689999876  344577888888  788877542    111    33458999998542221        2221   23


Q ss_pred             ceEEEEEEeCChHHHHHHHHHHHh
Q psy9639         130 STRHIYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       130 ~~R~~~l~a~s~~e~~~W~~aLr~  153 (321)
                      ++.+|.|+|.|..|..+|+.+|+.
T Consensus        69 ~~KSf~~~asS~~Er~eW~~hI~~   92 (96)
T cd01228          69 NGKSYTFLLSSDYERSEWRESIQK   92 (96)
T ss_pred             CCceEEEEecCHHHHHHHHHHHHH
Confidence            468899999999999999999964

BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain

Probab=96.06  E-value=0.089  Score=40.33  Aligned_cols=90  Identities=18%  Similarity=0.116  Sum_probs=58.2

Q ss_pred             eeEEEeecCCCCCce-eeEEEEeccCCeEEeecC-CC--CCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639          60 DGFLMKRGKESGKYH-PRRFVLNEINDTIKYYVK-EK--KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY  135 (321)
Q Consensus        60 ~G~L~K~g~~~~~wk-~R~fvL~~~~~~L~Yy~~-~~--~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~  135 (321)
                      +|=|..-......=+ +..|-|.  ++.|.|-.- ..  -.....++|.++.++-.++..+-.|+|.|.    +..+...
T Consensus         5 ~G~l~e~~~~~~kp~~rv~~FLf--ND~Lvva~~~~~~ky~~~~~~~L~~i~V~ni~D~~~~kNafki~----t~~~s~i   78 (100)
T cd01226           5 YGELEEFDVETKKPVQRVMLFLL--NDRLIVGNINAAGKYVMESTYSLNSVAVVNVKDRENAKKVLKLL----IFPESRI   78 (100)
T ss_pred             cCcEEEechhhCCccceEEEEEe--ccEEEEEEecccceEEEEEEEehHHeEEEecCCCcCcCceEEEE----eCCccEE
Confidence            344444333333333 3435665  788887755 22  233568888888554445545667888764    3446677


Q ss_pred             EEeCChHHHHHHHHHHHhhh
Q psy9639         136 VYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       136 l~a~s~~e~~~W~~aLr~a~  155 (321)
                      ++|+++++..+|+..|..++
T Consensus        79 ~qaes~~~K~eWl~~le~a~   98 (100)
T cd01226          79 YQCESARIKTEWFEELEQAK   98 (100)
T ss_pred             EEeCCHHHHHHHHHHHHHHh
Confidence            89999999999999998775

Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain

Probab=95.81  E-value=0.073  Score=41.99  Aligned_cols=75  Identities=15%  Similarity=0.251  Sum_probs=43.8

Q ss_pred             CcceEEEEEeCCeeEeeeCCCCC----Cc----ceeEEcccccCceEEecCCCCCCCCCCceEEEEeC--C---eEEEEE
Q psy9639         195 AYRKRWFTLDYRKLMYHEEPLSA----YP----KGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP--Q---RWYQFS  261 (321)
Q Consensus       195 ~WkkRwfvL~~~~L~Yyk~~~~~----~~----~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~--~---r~~~f~  261 (321)
                      .=+.|-+.|-...|.|-+...+.    .|    +..|.++.    ..+.+.    ..+.++.|.|...  .   .+|.++
T Consensus        23 K~~eR~vFLFe~~lvfsk~~~~~~~~~~~~Y~yK~~ikls~----l~l~e~----v~gd~~kF~i~~~~~~~~~~~~ilq   94 (114)
T cd01232          23 KGRERRVFLFEQSIIFAKEVKKKKQFGNPKYIYKSKLQVSK----MGLTEH----VEGDPCRFALWSGDPPISDNRIILK   94 (114)
T ss_pred             CCceeEEEEeeceEEEEEEeccCCCCCceeEEEecceeeee----eEeEEc----cCCCCceEEEEeCCCCCCceEEEEE
Confidence            34567777888888887653221    12    45666643    223332    2245677888743  3   688866


Q ss_pred             cCCHHHHHHHHHHHhh
Q psy9639         262 ALSAPDRDQWIQAVQT  277 (321)
Q Consensus       262 A~s~~e~~~Wv~aL~~  277 (321)
                      |.|.++.+.|+..|+.
T Consensus        95 A~s~e~K~~W~~~I~~  110 (114)
T cd01232          95 ANSQETKQEWVKKIRE  110 (114)
T ss_pred             CCCHHHHHHHHHHHHH
Confidence            6666666666666654

Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain

Probab=95.81  E-value=0.093  Score=41.32  Aligned_cols=94  Identities=16%  Similarity=0.262  Sum_probs=59.1

Q ss_pred             eeeEEEeecCCCCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEec---cC--------C---CCCCceeEEE
Q psy9639          59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIA---PS--------K---IEHPHSLQLT  124 (321)
Q Consensus        59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~---~~--------~---~~~~~~~~i~  124 (321)
                      ..|-.+-+-...+.=++|.|.|.++++.|.|....+. ..+.|+|.++..+..   +.        .   ...+.+|.|.
T Consensus         7 ~~G~~~~K~~~~~~~~~~~f~ld~~~~~l~W~~~~~~-~~~~l~i~~IkeIR~G~~~k~~~~~~~~~~~~~~e~~~fTIi   85 (115)
T cd01248           7 QRGSVFIKWDDTSRERRRLFRLDEKGFFLYWKDEGKK-EKKVLDISSIKEIRTGKQPKDLKLRAELNQGNSLEERCFTIV   85 (115)
T ss_pred             hCCCEEEEEcCCCceeeEEEEEcCCCcEEEEeCCCCc-cccEEEehhhhhhhCCCCCcchHHhhhhhcCCCccccEEEEE
Confidence            3444443332323335677999865555655544222 566788888765421   10        0   1334577887


Q ss_pred             EeecCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639         125 FMKDGSTRHIYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       125 ~~~~~~~R~~~l~a~s~~e~~~W~~aLr~  153 (321)
                      |..+.+-.+++|.|+|.++...|+..|+.
T Consensus        86 y~~~~~~k~L~lVA~s~~~a~~W~~gL~~  114 (115)
T cd01248          86 YGTDLNLKSLDLVAPSEEEAKTWVSGLRK  114 (115)
T ss_pred             ECCCCCeeEEEEEECCHHHHHHHHHHHhh
Confidence            76654467899999999999999999873

Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain

Probab=95.78  E-value=0.094  Score=41.29  Aligned_cols=76  Identities=20%  Similarity=0.346  Sum_probs=43.2

Q ss_pred             ceEEEEEe-CCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCC--------C---CCCCceEEEEeCC----eEEEE
Q psy9639         197 RKRWFTLD-YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPG--------A---KDQGFTFTLKTPQ----RWYQF  260 (321)
Q Consensus       197 kkRwfvL~-~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~--------~---~~~~~~F~i~t~~----r~~~f  260 (321)
                      ++|.|.|+ ++...|+.+.... ..+.|+|..+.+   |+.+....        .   .....||.|+...    ++..|
T Consensus        22 ~~~~f~ld~~~~~l~W~~~~~~-~~~~l~i~~Ike---IR~G~~~k~~~~~~~~~~~~~~e~~~fTIiy~~~~~~k~L~l   97 (115)
T cd01248          22 RRRLFRLDEKGFFLYWKDEGKK-EKKVLDISSIKE---IRTGKQPKDLKLRAELNQGNSLEERCFTIVYGTDLNLKSLDL   97 (115)
T ss_pred             eeEEEEEcCCCcEEEEeCCCCc-cccEEEehhhhh---hhCCCCCcchHHhhhhhcCCCccccEEEEEECCCCCeeEEEE
Confidence            46788886 3444455544321 456788876644   33322110        0   1234788888542    57777


Q ss_pred             EcCCHHHHHHHHHHHh
Q psy9639         261 SALSAPDRDQWIQAVQ  276 (321)
Q Consensus       261 ~A~s~~e~~~Wv~aL~  276 (321)
                      .|+|.++++.|+..|+
T Consensus        98 VA~s~~~a~~W~~gL~  113 (115)
T cd01248          98 VAPSEEEAKTWVSGLR  113 (115)
T ss_pred             EECCHHHHHHHHHHHh
Confidence            7777777777766664

Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG3543|consensus

Probab=95.67  E-value=0.0032  Score=62.05  Aligned_cols=97  Identities=18%  Similarity=0.282  Sum_probs=62.8

Q ss_pred             ccceeeEEEeecCCC-CCceeeEEEEeccCCe----EEeecCCCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCc
Q psy9639          56 TGHMDGFLMKRGKES-GKYHPRRFVLNEINDT----IKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGS  130 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~-~~wk~R~fvL~~~~~~----L~Yy~~~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~  130 (321)
                      +-..+|||+--|+.. +.||+|||||-. -..    +.-|..++.+|...|.|.+.++-..+...|-..|-.+ |.....
T Consensus       463 nmkhsgylyaig~nvwkrwkkrffvlvq-vsqytfamcsyrekkaepqel~qldgytvdytdp~pglqgg~~f-fnavke  540 (1218)
T KOG3543|consen  463 NMKHSGYLYAIGRNVWKRWKKRFFVLVQ-VSQYTFAMCSYREKKAEPQELIQLDGYTVDYTDPSPGLQGGKHF-FNAVKE  540 (1218)
T ss_pred             ccccceeehhhhhHHHHHhHhhEEEEEE-hhhhhhHhhhhhhcccChHHHhhccCeeeccCCCCCccccchHH-HHHhcc
Confidence            346689999999875 789999999962 111    1112225678999999999865443322222222222 221122


Q ss_pred             eEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         131 TRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       131 ~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      +-++.|..|+++++.-|++|+-.+
T Consensus       541 gdtvifasddeqdr~lwvqamyra  564 (1218)
T KOG3543|consen  541 GDTVIFASDDEQDRHLWVQAMYRA  564 (1218)
T ss_pred             CceEEeccCchhhhhHHHHHHHHh
Confidence            256889999999999999998555

>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain

Probab=95.33  E-value=0.19  Score=40.69  Aligned_cols=75  Identities=11%  Similarity=0.198  Sum_probs=47.7

Q ss_pred             ceEEEEEeCCeeEeeeCCCC-----CC----cceeEEcccccCceEEecCCCCCCCCCCceEEEEeC--CeEEEEEcCCH
Q psy9639         197 RKRWFTLDYRKLMYHEEPLS-----AY----PKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP--QRWYQFSALSA  265 (321)
Q Consensus       197 kkRwfvL~~~~L~Yyk~~~~-----~~----~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~--~r~~~f~A~s~  265 (321)
                      +.|.+.|-+..+.+-|-..+     ..    -+..|.++..    .+.    .+..+.++.|+|.+.  ..+|.|+|.|.
T Consensus        30 ~eRhVFLFE~~viF~K~~~~~~~~~~~p~Y~yK~~ikls~l----glt----e~v~gd~~kFeiw~~~~~~~yilqA~t~  101 (133)
T cd01227          30 MQRHIFLHEKAVLFCKKREENGEGEKAPSYSFKQSLKMTAV----GIT----ENVKGDTKKFEIWYNAREEVYILQAPTP  101 (133)
T ss_pred             ceeEEEEecceEEEEEEeccCCCCCcceeEEEeeeEEeecc----ccc----ccCCCCccEEEEEeCCCCcEEEEEcCCH
Confidence            56888888888887764421     11    2455655331    122    233345778999864  46888777777


Q ss_pred             HHHHHHHHHHhhcc
Q psy9639         266 PDRDQWIQAVQTGF  279 (321)
Q Consensus       266 ~e~~~Wv~aL~~ai  279 (321)
                      +..+.|++.|+.-+
T Consensus       102 e~K~~Wv~~I~~iL  115 (133)
T cd01227         102 EIKAAWVNEIRKVL  115 (133)
T ss_pred             HHHHHHHHHHHHHH
Confidence            77777777777644

Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>COG5347 GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]

Probab=95.07  E-value=0.018  Score=53.43  Aligned_cols=50  Identities=24%  Similarity=0.299  Sum_probs=38.9

Q ss_pred             CccccchHHHHhhhccCCCC-CCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639           1 MKQIGNNVSKLKYEMRVPAS-YKVPTSSCPQVLLKEWIRSKYEREEFRHPE   50 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~~-~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~   50 (321)
                      |...||..||.+||++.=.. -...........+++||+.||+.+.|+..+
T Consensus        76 m~~gGN~~a~~~~e~~~~~~~~~~~k~~yd~~v~~~y~~~ky~~~~~~~~~  126 (319)
T COG5347          76 MEVGGNSNANRFYEKNLLDQLLLPIKAKYDSSVAKKYIRKKYELKKFIDDS  126 (319)
T ss_pred             HHHhcchhhhhHhccCCCcccccccccccCHHHHHHHHHHHHHhhhccccc
Confidence            56679999999999975331 244455666678999999999999998854

>KOG1737|consensus

Probab=95.06  E-value=0.017  Score=59.42  Aligned_cols=88  Identities=19%  Similarity=0.211  Sum_probs=63.9

Q ss_pred             cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCCCceEEEE-eCC
Q psy9639         179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLK-TPQ  255 (321)
Q Consensus       179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~-t~~  255 (321)
                      .-.+|||.|..... ++|.+|||+|.++.|.||.+...  ..+.|.|++...    .+.     .  +....+.+. ...
T Consensus        77 ~~~~g~l~k~~n~~-~~~~~r~f~l~~g~ls~~~~~~~~~~~~~~~~~~~~a----~i~-----~--~~~~~~~~~~~~~  144 (799)
T KOG1737|consen   77 ASLEGILLKWRNYS-KGPSSRWFVLSGGLLSYYFDNSFSKTTCGGGINLVTA----WIQ-----N--GERMDICSVDGSC  144 (799)
T ss_pred             ccccceeecccccc-CCcccceEEecCcceeeeccCCccccCCCCccccccc----ccc-----c--CCCcccchhhccc
Confidence            34589999998887 89999999999999999977643  456778877331    111     1  111112222 225


Q ss_pred             eEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         256 RWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       256 r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      ++|+..+.+..+.+.|+.++..+
T Consensus       145 q~~~~~~~~~~~~~~~~~~~~l~  167 (799)
T KOG1737|consen  145 QIYLVELSKKLQRQGWLHALELA  167 (799)
T ss_pred             chhhhhhhHHHhhcchhhhhhhc
Confidence            78889999999999999999987

>KOG1737|consensus

Probab=94.98  E-value=0.014  Score=59.90  Aligned_cols=94  Identities=20%  Similarity=0.324  Sum_probs=68.3

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC---CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK---EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR  132 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~---~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R  132 (321)
                      ....+|||.|--...++|.+|||+|.  +|.|.||.+   ....+.|.|.+.....       +..-++.++ ..+++.+
T Consensus        76 ~~~~~g~l~k~~n~~~~~~~r~f~l~--~g~ls~~~~~~~~~~~~~~~~~~~~a~i-------~~~~~~~~~-~~~~~~q  145 (799)
T KOG1737|consen   76 GASLEGILLKWRNYSKGPSSRWFVLS--GGLLSYYFDNSFSKTTCGGGINLVTAWI-------QNGERMDIC-SVDGSCQ  145 (799)
T ss_pred             cccccceeeccccccCCcccceEEec--CcceeeeccCCccccCCCCccccccccc-------ccCCCcccc-hhhcccc
Confidence            34678999999999999999999999  899999976   5667778887755422       111222222 2233467


Q ss_pred             EEEEEeCChHHHHHHHHHHHhhhhhhc
Q psy9639         133 HIYVYHEESQSIMNWYHAIRNAKFHRL  159 (321)
Q Consensus       133 ~~~l~a~s~~e~~~W~~aLr~a~~~~l  159 (321)
                      ++++.+.+..+...|+.+++.+.+...
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~  172 (799)
T KOG1737|consen  146 IYLVELSKKLQRQGWLHALELAPLIAV  172 (799)
T ss_pred             hhhhhhhHHHhhcchhhhhhhccchhh
Confidence            788888888999999999987755433

>PF15406 PH_6: Pleckstrin homology domain

Probab=94.95  E-value=0.086  Score=40.71  Aligned_cols=61  Identities=10%  Similarity=0.297  Sum_probs=43.7

Q ss_pred             CCeEEeecC--CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHH
Q psy9639          84 NDTIKYYVK--EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIR  152 (321)
Q Consensus        84 ~~~L~Yy~~--~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr  152 (321)
                      +..|.+|..  +...|-|+|.|.+++.+ .   .+.++.|.|.  ..|  ..--|.|.|..|++.|+.+|.
T Consensus        48 GKGLLF~~K~~dka~P~GiinLadase~-~---~~g~~kF~f~--~~G--~khtF~A~s~aERD~Wv~~lk  110 (112)
T PF15406_consen   48 GKGLLFFSKAEDKASPSGIINLADASEP-E---KDGSNKFHFK--IKG--HKHTFEAASAAERDNWVAQLK  110 (112)
T ss_pred             CceEEEEeccccccCCcceEehhhcccc-c---cCCCceEEEE--eCC--ceeeeecCCHHHhccHHHHhh
Confidence            566776764  67899999999998542 2   2345666654  344  334579999999999998875

>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain

Probab=94.19  E-value=0.49  Score=37.29  Aligned_cols=77  Identities=21%  Similarity=0.318  Sum_probs=52.1

Q ss_pred             eeeEEEEeccCCeEEeecC-CC----CCc----eeEEeccceEEEeccCCCCCCceeEEEEeecC-ceEEEEEEeCChHH
Q psy9639          74 HPRRFVLNEINDTIKYYVK-EK----KEP----KATLRISELNVVIAPSKIEHPHSLQLTFMKDG-STRHIYVYHEESQS  143 (321)
Q Consensus        74 k~R~fvL~~~~~~L~Yy~~-~~----~~p----kg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~R~~~l~a~s~~e  143 (321)
                      +.|.+-|.  +..|.|-+. .+    ..|    |..|+++++..+=..  .|.+..|.|.+.... +..+|.++|.|.++
T Consensus        25 ~eR~vFLF--e~~lvfsk~~~~~~~~~~~~Y~yK~~ikls~l~l~e~v--~gd~~kF~i~~~~~~~~~~~~ilqA~s~e~  100 (114)
T cd01232          25 RERRVFLF--EQSIIFAKEVKKKKQFGNPKYIYKSKLQVSKMGLTEHV--EGDPCRFALWSGDPPISDNRIILKANSQET  100 (114)
T ss_pred             ceeEEEEe--eceEEEEEEeccCCCCCceeEEEecceeeeeeEeEEcc--CCCCceEEEEeCCCCCCceEEEEECCCHHH
Confidence            45667776  667766665 22    233    578888888553222  356667776544332 34788999999999


Q ss_pred             HHHHHHHHHhh
Q psy9639         144 IMNWYHAIRNA  154 (321)
Q Consensus       144 ~~~W~~aLr~a  154 (321)
                      ...|+..|+..
T Consensus       101 K~~W~~~I~~i  111 (114)
T cd01232         101 KQEWVKKIREI  111 (114)
T ss_pred             HHHHHHHHHHH
Confidence            99999999854

Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG0932|consensus

Probab=94.16  E-value=0.024  Score=55.49  Aligned_cols=93  Identities=16%  Similarity=0.253  Sum_probs=61.2

Q ss_pred             ccceeeEEEeecC------C----CCCceeeEEEEeccCCeEEeecCCCC---------CceeEEeccceEEEeccCCCC
Q psy9639          56 TGHMDGFLMKRGK------E----SGKYHPRRFVLNEINDTIKYYVKEKK---------EPKATLRISELNVVIAPSKIE  116 (321)
Q Consensus        56 ~~~~~G~L~K~g~------~----~~~wk~R~fvL~~~~~~L~Yy~~~~~---------~pkg~I~l~~~~~~~~~~~~~  116 (321)
                      ...+.|+|..+-.      .    ..+||.=|-||+   |.+.||.++.-         ..+-.|.|-+.-++-++.-..
T Consensus       505 ~~Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~Lk---G~vLYlqkDey~p~kalse~~lknavsvHHALAt~AtdY~K  581 (774)
T KOG0932|consen  505 ATYKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLK---GMVLYLQKDEYKPGKALSESDLKNAVSVHHALATPATDYSK  581 (774)
T ss_pred             hhhhhhhhhhhhhccccCCcCCccchhHHHHHHHHh---hheEEeeccccCcccchhhhhhhhhhhhhhhhcCCCccccc
Confidence            4578899886421      1    246998888996   67777766111         233344444443333454455


Q ss_pred             CCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         117 HPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       117 ~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      ++|-|++.   ....|.|.|+|.+.++|..|+..|.-.
T Consensus       582 Kp~Vf~lr---tAdwrv~LFQaps~eEmqsWi~rIN~v  616 (774)
T KOG0932|consen  582 KPHVFKLR---TADWRVFLFQAPSQEEMQSWIERINLV  616 (774)
T ss_pred             CCceEEEE---eccceeEEEeCCCHHHHHHHHHHHHHH
Confidence            77877764   234499999999999999999988644

>KOG4807|consensus

Probab=93.74  E-value=0.00091  Score=62.24  Aligned_cols=79  Identities=27%  Similarity=0.532  Sum_probs=64.1

Q ss_pred             CCcceEEEEEeCCeeEeeeCCCC---CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEEEEcCCHHHHHH
Q psy9639         194 DAYRKRWFTLDYRKLMYHEEPLS---AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQ  270 (321)
Q Consensus       194 ~~WkkRwfvL~~~~L~Yyk~~~~---~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~  270 (321)
                      ..|++-||+|.+..+.||.+...   ....|.|+|.+|+.+..+..       ...+.|.|.+.+-+|.|.|-+..-...
T Consensus        33 ~~~~k~~~~~~~~~~~~~~d~~A~~~~~L~~~~~LR~C~~v~e~a~-------q~nY~~~i~~~~~~~tL~~~~s~Ir~~  105 (593)
T KOG4807|consen   33 SQWKKHWFVLTDSSLKYYRDSTAEEADELDGEIDLRSCTDVTEYAV-------QRNYGFQIHTKDAVYTLSAMTSGIRRN  105 (593)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHhcccCCccccHHHHHHHHHHHH-------HhccceeecccchhhhhHHHHHHHHHH
Confidence            47999999999999999987633   24578999988765432211       356889999999999999999999999


Q ss_pred             HHHHHhhcc
Q psy9639         271 WIQAVQTGF  279 (321)
Q Consensus       271 Wv~aL~~ai  279 (321)
                      |+.|+.+.+
T Consensus       106 ~~~A~~kT~  114 (593)
T KOG4807|consen  106 WIEALRKTV  114 (593)
T ss_pred             HHHHHHhcc
Confidence            999999854

>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain

Probab=93.68  E-value=0.29  Score=37.28  Aligned_cols=80  Identities=18%  Similarity=0.340  Sum_probs=50.8

Q ss_pred             CCceeeEEEEecc--CCeEEeecC---CCCCceeEEeccceEEEeccC---CCCCCceeEEEEeecCceEEEEEEeCChH
Q psy9639          71 GKYHPRRFVLNEI--NDTIKYYVK---EKKEPKATLRISELNVVIAPS---KIEHPHSLQLTFMKDGSTRHIYVYHEESQ  142 (321)
Q Consensus        71 ~~wk~R~fvL~~~--~~~L~Yy~~---~~~~pkg~I~l~~~~~~~~~~---~~~~~~~~~i~~~~~~~~R~~~l~a~s~~  142 (321)
                      ..|.|...+|...  +..|.+|..   +...||-.|....+..+....   -..+.|-|.+  ..+++ --|.|-|.|++
T Consensus        19 ~~WqkcRl~L~~~~gg~~le~~~~~pPKssrpk~~v~C~~I~EvR~tt~LEmPD~~nTFvL--K~~~~-~eyI~Ea~d~~   95 (107)
T cd01231          19 ARWQRGRLVLRKAVGGYMLEFYLPLPPKSSKPKLQVACSSISEVRECTRLEMPDNLYTFVL--KVDDN-TDIIFEVGDEQ   95 (107)
T ss_pred             cccceeeEEEEecCCCceEEEEccCCCCCCCCccccchhhhhhhhhcccccccCcccEEEE--EecCC-ceEEEEcCCHH
Confidence            4699988888653  345554443   667788777666554332211   1234455544  23332 35888999999


Q ss_pred             HHHHHHHHHHh
Q psy9639         143 SIMNWYHAIRN  153 (321)
Q Consensus       143 e~~~W~~aLr~  153 (321)
                      ++..|+..||.
T Consensus        96 q~~SWla~Ir~  106 (107)
T cd01231          96 QLNSWLAELRY  106 (107)
T ss_pred             HHHHHHHHHhc
Confidence            99999999974

LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.

>PF15408 PH_7: Pleckstrin homology domain

Probab=92.98  E-value=0.096  Score=38.56  Aligned_cols=89  Identities=17%  Similarity=0.370  Sum_probs=51.7

Q ss_pred             eeEEEeecCCCCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEeccC---CCCCCc-eeEE-EE-eecCceEE
Q psy9639          60 DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPS---KIEHPH-SLQL-TF-MKDGSTRH  133 (321)
Q Consensus        60 ~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~~---~~~~~~-~~~i-~~-~~~~~~R~  133 (321)
                      ||||.....  +.-+||+.+|+  +..|-+|.++...-..+..|...... +|-   +...+| |+.- -| +...+.|.
T Consensus         1 EGYLY~~E~--~si~rRF~~L~--~K~~~~~~~KGG~~L~sF~L~~s~~s-~Pm~~~~~A~~N~Gi~A~G~L~~~~~~~~   75 (104)
T PF15408_consen    1 EGYLYRDED--SSIQRRFVMLR--SKQFNMYEDKGGQYLCSFQLSSSVVS-HPMVNFSQAVPNLGINAFGFLMYSPSRRH   75 (104)
T ss_pred             CCeEEEecc--chHHHHHHhhh--hceeEEecccCCceeeeeehhhhhhh-cccccccccCCCCCeeEEEEEEecCCcch
Confidence            578876542  45778888998  77777777732223344444432111 111   111223 3321 11 22334478


Q ss_pred             EEEEeCChHHHHHHHHHHHh
Q psy9639         134 IYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       134 ~~l~a~s~~e~~~W~~aLr~  153 (321)
                      +-+.|+|.+.+..|++++..
T Consensus        76 ~~~FA~S~~~~~~Wi~~mN~   95 (104)
T PF15408_consen   76 VQCFASSKKVCQSWIQVMNS   95 (104)
T ss_pred             hhhhhhHHHHHHHHHHHhcC
Confidence            88889999999999999853

>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A

Probab=91.87  E-value=1.1  Score=36.51  Aligned_cols=33  Identities=15%  Similarity=0.027  Sum_probs=12.7

Q ss_pred             ceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeC
Q psy9639         180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEE  213 (321)
Q Consensus       180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~  213 (321)
                      +.+|-|.+++... ..|-.=.+.|-++.|..-|.
T Consensus         2 i~~G~L~Rk~~~~-~~~~di~~~LFDh~Lll~K~   34 (135)
T PF15405_consen    2 IYKGDLKRKGDNS-FNWVDIHVYLFDHYLLLTKP   34 (135)
T ss_dssp             ----------------S-EEEEEEESSEEEEEEE
T ss_pred             ccccccccccccc-cccceeEEEeeccEEEEEEE
Confidence            5678888888776 57878778888887776654

>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain

Probab=91.64  E-value=1.6  Score=35.48  Aligned_cols=28  Identities=14%  Similarity=0.541  Sum_probs=20.8

Q ss_pred             CceEEEEecCCHHHHHHHHHHHHHhhcC
Q psy9639         286 PQRWYQFSALSAPDRDQWIQAVQTVLDT  313 (321)
Q Consensus       286 ~~~~~~l~a~s~~e~~~Wi~al~~~i~~  313 (321)
                      |.++|+|||-+++.+.+.++.|+.+|.+
T Consensus       129 pE~vfqLCcS~~E~k~~flK~Irsilre  156 (160)
T cd01255         129 PEKVFVLCCSTAESRNAFLKTIRSILRE  156 (160)
T ss_pred             CcceEEEecCCHHHHHHHHHHHHHHHHH
Confidence            5556668888888888888888877653

TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.

>KOG1738|consensus

Probab=91.17  E-value=0.036  Score=55.01  Aligned_cols=63  Identities=17%  Similarity=0.384  Sum_probs=51.5

Q ss_pred             ccceeeEEEeecCCC---CCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCce
Q psy9639          56 TGHMDGFLMKRGKES---GKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHS  120 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~---~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~  120 (321)
                      .|..+|||++++...   ..|++=||||.  ++.|..|.+ .++.+.++|.|...+...+.+..++++-
T Consensus       561 ~G~~qg~~~r~k~~~~~~~kW~k~~~~l~--~~~l~~y~n~~~~~~e~~i~l~~~~i~~a~e~~~~~~~  627 (638)
T KOG1738|consen  561 RGDRQGWLTRLKLNHLTQEKWRKIWMVLN--DDPLLNYRNHRVRAAESVIKLPLFTISVAEEVLGKPEL  627 (638)
T ss_pred             cchhhccchhhccchHHHHHhhhheeeec--CchhhhhhhhhhhchhheeeccchhhhhHHHhccCHhh
Confidence            578899999988663   45999999999  999999999 9999999999998866666655555543

>PF15411 PH_10: Pleckstrin homology domain

Probab=90.57  E-value=2.3  Score=33.61  Aligned_cols=78  Identities=17%  Similarity=0.220  Sum_probs=56.5

Q ss_pred             CCceeeEEEEeccCCeEEeecC-CC-------------------CCceeEEeccceEEEeccCCCCCCceeEEEEeecCc
Q psy9639          71 GKYHPRRFVLNEINDTIKYYVK-EK-------------------KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGS  130 (321)
Q Consensus        71 ~~wk~R~fvL~~~~~~L~Yy~~-~~-------------------~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~  130 (321)
                      ..|+...+-|.  +..|..++. ..                   -..||.|-|.++..+..... ...+.++|....+..
T Consensus        19 ~~erE~~vYLF--e~illc~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~i~~v~~~s~-~g~~~L~i~w~~d~e   95 (116)
T PF15411_consen   19 DSEREYEVYLF--EKILLCCKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISNITEVSSSSK-PGSYSLQISWKGDPE   95 (116)
T ss_pred             Ccceeeeeeee--eeeEEEEecCccCccchhhcccccccCCCceEEEeeEEEEEeeeeeeccCC-CCceEEEEEEcCCCC
Confidence            55888888887  677777765 11                   13478899998866554432 345778887755555


Q ss_pred             eEEEEEEeCChHHHHHHHHHH
Q psy9639         131 TRHIYVYHEESQSIMNWYHAI  151 (321)
Q Consensus       131 ~R~~~l~a~s~~e~~~W~~aL  151 (321)
                      .-++.++-.+++++..|-.+|
T Consensus        96 ~~~F~lrf~nee~l~~W~~~L  116 (116)
T PF15411_consen   96 LENFTLRFRNEEQLEQWRSAL  116 (116)
T ss_pred             CceEEEEeCCHHHHHHHHhhC
Confidence            678999999999999998764

>KOG1451|consensus

Probab=89.97  E-value=0.9  Score=45.09  Aligned_cols=97  Identities=12%  Similarity=0.148  Sum_probs=63.6

Q ss_pred             cccceeeEEEeecC--CCCCceeeEEEEeccCCeEEe--ecC---CCCCceeEEeccceEEEeccCCCCCCceeEEEEee
Q psy9639          55 ITGHMDGFLMKRGK--ESGKYHPRRFVLNEINDTIKY--YVK---EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMK  127 (321)
Q Consensus        55 ~~~~~~G~L~K~g~--~~~~wk~R~fvL~~~~~~L~Y--y~~---~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~  127 (321)
                      ....++|||+-+-+  ....|-+-||+-..+...+..  +..   .+-.+..++.|..|.. ...+.+.+.+||.+.-. 
T Consensus       263 ~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~qk~g~k~g~~~~~~lKsC~R-RktdSIdKRFCFDve~~-  340 (812)
T KOG1451|consen  263 TPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPANQKTGTKMGQTATFKLKSCSR-RKTDSIDKRFCFDVEVE-  340 (812)
T ss_pred             CCcccceeeeehhhhhccchhhhheeEeecccceEEEeecccCCCCcCCCcceEEehhhcc-Ccccccccceeeeeeec-
Confidence            45689999997654  357899999999842222221  111   2334445566666632 23446778888887533 


Q ss_pred             cCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         128 DGSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       128 ~~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                       ...-++-++|-|++++..|++|+-.+
T Consensus       341 -erpgviTmQALSE~drrlWmeAMDG~  366 (812)
T KOG1451|consen  341 -ERPGVITMQALSEKDRRLWMEAMDGA  366 (812)
T ss_pred             -ccCCeeehHhhhhhHHHHHHHHhcCC
Confidence             23356889999999999999998544

>cd01223 PH_Vav Vav pleckstrin homology (PH) domain

Probab=88.79  E-value=5.4  Score=31.46  Aligned_cols=92  Identities=16%  Similarity=0.215  Sum_probs=54.6

Q ss_pred             eeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCC------CceeEEeccceEEEecc--CCCC----CCceeEEEEe
Q psy9639          60 DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKK------EPKATLRISELNVVIAP--SKIE----HPHSLQLTFM  126 (321)
Q Consensus        60 ~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~------~pkg~I~l~~~~~~~~~--~~~~----~~~~~~i~~~  126 (321)
                      .|-|.-+......=+.|+.-|.  +..|..=+. .+.      ..|..+.|.+..++..+  ...+    ..|+|-|.- 
T Consensus         7 DGelk~k~~~~~k~k~RyiFLF--Dk~lI~CK~~~~~~~~~~Y~~Ke~~~l~~~~I~~~~~~d~~~~~~~~~~~f~L~~-   83 (116)
T cd01223           7 DGEVRIKASEDQKTKLRYIFLF--DKAVIVCKALGDNTGDMQYTYKDIHDLADYKIENNPSRDTEGRDTRWKYGFYLAH-   83 (116)
T ss_pred             CCceEEeEeccCCCceeEEEEe--cceEEEEEecCCCCCCccEEhHHhhhhheeeeEecCccCcccCCcceEEEEEEEe-
Confidence            3444444433344568998887  677766565 332      44667777776554332  1222    234444431 


Q ss_pred             ecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         127 KDGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       127 ~~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      .++ .-.+-|++.++++...|+.+|..|.
T Consensus        84 ~~~-~~~~~f~~Ktee~K~kWm~al~~a~  111 (116)
T cd01223          84 KQG-KTGFTFYFKTEHLRKKWLKALEMAM  111 (116)
T ss_pred             cCC-CccEEEEeCCHHHHHHHHHHHHHHH
Confidence            222 2448899999999999999987653

Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG0705|consensus

Probab=88.61  E-value=0.41  Score=47.30  Aligned_cols=38  Identities=26%  Similarity=0.503  Sum_probs=32.8

Q ss_pred             CceEEEEeC-CeEEEEEcCCHHHHHHHHHHHhhcccccc
Q psy9639         246 GFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQTGFTFTL  283 (321)
Q Consensus       246 ~~~F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~ai~~~l  283 (321)
                      .+||.|+.. +.++.|.|-+-+|++.||+||+.-|...|
T Consensus       445 de~F~IVs~tgqtWhFeAtt~EERdaWvQai~sqIlaSl  483 (749)
T KOG0705|consen  445 DECFEIVSNTGQTWHFEATTYEERDAWVQAIQSQILASL  483 (749)
T ss_pred             cceEEEeccccchhhhhhcchhhHHHHHHHHHHHHHHHH
Confidence            469999965 78999999999999999999999885443

>KOG1738|consensus

Probab=88.61  E-value=0.063  Score=53.34  Aligned_cols=47  Identities=23%  Similarity=0.410  Sum_probs=40.2

Q ss_pred             ceEEEEEEeCCC--CCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcc
Q psy9639         180 GREGWLWKTGPK--NADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLG  226 (321)
Q Consensus       180 ~k~G~L~K~g~~--~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~  226 (321)
                      ..+|||++.+..  ....|++-||+|.+..|+.|.++.+..+.++|.|.
T Consensus       563 ~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~~~~~~e~~i~l~  611 (638)
T KOG1738|consen  563 DRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNHRVRAAESVIKLP  611 (638)
T ss_pred             hhhccchhhccchHHHHHhhhheeeecCchhhhhhhhhhhchhheeecc
Confidence            568999876543  24579999999999999999999999999999984

>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain

Probab=87.00  E-value=6.5  Score=31.85  Aligned_cols=77  Identities=14%  Similarity=0.308  Sum_probs=50.9

Q ss_pred             eeeEEEEeccCCeEEeecC-CC-----CCc----eeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEEeCChHH
Q psy9639          74 HPRRFVLNEINDTIKYYVK-EK-----KEP----KATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQS  143 (321)
Q Consensus        74 k~R~fvL~~~~~~L~Yy~~-~~-----~~p----kg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e  143 (321)
                      +.|..-|.  +..+..=+. .+     ..|    |..|.++++..+  ....|.+..|.|.+.  ++...|.++|.|.+.
T Consensus        30 ~eRhVFLF--E~~viF~K~~~~~~~~~~~p~Y~yK~~ikls~lglt--e~v~gd~~kFeiw~~--~~~~~yilqA~t~e~  103 (133)
T cd01227          30 MQRHIFLH--EKAVLFCKKREENGEGEKAPSYSFKQSLKMTAVGIT--ENVKGDTKKFEIWYN--AREEVYILQAPTPEI  103 (133)
T ss_pred             ceeEEEEe--cceEEEEEEeccCCCCCcceeEEEeeeEEeeccccc--ccCCCCccEEEEEeC--CCCcEEEEEcCCHHH
Confidence            35777776  555555443 21     223    678888777442  222355667877654  345789999999999


Q ss_pred             HHHHHHHHHhhhh
Q psy9639         144 IMNWYHAIRNAKF  156 (321)
Q Consensus       144 ~~~W~~aLr~a~~  156 (321)
                      ...|+..|+..-.
T Consensus       104 K~~Wv~~I~~iL~  116 (133)
T cd01227         104 KAAWVNEIRKVLT  116 (133)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999986643

Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG0592|consensus

Probab=86.54  E-value=0.51  Score=46.61  Aligned_cols=85  Identities=29%  Similarity=0.372  Sum_probs=60.6

Q ss_pred             cceEEEEEEeCCCCCCCcceEEEEEe-CCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeE
Q psy9639         179 FGREGWLWKTGPKNADAYRKRWFTLD-YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRW  257 (321)
Q Consensus       179 ~~k~G~L~K~g~~~~~~WkkRwfvL~-~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~  257 (321)
                      +.+.|.|.|+.+..   =++|.|+|+ +..|.|+. +.....+|.|++..+   +.+..       .....|-|.||.|+
T Consensus       451 i~k~~~l~k~~~lf---~rkr~lllTn~~rll~~~-~~~~~lk~eip~~~~---~~~e~-------~n~~~~~i~TP~k~  516 (604)
T KOG0592|consen  451 ILKEGALEKRQGLF---ARKRMLLLTNGPRLLYVD-PQNLVLKGEIPWSPD---LRVEL-------KNSSTFFIHTPNKV  516 (604)
T ss_pred             HHhHHHHHhhhhhh---hceeEEEecCCCeEEEEe-cccceeccccccCcc---cceee-------ccCcceEEECCccc
Confidence            45778887775443   367999998 66777776 555578899999763   22222       23346999999999


Q ss_pred             EEEEcCCHHHHHHHHHHHhhc
Q psy9639         258 YQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       258 ~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      |+|-- -+.....|..||.+.
T Consensus       517 ~~l~d-~~~~as~w~~ai~~~  536 (604)
T KOG0592|consen  517 YYLED-PEQRASVWCKAIETV  536 (604)
T ss_pred             eeccC-cccchhHHHHhhhhh
Confidence            99765 556778999999886

>PF15411 PH_10: Pleckstrin homology domain

Probab=85.64  E-value=5.6  Score=31.39  Aligned_cols=75  Identities=19%  Similarity=0.290  Sum_probs=48.6

Q ss_pred             CCcceEEEEEeCCeeEeeeCCCCC-------------------CcceeEEcccccCceEEecCCCCCCCCCCceEEEEe-
Q psy9639         194 DAYRKRWFTLDYRKLMYHEEPLSA-------------------YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT-  253 (321)
Q Consensus       194 ~~WkkRwfvL~~~~L~Yyk~~~~~-------------------~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t-  253 (321)
                      ..|+...+-|-...|.+.+.....                   ..+|.|.+.++.+   |..   .+ ....+.++|.- 
T Consensus        19 ~~erE~~vYLFe~illc~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~i~~---v~~---~s-~~g~~~L~i~w~   91 (116)
T PF15411_consen   19 DSEREYEVYLFEKILLCCKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISNITE---VSS---SS-KPGSYSLQISWK   91 (116)
T ss_pred             CcceeeeeeeeeeeEEEEecCccCccchhhcccccccCCCceEEEeeEEEEEeeee---eec---cC-CCCceEEEEEEc
Confidence            579999999999998888753211                   1368888876533   322   11 13456788874 


Q ss_pred             --C-CeEEEEEcCCHHHHHHHHHHH
Q psy9639         254 --P-QRWYQFSALSAPDRDQWIQAV  275 (321)
Q Consensus       254 --~-~r~~~f~A~s~~e~~~Wv~aL  275 (321)
                        + .-.|.|.-.++++|+.|-.+|
T Consensus        92 ~d~e~~~F~lrf~nee~l~~W~~~L  116 (116)
T PF15411_consen   92 GDPELENFTLRFRNEEQLEQWRSAL  116 (116)
T ss_pred             CCCCCceEEEEeCCHHHHHHHHhhC
Confidence              2 268887777777777776654

>KOG2070|consensus

Probab=85.42  E-value=1.4  Score=42.85  Aligned_cols=75  Identities=15%  Similarity=0.247  Sum_probs=51.3

Q ss_pred             cceEEEEEeCCeeEeeeCCCCC---CcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC--CeEEEEEcCCHHHHHH
Q psy9639         196 YRKRWFTLDYRKLMYHEEPLSA---YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP--QRWYQFSALSAPDRDQ  270 (321)
Q Consensus       196 WkkRwfvL~~~~L~Yyk~~~~~---~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~--~r~~~f~A~s~~e~~~  270 (321)
                      =+.|||+|-.+.|.++.-..+.   .-.|-+++    .|..|...+  ++....+.|+|..+  +| ....+..+.+.+.
T Consensus       325 ~~dRy~~LF~~~llflsvs~rMs~fIyegKlp~----tG~iV~klE--dte~~~nafeis~~ti~r-Iv~~c~~~~~l~~  397 (661)
T KOG2070|consen  325 EKDRYLLLFPNVLLFLSVSPRMSGFIYEGKLPT----TGMIVTKLE--DTENHRNAFEISGSTIER-IVVSCNNQQDLQE  397 (661)
T ss_pred             hhhheeeeccceeeeeEeccccchhhhcccccc----ceeEEeehh--hhhcccccccccccchhh-eeeccCChHHHHH
Confidence            4589999999999888755432   23566777    456666533  33456678999865  45 4556777888888


Q ss_pred             HHHHHhh
Q psy9639         271 WIQAVQT  277 (321)
Q Consensus       271 Wv~aL~~  277 (321)
                      |+++|+.
T Consensus       398 wve~ln~  404 (661)
T KOG2070|consen  398 WVEHLNK  404 (661)
T ss_pred             HHHHhhh
Confidence            8888875

>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A

Probab=84.35  E-value=13  Score=30.11  Aligned_cols=94  Identities=16%  Similarity=0.213  Sum_probs=39.6

Q ss_pred             eeeEEEeecCCCCCceeeEEEEeccCCeEEeecC--CCC-----CceeEEeccceEEEe---------------------
Q psy9639          59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK--EKK-----EPKATLRISELNVVI---------------------  110 (321)
Q Consensus        59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~--~~~-----~pkg~I~l~~~~~~~---------------------  110 (321)
                      .+|=|.++|.....|-.=.+.|.  |+.|..=+.  ..+     ..+.-|+|.-+....                     
T Consensus         3 ~~G~L~Rk~~~~~~~~di~~~LF--Dh~Lll~K~k~~~k~e~ykV~r~PIPLeLL~l~~~~d~~~~~~~~~r~s~s~~~~   80 (135)
T PF15405_consen    3 YKGDLKRKGDNSFNWVDIHVYLF--DHYLLLTKPKKVNKREQYKVYRRPIPLELLVLESMDDPPPQRSIAKRPSSSLISS   80 (135)
T ss_dssp             --------------S-EEEEEEE--SSEEEEEEEEEETTEEEEEESS--EEGGG-EEEE--TTTS---------S-----
T ss_pred             cccccccccccccccceeEEEee--ccEEEEEEEEecCCeEEEEEEECCcCHHHeeeecccCCCcccCcccccccCccCC
Confidence            56888888888777877777776  666654433  111     111233333321110                     


Q ss_pred             c---------cCCCCCCceeEEEEeecC-ceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         111 A---------PSKIEHPHSLQLTFMKDG-STRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       111 ~---------~~~~~~~~~~~i~~~~~~-~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      .         +.......++.|+|.--| ....|-|+|+|+.++.+|++.|..+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~q  134 (135)
T PF15405_consen   81 SSSNSNSPSNPNSSDSKSLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEEQ  134 (135)
T ss_dssp             --SHHHH--------TSSEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHHH
T ss_pred             ccCCCCccceeeeccCCCccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHhc
Confidence            0         001123456677665544 3466899999999999999998754

>KOG1170|consensus

Probab=84.16  E-value=0.059  Score=54.92  Aligned_cols=92  Identities=14%  Similarity=0.129  Sum_probs=61.6

Q ss_pred             ceEEEEEEeCCCCCCCcceEEEEEeCCe-eEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEE
Q psy9639         180 GREGWLWKTGPKNADAYRKRWFTLDYRK-LMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWY  258 (321)
Q Consensus       180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~-L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~  258 (321)
                      ++.|...+..... ..|+.|++.+++.. +.|-+...... --.+.+..    .+|.+   .++...++.|.|+++-|+.
T Consensus         3 ~~rgl~~~~~ne~-Ea~k~r~~~~k~~~~~~vakTa~g~~-~~~~d~t~----a~~~e---Ss~~n~~~sf~vi~~~rk~   73 (1099)
T KOG1170|consen    3 VTRGLDNDVDNER-EAWKQSILRAKDRMPEKVAKTASGPL-FALLDLTS----AHVAE---SSTNNPRPSFCVITPVRKH   73 (1099)
T ss_pred             cccccccccccHH-HHHHHHHHHHHHHHHHHHHhccCCcc-HHHHhccc----ccccc---cccCCCCCCeeEecccHHh
Confidence            4556666665555 68999999999887 44444443311 11222322    12222   2233456789999999999


Q ss_pred             EEEcCCHHHHHHHHHHHhhccc
Q psy9639         259 QFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       259 ~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      .++|++..+|..|+.++++-..
T Consensus        74 r~~adn~ke~e~wi~~~kt~q~   95 (1099)
T KOG1170|consen   74 RLCADNRKEMEKWINQSKTPQH   95 (1099)
T ss_pred             hhhccchhHHHHhhccccchhh
Confidence            9999999999999999998653

>KOG0517|consensus

Probab=83.93  E-value=0.052  Score=59.65  Aligned_cols=128  Identities=16%  Similarity=0.297  Sum_probs=88.7

Q ss_pred             ceEEEEEEeC-------CCCCCCcceEEEEEeCCeeEeeeCCCCCCc------ceeEEcccccCceEEecCCCCCCCCCC
Q psy9639         180 GREGWLWKTG-------PKNADAYRKRWFTLDYRKLMYHEEPLSAYP------KGEIFLGHCSDGYTVRLGVPPGAKDQG  246 (321)
Q Consensus       180 ~k~G~L~K~g-------~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~------~g~i~L~~~~~~~~V~~~~~~~~~~~~  246 (321)
                      ..+|+|+.+-       ...++.|..-||++..+.|.+|++......      .|..+|.-.  .+.|....  ....++
T Consensus      2300 ~~eG~L~Rk~~~~A~e~k~~nRsw~~vy~~i~e~el~fykD~k~~~a~ve~~~r~e~~lel~--~a~i~~a~--dy~kkk 2375 (2473)
T KOG0517|consen 2300 QLEGFLYRKHLLGALEIKASNRSWDNVYCRIREKELGFYKDAKKDLASVELLVRGEPPLELD--MAAIEVAS--DYHKKK 2375 (2473)
T ss_pred             HHHhHHHHHHHHhhhhhhhhcccHHHHHHHHHhccchhhcccCcccccchhhccCCcchhcc--hhHHHHHH--HHHHHh
Confidence            4577775321       112478999999999999999998754322      233333221  11121111  112356


Q ss_pred             ceEEEEe-CCeEEEEEcCCHHHHHHHHHHHhhccccccccCceEEEEecCCHHHHHHHHHHHHHhhcCCCCCCC
Q psy9639         247 FTFTLKT-PQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVLDTPLTPQD  319 (321)
Q Consensus       247 ~~F~i~t-~~r~~~f~A~s~~e~~~Wv~aL~~ai~~~l~~~~~~~~l~a~s~~e~~~Wi~al~~~i~~~l~~~~  319 (321)
                      +.|.+.. ++.-|.|+|.++++|+.|+.++...+...+.       + .+..++...|..+..+-.++.++|..
T Consensus      2376 ~v~~l~~~~gae~llq~k~ee~m~sWL~~~a~~~~~~lk-------~-~~~~~e~~~~a~~~~a~~~~t~pp~~ 2441 (2473)
T KOG0517|consen 2376 HVFLLQLPPGAEHLLQAKDEEEMESWLRALAVKRAEALK-------L-SDDVKELEVWANAVRASMSQTLPPSS 2441 (2473)
T ss_pred             HhhhhcCCchHHHHHhhccHHHHHHHHHHHHHHHHHHhh-------h-hhhHHHhhhhHHHHHHHhhcCCCCCC
Confidence            8898885 5799999999999999999999998876552       2 36678888999999999999888854

>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function

Probab=83.40  E-value=10  Score=29.54  Aligned_cols=32  Identities=31%  Similarity=0.472  Sum_probs=19.6

Q ss_pred             CCceEEEEeCCeEEEEEcCCHHHHHHHHHHHh
Q psy9639         245 QGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ  276 (321)
Q Consensus       245 ~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~  276 (321)
                      ..+.|.|.|..+...|.++|..+.+.|+++|+
T Consensus        69 ~~~yfgL~T~~G~vEfec~~~~~~k~W~~gI~  100 (110)
T PF08458_consen   69 ERRYFGLKTAQGVVEFECDSQREYKRWVQGIQ  100 (110)
T ss_pred             eEEEEEEEecCcEEEEEeCChhhHHHHHHHHH
Confidence            34778888888888844444444444444443

>KOG3523|consensus

Probab=82.08  E-value=4.4  Score=40.61  Aligned_cols=82  Identities=20%  Similarity=0.274  Sum_probs=46.2

Q ss_pred             CcceEEEEEeCCeeEeeeCCCC-------CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe--C----CeEEEEE
Q psy9639         195 AYRKRWFTLDYRKLMYHEEPLS-------AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT--P----QRWYQFS  261 (321)
Q Consensus       195 ~WkkRwfvL~~~~L~Yyk~~~~-------~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t--~----~r~~~f~  261 (321)
                      ..+.-|+.|-++.|..-+....       ..+.+.|.+..+....... ..+......+|.|.+.-  +    .-.|.|+
T Consensus       498 ~~~~vylfLFnD~Llitk~k~~~~f~V~Dya~r~~l~ve~~e~~~~lp-~~~~~~~~~~hlF~ltLl~N~~~~~~e~lL~  576 (695)
T KOG3523|consen  498 LSKTVYLFLFNDLLLITKKKSEGSFQVFDYAPRSLLQVEKCEPELKLP-GGANSLSSRPHLFLLTLLSNHQGRQTELLLS  576 (695)
T ss_pred             ccceeeeeeecceeeEeeecCCCceEEeeccchhhhhhhhcCcccCCC-CCCcccccccceEEEehhhccCCCceeeeec
Confidence            4556688888888777664422       2234444443221000000 00001112346777752  2    2689999


Q ss_pred             cCCHHHHHHHHHHHhh
Q psy9639         262 ALSAPDRDQWIQAVQT  277 (321)
Q Consensus       262 A~s~~e~~~Wv~aL~~  277 (321)
                      |+|..|+++||.||.-
T Consensus       577 a~s~Sd~~RWi~Al~p  592 (695)
T KOG3523|consen  577 AESQSDRQRWISALRP  592 (695)
T ss_pred             CCchHHHHHHHHhcCC
Confidence            9999999999999984

>KOG4807|consensus

Probab=80.35  E-value=0.028  Score=52.64  Aligned_cols=78  Identities=19%  Similarity=0.340  Sum_probs=58.5

Q ss_pred             CCCceeeEEEEeccCCeEEeecC----CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEEeCChHHHH
Q psy9639          70 SGKYHPRRFVLNEINDTIKYYVK----EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIM  145 (321)
Q Consensus        70 ~~~wk~R~fvL~~~~~~L~Yy~~----~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~  145 (321)
                      ...|++-||||.  +..|.||.+    ...+..|.|+|.+|..+.. ......+||+|    .+....|-+.+-+.--..
T Consensus        32 t~~~~k~~~~~~--~~~~~~~~d~~A~~~~~L~~~~~LR~C~~v~e-~a~q~nY~~~i----~~~~~~~tL~~~~s~Ir~  104 (593)
T KOG4807|consen   32 TSQWKKHWFVLT--DSSLKYYRDSTAEEADELDGEIDLRSCTDVTE-YAVQRNYGFQI----HTKDAVYTLSAMTSGIRR  104 (593)
T ss_pred             hHHHHHHHHHHh--HHHHHHHHHHHHHhcccCCccccHHHHHHHHH-HHHHhccceee----cccchhhhhHHHHHHHHH
Confidence            346999999999  899999987    4567789999998854332 12345677766    355566777888888889


Q ss_pred             HHHHHHHhh
Q psy9639         146 NWYHAIRNA  154 (321)
Q Consensus       146 ~W~~aLr~a  154 (321)
                      .|+.+++..
T Consensus       105 ~~~~A~~kT  113 (593)
T KOG4807|consen  105 NWIEALRKT  113 (593)
T ss_pred             HHHHHHHhc
Confidence            999999854

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	321
3fm8_C	392	Crystal Structure Of Full Length Centaurin Alpha-1		3e-72
3feh_A	386	Crystal Structure Of Full Length Centaurin Alpha-1		3e-72
1v5u_A	117	Solution Structure Of The C-Terminal Pleckstrin Hom		1e-04
1wg7_A	150	Solution Structure Of Pleckstrin Homology Domain Fr		2e-04
1u27_A	129	Triglycine Variant Of The Arno Pleckstrin Homology		5e-04

>pdb|3FM8|C Chain C, Crystal Structure Of Full Length Centaurin Alpha-1 Bound With The Fha Domain Of Kif13b (Capri Target) Length = 392

Iteration: 1
 Score =  268 bits (685), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 125/280 (44%), Positives = 195/280 (69%), Gaps = 4/280 (1%)
Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
           M   GN+ ++ ++E +VP+ Y  PT S  Q+L ++WIR+KYER+EF +PE    Y  G+ 
Sbjct: 91  MASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQEPYSAGYR 150
Query: 60  DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHP 118
           +GFL KRG+++G++  R+FVL E    +KY+ + + KEPKA ++I  LN    P+KI HP
Sbjct: 151 EGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHP 210
Query: 119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRD 178
           H LQ+T++KD STR+I++YHE+ + I++W++A+R A+FH LQVAFP A+D++LV  L+R+
Sbjct: 211 HGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLSRN 270
Query: 179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
           + +EG++ KTGPK  + +RKRWFT+D R+LMY ++PL A+ +GE+F+G    GYTV  G 
Sbjct: 271 YLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGF 330
Query: 239 PPGAKDQGF--TFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
           PP  +   +    T+ TP R + F+  +  D+ +W+ A Q
Sbjct: 331 PPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQ 370

>pdb|3FEH|A Chain A, Crystal Structure Of Full Length Centaurin Alpha-1 Length = 386

Iteration: 1
 Score =  268 bits (685), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 125/280 (44%), Positives = 195/280 (69%), Gaps = 4/280 (1%)
Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT-YITGHM 59
           M   GN+ ++ ++E +VP+ Y  PT S  Q+L ++WIR+KYER+EF +PE    Y  G+ 
Sbjct: 89  MASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQEPYSAGYR 148
Query: 60  DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHP 118
           +GFL KRG+++G++  R+FVL E    +KY+ + + KEPKA ++I  LN    P+KI HP
Sbjct: 149 EGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHP 208
Query: 119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRD 178
           H LQ+T++KD STR+I++YHE+ + I++W++A+R A+FH LQVAFP A+D++LV  L+R+
Sbjct: 209 HGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLSRN 268
Query: 179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
           + +EG++ KTGPK  + +RKRWFT+D R+LMY ++PL A+ +GE+F+G    GYTV  G 
Sbjct: 269 YLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGF 328
Query: 239 PPGAKDQGF--TFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
           PP  +   +    T+ TP R + F+  +  D+ +W+ A Q
Sbjct: 329 PPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQ 368

>pdb|1V5U|A Chain A, Solution Structure Of The C-Terminal Pleckstrin Homology Domain Of Sbf1 From Mouse Length = 117

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 182 EGWLWKTGPKNADAYRKRWFTLDYRK--LMYHEEPLSAYPKGEIFLGHCSDGY--TVRLG 237
           EG L+K G      ++ RWF LD  K  L Y++  +    KG I L         T  +G
Sbjct: 11  EGILYKKG-AFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIG 69
Query: 238 VPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT 280
            P    ++ F F +KT +R Y F A   P   QW+  +Q+  +
Sbjct: 70  APKTVDEKAF-FDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLS 111

>pdb|1WG7|A Chain A, Solution Structure Of Pleckstrin Homology Domain From Human Kiaa1058 Protein Length = 150

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 19/104 (18%)
Query: 181 REGWLWKTGPKNA-----DAYRKRWFTL------DYRKLMYHEEPLSAYPKGEIFLGHCS 229
           + GWL+K    +A      ++++R+F L       Y    Y +E +S  PKG IFL  C 
Sbjct: 20  KHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSC- 78
Query: 230 DGYTVRLGVPPGAKDQGFTFTLKTPQR-WYQFSALSAPDRDQWI 272
                 +GV    K + F F LK   +  Y  +A S  + ++WI
Sbjct: 79  ------MGVVQNNKVRRFAFELKMQDKSSYLLAADSEVEMEEWI 116

>pdb|1U27|A Chain A, Triglycine Variant Of The Arno Pleckstrin Homology Domain In Complex With Ins(1,3,4,5)p4 Length = 129

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           REGWL K G      +++RWF L    L Y E      P+G I L + S    +R     
Sbjct: 13  REGWLLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLS----IR----- 63
Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT-GFTFTLKTPQRWYQFSALSAPD 299
                     +  P++   F      ++ Q I+A +T      ++     Y+ SA +  +
Sbjct: 64  ---------EVDDPRKPNCFELYIPNNKGQLIKACKTEADGRVVEGNHMVYRISAPTQEE 114
Query: 300 RDQWIQAVQTVL 311
           +D+WI+++Q  +
Sbjct: 115 KDEWIKSIQAAV 126

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	321
3lju_X	386	ARF-GAP with dual PH domain-containing protein 1;	4e-91
2cod_A	115	Centaurin-delta 1; ARF GAP and RHO GAP with ankyri	2e-25
1v5u_A	117	SBF1, SET binding factor 1; MTMR5, the pleckstrin	2e-22
1v5u_A	117	SBF1, SET binding factor 1; MTMR5, the pleckstrin	9e-06
1eaz_A	125	Tandem PH domain containing protein-1; lipid-bindi	5e-21
1eaz_A	125	Tandem PH domain containing protein-1; lipid-bindi	5e-04
2d9y_A	117	Pleckstrin homology domain-containing protein fami	1e-20
2d9y_A	117	Pleckstrin homology domain-containing protein fami	2e-05
2dhk_A	119	TBC1 domain family member 2; PH domain, paris-1, s	2e-20
1upq_A	123	PEPP1; PH domain, phosphoinositide binding, signal	3e-20
1upq_A	123	PEPP1; PH domain, phosphoinositide binding, signal	3e-05
2yry_A	122	Pleckstrin homology domain-containing family A mem	7e-20
2yry_A	122	Pleckstrin homology domain-containing family A mem	9e-05
1fao_A	126	Dual adaptor of phosphotyrosine and 3- phosphoinos	7e-20
1fao_A	126	Dual adaptor of phosphotyrosine and 3- phosphoinos	3e-05
3tfm_A	228	Myosin X; split PH domain, motor protein; 2.53A {R	2e-19
3tfm_A	228	Myosin X; split PH domain, motor protein; 2.53A {R	2e-04
1v5p_A	126	Pleckstrin homology domain-containing, family A; T	7e-19
1v5p_A	126	Pleckstrin homology domain-containing, family A; T	1e-04
2dn6_A	115	KIAA0640 protein; PH domain, structural genomics,	7e-19
2dn6_A	115	KIAA0640 protein; PH domain, structural genomics,	2e-06
2dkp_A	128	Pleckstrin homology domain-containing family A mem	8e-19
2dkp_A	128	Pleckstrin homology domain-containing family A mem	2e-05
1x1f_A	149	Signal-transducing adaptor protein 1; docking prot	1e-18
1u5e_A	211	SRC-associated adaptor protein; novel dimerization	7e-18
1u5d_A	108	SKAP55, SRC kinase-associated phosphoprotein of 55	8e-18
1wg7_A	150	Dedicator of cytokinesis protein 9; pleckstrin hom	1e-17
1u5f_A	148	SRC-associated adaptor protein; PH domain of SKAP-	3e-17
1v89_A	118	Hypothetical protein KIAA0053; pleckstrin homology	6e-17
1v89_A	118	Hypothetical protein KIAA0053; pleckstrin homology	3e-05
2i5f_A	109	Pleckstrin; PH domain, protein-inositol phosphate	1e-16
2i5f_A	109	Pleckstrin; PH domain, protein-inositol phosphate	2e-06
1fgy_A	127	GRP1; PH domain, signaling protein; HET: 4IP; 1.50	1e-16
1wgq_A	109	FYVE, rhogef and PH domain containing 6; ethanol d	2e-16
1wgq_A	109	FYVE, rhogef and PH domain containing 6; ethanol d	4e-07
2da0_A	114	130-kDa phosphatidylinositol 4,5-biphosphate- depe	2e-16
2da0_A	114	130-kDa phosphatidylinositol 4,5-biphosphate- depe	1e-07
1pls_A	113	Pleckstrin homology domain; phosphorylation; NMR {	5e-16
1pls_A	113	Pleckstrin homology domain; phosphorylation; NMR {	8e-07
1x05_A	129	Pleckstrin; PH domain, structural genomics, NPPSFA	1e-15
1x05_A	129	Pleckstrin; PH domain, structural genomics, NPPSFA	2e-06
2rsg_A	94	Collagen type IV alpha-3-binding protein; pleckstr	2e-15
2rsg_A	94	Collagen type IV alpha-3-binding protein; pleckstr	8e-05
2lul_A	164	Tyrosine-protein kinase TEC; structural genomics,	7e-15
1x1g_A	129	Pleckstrin 2; PH domain, structural genomics, rike	7e-15
1x1g_A	129	Pleckstrin 2; PH domain, structural genomics, rike	8e-06
3aj4_A	112	Pleckstrin homology domain-containing family B ME;	9e-15
3aj4_A	112	Pleckstrin homology domain-containing family B ME;	2e-04
3cxb_B	112	Pleckstrin homology domain-containing family M mem	2e-14
3cxb_B	112	Pleckstrin homology domain-containing family M mem	7e-06
2d9v_A	130	Pleckstrin homology domain-containing protein fami	2e-13
2d9v_A	130	Pleckstrin homology domain-containing protein fami	2e-04
2cof_A	107	Protein KIAA1914; PH domain, structural genomics,	5e-12
1v88_A	130	Oxysterol binding protein-related protein 8; vesic	2e-11
1wi1_A	126	Calcium-dependent activator protein for secretion,	3e-11
3rcp_A	103	Pleckstrin homology domain-containing family A ME;	3e-11
2coc_A	112	FYVE, rhogef and PH domain containing protein 3; s	7e-11
2rlo_A	128	Centaurin-gamma 1; split PH domain, alternative sp	2e-10
2d9x_A	120	Oxysterol binding protein-related protein 11; PH d	2e-10
2d9x_A	120	Oxysterol binding protein-related protein 11; PH d	2e-05
2y7b_A	134	Actin-binding protein anillin; cell cycle; 1.90A {	3e-10
1btk_A	169	Bruton'S tyrosine kinase; transferase, PH domain,	1e-09
2olm_A	140	Nucleoporin-like protein RIP; arfgap, GTPase-activ	1e-09
2iqj_A	134	Stromal membrane-associated protein 1-like; zinc,	1e-09
2crr_A	141	Stromal membrane-associated protein SMAP1B; arfgap	2e-09
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-09
1unq_A	125	RAC-alpha serine/threonine kinase; transferase, pl	3e-09
1unq_A	125	RAC-alpha serine/threonine kinase; transferase, pl	3e-06
1qqg_A	264	IRS-1, insulin receptor substrate 1; beta-sandwhic	7e-08
1w1g_A	151	HPDK1, 3-phosphoinositide dependent protein kinase	1e-07
2q13_A	385	DCC-interacting protein 13 alpha; APPL1, BAR domai	2e-07
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	6e-07
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-06
2ys3_A	137	UNC-112-related protein 2; PH domain, kindlin-3, s	4e-06
2p0d_A	129	RHO GTPase-activating protein 9; protein-phosphoin	6e-06
1dyn_A	125	Dynamin; signal transduction protein; 2.20A {Homo	8e-06
2j59_M	168	RHO-GTPase activating protein 10; ARF, ARF1, ARFBD	9e-06
4a6h_A	120	Phosphatidylinositol 4,5-bisphosphate-binding Pro	1e-05
4a6h_A	120	Phosphatidylinositol 4,5-bisphosphate-binding Pro	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1wjm_A	123	Beta-spectrin III; PH domain, signal transduction,	4e-05
2r09_A	347	Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph	5e-05
3a8p_A	263	T-lymphoma invasion and metastasis-inducing protei	5e-05
3a8n_A	279	TIAM-1, T-lymphoma invasion and metastasis-inducin	3e-04
3hk0_A	256	Growth factor receptor-bound protein 10; GRB10, RA	6e-04
2dtc_A	126	RAL guanine nucleotide exchange factor ralgps1A; P	6e-04
3pp2_A	124	RHO GTPase-activating protein 27; PH domain, GTPas	8e-04

>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C* Length = 386

 Score =  275 bits (705), Expect = 4e-91
 Identities = 129/322 (40%), Positives = 202/322 (62%), Gaps = 32/322 (9%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE-ALTYITGHM 59
           M   GN+ ++ ++E +VP+ Y  PT S  Q+L ++WIR+KYER+EF +PE    Y  G+ 
Sbjct: 89  MASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQEPYSAGYR 148

Query: 60  DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNVVIAPSKIEHP 118
           +GFL KRG+++G++  R+FVL E    +KY+ +   KEPKA ++I  LN    P+KI HP
Sbjct: 149 EGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHP 208

Query: 119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRD 178
           H LQ+T++KD STR+I++YHE+ + I++W++A+R A+FH LQVAFP A+D++LV  L+R+
Sbjct: 209 HGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLSRN 268

Query: 179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
           + +EG++ KTGPK  + +RKRWFT+D R+LMY ++PL A+ +GE+F+G    GYTV  G 
Sbjct: 269 YLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGF 328

Query: 239 PPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAP 298
           PP  +   +                                  T+ TP R + F+  +  
Sbjct: 329 PPSTQGHHW------------------------------PHGITIVTPDRKFLFACETES 358

Query: 299 DRDQWIQAVQTVLDTPLTPQDH 320
           D+ +W+ A Q  +D P+ PQ++
Sbjct: 359 DQREWVAAFQKAVDRPMLPQEY 380

>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 115

 Score = 97.5 bits (243), Expect = 2e-25
 Identities = 29/108 (26%), Positives = 40/108 (37%), Gaps = 10/108 (9%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           + GWL K  P+    ++KRW   D   + Y+      Y KG I L   S   TVR     
Sbjct: 10  KSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAIS---TVR----- 61

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQR 288
                   F + T QR + F      +R+ WI  +         T Q 
Sbjct: 62  --VQGDNKFEVVTTQRTFVFRVEKEEERNDWISILLNALKSQSLTSQS 107

>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1 Length = 117

 Score = 89.4 bits (222), Expect = 2e-22
 Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 182 EGWLWKTGPKNADAYRKRWFTLDYRK--LMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
           EG L+K G      ++ RWF LD  K  L Y++  +    KG I L            + 
Sbjct: 11  EGILYKKGAFM-KPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIG 69

Query: 240 -PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
            P   D+   F +KT +R Y F A   P   QW+  +Q+
Sbjct: 70  APKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQS 108

>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1 Length = 117

 Score = 43.2 bits (102), Expect = 9e-06
 Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 4/98 (4%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEK-KEPKATLRISEL-NVVIAPSKIEHP 118
           G L K+G     +  R FVL++    ++YY      E K  + ++E+  V      I  P
Sbjct: 12  GILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAP 71

Query: 119 HSLQLTFMKDGSTRH-IYVYHEESQSIMN-WYHAIRNA 154
            ++      D  T   +Y +  +       W   I++ 
Sbjct: 72  KTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSC 109

>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 Length = 125

 Score = 86.0 bits (213), Expect = 5e-21
 Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 4/97 (4%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           + G+  K G      +++R+F LD   + Y +  L   P   I L        V+     
Sbjct: 16  KAGYCVKQGAVM-KNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVH---KVQECKQS 71

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
               +   F + T  R +   A S  +   WI+AV  
Sbjct: 72  DIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSG 108

>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 Length = 125

 Score = 38.6 bits (90), Expect = 5e-04
 Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 12/101 (11%)

Query: 59  MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNVVIA---PSK 114
             G+ +K+G     +  R F L+   +TI Y+  E  KEP   + + E++ V        
Sbjct: 16  KAGYCVKQGAVMKNWKRRYFQLD--ENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDI 73

Query: 115 IEHPHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNA 154
           +   +  ++      +T   +    +S   M+ W  A+  A
Sbjct: 74  MMRDNLFEIV-----TTSRTFYVQADSPEEMHSWIKAVSGA 109

>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 117

 Score = 84.4 bits (209), Expect = 1e-20
 Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 5/97 (5%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           + GWL+K        + KRWF L  R L Y+++       G I L      + V    P 
Sbjct: 13  KAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPL----LSFRVAAVQPS 68

Query: 241 GAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQ 276
               +  TF  +    R Y FSA S  +++ WIQA+ 
Sbjct: 69  DNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMG 105

>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 117

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 11/101 (10%)

Query: 59  MDGFLMKRGKESGK-YHPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNV--VIAPSK 114
             G+L K+     K ++ R FVL   +  + YY  EK +    ++ +    V  V     
Sbjct: 13  KAGWLFKQASSGVKQWNKRWFVLV--DRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDN 70

Query: 115 IEHPHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNA 154
           I   H+ +       +    Y +  ES      W  A+  A
Sbjct: 71  ISRKHTFKAEH----AGVRTYFFSAESPEEQEAWIQAMGEA 107

>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119

 Score = 84.0 bits (208), Expect = 2e-20
 Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 11/99 (11%)

Query: 182 EGWLWKTGPKNA-DAYRKRWFTLDYRK--LMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
            G+L K G K     ++ RWF  D RK  L Y      A P   I L             
Sbjct: 11  CGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAV-------FD 63

Query: 239 PPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
                ++   F +KTP R     A +      W+Q +Q 
Sbjct: 64  CKADAEE-GIFEIKTPSRVITLKAATKQAMLYWLQQLQM 101

>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* Length = 123

 Score = 83.7 bits (207), Expect = 3e-20
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 5/97 (5%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
             GWL K        +++RWF L    L Y+++       G + L      Y +R   P 
Sbjct: 13  IRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLL----PSYNIRPDGPG 68

Query: 241 GAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQ 276
             + + FTFT + P  R Y  +A +  D   W++A+ 
Sbjct: 69  APRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALG 105

>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* Length = 123

 Score = 41.7 bits (98), Expect = 3e-05
 Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 5/98 (5%)

Query: 59  MDGFLMKRGKESGKYHPRR-FVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEH 117
           + G+L K+     +   RR FVL+     + YY K+ +E      +   +  I P     
Sbjct: 13  IRGWLHKQDSSGLRLWKRRWFVLS--GHCLFYY-KDSREESVLGSVLLPSYNIRPDGPGA 69

Query: 118 PHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNA 154
           P   + TF  +      YV   ++   +  W  A+  A
Sbjct: 70  PRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRA 107

>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 122

 Score = 82.9 bits (205), Expect = 7e-20
 Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 5/97 (5%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           + GWL+K        + KRWF L  R L Y+++       G I L      + V    P 
Sbjct: 24  KAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPL----LSFRVAAVQPS 79

Query: 241 GAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQ 276
               +  TF  +    R Y FSA S  +++ WIQA+ 
Sbjct: 80  DNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMG 116

>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 122

 Score = 40.5 bits (95), Expect = 9e-05
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 13/107 (12%)

Query: 59  MDGFLMKRGKESGK-YHPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNVVIAP--SK 114
             G+L K+     K ++ R FVL   +  + YY  EK +    ++ +    V        
Sbjct: 24  KAGWLFKQASSGVKQWNKRWFVLV--DRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDN 81

Query: 115 IEHPHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNAKFHRLQ 160
           I   H+ +       +    Y +  ES      W  A+  A   R+Q
Sbjct: 82  ISRKHTFKAEH----AGVRTYFFSAESPEEQEAWIQAMGEAA--RVQ 122

>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A Length = 126

 Score = 82.8 bits (205), Expect = 7e-20
 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           +EG+L K G      ++ RWFTL   +L Y ++ +S  P   + L  CS    V+     
Sbjct: 20  KEGYLTKQGGLVK-TWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECS---AVQ---FD 72

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
            ++++   F L  P R +   A +  + D+WI+ ++ 
Sbjct: 73  YSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRW 109

>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A Length = 126

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 11/115 (9%)

Query: 42  EREEFRHPEALTYITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEK-KEPKAT 100
             E+   P A +  T   +G+L K+G     +  R F L+   + +KY+  +   EP   
Sbjct: 5   RTEDDLVPTAPSLGT--KEGYLTKQGGLVKTWKTRWFTLH--RNELKYFKDQMSPEPIRI 60

Query: 101 LRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNA 154
           L ++E + V      E  +   L           +    ++    + W   +R  
Sbjct: 61  LDLTECSAVQFDYSQERVNCFCLV-----FPFRTFYLCAKTGVEADEWIKILRWK 110

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus} Length = 228

 Score = 84.3 bits (208), Expect = 2e-19
 Identities = 29/174 (16%), Positives = 49/174 (28%), Gaps = 54/174 (31%)

Query: 181 REGWLWKTGPKNAD----AYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRL 236
           ++GWL   G  ++      ++KRWF L   KLMY E       KG + +    +      
Sbjct: 60  KQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSEEKLKGTVEVRSAKE------ 113

Query: 237 GVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT------------------- 277
            +      +     +    R +   A S  D  QW   +                     
Sbjct: 114 -IIDNTNKE-NGIDIIMADRTFHLIAESPEDASQWFSVLSQVHSSTDQEIREMHDEQANP 171

Query: 278 -----------------------GFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 308
                                    +F + T  R    +A +  +   WI  +Q
Sbjct: 172 QNAVGTLDVGLIDSVCASDSPDRPNSFVIITANRVLHCNADTPEEMHHWITLLQ 225

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus} Length = 228

 Score = 40.7 bits (95), Expect = 2e-04
 Identities = 29/223 (13%), Positives = 61/223 (27%), Gaps = 66/223 (29%)

Query: 61  GFLMKRGKESGKYHP----RR-FVLNEINDTIKYYVKEK-KEPKATLRISELNVVIAPSK 114
           G+L   G  S         +R FVL      + Y+  +  ++ K T+ +     +     
Sbjct: 62  GWLHNNGGGSSTLSRRNWKKRWFVLR--QSKLMYFENDSEEKLKGTVEVRSAKEI--IDN 117

Query: 115 IEHPHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNAKFHRLQVAFPSANDSELVK 173
               + + +           +    ES    + W+  +             S+ D E+ +
Sbjct: 118 TNKENGIDII-----MADRTFHLIAESPEDASQWFSVLSQVH---------SSTDQEIRE 163

Query: 174 LLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYT 233
                                              M+ E+       G +      D   
Sbjct: 164 -----------------------------------MHDEQANPQNAVGTL------DVGL 182

Query: 234 VRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
           +       + D+  +F + T  R    +A +  +   WI  +Q
Sbjct: 183 IDSVCASDSPDRPNSFVIITANRVLHCNADTPEEMHHWITLLQ 225

>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 126

 Score = 80.0 bits (197), Expect = 7e-19
 Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 4/115 (3%)

Query: 166 ANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRK--LMYHEEPLSAYPKGEI 223
           ++ S  +  + R     G+L     +N+  + +R+F LD +   L+++ +       G  
Sbjct: 2   SSGSSGMPYVDRQNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAG 61

Query: 224 FLGHCSDGY--TVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
            +G     Y   V +  P       F F +    + Y   A    D   W++A+ 
Sbjct: 62  AVGSLQLTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALN 116

>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 126

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 18/107 (16%), Positives = 42/107 (39%), Gaps = 10/107 (9%)

Query: 56  TGHMDGFLMKRGKESGKYHPRR-FVLNEINDTIKYYVKEKKE------PKATLRISELNV 108
              + GFL     E+     RR F+L+   + + +Y+   +          +L+++ ++ 
Sbjct: 14  QNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISK 73

Query: 109 VIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNA 154
           V   +  + P +    F+ +  ++  Y      Q  +  W  A+  A
Sbjct: 74  VSIATPKQKPKT-PFCFVINALSQR-YFLQANDQKDLKDWVEALNQA 118

>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 79.7 bits (197), Expect = 7e-19
 Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           ++G++ K G +    + +RWF L    + Y+        KG+I L    +   V     P
Sbjct: 10  KQGYMMKKGHRRK-NWTERWFVLKPNIISYYVSEDLKDKKGDILL---DENCCVE--SLP 63

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
               +   F +K   + ++ SA     + +WIQA+ +
Sbjct: 64  DKDGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHS 100

>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 25/112 (22%), Positives = 40/112 (35%), Gaps = 11/112 (9%)

Query: 59  MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNVV-IAPSKIE 116
             G++MK+G     +  R FVL    + I YYV E  K+ K  + + E   V   P K  
Sbjct: 10  KQGYMMKKGHRRKNWTERWFVLK--PNIISYYVSEDLKDKKGDILLDENCCVESLPDKDG 67

Query: 117 HPHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNA-KFHRLQVAFPSA 166
                 +           +      +     W  AI +     +L  + PS+
Sbjct: 68  KKCLFLVK-----CFDKTFEISASDKKKKQEWIQAIHSTIHLLKLGSSGPSS 114

>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} Length = 128

 Score = 80.2 bits (198), Expect = 8e-19
 Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           R GWL+K        ++KRWF L    L Y+ +       G I L      + + L    
Sbjct: 23  RRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILL----PSFQIALLTSE 78

Query: 241 GAKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQT 277
              ++ + F    P  R Y F   +  + + W++A+  
Sbjct: 79  DHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLD 116

>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} Length = 128

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 59  MDGFLMKRGKESGK-YHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEH 117
             G+L K+     K +  R FVL+  +  + YY +++KE      I   +  IA    E 
Sbjct: 23  RRGWLYKQDSTGMKLWKKRWFVLS--DLCLFYY-RDEKEEGILGSILLPSFQIALLTSED 79

Query: 118 PHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNAKFHRLQVAFPSA 166
             + +  F         Y +  ++   M  W  A+ +A    +Q + PS+
Sbjct: 80  HINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAA--LVQTSGPSS 127

>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 149

 Score = 80.2 bits (197), Expect = 1e-18
 Identities = 18/111 (16%), Positives = 36/111 (32%), Gaps = 6/111 (5%)

Query: 167 NDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLG 226
           +  E +K+       EG+L        + Y   W  L    L ++ +  S     ++ + 
Sbjct: 6   SGQERLKITALPLYFEGFLLIKRSGYRE-YEHYWTELRGTTLFFYTDKKSIIYVDKLDIV 64

Query: 227 HCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
             +      L      +     FTL  P+   Q    +    ++W   + T
Sbjct: 65  DLT-----CLTEQNSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILT 110

>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A Length = 211

 Score = 79.8 bits (196), Expect = 7e-18
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 9/102 (8%)

Query: 181 REGWLWKTGPKNA---DAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLG 237
           + G+L K    ++     ++KRW  L      Y+        KGE  +    DGY VR+ 
Sbjct: 108 KAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAI----DGYDVRMN 163

Query: 238 VPPG-AKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQT 277
                   +   F +  P +R YQF+A S  D ++W+Q ++ 
Sbjct: 164 NTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKF 205

>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1 Length = 108

 Score = 76.7 bits (189), Expect = 8e-18
 Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 11/103 (10%)

Query: 181 REGWLWKTGPKNA---DAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLG 237
           ++G+L K    ++     ++KRW  +      Y+    S  PKG   +     GY+VR+ 
Sbjct: 5   KQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLI----KGYSVRM- 59

Query: 238 VPPGAKDQG--FTFTLKTP-QRWYQFSALSAPDRDQWIQAVQT 277
            P   +D      F L +  +R Y+F+A S  +   W+  +  
Sbjct: 60  APHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISF 102

>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 150

 Score = 77.7 bits (191), Expect = 1e-17
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 19/108 (17%)

Query: 181 REGWLWKTGPKNAD-----AYRKRWFTL------DYRKLMYHEEPLSAYPKGEIFLGHCS 229
           + GWL+K    +A      ++++R+F L       Y    Y +E +S  PKG IFL  C 
Sbjct: 20  KHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCM 79

Query: 230 DGYTVRLGVPPGAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQ 276
                   V    K + F F LK   +  Y  +A S  + ++WI  + 
Sbjct: 80  G-------VVQNNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILN 120

>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A Length = 148

 Score = 76.1 bits (187), Expect = 3e-17
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 9/102 (8%)

Query: 181 REGWLWKTGPKNA---DAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLG 237
           + G+L K    ++     ++KRW  L      Y+        KGE  +    DGY VR+ 
Sbjct: 19  KAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAI----DGYDVRMN 74

Query: 238 VPPGA-KDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQT 277
                   +   F +  P +R YQF+A S  D ++W+Q ++ 
Sbjct: 75  NTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKF 116

>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 118

 Score = 74.8 bits (184), Expect = 6e-17
 Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 13/104 (12%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           + GWL K        +++R+F L  ++L Y+++     P+G ++L     G T++     
Sbjct: 10  KMGWLKKQRSIVK-NWQQRYFVLRAQQLYYYKDEEDTKPQGCMYL----PGCTIKEIATN 64

Query: 241 GAKDQGFTFTLKTP--------QRWYQFSALSAPDRDQWIQAVQ 276
             +   F F +           Q  Y   A S  + ++W++ ++
Sbjct: 65  PEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLR 108

>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 118

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 19/101 (18%), Positives = 35/101 (34%), Gaps = 9/101 (8%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNVVIAPS--KIEH 117
           G+L K+      +  R FVL      + YY  E+  +P+  + +    +    +  +   
Sbjct: 12  GWLKKQRSIVKNWQQRYFVLR--AQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAG 69

Query: 118 PHSLQLTFMKDGSTR---HIYVYHEESQSIMN-WYHAIRNA 154
               ++        R     YV    SQ+ M  W   +R  
Sbjct: 70  KFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRV 110

>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A Length = 109

 Score = 74.0 bits (182), Expect = 1e-16
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 181 REGWLWKTGPKNADAYRKRWFTL--DYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
           ++G L K G +    ++ R F L  D   L Y++   +  P G I L  C    +V    
Sbjct: 9   KQGCLLKQGHRRK-NWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVV-TSVESNS 66

Query: 239 PPGAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQT 277
                ++   F + T  +  Y   A +  +R +WI+A+Q 
Sbjct: 67  NGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQM 106

>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A Length = 109

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 3/97 (3%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNVV-IAPSKIEHP 118
           G L+K+G     +  R+F+L E    + YY     ++P   + +    V  +  +     
Sbjct: 11  GCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRK 70

Query: 119 HSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNA 154
              +  F    +    Y     +      W  AI+ A
Sbjct: 71  SEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMA 107

>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A* Length = 127

 Score = 74.3 bits (182), Expect = 1e-16
 Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 18/132 (13%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           REGWL K G +    +++RWF L    L Y E      P+G I L + S           
Sbjct: 7   REGWLLKLGGRVK-TWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSI-------REV 58

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDR 300
               +   F L  P    Q       + D             ++     Y+ SA S  ++
Sbjct: 59  LDPRKPNCFELYNPSHKGQVIKACKTEAD----------GRVVEGNHVVYRISAPSPEEK 108

Query: 301 DQWIQAVQTVLD 312
           ++W+++++  + 
Sbjct: 109 EEWMKSIKASIS 120

>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 109

 Score = 73.2 bits (180), Expect = 2e-16
 Identities = 22/113 (19%), Positives = 37/113 (32%), Gaps = 16/113 (14%)

Query: 165 SANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIF 224
           S+  S             G+L+++   +   ++  WF +  + L  +             
Sbjct: 2   SSGSSGSTM--------SGYLYRSK-GSKKPWKHLWFVIKNKVLYTYAASEDVAALESQP 52

Query: 225 LGHCSDGYTVRLGVPPGAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQ 276
           L     G+TV L        +   F L      +Y F A  A    +WI A Q
Sbjct: 53  L----LGFTVTL--VKDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQ 99

>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 109

 Score = 47.0 bits (112), Expect = 4e-07
 Identities = 15/103 (14%), Positives = 28/103 (27%), Gaps = 10/103 (9%)

Query: 59  MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELN--VVIAPSKIE 116
           M G+L +       +    FV+    + + Y     ++  A      L   V +   +  
Sbjct: 10  MSGYLYRSKGSKKPWKHLWFVI---KNKVLYTYAASEDVAALESQPLLGFTVTLVKDENS 66

Query: 117 HPHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNAKFHR 158
                QL           YV+  +       W  A +      
Sbjct: 67  ESKVFQLLH----KGMVFYVFKADDAHSTQRWIDAFQEGTVSG 105

>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score = 73.3 bits (180), Expect = 2e-16
 Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 10/96 (10%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           ++G+L K        +++R  ++    L       +     ++ L  C     V+     
Sbjct: 12  KKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSNR-QPAKLNLLTC----QVKP---- 62

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
              +   +F L +  R Y F A    D   WI  + 
Sbjct: 63  -NAEDKKSFDLISHNRTYHFQAEDEQDYVAWISVLT 97

>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score = 48.3 bits (115), Expect = 1e-07
 Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 12/107 (11%)

Query: 59  MDGFLMKRGKESGK-YHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEH 117
             G+L+K+     K +  R+  +   N  +           A L +    V       E 
Sbjct: 12  KKGYLLKKSDGIRKVWQRRKCSVK--NGILTISHATSNRQPAKLNLLTCQVKPNA---ED 66

Query: 118 PHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNAKFHRLQVAF 163
             S  L      S    Y +  E +     W   + N+K   L +AF
Sbjct: 67  KKSFDLI-----SHNRTYHFQAEDEQDYVAWISVLTNSKEEALTMAF 108

>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 113

 Score = 72.0 bits (177), Expect = 5e-16
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 7/97 (7%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           REG+L K G    + ++  W  L    + ++++     PKG I L     G T+      
Sbjct: 7   REGYLVKKG-SVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPL----KGSTLTSPCQD 61

Query: 241 GAKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQ 276
             K   F F + T + + + F A    +RD W++ + 
Sbjct: 62  FGKRM-FVFKITTTKQQDHFFQAAFLEERDAWVRDIN 97

>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 113

 Score = 46.2 bits (110), Expect = 8e-07
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 9/97 (9%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNVV-IAPSKIEHP 118
           G+L+K+G     + P   VL    D I++Y K+    PK  + +    +        +  
Sbjct: 9   GYLVKKGSVFNTWKPMWVVLL--EDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRM 66

Query: 119 HSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNA 154
              ++T     + +  + +        + W   I  A
Sbjct: 67  FVFKIT----TTKQQDHFFQAAFLEERDAWVRDINKA 99

>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A Length = 129

 Score = 71.0 bits (174), Expect = 1e-15
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 181 REGWLWKTGPKNADAYRKRWFTL--DYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
           ++G L K G +    ++ R F L  D   L Y++   +  P G I L  C    +V    
Sbjct: 20  KQGCLLKQGHRRK-NWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVV-TSVESNS 77

Query: 239 PPGAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQT 277
                ++   F + T  +  Y   A +  +R +WI+A+Q 
Sbjct: 78  NGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQM 117

>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A Length = 129

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 3/97 (3%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNVV-IAPSKIEHP 118
           G L+K+G     +  R+F+L E    + YY     ++P   + +    V  +  +     
Sbjct: 22  GCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRK 81

Query: 119 HSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNA 154
              +  F    +    Y     +      W  AI+ A
Sbjct: 82  SEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMA 118

>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} Length = 94

 Score = 69.4 bits (170), Expect = 2e-15
 Identities = 21/98 (21%), Positives = 31/98 (31%), Gaps = 12/98 (12%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAY--PKGEIFLGHCSDGYTVRLGV 238
           R G L K        ++ RW  L    L Y++         +G I L            +
Sbjct: 3   RCGVLSKWTNYIH-GWQDRWVVLKNNALSYYKSEDETEYGCRGSICLSKAV--------I 53

Query: 239 PPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
            P   D    F +      +   A     R QWI A++
Sbjct: 54  TPHDFD-ECRFDISVNDSVWYLRAQDPDHRQQWIDAIE 90

>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} Length = 94

 Score = 40.1 bits (94), Expect = 8e-05
 Identities = 16/97 (16%), Positives = 29/97 (29%), Gaps = 6/97 (6%)

Query: 59  MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHP 118
             G L K       +  R  VL   N+ + YY  E +          L+  +        
Sbjct: 3   RCGVLSKWTNYIHGWQDRWVVLK--NNALSYYKSEDETEYGCRGSICLSKAVITPHDFDE 60

Query: 119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAK 155
               ++   + S  ++     + +    W  AI   K
Sbjct: 61  CRFDISV--NDSVWYLRAQDPDHRQ--QWIDAIEQHK 93

>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens} Length = 164

 Score = 70.2 bits (171), Expect = 7e-15
 Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 5/101 (4%)

Query: 181 REGWLWKTGPK----NADAYRKRWFTLDYRKLMYHEEP-LSAYPKGEIFLGHCSDGYTVR 235
            E  L K   +    +   Y++R F L    L Y+E      Y KG I +        V+
Sbjct: 17  LEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKCVEIVK 76

Query: 236 LGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
                      + F +          A S   RD W++ ++
Sbjct: 77  NDDGVIPCQNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLK 117

>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 129

 Score = 69.2 bits (169), Expect = 7e-15
 Identities = 29/139 (20%), Positives = 41/139 (29%), Gaps = 37/139 (26%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLM---YHEEPLSAYPKGEIFLGHCSDGYTVRLG 237
           ++G+L K G K    ++ R F L         Y        P G   L           G
Sbjct: 20  KQGYLAKQGHKR-KNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNG 78

Query: 238 VPPGAKD--QGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSAL 295
           VP G K   QG  F + T                                    Y   A 
Sbjct: 79  VPTGVKGNVQGNLFKVITKDD-------------------------------THYYIQAS 107

Query: 296 SAPDRDQWIQAVQTVLDTP 314
           S  +R +WI+A++ +   P
Sbjct: 108 SKAERAEWIEAIKKLTSGP 126

>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 129

 Score = 43.7 bits (103), Expect = 8e-06
 Identities = 20/101 (19%), Positives = 31/101 (30%), Gaps = 7/101 (6%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEK--KEPKATLRISELNVVIAPSKIEHP 118
           G+L K+G +   +  RRFVL +    + YY   K    P     +    V          
Sbjct: 22  GYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPT 81

Query: 119 ----HSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNA 154
               +     F         Y     S++    W  AI+  
Sbjct: 82  GVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKL 122

>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A Length = 112

 Score = 68.4 bits (167), Expect = 9e-15
 Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 7/102 (6%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYR-KLMYHEEPLSAYPKGEIFL-GHCSD---GYTVR 235
           + GWL +        ++K WF L     L+Y+++      + ++ +   C +   G   R
Sbjct: 7   KSGWLLRQSTILKR-WKKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECR 65

Query: 236 LGVPPGAKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQ 276
              PP  K +     +     +     A S  D   W   +Q
Sbjct: 66  DTQPPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQ 107

>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A Length = 112

 Score = 39.5 bits (92), Expect = 2e-04
 Identities = 16/109 (14%), Positives = 34/109 (31%), Gaps = 19/109 (17%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRI------------SELNV 108
           G+L+++     ++    F L    D    Y  ++       ++             E   
Sbjct: 9   GWLLRQSTILKRWKKNWFDLWS--DGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRD 66

Query: 109 VIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNAKF 156
              P        LQ+   +DG T  +     ES      W   +++++ 
Sbjct: 67  TQPPDGKSKDCMLQIV-CRDGKTISLCA---ESTDDCLAWKFTLQDSRT 111

>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B Length = 112

 Score = 67.9 bits (166), Expect = 2e-14
 Identities = 14/100 (14%), Positives = 31/100 (31%), Gaps = 8/100 (8%)

Query: 181 REGWLWKTGPKNAD---AYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLG 237
           +EG L      +      ++  +  L    L  + +     P   + +     G      
Sbjct: 2   KEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTDVIPLLSVNM----GGEQCGGC 57

Query: 238 VPPGAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQ 276
                 D+   F +    +   + SA S  +  +W+Q + 
Sbjct: 58  RRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLC 97

>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B Length = 112

 Score = 43.6 bits (103), Expect = 7e-06
 Identities = 18/104 (17%), Positives = 32/104 (30%), Gaps = 14/104 (13%)

Query: 59  MDGFLMKRGKESGKY----HPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNVVIAP- 112
            +G L  +   S            VL+  N  +  Y       P  ++ +          
Sbjct: 2   KEGMLHYKAGTSYLGKEHWKTCFVVLS--NGILYQYPDRTDVIPLLSVNMGGEQCGGCRR 59

Query: 113 -SKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNA 154
            +  + PH+ Q+      S R       ES++ M  W   +  A
Sbjct: 60  ANTTDRPHAFQVIL----SDRPCLELSAESEAEMAEWMQHLCQA 99

>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus} Length = 130

 Score = 65.8 bits (160), Expect = 2e-13
 Identities = 18/104 (17%), Positives = 36/104 (34%), Gaps = 11/104 (10%)

Query: 181 REGWLWKTGP--KNADAYRKRWFTLDY-RKLMYHEEPLSAYPKGEIFL----GHCSDGYT 233
           R GWLW+     +    +++ WF L     L Y+ +  +   +  + +         G  
Sbjct: 10  RGGWLWRQSSILRR---WKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQE 66

Query: 234 VRLGVPPGAKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQ 276
            +   PP  + +    T+   +       A +  D   W  A+ 
Sbjct: 67  CQDVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALM 110

>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus} Length = 130

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 14/103 (13%), Positives = 33/103 (32%), Gaps = 9/103 (8%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKE---KKEPKATLRISELNVVIAPS---- 113
           G+L ++     ++    F L   + T+ YY  E    +E +  +  +  ++ +       
Sbjct: 12  GWLWRQSSILRRWKRNWFALWL-DGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDV 70

Query: 114 KIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNAK 155
           +     S       +           E++     W  A+  A 
Sbjct: 71  QPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEAN 113

>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 107

 Score = 60.6 bits (147), Expect = 5e-12
 Identities = 13/98 (13%), Positives = 35/98 (35%), Gaps = 12/98 (12%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA-YPKGEIFLGHCSDGYTVRLGVP 239
              +L          ++ RW ++    L ++++   +   +  + L  C         VP
Sbjct: 10  TSSYLNVLVNSQ---WKSRWCSVRDNHLHFYQDRNRSKVAQQPLSLVGCEV-------VP 59

Query: 240 PGAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQ 276
             + D  ++F +    +   +  A S+ +   W+  + 
Sbjct: 60  DPSPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLL 97

>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 130

 Score = 59.7 bits (144), Expect = 2e-11
 Identities = 27/132 (20%), Positives = 42/132 (31%), Gaps = 19/132 (14%)

Query: 181 REGWLWKTGP-KNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
              WL   G  K+   + K W  L    L+ ++   +    G + L  C         + 
Sbjct: 10  MADWLKIRGTLKS---WTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNACEI-------IE 59

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPD 299
             +K  GF F L  P       A+  P  +      Q         P  +    A S  D
Sbjct: 60  RPSKKDGFCFKLFHPLE-QSIWAVKGPKGEAVGSITQP-------LPSSYLIIRATSESD 111

Query: 300 RDQWIQAVQTVL 311
              W+ A++  L
Sbjct: 112 GRCWMDALELAL 123

>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 126

 Score = 59.2 bits (143), Expect = 3e-11
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 11/102 (10%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLD-----YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVR 235
             G+LW  G      ++KR+F L         +  + E  +  P+  + L    DGYTV 
Sbjct: 10  HSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAE-PQELLQL----DGYTVD 64

Query: 236 LGVP-PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
              P PG +     F          F++    DR  W+QA+ 
Sbjct: 65  YTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMY 106

>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A Length = 103

 Score = 58.3 bits (141), Expect = 3e-11
 Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 11/98 (11%)

Query: 182 EGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAY--PKGEIFLGHCSDGYTVRLGVP 239
           EG L+K        ++ RWF LD   L Y++         KG I +  C         + 
Sbjct: 2   EGVLYKWT-NYLTGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAVCE--------IK 52

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
             + D      +   ++ +   A++A +R +W+ A+ +
Sbjct: 53  VHSADNTRMELIIPGEQHFYMKAVNAAERQRWLVALGS 90

>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 112

 Score = 57.7 bits (139), Expect = 7e-11
 Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 9/98 (9%)

Query: 183 GWLWKTGPKNADAYRKRWFTL---DYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
           G L  +  ++ + + + W  +   D + L              I L        + +  P
Sbjct: 12  GPLRLS--ESGETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPL----PSCKLSVPDP 65

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
               D G  + L+  ++ +  SA SA  + QW++ + T
Sbjct: 66  EERLDSGHVWKLQWAKQSWYLSASSAELQQQWLETLST 103

>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens} Length = 128

 Score = 56.8 bits (136), Expect = 2e-10
 Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 25/141 (17%)

Query: 181 REGWLWKTGPKNADA-YRKRWFTL-DYRKLMYH---EEPLSAYPKGEIFLGHCSDGYTVR 235
           ++ +L K    + +  ++K++ TL     L+YH    + + +    E+ L          
Sbjct: 6   KQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRT------- 58

Query: 236 LGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTP-QRWYQFSA 294
                       T  +   +     SA          QA +  F F + +   + + F A
Sbjct: 59  ------------TVKVPGKRPPRAISAFGPSASGSAGQAEEENFEFLIVSSTGQTWHFEA 106

Query: 295 LSAPDRDQWIQAVQTVLDTPL 315
            S  +RD W+QA+++ +   L
Sbjct: 107 ASFEERDAWVQAIESQILASL 127

>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 120

 Score = 56.4 bits (136), Expect = 2e-10
 Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 15/101 (14%)

Query: 182 EGWLWKTGPKNADAYRKRWFTLDYRK--LMY--HEEPLSAYPKGEIFLGHCSDGYTVRLG 237
            G+L K        ++ R+F L+     L Y  +E+  +  P+G + L            
Sbjct: 11  YGYLMKYT-NLVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAV-------- 61

Query: 238 VPPGAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQT 277
           + P  +D   TFT+       Y+  A  A +R  W+  +Q 
Sbjct: 62  ISPSDED-SHTFTVNAASGEQYKLRATDAKERQHWVSRLQI 101

>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 120

 Score = 42.2 bits (99), Expect = 2e-05
 Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 5/99 (5%)

Query: 58  HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATL-RISELNVVIAPSKIE 116
           ++ G+LMK       +  R FVLN     ++Y+V E+   +     +     VI+PS  E
Sbjct: 9   NVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAVISPSD-E 67

Query: 117 HPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAK 155
             H+  +      S     +   +++   +W   ++   
Sbjct: 68  DSHTFTVN---AASGEQYKLRATDAKERQHWVSRLQICT 103

>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens} Length = 134

 Score = 56.2 bits (135), Expect = 3e-10
 Identities = 29/136 (21%), Positives = 41/136 (30%), Gaps = 18/136 (13%)

Query: 181 REGWLWK-TGPKNADAYRKRWFTLDYRKLMYHEEPL---SAYPKGEIFLGHCSDGYTVRL 236
             G+L          A+ +RW  L    + Y   P       P G I L +C+       
Sbjct: 7   ERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPA 66

Query: 237 GVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALS 296
                A+   F      PQR      L +  RD                       SA +
Sbjct: 67  NREFCARRNTFELITVRPQREDDRETLVSQCRD--------------TLCVTKNWLSADT 112

Query: 297 APDRDQWIQAVQTVLD 312
             +RD W+Q +  VL 
Sbjct: 113 KEERDLWMQKLNQVLV 128

>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A* Length = 169

 Score = 55.7 bits (133), Expect = 1e-09
 Identities = 23/138 (16%), Positives = 43/138 (31%), Gaps = 20/138 (14%)

Query: 181 REGWLWKTGPK----NADAYRKRWFTLDYRKLMYH----EEPLSAYPKGEIFLGHCSDGY 232
            E    K   +    +   ++K  F L   KL Y+    E       KG I +   +   
Sbjct: 5   LESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVE 64

Query: 233 TVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQF 292
           TV     P             P+R        + + +Q     +  + F +   +     
Sbjct: 65  TVVPEKNP------------PPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYV 112

Query: 293 SALSAPDRDQWIQAVQTV 310
            + +   R +WI  ++ V
Sbjct: 113 FSPTEELRKRWIHQLKNV 130

>2olm_A Nucleoporin-like protein RIP; arfgap, GTPase-activating protein, REV-interacting protein, human immunodeficiency virus, AIDS, structural genomics; 1.48A {Homo sapiens} PDB: 2d9l_A Length = 140

 Score = 54.8 bits (132), Expect = 1e-09
 Identities = 10/51 (19%), Positives = 21/51 (41%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEA 51
           +++ GN V K  +                   +KE+++ KYE++ +  P  
Sbjct: 80  LQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPE 130

>2iqj_A Stromal membrane-associated protein 1-like; zinc, structural genomics, structural genomics consortium, SGC, protein transport; 1.90A {Homo sapiens} Length = 134

 Score = 54.8 bits (132), Expect = 1e-09
 Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHP 49
           M+++GN  +   YE  +P +++ P        ++ +IR KYE++++   
Sbjct: 83  MQEMGNGKANRLYEAYLPETFRRPQIDPA---VEGFIRDKYEKKKYMDR 128

>2crr_A Stromal membrane-associated protein SMAP1B; arfgap domain, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 141

 Score = 54.8 bits (132), Expect = 2e-09
 Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 3/53 (5%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPEALT 53
           M+ +GN  ++L YE  +P +++ P +      ++ +IR KYE++++    A+ 
Sbjct: 85  MQDMGNTKARLLYEANLPENFRRPQTDQA---VEFFIRDKYEKKKYYDKNAIA 134

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 57.1 bits (137), Expect = 2e-09
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 3/78 (3%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKV-PTSSCPQVLLKEWIRSKYEREEFRHPEALTYITGHM 59
           M ++GN +    YE RV A     P  SC +   + WI +KY  ++F     L  I G  
Sbjct: 101 MCELGNVIINQIYEARVEAMAVKKPGPSCSRQEKEAWIHAKYVEKKFLTK--LPEIRGRR 158

Query: 60  DGFLMKRGKESGKYHPRR 77
            G    RG+      P  
Sbjct: 159 GGRGRPRGQPPVPPKPSI 176

>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A Length = 125

 Score = 53.4 bits (128), Expect = 3e-09
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 17/118 (14%)

Query: 165 SANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTL-DYRKLMYHEEPLSAYPKGEI 223
           S +D  +VK        EGWL K G      +R R+F L +    + ++E      + E 
Sbjct: 2   SMSDVAIVK--------EGWLHKRGEYIK-TWRPRYFLLKNDGTFIGYKERPQDVDQREA 52

Query: 224 FLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ----RWYQFSALSAPDRDQWIQAVQT 277
            L + S     +  +    + +  TF ++  Q        F   +  +R++W  A+QT
Sbjct: 53  PLNNFS---VAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQT 107

>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A Length = 125

 Score = 44.9 bits (106), Expect = 3e-06
 Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 6/104 (5%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATL---RISELNVVIAPSKIEH 117
           G+L KRG+    + PR F+L      I Y  + +   +        S     +  ++   
Sbjct: 12  GWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPR 71

Query: 118 PHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNAKFHRLQ 160
           P++  +  ++  +T     +H E+      W  AI+      L+
Sbjct: 72  PNTFIIRCLQW-TTVIERTFHVETPEEREEWTTAIQTVA-DGLK 113

>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A* Length = 264

 Score = 51.8 bits (123), Expect = 7e-08
 Identities = 28/153 (18%), Positives = 41/153 (26%), Gaps = 33/153 (21%)

Query: 164 PSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAY----- 218
            S   S++ K         G+L K   K+     KR+F L           L  Y     
Sbjct: 3   ESDGFSDVRK--------VGYLRKP--KS---MHKRFFVLRAASEAGGPARLEYYENEKK 49

Query: 219 -------PKGEIFLGHCSDGYTVRLGVPPGAKDQG-FTFTLKTPQRWYQFSALSAPDRDQ 270
                  PK  I L  C +       +   A  +      L T    +  +A S  ++D 
Sbjct: 50  WRHKSSAPKRSIPLESCFN-------INKRADSKNKHLVALYTRDEHFAIAADSEAEQDS 102

Query: 271 WIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQW 303
           W QA+                  A         
Sbjct: 103 WYQALLQLHNRAKGHHDGAAALGAGGGGGSCSG 135

>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A Length = 151

 Score = 49.4 bits (117), Expect = 1e-07
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 14/96 (14%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           + G + K   +     R+R   L     +Y+ +P++   KGEI              + P
Sbjct: 54  KMGPVDK---RKGLFARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQE---------LRP 101

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
            AK+   TF + TP R Y     S  +  +W + +Q
Sbjct: 102 EAKNFK-TFFVHTPNRTYYLMDPSG-NAHKWCRKIQ 135

>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A Length = 385

 Score = 50.8 bits (120), Expect = 2e-07
 Identities = 18/159 (11%), Positives = 44/159 (27%), Gaps = 12/159 (7%)

Query: 122 QLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGR 181
           QL          +     E  S +                 +    D     +      +
Sbjct: 221 QLEEFLANIGTSVQNVRREMDSDIETMQQTIEDLEVASDPLYVPDPDPTKFPVNRNLTRK 280

Query: 182 EGWLWK--TGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
            G+L         +  + ++++      LM             + + +C    +V     
Sbjct: 281 AGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARG-DVAGGLAMDIDNC----SVM---A 332

Query: 240 PGAKDQGFTFTLKT--PQRWYQFSALSAPDRDQWIQAVQ 276
              +D+ + F + +   ++     A S  D ++WI  + 
Sbjct: 333 VDCEDRRYCFQITSFDGKKSSILQAESKKDHEEWICTIN 371

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 49.2 bits (117), Expect = 6e-07
 Identities = 9/52 (17%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 1   MKQIGNNVSKLKYEMRVPAS-YKVPTSSCPQVLLKEWIRSKYEREEFRHPEA 51
              +GN       E ++P+     P++       +++I +KY    F     
Sbjct: 98  ALNMGNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRCT 149

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 48.1 bits (114), Expect = 1e-06
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKV-PTSSCPQVLLKEWIRSKYEREEFRHPE 50
            K IGN       E  +P+   V P      +  K++I +KY    +   +
Sbjct: 73  AKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKK 123

>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 137

 Score = 44.6 bits (105), Expect = 4e-06
 Identities = 14/101 (13%), Positives = 28/101 (27%), Gaps = 10/101 (9%)

Query: 182 EGWLWKTGPKNAD--AYRKRWFTLDYRKLMY--HEEPLSAYPKGEIFLGHCSDGYTVRLG 237
           +  L    P+      YR+ W       L Y   ++     P  ++ L     G  V   
Sbjct: 12  KDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEAPGDPIQQLNL----KGCEVVPD 67

Query: 238 VPPGAKDQGFTFTLKTPQ--RWYQFSALSAPDRDQWIQAVQ 276
           V    +       + +P+                +W+   +
Sbjct: 68  VNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGCR 108

>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A* Length = 129

 Score = 44.1 bits (104), Expect = 6e-06
 Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 11/108 (10%)

Query: 181 REGWLWKT-----GPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVR 235
           + G L  T     G K    +   W  L    L+++ EP    P             +V 
Sbjct: 14  KSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVD 73

Query: 236 L-----GVPPGAKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQT 277
           L             +     ++T     +   +    +   W +A++T
Sbjct: 74  LRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRT 121

>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A Length = 125

 Score = 43.5 bits (102), Expect = 8e-06
 Identities = 19/107 (17%), Positives = 32/107 (29%), Gaps = 14/107 (13%)

Query: 181 REGWLWKTGPKNADAYRKR-WFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
           R+GWL            K  WF L    L ++++      K  + +    D   +R  V 
Sbjct: 14  RKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSV----DNLKLR-DVE 68

Query: 240 PGAKDQGFTFTLKTP--------QRWYQFSALSAPDRDQWIQAVQTG 278
            G       F L            R  + +  +  + D W  +    
Sbjct: 69  KGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 115

>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A Length = 168

 Score = 44.4 bits (104), Expect = 9e-06
 Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 19/110 (17%)

Query: 181 REGWLWKTGPKNAD---------AYRKRWFTLDYRKLMYH----EEPLSAYPKGEIFLGH 227
           +EGWL                   +++ +  L    L  +    E+   +  +  I +  
Sbjct: 5   KEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNA 64

Query: 228 CSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
           C       + +      +   F L T      F A    D   WI+ +Q 
Sbjct: 65  CL------IDISYSETKRKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQE 108

>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A Length = 120

 Score = 42.7 bits (100), Expect = 1e-05
 Identities = 19/133 (14%), Positives = 38/133 (28%), Gaps = 27/133 (20%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA---YPKGEIFLGHCSDGYTVRLG 237
           + G+L +   K   +Y K ++ L    L   +         P   + L  C+        
Sbjct: 8   KSGFLERRS-KFLKSYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSECTVT------ 60

Query: 238 VPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSA 297
                  +  T +  +     +F           + A Q G    +      + F A S 
Sbjct: 61  ---EHSRKNSTSSPNSTGSDAKFV----------LHAKQNG----IIRRGHNWVFKADSY 103

Query: 298 PDRDQWIQAVQTV 310
                W   ++ +
Sbjct: 104 ESMMSWFDNLKIL 116

>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A Length = 120

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 17/109 (15%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYY----VKEKKEPKATL--------RISELNV 108
           GFL +R K    Y    +VL    + +  +     K+   P  +L          S  N 
Sbjct: 10  GFLERRSKFLKSYSKGYYVLT--PNFLHEFKTADRKKDLVPVMSLALSECTVTEHSRKNS 67

Query: 109 VIAPSKIEHPHSLQLTFMKDGSTR--HIYVYHEESQSIMN-WYHAIRNA 154
             +P+         L   ++G  R  H +V+  +S   M  W+  ++  
Sbjct: 68  TSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKIL 116

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 2e-05
 Identities = 41/316 (12%), Positives = 101/316 (31%), Gaps = 71/316 (22%)

Query: 32  LLKEWIRSKYE--REEFR--HPEALTYITGHMDGFLMKRGKESGKYHPRRFVLNEINDTI 87
           LL +++  + +    E    +P  L+ I        ++ G  +     +    +++   I
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSII-----AESIRDGLATWDNW-KHVNCDKLTTII 359

Query: 88  KYYVK--EKKEPKA---TLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQ 142
           +  +   E  E +     L +   +  I P+ +     L L    D           +  
Sbjct: 360 ESSLNVLEPAEYRKMFDRLSVFPPSAHI-PTIL-----LSL-IWFDVIK-------SDVM 405

Query: 143 SIMNWYH----AIRNAK-----FHRLQVAF--PSANDSEL-VKLLTRDFGREGW-LWKTG 189
            ++N  H      +  K        + +       N+  L   ++      + +      
Sbjct: 406 VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLI 465

Query: 190 PKNADAYRKRWFTLDYRKLMYH------EEPLSAYPKGEIFLGHCSD----GYTVRLGVP 239
           P   D Y   +++  +  + +H       E ++ +    +FL    D       +R    
Sbjct: 466 PPYLDQY---FYS--H--IGHHLKNIEHPERMTLFRM--VFL----DFRFLEQKIRHDST 512

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFS-----A 294
                     TL+  + +  +   + P  ++ + A+   F   ++      +++     A
Sbjct: 513 AWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILD-FLPKIEENLICSKYTDLLRIA 571

Query: 295 LSAPDRDQWIQAVQTV 310
           L A D   + +A + V
Sbjct: 572 LMAEDEAIFEEAHKQV 587

>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 123

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 15/104 (14%), Positives = 30/104 (28%), Gaps = 8/104 (7%)

Query: 181 REGWLWKTGPKNADAYR-------KRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYT 233
            EG L +     A   +         +  L    L ++++  +A                
Sbjct: 10  MEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLAR 69

Query: 234 VRLGVPPGAKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQ 276
            +  V    + +   F L     + Y F A    +   W++ V 
Sbjct: 70  AQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVN 113

>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A* Length = 347

 Score = 43.5 bits (102), Expect = 5e-05
 Identities = 37/168 (22%), Positives = 65/168 (38%), Gaps = 26/168 (15%)

Query: 148 YHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRK 207
           Y +I+N  F       P  + ++L         REGWL K        +++RWF L    
Sbjct: 188 YESIKNEPFK-----IPEDDGNDLTYTFFNP-DREGWLLKL-GGRVKTWKRRWFILTDNC 240

Query: 208 LMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPD 267
           L Y E      P+G I L    +  ++R    P        F L  P             
Sbjct: 241 LYYFEYTTDKEPRGIIPL----ENLSIREVEDPRKP---NCFELYNPS-----------H 282

Query: 268 RDQWIQAVQTGFTFTL-KTPQRWYQFSALSAPDRDQWIQAVQTVLDTP 314
           + Q I+A +T     + +     Y+ SA S  ++++W+++++  +   
Sbjct: 283 KGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 330

>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A Length = 263

 Score = 43.0 bits (100), Expect = 5e-05
 Identities = 20/109 (18%), Positives = 32/109 (29%), Gaps = 12/109 (11%)

Query: 181 REGWLWKTGPKNADAYRK-----------RWFTLDYRKLMYHEEPLSAYPKGEIFLGHCS 229
           + GWL+          RK            W TL    L+++E       +         
Sbjct: 13  KAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCAL 72

Query: 230 DGYTVRLGVPPGAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQT 277
                 +   P    +   F L       Y F A S  D + W+ A+ +
Sbjct: 73  FAEDSIVQSVPEHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHS 121

>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus} Length = 279

 Score = 40.7 bits (94), Expect = 3e-04
 Identities = 18/102 (17%), Positives = 31/102 (30%), Gaps = 5/102 (4%)

Query: 181 REGWLWKTGPKNADAYR----KRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRL 236
           +   + K   K   A R      W +L    L ++E    +         H        +
Sbjct: 20  KNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIV 79

Query: 237 GVPPGAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQT 277
              P    + F F L       + F   S  + + WI A+ +
Sbjct: 80  QAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHS 121

>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens} Length = 256

 Score = 39.8 bits (92), Expect = 6e-04
 Identities = 15/103 (14%), Positives = 29/103 (28%), Gaps = 11/103 (10%)

Query: 182 EGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPG 241
           +G+L         +++K +  L    L    +  SA P+    L    D   +   +   
Sbjct: 135 QGFLHVKELGK-KSWKKLYVCLRRSGLYCSTKGTSAAPRHLQLLADLED-SNIFSLIAGR 192

Query: 242 AKDQG---FTFTLKTPQ------RWYQFSALSAPDRDQWIQAV 275
            +          +K  +            A     R  W+ A 
Sbjct: 193 KQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAF 235

>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus} Length = 126

 Score = 38.1 bits (88), Expect = 6e-04
 Identities = 21/109 (19%), Positives = 33/109 (30%), Gaps = 16/109 (14%)

Query: 181 REGWLW-----KTGPKNADA-YRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCS----- 229
            EG L      K G K A + + + W  L    L+Y+          + +          
Sbjct: 3   MEGPLRRKTLLKEGRKPALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSI 62

Query: 230 DGYTVRLGVPPGAKDQGFTFTLKTPQ--RWYQFSALSAPDRDQWIQAVQ 276
            G+ V     P   +    F L  P     Y+F   S      W + + 
Sbjct: 63  VGWMV---QLPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLD 108

>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens} Length = 124

 Score = 37.9 bits (88), Expect = 8e-04
 Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 20/113 (17%)

Query: 181 REGWLWKTGPKNADAYRK--------RWFTLDYRKLMYHEEPLSAYPKGEIFLGHCS--- 229
           + G L +T  K AD  ++         W  L+   L + ++  ++   G       S   
Sbjct: 10  KAGVLHRT--KTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPE 67

Query: 230 -----DGYTVRLGVPPGAKDQGFTFTLKTPQR-WYQFSALSAPDRDQWIQAVQ 276
                 G T+       +  +     L++     Y     S      W +A+ 
Sbjct: 68  YTVELRGATLSWAPKDKSSRK-NVLELRSRDGSEYLIQHDSEAIISTWHKAIA 119

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	321
3lju_X	386	ARF-GAP with dual PH domain-containing protein 1;	100.0
3tfm_A	228	Myosin X; split PH domain, motor protein; 2.53A {R	100.0
1v5p_A	126	Pleckstrin homology domain-containing, family A; T	99.91
1wi1_A	126	Calcium-dependent activator protein for secretion,	99.91
3tfm_A	228	Myosin X; split PH domain, motor protein; 2.53A {R	99.89
1x1f_A	149	Signal-transducing adaptor protein 1; docking prot	99.89
2coc_A	112	FYVE, rhogef and PH domain containing protein 3; s	99.88
1v88_A	130	Oxysterol binding protein-related protein 8; vesic	99.88
2rsg_A	94	Collagen type IV alpha-3-binding protein; pleckstr	99.88
1fao_A	126	Dual adaptor of phosphotyrosine and 3- phosphoinos	99.88
1dyn_A	125	Dynamin; signal transduction protein; 2.20A {Homo	99.87
1wgq_A	109	FYVE, rhogef and PH domain containing 6; ethanol d	99.87
1v89_A	118	Hypothetical protein KIAA0053; pleckstrin homology	99.87
1upq_A	123	PEPP1; PH domain, phosphoinositide binding, signal	99.87
2d9v_A	130	Pleckstrin homology domain-containing protein fami	99.87
2d9y_A	117	Pleckstrin homology domain-containing protein fami	99.87
1pls_A	113	Pleckstrin homology domain; phosphorylation; NMR {	99.87
1v5u_A	117	SBF1, SET binding factor 1; MTMR5, the pleckstrin	99.86
2cod_A	115	Centaurin-delta 1; ARF GAP and RHO GAP with ankyri	99.86
2dkp_A	128	Pleckstrin homology domain-containing family A mem	99.86
2yry_A	122	Pleckstrin homology domain-containing family A mem	99.86
1eaz_A	125	Tandem PH domain containing protein-1; lipid-bindi	99.86
2dn6_A	115	KIAA0640 protein; PH domain, structural genomics,	99.86
2i5f_A	109	Pleckstrin; PH domain, protein-inositol phosphate	99.86
3rcp_A	103	Pleckstrin homology domain-containing family A ME;	99.86
2lul_A	164	Tyrosine-protein kinase TEC; structural genomics,	99.85
2dhk_A	119	TBC1 domain family member 2; PH domain, paris-1, s	99.85
3aj4_A	112	Pleckstrin homology domain-containing family B ME;	99.85
1u5f_A	148	SRC-associated adaptor protein; PH domain of SKAP-	99.85
1fgy_A	127	GRP1; PH domain, signaling protein; HET: 4IP; 1.50	99.85
1x05_A	129	Pleckstrin; PH domain, structural genomics, NPPSFA	99.85
1btk_A	169	Bruton'S tyrosine kinase; transferase, PH domain,	99.85
2p0d_A	129	RHO GTPase-activating protein 9; protein-phosphoin	99.85
4a6h_A	120	Phosphatidylinositol 4,5-bisphosphate-binding Pro	99.84
1u5d_A	108	SKAP55, SRC kinase-associated phosphoprotein of 55	99.84
2w2x_D	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.83
2da0_A	114	130-kDa phosphatidylinositol 4,5-biphosphate- depe	99.83
1x1g_A	129	Pleckstrin 2; PH domain, structural genomics, rike	99.83
2d9x_A	120	Oxysterol binding protein-related protein 11; PH d	99.83
3cxb_B	112	Pleckstrin homology domain-containing family M mem	99.83
1wi1_A	126	Calcium-dependent activator protein for secretion,	99.83
1wgq_A	109	FYVE, rhogef and PH domain containing 6; ethanol d	99.82
2y7b_A	134	Actin-binding protein anillin; cell cycle; 1.90A {	99.82
1wg7_A	150	Dedicator of cytokinesis protein 9; pleckstrin hom	99.81
2rsg_A	94	Collagen type IV alpha-3-binding protein; pleckstr	99.81
1unq_A	125	RAC-alpha serine/threonine kinase; transferase, pl	99.81
1pls_A	113	Pleckstrin homology domain; phosphorylation; NMR {	99.81
2cof_A	107	Protein KIAA1914; PH domain, structural genomics,	99.81
2j59_M	168	RHO-GTPase activating protein 10; ARF, ARF1, ARFBD	99.8
1wjm_A	123	Beta-spectrin III; PH domain, signal transduction,	99.8
1btn_A	106	Beta-spectrin; signal transduction protein; HET: I	99.8
1u5e_A	211	SRC-associated adaptor protein; novel dimerization	99.8
1v88_A	130	Oxysterol binding protein-related protein 8; vesic	99.8
2rlo_A	128	Centaurin-gamma 1; split PH domain, alternative sp	99.79
1x1f_A	149	Signal-transducing adaptor protein 1; docking prot	99.79
1fgy_A	127	GRP1; PH domain, signaling protein; HET: 4IP; 1.50	99.79
4a6h_A	120	Phosphatidylinositol 4,5-bisphosphate-binding Pro	99.79
2r09_A	347	Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph	99.79
3rcp_A	103	Pleckstrin homology domain-containing family A ME;	99.79
2dhk_A	119	TBC1 domain family member 2; PH domain, paris-1, s	99.79
2dn6_A	115	KIAA0640 protein; PH domain, structural genomics,	99.78
1fao_A	126	Dual adaptor of phosphotyrosine and 3- phosphoinos	99.78
3aj4_A	112	Pleckstrin homology domain-containing family B ME;	99.77
1dyn_A	125	Dynamin; signal transduction protein; 2.20A {Homo	99.77
3cxb_B	112	Pleckstrin homology domain-containing family M mem	99.77
1v5u_A	117	SBF1, SET binding factor 1; MTMR5, the pleckstrin	99.77
1unq_A	125	RAC-alpha serine/threonine kinase; transferase, pl	99.77
3a8p_A	263	T-lymphoma invasion and metastasis-inducing protei	99.77
2w2x_D	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.77
1v89_A	118	Hypothetical protein KIAA0053; pleckstrin homology	99.77
2d9v_A	130	Pleckstrin homology domain-containing protein fami	99.77
2da0_A	114	130-kDa phosphatidylinositol 4,5-biphosphate- depe	99.77
2i5f_A	109	Pleckstrin; PH domain, protein-inositol phosphate	99.76
1dro_A	122	Beta-spectrin; cytoskeleton; NMR {Drosophila melan	99.76
2dkp_A	128	Pleckstrin homology domain-containing family A mem	99.76
2cod_A	115	Centaurin-delta 1; ARF GAP and RHO GAP with ankyri	99.76
1eaz_A	125	Tandem PH domain containing protein-1; lipid-bindi	99.76
2d9y_A	117	Pleckstrin homology domain-containing protein fami	99.76
1u5d_A	108	SKAP55, SRC kinase-associated phosphoprotein of 55	99.76
1upq_A	123	PEPP1; PH domain, phosphoinositide binding, signal	99.76
2dtc_A	126	RAL guanine nucleotide exchange factor ralgps1A; P	99.76
3pp2_A	124	RHO GTPase-activating protein 27; PH domain, GTPas	99.76
2lul_A	164	Tyrosine-protein kinase TEC; structural genomics,	99.75
1u5f_A	148	SRC-associated adaptor protein; PH domain of SKAP-	99.75
2coc_A	112	FYVE, rhogef and PH domain containing protein 3; s	99.75
1v5p_A	126	Pleckstrin homology domain-containing, family A; T	99.75
2yry_A	122	Pleckstrin homology domain-containing family A mem	99.75
1x05_A	129	Pleckstrin; PH domain, structural genomics, NPPSFA	99.75
2d9x_A	120	Oxysterol binding protein-related protein 11; PH d	99.75
1qqg_A	264	IRS-1, insulin receptor substrate 1; beta-sandwhic	99.74
1btn_A	106	Beta-spectrin; signal transduction protein; HET: I	99.74
2y7b_A	134	Actin-binding protein anillin; cell cycle; 1.90A {	99.74
2q13_A	385	DCC-interacting protein 13 alpha; APPL1, BAR domai	99.72
2p0d_A	129	RHO GTPase-activating protein 9; protein-phosphoin	99.72
1btk_A	169	Bruton'S tyrosine kinase; transferase, PH domain,	99.71
1wg7_A	150	Dedicator of cytokinesis protein 9; pleckstrin hom	99.71
2cof_A	107	Protein KIAA1914; PH domain, structural genomics,	99.71
1x1g_A	129	Pleckstrin 2; PH domain, structural genomics, rike	99.7
4h8s_A	407	DCC-interacting protein 13-beta; BAR domain, pleck	99.7
1u5e_A	211	SRC-associated adaptor protein; novel dimerization	99.7
2j59_M	168	RHO-GTPase activating protein 10; ARF, ARF1, ARFBD	99.69
3tca_A	291	Amyloid beta A4 precursor protein-binding family 1	99.69
2rov_A	117	RHO-associated protein kinase 2; ATP-binding, coil	99.69
1wjm_A	123	Beta-spectrin III; PH domain, signal transduction,	99.68
3lju_X	386	ARF-GAP with dual PH domain-containing protein 1;	99.67
2rlo_A	128	Centaurin-gamma 1; split PH domain, alternative sp	99.67
2r09_A	347	Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph	99.67
2fjl_A	150	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.64
2ys3_A	137	UNC-112-related protein 2; PH domain, kindlin-3, s	99.64
2d9w_A	127	Docking protein 2; PH domain, structural genomics,	99.62
3a8p_A	263	T-lymphoma invasion and metastasis-inducing protei	99.61
3tca_A	291	Amyloid beta A4 precursor protein-binding family 1	99.61
1dro_A	122	Beta-spectrin; cytoskeleton; NMR {Drosophila melan	99.61
1qqg_A	264	IRS-1, insulin receptor substrate 1; beta-sandwhic	99.6
3pp2_A	124	RHO GTPase-activating protein 27; PH domain, GTPas	99.58
2dtc_A	126	RAL guanine nucleotide exchange factor ralgps1A; P	99.58
2rov_A	117	RHO-associated protein kinase 2; ATP-binding, coil	99.58
2q13_A	385	DCC-interacting protein 13 alpha; APPL1, BAR domai	99.55
2fjl_A	150	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.53
4h8s_A	407	DCC-interacting protein 13-beta; BAR domain, pleck	99.52
2ys3_A	137	UNC-112-related protein 2; PH domain, kindlin-3, s	99.49
3a8n_A	279	TIAM-1, T-lymphoma invasion and metastasis-inducin	99.49
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.48
4f7h_A	173	Fermitin family homolog 2; beta-barrel, membrane b	99.45
2coa_A	125	Protein kinase C, D2 type; protein kinase D2, PH d	99.45
1w1g_A	151	HPDK1, 3-phosphoinositide dependent protein kinase	99.45
3hk0_A	256	Growth factor receptor-bound protein 10; GRB10, RA	99.42
2d9z_A	129	Protein kinase C, NU type; PH domain, structural g	99.39
4gmv_A	281	RAS-associated and pleckstrin homology domains-CO	99.38
4bbk_A	165	Kindlin-1, fermitin family homolog 1; PH domain, c	99.36
3hk0_A	256	Growth factor receptor-bound protein 10; GRB10, RA	99.35
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.35
4gmv_A	281	RAS-associated and pleckstrin homology domains-CO	99.29
3a8n_A	279	TIAM-1, T-lymphoma invasion and metastasis-inducin	99.28
4f7h_A	173	Fermitin family homolog 2; beta-barrel, membrane b	99.23
2d9w_A	127	Docking protein 2; PH domain, structural genomics,	99.22
4bbk_A	165	Kindlin-1, fermitin family homolog 1; PH domain, c	99.18
2iqj_A	134	Stromal membrane-associated protein 1-like; zinc,	99.17
2crr_A	141	Stromal membrane-associated protein SMAP1B; arfgap	99.15
2coa_A	125	Protein kinase C, D2 type; protein kinase D2, PH d	98.99
2olm_A	140	Nucleoporin-like protein RIP; arfgap, GTPase-activ	98.98
2d9z_A	129	Protein kinase C, NU type; PH domain, structural g	98.89
1v5m_A	136	SH2 and PH domain-containing adapter protein APS;	98.89
1w1g_A	151	HPDK1, 3-phosphoinositide dependent protein kinase	98.88
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	98.79
1zc3_B	113	Exocyst complex protein EXO84; exocytosis, small G	98.53
1v61_A	132	RAC/CDC42 guanine nucleotide exchange factor (GEF)	98.47
3qwm_A	140	Iqsec1, IQ motif and SEC7 domain-containing protei	98.22
3ml4_A	224	Protein DOK-7; tyrosine phosphorylation, adapter p	98.16
3mpx_A	434	FYVE, rhogef and PH domain-containing protein 5; s	98.03
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	97.98
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	97.94
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	97.92
2lg1_A	185	A-kinase anchor protein 13; metal binding protein;	97.88
1v5m_A	136	SH2 and PH domain-containing adapter protein APS;	97.8
1v61_A	132	RAC/CDC42 guanine nucleotide exchange factor (GEF)	97.76
1mai_A	131	Phospholipase C delta-1; pleckstrin, inositol tris	97.76
1xcg_A	368	PDZ-rhogef, RHO guanine nucleotide exchange factor	97.74
3t06_A	418	PDZ-rhogef, RHO guanine nucleotide exchange factor	97.74
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	97.73
1mai_A	131	Phospholipase C delta-1; pleckstrin, inositol tris	97.72
1zc3_B	113	Exocyst complex protein EXO84; exocytosis, small G	97.7
2dfk_A	402	Collybistin II; DH domain, PH domain, cell cycle;	97.7
1dbh_A	354	Protein (human SOS 1); guanine nucleotide exchange	97.69
3qwm_A	140	Iqsec1, IQ motif and SEC7 domain-containing protei	97.68
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	97.59
3odw_A	536	RHO guanine nucleotide exchange factor 1; regulati	97.54
3ky9_A	587	Proto-oncogene VAV; calponin homology domain, DBL	97.54
3ml4_A	224	Protein DOK-7; tyrosine phosphorylation, adapter p	97.49
1txd_A	385	RHO guanine nucleotide exchange factor 12; helical	97.46
3p6a_A	377	RHO guanine nucleotide exchange factor 1; regulati	97.42
3jzy_A	510	Intersectin 2; C2 domain, structural genomics cons	97.42
1kz7_A	353	Guanine nucleotide exchange factor DBS; guanine nu	97.37
2z0q_A	346	XPLN, RHO guanine nucleotide exchange factor 3; DH	97.36
1nty_A	311	Triple functional domain protein; DBL, pleckstrin,	97.3
2lg1_A	185	A-kinase anchor protein 13; metal binding protein;	97.2
3mpx_A	434	FYVE, rhogef and PH domain-containing protein 5; s	97.07
2rgn_B	354	RHOA/RAC/CDC42 exchange factor; heterotrimeric G-p	97.06
3t06_A	418	PDZ-rhogef, RHO guanine nucleotide exchange factor	96.97
2z0q_A	346	XPLN, RHO guanine nucleotide exchange factor 3; DH	96.94
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	96.86
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	96.83
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	96.82
1dbh_A	354	Protein (human SOS 1); guanine nucleotide exchange	96.81
3ksy_A	1049	SOS-1, SON of sevenless homolog 1; RAS, RAS activa	96.78
2dfk_A	402	Collybistin II; DH domain, PH domain, cell cycle;	96.76
1foe_A	377	T-lymphoma invasion and metastasis inducing protei	96.75
1xcg_A	368	PDZ-rhogef, RHO guanine nucleotide exchange factor	96.75
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	96.69
1txd_A	385	RHO guanine nucleotide exchange factor 12; helical	96.65
3p6a_A	377	RHO guanine nucleotide exchange factor 1; regulati	96.64
3ky9_A	587	Proto-oncogene VAV; calponin homology domain, DBL	96.59
1kz7_A	353	Guanine nucleotide exchange factor DBS; guanine nu	96.38
3odw_A	536	RHO guanine nucleotide exchange factor 1; regulati	96.38
1nty_A	311	Triple functional domain protein; DBL, pleckstrin,	96.25
2rgn_B	354	RHOA/RAC/CDC42 exchange factor; heterotrimeric G-p	95.84
3jzy_A	510	Intersectin 2; C2 domain, structural genomics cons	95.72
3ksy_A	1049	SOS-1, SON of sevenless homolog 1; RAS, RAS activa	95.19
1z87_A	263	Alpha-1-syntrophin; protein binding; NMR {Mus musc	94.6
2crw_A	149	ARF GAP 3, ADP-ribosylation factor GTPase-activati	94.59
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	94.3
2owa_A	138	Arfgap-like finger domain containing protein; zinc	94.06
1foe_A	377	T-lymphoma invasion and metastasis inducing protei	93.71
2adz_A	178	Alpha-1-syntrophin; protein binding; NMR {Mus musc	93.43
1fho_A	119	UNC-89; pleckstrin homology domain, electrostatics	93.21
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	92.92
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	87.06
3a98_B	203	Engulfment and cell motility protein 1; protein-pr	85.38
2p57_A	144	GTPase-activating protein ZNF289; zinc finger, GAP	82.95
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	82.85
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	82.53
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	81.5
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	81.2
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	80.69

>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*

Probab=100.00  E-value=2.3e-68  Score=506.48  Aligned_cols=288  Identities=45%  Similarity=0.894  Sum_probs=264.0

Q ss_pred             CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcccccCC-CccccccceeeEEEeecCCCCCceeeEEE
Q psy9639           1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE-ALTYITGHMDGFLMKRGKESGKYHPRRFV   79 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~-~~~~~~~~~~G~L~K~g~~~~~wk~R~fv   79 (321)
                      |..+||..||++||+++|.++++|+++|+..+||+|||+||++++|+.++ +.+|+++.++|||+|+|+..++|++||||
T Consensus        89 ~~~~gN~~~~~~~e~~~~~~~~~p~~~~~~~~~e~fIr~KY~~~~f~~~~~~~~~~~~~keG~L~KrG~~~k~WkrRwFV  168 (386)
T 3lju_X           89 MASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFV  168 (386)
T ss_dssp             HHHSSHHHHHHHHTTTCCTTSCCCCTTSCHHHHHHHHHHHHTSCTTTSGGGGHHHHSSEEEEEEEEECSSSCCEEEEEEE
T ss_pred             HHHhcchHHHHHHhccCCccCCCCCCccchHHHHHEHHhhhCCCEEECCccCccccccccccceeeeccccCCceEEEEE
Confidence            56789999999999999999999999999999999999999999999988 67899999999999999999999999999


Q ss_pred             EeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhhhh
Q psy9639          80 LNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHR  158 (321)
Q Consensus        80 L~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~~  158 (321)
                      |...++.|.||++ ++..|+|+|.|.++++++.|.+.+++++|+|.|..++++|+|||+|+|++++.+|+++|+.++...
T Consensus       169 L~~~~~~L~Yy~~~~~~~p~g~I~L~~~~~~~~~~~~~~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~~~~  248 (386)
T 3lju_X          169 LTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHY  248 (386)
T ss_dssp             EETTTTEEEEEC-----CCSEEEEGGGEEEEECHHHHTSTTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             EEcCCCEEEEECCCCccCcccEEEeeccEEEEcccccCCCceEEEEEecCCCceEEEEEcCCHHHHHHHHHhhhhccccc
Confidence            9544999999999 899999999999998888887889999999999999999999999999999999999999999988


Q ss_pred             ccccCCCCChhhhhhhhCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCC
Q psy9639         159 LQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV  238 (321)
Q Consensus       159 l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~  238 (321)
                      ++.++|.+.++++.+.++.+++++|||.|+|+...+.||+|||||+++.|+||+++.+..|+|.|+|..+..++.|..+.
T Consensus       249 lq~~~p~~~~~el~~~l~~~~~k~G~L~K~g~~~~k~WKkRwFVL~~~~L~YYk~~~d~~~~G~I~L~~~~~~~~v~~~~  328 (386)
T 3lju_X          249 LQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGF  328 (386)
T ss_dssp             HHHHSTTCCHHHHGGGSSCCCSEEEEEEECCTTSCSCCEEEEEEEETTEEEEESSTTCSBCSEEEECCCGGGTCEEEESC
T ss_pred             ccccCCccchhhcccccccccceeeeEEEECCCCCCCCcccEEEEECCEEEEEecCCCcccceEEEeecceeeeeecccC
Confidence            99999999999999999999999999999998765799999999999999999999999999999999988888888766


Q ss_pred             CCCCCCC--CceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhccccccccCceEEEEecCCHHHHHHHHHHHHHhhcCCCC
Q psy9639         239 PPGAKDQ--GFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVLDTPLT  316 (321)
Q Consensus       239 ~~~~~~~--~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~~~l~~~~~~~~l~a~s~~e~~~Wi~al~~~i~~~l~  316 (321)
                      +......  +++|+|++++|+|+                                |+|+|++|+++|+.||+.||++|++
T Consensus       329 ~~~~~~~~~~~~F~I~t~~rty~--------------------------------l~A~s~~e~~~Wi~aL~~~i~~p~~  376 (386)
T 3lju_X          329 PPSTQGHHWPHGITIVTPDRKFL--------------------------------FACETESDQREWVAAFQKAVDRPML  376 (386)
T ss_dssp             CTTCCSCCSCEEEEEECSSCEEE--------------------------------EEESSHHHHHHHHHHHHHHHHSCCC
T ss_pred             CccccccCCCcEEEEEeCCeEEE--------------------------------EEcCCHHHHHHHHHHHHHHHhccCC
Confidence            5554333  69999999999999                                8899999999999999999999999


Q ss_pred             CCCC
Q psy9639         317 PQDH  320 (321)
Q Consensus       317 ~~~~  320 (321)
                      |||+
T Consensus       377 p~~~  380 (386)
T 3lju_X          377 PQEY  380 (386)
T ss_dssp             HHHH
T ss_pred             chHh
Confidence            9875

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}

Probab=100.00  E-value=7.4e-32  Score=238.65  Aligned_cols=162  Identities=22%  Similarity=0.426  Sum_probs=137.2

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY  135 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~  135 (321)
                      ...++|||.|+|+..++|++|||||.  +++|.||.+.                                          
T Consensus        20 ~~~~~g~l~~~~~~~~~w~~rw~vl~--~~~~~~~~~~------------------------------------------   55 (228)
T 3tfm_A           20 SPYFHSFLYMNGGLMNSWKRRWCVLK--DETFLWFRSK------------------------------------------   55 (228)
T ss_dssp             -CCEEEEEEECCTTTCCCEEEEEEEE--TTEEEEESSC------------------------------------------
T ss_pred             CCceEEEEeecCcccccceEEEEEEe--CCEEEEeccC------------------------------------------
Confidence            35689999999999999999999999  7888777650                                          


Q ss_pred             EEeCChHHHHHHHHHHHhhhhhhccccCCCCChhhhhhhhCCCcceEEEEEEeCCCC----CCCcceEEEEEeCCeeEee
Q psy9639         136 VYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKN----ADAYRKRWFTLDYRKLMYH  211 (321)
Q Consensus       136 l~a~s~~e~~~W~~aLr~a~~~~l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~g~~~----~~~WkkRwfvL~~~~L~Yy  211 (321)
                                                               .+++++|||.|+|+..    .+.|++|||||+++.|+||
T Consensus        56 -----------------------------------------~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yy   94 (228)
T 3tfm_A           56 -----------------------------------------QEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYF   94 (228)
T ss_dssp             -----------------------------------------CCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEE
T ss_pred             -----------------------------------------CCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEE
Confidence                                                     1346899999998742    2689999999999999999


Q ss_pred             eCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhcc------------
Q psy9639         212 EEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGF------------  279 (321)
Q Consensus       212 k~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai------------  279 (321)
                      +++.+..|+|.|+|..+..   |...     ..++++|+|.+++|+|+|+|+|++|+++||.+|+.++            
T Consensus        95 k~~~~~~~~g~I~L~~~~~---v~~~-----~~k~~~F~I~t~~r~~~l~A~s~~e~~~Wv~aL~~~i~~~~~~~~~~~~  166 (228)
T 3tfm_A           95 ENDSEEKLKGTVEVRSAKE---IIDN-----TNKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHSSTDQEIREMHD  166 (228)
T ss_dssp             SSTTCCSEEEEEEGGGCSE---EEEE-----TTTTSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTCCHHHHTTCCC
T ss_pred             eCCCCcceeEEEEcCCCEE---eccC-----CCCCcEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHhccccchhhhhh
Confidence            9999999999999977532   2221     1457899999999999999999999999999999865            


Q ss_pred             ------------------------------ccccccCceEEEEecCCHHHHHHHHHHHHHh
Q psy9639         280 ------------------------------TFTLKTPQRWYQFSALSAPDRDQWIQAVQTV  310 (321)
Q Consensus       280 ------------------------------~~~l~~~~~~~~l~a~s~~e~~~Wi~al~~~  310 (321)
                                                    +|.+.++++.|.|+|+|++|+++|+.+||++
T Consensus       167 ~~~~~~~~~g~~~~~~i~s~~~~~~~~~~~~f~iit~~r~~~~~a~s~~e~~~Wi~~lq~~  227 (228)
T 3tfm_A          167 EQANPQNAVGTLDVGLIDSVCASDSPDRPNSFVIITANRVLHCNADTPEEMHHWITLLQRS  227 (228)
T ss_dssp             CCCCTTTCSEEEEGGGEEEEEECCCSSCTTEEEEEETTEEEEEECSSHHHHHHHHHHHCSC
T ss_pred             cccCcccccccCChhheeccccCCCCCCCCcEEEEeCCceEEEEcCCHHHHHHHHHHHhhc
Confidence                                          2556678889999999999999999999875

>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=99.91  E-value=2.1e-24  Score=173.32  Aligned_cols=111  Identities=21%  Similarity=0.328  Sum_probs=88.7

Q ss_pred             ChhhhhhhhCCCcceEEEEEEeCCCCCCCcceEEEEEe---CCeeEeeeC----CCCCCcceeEEcccccCceEEecCCC
Q psy9639         167 NDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLD---YRKLMYHEE----PLSAYPKGEIFLGHCSDGYTVRLGVP  239 (321)
Q Consensus       167 ~~~~l~~~~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~---~~~L~Yyk~----~~~~~~~g~i~L~~~~~~~~V~~~~~  239 (321)
                      ++++++|.+++...++|||.|+|+...+.||||||||+   +..|+||++    +.+..|.|.|+|..+   +.|..+.+
T Consensus         3 ~~~~~~~~~~~~~~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~---~~V~~~~~   79 (126)
T 1v5p_A            3 SGSSGMPYVDRQNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYI---SKVSIATP   79 (126)
T ss_dssp             CCCCSSCCCCCCCCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTC---CEEEECCT
T ss_pred             cccccCceecCCCceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCc---cEEecCCc
Confidence            45677888888999999999998544489999999999   667888898    567889999999764   45665443


Q ss_pred             CCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       240 ~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      ......+|||.|.++.|+|+|+|+|++||++||+||+.|+.
T Consensus        80 ~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~~  120 (126)
T 1v5p_A           80 KQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQASK  120 (126)
T ss_dssp             TTSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred             ccCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHh
Confidence            33234579999999999999888888888888888887764

>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.91  E-value=2.2e-24  Score=170.85  Aligned_cols=99  Identities=24%  Similarity=0.344  Sum_probs=86.1

Q ss_pred             CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeee----CCCCCCcceeEEcccccCceEEecCCCCC-CCCCCceEEEE
Q psy9639         178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHE----EPLSAYPKGEIFLGHCSDGYTVRLGVPPG-AKDQGFTFTLK  252 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk----~~~~~~~~g~i~L~~~~~~~~V~~~~~~~-~~~~~~~F~i~  252 (321)
                      ++.++|||+|+|+...+.||||||||+++.|+||+    ++.+..|.|.|+|    .+|+|..+.+.. ...++|+|+|+
T Consensus         7 n~~~~G~L~KqG~~~~K~WKrRwFVL~~~~LyYfk~~~~~~~~~~p~G~I~L----~g~tV~~~~~~~~~~~~k~~F~~v   82 (126)
T 1wi1_A            7 GMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQL----DGYTVDYTDPQPGLEGGRAFFNAV   82 (126)
T ss_dssp             CEEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCSSSSCCSEEEEC----SSCEEEECCCCSSCCSCSSEEEEE
T ss_pred             CCceeEEEEEeCCCcccccceEEEEEeCCEEEEEEcccccccCCCCceEEEC----CCcEEEEecCCcccccCceEEEEe
Confidence            56899999999986658999999999999999999    8989999999999    668887654433 23567999999


Q ss_pred             eCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         253 TPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       253 t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      +++++|+|+|+|++||+.||+||+.|+.
T Consensus        83 ~~~~ty~~~Adseee~~~WikAi~~A~~  110 (126)
T 1wi1_A           83 KEGDTVIFASDDEQDRILWVQAMYRATG  110 (126)
T ss_dssp             CSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             cCCceEEEEcCCHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999885

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}

Probab=99.89  E-value=4.7e-22  Score=175.67  Aligned_cols=165  Identities=18%  Similarity=0.354  Sum_probs=123.0

Q ss_pred             ccceeeEEEeecCCC-----CCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecC
Q psy9639          56 TGHMDGFLMKRGKES-----GKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDG  129 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~-----~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~  129 (321)
                      ...++|||.|+|+..     +.|++|||||.  ++.|.||++ .+..|+|.|+|.++..+...  .+.+++|+|.    +
T Consensus        57 ~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~--~~~L~Yyk~~~~~~~~g~I~L~~~~~v~~~--~~k~~~F~I~----t  128 (228)
T 3tfm_A           57 EALKQGWLHNNGGGSSTLSRRNWKKRWFVLR--QSKLMYFENDSEEKLKGTVEVRSAKEIIDN--TNKENGIDII----M  128 (228)
T ss_dssp             CSSEEEEEEECGGGCSSSCGGGCEEEEEEEC--SSEEEEESSTTCCSEEEEEEGGGCSEEEEE--TTTTSEEEEE----C
T ss_pred             CcceEEEEEEECCCcCCcccCCceEEEEEEe--CCEEEEEeCCCCcceeEEEEcCCCEEeccC--CCCCcEEEEE----c
Confidence            468999999999875     89999999999  999999999 88899999999998654322  2567888773    4


Q ss_pred             ceEEEEEEeCChHHHHHHHHHHHhhhhhhccccCCCCChhhhhhhhCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeE
Q psy9639         130 STRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLM  209 (321)
Q Consensus       130 ~~R~~~l~a~s~~e~~~W~~aLr~a~~~~l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~  209 (321)
                      +.|+|+|+|+|++++.+|+.+|+.+...         ...+... .. +                               
T Consensus       129 ~~r~~~l~A~s~~e~~~Wv~aL~~~i~~---------~~~~~~~-~~-~-------------------------------  166 (228)
T 3tfm_A          129 ADRTFHLIAESPEDASQWFSVLSQVHSS---------TDQEIRE-MH-D-------------------------------  166 (228)
T ss_dssp             SSCEEEEECSSHHHHHHHHHHHHHHHTC---------CHHHHTT-CC-C-------------------------------
T ss_pred             CCcEEEEEcCCHHHHHHHHHHHHHHHhc---------cccchhh-hh-h-------------------------------
Confidence            5699999999999999999999876432         1111100 00 0                               


Q ss_pred             eeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         210 YHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       210 Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                        .........|.+++..+..   +....   ....+..|.|+|++|+|+|+|+|+++++.||.+||.+
T Consensus       167 --~~~~~~~~~g~~~~~~i~s---~~~~~---~~~~~~~f~iit~~r~~~~~a~s~~e~~~Wi~~lq~~  227 (228)
T 3tfm_A          167 --EQANPQNAVGTLDVGLIDS---VCASD---SPDRPNSFVIITANRVLHCNADTPEEMHHWITLLQRS  227 (228)
T ss_dssp             --CCCCTTTCSEEEEGGGEEE---EEECC---CSSCTTEEEEEETTEEEEEECSSHHHHHHHHHHHCSC
T ss_pred             --cccCcccccccCChhheec---cccCC---CCCCCCcEEEEeCCceEEEEcCCHHHHHHHHHHHhhc
Confidence              0001123567888765422   22211   1236679999999999999999999999999999975

>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.89  E-value=8.1e-23  Score=168.49  Aligned_cols=122  Identities=13%  Similarity=0.124  Sum_probs=92.5

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCe
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQR  256 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r  256 (321)
                      .+++++|||.|+|+.. +.||+|||+|+++.|+||+++.+..+.|.|+|...    ++..... ......++|.|++++|
T Consensus        16 ~pv~keG~L~Kkg~~~-k~WkrRWFvLk~~~L~Yyk~~~d~~~~g~I~L~~~----~~~~~~~-~~~~~~~~F~I~t~~r   89 (149)
T 1x1f_A           16 LPLYFEGFLLIKRSGY-REYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDL----TCLTEQN-STEKNCAKFTLVLPKE   89 (149)
T ss_dssp             SCEEEEEEEEEECTTC-CSCEEEEEEEETTEEEEESCSSCSSCSEECCCSSC----CEEEECC-CTTSCCCEEEEECSSC
T ss_pred             CCccEEEEEEEeCCCC-CCceeEEEEEcCCEEEEEeCCCccccCcEEECCCc----eEEeecc-CCCCcCcEEEEEcCCC
Confidence            4589999999999887 89999999999999999999999999999999764    2221111 1123468999999999


Q ss_pred             EEEEEcCCHHHHHHHHHHHhhccccccccCceEEEEecCCHHHHHHHHHHH
Q psy9639         257 WYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAV  307 (321)
Q Consensus       257 ~~~f~A~s~~e~~~Wv~aL~~ai~~~l~~~~~~~~l~a~s~~e~~~Wi~al  307 (321)
                      +|+|+|+|++||++||.||+.++.......   ..+...-...+++|++.-
T Consensus        90 ~~~f~A~s~ee~~eWi~aI~~v~~~~~p~~---~~l~p~~~~~~~~~l~~~  137 (149)
T 1x1f_A           90 EVQLKTENTESGEEWRGFILTVTELSVPQN---VSLLPGQVIKLHEVLERE  137 (149)
T ss_dssp             CEEEECSSHHHHHHHHHHHHHHHHSSCCSS---CCCCHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHHHHHcccCCCc---cccCccchHHHHHHHHHH
Confidence            999999999999999999999875333321   113333344556665543

>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.88  E-value=1.6e-22  Score=158.74  Aligned_cols=98  Identities=17%  Similarity=0.222  Sum_probs=81.6

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCC---eeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEE
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYR---KLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLK  252 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~---~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~  252 (321)
                      +.+.+++|||+|++. . +.|++|||||+++   .|+||+++.+..|.|.|+|    .||+|....+.....++|+|+|.
T Consensus         5 ~~~~~~~G~L~k~~~-~-~~WkkrWfVL~~~~~~~Ly~Yk~~~d~~p~g~I~L----~g~~V~~~~~~~~~~~~~~Fki~   78 (112)
T 2coc_A            5 SSGSLLCGPLRLSES-G-ETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPL----PSCKLSVPDPEERLDSGHVWKLQ   78 (112)
T ss_dssp             CSSSSSEEEEEEESS-S-SCEEEEEEECCTTCTTCEEEECCTTCSSSCSEECG----GGCEEECCCSSSCCSSSEEEEEE
T ss_pred             cCCceEEEEEEecCC-C-CCceEEEEEEECCCccEEEEECCCCccCcceEEEc----CCCEEEecCcccccCCCCEEEEe
Confidence            346678899999865 4 7999999999985   7999999999999999999    57888754433333468999999


Q ss_pred             eCCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         253 TPQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       253 t~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +++++|+|+|+|+++|++||++|+.|+
T Consensus        79 ~~~~~y~f~A~s~e~~~~Wl~al~~A~  105 (112)
T 2coc_A           79 WAKQSWYLSASSAELQQQWLETLSTAA  105 (112)
T ss_dssp             ETTEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence            999999988888888888888888865

>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.88  E-value=2.3e-22  Score=162.22  Aligned_cols=94  Identities=21%  Similarity=0.363  Sum_probs=71.1

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-  255 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-  255 (321)
                      ..++++|||.|+| .. +.|++|||||+++.|+||+++.+..|+|.|+|.    +|+|.+..   ...++|||.|.++. 
T Consensus         6 ~~v~k~GwL~K~g-~~-k~WkrRWfVLk~~~L~yyk~~~~~~p~G~I~L~----~~~v~~~~---~~~~~~~F~i~~~~~   76 (130)
T 1v88_A            6 SGIVMADWLKIRG-TL-KSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLN----ACEIIERP---SKKDGFCFKLFHPLE   76 (130)
T ss_dssp             SSCCEEEEEEECC-SS-SSCEEEEEEEETTEEEEESCSSSCCCCEEEECS----SCEECCCC---TTTSSCEEEEECTTC
T ss_pred             CceEEEeEEEEeC-CC-CCceEEEEEEECCEEEEECCCCCCCceEEEEcC----CCEEEECC---CCCCCeEEEEEcCCc
Confidence            4678999999998 54 899999999999999999999999999999994    56664322   22456999999763 


Q ss_pred             -----------------------eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         256 -----------------------RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       256 -----------------------r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                                             ++|+|+|+|++|+++||+||+.|+
T Consensus        77 ~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~  123 (130)
T 1v88_A           77 QSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELAL  123 (130)
T ss_dssp             CCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHH
T ss_pred             cccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHH
Confidence                                   336655555555555555555554

>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}

Probab=99.88  E-value=1.8e-22  Score=153.32  Aligned_cols=91  Identities=21%  Similarity=0.267  Sum_probs=74.8

Q ss_pred             cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCe
Q psy9639         179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQR  256 (321)
Q Consensus       179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r  256 (321)
                      +.|+|||+|+|... ++|++|||+|+++.|+||+++.+  ..|.|.|+|..    +.+....     ..+++|.|.+++|
T Consensus         1 V~k~G~L~K~g~~~-k~WkkR~FvL~~~~L~Yy~~~~~~~~~~~~~i~l~~----~~~~~~~-----~~~~~F~i~~~~r   70 (94)
T 2rsg_A            1 VERCGVLSKWTNYI-HGWQDRWVVLKNNALSYYKSEDETEYGCRGSICLSK----AVITPHD-----FDECRFDISVNDS   70 (94)
T ss_dssp             CCEEEEEEEESSST-TCEEEEEEEEETTEEEEESSTTGGGTCCSEEEETTT----CEEEECS-----SCSSEEEEEETTE
T ss_pred             CCEEEEEEEeCCCC-CCceEEEEEEECCEEEEEEecccccccceeeEecce----eeeecCc-----ccceeEEEEeCCe
Confidence            47899999999887 89999999999999999998765  35889999954    4443321     3568999999999


Q ss_pred             EEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         257 WYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       257 ~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +|+|+|+|++|+++||.||++|.
T Consensus        71 ~~~l~A~s~~e~~~Wi~aLq~Ak   93 (94)
T 2rsg_A           71 VWYLRAQDPDHRQQWIDAIEQHK   93 (94)
T ss_dssp             EEEEECCSSCCTHHHHHHHHHHC
T ss_pred             EEEEECCCHHHHHHHHHHHHhhc
Confidence            99988888888888888887763

>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A

Probab=99.88  E-value=4.2e-22  Score=159.41  Aligned_cols=108  Identities=26%  Similarity=0.464  Sum_probs=82.0

Q ss_pred             CChhhhhhhhCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCC
Q psy9639         166 ANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQ  245 (321)
Q Consensus       166 ~~~~~l~~~~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~  245 (321)
                      .+++++.+.....++++|||.|+|+.. +.|++|||+|+++.|+||+++.+..|+|.|+|..+.   .|....   ...+
T Consensus         5 ~~~~~~~~~~~~~~~~~G~L~K~g~~~-~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~---~v~~~~---~~~~   77 (126)
T 1fao_A            5 RTEDDLVPTAPSLGTKEGYLTKQGGLV-KTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECS---AVQFDY---SQER   77 (126)
T ss_dssp             ----------CCTTCEEEEEEEECSSS-CCEEEEEEEEETTEEEEESSTTCSSCSEEEEGGGCC---EEEEEC---SSSS
T ss_pred             cCccccccCCCCCccEEEEEEEcCCCC-CCcccEEEEEECCEEEEeCCCCCCCceeEEEccceE---EEEecc---cCCC
Confidence            344566677778899999999999876 899999999999999999999999999999997652   233221   2346


Q ss_pred             CceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         246 GFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       246 ~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      +++|.|.+++|+|+|+|+|++++++||.+|+.+|.
T Consensus        78 ~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~  112 (126)
T 1fao_A           78 VNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLS  112 (126)
T ss_dssp             SSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence            79999999999999888888888888888877763

>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A

Probab=99.87  E-value=7.8e-22  Score=154.52  Aligned_cols=92  Identities=17%  Similarity=0.229  Sum_probs=69.7

Q ss_pred             CcceEEEEEEe-CCCCCC-CcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639         178 DFGREGWLWKT-GPKNAD-AYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ  255 (321)
Q Consensus       178 ~~~k~G~L~K~-g~~~~~-~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~  255 (321)
                      .++++|||.|+ ++.. + +||+|||||++.+|+|||++.+..++|.|+|    .++.|++..+. ...++|+|+|.+++
T Consensus        11 ~VirkGWL~k~~~g~~-k~~wk~rWFVLt~~~L~yyKd~~eke~~G~IpL----~~~~vr~v~~~-~~~rk~~F~l~~~d   84 (125)
T 1dyn_A           11 LVIRKGWLTINNIGIM-KGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSV----DNLKLRDVEKG-FMSSKHIFALFNTE   84 (125)
T ss_dssp             CEEEEEEEEESCCCGG-GTSSEEEEEEEESSEEEEESSTTCSCEEEEEEC----TTEEEEECCSC-SSSSCEEEEEEETT
T ss_pred             ceEEEEEEEEecCccc-cCCceeeEEEEeccceeeecCCcccccceEEEC----CCceEeccCCC-CCCCceEEEEECCC
Confidence            58999999995 4444 5 4999999999999999999999999999999    55778775433 23578999999875


Q ss_pred             --------eEEEEEcCCHHHHHHHHHHH
Q psy9639         256 --------RWYQFSALSAPDRDQWIQAV  275 (321)
Q Consensus       256 --------r~~~f~A~s~~e~~~Wv~aL  275 (321)
                              ++|.|+|+|.+|+++|+++|
T Consensus        85 ~r~v~~~h~~y~LsA~t~ee~~~Wi~s~  112 (125)
T 1dyn_A           85 QRNVYKDYRQLELACETQEEVDSWKASF  112 (125)
T ss_dssp             SSCSSTTCSSEEEEESSHHHHHHHHHHH
T ss_pred             CccccccceEEEEeCCCHHHHHHHHHHH
Confidence                    35554444444444444444

>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=99.87  E-value=1.8e-21  Score=151.85  Aligned_cols=96  Identities=21%  Similarity=0.329  Sum_probs=78.8

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-  255 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-  255 (321)
                      .+++++|||.|++... +.|++|||||+++.|+||+++.+..|.|.|+|..    +.+....+  ...++++|.|.+++ 
T Consensus         6 ~~~~~~G~L~K~~~~~-~~Wk~RwfvL~~~~L~yyk~~~~~~~~~~i~L~~----~~~~~~~~--~~~~~~~F~i~~~~~   78 (109)
T 1wgq_A            6 SGSTMSGYLYRSKGSK-KPWKHLWFVIKNKVLYTYAASEDVAALESQPLLG----FTVTLVKD--ENSESKVFQLLHKGM   78 (109)
T ss_dssp             CSCSCEEEEEEESSTT-SCCEEEEEEEETTEEEEESCTTCSSCSEEEECSS----EEEEECCC--SSCSSSEEEEEETTE
T ss_pred             CCCeEEEEEEeCCCCC-CCceeEEEEEeCCEEEEECCCCcCccCceEECCC----CEEEECCC--CCCCCcEEEEEeCCC
Confidence            4678999999998876 8999999999999999999999999999999954    44544332  12356999999875 


Q ss_pred             eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         256 RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       256 r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      |+|+|+|+|++++++||.+|+.|+
T Consensus        79 ~~~~~~a~s~~e~~~Wi~al~~a~  102 (109)
T 1wgq_A           79 VFYVFKADDAHSTQRWIDAFQEGT  102 (109)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             eEEEEECCCHHHHHHHHHHHHHHh
Confidence            789988888888888888888765

>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.87  E-value=1.1e-21  Score=154.62  Aligned_cols=98  Identities=20%  Similarity=0.368  Sum_probs=78.7

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe---
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT---  253 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t---  253 (321)
                      ..++++|||.|+|... +.|++|||+|+++.|+||+++.+..|+|.|+|..    +.|....+.....++++|.|.+   
T Consensus         6 ~~~~~~G~L~K~g~~~-~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~----~~v~~~~~~~~~~~~~~f~i~~~~~   80 (118)
T 1v89_A            6 SGPIKMGWLKKQRSIV-KNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPG----CTIKEIATNPEEAGKFVFEIIPASW   80 (118)
T ss_dssp             SCEEEEEEEEEECSSS-SCEEEEEEEEETTEEEEESSSSCCSCSEEECSTT----EEEEEECCCSSCCCCCEEEEEESCC
T ss_pred             CCCcEEEEEEecCCCC-CCccEEEEEEECCEEEEEeCCCCCCceEEEECCC----CEEEEcCcCcccCCcceEEEECCcc
Confidence            4678999999999876 8999999999999999999999999999999954    5554433222234679999998   


Q ss_pred             -----CCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         254 -----PQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       254 -----~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                           +.|+|+|+|+|++|+++||.+|+.++
T Consensus        81 ~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~  111 (118)
T 1v89_A           81 DQNRMGQDSYVLMASSQAEMEEWVKFLRRVA  111 (118)
T ss_dssp             SSCCSSCCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             ccccCCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence                 67999977777777777777777665

>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*

Probab=99.87  E-value=1.1e-21  Score=156.05  Aligned_cols=101  Identities=26%  Similarity=0.497  Sum_probs=84.1

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ  255 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~  255 (321)
                      ...++++|||.|+++...+.|++|||+|+++.|+||+++.+..|.|.|+|..    +.|....+......+|+|.|.+++
T Consensus         8 ~~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~----~~v~~~~~~~~~~~~~~f~i~~~~   83 (123)
T 1upq_A            8 NLPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPS----YNIRPDGPGAPRGRRFTFTAEHPG   83 (123)
T ss_dssp             TSCEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTTCCSCCEEEEGGG----CEEEECCSSCTTSSSSEEEEECTT
T ss_pred             CCCceEEEEEEeeCCCCCCCceeEEEEEeCCEEEEECCCCCcccceEEECCC----CEEEECCCCccCCCcEEEEEECCC
Confidence            3467899999999864348999999999999999999999999999999954    556554433333568999999886


Q ss_pred             -eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         256 -RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       256 -r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                       |+|+|+|+|++|++.||.+|+.++.
T Consensus        84 ~r~~~l~a~s~~e~~~Wi~al~~a~~  109 (123)
T 1upq_A           84 MRTYVLAADTLEDLRGWLRALGRASR  109 (123)
T ss_dssp             SCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred             CeEEEEECCCHHHHHHHHHHHHHHHh
Confidence             9999999999999999999988874

>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.87  E-value=1.6e-21  Score=157.28  Aligned_cols=101  Identities=17%  Similarity=0.342  Sum_probs=73.6

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEE-eCCeeEeeeCCCCCCcceeEEcccccCceEEe------cCCCCCCCCCCce
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTL-DYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVR------LGVPPGAKDQGFT  248 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL-~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~------~~~~~~~~~~~~~  248 (321)
                      ...++++|||.|+|... +.||+||||| +++.|+||+++.+..+.|.|.+....  ..|.      ...+.....++++
T Consensus         5 ~~~v~~~G~L~K~g~~~-k~WkkRwFVL~~~~~L~Yyk~~~~~~~~g~i~l~~~~--~~i~~~~~~~~v~~~~~~~~~~~   81 (130)
T 2d9v_A            5 SSGLVRGGWLWRQSSIL-RRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNV--RDIKVGQECQDVQPPEGRSRDGL   81 (130)
T ss_dssp             CCCEEEEEEEEEECSSS-CCEEEEEEEEETTTEEEEESSSSTTSEEEEEECTTTE--EEEEEGGGCSSCCCCSSCCTTTE
T ss_pred             CCceeEEEEEEeecCcc-CCceeeEEEEccCCEEEEEeCCCCCCcCceEecccce--eEEeccccccccCCCCCCCcCcE
Confidence            34678999999999876 8999999999 79999999999888899999875311  1121      1122222346799


Q ss_pred             EEEEeC-CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         249 FTLKTP-QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       249 F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      |.|.++ +|+|+|+|+|++||++||+||+.++
T Consensus        82 F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~  113 (130)
T 2d9v_A           82 LTVNLREGSRLHLCAETRDDAIAWKTALMEAN  113 (130)
T ss_dssp             EEEEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence            999995 5999966655555555555555554

>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.87  E-value=3.4e-21  Score=151.79  Aligned_cols=101  Identities=29%  Similarity=0.471  Sum_probs=81.3

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC-
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP-  254 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~-  254 (321)
                      ...++++|||.|+++...+.|++|||+|+++.|+||+++.+..|+|.|+|..    +.|....+.....++++|.|.++ 
T Consensus         8 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~----~~v~~~~~~~~~~~~~~F~i~~~~   83 (117)
T 2d9y_A            8 NAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLS----FRVAAVQPSDNISRKHTFKAEHAG   83 (117)
T ss_dssp             SCCCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTTCCSCCEEEECSS----CEEEECCTTTTCCCSSEEEEECSS
T ss_pred             CCCeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCCCCCcCCEEEeCC----eEEEEcCccccCCCccEEEEEcCC
Confidence            3477899999999854448999999999999999999999999999999965    44544333333456799999854 


Q ss_pred             CeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         255 QRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       255 ~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      +|+|+|+|+|++|+++||.+|+.++.
T Consensus        84 ~r~~~l~a~s~~e~~~Wi~al~~~~~  109 (117)
T 2d9y_A           84 VRTYFFSAESPEEQEAWIQAMGEAAR  109 (117)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred             CcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence            69999888888888888888888774

>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.87  E-value=2.6e-21  Score=151.78  Aligned_cols=98  Identities=22%  Similarity=0.348  Sum_probs=81.5

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-  255 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-  255 (321)
                      ..++++|||.|+|+.. +.|++|||+|+++.|+||+++.+..|+|.|+|..+    .+.... .....++++|.|.+++ 
T Consensus         3 ~~~~~~G~L~K~g~~~-~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~----~~~~~~-~~~~~~~~~F~i~~~~~   76 (113)
T 1pls_A            3 PKRIREGYLVKKGSVF-NTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGS----TLTSPC-QDFGKRMFVFKITTTKQ   76 (113)
T ss_dssp             CCCSEEEEEEEESSSS-SCCEEEEEEEETTEEEEESSTTCSSCSEEEESSSC----CEESSC-CSSCCSSSEEEEEETTT
T ss_pred             CCCcEEEEEEEeCCCC-CCceEEEEEEECCEEEEEeCCCCCCcceEEEcCCC----EEEEec-CCCCCCccEEEEEcCCC
Confidence            3678999999999877 89999999999999999999999999999999654    332211 1223567899999886 


Q ss_pred             eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         256 RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       256 r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      |+|+|+|+|++|+++||.+|+.+|.
T Consensus        77 r~~~l~a~s~~e~~~Wi~ai~~~~~  101 (113)
T 1pls_A           77 QDHFFQAAFLEERDAWVRDINKAIK  101 (113)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHHHHh
Confidence            9999999999999999999988885

>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1

Probab=99.86  E-value=3.8e-21  Score=151.51  Aligned_cols=101  Identities=31%  Similarity=0.552  Sum_probs=80.7

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEe--CCeeEeeeCCCCCCcceeEEcccccCceEEecCCCC----CCCCCCceE
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLD--YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP----GAKDQGFTF  249 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~--~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~----~~~~~~~~F  249 (321)
                      ...++++|||.|+|+.. +.|++|||+|+  ++.|+||+++.+..|+|.|+|..+.   .|....+.    ......++|
T Consensus         5 ~~~~~~~G~L~K~g~~~-~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~---~v~~~~~~~~~~~~~~~~~~F   80 (117)
T 1v5u_A            5 SSGRSYEGILYKKGAFM-KPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVE---AVAPGTPTIGAPKTVDEKAFF   80 (117)
T ss_dssp             CCSSSEEEEEEECCCSS-SCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEE---EEECCCCCTTSCSSSCTTTCE
T ss_pred             cCCccEEEEEEecCCCC-CCceeeEEEEECCCCEEEEeecCCCCccceEEEccCcE---EEeecCccccccccCCCCeEE
Confidence            45678999999999876 89999999999  8899999999999999999997642   23322110    112356899


Q ss_pred             EEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         250 TLKTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       250 ~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      .|.+++|+|+|+|+|++++++||.+|+.+|.
T Consensus        81 ~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~  111 (117)
T 1v5u_A           81 DVKTTRRVYNFCAQDVPSAQQWVDRIQSCLS  111 (117)
T ss_dssp             EEEESSCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred             EEECCCceEEEECCCHHHHHHHHHHHHHHhc
Confidence            9999999999888888888888888887764

>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.86  E-value=2.2e-21  Score=152.74  Aligned_cols=94  Identities=28%  Similarity=0.492  Sum_probs=75.6

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ  255 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~  255 (321)
                      ..+++++|||.|+++...+.|++|||+|+++.|+||+++.+..|+|.|+|..+   ..|...       .+++|.|.+++
T Consensus         5 ~~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~---~~v~~~-------~~~~F~i~~~~   74 (115)
T 2cod_A            5 SSGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAI---STVRVQ-------GDNKFEVVTTQ   74 (115)
T ss_dssp             CSCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSCCSSCCCEEETTTE---EEEEEE-------TTTEEEEEESS
T ss_pred             CCCccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCCCcccCCEEECCcc---eEEEeC-------CCCEEEEEeCC
Confidence            45788999999999833489999999999999999999999899999999764   234331       15899999999


Q ss_pred             eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         256 RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       256 r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      |+|+|+|+|++|+++||.+|+.++
T Consensus        75 r~~~l~a~s~~e~~~Wi~~l~~~~   98 (115)
T 2cod_A           75 RTFVFRVEKEEERNDWISILLNAL   98 (115)
T ss_dssp             CCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             cEEEEECCCHHHHHHHHHHHHHHH
Confidence            999966666666666666666665

>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}

Probab=99.86  E-value=1.4e-21  Score=156.52  Aligned_cols=104  Identities=22%  Similarity=0.448  Sum_probs=83.6

Q ss_pred             hCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC
Q psy9639         175 LTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP  254 (321)
Q Consensus       175 ~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~  254 (321)
                      ....++++|||.|+++...+.|++|||+|+++.|+||+++.+..|+|.|+|..    +.|..........++++|.|.++
T Consensus        17 ~~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~----~~v~~~~~~~~~~~~~~F~i~~~   92 (128)
T 2dkp_A           17 PNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPS----FQIALLTSEDHINRKYAFKAAHP   92 (128)
T ss_dssp             TTSCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTCCSEEEEECGGG----SEEEECCGGGCCSSCSEEEEECS
T ss_pred             CCCCcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCCcccceEEEcCc----eEEEEcCCcccCCCCeEEEEEcC
Confidence            34578999999999984348999999999999999999999999999999954    45544322222356799999998


Q ss_pred             C-eEEEEEcCCHHHHHHHHHHHhhccccc
Q psy9639         255 Q-RWYQFSALSAPDRDQWIQAVQTGFTFT  282 (321)
Q Consensus       255 ~-r~~~f~A~s~~e~~~Wv~aL~~ai~~~  282 (321)
                      + |+|+|+|+|++|+++||.+|+.|+...
T Consensus        93 ~~r~~~l~a~s~~e~~~Wi~al~~a~~~~  121 (128)
T 2dkp_A           93 NMRTYYFCTDTGKEMELWMKAMLDAALVQ  121 (128)
T ss_dssp             SSCCEEEECSSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence            5 999988888888888888888876533

>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.86  E-value=2.6e-21  Score=153.68  Aligned_cols=100  Identities=29%  Similarity=0.457  Sum_probs=79.5

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC-
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP-  254 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~-  254 (321)
                      ..+++++|||.|+++...+.|++|||+|+++.|+||+++.+..|.|.|+|..+    .|....+.....++++|.|.++ 
T Consensus        19 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~----~v~~~~~~~~~~~~~~F~i~~~~   94 (122)
T 2yry_A           19 NAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSF----RVAAVQPSDNISRKHTFKAEHAG   94 (122)
T ss_dssp             TCCEEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTCCSCCEEEESTTC----CCEECCTTCSCSSSSEEEEECSS
T ss_pred             CCCccEEEEEEEECCCCCCCcEEEEEEEeCCEEEEECCCCCCCcccEEEcCCC----EEEEcCccccCCcccEEEEecCC
Confidence            45689999999998644489999999999999999999999999999999654    3433322233356799999865 


Q ss_pred             CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         255 QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       255 ~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +|+|+|+|+|++++++||.+|+.|+
T Consensus        95 ~r~~~l~a~s~~e~~~Wi~al~~a~  119 (122)
T 2yry_A           95 VRTYFFSAESPEEQEAWIQAMGEAA  119 (122)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCHHHHHHHHHHHHHHH
Confidence            6999988887777777777777765

>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1

Probab=99.86  E-value=1.4e-21  Score=155.88  Aligned_cols=101  Identities=22%  Similarity=0.305  Sum_probs=83.7

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ  255 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~  255 (321)
                      ...++++|||.|+|... +.|++|||+|+++.|+||+++.+..|+|.|+|..+.   .|..+.......++++|.|.+++
T Consensus        11 ~~~~~~~G~L~K~g~~~-~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~---~v~~~~~~~~~~~~~~F~i~~~~   86 (125)
T 1eaz_A           11 DSAVIKAGYCVKQGAVM-KNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVH---KVQECKQSDIMMRDNLFEIVTTS   86 (125)
T ss_dssp             -CCCSEEEEEEEECTTT-CCEEEEEEEECSSEEEEESSTTCSSCSEEEEGGGCC---EEEECTTHHHHTCSSEEEEECSS
T ss_pred             CCCccEEEEEEEeCCCC-CCcceEEEEEeCCEEEEEcCCCCCcceeEEEcccce---EEeeccccccCCcCCEEEEEeCC
Confidence            45789999999999876 899999999999999999999999999999997652   34333211122457999999999


Q ss_pred             eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         256 RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       256 r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      |+|+|+|+|++|+++||.+|+.+|.
T Consensus        87 r~~~l~a~s~~e~~~W~~al~~~i~  111 (125)
T 1eaz_A           87 RTFYVQADSPEEMHSWIKAVSGAIV  111 (125)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEcCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999988874

>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=2.6e-21  Score=152.01  Aligned_cols=99  Identities=21%  Similarity=0.394  Sum_probs=83.2

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ  255 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~  255 (321)
                      ...++++|||.|++... +.|++|||+|+++.|+||+++.+..|+|.|+|..+   +.|....  +...++++|.|.+++
T Consensus         5 ~~~~~~~G~L~K~~~~~-~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~---~~v~~~~--~~~~~~~~F~i~~~~   78 (115)
T 2dn6_A            5 SSGVLKQGYMMKKGHRR-KNWTERWFVLKPNIISYYVSEDLKDKKGDILLDEN---CCVESLP--DKDGKKCLFLVKCFD   78 (115)
T ss_dssp             CCSCSEEEEEEEECTTS-SCEEEEEEEECSSCEEEESSTTCSSEEEEECCCTT---CEEEEEC--CCTTCCSEEEEECSS
T ss_pred             CCCceEEEEEEecCCCC-CCcEEeEEEEECCEEEEeCCCCCcccCcEEEecCc---EEEEECC--CCCCCeeEEEEEeCC
Confidence            34778999999999876 89999999999999999999999999999999754   3344322  122467899999999


Q ss_pred             eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         256 RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       256 r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      |+|+|+|+|++|+++||.+|+.++.
T Consensus        79 r~~~l~a~s~~e~~~Wi~ai~~~~~  103 (115)
T 2dn6_A           79 KTFEISASDKKKKQEWIQAIHSTIH  103 (115)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEcCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999988874

>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A

Probab=99.86  E-value=4.3e-21  Score=149.28  Aligned_cols=99  Identities=24%  Similarity=0.340  Sum_probs=77.7

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCC--eeEeeeCCCCCCcceeEEcccccCceEEecCCCC-C--CCCCCceEE
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYR--KLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP-G--AKDQGFTFT  250 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~--~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~-~--~~~~~~~F~  250 (321)
                      ..+++++|||.|+|+.. +.|++|||+|+++  .|+||+++.+..|+|.|+|..    +.|...... .  ..+.+++|.
T Consensus         4 ~~~~~~~G~L~K~g~~~-~~Wk~R~fvL~~~~~~L~yyk~~~~~~~~g~i~L~~----~~v~~~~~~~~~~~~~~~~~F~   78 (109)
T 2i5f_A            4 TGVIIKQGCLLKQGHRR-KNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRG----CVVTSVESNSNGRKSEEENLFE   78 (109)
T ss_dssp             CCCEEEEEEEEEECTTT-CCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTT----CEEEEECC--------CCSEEE
T ss_pred             cCceeEEEEEEEcCCCC-CCceEEEEEEeCCCcEEEEECCCCCCCccEEEECCC----CEEEEccCCcccccCCCceEEE
Confidence            45789999999999877 8999999999976  999999999999999999965    444332211 1  113679999


Q ss_pred             EEeCC-eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         251 LKTPQ-RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       251 i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      |.+++ ++|+|+|+|++|+++||.+|+.+|
T Consensus        79 i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~  108 (109)
T 2i5f_A           79 IITADEVHYFLQAATPKERTEWIKAIQMAS  108 (109)
T ss_dssp             EECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence            99985 789988888888888888887764

>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A

Probab=99.86  E-value=5.2e-21  Score=147.57  Aligned_cols=91  Identities=23%  Similarity=0.405  Sum_probs=76.2

Q ss_pred             eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC-CeE
Q psy9639         181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP-QRW  257 (321)
Q Consensus       181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~-~r~  257 (321)
                      ++|||+|+|... +.|++|||||+++.|+||+++.+  ..|+|.|+|.    ++.|....     ..+++|.|+++ +|+
T Consensus         1 ~eG~L~K~g~~~-k~Wk~R~fvL~~~~L~Yy~~~~~~~~~~~g~i~L~----~~~v~~~~-----~~~~~F~i~~~~~r~   70 (103)
T 3rcp_A            1 MEGVLYKWTNYL-TGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMA----VCEIKVHS-----ADNTRMELIIPGEQH   70 (103)
T ss_dssp             CEEEEEEECCTT-TCEEEEEEEEETTEEEEESSCC---CCCSCEEEGG----GCEEECCT-----TCSSEEEEEETTTEE
T ss_pred             CceEEEEccCCC-CCeeceEEEEECCEEEEEecCCcccCCcccEEEee----eeEEEEcC-----CCCceEEEEeCCCCE
Confidence            489999999887 89999999999999999999985  3599999994    45665422     24689999997 799


Q ss_pred             EEEEcCCHHHHHHHHHHHhhcccc
Q psy9639         258 YQFSALSAPDRDQWIQAVQTGFTF  281 (321)
Q Consensus       258 ~~f~A~s~~e~~~Wv~aL~~ai~~  281 (321)
                      |+|+|+|++|+++||.+|+.|+..
T Consensus        71 ~~l~a~s~~e~~~Wi~al~~a~~~   94 (103)
T 3rcp_A           71 FYMKAVNAAERQRWLVALGSSKAS   94 (103)
T ss_dssp             EEEECSSHHHHHHHHHHHHTTSCC
T ss_pred             EEEECCCHHHHHHHHHHHHHHHHh
Confidence            999999999999999999888853

>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}

Probab=99.85  E-value=4.5e-21  Score=160.91  Aligned_cols=106  Identities=20%  Similarity=0.198  Sum_probs=82.1

Q ss_pred             hCCCcceEEEEEEeCCCC----CCCcceEEEEEeCCeeEeeeCCCC-CCcceeEEcccccCceEEecCCCCCCCCCCceE
Q psy9639         175 LTRDFGREGWLWKTGPKN----ADAYRKRWFTLDYRKLMYHEEPLS-AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTF  249 (321)
Q Consensus       175 ~~~~~~k~G~L~K~g~~~----~~~WkkRwfvL~~~~L~Yyk~~~~-~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F  249 (321)
                      +..+++++|||.|+|...    .++||+|||||+++.|+||+++.+ ..++|.|+|..+..+..+............++|
T Consensus        11 m~~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f   90 (164)
T 2lul_A           11 MNFNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPF   90 (164)
T ss_dssp             CCSSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEE
T ss_pred             CCCCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCcccccccEEEEeeeEEEEeccccccCcccccceeE
Confidence            456899999999998653    246999999999999999998754 467999999875332222111111122356899


Q ss_pred             EEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         250 TLKTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       250 ~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      .|++++|+|+|+|+|++|+++||+||+++|.
T Consensus        91 ~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~  121 (164)
T 2lul_A           91 QVVHDANTLYIFAPSPQSRDLWVKKLKEEIK  121 (164)
T ss_dssp             EEECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             EEecCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999883

>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=3.5e-21  Score=152.82  Aligned_cols=96  Identities=26%  Similarity=0.346  Sum_probs=80.3

Q ss_pred             CCcceEEEEEEeCCC-CCCCcceEEEEEeCC--eeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe
Q psy9639         177 RDFGREGWLWKTGPK-NADAYRKRWFTLDYR--KLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT  253 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~-~~~~WkkRwfvL~~~--~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t  253 (321)
                      .+++++|||.|+|+. ..+.|++|||||+++  .|+||+++.+..|+|.|+|..+    .+....    ...+++|.|.+
T Consensus         6 ~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~----~~~~~~----~~~~~~F~i~~   77 (119)
T 2dhk_A            6 SGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSA----VFDCKA----DAEEGIFEIKT   77 (119)
T ss_dssp             SCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTCCSCSEEEEGGGC----EEEECT----TGGGCEEEEEC
T ss_pred             CCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCCcccccEEECCCC----EEEecC----CCCCCEEEEEe
Confidence            467889999999972 237999999999998  9999999999999999999654    332211    13468999999


Q ss_pred             CCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         254 PQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       254 ~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      ++|+|+|+|+|++|+++||.+|+.++.
T Consensus        78 ~~r~~~l~a~s~~e~~~Wi~al~~~~~  104 (119)
T 2dhk_A           78 PSRVITLKAATKQAMLYWLQQLQMKRW  104 (119)
T ss_dssp             SSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999998874

>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A

Probab=99.85  E-value=2.6e-21  Score=151.55  Aligned_cols=101  Identities=19%  Similarity=0.335  Sum_probs=76.4

Q ss_pred             CcceEEEEEEeCCCCCCCcceEEEEE-eCCeeEeeeCCCCCCcceeEEcccccCc----eEEecCCCCCCCCCCceEEEE
Q psy9639         178 DFGREGWLWKTGPKNADAYRKRWFTL-DYRKLMYHEEPLSAYPKGEIFLGHCSDG----YTVRLGVPPGAKDQGFTFTLK  252 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~~~~WkkRwfvL-~~~~L~Yyk~~~~~~~~g~i~L~~~~~~----~~V~~~~~~~~~~~~~~F~i~  252 (321)
                      .++++|||.|+|+.. +.|++||||| .++.|+||+++.+..+.|.|+|....-.    ..|....+.....++++|.|.
T Consensus         4 ~~~~~G~L~K~g~~~-k~WkkR~fvL~~~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~   82 (112)
T 3aj4_A            4 AFVKSGWLLRQSTIL-KRWKKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQIV   82 (112)
T ss_dssp             SCSEEEEEEEECSSS-CCEEEEEEEECTTSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEEE
T ss_pred             ceeEEEEEEeeCCCC-CCeeceEEEEeeCCEEEEEcCCCCCCCCccccccccceeecccccccccCCCCCCCcCcEEEEE
Confidence            578999999999876 8999999999 8999999999999899999999653100    011111122222336899999


Q ss_pred             eC-CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         253 TP-QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       253 t~-~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ++ +|+|+|+|+|++|+++||.||+.|.
T Consensus        83 ~~~~r~~~l~a~s~~e~~~Wi~al~~a~  110 (112)
T 3aj4_A           83 CRDGKTISLCAESTDDCLAWKFTLQDSR  110 (112)
T ss_dssp             ETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             ecCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence            76 7999988777777777777777664

>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A

Probab=99.85  E-value=1e-20  Score=155.86  Aligned_cols=111  Identities=24%  Similarity=0.401  Sum_probs=87.9

Q ss_pred             cCCCCChhhhhhhhCCCcceEEEEEEeCCCC---CCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCC
Q psy9639         162 AFPSANDSELVKLLTRDFGREGWLWKTGPKN---ADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV  238 (321)
Q Consensus       162 ~~p~~~~~~l~~~~~~~~~k~G~L~K~g~~~---~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~  238 (321)
                      +.|.....++     .+++++|||.|+|+..   .+.|++|||+|+++.|+||+++.+..|+|.|+|..    +.|....
T Consensus         5 ~~p~~~~~~~-----~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~~~g~i~L~~----~~v~~~~   75 (148)
T 1u5f_A            5 GSPGIPAQDL-----PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDG----YDVRMNN   75 (148)
T ss_dssp             CCCCCCGGGC-----SSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTCSSCSEEEECTT----CEEEECT
T ss_pred             CCCCCChhhC-----CCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCCCcccceEEEcCC----cEEEECC
Confidence            3455544442     5789999999998653   26999999999999999999999999999999954    4454322


Q ss_pred             CC-CCCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhcccc
Q psy9639         239 PP-GAKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGFTF  281 (321)
Q Consensus       239 ~~-~~~~~~~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai~~  281 (321)
                      .. ....++++|.|.+++ |+|+|+|+|++++++||.+|+.++..
T Consensus        76 ~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~  120 (148)
T 1u5f_A           76 TLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQD  120 (148)
T ss_dssp             TSCSSTTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC-
T ss_pred             CcccCCCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence            11 122346999999986 99999999999999999999999853

>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*

Probab=99.85  E-value=6.9e-21  Score=152.09  Aligned_cols=71  Identities=31%  Similarity=0.535  Sum_probs=59.0

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ  255 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~  255 (321)
                      .+++++|||.|+|+.. +.|++|||+|+++.|+||+++.+..|+|.|+|..    +.|.....   ..++++|.|.+++
T Consensus         3 ~~~~~~G~L~K~g~~~-~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~----~~v~~~~~---~~~~~~f~i~~~~   73 (127)
T 1fgy_A            3 FNPDREGWLLKLGGRV-KTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLEN----LSIREVLD---PRKPNCFELYNPS   73 (127)
T ss_dssp             SSCSEEEEEEEECSSS-CCEEEEEEEEETTEEEEESSTTCSSCSEEEECTT----CEEEEECC---SSCSSEEEEECSS
T ss_pred             CCCceEeEEEEECCCC-CCeEEEEEEEECCEEEEeCCCCCCCcceEEECCc----eEEEEccC---CCCCceEEEecCC
Confidence            3678999999999887 8999999999999999999999999999999965    44544321   2567999999764

>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A

Probab=99.85  E-value=4.9e-21  Score=153.76  Aligned_cols=102  Identities=23%  Similarity=0.320  Sum_probs=80.0

Q ss_pred             hCCCcceEEEEEEeCCCCCCCcceEEEEEeCC--eeEeeeCCCCCCcceeEEcccccCceEEecCCCC-C--CCCCCceE
Q psy9639         175 LTRDFGREGWLWKTGPKNADAYRKRWFTLDYR--KLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP-G--AKDQGFTF  249 (321)
Q Consensus       175 ~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~--~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~-~--~~~~~~~F  249 (321)
                      +...++++|||.|+|... +.|++|||||+++  .|+||+++.+..|+|.|+|..    +.|...... .  ..+++++|
T Consensus        14 ~~~~~~~~G~L~K~g~~~-~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~----~~v~~~~~~~~~~~~~~~~~F   88 (129)
T 1x05_A           14 FRGVIIKQGCLLKQGHRR-KNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRG----CVVTSVESNSNGRKSEEENLF   88 (129)
T ss_dssp             TCSEEEEEEEEEECCSSC-CCCEEEEEEEEETTTEEEEECSSCCSSCSEEEECTT----CEEEECCCCCCSSSCSSCSEE
T ss_pred             ccCCceEEEEEEecCCCC-CCCeeEEEEEeCCCCEEEEECCCCCCcceeEEEccC----CEEEEccCCccccccCCCeEE
Confidence            456789999999999876 8999999999975  899999999999999999965    444432211 1  11367999


Q ss_pred             EEEeCC-eEEEEEcCCHHHHHHHHHHHhhcccc
Q psy9639         250 TLKTPQ-RWYQFSALSAPDRDQWIQAVQTGFTF  281 (321)
Q Consensus       250 ~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai~~  281 (321)
                      .|.+++ |+|+|+|+|++++++||.||+.++..
T Consensus        89 ~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~  121 (129)
T 1x05_A           89 EIITADEVHYFLQAATPKERTEWIKAIQMASRT  121 (129)
T ss_dssp             EEECTTCCCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred             EEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHc
Confidence            999975 78997777777777777777777643

>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*

Probab=99.85  E-value=2.3e-21  Score=163.44  Aligned_cols=100  Identities=19%  Similarity=0.213  Sum_probs=78.9

Q ss_pred             CcceEEEEEEeCCCC----CCCcceEEEEEeCCeeEeeeC----CCCCCcceeEEcccccCceEEecCCC--CCCCCC--
Q psy9639         178 DFGREGWLWKTGPKN----ADAYRKRWFTLDYRKLMYHEE----PLSAYPKGEIFLGHCSDGYTVRLGVP--PGAKDQ--  245 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~----~~~WkkRwfvL~~~~L~Yyk~----~~~~~~~g~i~L~~~~~~~~V~~~~~--~~~~~~--  245 (321)
                      +++++|||.|+|...    .+.||+|||||+++.|+||++    +.+..++|.|+|..+   ..|....+  ......  
T Consensus         2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~---~~ve~~~~~~~~~~~~~~   78 (169)
T 1btk_A            2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKI---TCVETVVPEKNPPPERQI   78 (169)
T ss_dssp             CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGE---EEEEECCCCSSCCGGGCC
T ss_pred             ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcce---EEEEeccCCCCcchhccc
Confidence            578999999987532    368999999999999999998    567789999999764   22333311  111111  


Q ss_pred             -------------------CceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         246 -------------------GFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       246 -------------------~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                                         +++|+|++++|+|+|+|+|++|+++||++|+.+|.
T Consensus        79 ~~~~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~aI~~~i~  132 (169)
T 1btk_A           79 PRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIR  132 (169)
T ss_dssp             ---------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred             ccccCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHH
Confidence                               18999999999999999999999999999999884

>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*

Probab=99.85  E-value=1e-20  Score=152.45  Aligned_cols=99  Identities=18%  Similarity=0.319  Sum_probs=76.3

Q ss_pred             CCCcceEEEEEEe----CC-CCCCCcceEEEEEeCCeeEeeeCCC-----------CCCcceeEEcccccCceEEecCCC
Q psy9639         176 TRDFGREGWLWKT----GP-KNADAYRKRWFTLDYRKLMYHEEPL-----------SAYPKGEIFLGHCSDGYTVRLGVP  239 (321)
Q Consensus       176 ~~~~~k~G~L~K~----g~-~~~~~WkkRwfvL~~~~L~Yyk~~~-----------~~~~~g~i~L~~~~~~~~V~~~~~  239 (321)
                      ..+++++|||.|+    ++ ...+.|++|||||+++.|+||+++.           +..|.|.|+|.    +|.|.... 
T Consensus         9 ~~~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~----~~~v~~~~-   83 (129)
T 2p0d_A            9 SHEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLR----GAALAHGR-   83 (129)
T ss_dssp             CCSEEEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC--------------CCSEEEECT----TCEEEECT-
T ss_pred             CcceeEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeC----CcEEEECC-
Confidence            4578899999995    33 2337999999999999999999983           56899999994    56665432 


Q ss_pred             CCCCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         240 PGAKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       240 ~~~~~~~~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                       ....++|+|+|.+++ ++|+|+|+|++||++||.+|+.+|.
T Consensus        84 -~~~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~  124 (129)
T 2p0d_A           84 -HLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIE  124 (129)
T ss_dssp             -TSCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred             -CCCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence             223467999999875 8999888888888888888887763

>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A

Probab=99.84  E-value=1.3e-20  Score=149.75  Aligned_cols=97  Identities=18%  Similarity=0.166  Sum_probs=75.7

Q ss_pred             cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCC---CCCcceeEEcccccCceEEecCCCCCC------CCCCceE
Q psy9639         179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPL---SAYPKGEIFLGHCSDGYTVRLGVPPGA------KDQGFTF  249 (321)
Q Consensus       179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~---~~~~~g~i~L~~~~~~~~V~~~~~~~~------~~~~~~F  249 (321)
                      ++++|||+|++... ++|++|||||+++.|+||+++.   +..|.|+|+|    .+|.|........      ....+.|
T Consensus         6 ~~k~G~L~Kk~~~~-k~W~~rwfVL~~~~L~yyK~~~~~~d~~P~gsI~L----~~c~v~~~~~~~~~~~~~~~~~~~~F   80 (120)
T 4a6h_A            6 EIKSGFLERRSKFL-KSYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLAL----SECTVTEHSRKNSTSSPNSTGSDAKF   80 (120)
T ss_dssp             CSEEEEEEEEETTT-TEEEEEEEEECSSEEEEESSCCTTTCCSCSEEEEG----GGEEEEEECCCCC---------CCEE
T ss_pred             ccEEEEEEEcCCCC-CCCccEEEEEeCCEEEEEcCCCcCcCCCceEEEEC----CCCEEEEcccccccccccccCCCcEE
Confidence            78999999999876 8999999999999999999875   6679999999    4577776432211      0156789


Q ss_pred             EEEeCC-------eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         250 TLKTPQ-------RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       250 ~i~t~~-------r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      .|.+.+       ++|+|+|+|.+||++||++|+.+++
T Consensus        81 ~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~~  118 (120)
T 4a6h_A           81 VLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILTS  118 (120)
T ss_dssp             EEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred             EEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHhc
Confidence            998754       6899888888888888888777653

>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1

Probab=99.84  E-value=4.6e-21  Score=148.55  Aligned_cols=98  Identities=22%  Similarity=0.466  Sum_probs=77.7

Q ss_pred             CcceEEEEEEeCCCC---CCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCC-CCCCCCCceEEEEe
Q psy9639         178 DFGREGWLWKTGPKN---ADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP-PGAKDQGFTFTLKT  253 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~---~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~-~~~~~~~~~F~i~t  253 (321)
                      +++++|||.|+++..   .+.|++|||+|+++.|+||+++.+..|+|.|+|..    +.|..... ......+++|.|.+
T Consensus         2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~----~~v~~~~~~~~~~~~~~~F~i~~   77 (108)
T 1u5d_A            2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKG----YSVRMAPHLRRDSKKESCFELTS   77 (108)
T ss_dssp             CEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTCSSCSEEEECTT----CEEEECGGGCSSGGGGGEEEEEC
T ss_pred             CccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCCCCCCCEEEEecc----eEEEeCCccccccCCcceEEEEc
Confidence            578999999998542   26899999999999999999999999999999965    44443211 12224579999999


Q ss_pred             CC-eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         254 PQ-RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       254 ~~-r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ++ |+|+|+|+|++|+++||.+|+.+|
T Consensus        78 ~~~r~~~l~a~s~~e~~~Wi~ai~~~i  104 (108)
T 1u5d_A           78 QDRRTYEFTATSPAEARDWVDQISFLL  104 (108)
T ss_dssp             SSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence            87 999988888888888888887765

>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A

Probab=99.83  E-value=6.5e-21  Score=152.55  Aligned_cols=97  Identities=15%  Similarity=0.298  Sum_probs=73.7

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC---------CCcceeEEcccccCceEEecCCCCCCCCCCc
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS---------AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGF  247 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~---------~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~  247 (321)
                      ..++++|||+|+|+.. +.|++|||||+++.|+||+++.+         ..++|.|+|.    +|.|.... .....++|
T Consensus        10 ~~~~k~G~L~K~g~~~-k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~----~~~v~~~~-~~~~~k~~   83 (124)
T 2w2x_D           10 DEHKQQGELYMWDSID-QKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLN----TYNVVKAP-QGKNQKSF   83 (124)
T ss_dssp             ---CCEEEEEEEETTT-TEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGG----GEEEEECT-TCBTTBSE
T ss_pred             hhcceeEEEEEECCCC-CCceEeEEEEECCEEEEEcccccccccccccCCccccEEECC----CCEEEEcc-CCcCCCCE
Confidence            3678999999999877 89999999999999999997421         3458999995    46666533 22235679


Q ss_pred             eEEEEeC---CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         248 TFTLKTP---QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       248 ~F~i~t~---~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +|+|.++   .++|+|+|+|++|+++||.||+.++
T Consensus        84 ~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~  118 (124)
T 2w2x_D           84 VFILEPKQQGDPPVEFATDKVEELFEWFQSIREIT  118 (124)
T ss_dssp             EEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHH
Confidence            9999986   4789977777777777777777765

>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=4.2e-20  Score=145.45  Aligned_cols=96  Identities=17%  Similarity=0.230  Sum_probs=76.0

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ  255 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~  255 (321)
                      ...++++|||.|++....+.|++|||||+++.|+||+++.+. +.+.|.+..    +.|...   .  ..+++|.|.+++
T Consensus         7 ~~~~~~~G~L~K~~~~~~k~WkkR~fvL~~~~L~yyk~~~~~-~~~~i~l~~----~~v~~~---~--~~~~~F~I~~~~   76 (114)
T 2da0_A            7 GYGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSNR-QPAKLNLLT----CQVKPN---A--EDKKSFDLISHN   76 (114)
T ss_dssp             CCCSCEEEEEEEECSSSCCCEEEEEEEEETTEEEECCSSCCS-CCEEEETTT----SEEEEC---S--SSSSCEEEEETT
T ss_pred             CCCccEEEEEEEeCCCCCCCceeEEEEEeCCEEEEEcCCCCC-CCCEEEeee----eEEEEC---C--CCCCEEEEEcCC
Confidence            346789999999997544799999999999999999998764 556666633    345421   1  356899999999


Q ss_pred             eEEEEEcCCHHHHHHHHHHHhhcccc
Q psy9639         256 RWYQFSALSAPDRDQWIQAVQTGFTF  281 (321)
Q Consensus       256 r~~~f~A~s~~e~~~Wv~aL~~ai~~  281 (321)
                      |+|+|+|+|++|+++||.||+.++..
T Consensus        77 r~~~l~a~s~~e~~~Wi~al~~~~~~  102 (114)
T 2da0_A           77 RTYHFQAEDEQDYVAWISVLTNSKEE  102 (114)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence            99998888888888888888887743

>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.83  E-value=2.3e-20  Score=149.70  Aligned_cols=99  Identities=27%  Similarity=0.355  Sum_probs=70.9

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEe--CCeeEeeeCC-CCCCcceeEEcccccCceEEecCCCC----CCC--CCC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLD--YRKLMYHEEP-LSAYPKGEIFLGHCSDGYTVRLGVPP----GAK--DQG  246 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~--~~~L~Yyk~~-~~~~~~g~i~L~~~~~~~~V~~~~~~----~~~--~~~  246 (321)
                      ...++++|||.|+|... +.|++|||+|+  +..|+||+++ .+..|+|.|+|..    |.|......    ...  .++
T Consensus        15 ~~~~~~~G~L~K~g~~~-~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~----~~v~~~~~~~~p~~~~~~~~~   89 (129)
T 1x1g_A           15 SGTVVKQGYLAKQGHKR-KNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRG----SLVSALEDNGVPTGVKGNVQG   89 (129)
T ss_dssp             CSEEEEEEEEEEECSSS-SSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTT----CCCEECCSSSSCSSCSSCCCS
T ss_pred             CCCEEEEEEEEEECCCC-CCeeeEEEEEeCCCCeEEEeCCCCcCCccceEEECcC----CEEEEeCCCCCcccccCCCCC
Confidence            45789999999999886 89999999999  4799999998 7888999999965    333332211    111  157


Q ss_pred             ceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         247 FTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       247 ~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ++|.|.+++ |+|+|+|+|++|+++||.+|+.++
T Consensus        90 ~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~  123 (129)
T 1x1g_A           90 NLFKVITKDDTHYYIQASSKAERAEWIEAIKKLT  123 (129)
T ss_dssp             SCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHS
T ss_pred             ceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence            899999986 789944444444444444444443

>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=6.1e-21  Score=151.58  Aligned_cols=94  Identities=22%  Similarity=0.370  Sum_probs=78.4

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEe--CCeeEeeeCCCCC--CcceeEEcccccCceEEecCCCCCCCCCCceEEEE
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLD--YRKLMYHEEPLSA--YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLK  252 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~--~~~L~Yyk~~~~~--~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~  252 (321)
                      ..++++|||.|++... +.|++|||||+  ++.|+||+++.+.  .|+|.|+|..    +.|...     ...+++|.|.
T Consensus         6 ~~~~~~G~L~K~~~~~-~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~----~~v~~~-----~~~~~~F~i~   75 (120)
T 2d9x_A            6 SGENVYGYLMKYTNLV-TGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAG----AVISPS-----DEDSHTFTVN   75 (120)
T ss_dssp             SCCCCEEEEEEEEETT-TEEEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTT----CCEECC-----SSSSSCEEEC
T ss_pred             CCCcEEEEEEecCCCC-CCceEEEEEEECCCCEEEEEecCcccCCCccceEEcce----EEEEec-----CCCCCEEEEE
Confidence            3568999999999766 89999999999  5799999988764  7899999965    345432     1356899999


Q ss_pred             eCC-eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         253 TPQ-RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       253 t~~-r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      +++ |+|+|+|+|++|+++||.+|+.++.
T Consensus        76 ~~~~r~~~l~a~s~~e~~~Wi~al~~~~~  104 (120)
T 2d9x_A           76 AASGEQYKLRATDAKERQHWVSRLQICTQ  104 (120)
T ss_dssp             CSSSCCEEECCSSHHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence            986 9999999999999999999998873

>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B

Probab=99.83  E-value=3.4e-20  Score=145.69  Aligned_cols=95  Identities=16%  Similarity=0.250  Sum_probs=72.5

Q ss_pred             eEEEEEEeCCC---CCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceE-EecCCCCCCCCCCceEEEEeC-C
Q psy9639         181 REGWLWKTGPK---NADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYT-VRLGVPPGAKDQGFTFTLKTP-Q  255 (321)
Q Consensus       181 k~G~L~K~g~~---~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~-V~~~~~~~~~~~~~~F~i~t~-~  255 (321)
                      ++|||.|+++.   ..+.|++|||||+++.|+||+++.+..|.|.|+|...  .|. +..   .....++|+|+|.++ .
T Consensus         2 keG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~~~~p~~~i~l~~~--~~~~~~~---~~~~~r~~~F~l~~~~~   76 (112)
T 3cxb_B            2 KEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTDVIPLLSVNMGGE--QCGGCRR---ANTTDRPHAFQVILSDR   76 (112)
T ss_dssp             EEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSSCCSCSEEEETTC---CEEEEEE---CCCSSCTTEEEEEETTS
T ss_pred             ceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCCCCCccceEEecCC--EEEeeec---cCCCCCCeEEEEEcCCC
Confidence            79999977542   3489999999999999999999999999999999642  122 111   122357899999965 7


Q ss_pred             eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         256 RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       256 r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      ++|+|+|+|+++|++||++|+.+|.
T Consensus        77 ~~y~f~A~s~ee~~~Wi~ai~~~~~  101 (112)
T 3cxb_B           77 PCLELSAESEAEMAEWMQHLCQAVS  101 (112)
T ss_dssp             CCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             CEEEEEcCCHHHHHHHHHHHHHHhh
Confidence            8999777777777777777777664

>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.83  E-value=3.5e-20  Score=146.75  Aligned_cols=97  Identities=19%  Similarity=0.258  Sum_probs=79.7

Q ss_pred             cccceeeEEEeecCC-CCCceeeEEEEeccCCeEEeec----C-CCCCceeEEeccceEEEe---ccCCCCCCceeEEEE
Q psy9639          55 ITGHMDGFLMKRGKE-SGKYHPRRFVLNEINDTIKYYV----K-EKKEPKATLRISELNVVI---APSKIEHPHSLQLTF  125 (321)
Q Consensus        55 ~~~~~~G~L~K~g~~-~~~wk~R~fvL~~~~~~L~Yy~----~-~~~~pkg~I~l~~~~~~~---~~~~~~~~~~~~i~~  125 (321)
                      ++..++|||+|+|+. .++||||||||.  ++.|.||+    + .+.+|.|+|.|.++.+..   .++..+..+.|.+. 
T Consensus         6 ~n~~~~G~L~KqG~~~~K~WKrRwFVL~--~~~LyYfk~~~~~~~~~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v-   82 (126)
T 1wi1_A            6 SGMKHSGYLWAIGKNVWKRWKKRFFVLV--QVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAV-   82 (126)
T ss_dssp             CCEEEEEEEEEECSSSCCSCEEEEEEEE--EEETTEEEEEECCSSSSCCSEEEECSSCEEEECCCCSSCCSCSSEEEEE-
T ss_pred             CCCceeEEEEEeCCCcccccceEEEEEe--CCEEEEEEcccccccCCCCceEEECCCcEEEEecCCcccccCceEEEEe-
Confidence            366899999999985 589999999999  89999999    7 889999999999986532   23335667777653 


Q ss_pred             eecCceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         126 MKDGSTRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       126 ~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                         ...++|+|.|+|++|+.+||.+|..+..+
T Consensus        83 ---~~~~ty~~~Adseee~~~WikAi~~A~~~  111 (126)
T 1wi1_A           83 ---KEGDTVIFASDDEQDRILWVQAMYRATGQ  111 (126)
T ss_dssp             ---CSSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred             ---cCCceEEEEcCCHHHHHHHHHHHHHHhcc
Confidence               33467999999999999999999887654

>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=99.82  E-value=1.4e-19  Score=141.00  Aligned_cols=97  Identities=14%  Similarity=0.269  Sum_probs=83.3

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHI  134 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~  134 (321)
                      ...++|||+|+|+..+.|++|||||.  ++.|.||++ .+..|+|.|+|.++..+........+++|+|..   ...|+|
T Consensus         7 ~~~~~G~L~K~~~~~~~Wk~RwfvL~--~~~L~yyk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~---~~~~~~   81 (109)
T 1wgq_A            7 GSTMSGYLYRSKGSKKPWKHLWFVIK--NKVLYTYAASEDVAALESQPLLGFTVTLVKDENSESKVFQLLH---KGMVFY   81 (109)
T ss_dssp             SCSCEEEEEEESSTTSCCEEEEEEEE--TTEEEEESCTTCSSCSEEEECSSEEEEECCCSSCSSSEEEEEE---TTEEEE
T ss_pred             CCeEEEEEEeCCCCCCCceeEEEEEe--CCEEEEECCCCcCccCceEECCCCEEEECCCCCCCCcEEEEEe---CCCeEE
Confidence            46789999999998999999999999  999999999 889999999999997665444445678888752   446899


Q ss_pred             EEEeCChHHHHHHHHHHHhhhhh
Q psy9639         135 YVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      +|+|+|++++.+|+.+|+.+...
T Consensus        82 ~~~a~s~~e~~~Wi~al~~a~~~  104 (109)
T 1wgq_A           82 VFKADDAHSTQRWIDAFQEGTVS  104 (109)
T ss_dssp             EEECSSHHHHHHHHHHHHHHHSC
T ss_pred             EEECCCHHHHHHHHHHHHHHhcc
Confidence            99999999999999999987543

>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}

Probab=99.82  E-value=1.7e-20  Score=151.50  Aligned_cols=100  Identities=25%  Similarity=0.349  Sum_probs=74.7

Q ss_pred             CCcceEEEEEEe--CCCCCCCcceEEEEEeCCeeEeeeCCCC---CCcceeEEcccccCceEEecCCCCCCCCCCceEEE
Q psy9639         177 RDFGREGWLWKT--GPKNADAYRKRWFTLDYRKLMYHEEPLS---AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTL  251 (321)
Q Consensus       177 ~~~~k~G~L~K~--g~~~~~~WkkRwfvL~~~~L~Yyk~~~~---~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i  251 (321)
                      .+++++|||.|+  |... +.|++|||||+++.|+||+++.+   ..|.|.|+|..+.. ..|.... .....++++|.|
T Consensus         3 ~~v~~~G~L~K~~~~~~~-~~WkrRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~-~~v~~~~-~~~~~~~~~F~i   79 (134)
T 2y7b_A            3 SSVEERGFLTIFEDVSGF-GAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTS-RQIEPAN-REFCARRNTFEL   79 (134)
T ss_dssp             CCCCEEEEEEEEEEETTE-EEEEEEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCS-SSCEECC-TTTCCCTTEEEE
T ss_pred             CCceEEeeEEEEcCCCCC-CCcEEEEEEEECCEEEEECCCCcccccCceEEEEhhhCcc-ccccccc-hhhccCCCEEEE
Confidence            467899999999  6665 79999999999999999996544   78999999976421 1133221 222356799999


Q ss_pred             Ee--CC------------------eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         252 KT--PQ------------------RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       252 ~t--~~------------------r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .+  |.                  |+|+|+|+|++|+++||.||+.+|
T Consensus        80 ~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i  127 (134)
T 2y7b_A           80 ITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVL  127 (134)
T ss_dssp             EEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             EecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHH
Confidence            87  43                  578977777777777777777765

>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.81  E-value=4.7e-20  Score=152.05  Aligned_cols=97  Identities=26%  Similarity=0.464  Sum_probs=80.5

Q ss_pred             CCCcceEEEEEEeCCC-----CCCCcceEEEEEeCC-----eeEeeeCCC-CCCcceeEEcccccCceEEecCCCCCCCC
Q psy9639         176 TRDFGREGWLWKTGPK-----NADAYRKRWFTLDYR-----KLMYHEEPL-SAYPKGEIFLGHCSDGYTVRLGVPPGAKD  244 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~-----~~~~WkkRwfvL~~~-----~L~Yyk~~~-~~~~~g~i~L~~~~~~~~V~~~~~~~~~~  244 (321)
                      ...++++|||.|++..     ..+.|++|||||+++     .|.||+++. +..|+|.|+|..    |.+....   ...
T Consensus        15 ~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~----~~~~~~~---~~~   87 (150)
T 1wg7_A           15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDS----CMGVVQN---NKV   87 (150)
T ss_dssp             SCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTT----CCEECCC---CSS
T ss_pred             CCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCCCCcCcEEeccc----CEEEecC---CCC
Confidence            3578999999999853     236999999999987     999999987 788999999965    3443322   135


Q ss_pred             CCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         245 QGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       245 ~~~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ++++|.|.+++ |+|+|+|+|++++++||.+|+.+|
T Consensus        88 ~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai  123 (150)
T 1wg7_A           88 RRFAFELKMQDKSSYLLAADSEVEMEEWITILNKIL  123 (150)
T ss_dssp             CTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHH
Confidence            67999999995 999999999999999999999987

>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}

Probab=99.81  E-value=9.3e-20  Score=138.26  Aligned_cols=89  Identities=17%  Similarity=0.273  Sum_probs=75.1

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC--CCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEE
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK--KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHI  134 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~--~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~  134 (321)
                      .|+|||+|+|+..++|++|||||.  ++.|.||++ .+  ..|.|.|+|.++..+..+   ..+++|.|.    .+.|+|
T Consensus         2 ~k~G~L~K~g~~~k~WkkR~FvL~--~~~L~Yy~~~~~~~~~~~~~i~l~~~~~~~~~---~~~~~F~i~----~~~r~~   72 (94)
T 2rsg_A            2 ERCGVLSKWTNYIHGWQDRWVVLK--NNALSYYKSEDETEYGCRGSICLSKAVITPHD---FDECRFDIS----VNDSVW   72 (94)
T ss_dssp             CEEEEEEEESSSTTCEEEEEEEEE--TTEEEEESSTTGGGTCCSEEEETTTCEEEECS---SCSSEEEEE----ETTEEE
T ss_pred             CEEEEEEEeCCCCCCceEEEEEEE--CCEEEEEEecccccccceeeEecceeeeecCc---ccceeEEEE----eCCeEE
Confidence            589999999999999999999999  999999988 43  568999999998654332   456676653    356999


Q ss_pred             EEEeCChHHHHHHHHHHHhhh
Q psy9639         135 YVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      +|+|+|++|+.+|+++|++|+
T Consensus        73 ~l~A~s~~e~~~Wi~aLq~Ak   93 (94)
T 2rsg_A           73 YLRAQDPDHRQQWIDAIEQHK   93 (94)
T ss_dssp             EEECCSSCCTHHHHHHHHHHC
T ss_pred             EEECCCHHHHHHHHHHHHhhc
Confidence            999999999999999999774

>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A

Probab=99.81  E-value=1.4e-20  Score=150.32  Aligned_cols=98  Identities=22%  Similarity=0.318  Sum_probs=78.3

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeC-CeeEeeeCCCCCCcceeEEcccccCc-eEEecCCCCCCCCCCceEEEEe-
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDY-RKLMYHEEPLSAYPKGEIFLGHCSDG-YTVRLGVPPGAKDQGFTFTLKT-  253 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~-~~L~Yyk~~~~~~~~g~i~L~~~~~~-~~V~~~~~~~~~~~~~~F~i~t-  253 (321)
                      ..++++|||.|+|... +.|++|||||++ +.|+||+++.+..++|.|+|..+... +.+...    ...++++|.|.+ 
T Consensus         6 ~~~~~~G~L~K~g~~~-k~WkkRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~----~~~~~~~F~I~~~   80 (125)
T 1unq_A            6 VAIVKEGWLHKRGEYI-KTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKT----ERPRPNTFIIRCL   80 (125)
T ss_dssp             GCEEEEEEEEEECSSS-CCEEEEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECTTCEEEEE----CSSSTTEEEEEEE
T ss_pred             CCeeEEeeEEeccCCc-cCccCcEEEEecCCEEEEEeCCCCCCCCceeEccceeEEeeeeccc----ccCCCCEEEEEec
Confidence            4678999999999876 899999999995 69999999988889999999654211 112111    124679999995 


Q ss_pred             ---CCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         254 ---PQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       254 ---~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                         +.|+|+|+|+|++|+++||.||+.++
T Consensus        81 ~~~~~~~~~~~a~s~~e~~~Wi~al~~~~  109 (125)
T 1unq_A           81 QWTTVIERTFHVETPEEREEWTTAIQTVA  109 (125)
T ss_dssp             ETTEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CCCCceeEEEEeCCHHHHHHHHHHHHHHH
Confidence               56999999999999999999998887

>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.81  E-value=4.4e-19  Score=138.98  Aligned_cols=98  Identities=17%  Similarity=0.265  Sum_probs=83.2

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEe-ccCCCCCCceeEEEEeecCceEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVI-APSKIEHPHSLQLTFMKDGSTRH  133 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~-~~~~~~~~~~~~i~~~~~~~~R~  133 (321)
                      ...++|||.|+|+..+.|++|||||.  ++.|.||++ .+..|+|.|+|.++..+. .....+.+++|+|..   ...|+
T Consensus         4 ~~~~~G~L~K~g~~~~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~---~~~r~   78 (113)
T 1pls_A            4 KRIREGYLVKKGSVFNTWKPMWVVLL--EDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITT---TKQQD   78 (113)
T ss_dssp             CCSEEEEEEEESSSSSCCEEEEEEEE--TTEEEEESSTTCSSCSEEEESSSCCEESSCCSSCCSSSEEEEEE---TTTEE
T ss_pred             CCcEEEEEEEeCCCCCCceEEEEEEE--CCEEEEEeCCCCCCcceEEEcCCCEEEEecCCCCCCccEEEEEc---CCCCE
Confidence            35789999999999999999999999  899999999 889999999999997653 233456778888752   23499


Q ss_pred             EEEEeCChHHHHHHHHHHHhhhhhh
Q psy9639         134 IYVYHEESQSIMNWYHAIRNAKFHR  158 (321)
Q Consensus       134 ~~l~a~s~~e~~~W~~aLr~a~~~~  158 (321)
                      |+|+|+|++++.+|+.+|+.+....
T Consensus        79 ~~l~a~s~~e~~~Wi~ai~~~~~~~  103 (113)
T 1pls_A           79 HFFQAAFLEERDAWVRDINKAIKCI  103 (113)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999886653

>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.81  E-value=1.6e-19  Score=140.41  Aligned_cols=96  Identities=14%  Similarity=0.243  Sum_probs=72.3

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC-
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP-  254 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~-  254 (321)
                      ..+++++|||.|+  .. +.|++|||||+++.|+||+++.+ .+.|.+.|..  .+|.|....   ...++++|.|.++ 
T Consensus         5 ~~~~~~~G~L~K~--~~-k~Wk~RwfvL~~~~L~yyk~~~~-~~~~~~~i~l--~~~~v~~~~---~~~~~~~F~i~~~~   75 (107)
T 2cof_A            5 SSGLETSSYLNVL--VN-SQWKSRWCSVRDNHLHFYQDRNR-SKVAQQPLSL--VGCEVVPDP---SPDHLYSFRILHKG   75 (107)
T ss_dssp             CCCCTTCCEEEEE--ET-TEEEEEEEEECSSCEEEECSSTT-CSEEEEEECT--TTCEEECCC---BTTBSCEEEEEETT
T ss_pred             CCCCcEeEEEEEe--cC-CCcceEEEEEECCEEEEEeCCcc-cCCCeeEEec--cceEEEECC---CCCCCeEEEEEeCC
Confidence            3467899999999  33 79999999999999999999876 4555555533  346565432   1346799999998 


Q ss_pred             CeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         255 QRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       255 ~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      +|+|+|+|+|++|+++||.+|+.++.
T Consensus        76 ~r~~~l~A~s~~e~~~Wi~al~~~~~  101 (107)
T 2cof_A           76 EELAKLEAKSSEEMGHWLGLLLSESG  101 (107)
T ss_dssp             EEEEEEECSSHHHHHHHHHHHHHHSS
T ss_pred             CeEEEEEcCCHHHHHHHHHHHHHHHc
Confidence            79999777777777777777776654

>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A

Probab=99.80  E-value=1.8e-19  Score=151.48  Aligned_cols=98  Identities=18%  Similarity=0.290  Sum_probs=69.3

Q ss_pred             CcceEEEEE----------EeCCCCCCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCC
Q psy9639         178 DFGREGWLW----------KTGPKNADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQ  245 (321)
Q Consensus       178 ~~~k~G~L~----------K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~  245 (321)
                      +++++|||.          |+|... +.|++|||||+++.|+||+++.+  ..+.|.|+|...  +|.+....  ....+
T Consensus         2 dv~~eG~L~~k~~~~~~gkK~g~~~-k~WkkRwfvL~~~~L~yyk~~~~~~~~~~g~i~l~~~--~~~~~~~~--~~~~~   76 (168)
T 2j59_M            2 DAAKEGWLHFRPLVTDKGKRVGGSI-RPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVN--ACLIDISY--SETKR   76 (168)
T ss_dssp             -CCEEEEEEEEECC-------------CCEEEEEEEETTEEEEESCTTCC--------CEECS--SCEEEECS--SSCSC
T ss_pred             CCcEEEEEeeeeecccCCcccCCCC-CCceEEEEEEeCCEEEEEECCcccccccCCceEeccc--ceEEEecc--ccCCC
Confidence            578999999          555555 79999999999999999999965  678999988653  23332221  22346


Q ss_pred             CceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         246 GFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       246 ~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      +++|.|.+++|+|+|+|+|++||++||.+|+.++.
T Consensus        77 ~~~F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~  111 (168)
T 2j59_M           77 KNVFRLTTSDCECLFQAEDRDDMLAWIKTIQESSN  111 (168)
T ss_dssp             SSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred             CCEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHh
Confidence            79999999999999999999999999999999883

>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.80  E-value=1.1e-19  Score=144.78  Aligned_cols=99  Identities=15%  Similarity=0.264  Sum_probs=73.4

Q ss_pred             CCCcceEEEEEEeCCC-------CCCCcceEEEEEeCCeeEeeeCCCCCC----cce--eEEcccccCceEEecCCCCCC
Q psy9639         176 TRDFGREGWLWKTGPK-------NADAYRKRWFTLDYRKLMYHEEPLSAY----PKG--EIFLGHCSDGYTVRLGVPPGA  242 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~-------~~~~WkkRwfvL~~~~L~Yyk~~~~~~----~~g--~i~L~~~~~~~~V~~~~~~~~  242 (321)
                      +.+++++|||.|++..       ..+.|++|||||+++.|+||+++.+..    +.|  .|+|.    ++.+....  +.
T Consensus         5 ~~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~----~~~~~~~~--~~   78 (123)
T 1wjm_A            5 SSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLA----RAQGSVAF--DY   78 (123)
T ss_dssp             CCCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECT----TCEEEECT--TC
T ss_pred             CCCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEcc----CcEEeecc--cc
Confidence            4577899999998753       137999999999999999999886532    234  46553    34444322  22


Q ss_pred             CCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         243 KDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       243 ~~~~~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      ..++|+|.|.+++ ++|+|+|+|++||++||.||+.++.
T Consensus        79 ~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~  117 (123)
T 1wjm_A           79 RKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIA  117 (123)
T ss_dssp             SSCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHh
Confidence            3578999999876 9999888888888888888887764

>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A

Probab=99.80  E-value=3e-19  Score=138.05  Aligned_cols=91  Identities=16%  Similarity=0.341  Sum_probs=70.3

Q ss_pred             eEEEEEEeC--------CCCCCCcceEEEEEeCCeeEeeeCCCC----C--CcceeEEcccccCceEEecCCCCCCCCCC
Q psy9639         181 REGWLWKTG--------PKNADAYRKRWFTLDYRKLMYHEEPLS----A--YPKGEIFLGHCSDGYTVRLGVPPGAKDQG  246 (321)
Q Consensus       181 k~G~L~K~g--------~~~~~~WkkRwfvL~~~~L~Yyk~~~~----~--~~~g~i~L~~~~~~~~V~~~~~~~~~~~~  246 (321)
                      ++|||.|++        ... +.|++|||||+++.|+||+++.+    .  .+.+.|+|..    +.+....  ....++
T Consensus         1 ~eG~L~kk~~~~~~gk~~~~-~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~----~~~~~~~--~~~~~~   73 (106)
T 1btn_A            1 MEGFLNRKHEWEAHNKKASS-RSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKE----AICEVAL--DYKKKK   73 (106)
T ss_dssp             CEEEEEEEEEECSTTCBCSC-CCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTT----CEEEECS--SCCSSS
T ss_pred             CccEEEEEEEEeCCCccCCC-CChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCC----CEEEEcc--cccCCc
Confidence            489999998        444 79999999999999999998863    2  3566777743    3343321  223467


Q ss_pred             ceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         247 FTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       247 ~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      ++|+|.+++ |+|+|+|+|++||++||.||+.|
T Consensus        74 ~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai~~A  106 (106)
T 1btn_A           74 HVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA  106 (106)
T ss_dssp             SEEEEECTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred             cEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence            999999875 99999999999999999998865

>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A

Probab=99.80  E-value=2.1e-19  Score=156.77  Aligned_cols=99  Identities=25%  Similarity=0.420  Sum_probs=77.2

Q ss_pred             CCcceEEEEEEeCCC---CCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCC-CCCCCCCceEEEE
Q psy9639         177 RDFGREGWLWKTGPK---NADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP-PGAKDQGFTFTLK  252 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~---~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~-~~~~~~~~~F~i~  252 (321)
                      .+++++|||.|+|+.   ..+.|++|||||+++.|+||+++.+..|+|.|+|..    +.+..... .....++++|.|.
T Consensus       104 ~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~~~~p~g~I~L~~----~~~v~~~~~~~~~~k~~~F~I~  179 (211)
T 1u5e_A          104 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDG----YDVRMNNTLRKDGKKDCCFEIC  179 (211)
T ss_dssp             SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTCSSCSEEEECTT----CEEEECGGGCSSTTGGGEEEEE
T ss_pred             CCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCCCccceEEEEeCC----cEEEEcCCccccCCCCCEEEEE
Confidence            478999999999863   236999999999999999999999999999999965    34433210 1122356999999


Q ss_pred             eCC-eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         253 TPQ-RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       253 t~~-r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +++ |+|+|+|+|++++++||.+|+.+|
T Consensus       180 t~~~r~~~l~A~s~~e~~~Wi~aL~~ai  207 (211)
T 1u5e_A          180 APDKRIYQFTAASPKDAEEWVQQLKFIL  207 (211)
T ss_dssp             CSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence            985 999977777777777777777765

>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.80  E-value=2.8e-19  Score=144.12  Aligned_cols=98  Identities=13%  Similarity=0.140  Sum_probs=78.3

Q ss_pred             cccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecC----
Q psy9639          55 ITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDG----  129 (321)
Q Consensus        55 ~~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~----  129 (321)
                      ....++|||.|+| ..++|++|||||.  +++|.||++ .+..|+|.|+|.++.++-.+ ...++++|.|......    
T Consensus         6 ~~v~k~GwL~K~g-~~k~WkrRWfVLk--~~~L~yyk~~~~~~p~G~I~L~~~~v~~~~-~~~~~~~F~i~~~~~~~i~~   81 (130)
T 1v88_A            6 SGIVMADWLKIRG-TLKSWTKLWCVLK--PGVLLIYKTQKNGQWVGTVLLNACEIIERP-SKKDGFCFKLFHPLEQSIWA   81 (130)
T ss_dssp             SSCCEEEEEEECC-SSSSCEEEEEEEE--TTEEEEESCSSSCCCCEEEECSSCEECCCC-TTTSSCEEEEECTTCCCCSC
T ss_pred             CceEEEeEEEEeC-CCCCceEEEEEEE--CCEEEEECCCCCCCceEEEEcCCCEEEECC-CCCCCeEEEEEcCCcccccc
Confidence            3467999999999 7789999999999  999999999 88999999999998653222 2234578887432110    


Q ss_pred             ----------------ceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         130 ----------------STRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       130 ----------------~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                                      ++|.|+|+|+|++++.+|+.+|+.+..
T Consensus        82 ~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~  124 (130)
T 1v88_A           82 VKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALK  124 (130)
T ss_dssp             SSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred             ccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence                            136689999999999999999997753

>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}

Probab=99.79  E-value=3.7e-19  Score=142.89  Aligned_cols=103  Identities=20%  Similarity=0.307  Sum_probs=65.1

Q ss_pred             CcceEEEEEEeCCC-CCCCcceEEEEEeC-CeeEeeeCCCC---CCcceeEEccccc----------CceEEecCC---C
Q psy9639         178 DFGREGWLWKTGPK-NADAYRKRWFTLDY-RKLMYHEEPLS---AYPKGEIFLGHCS----------DGYTVRLGV---P  239 (321)
Q Consensus       178 ~~~k~G~L~K~g~~-~~~~WkkRwfvL~~-~~L~Yyk~~~~---~~~~g~i~L~~~~----------~~~~V~~~~---~  239 (321)
                      .++++|||.|++++ ..++||+|||||++ +.|+||++..+   ....+.|+|..+.          .++.+.+..   .
T Consensus         3 ~~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~~   82 (128)
T 2rlo_A            3 IPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGSA   82 (128)
T ss_dssp             CEEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCCC
T ss_pred             cceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCccccccccccccccccc
Confidence            46799999999542 34899999999996 78888876321   1122345443210          011111000   0


Q ss_pred             CCCCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         240 PGAKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       240 ~~~~~~~~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      ......+++|.|++++ |+|+|+|+|++|+++||+||+.+|.
T Consensus        83 ~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~  124 (128)
T 2rlo_A           83 GQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQIL  124 (128)
T ss_dssp             SSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred             cccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence            0011467899999987 9999777777777777777777664

>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.79  E-value=6.7e-19  Score=145.00  Aligned_cols=95  Identities=17%  Similarity=0.192  Sum_probs=79.1

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEec-cCCCCCCceeEEEEeecCceEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIA-PSKIEHPHSLQLTFMKDGSTRH  133 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~-~~~~~~~~~~~i~~~~~~~~R~  133 (321)
                      ...++|||.|+|+..++|++|||||.  ++.|.||++ .+..|+|.|+|.++..+.. ......+++|.|.    +..|+
T Consensus        17 pv~keG~L~Kkg~~~k~WkrRWFvLk--~~~L~Yyk~~~d~~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~----t~~r~   90 (149)
T 1x1f_A           17 PLYFEGFLLIKRSGYREYEHYWTELR--GTTLFFYTDKKSIIYVDKLDIVDLTCLTEQNSTEKNCAKFTLV----LPKEE   90 (149)
T ss_dssp             CEEEEEEEEEECTTCCSCEEEEEEEE--TTEEEEESCSSCSSCSEECCCSSCCEEEECCCTTSCCCEEEEE----CSSCC
T ss_pred             CccEEEEEEEeCCCCCCceeEEEEEc--CCEEEEEeCCCccccCcEEECCCceEEeeccCCCCcCcEEEEE----cCCCE
Confidence            47899999999999999999999999  899999999 8999999999999865422 1112235666653    45699


Q ss_pred             EEEEeCChHHHHHHHHHHHhhhh
Q psy9639         134 IYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       134 ~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      |+|+|+|.+++.+|+.+|+.+..
T Consensus        91 ~~f~A~s~ee~~eWi~aI~~v~~  113 (149)
T 1x1f_A           91 VQLKTENTESGEEWRGFILTVTE  113 (149)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCHHHHHHHHHHHHHHHc
Confidence            99999999999999999987644

>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*

Probab=99.79  E-value=1e-18  Score=139.38  Aligned_cols=100  Identities=17%  Similarity=0.390  Sum_probs=83.4

Q ss_pred             ccccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEee-----
Q psy9639          54 YITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMK-----  127 (321)
Q Consensus        54 ~~~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~-----  127 (321)
                      +.+..++|||.|+|+..+.|++|||||.  ++.|.||++ .+..|+|.|+|.++.+...+ ..+.+++|+|....     
T Consensus         2 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~-~~~~~~~f~i~~~~~~~~~   78 (127)
T 1fgy_A            2 FFNPDREGWLLKLGGRVKTWKRRWFILT--DNCLYYFEYTTDKEPRGIIPLENLSIREVL-DPRKPNCFELYNPSHKGQV   78 (127)
T ss_dssp             CSSCSEEEEEEEECSSSCCEEEEEEEEE--TTEEEEESSTTCSSCSEEEECTTCEEEEEC-CSSCSSEEEEECSSSTTCC
T ss_pred             CCCCceEeEEEEECCCCCCeEEEEEEEE--CCEEEEeCCCCCCCcceEEECCceEEEEcc-CCCCCceEEEecCCccccc
Confidence            4567899999999999999999999999  999999999 88999999999998654332 34678898885321     


Q ss_pred             -------------cCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         128 -------------DGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       128 -------------~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                                   .+..|+|+|+|+|++++.+|+.+|+.+..
T Consensus        79 ~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~  120 (127)
T 1fgy_A           79 IKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS  120 (127)
T ss_dssp             CCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             cccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence                         12358999999999999999999987754

>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A

Probab=99.79  E-value=1e-18  Score=138.80  Aligned_cols=99  Identities=19%  Similarity=0.324  Sum_probs=78.0

Q ss_pred             cccccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-C---CCCceeEEeccceEEEeccCCCC--------CCce
Q psy9639          53 TYITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-E---KKEPKATLRISELNVVIAPSKIE--------HPHS  120 (321)
Q Consensus        53 ~~~~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~---~~~pkg~I~l~~~~~~~~~~~~~--------~~~~  120 (321)
                      |.. ..++|||.|+|+..++|++|||||.  ++.|.||++ +   +..|.|+|.|.++.++..+...+        .++.
T Consensus         3 p~~-~~k~G~L~Kk~~~~k~W~~rwfVL~--~~~L~yyK~~~~~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~   79 (120)
T 4a6h_A            3 PFT-EIKSGFLERRSKFLKSYSKGYYVLT--PNFLHEFKTADRKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAK   79 (120)
T ss_dssp             CCC-CSEEEEEEEEETTTTEEEEEEEEEC--SSEEEEESSCCTTTCCSCSEEEEGGGEEEEEECCCCC---------CCE
T ss_pred             CCc-ccEEEEEEEcCCCCCCCccEEEEEe--CCEEEEEcCCCcCcCCCceEEEECCCCEEEEcccccccccccccCCCcE
Confidence            555 8899999999999999999999999  789999998 4   67799999999987654332211        4556


Q ss_pred             eEEEEeecC---ceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         121 LQLTFMKDG---STRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       121 ~~i~~~~~~---~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      |.|.....+   ..++|+|.|+|.+|+.+|+++|+.+
T Consensus        80 F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~  116 (120)
T 4a6h_A           80 FVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKIL  116 (120)
T ss_dssp             EEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHH
Confidence            665432211   2479999999999999999999865

>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*

Probab=99.79  E-value=1.1e-18  Score=163.34  Aligned_cols=126  Identities=27%  Similarity=0.531  Sum_probs=91.1

Q ss_pred             ChHHHHHHHHHHHhhhhhhccccCCCCChhhhhhhhCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCc
Q psy9639         140 ESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYP  219 (321)
Q Consensus       140 s~~e~~~W~~aLr~a~~~~l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~  219 (321)
                      ..+.+..+++.|+...+.     .|...+.++.. ...+++++|||.|+|+.. +.|++|||||+++.|+||+++.+..|
T Consensus       180 p~e~L~~iY~~I~~~ei~-----~~~e~~~~l~~-~f~~~~k~G~L~K~g~~~-k~WkkRwFVL~~~~L~Yyk~~~~~~p  252 (347)
T 2r09_A          180 PEELLRNLYESIKNEPFK-----IPEDDGNDLTY-TFFNPDREGWLLKLGGRV-KTWKRRWFILTDNCLYYFEYTTDKEP  252 (347)
T ss_dssp             CHHHHHHHHHHHHHSCCC-----CTTCCSCCGGG-CCCCCCEEEEEEEECSSS-CCEEEEEEEEETTEEEEESSTTCSSC
T ss_pred             CHHHHHHHHHhhccCccc-----ccccccccccc-cccccccCCeeEecCCCc-ccceeEEEEEcCCEEEEEcCCCccCC
Confidence            346677788888755332     23333333222 234578999999999886 89999999999999999999999999


Q ss_pred             ceeEEcccccCceEEecCCCCCCCCCCceEEEEeC----------------------CeEEEEEcCCHHHHHHHHHHHhh
Q psy9639         220 KGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP----------------------QRWYQFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       220 ~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~----------------------~r~~~f~A~s~~e~~~Wv~aL~~  277 (321)
                      +|.|+|..    +.|....   ...+++||+|.++                      .|+|+|+|+|++|+++||.+|+.
T Consensus       253 ~G~I~L~~----~~v~~~~---~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~  325 (347)
T 2r09_A          253 RGIIPLEN----LSIREVE---DPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKA  325 (347)
T ss_dssp             SEEEECTT----CEEEEEC---CSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHH
T ss_pred             cEEEEcCC----eEEEEcc---CCCCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHH
Confidence            99999954    5555432   1256899999976                      36777666666666666666666


Q ss_pred             cc
Q psy9639         278 GF  279 (321)
Q Consensus       278 ai  279 (321)
                      ++
T Consensus       326 ai  327 (347)
T 2r09_A          326 SI  327 (347)
T ss_dssp             HH
T ss_pred             HH
Confidence            55

>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A

Probab=99.79  E-value=8.8e-19  Score=134.96  Aligned_cols=90  Identities=22%  Similarity=0.457  Sum_probs=75.5

Q ss_pred             eeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC--CCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639          59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK--KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY  135 (321)
Q Consensus        59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~--~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~  135 (321)
                      ++|||+|+|+..++|++|||||.  ++.|.||++ .+  ..|+|.|+|.++.+...+   ..+++|.|..   .+.|+|+
T Consensus         1 ~eG~L~K~g~~~k~Wk~R~fvL~--~~~L~Yy~~~~~~~~~~~g~i~L~~~~v~~~~---~~~~~F~i~~---~~~r~~~   72 (103)
T 3rcp_A            1 MEGVLYKWTNYLTGWQPRWFVLD--NGILSYYDSQDDVCKGSKGSIKMAVCEIKVHS---ADNTRMELII---PGEQHFY   72 (103)
T ss_dssp             CEEEEEEECCTTTCEEEEEEEEE--TTEEEEESSCC---CCCSCEEEGGGCEEECCT---TCSSEEEEEE---TTTEEEE
T ss_pred             CceEEEEccCCCCCeeceEEEEE--CCEEEEEecCCcccCCcccEEEeeeeEEEEcC---CCCceEEEEe---CCCCEEE
Confidence            58999999999999999999999  999999999 54  469999999987654433   3477887742   3369999


Q ss_pred             EEeCChHHHHHHHHHHHhhhh
Q psy9639         136 VYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       136 l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      |+|+|++++.+|+.+|+.+..
T Consensus        73 l~a~s~~e~~~Wi~al~~a~~   93 (103)
T 3rcp_A           73 MKAVNAAERQRWLVALGSSKA   93 (103)
T ss_dssp             EECSSHHHHHHHHHHHHTTSC
T ss_pred             EECCCHHHHHHHHHHHHHHHH
Confidence            999999999999999998754

>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.79  E-value=1e-18  Score=138.52  Aligned_cols=96  Identities=14%  Similarity=0.266  Sum_probs=80.1

Q ss_pred             ccceeeEEEeecC--CCCCceeeEEEEeccCC--eEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCc
Q psy9639          56 TGHMDGFLMKRGK--ESGKYHPRRFVLNEIND--TIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGS  130 (321)
Q Consensus        56 ~~~~~G~L~K~g~--~~~~wk~R~fvL~~~~~--~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~  130 (321)
                      ...++|||+|+|+  ..+.|++|||||.  ++  .|.||++ .+..|+|.|+|.++..+...  ...+++|.|.    ++
T Consensus         7 ~~~~~G~L~K~g~~~~~k~WkkRwfvL~--~~~~~L~Yy~~~~~~~~~g~I~L~~~~~~~~~--~~~~~~F~i~----~~   78 (119)
T 2dhk_A            7 GKKLCGYLSKFGGKGPIRGWKSRWFFYD--ERKCQLYYSRTAQDANPLDSIDLSSAVFDCKA--DAEEGIFEIK----TP   78 (119)
T ss_dssp             CCCCEEEEEECSCSSSSCCCEEEEEEEE--TTTTEEEEESSTTCCSCSEEEEGGGCEEEECT--TGGGCEEEEE----CS
T ss_pred             CCcEEEEEEecCCCCCCCCceeEEEEEE--CCccEEEEECCCCCcccccEEECCCCEEEecC--CCCCCEEEEE----eC
Confidence            4678999999997  6789999999999  66  9999999 88899999999999765432  2345666653    45


Q ss_pred             eEEEEEEeCChHHHHHHHHHHHhhhhhhc
Q psy9639         131 TRHIYVYHEESQSIMNWYHAIRNAKFHRL  159 (321)
Q Consensus       131 ~R~~~l~a~s~~e~~~W~~aLr~a~~~~l  159 (321)
                      .|+|+|+|+|++++.+|+.+|+.+...+.
T Consensus        79 ~r~~~l~a~s~~e~~~Wi~al~~~~~~~~  107 (119)
T 2dhk_A           79 SRVITLKAATKQAMLYWLQQLQMKRWEFH  107 (119)
T ss_dssp             SCCEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCHHHHHHHHHHHHHHHHHhc
Confidence            79999999999999999999998876544

>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.78  E-value=2.7e-18  Score=134.61  Aligned_cols=96  Identities=22%  Similarity=0.371  Sum_probs=81.5

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEE-eccCCCCCCceeEEEEeecCceEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVV-IAPSKIEHPHSLQLTFMKDGSTRH  133 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~-~~~~~~~~~~~~~i~~~~~~~~R~  133 (321)
                      ...++|||.|+|+..+.|++|||||.  ++.|.||++ ++..|+|.|+|.++..+ ..+...+++++|.|.    ++.|+
T Consensus         7 ~~~~~G~L~K~~~~~~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~----~~~r~   80 (115)
T 2dn6_A            7 GVLKQGYMMKKGHRRKNWTERWFVLK--PNIISYYVSEDLKDKKGDILLDENCCVESLPDKDGKKCLFLVK----CFDKT   80 (115)
T ss_dssp             SCSEEEEEEEECTTSSCEEEEEEEEC--SSCEEEESSTTCSSEEEEECCCTTCEEEEECCCTTCCSEEEEE----CSSCE
T ss_pred             CceEEEEEEecCCCCCCcEEeEEEEE--CCEEEEeCCCCCcccCcEEEecCcEEEEECCCCCCCeeEEEEE----eCCCE
Confidence            46799999999998999999999999  899999999 88999999999986433 344445677888774    45699


Q ss_pred             EEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         134 IYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       134 ~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      |+|+|+|++++.+|+.+|+.+...
T Consensus        81 ~~l~a~s~~e~~~Wi~ai~~~~~~  104 (115)
T 2dn6_A           81 FEISASDKKKKQEWIQAIHSTIHL  104 (115)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999987543

>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A

Probab=99.78  E-value=1.8e-18  Score=138.10  Aligned_cols=96  Identities=22%  Similarity=0.358  Sum_probs=83.1

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHI  134 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~  134 (321)
                      ...++|||.|+|+..+.|++|||||.  ++.|.||++ .+..|+|.|+|.++..+......+.+++|.|.    ++.|+|
T Consensus        17 ~~~~~G~L~K~g~~~~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~----~~~r~~   90 (126)
T 1fao_A           17 LGTKEGYLTKQGGLVKTWKTRWFTLH--RNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLV----FPFRTF   90 (126)
T ss_dssp             TTCEEEEEEEECSSSCCEEEEEEEEE--TTEEEEESSTTCSSCSEEEEGGGCCEEEEECSSSSSSEEEEE----ETTEEE
T ss_pred             CccEEEEEEEcCCCCCCcccEEEEEE--CCEEEEeCCCCCCCceeEEEccceEEEEecccCCCCCEEEEE----eCCcEE
Confidence            46899999999998999999999999  999999999 88999999999999755444445678888875    246999


Q ss_pred             EEEeCChHHHHHHHHHHHhhhhh
Q psy9639         135 YVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      +|+|+|++++.+|+.+|+.+...
T Consensus        91 ~l~a~s~~e~~~Wi~al~~~i~~  113 (126)
T 1fao_A           91 YLCAKTGVEADEWIKILRWKLSQ  113 (126)
T ss_dssp             EEECSSHHHHHHHHHHHHHHHHT
T ss_pred             EEECCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999977543

>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A

Probab=99.77  E-value=1.3e-18  Score=136.16  Aligned_cols=95  Identities=14%  Similarity=0.312  Sum_probs=76.6

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEE-eccCCeEEeecC-CCCCceeEEeccceEEEec---------cCCC-CCCceeEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVL-NEINDTIKYYVK-EKKEPKATLRISELNVVIA---------PSKI-EHPHSLQL  123 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL-~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~---------~~~~-~~~~~~~i  123 (321)
                      +..++|||.|+|+..+.|++||||| .  ++.|.||++ .+..|+|.|+|......+.         +... ..+++|+|
T Consensus         4 ~~~~~G~L~K~g~~~k~WkkR~fvL~~--~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i   81 (112)
T 3aj4_A            4 AFVKSGWLLRQSTILKRWKKNWFDLWS--DGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQI   81 (112)
T ss_dssp             SCSEEEEEEEECSSSCCEEEEEEEECT--TSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEE
T ss_pred             ceeEEEEEEeeCCCCCCeeceEEEEee--CCEEEEEcCCCCCCCCccccccccceeecccccccccCCCCCCCcCcEEEE
Confidence            4578999999999899999999999 6  899999999 8899999999987532211         2111 22568877


Q ss_pred             EEeecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         124 TFMKDGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       124 ~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      ..   ...|+|+|+|+|++|+.+|+.+|+.++
T Consensus        82 ~~---~~~r~~~l~a~s~~e~~~Wi~al~~a~  110 (112)
T 3aj4_A           82 VC---RDGKTISLCAESTDDCLAWKFTLQDSR  110 (112)
T ss_dssp             EE---TTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             Ee---cCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence            42   346999999999999999999999875

>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A

Probab=99.77  E-value=1.6e-18  Score=135.69  Aligned_cols=96  Identities=19%  Similarity=0.234  Sum_probs=77.5

Q ss_pred             ccceeeEEEee-cCCCC-CceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEe-ccCCCCCCceeEEEEeecC--
Q psy9639          56 TGHMDGFLMKR-GKESG-KYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVI-APSKIEHPHSLQLTFMKDG--  129 (321)
Q Consensus        56 ~~~~~G~L~K~-g~~~~-~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~-~~~~~~~~~~~~i~~~~~~--  129 (321)
                      .++++|||.|+ ++..+ +||+|||||+  +++|.||++ ++++|+|+|+|.++.+.- .+...+.+|+|.|.. .++  
T Consensus        11 ~VirkGWL~k~~~g~~k~~wk~rWFVLt--~~~L~yyKd~~eke~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~-~d~r~   87 (125)
T 1dyn_A           11 LVIRKGWLTINNIGIMKGGSKEYWFVLT--AENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFN-TEQRN   87 (125)
T ss_dssp             CEEEEEEEEESCCCGGGTSSEEEEEEEE--SSEEEEESSTTCSCEEEEEECTTEEEEECCSCSSSSCEEEEEEE-TTSSC
T ss_pred             ceEEEEEEEEecCccccCCceeeEEEEe--ccceeeecCCcccccceEEECCCceEeccCCCCCCCceEEEEEC-CCCcc
Confidence            47899999994 55565 5999999999  999999999 999999999999986432 233346778888843 332  


Q ss_pred             ---ceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         130 ---STRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       130 ---~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                         ..++|.|.|+|.+|+.+|+.+|+.|
T Consensus        88 v~~~h~~y~LsA~t~ee~~~Wi~s~~ra  115 (125)
T 1dyn_A           88 VYKDYRQLELACETQEEVDSWKASFLRA  115 (125)
T ss_dssp             SSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred             ccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence               3578999999999999999999433

>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B

Probab=99.77  E-value=3.1e-18  Score=134.43  Aligned_cols=94  Identities=14%  Similarity=0.249  Sum_probs=77.1

Q ss_pred             ceeeEEEeecC----CCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEE--eccCCCCCCceeEEEEeecCc
Q psy9639          58 HMDGFLMKRGK----ESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVV--IAPSKIEHPHSLQLTFMKDGS  130 (321)
Q Consensus        58 ~~~G~L~K~g~----~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~--~~~~~~~~~~~~~i~~~~~~~  130 (321)
                      .++|||.|+++    ..+.|++|||||.  ++.|.||++ ++..|.+.|+|.+..+.  .......++|+|+|..   ..
T Consensus         1 tkeG~L~kK~g~~~~~~k~Wk~rwfvL~--~~~L~~yk~~~~~~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~---~~   75 (112)
T 3cxb_B            1 TKEGMLHYKAGTSYLGKEHWKTCFVVLS--NGILYQYPDRTDVIPLLSVNMGGEQCGGCRRANTTDRPHAFQVIL---SD   75 (112)
T ss_dssp             CEEEEEEECCSCCCSSCCCCEEEEEEEE--TTEEEEESSSSCCSCSEEEETTC-CEEEEEECCCSSCTTEEEEEE---TT
T ss_pred             CceEEEEEeCCCCCCCCCCceEEEEEEE--CCEEEEECCCCCCCccceEEecCCEEEeeeccCCCCCCeEEEEEc---CC
Confidence            37999997754    4689999999999  999999999 88999999999976443  3444567889999853   23


Q ss_pred             eEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         131 TRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       131 ~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      .++|+|+|+|++++.+|+++|+.+..
T Consensus        76 ~~~y~f~A~s~ee~~~Wi~ai~~~~~  101 (112)
T 3cxb_B           76 RPCLELSAESEAEMAEWMQHLCQAVS  101 (112)
T ss_dssp             SCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEEcCCHHHHHHHHHHHHHHhh
Confidence            47899999999999999999987644

>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1

Probab=99.77  E-value=3.5e-18  Score=134.38  Aligned_cols=96  Identities=19%  Similarity=0.375  Sum_probs=79.2

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEecc-------CCCCCCceeEEEEee
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAP-------SKIEHPHSLQLTFMK  127 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~-------~~~~~~~~~~i~~~~  127 (321)
                      ...++|||+|+|+..+.|++|||||...++.|.||++ .+..|+|.|+|.++..+...       ......++|.|.   
T Consensus         7 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~---   83 (117)
T 1v5u_A            7 GRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVK---   83 (117)
T ss_dssp             SSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEE---
T ss_pred             CccEEEEEEecCCCCCCceeeEEEEECCCCEEEEeecCCCCccceEEEccCcEEEeecCccccccccCCCCeEEEEE---
Confidence            4579999999999899999999999843679999999 88999999999998765421       123345777773   


Q ss_pred             cCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         128 DGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       128 ~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                       +..|+|+|+|+|++++.+|+.+|+.+.
T Consensus        84 -~~~r~~~l~a~s~~e~~~Wi~al~~~i  110 (117)
T 1v5u_A           84 -TTRRVYNFCAQDVPSAQQWVDRIQSCL  110 (117)
T ss_dssp             -ESSCEEEEECSSHHHHHHHHHHHHTTC
T ss_pred             -CCCceEEEECCCHHHHHHHHHHHHHHh
Confidence             356999999999999999999998763

>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A

Probab=99.77  E-value=1.5e-18  Score=138.47  Aligned_cols=101  Identities=17%  Similarity=0.277  Sum_probs=82.8

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEE---eccCCCCCCceeEEEEeecCce
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVV---IAPSKIEHPHSLQLTFMKDGST  131 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~---~~~~~~~~~~~~~i~~~~~~~~  131 (321)
                      ...++|||.|+|+..+.|++|||||.. ++.|.||++ .+..|+|.|+|..+..+   +.+...+.+++|+|.....+..
T Consensus         7 ~~~~~G~L~K~g~~~k~WkkRwfvL~~-~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~~~~   85 (125)
T 1unq_A            7 AIVKEGWLHKRGEYIKTWRPRYFLLKN-DGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTV   85 (125)
T ss_dssp             CEEEEEEEEEECSSSCCEEEEEEEEET-TSEEEEESSCCCSHHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEETTEE
T ss_pred             CeeEEeeEEeccCCccCccCcEEEEec-CCEEEEEeCCCCCCCCceeEccceeEEeeeecccccCCCCEEEEEecCCCCc
Confidence            457999999999999999999999982 369999999 88889999999887532   1122346788999865444677


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      |+|+|+|+|.+++.+|+.+|+.+...
T Consensus        86 ~~~~~~a~s~~e~~~Wi~al~~~~~~  111 (125)
T 1unq_A           86 IERTFHVETPEEREEWTTAIQTVADG  111 (125)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             eeEEEEeCCHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999987654

>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A

Probab=99.77  E-value=1e-18  Score=157.15  Aligned_cols=102  Identities=21%  Similarity=0.366  Sum_probs=78.5

Q ss_pred             hhhCCCcceEEEEE--------EeCCC---CCCCcceEEEEEeCCeeEeeeCC------CCCCcceeEEcccccCceEEe
Q psy9639         173 KLLTRDFGREGWLW--------KTGPK---NADAYRKRWFTLDYRKLMYHEEP------LSAYPKGEIFLGHCSDGYTVR  235 (321)
Q Consensus       173 ~~~~~~~~k~G~L~--------K~g~~---~~~~WkkRwfvL~~~~L~Yyk~~------~~~~~~g~i~L~~~~~~~~V~  235 (321)
                      +.....++++|||.        |.|..   ..+.|++|||||+++.|+||+++      .+..|.|.|+|.    ++.|.
T Consensus         5 ~~~~~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~----~~~v~   80 (263)
T 3a8p_A            5 SKEQGVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAE----DSIVQ   80 (263)
T ss_dssp             -----CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECT----TCEEE
T ss_pred             cccCCCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcC----CcEEE
Confidence            33456789999999        44544   03799999999999999999984      566899999994    45565


Q ss_pred             cCCCCCCCCCCceEEEEe-CCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         236 LGVPPGAKDQGFTFTLKT-PQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       236 ~~~~~~~~~~~~~F~i~t-~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      ... .. ..++|+|.|.+ ++++|+|+|+|++||++||.+|+.++.
T Consensus        81 ~~~-~~-~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~  124 (263)
T 3a8p_A           81 SVP-EH-PKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACA  124 (263)
T ss_dssp             ECT-TC-SSCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             ECC-cC-CCCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHH
Confidence            422 22 24689999999 589999999999999999999999884

>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A

Probab=99.77  E-value=1.3e-18  Score=139.11  Aligned_cols=100  Identities=15%  Similarity=0.248  Sum_probs=78.5

Q ss_pred             ccccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC---------CCceeEEeccceEEEeccC-CCCCCceeE
Q psy9639          54 YITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK---------KEPKATLRISELNVVIAPS-KIEHPHSLQ  122 (321)
Q Consensus        54 ~~~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~---------~~pkg~I~l~~~~~~~~~~-~~~~~~~~~  122 (321)
                      +....++|||.|+|...++|++|||||.  ++.|.||++ .+         ..++|+|+|.++.+...++ ..+.+++|+
T Consensus         9 ~~~~~k~G~L~K~g~~~k~Wk~RwfVL~--~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~~~~~k~~~F~   86 (124)
T 2w2x_D            9 KDEHKQQGELYMWDSIDQKWTRHFCAIA--DAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGKNQKSFVFI   86 (124)
T ss_dssp             ----CCEEEEEEEETTTTEEEEEEEEEE--TTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTCBTTBSEEEE
T ss_pred             hhhcceeEEEEEECCCCCCceEeEEEEE--CCEEEEEcccccccccccccCCccccEEECCCCEEEEccCCcCCCCEEEE
Confidence            3467899999999999999999999999  999999997 32         3459999999997655443 245778888


Q ss_pred             EEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         123 LTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       123 i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      |... ..+.++|+|.|+|.+++.+|+++|+.+..
T Consensus        87 I~~~-~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~  119 (124)
T 2w2x_D           87 LEPK-QQGDPPVEFATDKVEELFEWFQSIREITW  119 (124)
T ss_dssp             EEEC-C--CCCEEEEECCCHHHHHHHHHHHHHHC
T ss_pred             EECC-CCCCceEEEEECCHHHHHHHHHHHHHHHH
Confidence            8643 22357899999999999999999998754

>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.77  E-value=4.6e-18  Score=133.70  Aligned_cols=99  Identities=13%  Similarity=0.206  Sum_probs=82.0

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEecc-C-CCCCCceeEEEEeec----
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAP-S-KIEHPHSLQLTFMKD----  128 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~-~-~~~~~~~~~i~~~~~----  128 (321)
                      ...++|||.|+|+..+.|++|||||.  ++.|.||++ .+..|+|.|+|.++.++..+ . ..+.+++|+|.....    
T Consensus         7 ~~~~~G~L~K~g~~~~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~   84 (118)
T 1v89_A            7 GPIKMGWLKKQRSIVKNWQQRYFVLR--AQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNR   84 (118)
T ss_dssp             CEEEEEEEEEECSSSSCEEEEEEEEE--TTEEEEESSSSCCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCC
T ss_pred             CCcEEEEEEecCCCCCCccEEEEEEE--CCEEEEEeCCCCCCceEEEECCCCEEEEcCcCcccCCcceEEEECCcccccc
Confidence            45789999999999999999999999  899999999 88999999999998664322 1 334677888754210    


Q ss_pred             CceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         129 GSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       129 ~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      +..|+|+|+|+|++++.+|+.+|+.+..
T Consensus        85 ~~~~~~~l~a~s~~e~~~Wi~al~~~~~  112 (118)
T 1v89_A           85 MGQDSYVLMASSQAEMEEWVKFLRRVAG  112 (118)
T ss_dssp             SSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence            2569999999999999999999998754

>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.77  E-value=2.4e-18  Score=138.58  Aligned_cols=97  Identities=14%  Similarity=0.278  Sum_probs=77.2

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEE-eccCCeEEeecC-CCCCceeEEeccc-e-EEE-------e-ccCCCCCCceeEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVL-NEINDTIKYYVK-EKKEPKATLRISE-L-NVV-------I-APSKIEHPHSLQL  123 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL-~~~~~~L~Yy~~-~~~~pkg~I~l~~-~-~~~-------~-~~~~~~~~~~~~i  123 (321)
                      ...++|||+|+|+..++|++||||| .  ++.|.||++ .+..++|.|.|.. + ++.       + .+...+.+++|+|
T Consensus         7 ~v~~~G~L~K~g~~~k~WkkRwFVL~~--~~~L~Yyk~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~F~I   84 (130)
T 2d9v_A            7 GLVRGGWLWRQSSILRRWKRNWFALWL--DGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTV   84 (130)
T ss_dssp             CEEEEEEEEEECSSSCCEEEEEEEEET--TTEEEEESSSSTTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTEEEE
T ss_pred             ceeEEEEEEeecCccCCceeeEEEEcc--CCEEEEEeCCCCCCcCceEecccceeEEeccccccccCCCCCCCcCcEEEE
Confidence            3479999999999999999999999 6  899999999 7888999998763 2 111       1 1223456688887


Q ss_pred             EEeecCceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         124 TFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       124 ~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      ..   ...|+|+|+|+|++|+.+|+++|+.+...
T Consensus        85 ~~---~~~r~~~l~A~s~~e~~~Wi~al~~a~~~  115 (130)
T 2d9v_A           85 NL---REGSRLHLCAETRDDAIAWKTALMEANST  115 (130)
T ss_dssp             EE---TTSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred             Ee---CCCCEEEEEcCCHHHHHHHHHHHHHHHcC
Confidence            53   23489999999999999999999988653

>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.77  E-value=7.5e-18  Score=132.46  Aligned_cols=101  Identities=20%  Similarity=0.318  Sum_probs=79.4

Q ss_pred             ccceeeEEEeecCCC-CCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEE
Q psy9639          56 TGHMDGFLMKRGKES-GKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHI  134 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~-~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~  134 (321)
                      ...++|||+|+|+.. +.|++|||||.  ++.|.||++.+..|.+.|.+..+.+...   .+.+++|+|.    ++.|+|
T Consensus         9 ~~~~~G~L~K~~~~~~k~WkkR~fvL~--~~~L~yyk~~~~~~~~~i~l~~~~v~~~---~~~~~~F~I~----~~~r~~   79 (114)
T 2da0_A            9 GSEKKGYLLKKSDGIRKVWQRRKCSVK--NGILTISHATSNRQPAKLNLLTCQVKPN---AEDKKSFDLI----SHNRTY   79 (114)
T ss_dssp             CSCEEEEEEEECSSSCCCEEEEEEEEE--TTEEEECCSSCCSCCEEEETTTSEEEEC---SSSSSCEEEE----ETTEEE
T ss_pred             CccEEEEEEEeCCCCCCCceeEEEEEe--CCEEEEEcCCCCCCCCEEEeeeeEEEEC---CCCCCEEEEE----cCCcEE
Confidence            467999999999866 89999999998  9999999993335556666666544322   2456788775    356999


Q ss_pred             EEEeCChHHHHHHHHHHHhhhhhhccccCCC
Q psy9639         135 YVYHEESQSIMNWYHAIRNAKFHRLQVAFPS  165 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a~~~~l~~~~p~  165 (321)
                      +|+|+|++|+.+|+.+|+.+....+..++++
T Consensus        80 ~l~a~s~~e~~~Wi~al~~~~~~~~~~~~~~  110 (114)
T 2da0_A           80 HFQAEDEQDYVAWISVLTNSKEEALTMAFSG  110 (114)
T ss_dssp             EEECSSHHHHHHHHHHHHHHHHHHHTTSCSS
T ss_pred             EEEcCCHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            9999999999999999999887766655543

>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A

Probab=99.76  E-value=6e-18  Score=131.34  Aligned_cols=94  Identities=21%  Similarity=0.404  Sum_probs=76.3

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCC--eEEeecC-CCCCceeEEeccceEEEeccC-----CCCCCceeEEEEee
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEIND--TIKYYVK-EKKEPKATLRISELNVVIAPS-----KIEHPHSLQLTFMK  127 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~--~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~-----~~~~~~~~~i~~~~  127 (321)
                      ...++|||.|+|+..++|++|||||.  ++  .|.||++ .+..|+|.|+|.++.+.....     +.+.+++|.|..  
T Consensus         6 ~~~~~G~L~K~g~~~~~Wk~R~fvL~--~~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~--   81 (109)
T 2i5f_A            6 VIIKQGCLLKQGHRRKNWKVRKFILR--EDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIIT--   81 (109)
T ss_dssp             CEEEEEEEEEECTTTCCEEEEEEEEE--TTTTEEEEECTTSCSSCSEEEECTTCEEEEECC--------CCSEEEEEC--
T ss_pred             ceeEEEEEEEcCCCCCCceEEEEEEe--CCCcEEEEECCCCCCCccEEEECCCCEEEEccCCcccccCCCceEEEEEe--
Confidence            45789999999999999999999999  54  9999999 889999999999975432211     224678887742  


Q ss_pred             cCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         128 DGSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       128 ~~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                       ...|+|+|+|+|++++.+|+.+|+.+
T Consensus        82 -~~~~~~~l~a~s~~e~~~Wi~ai~~~  107 (109)
T 2i5f_A           82 -ADEVHYFLQAATPKERTEWIKAIQMA  107 (109)
T ss_dssp             -TTCCEEEEECSSHHHHHHHHHHHHHH
T ss_pred             -CCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence             23478999999999999999999875

>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1

Probab=99.76  E-value=5.7e-19  Score=140.61  Aligned_cols=99  Identities=9%  Similarity=0.201  Sum_probs=71.0

Q ss_pred             hCCCcceEEEEEEeCCC-------CCCCcceEEEEEeCCeeEeeeCCCCCCc--------ceeEEcccccCceEEecCCC
Q psy9639         175 LTRDFGREGWLWKTGPK-------NADAYRKRWFTLDYRKLMYHEEPLSAYP--------KGEIFLGHCSDGYTVRLGVP  239 (321)
Q Consensus       175 ~~~~~~k~G~L~K~g~~-------~~~~WkkRwfvL~~~~L~Yyk~~~~~~~--------~g~i~L~~~~~~~~V~~~~~  239 (321)
                      ++.++.++|||.|++..       ..+.|++|||||+++.|+||+++.+..+        .+.|+|..    +.|...  
T Consensus         4 ~~~~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~----~~v~~~--   77 (122)
T 1dro_A            4 TGAGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQN----AAIEIA--   77 (122)
T ss_dssp             CCSSSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSS----CCCEEC--
T ss_pred             CCCceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCC----CEEEeC--
Confidence            34578899999987531       2479999999999999999999876543        25677743    333332  


Q ss_pred             CCCCCCCceEEEEe-CCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         240 PGAKDQGFTFTLKT-PQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       240 ~~~~~~~~~F~i~t-~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .+...++|+|.|.+ ++++|+|+|+|++||++||.+|+.+|
T Consensus        78 ~d~~kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i  118 (122)
T 1dro_A           78 SDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQS  118 (122)
T ss_dssp             CSSSSSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence            12235689999996 57999977766666666666666655

>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}

Probab=99.76  E-value=5.8e-18  Score=135.36  Aligned_cols=99  Identities=16%  Similarity=0.321  Sum_probs=81.6

Q ss_pred             cccccceeeEEEeecC-CCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC--CCCCCceeEEEEeec
Q psy9639          53 TYITGHMDGFLMKRGK-ESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS--KIEHPHSLQLTFMKD  128 (321)
Q Consensus        53 ~~~~~~~~G~L~K~g~-~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~--~~~~~~~~~i~~~~~  128 (321)
                      |-....++|||+|+|+ ..+.|++|||||.  ++.|.||++ .+..|+|.|+|.++.+...+.  ..+.+++|+|.   .
T Consensus        17 ~~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~---~   91 (128)
T 2dkp_A           17 PNAPVVRRGWLYKQDSTGMKLWKKRWFVLS--DLCLFYYRDEKEEGILGSILLPSFQIALLTSEDHINRKYAFKAA---H   91 (128)
T ss_dssp             TTSCCCEEEEEEEECCSSSCCEEEEEEEEE--TTEEEEESSTTCCSEEEEECGGGSEEEECCGGGCCSSCSEEEEE---C
T ss_pred             CCCCcEEEEEEEEeCCCCCCCceeEEEEEe--CCEEEEECCCCCcccceEEEcCceEEEEcCCcccCCCCeEEEEE---c
Confidence            3335679999999998 6789999999998  999999999 899999999999886554322  23567788774   2


Q ss_pred             CceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         129 GSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       129 ~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      ...|+|+|+|+|++++.+|+.+|+.+..
T Consensus        92 ~~~r~~~l~a~s~~e~~~Wi~al~~a~~  119 (128)
T 2dkp_A           92 PNMRTYYFCTDTGKEMELWMKAMLDAAL  119 (128)
T ss_dssp             SSSCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence            2348999999999999999999988754

>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.76  E-value=4.4e-18  Score=133.73  Aligned_cols=92  Identities=16%  Similarity=0.250  Sum_probs=78.6

Q ss_pred             ccceeeEEEeecC-CCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEE
Q psy9639          56 TGHMDGFLMKRGK-ESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRH  133 (321)
Q Consensus        56 ~~~~~G~L~K~g~-~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~  133 (321)
                      ...++|||.|+|+ ..+.|++|||||.  ++.|.||++ ++..|+|.|+|..+..+...    .+++|.|.    ++.|+
T Consensus         7 ~~~~~G~L~K~~~~~~~~WkkR~fvL~--~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~----~~~~F~i~----~~~r~   76 (115)
T 2cod_A            7 GKVKSGWLDKLSPQGKRMFQKRWVKFD--GLSISYYNNEKEMYSKGIIPLSAISTVRVQ----GDNKFEVV----TTQRT   76 (115)
T ss_dssp             CCCEEEEEEECCSSSSSCCEEEEEEEC--SSEEEEEESSCCSSCCCEEETTTEEEEEEE----TTTEEEEE----ESSCC
T ss_pred             CccEEEEEEEcCCCCCCCCceEEEEEE--CCEEEEEcCCCCcccCCEEECCcceEEEeC----CCCEEEEE----eCCcE
Confidence            4579999999998 7789999999999  999999999 88899999999998543322    26788875    35699


Q ss_pred             EEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         134 IYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       134 ~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      |+|+|+|.+++.+|+.+|+.+...
T Consensus        77 ~~l~a~s~~e~~~Wi~~l~~~~~~  100 (115)
T 2cod_A           77 FVFRVEKEEERNDWISILLNALKS  100 (115)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCHHHHHHHHHHHHHHHHh
Confidence            999999999999999999988643

>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1

Probab=99.76  E-value=4.3e-18  Score=135.43  Aligned_cols=97  Identities=21%  Similarity=0.394  Sum_probs=81.6

Q ss_pred             cccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEecc---CCCCCCceeEEEEeecCc
Q psy9639          55 ITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAP---SKIEHPHSLQLTFMKDGS  130 (321)
Q Consensus        55 ~~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~---~~~~~~~~~~i~~~~~~~  130 (321)
                      ....++|||.|+|+..+.|++|||||.  ++.|.||++ .+..|+|.|+|.++..+...   ...+.+++|+|.    +.
T Consensus        12 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~----~~   85 (125)
T 1eaz_A           12 SAVIKAGYCVKQGAVMKNWKRRYFQLD--ENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIV----TT   85 (125)
T ss_dssp             CCCSEEEEEEEECTTTCCEEEEEEEEC--SSEEEEESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEE----CS
T ss_pred             CCccEEEEEEEeCCCCCCcceEEEEEe--CCEEEEEcCCCCCcceeEEEcccceEEeeccccccCCcCCEEEEE----eC
Confidence            356899999999998999999999999  899999999 88999999999998654321   123467787774    45


Q ss_pred             eEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         131 TRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       131 ~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      .|+|+|+|+|++++.+|+.+|+.+...
T Consensus        86 ~r~~~l~a~s~~e~~~W~~al~~~i~~  112 (125)
T 1eaz_A           86 SRTFYVQADSPEEMHSWIKAVSGAIVA  112 (125)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence            699999999999999999999987654

>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.76  E-value=1.2e-17  Score=131.29  Aligned_cols=97  Identities=19%  Similarity=0.374  Sum_probs=80.3

Q ss_pred             cccceeeEEEeec-CCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEec-c-CCCCCCceeEEEEeecCc
Q psy9639          55 ITGHMDGFLMKRG-KESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIA-P-SKIEHPHSLQLTFMKDGS  130 (321)
Q Consensus        55 ~~~~~~G~L~K~g-~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~-~-~~~~~~~~~~i~~~~~~~  130 (321)
                      ....++|||+|+| ...+.|++|||||.  ++.|.||++ .+..|+|.|+|.++.+... + ...+.+++|+|.   ...
T Consensus         9 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~---~~~   83 (117)
T 2d9y_A            9 APVTKAGWLFKQASSGVKQWNKRWFVLV--DRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAE---HAG   83 (117)
T ss_dssp             CCCCEEEEEEEECTTSSSCEEEEEEEEE--TTEEEEESSTTCCSCCEEEECSSCEEEECCTTTTCCCSSEEEEE---CSS
T ss_pred             CCeeEEEEEEEeCCCCCCCceEEEEEEC--CCEEEEECCCCCCCcCCEEEeCCeEEEEcCccccCCCccEEEEE---cCC
Confidence            3567999999998 46789999999999  999999999 8899999999999865332 2 234567788763   234


Q ss_pred             eEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         131 TRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       131 ~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      .|+|+|+|+|++++.+|+.+|+.+..
T Consensus        84 ~r~~~l~a~s~~e~~~Wi~al~~~~~  109 (117)
T 2d9y_A           84 VRTYFFSAESPEEQEAWIQAMGEAAR  109 (117)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred             CcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence            59999999999999999999997643

>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1

Probab=99.76  E-value=3.2e-18  Score=132.34  Aligned_cols=94  Identities=22%  Similarity=0.376  Sum_probs=78.4

Q ss_pred             cceeeEEEeecCCC----CCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEecc---CCCCCCceeEEEEeec
Q psy9639          57 GHMDGFLMKRGKES----GKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAP---SKIEHPHSLQLTFMKD  128 (321)
Q Consensus        57 ~~~~G~L~K~g~~~----~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~---~~~~~~~~~~i~~~~~  128 (321)
                      ..++|||.|+|+..    +.|++|||||.  ++.|.||++ .+..|+|.|+|.++.+...+   ...+.+++|.|.   .
T Consensus         3 v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~---~   77 (108)
T 1u5d_A            3 VIKQGYLEKKSKDHSFFGSEWQKRWCVVS--RGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELT---S   77 (108)
T ss_dssp             EEEEEEEEEEEECSSSSCEEEEEEEEEEE--TTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEE---C
T ss_pred             ccEEEEEEEcCCCCCccccCceeeEEEEe--CCEEEEecCCCCCCCCEEEEecceEEEeCCccccccCCcceEEEE---c
Confidence            46899999999654    88999999999  999999999 88999999999999765543   233566788774   2


Q ss_pred             CceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         129 GSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       129 ~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      ...|+|+|+|+|++++.+|+.+|+.+.
T Consensus        78 ~~~r~~~l~a~s~~e~~~Wi~ai~~~i  104 (108)
T 1u5d_A           78 QDRRTYEFTATSPAEARDWVDQISFLL  104 (108)
T ss_dssp             SSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence            223899999999999999999998764

>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*

Probab=99.76  E-value=9.7e-18  Score=133.11  Aligned_cols=97  Identities=15%  Similarity=0.282  Sum_probs=79.4

Q ss_pred             cccceeeEEEeecC-CCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC--CCCCCceeEEEEeecCc
Q psy9639          55 ITGHMDGFLMKRGK-ESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS--KIEHPHSLQLTFMKDGS  130 (321)
Q Consensus        55 ~~~~~~G~L~K~g~-~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~--~~~~~~~~~i~~~~~~~  130 (321)
                      ....++|||+|+|+ ..+.|++|||||.  ++.|.||++ .+..|+|.|+|.++.+...+.  ..+.+++|.|.   ...
T Consensus         9 ~~~~~~G~L~K~~~~~~~~WkkR~fvL~--~~~L~yy~~~~~~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~---~~~   83 (123)
T 1upq_A            9 LPVHIRGWLHKQDSSGLRLWKRRWFVLS--GHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAE---HPG   83 (123)
T ss_dssp             SCEEEEEEEEEECSSSSCCEEEEEEEEE--TTEEEEESSTTCCSCCEEEEGGGCEEEECCSSCTTSSSSEEEEE---CTT
T ss_pred             CCceEEEEEEeeCCCCCCCceeEEEEEe--CCEEEEECCCCCcccceEEECCCCEEEECCCCccCCCcEEEEEE---CCC
Confidence            34679999999995 6789999999999  999999999 889999999999986554322  23456666653   233


Q ss_pred             eEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         131 TRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       131 ~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      .|+|+|+|+|++++.+|+.+|+.+..
T Consensus        84 ~r~~~l~a~s~~e~~~Wi~al~~a~~  109 (123)
T 1upq_A           84 MRTYVLAADTLEDLRGWLRALGRASR  109 (123)
T ss_dssp             SCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred             CeEEEEECCCHHHHHHHHHHHHHHHh
Confidence            49999999999999999999998754

>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}

Probab=99.76  E-value=1.1e-17  Score=133.20  Aligned_cols=94  Identities=21%  Similarity=0.349  Sum_probs=75.9

Q ss_pred             ceEEEEEEe-----CCCC-CCCcceEEEEEeCCeeEeeeCCC---------CCCcceeEEcccccCceEEecCCCCCCCC
Q psy9639         180 GREGWLWKT-----GPKN-ADAYRKRWFTLDYRKLMYHEEPL---------SAYPKGEIFLGHCSDGYTVRLGVPPGAKD  244 (321)
Q Consensus       180 ~k~G~L~K~-----g~~~-~~~WkkRwfvL~~~~L~Yyk~~~---------~~~~~g~i~L~~~~~~~~V~~~~~~~~~~  244 (321)
                      .++|+|.++     |++. .++|++|||+|+|+.|+||+...         +..|.|.|+|    +|+.|+..+  . ..
T Consensus         2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L----~g~~V~~~e--~-~~   74 (126)
T 2dtc_A            2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSI----VGWMVQLPD--D-PE   74 (126)
T ss_dssp             CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEEC----TTCEEECCC--C-TT
T ss_pred             ceeeeeeeeehhhcCCcccccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEe----CCCEEEecC--C-CC
Confidence            457888753     6652 47999999999999999999764         5689999999    678887422  2 24


Q ss_pred             CCceEEEEeC--CeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         245 QGFTFTLKTP--QRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       245 ~~~~F~i~t~--~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      ++++|+|.++  +.+|.|+|+|+++++.|++||+.||.
T Consensus        75 ~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~  112 (126)
T 2dtc_A           75 HPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACK  112 (126)
T ss_dssp             STTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence            7899999976  78999999999999999999988884

>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}

Probab=99.76  E-value=5.1e-18  Score=135.62  Aligned_cols=99  Identities=18%  Similarity=0.318  Sum_probs=72.8

Q ss_pred             CCCcceEEEEEEe-----CCCC-CCCcceEEEEEeCCeeEeeeCCCCC------------CcceeEEcccccCceEEecC
Q psy9639         176 TRDFGREGWLWKT-----GPKN-ADAYRKRWFTLDYRKLMYHEEPLSA------------YPKGEIFLGHCSDGYTVRLG  237 (321)
Q Consensus       176 ~~~~~k~G~L~K~-----g~~~-~~~WkkRwfvL~~~~L~Yyk~~~~~------------~~~g~i~L~~~~~~~~V~~~  237 (321)
                      +.++.++|||.++     |.+. .+.|++|||||+++.|+||+++.+.            .|.+.|+|.    ++.|...
T Consensus         5 ~~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~----~a~v~~~   80 (124)
T 3pp2_A            5 TKTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELR----GATLSWA   80 (124)
T ss_dssp             ----CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECT----TCEEEEC
T ss_pred             CCcEEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcC----CCEEEec
Confidence            4578999999986     3332 2589999999999999999988664            467888884    4555543


Q ss_pred             CCCCCCCCCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         238 VPPGAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       238 ~~~~~~~~~~~F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      . .+...++|+|.|.++ +++|+|+|+|+++|++||.+|++||
T Consensus        81 ~-~d~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI  122 (124)
T 3pp2_A           81 P-KDKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGI  122 (124)
T ss_dssp             C-GGGCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred             c-cccCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence            1 122356899999986 5899988888888888888888776

>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}

Probab=99.75  E-value=4.9e-18  Score=142.35  Aligned_cols=95  Identities=22%  Similarity=0.381  Sum_probs=74.6

Q ss_pred             ccceeeEEEeecCCC-----CCceeeEEEEeccCCeEEeecC--CCCCceeEEeccceEEEec-cC-C----CCCCceeE
Q psy9639          56 TGHMDGFLMKRGKES-----GKYHPRRFVLNEINDTIKYYVK--EKKEPKATLRISELNVVIA-PS-K----IEHPHSLQ  122 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~-----~~wk~R~fvL~~~~~~L~Yy~~--~~~~pkg~I~l~~~~~~~~-~~-~----~~~~~~~~  122 (321)
                      +.++||||+|||...     ++||+|||||.  ++.|.||++  +...|+|.|+|..+..+-. +. .    ....+.|+
T Consensus        14 ~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~--~~~L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~   91 (164)
T 2lul_A           14 NTILEEILIKRSQQKKKTSPLNYKERLFVLT--KSMLTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQ   91 (164)
T ss_dssp             SEEEEEEEEEECCCCSSSCCCCEEEEEEEEE--SSEEEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEE
T ss_pred             CeeEEEEEEEecCCCCCCCCCCceeEEEEEE--CCEEEEEeccCcccccccEEEEeeeEEEEeccccccCcccccceeEE
Confidence            568999999999754     46999999999  999999998  4567899999998765432 11 1    12334444


Q ss_pred             EEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         123 LTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       123 i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                          +.++.|+|||+|+|++|+.+|+++|+.+..
T Consensus        92 ----i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~  121 (164)
T 2lul_A           92 ----VVHDANTLYIFAPSPQSRDLWVKKLKEEIK  121 (164)
T ss_dssp             ----EECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             ----EecCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence                446679999999999999999999997754

>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A

Probab=99.75  E-value=7.3e-18  Score=138.63  Aligned_cols=100  Identities=15%  Similarity=0.216  Sum_probs=81.0

Q ss_pred             cccccceeeEEEeecCCC----CCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC---CCCCCceeEEE
Q psy9639          53 TYITGHMDGFLMKRGKES----GKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS---KIEHPHSLQLT  124 (321)
Q Consensus        53 ~~~~~~~~G~L~K~g~~~----~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~---~~~~~~~~~i~  124 (321)
                      ++....++|||+|+|+..    +.|++|||||.  ++.|.||++ .+..|+|.|+|.++.++..+.   ..+++++|+|.
T Consensus        13 ~~~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~--~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~   90 (148)
T 1u5f_A           13 DLPFVIKAGYLEKRRKDHSFLGFEWQKRWCALS--KTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEIC   90 (148)
T ss_dssp             GCSSEEEEEEEEEECCCSSCSSCSEEEEEEEEE--TTEEEEESSTTCSSCSEEEECTTCEEEECTTSCSSTTGGGEEEEE
T ss_pred             hCCCccEEEEEEEeCCCCCCcCCCceeEEEEEE--CCEEEEEcCCCCcccceEEEcCCcEEEECCCcccCCCCccEEEEE
Confidence            344668999999999754    59999999999  999999999 889999999999997654442   33446777764


Q ss_pred             EeecCceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         125 FMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       125 ~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      .   ...|+|+|+|+|.+++.+|+.+|+.+...
T Consensus        91 ~---~~~r~~~l~a~s~~e~~~Wi~al~~~i~~  120 (148)
T 1u5f_A           91 A---PDKRIYQFTAASPKDAEEWVQQLKFILQD  120 (148)
T ss_dssp             C---TTSCEEEEECSSHHHHHHHHHHHHHHCC-
T ss_pred             C---CCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence            2   23499999999999999999999987543

>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.75  E-value=5.5e-18  Score=132.87  Aligned_cols=95  Identities=8%  Similarity=0.156  Sum_probs=77.1

Q ss_pred             cceeeEEEeecCCCCCceeeEEEEeccC-CeEEeecC-CCCCceeEEeccceEEEe--ccCCCCCCceeEEEEeecCceE
Q psy9639          57 GHMDGFLMKRGKESGKYHPRRFVLNEIN-DTIKYYVK-EKKEPKATLRISELNVVI--APSKIEHPHSLQLTFMKDGSTR  132 (321)
Q Consensus        57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~-~~L~Yy~~-~~~~pkg~I~l~~~~~~~--~~~~~~~~~~~~i~~~~~~~~R  132 (321)
                      ..++|||.|+++ .+.|++|||||..++ .+|.||++ .+..|.|+|+|.++++..  .....++++.|+|.    .+.|
T Consensus         8 ~~~~G~L~k~~~-~~~WkkrWfVL~~~~~~~Ly~Yk~~~d~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~----~~~~   82 (112)
T 2coc_A            8 SLLCGPLRLSES-GETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQ----WAKQ   82 (112)
T ss_dssp             SSSEEEEEEESS-SSCEEEEEEECCTTCTTCEEEECCTTCSSSCSEECGGGCEEECCCSSSCCSSSEEEEEE----ETTE
T ss_pred             ceEEEEEEecCC-CCCceEEEEEEECCCccEEEEECCCCccCcceEEEcCCCEEEecCcccccCCCCEEEEe----cCCe
Confidence            467899999876 789999999998211 37999999 899999999999997653  22244577888885    3458


Q ss_pred             EEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         133 HIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       133 ~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      +|+|.|+|++++.+|+.+|+.+..
T Consensus        83 ~y~f~A~s~e~~~~Wl~al~~A~~  106 (112)
T 2coc_A           83 SWYLSASSAELQQQWLETLSTAAH  106 (112)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHHS
T ss_pred             EEEEEcCCHHHHHHHHHHHHHHhc
Confidence            999999999999999999987643

>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=99.75  E-value=1e-17  Score=134.23  Aligned_cols=96  Identities=18%  Similarity=0.385  Sum_probs=72.4

Q ss_pred             ccceeeEEEeec-CCCCCceeeEEEEeccCC-eEEeecC-----CCCCceeEEeccceEEEeccC---CCCCCceeEEEE
Q psy9639          56 TGHMDGFLMKRG-KESGKYHPRRFVLNEIND-TIKYYVK-----EKKEPKATLRISELNVVIAPS---KIEHPHSLQLTF  125 (321)
Q Consensus        56 ~~~~~G~L~K~g-~~~~~wk~R~fvL~~~~~-~L~Yy~~-----~~~~pkg~I~l~~~~~~~~~~---~~~~~~~~~i~~  125 (321)
                      .+.++|||.|+| ...+.|+||||||..+++ .|.||++     .+..|+|.|+|..+..+....   ....+++|    
T Consensus        14 ~~~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F----   89 (126)
T 1v5p_A           14 QNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCF----   89 (126)
T ss_dssp             CCCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEE----
T ss_pred             CCceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcccCCCCCEEE----
Confidence            456899999998 568999999999984335 4556675     357899999999865443211   22344555    


Q ss_pred             eecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         126 MKDGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       126 ~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      .+.++.|+|+|.|+|++|+.+||++|+.+.
T Consensus        90 ~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~  119 (126)
T 1v5p_A           90 VINALSQRYFLQANDQKDLKDWVEALNQAS  119 (126)
T ss_dssp             EEECSSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred             EEECCCEEEEEECCCHHHHHHHHHHHHHHH
Confidence            335677999999999999999999999764

>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.75  E-value=1.5e-17  Score=131.88  Aligned_cols=96  Identities=19%  Similarity=0.389  Sum_probs=79.2

Q ss_pred             cccceeeEEEeecC-CCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEec-c-CCCCCCceeEEEEeecCc
Q psy9639          55 ITGHMDGFLMKRGK-ESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIA-P-SKIEHPHSLQLTFMKDGS  130 (321)
Q Consensus        55 ~~~~~~G~L~K~g~-~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~-~-~~~~~~~~~~i~~~~~~~  130 (321)
                      ....++|||+|+|+ ..+.|++|||||.  ++.|.||++ .+..|+|.|+|.++.+... + ...+.+++|.|.   ...
T Consensus        20 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~---~~~   94 (122)
T 2yry_A           20 APVTKAGWLFKQASSGVKQWNKRWFVLV--DRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAE---HAG   94 (122)
T ss_dssp             CCEEEEEEEEEECCSSSCCEEEEEEEEE--TTEEEEESSTTCCSCCEEEESTTCCCEECCTTCSCSSSSEEEEE---CSS
T ss_pred             CCccEEEEEEEECCCCCCCcEEEEEEEe--CCEEEEECCCCCCCcccEEEcCCCEEEEcCccccCCcccEEEEe---cCC
Confidence            34679999999984 6789999999998  999999999 8899999999999854322 2 234567788763   234


Q ss_pred             eEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         131 TRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       131 ~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      .|+|+|+|+|++++.+|+.+|+.+.
T Consensus        95 ~r~~~l~a~s~~e~~~Wi~al~~a~  119 (122)
T 2yry_A           95 VRTYFFSAESPEEQEAWIQAMGEAA  119 (122)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCHHHHHHHHHHHHHHH
Confidence            5999999999999999999998764

>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A

Probab=99.75  E-value=1.1e-17  Score=134.07  Aligned_cols=98  Identities=20%  Similarity=0.354  Sum_probs=79.0

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC-----CCCCCceeEEEEeecC
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS-----KIEHPHSLQLTFMKDG  129 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~-----~~~~~~~~~i~~~~~~  129 (321)
                      ...++|||.|+|+..+.|++|||||..+.+.|.||++ .+..|+|.|+|.++.++....     +.+++++|.|..   .
T Consensus        17 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~---~   93 (129)
T 1x05_A           17 VIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIIT---A   93 (129)
T ss_dssp             EEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSCCSSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEEC---T
T ss_pred             CceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCCCCCcceeEEEccCCEEEEccCCccccccCCCeEEEEEc---C
Confidence            4689999999999999999999999931238999999 889999999999986543211     224678887742   2


Q ss_pred             ceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         130 STRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       130 ~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      ..|+|+|+|+|++++.+|+.+|+.+..
T Consensus        94 ~~~~~~l~a~s~~e~~~Wi~al~~~~~  120 (129)
T 1x05_A           94 DEVHYFLQAATPKERTEWIKAIQMASR  120 (129)
T ss_dssp             TCCCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence            347899999999999999999998754

>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.75  E-value=3.7e-18  Score=135.40  Aligned_cols=94  Identities=18%  Similarity=0.364  Sum_probs=76.4

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC--CCceeEEeccceEEEeccCCCCCCceeEEEEeecCc-e
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK--KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGS-T  131 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~--~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~-~  131 (321)
                      ...++|||+|+|+..+.|++|||||..+++.|.||++ .+  ..|+|.|+|.++.+...   ...+++|.|.    +. .
T Consensus         7 ~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~~~v~~~---~~~~~~F~i~----~~~~   79 (120)
T 2d9x_A            7 GENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAVISPS---DEDSHTFTVN----AASG   79 (120)
T ss_dssp             CCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTTCCEECC---SSSSSCEEEC----CSSS
T ss_pred             CCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCcccCCCccceEEcceEEEEec---CCCCCEEEEE----cCCC
Confidence            3578999999999889999999999833589999998 54  48999999999864322   1345777663    33 4


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      |+|+|+|+|++++.+|+++|+.+..
T Consensus        80 r~~~l~a~s~~e~~~Wi~al~~~~~  104 (120)
T 2d9x_A           80 EQYKLRATDAKERQHWVSRLQICTQ  104 (120)
T ss_dssp             CCEEECCSSHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998754

>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*

Probab=99.74  E-value=4e-18  Score=153.35  Aligned_cols=94  Identities=26%  Similarity=0.414  Sum_probs=78.6

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCC-------eeEeeeCCCC-----CCcceeEEcccccCceEEecCCCCCCC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYR-------KLMYHEEPLS-----AYPKGEIFLGHCSDGYTVRLGVPPGAK  243 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~-------~L~Yyk~~~~-----~~~~g~i~L~~~~~~~~V~~~~~~~~~  243 (321)
                      ..+++++|||.|+     +.||+|||||+++       .|+||+++.+     ..|+|.|+|..+   ..|.... .  .
T Consensus         7 ~~~v~k~G~L~K~-----K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~---~~V~~~~-~--~   75 (264)
T 1qqg_A            7 FSDVRKVGYLRKP-----KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESC---FNINKRA-D--S   75 (264)
T ss_dssp             --CEEEEEEEECT-----TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGE---EEEEEEC-C--S
T ss_pred             CCCccEEEEEEEC-----CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeece---EEEEecc-C--C
Confidence            3478999999998     5899999999988       9999999877     689999999765   2343321 1  2


Q ss_pred             CCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         244 DQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       244 ~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      .++++|.|.+++|+|+|+|+|++|+++||.+|+.++.
T Consensus        76 ~~~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~  112 (264)
T 1qqg_A           76 KNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHN  112 (264)
T ss_dssp             SCSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC-
T ss_pred             CCCcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999884

>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A

Probab=99.74  E-value=1.5e-17  Score=128.48  Aligned_cols=91  Identities=20%  Similarity=0.372  Sum_probs=75.2

Q ss_pred             eeeEEEeec--------CCCCCceeeEEEEeccCCeEEeecC-CC----C--CceeEEeccceEEEeccCCCCCCceeEE
Q psy9639          59 MDGFLMKRG--------KESGKYHPRRFVLNEINDTIKYYVK-EK----K--EPKATLRISELNVVIAPSKIEHPHSLQL  123 (321)
Q Consensus        59 ~~G~L~K~g--------~~~~~wk~R~fvL~~~~~~L~Yy~~-~~----~--~pkg~I~l~~~~~~~~~~~~~~~~~~~i  123 (321)
                      ++|||.|+|        ...++|++|||||.  ++.|.||++ .+    .  .|.+.|+|.++.+.+.+...+++++|+|
T Consensus         1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~--~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i   78 (106)
T 1btn_A            1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVIN--NQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKL   78 (106)
T ss_dssp             CEEEEEEEEEECSTTCBCSCCCCEEEEEEEE--TTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEECSSCCSSSSEEEE
T ss_pred             CccEEEEEEEEeCCCccCCCCChhEEEEEEE--CCEEEEEeCCcccccCCCCCCcceEECCCCEEEEcccccCCccEEEE
Confidence            589999999        67789999999999  999999999 52    2  3677888888766566666677889887


Q ss_pred             EEeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         124 TFMKDGSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       124 ~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      .   ....|+|+|+|+|++++.+|+.+|++|
T Consensus        79 ~---~~~~~~~~~~A~s~~e~~~Wi~ai~~A  106 (106)
T 1btn_A           79 R---LSDGNEYLFQAKDDEEMNTWIQAISSA  106 (106)
T ss_dssp             E---CTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred             E---ecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence            5   233499999999999999999999864

>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}

Probab=99.74  E-value=8.5e-18  Score=135.55  Aligned_cols=99  Identities=15%  Similarity=0.273  Sum_probs=78.6

Q ss_pred             ccceeeEEEee--cCCCCCceeeEEEEeccCCeEEeecC-C---CCCceeEEeccceEE---EeccC-CCCCCceeEEEE
Q psy9639          56 TGHMDGFLMKR--GKESGKYHPRRFVLNEINDTIKYYVK-E---KKEPKATLRISELNV---VIAPS-KIEHPHSLQLTF  125 (321)
Q Consensus        56 ~~~~~G~L~K~--g~~~~~wk~R~fvL~~~~~~L~Yy~~-~---~~~pkg~I~l~~~~~---~~~~~-~~~~~~~~~i~~  125 (321)
                      ...++|||.|+  |+..+.|++|||||.  ++.|.||++ +   ...|+|.|+|.++..   ...+. ..+.+++|.|..
T Consensus         4 ~v~~~G~L~K~~~~~~~~~WkrRwfvL~--~~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~   81 (134)
T 2y7b_A            4 SVEERGFLTIFEDVSGFGAWHRRWCVLS--GNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPANREFCARRNTFELIT   81 (134)
T ss_dssp             CCCEEEEEEEEEEETTEEEEEEEEEEEE--TTEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEE
T ss_pred             CceEEeeEEEEcCCCCCCCcEEEEEEEE--CCEEEEECCCCcccccCceEEEEhhhCccccccccchhhccCCCEEEEEe
Confidence            35789999999  777889999999999  899999996 4   489999999999752   12221 246789999865


Q ss_pred             eecC----------------ceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         126 MKDG----------------STRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       126 ~~~~----------------~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      ....                ..|+|+|+|+|++|+.+|+.+|+.+..
T Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~  128 (134)
T 2y7b_A           82 VRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLV  128 (134)
T ss_dssp             EEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             cCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHH
Confidence            3111                137899999999999999999998753

>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A

Probab=99.72  E-value=1e-17  Score=158.89  Aligned_cols=94  Identities=13%  Similarity=0.163  Sum_probs=70.7

Q ss_pred             CcceEEEEEEeCCC--CCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639         178 DFGREGWLWKTGPK--NADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ  255 (321)
Q Consensus       178 ~~~k~G~L~K~g~~--~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~  255 (321)
                      .++++|||+|+|..  ..+.|++|||+|+++.|+||++ .+..+.|.|+|.    +|+|.....   ..++|||+|++++
T Consensus       277 ~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~-~~~~~~~~i~l~----~~~v~~~~~---~~r~~~F~i~t~~  348 (385)
T 2q13_A          277 LTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQAR-GDVAGGLAMDID----NCSVMAVDC---EDRRYCFQITSFD  348 (385)
T ss_dssp             CSCCEEEEEEC--------CCEEEEEEEETTEEEEECS-SCSSCEEEEECT----TCEEEEECC---TTCSSEEEEECTT
T ss_pred             CccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecC-CCcCCCceEEcc----ceEEEeccc---cCCCceEEEEeCC
Confidence            57899999999875  2247999999999999999999 456788999994    466665432   3567999999998


Q ss_pred             --eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         256 --RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       256 --r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                        |+|+|+|+|++||+.||.||+.++
T Consensus       349 ~~~~~~l~A~s~~e~~~Wi~ai~~~~  374 (385)
T 2q13_A          349 GKKSSILQAESKKDHEEWICTINNIS  374 (385)
T ss_dssp             SCBCCCEECSSHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence              999976666666666666666655

>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*

Probab=99.72  E-value=6.1e-17  Score=130.24  Aligned_cols=96  Identities=13%  Similarity=0.272  Sum_probs=77.4

Q ss_pred             ccceeeEEEee-----cC-CCCCceeeEEEEeccCCeEEeecC-C-----------CCCceeEEeccceEEEeccCCCCC
Q psy9639          56 TGHMDGFLMKR-----GK-ESGKYHPRRFVLNEINDTIKYYVK-E-----------KKEPKATLRISELNVVIAPSKIEH  117 (321)
Q Consensus        56 ~~~~~G~L~K~-----g~-~~~~wk~R~fvL~~~~~~L~Yy~~-~-----------~~~pkg~I~l~~~~~~~~~~~~~~  117 (321)
                      ...++|||.|+     |+ ..++|++|||||.  ++.|.||++ .           +..|.|.|+|.++.+..+.+...+
T Consensus        11 ~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~--~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~kr   88 (129)
T 2p0d_A           11 EVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLT--GNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSR   88 (129)
T ss_dssp             SEEEEEEEEEEEEEETTEECCCCCEEEEEEEE--SSEEEEESCC--------------CCSEEEECTTCEEEECTTSCSS
T ss_pred             ceeEEEEEEEeeeccCCCcCCCCceEEEEEEe--CCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEECCCCCCC
Confidence            56799999995     53 2489999999999  999999999 4           458999999999976665555567


Q ss_pred             CceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         118 PHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       118 ~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      +|.|.|.   ....+.|+|+|+|++++.+|+.+|+.+..
T Consensus        89 ~~~F~l~---t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~  124 (129)
T 2p0d_A           89 RNVLHIR---TIPGHEFLLQSDHETELRAWHRALRTVIE  124 (129)
T ss_dssp             SSEEEEE---CTTSCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEE---cCCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence            7888874   22348899999999999999999987754

>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*

Probab=99.71  E-value=2.5e-17  Score=138.65  Aligned_cols=94  Identities=18%  Similarity=0.403  Sum_probs=72.4

Q ss_pred             cceeeEEEeecCC-----CCCceeeEEEEeccCCeEEeecC-----CCCCceeEEeccceEEEe-c-c--C-CCCC----
Q psy9639          57 GHMDGFLMKRGKE-----SGKYHPRRFVLNEINDTIKYYVK-----EKKEPKATLRISELNVVI-A-P--S-KIEH----  117 (321)
Q Consensus        57 ~~~~G~L~K~g~~-----~~~wk~R~fvL~~~~~~L~Yy~~-----~~~~pkg~I~l~~~~~~~-~-~--~-~~~~----  117 (321)
                      ..++|||.|+|+.     .++||+|||||.  ++.|.||++     .+..|+|.|+|.++..+- . +  + ..+.    
T Consensus         3 vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~--~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~   80 (169)
T 1btk_A            3 VILESIFLKRSQQKKKTSPLNFKKCLFLLT--VHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPR   80 (169)
T ss_dssp             CCEEEEEEEECCCSSTTCCCCEEEEEEEEC--SSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC--
T ss_pred             eEEEEEEEEecCCCCCcccCCCceEEEEEc--CCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhccccc
Confidence            5789999999853     368999999999  899999996     457899999999986432 2 1  1 1111    


Q ss_pred             -----------------CceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         118 -----------------PHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       118 -----------------~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                                       +++|+|.    +..|+|||+|+|++|+.+|+++|+.+..
T Consensus        81 ~~~~~~~~~~~~i~~~~~~~F~I~----t~~rt~yl~A~s~~E~~eWi~aI~~~i~  132 (169)
T 1btk_A           81 RGEESSEMEQISIIERFPYPFQVV----YDEGPLYVFSPTEELRKRWIHQLKNVIR  132 (169)
T ss_dssp             -------CCTTHHHHCCCEEEEEE----ETTCCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred             ccCcccccccccccccccccEEEE----eCCceEEEEcCCHHHHHHHHHHHHHHHH
Confidence                             1555553    3458999999999999999999997754

>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.71  E-value=3.6e-17  Score=134.63  Aligned_cols=96  Identities=15%  Similarity=0.234  Sum_probs=78.5

Q ss_pred             cccceeeEEEeecC------CCCCceeeEEEEeccCC-----eEEeecC-C-CCCceeEEeccceEEEeccCCCCCCcee
Q psy9639          55 ITGHMDGFLMKRGK------ESGKYHPRRFVLNEIND-----TIKYYVK-E-KKEPKATLRISELNVVIAPSKIEHPHSL  121 (321)
Q Consensus        55 ~~~~~~G~L~K~g~------~~~~wk~R~fvL~~~~~-----~L~Yy~~-~-~~~pkg~I~l~~~~~~~~~~~~~~~~~~  121 (321)
                      ....++|||.|+|.      ..+.|++|||||.  ++     .|.||++ . +..|+|+|+|.++..+..+ ..+.+++|
T Consensus        16 ~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~--~~~~g~~~L~yy~~~~~~~~~~g~I~L~~~~~~~~~-~~~~~~~F   92 (150)
T 1wg7_A           16 GGITKHGWLYKGNMNSAISVTMRSFKRRFFHLI--QLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQN-NKVRRFAF   92 (150)
T ss_dssp             CCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEE--ECSSSCEEEEEESSSCCSSCCSEEECTTTCCEECCC-CSSCTTEE
T ss_pred             CCeeEEEEEEEecCCccccccccCeeEEEEEEe--cCCCCceEEEEECCCCCCCCcCcEEecccCEEEecC-CCCCceEE
Confidence            34689999999994      4578999999998  55     9999999 6 8899999999998665432 24677888


Q ss_pred             EEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         122 QLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       122 ~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      .|..   ...|+|+|+|++.+++.+|+.+|+.+..
T Consensus        93 ~i~~---~~~r~~~l~A~s~~e~~~Wi~al~~ai~  124 (150)
T 1wg7_A           93 ELKM---QDKSSYLLAADSEVEMEEWITILNKILQ  124 (150)
T ss_dssp             EEEC---SSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             EEEe---CCCcEEEEEeCCHHHHHHHHHHHHHHHH
Confidence            7742   2249999999999999999999988754

>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.71  E-value=6.2e-17  Score=125.67  Aligned_cols=92  Identities=13%  Similarity=0.249  Sum_probs=71.5

Q ss_pred             cccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC-CCceeEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639          55 ITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK-KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR  132 (321)
Q Consensus        55 ~~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~-~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R  132 (321)
                      ....++|||.|+  ..+.|++|||||.  ++.|.||++ .+ ..|.+.|.|.++.+...+ ...++++|+|..   .+.|
T Consensus         6 ~~~~~~G~L~K~--~~k~Wk~RwfvL~--~~~L~yyk~~~~~~~~~~~i~l~~~~v~~~~-~~~~~~~F~i~~---~~~r   77 (107)
T 2cof_A            6 SGLETSSYLNVL--VNSQWKSRWCSVR--DNHLHFYQDRNRSKVAQQPLSLVGCEVVPDP-SPDHLYSFRILH---KGEE   77 (107)
T ss_dssp             CCCTTCCEEEEE--ETTEEEEEEEEEC--SSCEEEECSSTTCSEEEEEECTTTCEEECCC-BTTBSCEEEEEE---TTEE
T ss_pred             CCCcEeEEEEEe--cCCCcceEEEEEE--CCEEEEEeCCcccCCCeeEEeccceEEEECC-CCCCCeEEEEEe---CCCe
Confidence            356789999999  6789999999999  899999999 43 455556666665333332 245678888753   2379


Q ss_pred             EEEEEeCChHHHHHHHHHHHhh
Q psy9639         133 HIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       133 ~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      +|+|+|+|++++.+|+++|+.+
T Consensus        78 ~~~l~A~s~~e~~~Wi~al~~~   99 (107)
T 2cof_A           78 LAKLEAKSSEEMGHWLGLLLSE   99 (107)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHHHH
Confidence            9999999999999999999865

>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.70  E-value=5.9e-17  Score=129.68  Aligned_cols=97  Identities=21%  Similarity=0.362  Sum_probs=76.7

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC--CCCCceeEEeccceEEEeccCC------C--CCCceeEEEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK--EKKEPKATLRISELNVVIAPSK------I--EHPHSLQLTF  125 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~--~~~~pkg~I~l~~~~~~~~~~~------~--~~~~~~~i~~  125 (321)
                      ...++|||.|+|+..+.|++|||||..+++.|.||++  .+..|+|.|+|.++.+...+..      .  +.+++|+|. 
T Consensus        17 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~-   95 (129)
T 1x1g_A           17 TVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVI-   95 (129)
T ss_dssp             EEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEEC-
T ss_pred             CEEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCCCcCCccceEEECcCCEEEEeCCCCCcccccCCCCCceEEEE-
Confidence            4579999999999999999999999842379999998  6889999999998754332211      0  146777763 


Q ss_pred             eecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         126 MKDGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       126 ~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                        ....|+|+|+|+|++++.+|+.+|+.+.
T Consensus        96 --~~~~r~~~l~a~s~~e~~~Wi~al~~~~  123 (129)
T 1x1g_A           96 --TKDDTHYYIQASSKAERAEWIEAIKKLT  123 (129)
T ss_dssp             --CTTCCCEEECCSSHHHHHHHHHHHHHHS
T ss_pred             --cCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence              2234789999999999999999999764

>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}

Probab=99.70  E-value=3.6e-17  Score=156.23  Aligned_cols=95  Identities=19%  Similarity=0.208  Sum_probs=73.3

Q ss_pred             CCcceEEEEEEe---CCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe
Q psy9639         177 RDFGREGWLWKT---GPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT  253 (321)
Q Consensus       177 ~~~~k~G~L~K~---g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t  253 (321)
                      ..+.|+|||+|+   |... +.|+||||+|+++.|+||+.... .+.+.|+|    .+|+|.....   .+++|||+|++
T Consensus       299 ~~~~k~G~L~k~~~~g~~~-~~W~rrwfvl~~~~l~y~~~~~~-~~~~~~~l----~~~~v~~~~~---~~r~~cF~i~~  369 (407)
T 4h8s_A          299 NLIQKAGYLNLRNKTGLVT-TTWERLYFFTQGGNLMCQPRGAV-AGGLIQDL----DNCSVMAVDC---EDRRYCFQITT  369 (407)
T ss_dssp             SCSCCEEEEEEEEECSSSC-EEEEEEEEEECSSCEECCCTTCS-SCCCCBCS----SCCEEEEECC---TTCSSEEEEEC
T ss_pred             CcceeeceeeeeccCCCCC-CCceEEEEEEECCEEEEEeCCCC-CCCeEEEC----CceEEEECCC---CCCCceEEEEe
Confidence            457899999998   4444 78999999999999999987654 57788888    4577776432   25789999999


Q ss_pred             CC--eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         254 PQ--RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       254 ~~--r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      ++  |+|+|+|+|++||+.||.||+.++.
T Consensus       370 ~~~~~~~~l~A~s~~e~~~Wi~ai~~a~~  398 (407)
T 4h8s_A          370 PNGKSGIILQAESRKENEEWICAINNISR  398 (407)
T ss_dssp             TTSSCCEEEECSSSHHHHHHHHHHHHHHS
T ss_pred             cCCCceEEEEcCCHHHHHHHHHHHHHHHH
Confidence            85  7999777777777777777776664

>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A

Probab=99.70  E-value=1.1e-16  Score=139.55  Aligned_cols=99  Identities=15%  Similarity=0.218  Sum_probs=81.6

Q ss_pred             cccccceeeEEEeecCC----CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC---CCCCCceeEEE
Q psy9639          53 TYITGHMDGFLMKRGKE----SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS---KIEHPHSLQLT  124 (321)
Q Consensus        53 ~~~~~~~~G~L~K~g~~----~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~---~~~~~~~~~i~  124 (321)
                      ++....++|||+|+|+.    .+.|++|||||.  ++.|.||++ .+..|+|.|+|.++.++..+.   ..+++++|+|.
T Consensus       102 ~l~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~--~~~L~Yyk~~~~~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~  179 (211)
T 1u5e_A          102 DLPFVIKAGYLEKRRKDHSFLGFEWQKRWCALS--KTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEIC  179 (211)
T ss_dssp             GCSSEEEEEEEEEEEHHHHTTTCCCEEEEEEEE--TTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEE
T ss_pred             hcCCccEEEEEEEECCCCCcCCCCcEeEEEEEE--CCEEEEEcCCCCccceEEEEeCCcEEEEcCCccccCCCCCEEEEE
Confidence            34467899999999973    579999999999  999999999 889999999999997765432   23456788774


Q ss_pred             EeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         125 FMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       125 ~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      .   ...|+|+|+|+|.+++.+|+.+|+.+..
T Consensus       180 t---~~~r~~~l~A~s~~e~~~Wi~aL~~ai~  208 (211)
T 1u5e_A          180 A---PDKRIYQFTAASPKDAEEWVQQLKFILQ  208 (211)
T ss_dssp             C---SSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             c---CCCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence            2   2359999999999999999999997743

>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A

Probab=99.69  E-value=1.1e-16  Score=134.39  Aligned_cols=94  Identities=17%  Similarity=0.288  Sum_probs=65.4

Q ss_pred             ccceeeEEE----------eecCCCCCceeeEEEEeccCCeEEeecC-CC--CCceeEEeccce--EEEeccCCCCCCce
Q psy9639          56 TGHMDGFLM----------KRGKESGKYHPRRFVLNEINDTIKYYVK-EK--KEPKATLRISEL--NVVIAPSKIEHPHS  120 (321)
Q Consensus        56 ~~~~~G~L~----------K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~--~~pkg~I~l~~~--~~~~~~~~~~~~~~  120 (321)
                      ...++|||+          |+|...+.|++|||||.  ++.|.||++ .+  ..|+|.|+|...  .+.+.+...+++++
T Consensus         2 dv~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~--~~~L~yyk~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~   79 (168)
T 2j59_M            2 DAAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLR--GHSLYLYKDKREQTTPSEEEQPISVNACLIDISYSETKRKNV   79 (168)
T ss_dssp             -CCEEEEEEEEECC------------CCEEEEEEEE--TTEEEEESCTTCC--------CEECSSCEEEECSSSCSCSSE
T ss_pred             CCcEEEEEeeeeecccCCcccCCCCCCceEEEEEEe--CCEEEEEECCcccccccCCceEecccceEEEeccccCCCCCE
Confidence            357899999          67777889999999999  999999999 55  688999998873  23344555567888


Q ss_pred             eEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         121 LQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       121 ~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      |+|.    ++.|+|+|+|+|++++.+|+++|+.+.
T Consensus        80 F~I~----t~~r~~~l~A~s~~e~~~Wi~ai~~~~  110 (168)
T 2j59_M           80 FRLT----TSDCECLFQAEDRDDMLAWIKTIQESS  110 (168)
T ss_dssp             EEEE----CSSCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred             EEEE----eCCceEEEEcCCHHHHHHHHHHHHHHH
Confidence            8875    334899999999999999999998774

>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}

Probab=99.69  E-value=6.1e-17  Score=147.42  Aligned_cols=100  Identities=16%  Similarity=0.223  Sum_probs=78.7

Q ss_pred             CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCC---CCCCCCceEEEEeC
Q psy9639         178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP---GAKDQGFTFTLKTP  254 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~---~~~~~~~~F~i~t~  254 (321)
                      .+.++|||+|+|... +.|++|||||+++.|+||+++.+..++|.|+|.... ++.|......   .....+|||.|.++
T Consensus       167 ~p~~~G~L~k~~~~~-k~WkkR~fvL~~~~L~yyk~~~~~~~~~~i~l~~l~-~~~v~~~~~~~~~~~~~~~~~F~i~~~  244 (291)
T 3tca_A          167 VPELEGALYLKEDGK-KSWKRRYFLLRASGIYYVPKGKTKTSRDLACFIQFE-NVNIYYGIQCKMKYKAPTDHCFVLKHP  244 (291)
T ss_dssp             CCCCEEEEEEECTTS-SCEEEEEEEECSSEEEECCTTCCSSTTTCEEEEEGG-GCEEEEECSHHHHHCCSSSCEEEEECT
T ss_pred             CCceEEEEEEeCCCC-CCceEEEEEEeCCEEEEEecCccccccCceeeccce-eEEEEecCccccccCCCCCeEEEEEcC
Confidence            457899999999887 899999999999999999999999999999886652 3444322110   01135799999986


Q ss_pred             C------eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         255 Q------RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       255 ~------r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +      ++|+|+|+|++++..||.||+.|.
T Consensus       245 ~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak  275 (291)
T 3tca_A          245 QIQKESQYIKYLCCDDARTLSQWVMGIRIAK  275 (291)
T ss_dssp             TCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence            4      679999999999999999988764

>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}

Probab=99.69  E-value=6e-17  Score=127.97  Aligned_cols=95  Identities=16%  Similarity=0.302  Sum_probs=70.4

Q ss_pred             eEEEEEE--eCCCCCC-CcceEEEEEeCCeeEeeeCCCCC---CcceeEEcccccCceEEecCCC-----CCCCCCCceE
Q psy9639         181 REGWLWK--TGPKNAD-AYRKRWFTLDYRKLMYHEEPLSA---YPKGEIFLGHCSDGYTVRLGVP-----PGAKDQGFTF  249 (321)
Q Consensus       181 k~G~L~K--~g~~~~~-~WkkRwfvL~~~~L~Yyk~~~~~---~~~g~i~L~~~~~~~~V~~~~~-----~~~~~~~~~F  249 (321)
                      .+|||.+  +|+.. + +|++|||+|++..|+||+++.+.   .|.|.|+|...   +.|+.+.+     ......++.|
T Consensus         3 ~eGwl~~pk~~~~~-k~~Wkkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~---~~V~~V~~~d~i~~~~~~~p~iF   78 (117)
T 2rov_A            3 LEGWLSLPVRNNTK-KFGWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKL---FHVRPVTQTDVYRADAKEIPRIF   78 (117)
T ss_dssp             SEEEEECCCCSSSS-CCCCCEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGE---EEEEECCTTTCSSSCTTTGGGEE
T ss_pred             eEEEEEeecCCCcc-CCCcEEEEEEEECCEEEEEECCCCcccCCceEEEECccc---EEEEEcccccccccccccCCcEE
Confidence            4899996  66655 6 89999999999999999987643   78999999654   34443321     1112235789


Q ss_pred             EEEeC------CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         250 TLKTP------QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       250 ~i~t~------~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +|.++      .++++|.|+|++|+++||.+|+.+|
T Consensus        79 ~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i  114 (117)
T 2rov_A           79 QILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKI  114 (117)
T ss_dssp             EEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHC
T ss_pred             EEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence            99863      5999987777777777777777665

>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.68  E-value=1.8e-16  Score=126.15  Aligned_cols=97  Identities=11%  Similarity=0.255  Sum_probs=76.2

Q ss_pred             cccceeeEEEeecCC--------CCCceeeEEEEeccCCeEEeecC-CCC----Cce--eEEeccceEEEeccCCCCCCc
Q psy9639          55 ITGHMDGFLMKRGKE--------SGKYHPRRFVLNEINDTIKYYVK-EKK----EPK--ATLRISELNVVIAPSKIEHPH  119 (321)
Q Consensus        55 ~~~~~~G~L~K~g~~--------~~~wk~R~fvL~~~~~~L~Yy~~-~~~----~pk--g~I~l~~~~~~~~~~~~~~~~  119 (321)
                      ....++|||.|++..        .+.|++|||||.  ++.|.||++ .+.    .|+  ..|+|.++.+..+++...++|
T Consensus         6 ~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~--~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~r~~   83 (123)
T 1wjm_A            6 SGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLR--RGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKH   83 (123)
T ss_dssp             CCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEE--TTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECTTCSSCSS
T ss_pred             CCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEE--CCEEEEEEcccccccCcccCCCceEEccCcEEeecccccCCCC
Confidence            356899999999864        789999999999  999999999 432    234  467777665555555566888


Q ss_pred             eeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       120 ~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      +|.|..   ...|+|+|+|+|++++.+|+.+|+.+..
T Consensus        84 ~F~i~~---~~~~~~~f~A~s~~e~~~Wi~ai~~~~~  117 (123)
T 1wjm_A           84 VFKLGL---QDGKEYLFQAKDEAEMSSWLRVVNAAIA  117 (123)
T ss_dssp             EEEEEC---SSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             EEEEEE---cCCcEEEEECCCHHHHHHHHHHHHHHHh
Confidence            988752   2348999999999999999999987754

>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*

Probab=99.67  E-value=7.3e-17  Score=152.81  Aligned_cols=95  Identities=21%  Similarity=0.324  Sum_probs=75.4

Q ss_pred             CcceEEEEEEeCCCCCCCcceEEEEE--eCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEE---
Q psy9639         178 DFGREGWLWKTGPKNADAYRKRWFTL--DYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLK---  252 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~~~~WkkRwfvL--~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~---  252 (321)
                      ..+++|||+|+|+.. +.|++|||||  +++.|+||+++.+..|+|.|.|..+    .+.. .+ ...+++++|.|.   
T Consensus       145 ~~~keG~L~KrG~~~-k~WkrRwFVL~~~~~~L~Yy~~~~~~~p~g~I~L~~~----~~~~-~~-~~~~~~~~f~I~~~~  217 (386)
T 3lju_X          145 AGYREGFLWKRGRDN-GQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHL----NATF-QP-AKIGHPHGLQVTYLK  217 (386)
T ss_dssp             SSEEEEEEEEECSSS-CCEEEEEEEEETTTTEEEEEC-----CCSEEEEGGGE----EEEE-CH-HHHTSTTCEEEEEEE
T ss_pred             ccccccceeeecccc-CCceEEEEEEEcCCCEEEEECCCCccCcccEEEeecc----EEEE-cc-cccCCCceEEEEEec
Confidence            457999999999998 8999999999  8999999999999999999999663    2222 11 112467899998   


Q ss_pred             -eCCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         253 -TPQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       253 -t~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                       ++.|+|+|+|+|+++|.+||++|+.|.
T Consensus       218 ~~~~R~y~l~A~s~~e~~~Wi~aIr~a~  245 (386)
T 3lju_X          218 DNSTRNIFIYHEDGKEIVDWFNALRAAR  245 (386)
T ss_dssp             TTEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEEcCCHHHHHHHHHhhhhcc
Confidence             678999999999999999999999873

>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}

Probab=99.67  E-value=1.3e-16  Score=127.87  Aligned_cols=99  Identities=14%  Similarity=0.210  Sum_probs=67.2

Q ss_pred             cceeeEEEee-cC-CCCCceeeEEEEeccCCeEEeecC-CC---CCceeEEeccceEEEec-------------------
Q psy9639          57 GHMDGFLMKR-GK-ESGKYHPRRFVLNEINDTIKYYVK-EK---KEPKATLRISELNVVIA-------------------  111 (321)
Q Consensus        57 ~~~~G~L~K~-g~-~~~~wk~R~fvL~~~~~~L~Yy~~-~~---~~pkg~I~l~~~~~~~~-------------------  111 (321)
                      ..++|||.|+ |+ ..++|++|||||.. ++.|.||++ .+   ....+.|+|..+.....                   
T Consensus         4 ~~k~G~L~K~~g~~~~k~WkkRwFvL~~-~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~~   82 (128)
T 2rlo_A            4 PIKQSFLLKRSGNSLNKEWKKKYVTLSS-NGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGSA   82 (128)
T ss_dssp             EEEEEEEEEECSCSTTCCEEEEEEEEET-TTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCCC
T ss_pred             ceeEEEEEEecCCCccCCccEEEEEEeC-CCEEEEecchhhhccccCCCeeeeeeeEEecCCCccccccccccccccccc
Confidence            4689999999 53 57999999999982 478888875 22   22233455544322111                   


Q ss_pred             cCCCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhhhhc
Q psy9639         112 PSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRL  159 (321)
Q Consensus       112 ~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~~l  159 (321)
                      +.....+++|+|.   ....|+|+|+|+|++|+.+|+.+|+.+....|
T Consensus        83 ~~~~~~~~~F~I~---t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~~l  127 (128)
T 2rlo_A           83 GQAEEENFEFLIV---SSTGQTWHFEAASFEERDAWVQAIESQILASL  127 (128)
T ss_dssp             SSCCCCCCCEEEE---CTTSCEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCceEEEE---cCCCCEEEEEcCCHHHHHHHHHHHHHHHHHHc
Confidence            1011456677663   22339999999999999999999998866543

>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*

Probab=99.67  E-value=6.3e-16  Score=144.49  Aligned_cols=99  Identities=17%  Similarity=0.385  Sum_probs=82.9

Q ss_pred             cccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEee------
Q psy9639          55 ITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMK------  127 (321)
Q Consensus        55 ~~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~------  127 (321)
                      .+..++|||+|+|+..+.|++|||||.  ++.|.||++ .+..|+|+|+|.++.+... ...+.+++|+|....      
T Consensus       211 ~~~~k~G~L~K~g~~~k~WkkRwFVL~--~~~L~Yyk~~~~~~p~G~I~L~~~~v~~~-~~~~~~~~F~I~~~~~~~~~~  287 (347)
T 2r09_A          211 FNPDREGWLLKLGGRVKTWKRRWFILT--DNCLYYFEYTTDKEPRGIIPLENLSIREV-EDPRKPNCFELYNPSHKGQVI  287 (347)
T ss_dssp             CCCCEEEEEEEECSSSCCEEEEEEEEE--TTEEEEESSTTCSSCSEEEECTTCEEEEE-CCSSCSSEEEEECSSSTTCCC
T ss_pred             cccccCCeeEecCCCcccceeEEEEEc--CCEEEEEcCCCccCCcEEEEcCCeEEEEc-cCCCCCCEEEEEeCCcccccc
Confidence            346899999999999999999999999  999999999 8899999999999864433 335678899885321      


Q ss_pred             ------------cCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         128 ------------DGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       128 ------------~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                                  .+..|+|+|+|+|++|+.+|+.+|+.+..
T Consensus       288 ~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~  328 (347)
T 2r09_A          288 KACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS  328 (347)
T ss_dssp             CCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence                        12358999999999999999999998754

>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1

Probab=99.64  E-value=1e-15  Score=124.21  Aligned_cols=94  Identities=21%  Similarity=0.411  Sum_probs=70.3

Q ss_pred             ceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCC----------------------------------CCCc------
Q psy9639         180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPL----------------------------------SAYP------  219 (321)
Q Consensus       180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~----------------------------------~~~~------  219 (321)
                      +|.|||+++++.. +.|++|||||+++.|+|++...                                  ...|      
T Consensus         2 ~k~G~L~~~~~~~-~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~l~   80 (150)
T 2fjl_A            2 IKNGILYLEDPVN-HEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREHLD   80 (150)
T ss_dssp             CEEEEEEEEETTT-TEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSSSC
T ss_pred             CcceEEEeecCCC-CCceEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhccc
Confidence            6899999999887 8999999999999999987111                                  0111      


Q ss_pred             ---------ceeEEcccccCceEEecCCCCCCCCCCceEEEEeC---CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         220 ---------KGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP---QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       220 ---------~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~---~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                               +|.|+|    .||.|.... ....+++|+|+|.++   .++|.|.|+|.++|..||+||+.|+
T Consensus        81 E~~~lG~l~kG~IdL----~gc~V~~~~-~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa  147 (150)
T 2fjl_A           81 ENSPLGDLLRGVLDV----PACQIAIRP-EGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVA  147 (150)
T ss_dssp             TTTTTTTCCCEEECS----TTCEEEEET-TCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred             ccccccccccceEec----CccEEEecc-CCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHH
Confidence                     799999    678887632 232357899999987   4699966666666666666666654

>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.64  E-value=4.1e-16  Score=124.17  Aligned_cols=97  Identities=19%  Similarity=0.272  Sum_probs=79.8

Q ss_pred             CCcceEEEEEEeCCCC--CCCcceEEEEEeCCeeEeeeCCCCC--CcceeEEcccccCceEEecCCCCCCCCCCceEEEE
Q psy9639         177 RDFGREGWLWKTGPKN--ADAYRKRWFTLDYRKLMYHEEPLSA--YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLK  252 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~--~~~WkkRwfvL~~~~L~Yyk~~~~~--~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~  252 (321)
                      ..+...+||...+++.  .++||+|||+|+++.|+||++..+.  .|.|.|+|    .||.|.+..  +....+|+|.+.
T Consensus         7 ~~pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee~~~ePig~I~L----~gceV~pd~--~~~~~kf~ikl~   80 (137)
T 2ys3_A            7 GIPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEAPGDPIQQLNL----KGCEVVPDV--NVSGQKFCIKLL   80 (137)
T ss_dssp             SCCCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTTTTSCCSCCBCT----TTCEEEECC--BGGGTBEEEEEE
T ss_pred             CCcchhHHHHhhCccccccccceeEEEEEeCCEEEEECCchhccCCCceEEEC----CCCEEeccc--cccCCceEEEEE
Confidence            3456789999887764  3589999999999999999998886  89999999    678887753  223567888887


Q ss_pred             eCC----eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         253 TPQ----RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       253 t~~----r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .|.    |+|+|.|+|++++.+||.||+.|.
T Consensus        81 iPs~~g~r~y~l~cdsEeqy~~WMaA~rlAs  111 (137)
T 2ys3_A           81 VPSPEGMSEIYLRCQDEQQYARWMAGCRLAS  111 (137)
T ss_dssp             EECSSSEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             ccCCCCceEEEEECCCHHHHHHHHHHHHHhc
Confidence            663    999999999999999999998876

>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=6.7e-15  Score=114.93  Aligned_cols=99  Identities=22%  Similarity=0.299  Sum_probs=76.1

Q ss_pred             CCCcceEEEEEEeCC-CCCCCcceEEEEEeC------CeeEeeeCCCCC----CcceeEEcccccCceEEecCCCC-CCC
Q psy9639         176 TRDFGREGWLWKTGP-KNADAYRKRWFTLDY------RKLMYHEEPLSA----YPKGEIFLGHCSDGYTVRLGVPP-GAK  243 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~-~~~~~WkkRwfvL~~------~~L~Yyk~~~~~----~~~g~i~L~~~~~~~~V~~~~~~-~~~  243 (321)
                      ..+++|+|||+++.. +..+.|+||||+|..      .+|-||+++...    .++.+|.|..|   .+|.+.... +..
T Consensus         9 ~e~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdC---isV~~~~~e~~~p   85 (127)
T 2d9w_A            9 GDGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDC---LRVAEAGGEASSP   85 (127)
T ss_dssp             CCCSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGE---EEEEECCSCSSSC
T ss_pred             cCccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhC---CeEecccCccCCC
Confidence            457899999999875 444789999999973      589999987542    57899999886   556664322 223


Q ss_pred             CCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         244 DQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       244 ~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      ...+.|.|.|++|+|+|+|+++ |+..||++|...
T Consensus        86 k~~~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~  119 (127)
T 2d9w_A           86 RDTSAFFLETKERLYLLAAPAA-ERGDWVQAICLL  119 (127)
T ss_dssp             SSCEEEEEEESSCEEEEEECHH-HHHHHHHHHHHH
T ss_pred             CcceEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHH
Confidence            4568999999999999888864 788888888663

>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A

Probab=99.61  E-value=2.6e-15  Score=135.00  Aligned_cols=97  Identities=20%  Similarity=0.259  Sum_probs=79.2

Q ss_pred             ccceeeEEE--------eecCC----CCCceeeEEEEeccCCeEEeecC-C------CCCceeEEeccceEEEeccCCCC
Q psy9639          56 TGHMDGFLM--------KRGKE----SGKYHPRRFVLNEINDTIKYYVK-E------KKEPKATLRISELNVVIAPSKIE  116 (321)
Q Consensus        56 ~~~~~G~L~--------K~g~~----~~~wk~R~fvL~~~~~~L~Yy~~-~------~~~pkg~I~l~~~~~~~~~~~~~  116 (321)
                      ...++|||.        |+|+.    .++|++|||||.  ++.|.||++ .      +..|.|.|+|.++.+...++...
T Consensus        10 ~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~--~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~k   87 (263)
T 3a8p_A           10 VVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLK--GCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSVPEHPK   87 (263)
T ss_dssp             CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEE--TTEEEEESSCCC------CCCSEEEECTTCEEEECTTCSS
T ss_pred             CeEEEEEeeecccccccCCCCccCccCCCceEEEEEEc--CCEEEEEecCcccccccccCccceEEcCCcEEEECCcCCC
Confidence            357999999        67776    789999999999  899999997 2      46899999999876554555556


Q ss_pred             CCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         117 HPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       117 ~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      ++|+|+|..   ...|+|+|+|+|++++.+|+.+|+.+...
T Consensus        88 k~~~F~I~t---~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~  125 (263)
T 3a8p_A           88 KEHVFCLSN---SCGDVYLFQATSQTDLENWVTAIHSACAS  125 (263)
T ss_dssp             CSSEEEEEC---TTSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEc---CCCcEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence            788888752   24589999999999999999999887654

>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}

Probab=99.61  E-value=8.8e-16  Score=139.70  Aligned_cols=98  Identities=19%  Similarity=0.342  Sum_probs=77.8

Q ss_pred             cceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceE---EEeccC-----CCCCCceeEEEEee
Q psy9639          57 GHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELN---VVIAPS-----KIEHPHSLQLTFMK  127 (321)
Q Consensus        57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~---~~~~~~-----~~~~~~~~~i~~~~  127 (321)
                      ..++|||+|+|...++|++|||||.  ++.|.||++ .+..|+|.|.|.++.   +.....     ..+.+++|.|....
T Consensus       168 p~~~G~L~k~~~~~k~WkkR~fvL~--~~~L~yyk~~~~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~  245 (291)
T 3tca_A          168 PELEGALYLKEDGKKSWKRRYFLLR--ASGIYYVPKGKTKTSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQ  245 (291)
T ss_dssp             CCCEEEEEEECTTSSCEEEEEEEEC--SSEEEECCTTCCSSTTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEEECTT
T ss_pred             CceEEEEEEeCCCCCCceEEEEEEe--CCEEEEEecCccccccCceeeccceeEEEEecCccccccCCCCCeEEEEEcCC
Confidence            4689999999999999999999999  999999999 889999988876543   221111     23457888875321


Q ss_pred             --cCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         128 --DGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       128 --~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                        .+..|++||+|+|++++..|+.|||.|+.
T Consensus       246 ~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak~  276 (291)
T 3tca_A          246 IQKESQYIKYLCCDDARTLSQWVMGIRIAKY  276 (291)
T ss_dssp             CCSCCTTSEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence              23457899999999999999999998875

>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1

Probab=99.61  E-value=1.4e-15  Score=120.90  Aligned_cols=95  Identities=8%  Similarity=0.268  Sum_probs=75.3

Q ss_pred             ccceeeEEEeecC--------CCCCceeeEEEEeccCCeEEeecC-CCCCc--------eeEEeccceEEEeccCCCCCC
Q psy9639          56 TGHMDGFLMKRGK--------ESGKYHPRRFVLNEINDTIKYYVK-EKKEP--------KATLRISELNVVIAPSKIEHP  118 (321)
Q Consensus        56 ~~~~~G~L~K~g~--------~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~p--------kg~I~l~~~~~~~~~~~~~~~  118 (321)
                      ...++|||+|++.        ..+.|++|||||.  ++.|.||++ .+..+        .+.|+|.++.+..+++...++
T Consensus         7 ~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~--~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~kr~   84 (122)
T 1dro_A            7 GEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAK--AGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKK   84 (122)
T ss_dssp             SSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEES--SSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSSSSST
T ss_pred             ceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEE--CCEEEEEeCCcccccCCCcccCCCceEECCCCEEEeCCCCCCCC
Confidence            4679999998754        3578999999999  999999999 54433        367888887555555555678


Q ss_pred             ceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       119 ~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      |.|+|.   ....++|+|+|+|++++.+|+.+|+.+.
T Consensus        85 ~~F~l~---t~~~~~~lfqA~s~~e~~~Wi~ai~~~i  118 (122)
T 1dro_A           85 HVLRVK---LANGALFLLQAHDDTEMSQWVTSLKAQS  118 (122)
T ss_dssp             TEEEEE---CSSSCEEEEECSSSHHHHHHHHHHHHHH
T ss_pred             eEEEEE---EcCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence            898875   2345899999999999999999998764

>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*

Probab=99.60  E-value=2.1e-15  Score=135.52  Aligned_cols=92  Identities=21%  Similarity=0.353  Sum_probs=74.7

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCC-------eEEeecC-CC-----CCceeEEeccceEEEeccCCCCCCceeE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEIND-------TIKYYVK-EK-----KEPKATLRISELNVVIAPSKIEHPHSLQ  122 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~-------~L~Yy~~-~~-----~~pkg~I~l~~~~~~~~~~~~~~~~~~~  122 (321)
                      ...++|||.|+    ++||+|||||.  ++       .|.||++ .+     ..|+|+|+|.++..+.......++++|.
T Consensus         9 ~v~k~G~L~K~----K~WkkRwFVL~--~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~~~~~~~~F~   82 (264)
T 1qqg_A            9 DVRKVGYLRKP----KSMHKRFFVLR--AASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRADSKNKHLVA   82 (264)
T ss_dssp             CEEEEEEEECT----TTCCEEEEEEE--CCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECCSSCSSEEE
T ss_pred             CccEEEEEEEC----CCCEeEEEEEE--CCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEeccCCCCCcEEE
Confidence            45799999999    78999999999  55       9999999 65     6899999999986443222345678888


Q ss_pred             EEEeecCceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         123 LTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       123 i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      |.    +..|+|+|.|+|++++.+|+.+|+.+...
T Consensus        83 I~----t~~rty~l~A~se~e~~~Wi~aL~~~~~~  113 (264)
T 1qqg_A           83 LY----TRDEHFAIAADSEAEQDSWYQALLQLHNR  113 (264)
T ss_dssp             EE----ESSCEEEEECSSHHHHHHHHHHHHHHC--
T ss_pred             EE----ECCEEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence            75    34699999999999999999999887543

>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}

Probab=99.58  E-value=1.6e-14  Score=115.19  Aligned_cols=95  Identities=20%  Similarity=0.357  Sum_probs=75.8

Q ss_pred             ccceeeEEEee-----cCC--CCCceeeEEEEeccCCeEEeecC-CCC------------CceeEEeccceEEEecc-CC
Q psy9639          56 TGHMDGFLMKR-----GKE--SGKYHPRRFVLNEINDTIKYYVK-EKK------------EPKATLRISELNVVIAP-SK  114 (321)
Q Consensus        56 ~~~~~G~L~K~-----g~~--~~~wk~R~fvL~~~~~~L~Yy~~-~~~------------~pkg~I~l~~~~~~~~~-~~  114 (321)
                      ...++|||.++     |+.  .++|++|||||.  ++.|.||++ .+.            .|.+.|+|.++.+..++ +.
T Consensus         7 ~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~--~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~~d~   84 (124)
T 3pp2_A            7 TLDKAGVLHRTKTADKGKRLRKKHWSASWTVLE--GGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDK   84 (124)
T ss_dssp             --CEEEEEEEEEEEETTEECSSCCCEEEEEEEE--TTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECCGGG
T ss_pred             cEEEEEEEEEEEeccCCccCCCCCceEEEEEEE--CCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEeccccc
Confidence            46799999987     443  258999999999  999999998 432            58899999998766664 55


Q ss_pred             CCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         115 IEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       115 ~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      ..++|.|+|.   ....+.|+|+|+|.+++.+|+.+|+.+.
T Consensus        85 ~krk~vF~l~---t~~~~~ylfqA~s~~e~~~Wi~aI~~aI  122 (124)
T 3pp2_A           85 SSRKNVLELR---SRDGSEYLIQHDSEAIISTWHKAIAQGI  122 (124)
T ss_dssp             CSSSSEEEEE---CTTSCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEE---CCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence            5678888875   2334889999999999999999998763

>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}

Probab=99.58  E-value=1.7e-14  Score=114.71  Aligned_cols=94  Identities=23%  Similarity=0.305  Sum_probs=76.8

Q ss_pred             ceeeEEE-----eecCC--CCCceeeEEEEeccCCeEEeecC-C---------CCCceeEEeccceEEEeccCCCCCCce
Q psy9639          58 HMDGFLM-----KRGKE--SGKYHPRRFVLNEINDTIKYYVK-E---------KKEPKATLRISELNVVIAPSKIEHPHS  120 (321)
Q Consensus        58 ~~~G~L~-----K~g~~--~~~wk~R~fvL~~~~~~L~Yy~~-~---------~~~pkg~I~l~~~~~~~~~~~~~~~~~  120 (321)
                      .++|+|.     |+|+.  .++|++|||||.  ++.|.||+. .         +.+|.|.|+|.+..+. .++...++|+
T Consensus         2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~--g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~-~~e~~~~~~~   78 (126)
T 2dtc_A            2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLS--GATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQ-LPDDPEHPDI   78 (126)
T ss_dssp             CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEE--TTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEE-CCCCTTSTTE
T ss_pred             ceeeeeeeeehhhcCCcccccCcccEEEEEe--CCEEEEEcccccccccccccccCCCceEEeCCCEEE-ecCCCCCCCE
Confidence            3577777     55775  589999999999  999999997 4         6799999999999765 5555568999


Q ss_pred             eEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         121 LQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       121 ~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      |+|.....  +..|.|.|+|.+++.+|+.+|+.+..
T Consensus        79 F~L~~~~~--G~~Y~fqA~s~~~~~~W~~ai~~a~~  112 (126)
T 2dtc_A           79 FQLNNPDK--GNVYKFQTGSRFHAILWHKHLDDACK  112 (126)
T ss_dssp             EEEECTTS--CSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             EEEeeCCC--CCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence            99962223  36799999999999999999998754

>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}

Probab=99.58  E-value=8e-15  Score=115.70  Aligned_cols=95  Identities=16%  Similarity=0.377  Sum_probs=73.8

Q ss_pred             ceeeEEEe--ecCCCC-CceeeEEEEeccCCeEEeecC-C---CCCceeEEeccceEEEe--------ccCCCCCCceeE
Q psy9639          58 HMDGFLMK--RGKESG-KYHPRRFVLNEINDTIKYYVK-E---KKEPKATLRISELNVVI--------APSKIEHPHSLQ  122 (321)
Q Consensus        58 ~~~G~L~K--~g~~~~-~wk~R~fvL~~~~~~L~Yy~~-~---~~~pkg~I~l~~~~~~~--------~~~~~~~~~~~~  122 (321)
                      .++|||.+  +|+..+ +|++|||||.  ++.|.||++ .   ...|.++|+|+.+..+-        +......|+.|+
T Consensus         2 ~~eGwl~~pk~~~~~k~~Wkkr~~vL~--~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~   79 (117)
T 2rov_A            2 RLEGWLSLPVRNNTKKFGWVKKYVIVS--SKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQ   79 (117)
T ss_dssp             CSEEEEECCCCSSSSCCCCCEEEEEEE--TTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEE
T ss_pred             ceEEEEEeecCCCccCCCcEEEEEEEE--CCEEEEEECCCCcccCCceEEEECcccEEEEEcccccccccccccCCcEEE
Confidence            36999985  888778 9999999999  999999998 4   34899999997764321        111222456788


Q ss_pred             EEEeec--CceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         123 LTFMKD--GSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       123 i~~~~~--~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      |++...  .+.|++||.|+|++++.+|+.+|+.+
T Consensus        80 I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~  113 (117)
T 2rov_A           80 ILYANEGISSAKNLLLLANSTEEQQKWVSRLVKK  113 (117)
T ss_dssp             EEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHH
Confidence            876432  23599999999999999999999865

>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A

Probab=99.55  E-value=1.4e-14  Score=137.25  Aligned_cols=97  Identities=12%  Similarity=0.192  Sum_probs=75.0

Q ss_pred             ccceeeEEEeecCC--C-CCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639          56 TGHMDGFLMKRGKE--S-GKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR  132 (321)
Q Consensus        56 ~~~~~G~L~K~g~~--~-~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R  132 (321)
                      ...++|||+|+|+.  . +.|++|||||.  ++.|.||++++..|.|.|+|..+.+...+ ..+.+++|.|...  ...|
T Consensus       277 ~~~k~G~L~K~~~~~~~~~~WkkRwfvL~--~~~L~y~k~~~~~~~~~i~l~~~~v~~~~-~~~r~~~F~i~t~--~~~~  351 (385)
T 2q13_A          277 LTRKAGYLNARNKTGLVSSTWDRQFYFTQ--GGNLMSQARGDVAGGLAMDIDNCSVMAVD-CEDRRYCFQITSF--DGKK  351 (385)
T ss_dssp             CSCCEEEEEEC--------CCEEEEEEEE--TTEEEEECSSCSSCEEEEECTTCEEEEEC-CTTCSSEEEEECT--TSCB
T ss_pred             CccEEEEEEEecCCCCCcCCceeEEEEEE--CCEEEEecCCCcCCCceEEccceEEEecc-ccCCCceEEEEeC--CCCe
Confidence            45899999999976  2 46999999999  99999999966778999999998654333 3467788887521  1228


Q ss_pred             EEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         133 HIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       133 ~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      +|+|+|+|++++.+|+.+|+.+...
T Consensus       352 ~~~l~A~s~~e~~~Wi~ai~~~~~~  376 (385)
T 2q13_A          352 SSILQAESKKDHEEWICTINNISKQ  376 (385)
T ss_dssp             CCCEECSSHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEeCCHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999987543

>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1

Probab=99.53  E-value=8e-14  Score=113.04  Aligned_cols=96  Identities=19%  Similarity=0.348  Sum_probs=79.2

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-C----------------------------------CCCc-----
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-E----------------------------------KKEP-----   97 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~----------------------------------~~~p-----   97 (321)
                      .|+|||.|+++..+.|++|||||.  ++.|.|++. .                                  +.+|     
T Consensus         2 ~k~G~L~~~~~~~~~w~~~~fvL~--~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~l   79 (150)
T 2fjl_A            2 IKNGILYLEDPVNHEWYPHYFVLT--SSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREHL   79 (150)
T ss_dssp             CEEEEEEEEETTTTEEEEEEEEEE--TTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSSS
T ss_pred             CcceEEEeecCCCCCceEeEEEEE--CCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhcc
Confidence            589999999999999999999999  999999882 1                                  1122     


Q ss_pred             ----------eeEEeccceEEEeccC-CCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639          98 ----------KATLRISELNVVIAPS-KIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus        98 ----------kg~I~l~~~~~~~~~~-~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                                +|+|+|.++.+...|. +.+.++.|.|... ..+.++|+|.|+|.+++.+|+.+||.+..
T Consensus        80 ~E~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~-~~~~~~~~laAds~Eem~dW~kaIreaa~  148 (150)
T 2fjl_A           80 DENSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMP-SVAQWSLDVAADSQEELQDWVKKIREVAQ  148 (150)
T ss_dssp             CTTTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECT-TTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred             cccccccccccceEecCccEEEeccCCCCCCceEEEEeCC-CCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence                      8999999998877764 5567788887643 33478999999999999999999998753

>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}

Probab=99.52  E-value=1.9e-14  Score=137.38  Aligned_cols=97  Identities=14%  Similarity=0.150  Sum_probs=77.9

Q ss_pred             ccceeeEEEee---cCCCCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639          56 TGHMDGFLMKR---GKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR  132 (321)
Q Consensus        56 ~~~~~G~L~K~---g~~~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R  132 (321)
                      ...|+|||+|+   |+..+.|+||||||.  ++.|.||+..+..+.+.|+|..+.+...+ ..+.+++|.|..  ....|
T Consensus       300 ~~~k~G~L~k~~~~g~~~~~W~rrwfvl~--~~~l~y~~~~~~~~~~~~~l~~~~v~~~~-~~~r~~cF~i~~--~~~~~  374 (407)
T 4h8s_A          300 LIQKAGYLNLRNKTGLVTTTWERLYFFTQ--GGNLMCQPRGAVAGGLIQDLDNCSVMAVD-CEDRRYCFQITT--PNGKS  374 (407)
T ss_dssp             CSCCEEEEEEEEECSSSCEEEEEEEEEEC--SSCEECCCTTCSSCCCCBCSSCCEEEEEC-CTTCSSEEEEEC--TTSSC
T ss_pred             cceeeceeeeeccCCCCCCCceEEEEEEE--CCEEEEEeCCCCCCCeEEECCceEEEECC-CCCCCceEEEEe--cCCCc
Confidence            45799999998   555678999999999  99999998866778899999988654333 345778888742  22358


Q ss_pred             EEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         133 HIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       133 ~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      +|+|+|+|++++.+|+.+|+.+...
T Consensus       375 ~~~l~A~s~~e~~~Wi~ai~~a~~~  399 (407)
T 4h8s_A          375 GIILQAESRKENEEWICAINNISRQ  399 (407)
T ss_dssp             CEEEECSSSHHHHHHHHHHHHHHSC
T ss_pred             eEEEEcCCHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999987543

>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1.6e-13  Score=109.24  Aligned_cols=98  Identities=17%  Similarity=0.273  Sum_probs=74.2

Q ss_pred             cceeeEEEeecCCC---CCceeeEEEEeccCCeEEeecC-CCC--CceeEEeccceEEEeccCCCCCCceeEEEEeecCc
Q psy9639          57 GHMDGFLMKRGKES---GKYHPRRFVLNEINDTIKYYVK-EKK--EPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGS  130 (321)
Q Consensus        57 ~~~~G~L~K~g~~~---~~wk~R~fvL~~~~~~L~Yy~~-~~~--~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~  130 (321)
                      ..+.+||..+++..   ++||+|||||.  ++.|.||++ ++.  +|.|.|.|.++.++-.+...+..++|.|......+
T Consensus         9 pel~~~l~~~~pkk~tlK~~KrrWFvlk--~~~L~YyK~kee~~~ePig~I~L~gceV~pd~~~~~~kf~ikl~iPs~~g   86 (137)
T 2ys3_A            9 PELKDHLRIFRPRKLTLKGYRQHWVVFK--ETTLSYYKSQDEAPGDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEG   86 (137)
T ss_dssp             CCEECCCEECCTTSCCSSSSCCCEEEEC--SSCEEEESSTTTTTSCCSCCBCTTTCEEEECCBGGGTBEEEEEEEECSSS
T ss_pred             cchhHHHHhhCccccccccceeEEEEEe--CCEEEEECCchhccCCCceEEECCCCEEeccccccCCceEEEEEccCCCC
Confidence            46789999888764   56999999999  999999988 665  99999999999754322112344444432222335


Q ss_pred             eEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         131 TRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       131 ~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      .|.|+|.+||++++.+|+.|++.|..
T Consensus        87 ~r~y~l~cdsEeqy~~WMaA~rlAsk  112 (137)
T 2ys3_A           87 MSEIYLRCQDEQQYARWMAGCRLASK  112 (137)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEECCCHHHHHHHHHHHHHhcc
Confidence            69999999999999999999987643

>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}

Probab=99.49  E-value=4.6e-14  Score=126.89  Aligned_cols=99  Identities=17%  Similarity=0.336  Sum_probs=75.5

Q ss_pred             CCCcceEEEEEEe-----CC------CCCCCcceEEEEEeCCeeEeeeCCCC------CCcceeEEcccccCceEEecCC
Q psy9639         176 TRDFGREGWLWKT-----GP------KNADAYRKRWFTLDYRKLMYHEEPLS------AYPKGEIFLGHCSDGYTVRLGV  238 (321)
Q Consensus       176 ~~~~~k~G~L~K~-----g~------~~~~~WkkRwfvL~~~~L~Yyk~~~~------~~~~g~i~L~~~~~~~~V~~~~  238 (321)
                      ...+.++|||.++     +.      ...+.|++|||||+++.|+||+++..      ..|.+.|.|    .++.|....
T Consensus         8 ~~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L----~ga~v~~a~   83 (279)
T 3a8n_A            8 QGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWV----ENSIVQAVP   83 (279)
T ss_dssp             --CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC--------CCCSSCCBC----CSCEECCCT
T ss_pred             CCceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEecccccccccccCCCceEec----cCcEEEecc
Confidence            4567899999753     11      12379999999999999999998853      357888988    456665322


Q ss_pred             CCCCCCCCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         239 PPGAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       239 ~~~~~~~~~~F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                        +...++|+|.|.++ +++|+|+|+|++||+.||.+|+.++.
T Consensus        84 --d~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~  124 (279)
T 3a8n_A           84 --EHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACA  124 (279)
T ss_dssp             --TSSSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHH
T ss_pred             --ccCCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence              22246799999975 68999999999999999999999874

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.48  E-value=1.8e-14  Score=138.66  Aligned_cols=99  Identities=23%  Similarity=0.322  Sum_probs=73.3

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEe-CCeeEeeeCCCCCCcceeEEcccccC-ceEEecCCCCCCCCCCceEEEEeC
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLD-YRKLMYHEEPLSAYPKGEIFLGHCSD-GYTVRLGVPPGAKDQGFTFTLKTP  254 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~-~~~L~Yyk~~~~~~~~g~i~L~~~~~-~~~V~~~~~~~~~~~~~~F~i~t~  254 (321)
                      ..++|+|||.|+|+.. +.||+|||+|+ ++.|.||+++.+..+.|.|+|...+. .|.+...  .  ..++++|.|.++
T Consensus         4 ~~v~keG~L~K~g~~~-k~Wk~r~fvL~~~~~l~yyk~~~~~~~~~~i~l~~~~~~~~~~~~~--~--~~~~~~f~I~~~   78 (446)
T 4ejn_A            4 VAIVKEGWLHKRGEYI-KTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKT--E--RPRPNTFIIRCL   78 (446)
T ss_dssp             CCEEEEEEEEEEETTT-TEEEEEEEEEETTSBEEEESSCC-------CCCGGGBCTTCEEEEE--C--SSSTTEEEEEEE
T ss_pred             ceEEEEeeEEeecccc-ccccceEEEEeeCCEEEEEecCCCCCccCcccccCccccceeecCC--C--CCCCceeEEEcC
Confidence            3689999999999988 89999999997 89999999999999999999976422 2333221  1  235789999876


Q ss_pred             C-eEE---EEEcCCHHHHHHHHHHHhhccc
Q psy9639         255 Q-RWY---QFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       255 ~-r~~---~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      + +++   .|.++++++++.|+.||+.++.
T Consensus        79 ~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~  108 (446)
T 4ejn_A           79 QWTTVIERTFHVETPEEREEWTTAIQTVAD  108 (446)
T ss_dssp             ETTEEEEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred             CCceeeeeEEecCCHHHHHHHHHHHHhhhh
Confidence            4 343   7899999999999999999874

>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*

Probab=99.45  E-value=2.8e-13  Score=110.43  Aligned_cols=99  Identities=17%  Similarity=0.240  Sum_probs=79.3

Q ss_pred             hCCCcceEEEEEEeCCC--CCCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCCCceEE
Q psy9639         175 LTRDFGREGWLWKTGPK--NADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFT  250 (321)
Q Consensus       175 ~~~~~~k~G~L~K~g~~--~~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~  250 (321)
                      ++.-+...+||..-.++  ..++||+|||++++..|+|||++.+  ..|.|.|+|    .||.|.+.+.  ....+|+|.
T Consensus        43 it~iPeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe~~geP~~~I~L----rGCEVtpDVn--va~~Kf~Ik  116 (173)
T 4f7h_A           43 ITSIPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEESSGTPAHQMNL----RGCEVTPDVN--ISGQKFNIK  116 (173)
T ss_dssp             GGGTTCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGGCSSCCSEEEEC----TTCEEEEEEE--TTTTEEEEE
T ss_pred             hhcChhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhHhcCCCceEEec----CceEEecccc--ccccceeEE
Confidence            45556678999876553  3589999999999999999999877  679999999    7888886432  224567777


Q ss_pred             EEeC----CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         251 LKTP----QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       251 i~t~----~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +.-|    ...++|+++++.++.+||.|+.-|.
T Consensus       117 L~vP~~~gm~e~~Lrcd~E~qya~WMAAcrLAs  149 (173)
T 4f7h_A          117 LLIPVAEGMNEIWLRCDNEKQYAHWMAACRLAS  149 (173)
T ss_dssp             EEEEETTEEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EeccCCCCcceeeeecCCHHHHHHHHHHhhhhc
Confidence            7643    4899999999999999999998876

>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.45  E-value=5e-13  Score=104.24  Aligned_cols=84  Identities=18%  Similarity=0.237  Sum_probs=70.6

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCC---CCCCceEEEE
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGA---KDQGFTFTLK  252 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~---~~~~~~F~i~  252 (321)
                      +..++|+|||.+.+... +.|||+|++|+...|.||+++.+..+...|+|..+   ..|+.+...+.   ...+|||+|.
T Consensus         5 ~s~vlkeGW~VH~t~~d-~~rKRHYWrLD~K~Itlf~~e~~~~~ykeIpL~eI---l~v~~~~~~~~l~~~~~~hcFEi~   80 (125)
T 2coa_A            5 SSGTLREGWVVHYSNKD-TLRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEI---LTVESAQNFSLVPPGTNPHCFEIV   80 (125)
T ss_dssp             CCSCSEEEEEEECCSSS-CCCEEEEEEECSSEEEEESSSSCSSCSEEEETTTC---CEEEESCCCSSSCTTSCCEEEEEE
T ss_pred             CCceeecceEEEEccCC-ccccceeeEecCCeEEEEecCCCCceeeeeehhHe---ecccccccccccCCCCCCceEEEE
Confidence            34789999999999888 79999999999999999999999999999999866   66776542221   1356999999


Q ss_pred             eCCeEEEEEcC
Q psy9639         253 TPQRWYQFSAL  263 (321)
Q Consensus       253 t~~r~~~f~A~  263 (321)
                      |..++|++.++
T Consensus        81 T~~~~yyVg~~   91 (125)
T 2coa_A           81 TANATYFVGEM   91 (125)
T ss_dssp             CSSCCCCEECC
T ss_pred             eCCeEEEEccC
Confidence            99999998764

>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A

Probab=99.45  E-value=2.3e-13  Score=110.20  Aligned_cols=90  Identities=21%  Similarity=0.216  Sum_probs=72.8

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCe
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQR  256 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r  256 (321)
                      ..+++.|+|.|+.+.   .|++|||+|++....||-++.....+|.|+++..   +.|+..       ....|.|+||+|
T Consensus        50 e~Ilk~G~v~KrkGl---~~kkR~liLT~~PrL~Yvdp~~~~~KGeIpls~~---l~ve~k-------~~~~F~I~Tp~R  116 (151)
T 1w1g_A           50 NLILKMGPVDKRKGL---FARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQE---LRPEAK-------NFKTFFVHTPNR  116 (151)
T ss_dssp             CCEEEEEEEEEEETT---EEEEEEEEEETTTEEEEEETTTTEEEEEECCCTT---CEEEES-------SSSEEEEEETTE
T ss_pred             CcEEEEEEEEecccC---cceeEEEEEcCCceEEEEcCccccccceEecCCC---eeEEEc-------CCCEEEEECCCc
Confidence            478999999996443   4999999999988889999988899999999753   445431       123799999999


Q ss_pred             EEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         257 WYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       257 ~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      +|+|.+. ...+++|++||++++.
T Consensus       117 tY~~~d~-~~~AqeWv~aI~~~~~  139 (151)
T 1w1g_A          117 TYYLMDP-SGNAHKWCRKIQEVWR  139 (151)
T ss_dssp             EEEEECT-TSCHHHHHHHHHHHHH
T ss_pred             eEEEEcC-ccCHHHHHHHHHHHHH
Confidence            9998886 7788888888888764

>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}

Probab=99.42  E-value=4.4e-13  Score=119.25  Aligned_cols=99  Identities=14%  Similarity=0.137  Sum_probs=71.6

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCccee---EEcccccCceEEecCCCCC---CCCCCceE
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGE---IFLGHCSDGYTVRLGVPPG---AKDQGFTF  249 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~---i~L~~~~~~~~V~~~~~~~---~~~~~~~F  249 (321)
                      +.....+|||++++... +.|+||||+|+++.|+||+...+..+++.   ++|..    +.|-.+....   ....++||
T Consensus       129 s~~P~~~G~L~~ke~~~-K~WkkRyfvLr~sgLy~~~k~~sk~~r~l~~~~~L~~----~~vy~~~~~kKk~kaPt~~~F  203 (256)
T 3hk0_A          129 SSSPEIQGFLHVKELGK-KSWKKLYVCLRRSGLYCSTKGTSAAPRHLQLLADLED----SNIFSLIAGRKQYNAPTDHGL  203 (256)
T ss_dssp             TSCEEEEEEEEEECTTS-SCEEEEEEEEETTEEEEESSTTCCCGGGEEEEECCTT----EEEEEESSTHHHHCCSSSEEE
T ss_pred             CCCCcceeEEEEecCCC-CcceEEEEEEeCCEEEEEecCCCCccccceEEEEcCC----CEEEEecccccccCCCCCCEE
Confidence            34567899999998776 89999999999999999998887777765   56643    3333322111   11246999


Q ss_pred             EEEeCC------eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         250 TLKTPQ------RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       250 ~i~t~~------r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .|..+.      ..++|+|++++++..||.||+.|.
T Consensus       204 ~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak  239 (256)
T 3hk0_A          204 CIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLK  239 (256)
T ss_dssp             EEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHH
Confidence            999653      368878888777777777777764

>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=4e-12  Score=99.42  Aligned_cols=85  Identities=14%  Similarity=0.202  Sum_probs=69.2

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCC---CCCCCceEEEE
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPG---AKDQGFTFTLK  252 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~---~~~~~~~F~i~  252 (321)
                      +..++|+|||.+.+... ..|||+|++|+...|.+|+++.+..+-..|+|..+   ..|+.+...+   ....+|||+|.
T Consensus         5 ~s~vlkeGWmVH~t~~d-~~rKRHYWrLD~K~Itlf~~e~~~k~ykeIpLseI---L~v~~~~~~~~~~~~~~phcFEi~   80 (129)
T 2d9z_A            5 SSGMVKEGWMVHYTSRD-NLRKRHYWRLDSKCLTLFQNESGSKYYKEIPLSEI---LRISSPRDFTNISQGSNPHCFEII   80 (129)
T ss_dssp             CTTSEEEEEEEEEESSC-CCCEEEEEEEESSCEEEESCSSCCSCCCEECTTTC---CEECCTTCCCCSSSCSCCCSEEEE
T ss_pred             CCceeecceEEEEccCC-ccccceeeEecCCeEEEEecCCCCceeceeeHHHh---cccccccCccccCCCCCCceEEEE
Confidence            34689999999998887 79999999999999999999999999999999865   5566643222   11245999999


Q ss_pred             eCCeEEEEEcCC
Q psy9639         253 TPQRWYQFSALS  264 (321)
Q Consensus       253 t~~r~~~f~A~s  264 (321)
                      |.+.+|++.++.
T Consensus        81 T~~~~y~Vge~~   92 (129)
T 2d9z_A           81 TDTMVYFVGENN   92 (129)
T ss_dssp             CSSCEEEECBCC
T ss_pred             ECCEEEEEccCC
Confidence            999999977643

>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A

Probab=99.38  E-value=7.4e-13  Score=119.18  Aligned_cols=101  Identities=18%  Similarity=0.243  Sum_probs=65.4

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcc---eeEEcccccCceEEecCCCCCCCCCCceEEEEe
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPK---GEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT  253 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~---g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t  253 (321)
                      ..+..+|||++++... +.|+||||+|+++.|+||+...+..++   +.++|... .+|.+....-.-....+|||.|..
T Consensus       156 ~~pe~~G~L~~k~~~~-k~WkkRyfvLr~sgLyy~~K~~sk~~r~l~~l~~L~~~-~VY~~~~~kkk~kaPt~~~F~ik~  233 (281)
T 4gmv_A          156 TVPEIEGVLWLKDDGK-KSWKKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLDHV-NVYYGQDYRNKYKAPTDYCLVLKH  233 (281)
T ss_dssp             CCCCCEEEEEEECTTS-SCEEEEEEEECSSCEEEC---------CCEEEECGGGC-EEEEESSHHHHTCCSCSCEEEEEC
T ss_pred             CCCccEEEEEEECCCC-CCCeEEEEEEeCCEEEEEeCCCCCccccceEEEEcCCc-EEEEecccccccCCCCCcEEEEec
Confidence            3457899999998776 899999999999999999887665564   44567543 335442110000113579999996


Q ss_pred             CC------eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         254 PQ------RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       254 ~~------r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +.      .+++|+|++++++..||.||.-|.
T Consensus       234 ~~~~~~~~~~~~~caede~~~~~Wv~Air~ak  265 (281)
T 4gmv_A          234 PQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAK  265 (281)
T ss_dssp             TTCCSCCTTCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CccCCCCCceEEEEeCCHHHHHHHHHHHHHHh
Confidence            53      578988888888888888887654

>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}

Probab=99.36  E-value=2.8e-12  Score=103.45  Aligned_cols=102  Identities=17%  Similarity=0.211  Sum_probs=74.7

Q ss_pred             hhhhCCCcceEEEEEEeCCC--CCCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCCCc
Q psy9639         172 VKLLTRDFGREGWLWKTGPK--NADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGF  247 (321)
Q Consensus       172 ~~~~~~~~~k~G~L~K~g~~--~~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~  247 (321)
                      ...++..+...|||....++  ..++||+|||++++..|+|||++.+  ..|.+.|+|    .||.|.+.+  +....+|
T Consensus        19 ~~~it~iPeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~~geP~~~inL----rGCEVtPDV--nva~~Kf   92 (165)
T 4bbk_A           19 PEDITDIPKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELEQGEPIEKLNL----RGCEIVPDV--NVSGRKF   92 (165)
T ss_dssp             -------CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGTTSCCSEEEEC----TTCEEEEEE--ETTTTEE
T ss_pred             hhhhccChhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHhcCCCceEEec----CccEEeccc--cccccee
Confidence            33456666778999876553  2489999999999999999999876  569999999    678887643  2224677


Q ss_pred             eEEEEeC----CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         248 TFTLKTP----QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       248 ~F~i~t~----~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +|.|.-|    ...++|+++++.+..+||.|++-|.
T Consensus        93 ~ikL~ip~~~gm~e~~LrcdsE~QYa~WMAAcrLAs  128 (165)
T 4bbk_A           93 GIKLLIPVADGMNEVYLRCDHEDQYARWMAACILAS  128 (165)
T ss_dssp             EEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             eEEEecCCCCcceeeeeecCCHHHHHHHHHHhhhcc
Confidence            8888644    3799999999999999999999876

>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}

Probab=99.35  E-value=5e-12  Score=112.43  Aligned_cols=98  Identities=16%  Similarity=0.235  Sum_probs=74.6

Q ss_pred             cceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeE---EeccceEEEeccC-----CCCCCceeEEEEee
Q psy9639          57 GHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKAT---LRISELNVVIAPS-----KIEHPHSLQLTFMK  127 (321)
Q Consensus        57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~---I~l~~~~~~~~~~-----~~~~~~~~~i~~~~  127 (321)
                      ...+|||++++...+.|++|||+|+  +++|.||++ +++.+++.   +.|++.++-....     +...++||.|.-..
T Consensus       132 P~~~G~L~~ke~~~K~WkkRyfvLr--~sgLy~~~k~~sk~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k  209 (256)
T 3hk0_A          132 PEIQGFLHVKELGKKSWKKLYVCLR--RSGLYCSTKGTSAAPRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNK  209 (256)
T ss_dssp             EEEEEEEEEECTTSSCEEEEEEEEE--TTEEEEESSTTCCCGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETT
T ss_pred             CcceeEEEEecCCCCcceEEEEEEe--CCEEEEEecCCCCccccceEEEEcCCCEEEEecccccccCCCCCCEEEEEccc
Confidence            3689999999988899999999999  999988888 77777775   7888886643321     12235566553211


Q ss_pred             c--CceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         128 D--GSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       128 ~--~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      .  +....+||+|+|++++..|+.+||.++.
T Consensus       210 ~~~~~~~~~~lcaede~~~~~W~~aIr~ak~  240 (256)
T 3hk0_A          210 VRNETKELRLLCAEDEQTRTSWMTAFRLLKY  240 (256)
T ss_dssp             CSSCCTTCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred             ccCCCceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence            1  2234689999999999999999999875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.35  E-value=2.7e-12  Score=123.38  Aligned_cols=99  Identities=17%  Similarity=0.303  Sum_probs=69.9

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEE---eccCCCCCCceeEEEEeecCce
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVV---IAPSKIEHPHSLQLTFMKDGST  131 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~---~~~~~~~~~~~~~i~~~~~~~~  131 (321)
                      +..|+|||+|+|+..++||+|||||.. ++.|.||++ .+..++|.|+|...+.+   ........+++|.|........
T Consensus         5 ~v~keG~L~K~g~~~k~Wk~r~fvL~~-~~~l~yyk~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~~~~~~~~   83 (446)
T 4ejn_A            5 AIVKEGWLHKRGEYIKTWRPRYFLLKN-DGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTV   83 (446)
T ss_dssp             CEEEEEEEEEEETTTTEEEEEEEEEET-TSBEEEESSCC-------CCCGGGBCTTCEEEEECSSSTTEEEEEEEETTEE
T ss_pred             eEEEEeeEEeeccccccccceEEEEee-CCEEEEEecCCCCCccCcccccCccccceeecCCCCCCCceeEEEcCCCcee
Confidence            468999999999999999999999963 899999999 88999999999986421   1111234578888853333222


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      ..-.+.+++++++.+|+.+|+.+.
T Consensus        84 ~~r~~~~~~~ee~e~W~~ai~~~i  107 (446)
T 4ejn_A           84 IERTFHVETPEEREEWTTAIQTVA  107 (446)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHC
T ss_pred             eeeEEecCCHHHHHHHHHHHHhhh
Confidence            223688999999999999998873

>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A

Probab=99.29  E-value=1.1e-11  Score=111.53  Aligned_cols=99  Identities=22%  Similarity=0.359  Sum_probs=69.4

Q ss_pred             cceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCce---eEEeccceEEEeccC-----CCCCCceeEEEEee
Q psy9639          57 GHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPK---ATLRISELNVVIAPS-----KIEHPHSLQLTFMK  127 (321)
Q Consensus        57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pk---g~I~l~~~~~~~~~~-----~~~~~~~~~i~~~~  127 (321)
                      ...+|||++++...+.|+||||||+  ++.|.||.+ .+++|+   +.+.|+++++-....     +...++||.|....
T Consensus       158 pe~~G~L~~k~~~~k~WkkRyfvLr--~sgLyy~~K~~sk~~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~  235 (281)
T 4gmv_A          158 PEIEGVLWLKDDGKKSWKKRYFLLR--ASGIYYVPKGKAKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQ  235 (281)
T ss_dssp             CCCEEEEEEECTTSSCEEEEEEEEC--SSCEEEC---------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTT
T ss_pred             CccEEEEEEECCCCCCCeEEEEEEe--CCEEEEEeCCCCCccccceEEEEcCCcEEEEecccccccCCCCCcEEEEecCc
Confidence            4689999999988899999999999  899998988 666664   556888875533211     22346677664322


Q ss_pred             c--CceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         128 D--GSTRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       128 ~--~~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      .  ++...+||+|+|++++..|+.+||.++..
T Consensus       236 ~~~~~~~~~~~caede~~~~~Wv~Air~ak~g  267 (281)
T 4gmv_A          236 IQKKSQYIKYLCCDDVRTLHQWVNGIRIAKYG  267 (281)
T ss_dssp             CCSCCTTCEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCCceEEEEeCCHHHHHHHHHHHHHHhhC
Confidence            1  34567899999999999999999998763

>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}

Probab=99.28  E-value=8.7e-12  Score=112.09  Aligned_cols=96  Identities=19%  Similarity=0.221  Sum_probs=76.9

Q ss_pred             ccceeeEEEee-----cC-------CCCCceeeEEEEeccCCeEEeecC-CC------CCceeEEeccceEEEeccCCCC
Q psy9639          56 TGHMDGFLMKR-----GK-------ESGKYHPRRFVLNEINDTIKYYVK-EK------KEPKATLRISELNVVIAPSKIE  116 (321)
Q Consensus        56 ~~~~~G~L~K~-----g~-------~~~~wk~R~fvL~~~~~~L~Yy~~-~~------~~pkg~I~l~~~~~~~~~~~~~  116 (321)
                      ...++|||.++     |+       ..+.|++|||||.  ++.|.||++ ..      ..|.+.|.|.++.+..+++...
T Consensus        10 ~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLk--g~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a~d~~k   87 (279)
T 3a8n_A           10 TVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLK--GCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVPEHPK   87 (279)
T ss_dssp             CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEE--TTEECCBCCC--------CCCSSCCBCCSCEECCCTTSSS
T ss_pred             ceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEe--CCEEEEEecccccccccccCCCceEeccCcEEEeccccCC
Confidence            35799999653     32       2578999999999  999999998 42      4688999999997765666666


Q ss_pred             CCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         117 HPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       117 ~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      ++|.|.|..   ...+.|+|.|+|.++|.+|+.+|+.+..
T Consensus        88 Kk~vF~L~t---~~g~~yLFQA~s~eEm~~WI~aI~~a~~  124 (279)
T 3a8n_A           88 KDFVFCLSN---SLGDAFLFQTTSQTELENWITAIHSACA  124 (279)
T ss_dssp             SCSCCCEEE---TTTEEEECCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEc---CCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence            788998863   2448899999999999999999987754

>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*

Probab=99.23  E-value=1.2e-10  Score=95.05  Aligned_cols=97  Identities=12%  Similarity=0.213  Sum_probs=74.5

Q ss_pred             ceeeEEEeecCC---CCCceeeEEEEeccCCeEEeecC-CC--CCceeEEeccceEEEeccCCCCCCceeEEEEeecCce
Q psy9639          58 HMDGFLMKRGKE---SGKYHPRRFVLNEINDTIKYYVK-EK--KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGST  131 (321)
Q Consensus        58 ~~~G~L~K~g~~---~~~wk~R~fvL~~~~~~L~Yy~~-~~--~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~  131 (321)
                      ...+||....+.   .++||+||||++  |+.|.||++ ++  .+|.+.|.|.++.++.......+.+++.+......+.
T Consensus        48 eL~dyLk~~~pk~~tLKgyKryWFv~k--d~~LsyYKskEe~~geP~~~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~gm  125 (173)
T 4f7h_A           48 ELADYIKVFKPKKLTLKGYKQYWCTFK--DTSISCYKSKEESSGTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGM  125 (173)
T ss_dssp             CEEEEEEEECCBTTBCCCCEEEEEEEE--TTEEEEESCGGGCSSCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEE
T ss_pred             hhHhHHHhhcchhcccccceeEEEEEe--CCEEEEEcCHhHhcCCCceEEecCceEEeccccccccceeEEEeccCCCCc
Confidence            567999875543   589999999999  999999999 55  7999999999997654322223444555433334456


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      +.+++.+++++++.+|+.|.|-+..
T Consensus       126 ~e~~Lrcd~E~qya~WMAAcrLAsk  150 (173)
T 4f7h_A          126 NEIWLRCDNEKQYAHWMAACRLASK  150 (173)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred             ceeeeecCCHHHHHHHHHHhhhhcc
Confidence            8899999999999999999987644

>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=1.8e-10  Score=90.02  Aligned_cols=99  Identities=17%  Similarity=0.193  Sum_probs=71.0

Q ss_pred             ccceeeEEEeec--CCCCCceeeEEEEecc----CCeEEeecC-CC----CCceeEEeccceEEEeccC-CCCCCceeEE
Q psy9639          56 TGHMDGFLMKRG--KESGKYHPRRFVLNEI----NDTIKYYVK-EK----KEPKATLRISELNVVIAPS-KIEHPHSLQL  123 (321)
Q Consensus        56 ~~~~~G~L~K~g--~~~~~wk~R~fvL~~~----~~~L~Yy~~-~~----~~pkg~I~l~~~~~~~~~~-~~~~~~~~~i  123 (321)
                      ...|+|||.++.  +-.+.|+||||||...    -.-|.||.. ++    ..|+.+|.|+++..+.... ..+.|... .
T Consensus        11 ~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~pk~~-~   89 (127)
T 2d9w_A           11 GAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRDT-S   89 (127)
T ss_dssp             CSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSCSSC-E
T ss_pred             ccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCccCCCCcc-e
Confidence            357999999987  4556799999999742    234889998 44    2789999999995543211 21222221 3


Q ss_pred             EEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         124 TFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       124 ~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      .|..+++.|+|.|+|+++ ++.+|+.+|....+
T Consensus        90 aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~aF  121 (127)
T 2d9w_A           90 AFFLETKERLYLLAAPAA-ERGDWVQAICLLAF  121 (127)
T ss_dssp             EEEEEESSCEEEEEECHH-HHHHHHHHHHHHHT
T ss_pred             EEEEEeCCcEEEEEeCcH-HHHHHHHHHHHHhc
Confidence            355667789999999965 89999999986544

>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}

Probab=99.18  E-value=2.9e-10  Score=91.71  Aligned_cols=97  Identities=15%  Similarity=0.242  Sum_probs=73.3

Q ss_pred             ceeeEEEeecCC---CCCceeeEEEEeccCCeEEeecC-CC--CCceeEEeccceEEEeccCCCCCCceeEEEEeecCce
Q psy9639          58 HMDGFLMKRGKE---SGKYHPRRFVLNEINDTIKYYVK-EK--KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGST  131 (321)
Q Consensus        58 ~~~G~L~K~g~~---~~~wk~R~fvL~~~~~~L~Yy~~-~~--~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~  131 (321)
                      ...+||...+..   .++||+||||+.  |..|.||++ ++  .+|.+.|.|.++.++......++.+++.+......+.
T Consensus        27 eL~dyLk~~~pkrltLKgfKryWfv~k--Dt~LsyYKSkEe~~geP~~~inLrGCEVtPDVnva~~Kf~ikL~ip~~~gm  104 (165)
T 4bbk_A           27 KLADYLKLFRPKKLMLKACKQYWFVFK--DTSIAYFKNKELEQGEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVADGM  104 (165)
T ss_dssp             CEEEEEEEEC-------CCEEEEEEEE--TTEEEEESSGGGTTSCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEE
T ss_pred             hhHhHHHhhcccccccccceeEEEEEe--CCEEEEEcCHHHhcCCCceEEecCccEEecccccccceeeEEEecCCCCcc
Confidence            567999875543   489999999999  999999999 54  7899999999997653322335566777643334456


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      ..+++.++++++..+|+.|.|-+..
T Consensus       105 ~e~~LrcdsE~QYa~WMAAcrLAsk  129 (165)
T 4bbk_A          105 NEVYLRCDHEDQYARWMAACILASK  129 (165)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred             eeeeeecCCHHHHHHHHHHhhhccc
Confidence            7789999999999999999987644

>2iqj_A Stromal membrane-associated protein 1-like; zinc, structural genomics, structural genomics consortium, SGC, protein transport; 1.90A {Homo sapiens}

Probab=99.17  E-value=5.6e-12  Score=100.88  Aligned_cols=47  Identities=26%  Similarity=0.583  Sum_probs=41.9

Q ss_pred             CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639           1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE   50 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~   50 (321)
                      |..+||..||++||+++|..+++|++++   .+|+|||+||++++|+.+.
T Consensus        83 m~~~GN~~an~~~e~~lp~~~~~P~~~~---~~e~fIr~KY~~k~f~~~~  129 (134)
T 2iqj_A           83 MQEMGNGKANRLYEAYLPETFRRPQIDP---AVEGFIRDKYEKKKYMDRS  129 (134)
T ss_dssp             HHTCHHHHHHHHHTTTCCSSCCCCCSHH---HHHHHHHHHHTSCTTCCTT
T ss_pred             HHHHchHHHHHHHHhcCCccCCCCCchH---HHHHHHHHHHhCCeeeCCc
Confidence            5678999999999999999999998653   6799999999999999764

>2crr_A Stromal membrane-associated protein SMAP1B; arfgap domain, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.15  E-value=1.1e-11  Score=99.98  Aligned_cols=47  Identities=28%  Similarity=0.665  Sum_probs=42.2

Q ss_pred             CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639           1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE   50 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~   50 (321)
                      |..+||..||++||+++|..+++|+++   ..+|+|||+||++++|+.+.
T Consensus        85 m~~~GN~~an~~~e~~lp~~~~~P~~~---~~~e~fIr~KY~~k~f~~~~  131 (141)
T 2crr_A           85 MQDMGNTKARLLYEANLPENFRRPQTD---QAVEFFIRDKYEKKKYYDKN  131 (141)
T ss_dssp             HHHTHHHHHHHHGGGSCCTTCCCCCSH---HHHHHHHHHHHTSCTTCCCG
T ss_pred             HHHHccHHHHHHHHhcCCcccCCCCch---HHHHHHHHHHHhcCcccCCC
Confidence            567899999999999999999999875   36799999999999999865

>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=98.99  E-value=2.7e-09  Score=83.22  Aligned_cols=95  Identities=15%  Similarity=0.248  Sum_probs=75.2

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC------CCCCCceeEEEEeec
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS------KIEHPHSLQLTFMKD  128 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~------~~~~~~~~~i~~~~~  128 (321)
                      ...++||+.+.+.....|||+|++|.  ..+|.||.+ .+.++-..|+|.++..+-...      ....+|+|.|    -
T Consensus         7 ~vlkeGW~VH~t~~d~~rKRHYWrLD--~K~Itlf~~e~~~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi----~   80 (125)
T 2coa_A            7 GTLREGWVVHYSNKDTLRKRHYWRLD--CKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEI----V   80 (125)
T ss_dssp             SCSEEEEEEECCSSSCCCEEEEEEEC--SSEEEEESSSSCSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEE----E
T ss_pred             ceeecceEEEEccCCccccceeeEec--CCeEEEEecCCCCceeeeeehhHeecccccccccccCCCCCCceEEE----E
Confidence            46899999999999999999999998  999999999 888898999999986543211      1124566554    4


Q ss_pred             CceEEEEEEeC--------C---hHHHHHHHHHHHhhhh
Q psy9639         129 GSTRHIYVYHE--------E---SQSIMNWYHAIRNAKF  156 (321)
Q Consensus       129 ~~~R~~~l~a~--------s---~~e~~~W~~aLr~a~~  156 (321)
                      +.+++||+.++        +   .+.+..|..+|++|-.
T Consensus        81 T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqALm  119 (125)
T 2coa_A           81 TANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALM  119 (125)
T ss_dssp             CSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHGG
T ss_pred             eCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhcc
Confidence            56789999874        1   2568999999998754

>2olm_A Nucleoporin-like protein RIP; arfgap, GTPase-activating protein, REV-interacting protein, human immunodeficiency virus, AIDS, structural genomics; 1.48A {Homo sapiens} PDB: 2d9l_A

Probab=98.98  E-value=1.8e-10  Score=92.81  Aligned_cols=49  Identities=29%  Similarity=0.461  Sum_probs=41.8

Q ss_pred             CccccchHHHHhhhccCCC-CCCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639           1 MKQIGNNVSKLKYEMRVPA-SYKVPTSSCPQVLLKEWIRSKYEREEFRHPE   50 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~-~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~   50 (321)
                      |..+||..||++||+++|+ .+.+|++.++. .++.|||+|||+++|+.+.
T Consensus        80 m~~~GN~~an~~~e~~~~~~~~~~P~~~d~~-~~~~fIr~KYe~k~f~~~~  129 (140)
T 2olm_A           80 LQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQ-KVKEFLQEKYEKKRWYVPP  129 (140)
T ss_dssp             HHHCHHHHHHHHHTTTCCTTTSCCCCTTCHH-HHHHHHHHHHTSCTTCCCH
T ss_pred             HHHhccHHHHHHHHhhCCcccCCCCCCCCHH-HHHHHHHHHHcCCeeeCCc
Confidence            5678999999999999986 57788877775 5566999999999999875

>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=2e-08  Score=78.57  Aligned_cols=96  Identities=15%  Similarity=0.267  Sum_probs=76.0

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC------CCCCCceeEEEEeec
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS------KIEHPHSLQLTFMKD  128 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~------~~~~~~~~~i~~~~~  128 (321)
                      ...++||+.+.+.....|||+|++|.  ..+|.+|.+ .+..+-..|+|+++..+-...      ....+|+|.|.    
T Consensus         7 ~vlkeGWmVH~t~~d~~rKRHYWrLD--~K~Itlf~~e~~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~----   80 (129)
T 2d9z_A            7 GMVKEGWMVHYTSRDNLRKRHYWRLD--SKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEII----   80 (129)
T ss_dssp             TSEEEEEEEEEESSCCCCEEEEEEEE--SSCEEEESCSSCCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEE----
T ss_pred             ceeecceEEEEccCCccccceeeEec--CCeEEEEecCCCCceeceeeHHHhcccccccCccccCCCCCCceEEEE----
Confidence            46789999999999999999999999  999999999 778888889999995542211      11245787663    


Q ss_pred             CceEEEEEEeCC---------------hHHHHHHHHHHHhhhhh
Q psy9639         129 GSTRHIYVYHEE---------------SQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       129 ~~~R~~~l~a~s---------------~~e~~~W~~aLr~a~~~  157 (321)
                      +.+++||+.++.               .+.+..|..+||+|-..
T Consensus        81 T~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALmP  124 (129)
T 2d9z_A           81 TDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMS  124 (129)
T ss_dssp             CSSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHHH
T ss_pred             ECCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhccC
Confidence            567889988743               57899999999988543

>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=98.89  E-value=8.9e-09  Score=80.66  Aligned_cols=101  Identities=23%  Similarity=0.317  Sum_probs=79.1

Q ss_pred             CCcceEEEEEEeCC-------CCCCCcceEEEEEeC------CeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCC
Q psy9639         177 RDFGREGWLWKTGP-------KNADAYRKRWFTLDY------RKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAK  243 (321)
Q Consensus       177 ~~~~k~G~L~K~g~-------~~~~~WkkRwfvL~~------~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~  243 (321)
                      -.++++|.|.-..+       .....|+|++++|+.      -.|.||..++..+|+..|++..|.+   |+.+.+....
T Consensus        16 ~e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPkssKpK~~i~cs~I~E---VR~tt~LEmP   92 (136)
T 1v5m_A           16 VDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAIIE---VRTTMPLEMP   92 (136)
T ss_dssp             CSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTTSSSCSSCEETTTCCB---CCCCCCSSSC
T ss_pred             ceeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCcccCCccccchhhhhh---hhhccccccC
Confidence            36789999964322       123589999999972      4577999999999999999988755   5666655555


Q ss_pred             CCCceEEEEeCCe-EEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         244 DQGFTFTLKTPQR-WYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       244 ~~~~~F~i~t~~r-~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      ++.|.|.|.+.++ .|+|.|.++.+|++|+..|+.|+.
T Consensus        93 D~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~  130 (136)
T 1v5m_A           93 EKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVD  130 (136)
T ss_dssp             CCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcC
Confidence            6789999998765 899999999999999988888764

>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A

Probab=98.88  E-value=6.1e-09  Score=84.32  Aligned_cols=90  Identities=21%  Similarity=0.183  Sum_probs=68.0

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHI  134 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~  134 (321)
                      ...+.|+|+|+.+  -.|++|||+|.  ++...||.+ .....||.|+++....+-.   .+ +..    |.+.++.|+|
T Consensus        51 ~Ilk~G~v~KrkG--l~~kkR~liLT--~~PrL~Yvdp~~~~~KGeIpls~~l~ve~---k~-~~~----F~I~Tp~RtY  118 (151)
T 1w1g_A           51 LILKMGPVDKRKG--LFARRRQLLLT--EGPHLYYVDPVNKVLKGEIPWSQELRPEA---KN-FKT----FFVHTPNRTY  118 (151)
T ss_dssp             CEEEEEEEEEEET--TEEEEEEEEEE--TTTEEEEEETTTTEEEEEECCCTTCEEEE---SS-SSE----EEEEETTEEE
T ss_pred             cEEEEEEEEeccc--CcceeEEEEEc--CCceEEEEcCccccccceEecCCCeeEEE---cC-CCE----EEEECCCceE
Confidence            3578999999554  34999999999  888889998 8899999999997532211   11 223    3444556999


Q ss_pred             EEEeCChHHHHHHHHHHHhhhhhh
Q psy9639         135 YVYHEESQSIMNWYHAIRNAKFHR  158 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a~~~~  158 (321)
                      +|.+. .....+|+++|..+...+
T Consensus       119 ~~~d~-~~~AqeWv~aI~~~~~~~  141 (151)
T 1w1g_A          119 YLMDP-SGNAHKWCRKIQEVWRQR  141 (151)
T ss_dssp             EEECT-TSCHHHHHHHHHHHHHHH
T ss_pred             EEEcC-ccCHHHHHHHHHHHHHHH
Confidence            99886 778899999998776543

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=98.79  E-value=2.1e-09  Score=100.95  Aligned_cols=49  Identities=35%  Similarity=0.598  Sum_probs=45.5

Q ss_pred             CccccchHHHHhhhccCCC-CCCCCCCCCChHHHHHHHHHhhhhcccccC
Q psy9639           1 MKQIGNNVSKLKYEMRVPA-SYKVPTSSCPQVLLKEWIRSKYEREEFRHP   49 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~-~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~   49 (321)
                      |..+||..+|++||+++|. ..+||+++++...||+|||+||++++|+.+
T Consensus       101 ~~~~gn~~~n~~~e~~~~~~~~~kp~~~~~~~~re~fIr~KY~~k~f~~~  150 (368)
T 3jue_A          101 MCELGNVIINQIYEARVEAMAVKKPGPSCSRQEKEAWIHAKYVEKKFLTK  150 (368)
T ss_dssp             HHHSCHHHHHHHHTTTTTTTTCCCCCTTSCHHHHHHHHHHHHTSCTTCCS
T ss_pred             HHHHccHHHHHHHHhhcccccCcCCCCCCCHHHHHHHHHHHHHhhccccc
Confidence            5678999999999999997 568999999999999999999999999875

>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*

Probab=98.53  E-value=8.9e-07  Score=68.87  Aligned_cols=99  Identities=12%  Similarity=-0.045  Sum_probs=68.1

Q ss_pred             hCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC----CcceeEEcccccCceEEecCCCCCCCCCCceEE
Q psy9639         175 LTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA----YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFT  250 (321)
Q Consensus       175 ~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~----~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~  250 (321)
                      ..+.++++|-|.+......+.=++++|.|-++.|.|-.-....    .....++|..    ..|....  +....+++|.
T Consensus         4 pgR~lv~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~~~~~~~~~~~L~~----~~v~d~~--d~~~~~n~f~   77 (113)
T 1zc3_B            4 PGQYLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDR----LAVVNVK--DNPPMKDMFK   77 (113)
T ss_dssp             -CCCEEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTT----CEEEEEC--CBTTBSSEEE
T ss_pred             CCeEEEEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCcccEEEEEEEEccc----CEEEECC--CCcccceEEE
Confidence            3567899999998875442344568899998888886643221    2344567743    3444322  2224578999


Q ss_pred             EEeCCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         251 LKTPQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       251 i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      |.++.++|.|+|+|++|+.+|+.+|++|+
T Consensus        78 i~~~~~s~~~~aes~~eK~~Wl~~~~~a~  106 (113)
T 1zc3_B           78 LLMFPESRIFQAENAKIKREWLEVLEETK  106 (113)
T ss_dssp             EEETTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             EEeCCceEEEEcCCHHHHHHHHHHHHHHH
Confidence            99999999988888888888888877766

>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=98.47  E-value=7.5e-07  Score=70.99  Aligned_cols=96  Identities=11%  Similarity=0.101  Sum_probs=63.7

Q ss_pred             CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCC---CCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC
Q psy9639         178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPL---SAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP  254 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~---~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~  254 (321)
                      +++..|-+..+.... +.-+.|||+|-++.|.|.+...   .-.-+|.+||.    +..|...  .+..+.+|+|+|..+
T Consensus        27 ~ii~~s~v~~~~~~~-~~~~eR~l~LF~~~Ll~~s~~~~~~~f~~kgklPL~----g~~V~~~--ed~~~~~~aFeI~g~   99 (132)
T 1v61_A           27 NVIFMSQVVMQHGAC-EEKEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIA----GMVVNRL--DEIEGSDCMFEITGS   99 (132)
T ss_dssp             CCSCEEEEEBCCSSS-SCCCEEEEEECSSCEEEEECSSSSSCCEEEEEECTT----TCBCSTT--CSSSSSCCCEEEECS
T ss_pred             CeEEEeeEEEEEccc-CcceEEEEEEcCCeEEEEEecCCCceEEEEEEEecc----eeEEEec--cccccCccEEEEecC
Confidence            334444444443333 4567899999999998887543   23457999995    4555542  233456899999977


Q ss_pred             C-eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         255 Q-RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       255 ~-r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      . +++.|.|.|.+|+++||.+|+.+|.
T Consensus       100 ~~~~i~v~~~s~eE~~~Wl~~L~~~i~  126 (132)
T 1v61_A          100 TVERIVVHCNNNQDFQEWMEQLNRLTK  126 (132)
T ss_dssp             SSCEEEECCCCSHHHHHHHHHHHHHHT
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence            5 8899777776666666666666653

>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}

Probab=98.22  E-value=1.7e-05  Score=63.47  Aligned_cols=98  Identities=14%  Similarity=0.042  Sum_probs=70.4

Q ss_pred             hCCCcceEEEEEEeC---CCCCCCcceEEEEEeCCeeEeeeCC------CCCCcceeEEcccccCceEEecCCCCCCCCC
Q psy9639         175 LTRDFGREGWLWKTG---PKNADAYRKRWFTLDYRKLMYHEEP------LSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQ  245 (321)
Q Consensus       175 ~~~~~~k~G~L~K~g---~~~~~~WkkRwfvL~~~~L~Yyk~~------~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~  245 (321)
                      ..+..++.+-|.---   ....++-+.|+|.|-++.|.|-|.-      .....++.++|    .|..|+.....   ..
T Consensus         9 phRrlvc~~~l~ev~d~~K~~~kg~qqR~~FLFND~LL~TK~~~kkk~~~~Y~vr~~~~L----~gm~V~~~e~e---~~   81 (140)
T 3qwm_A            9 PHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSL----YGMQVLLFENQ---YY   81 (140)
T ss_dssp             -CCCEEEEEEEEECSCTTSCCCTTTTEEEEEEESSCEEEEECCC---CCCCCCCEEEECC----TTEEEEEECCS---SC
T ss_pred             CCceEEEEEeeeeeccCcccccccccceEEEEecchhhheeecccCCCCCceEEEEEeee----cceEEEcccCC---CC
Confidence            345678888884321   1112456899999999999988511      22345778887    56777765422   37


Q ss_pred             CceEEEEeCC------eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         246 GFTFTLKTPQ------RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       246 ~~~F~i~t~~------r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +|+|.|..+.      +++.|+|+|.+|+.+||.+|+.+|
T Consensus        82 p~~~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI  121 (140)
T 3qwm_A           82 PNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESI  121 (140)
T ss_dssp             TTEEEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHH
Confidence            8999999752      789999999999999999999988

>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}

Probab=98.16  E-value=7.9e-06  Score=69.92  Aligned_cols=97  Identities=10%  Similarity=0.118  Sum_probs=72.1

Q ss_pred             hCCCcceEEEEEEeCCCCCCCcceEEEEEeC------C-eeEeeeCCCC----CCcceeEEcccccCceEEecCCCCCCC
Q psy9639         175 LTRDFGREGWLWKTGPKNADAYRKRWFTLDY------R-KLMYHEEPLS----AYPKGEIFLGHCSDGYTVRLGVPPGAK  243 (321)
Q Consensus       175 ~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~------~-~L~Yyk~~~~----~~~~g~i~L~~~~~~~~V~~~~~~~~~  243 (321)
                      .++.++.+|+...+.+   |.||.||+||+.      - .|..|++..+    ..++.+|.|.++   +-++...  ...
T Consensus         5 ~~~~~v~eg~vk~r~~---KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~~~KaslsL~~~---~GlE~g~--~ld   76 (224)
T 3ml4_A            5 MTEAALVEGQVKLRDG---KKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGLRERSSLTLEDI---CGLEPAL--PYE   76 (224)
T ss_dssp             --CCCSEEEEEEEC------CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCCCCSEEEEECCE---EEEEEEE--EET
T ss_pred             cccceeEEEeeeeecC---CceeeEEEEEEcCCCchheEEEEEEcChhhhhcCCcccceeehHHh---cCccccc--ccc
Confidence            4567788999987764   579999999982      2 5778988755    567889999765   3344322  112


Q ss_pred             CCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         244 DQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       244 ~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ...+.+.|++.+.+..|..+|.+++..|...|+...
T Consensus        77 k~s~TlAIIc~d~~~vLAFds~e~l~~W~~~l~~sl  112 (224)
T 3ml4_A           77 GLAHTLAIICLSQAVMLGFDSHEAMCAWDTRIRYAL  112 (224)
T ss_dssp             TEEEEEEEEESSCEEEEECSSHHHHHHHHHHHHHHT
T ss_pred             CcccEEEEEecCcEEEEEeCCHHHHHHHHHHHhhcc
Confidence            456899999999999999999999999999999754

>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}

Probab=98.03  E-value=2.3e-05  Score=74.79  Aligned_cols=96  Identities=22%  Similarity=0.299  Sum_probs=70.1

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT  253 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t  253 (321)
                      .+.++++|.|.+.++   +.++.|||.|-++.|.|-+...+  ...++.|+|..    +.|....   ....++.|.|.+
T Consensus       241 ~r~li~~g~l~~~~~---~~~~~r~~fLF~d~Ll~~k~~~~~~y~~k~~i~L~~----l~v~~~~---~~~~~~~f~i~~  310 (434)
T 3mpx_A          241 GREFLKEGTLMKVTG---KNRRPRHLFLMNDVLLYTYPQKDGKYRLKNTLAVAN----MKVSRPV---MEKVPYALKIET  310 (434)
T ss_dssp             TCCEEECCEEEEEET---TEEEEEEEEEESSEEEEEEECTTSCEEEEEEEEC---------CCCC---CTTSCSEEEEEC
T ss_pred             CcceEecceEEEEeC---CCceEEEEEEECCEEEEEEecCCCeEEEEEEEEcCC----cEEEecC---CCCCCeeEEEec
Confidence            346789999988754   35789999999999999885433  22467888854    3343211   124579999999


Q ss_pred             CCeEEEEEcCCHHHHHHHHHHHhhcccc
Q psy9639         254 PQRWYQFSALSAPDRDQWIQAVQTGFTF  281 (321)
Q Consensus       254 ~~r~~~f~A~s~~e~~~Wv~aL~~ai~~  281 (321)
                      ++++|.|+|.|+++++.|+++|+++|..
T Consensus       311 ~~~~~~l~a~s~~ek~~W~~~i~~ai~e  338 (434)
T 3mpx_A          311 SESCLMLSASSCAERDEWYGCLSRALPE  338 (434)
T ss_dssp             SSCEEEEECSSHHHHHHHHHHHHHC---
T ss_pred             CCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999964

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=97.98  E-value=3.8e-06  Score=75.42  Aligned_cols=50  Identities=22%  Similarity=0.340  Sum_probs=45.0

Q ss_pred             CccccchHHHHhhhccCCCCCC-CCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639           1 MKQIGNNVSKLKYEMRVPASYK-VPTSSCPQVLLKEWIRSKYEREEFRHPE   50 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~~~~-~p~~~~~~~~~e~~ir~ky~~~~f~~~~   50 (321)
                      |..+||..+|++||+++|.... +|++.++...+++||++||+.++|..+.
T Consensus        73 ~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~  123 (278)
T 1dcq_A           73 AKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKK  123 (278)
T ss_dssp             HHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCC
T ss_pred             HHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhccccc
Confidence            4567999999999999998654 9999999999999999999999998764

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=97.94  E-value=4.9e-06  Score=75.60  Aligned_cols=50  Identities=18%  Similarity=0.270  Sum_probs=45.4

Q ss_pred             CccccchHHHHhhhccCCCC-CCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639           1 MKQIGNNVSKLKYEMRVPAS-YKVPTSSCPQVLLKEWIRSKYEREEFRHPE   50 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~~-~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~   50 (321)
                      |...||..+|++||+.+|.. +.+|++.+....+++||++||+.+.|..+.
T Consensus        98 ~~~~GN~~~n~i~E~~l~~~~~~kP~~~s~~~~r~~~I~~Ky~~~~f~~~~  148 (301)
T 2b0o_E           98 ALNMGNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRC  148 (301)
T ss_dssp             HHHCCHHHHHHHHTTTCCSSSCSCCCTTCCHHHHHHHHHHHHTSCTTSCCC
T ss_pred             HHHcCCHHHHHHHHHhhhhccCCCCCCcccHHHHHHHHHHHHHhhhhhccc
Confidence            45789999999999999985 899999999999999999999999997753

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*

Probab=97.92  E-value=7.6e-06  Score=79.47  Aligned_cols=50  Identities=18%  Similarity=0.274  Sum_probs=45.6

Q ss_pred             CccccchHHHHhhhccCCC-CCCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639           1 MKQIGNNVSKLKYEMRVPA-SYKVPTSSCPQVLLKEWIRSKYEREEFRHPE   50 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~-~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~   50 (321)
                      |..+||..+|++||+.+|. ...+|.+.++...+++||++||+.+.|..+.
T Consensus        79 ~~~~GN~~an~i~E~~lp~~~~~kP~~~s~~~~re~fIraky~~~~f~~~~  129 (497)
T 3lvq_E           79 ALNMGNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRC  129 (497)
T ss_dssp             TTTCCHHHHHHHHTTTCCSSSCSCCCTTCCHHHHHHHHHHHHTTCTTSCCC
T ss_pred             HHHHhhHHHHHHHHhhcccccCCCCCCcCcHHHHHHHHHHHhhcccccccc
Confidence            6788999999999999997 4589999999999999999999999998754

>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}

Probab=97.88  E-value=8e-05  Score=62.86  Aligned_cols=95  Identities=19%  Similarity=0.221  Sum_probs=62.6

Q ss_pred             hCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCC-------cceeEEcccccCceEEecCCCCCCCCCCc
Q psy9639         175 LTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAY-------PKGEIFLGHCSDGYTVRLGVPPGAKDQGF  247 (321)
Q Consensus       175 ~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~-------~~g~i~L~~~~~~~~V~~~~~~~~~~~~~  247 (321)
                      ..+.++++|-|..+...+  .++.||++|-++.|.|-....+..       ....|.|.    .+.|++.. .   +. .
T Consensus        67 ~~R~Ll~eG~L~~k~~~~--~~~d~~~fLf~D~Ll~~~~~~~ky~~~~~~~~~pvi~L~----~~~vre~a-~---d~-~  135 (185)
T 2lg1_A           67 KRKKLVRDGSVFLKNAAG--RLKEVQAVLLTDILVFLQEKDQKYIFASLDQKSTVISLK----KLIVREVA-H---EE-K  135 (185)
T ss_dssp             TTSCEEEEEEEEEECTTC--CEEEEEEEEESSEEECCEEETTEEECCCCSSSCSEEESS----SCEEECCS-S---CS-S
T ss_pred             CCCceeeeceEEEeccCC--CeeeEEEEeecCEEEEEEecCCEEEEEcccCCCCeEeec----ceEEeccC-C---CC-C
Confidence            457899999998665443  689999999988887654322211       12456663    45565432 1   22 2


Q ss_pred             eEEEEe-C---CeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         248 TFTLKT-P---QRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       248 ~F~i~t-~---~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      .|-++. .   .+.|.|.|.|.++++.|+++|+.||.
T Consensus       136 ~~fli~~~~~g~~~yel~a~s~~er~~W~~~I~~Ai~  172 (185)
T 2lg1_A          136 GLFLISMGMTDPEMVEVHASSKEERNSWIQIIQDTIN  172 (185)
T ss_dssp             EEEEECCSSSCCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCCCeEEEEEcCCHHHHHHHHHHHHHHHH
Confidence            455553 2   47999888888888888888888773

>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=97.80  E-value=0.00011  Score=57.46  Aligned_cols=98  Identities=14%  Similarity=0.208  Sum_probs=67.9

Q ss_pred             ccceeeEEEeecC--------CCCCceeeEEEEecc--C--CeEEeecC-CCCCceeEEeccceEEEeccCC---CCCCc
Q psy9639          56 TGHMDGFLMKRGK--------ESGKYHPRRFVLNEI--N--DTIKYYVK-EKKEPKATLRISELNVVIAPSK---IEHPH  119 (321)
Q Consensus        56 ~~~~~G~L~K~g~--------~~~~wk~R~fvL~~~--~--~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~---~~~~~  119 (321)
                      ...+||.|.--..        ....|.++++||...  +  ..|.||.. +...||..|.+..+..+.....   ..+.|
T Consensus        17 e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPkssKpK~~i~cs~I~EVR~tt~LEmPD~~n   96 (136)
T 1v5m_A           17 DIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAIIEVRTTMPLEMPEKDN   96 (136)
T ss_dssp             SCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTTSSSCSSCEETTTCCBCCCCCCSSSCCCTT
T ss_pred             eeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCcccCCccccchhhhhhhhhccccccCCccc
Confidence            4577888854322        235799999999863  2  45789999 9999999999998754432211   23455


Q ss_pred             eeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       120 ~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      -|.+.  ..+ .-.|+|-|.|+.++..|+..||.+..
T Consensus        97 TFVlK--~~n-~~eyi~ea~d~~q~~sWla~Ir~C~~  130 (136)
T 1v5m_A           97 TFVLK--VEN-GAEYILETIDSLQKHSWVADIQGCVD  130 (136)
T ss_dssp             EECCB--CTT-SCBEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             eEEEE--ecC-CcEEEEEcCCHHHHHHHHHHHHhhcC
Confidence            44331  122 12688999999999999999987643

>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=97.76  E-value=0.00021  Score=56.71  Aligned_cols=91  Identities=18%  Similarity=0.225  Sum_probs=65.8

Q ss_pred             eeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-C---CCCceeEEeccceEEEeccCCCCCCceeEEEEeecCce-EE
Q psy9639          59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-E---KKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGST-RH  133 (321)
Q Consensus        59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~---~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~-R~  133 (321)
                      +++.+.+-| ..+.-+.|+|+|.  ++.|.|.+. .   .=..+|.++|.++.++-..+..+.+|+|.|+    ++. ++
T Consensus        31 ~s~v~~~~~-~~~~~~eR~l~LF--~~~Ll~~s~~~~~~~f~~kgklPL~g~~V~~~ed~~~~~~aFeI~----g~~~~~  103 (132)
T 1v61_A           31 MSQVVMQHG-ACEEKEERYFLLF--SSVLIMLSASPRMSGFMYQGKIPIAGMVVNRLDEIEGSDCMFEIT----GSTVER  103 (132)
T ss_dssp             EEEEEBCCS-SSSCCCEEEEEEC--SSCEEEEECSSSSSCCEEEEEECTTTCBCSTTCSSSSSCCCEEEE----CSSSCE
T ss_pred             EeeEEEEEc-ccCcceEEEEEEc--CCeEEEEEecCCCceEEEEEEEecceeEEEeccccccCccEEEEe----cCCCce
Confidence            344444433 3445689999999  889988886 2   2356899999999653233334678888875    333 77


Q ss_pred             EEEEeCChHHHHHHHHHHHhhhh
Q psy9639         134 IYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       134 ~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      +.|+|.|.+|+.+|+.+|+.+..
T Consensus       104 i~v~~~s~eE~~~Wl~~L~~~i~  126 (132)
T 1v61_A          104 IVVHCNNNQDFQEWMEQLNRLTK  126 (132)
T ss_dssp             EEECCCCSHHHHHHHHHHHHHHT
T ss_pred             EEEEeCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999986643

>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1

Probab=97.76  E-value=0.00027  Score=56.10  Aligned_cols=78  Identities=18%  Similarity=0.319  Sum_probs=44.2

Q ss_pred             ceEEEEEeCCeeE-eeeC-CC-CCCcceeEEcccccCceEEecCCCC-C------CCCCCceEEEEeCC--eEEEEEcCC
Q psy9639         197 RKRWFTLDYRKLM-YHEE-PL-SAYPKGEIFLGHCSDGYTVRLGVPP-G------AKDQGFTFTLKTPQ--RWYQFSALS  264 (321)
Q Consensus       197 kkRwfvL~~~~L~-Yyk~-~~-~~~~~g~i~L~~~~~~~~V~~~~~~-~------~~~~~~~F~i~t~~--r~~~f~A~s  264 (321)
                      +.|||.|+.+... |+.+ +. .....+.|+|..+.   .|+.+... .      ......||.|+..+  ++..|.|+|
T Consensus        29 k~r~f~l~~~~~~~w~~s~~~~~~~~~~~i~i~~I~---eIr~G~~s~~~~~~~~~~~~~~~FsIiy~~~~k~LdlvA~s  105 (131)
T 1mai_A           29 RERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQ---EVRMGHRTEGLEKFARDIPEDRCFSIVFKDQRNTLDLIAPS  105 (131)
T ss_dssp             EEEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEE---EEEESSCSHHHHHHCTTSCGGGEEEEEESSSCCCEEEECSS
T ss_pred             eeEEEEECCCCCEEEeCCcCCCCCCcCcEEEHhhhH---HHHCCCCCHHHHhhhhcCCccceEEEEECCCCceEEEEeCC
Confidence            6789999865544 4432 21 23467899998764   35554200 0      01245799999765  577744444


Q ss_pred             HHHHHHHHHHHhh
Q psy9639         265 APDRDQWIQAVQT  277 (321)
Q Consensus       265 ~~e~~~Wv~aL~~  277 (321)
                      +++++.|+.+|+.
T Consensus       106 ~~e~~~Wv~gL~~  118 (131)
T 1mai_A          106 PADAQHWVQGLRK  118 (131)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            4444444444443

>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*

Probab=97.74  E-value=0.00027  Score=65.78  Aligned_cols=93  Identities=18%  Similarity=0.170  Sum_probs=61.7

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC------------------CCcceeEEcccccCceEEecC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS------------------AYPKGEIFLGHCSDGYTVRLG  237 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~------------------~~~~g~i~L~~~~~~~~V~~~  237 (321)
                      .+.++++|.|.++...  +.++.|++.|-++.|.|-+...+                  ...++.|+|..    +.|...
T Consensus       250 ~R~li~~G~l~~~~~~--~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~----~~v~~~  323 (368)
T 1xcg_A          250 TRKMIHEGPLTWRISK--DKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNA----VLIRSV  323 (368)
T ss_dssp             GSCEEEEEEEEECCSS--SCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGG----EEEEEC
T ss_pred             cceEEeecceEeeecC--CCeeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEccc----eeeecc
Confidence            4678999999876443  46899999999999988765421                  11256788854    445442


Q ss_pred             CCCCCCCCCceEEEEeC-----CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         238 VPPGAKDQGFTFTLKTP-----QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       238 ~~~~~~~~~~~F~i~t~-----~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .     +.+++|.|++.     .++|.|+|.|.++++.|+++|++||
T Consensus       324 ~-----~~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai  365 (368)
T 1xcg_A          324 A-----TDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAV  365 (368)
T ss_dssp             S-----SCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             c-----CCCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHH
Confidence            1     23457887753     4788866666666666666666654

>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}

Probab=97.74  E-value=0.00021  Score=67.80  Aligned_cols=94  Identities=18%  Similarity=0.167  Sum_probs=65.2

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC------------------CcceeEEcccccCceEEecC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA------------------YPKGEIFLGHCSDGYTVRLG  237 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~------------------~~~g~i~L~~~~~~~~V~~~  237 (321)
                      .+.++++|.|.+.+..  +.++.|++.|-++.|.+-+...+.                  ..++.|+|..    +.|...
T Consensus       292 ~r~li~eG~l~~~~~~--~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~----~~v~~~  365 (418)
T 3t06_A          292 TRKMIHEGPLTWRISK--DKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNA----VLIRSV  365 (418)
T ss_dssp             GSCEEEEEEEEECCBT--TBCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGG----EEEEEC
T ss_pred             cceeEEeceEEEEeCC--CCeEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechh----ceeccc
Confidence            4678999999987654  368899999999999988743221                  1246777754    445432


Q ss_pred             CCCCCCCCCceEEEEeC-----CeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         238 VPPGAKDQGFTFTLKTP-----QRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       238 ~~~~~~~~~~~F~i~t~-----~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      .     +....|.|...     .++|.|+|.|.++++.||++|+.++.
T Consensus       366 ~-----~~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~  408 (418)
T 3t06_A          366 A-----TDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVR  408 (418)
T ss_dssp             S-----SCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             c-----ccCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHh
Confidence            1     23457888753     37999777777777777777777764

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=97.73  E-value=0.00032  Score=67.44  Aligned_cols=100  Identities=16%  Similarity=0.156  Sum_probs=71.9

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC----CCcceeEEcccccCceEEecCCCCC----CCCCCc
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS----AYPKGEIFLGHCSDGYTVRLGVPPG----AKDQGF  247 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~----~~~~g~i~L~~~~~~~~V~~~~~~~----~~~~~~  247 (321)
                      .+.++++|.|.+..... +..+.|+|.|-++.|.|-+....    ...++.|+|..    +.|.......    ....++
T Consensus       331 ~r~li~~G~l~~~~~~~-~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~----~~v~~~~d~~~~~~~~~~~~  405 (466)
T 2pz1_A          331 SSELIYSGELTRVTQPQ-AKSQQRMFFLFDHQLIYCKKDLLRRDVLYYKGRLDMDG----LEVVDLEDGKDRDLHVSIKN  405 (466)
T ss_dssp             CSCEEEEEEEEEECTTT-CCEEEEEEEEETTEEEEEEECSSCTTCEEEEEEEETTT----CEEEECCSBSCCSSCCCBCE
T ss_pred             cceeEEeeeEEEEecCC-CCeeEEEEEEECCEEEEEEeccccCCceEEeeeeeccc----eEEEeCCCCcccccccccce
Confidence            34678999999886543 46789999999999998875421    12367888854    4454322111    012358


Q ss_pred             eEEEEeC--CeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         248 TFTLKTP--QRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       248 ~F~i~t~--~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      +|.|..+  .+.|.|+|.|.++++.|+++|+.++.
T Consensus       406 ~F~i~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~  440 (466)
T 2pz1_A          406 AFRLHRGATGDSHLLCTRKPEQKQRWLKAFARERE  440 (466)
T ss_dssp             EEEEECSSSCCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence            8999965  57999999999999999999999874

>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1

Probab=97.72  E-value=0.00028  Score=56.05  Aligned_cols=89  Identities=13%  Similarity=0.238  Sum_probs=61.2

Q ss_pred             EEEeecCCCCCceeeEEEEeccCCeEEeecC---CCCCceeEEeccceEEEec---cC-------CCCCCceeEEEEeec
Q psy9639          62 FLMKRGKESGKYHPRRFVLNEINDTIKYYVK---EKKEPKATLRISELNVVIA---PS-------KIEHPHSLQLTFMKD  128 (321)
Q Consensus        62 ~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~---~~~~pkg~I~l~~~~~~~~---~~-------~~~~~~~~~i~~~~~  128 (321)
                      .|.|-++.... +.|+|+|.+ ++.+.|+.+   ....+++.|+|.++..+..   +.       ....+.+|.|.|.. 
T Consensus        18 ~l~K~~~~~~~-k~r~f~l~~-~~~~~w~~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsIiy~~-   94 (131)
T 1mai_A           18 QLLKVKSSSWR-RERFYKLQE-DCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKD-   94 (131)
T ss_dssp             EEEEESSSSCE-EEEEEEECT-TSSEEEECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEESS-
T ss_pred             eEEEECCCCcc-eeEEEEECC-CCCEEEeCCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEEEECC-
Confidence            34555443323 779999985 455557743   2445789999999976542   10       12245678887753 


Q ss_pred             CceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         129 GSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       129 ~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                       ..++++|.|.|.++...|+..|+..
T Consensus        95 -~~k~LdlvA~s~~e~~~Wv~gL~~L  119 (131)
T 1mai_A           95 -QRNTLDLIAPSPADAQHWVQGLRKI  119 (131)
T ss_dssp             -SCCCEEEECSSHHHHHHHHHHHHHH
T ss_pred             -CCceEEEEeCCHHHHHHHHHHHHHH
Confidence             2478999999999999999999854

>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*

Probab=97.70  E-value=0.00062  Score=52.59  Aligned_cols=93  Identities=14%  Similarity=0.105  Sum_probs=66.9

Q ss_pred             ceeeEEEeecCCCC-CceeeEEEEeccCCeEEeecC-CCC----CceeEEeccceEEEeccCCCCCCceeEEEEeecCce
Q psy9639          58 HMDGFLMKRGKESG-KYHPRRFVLNEINDTIKYYVK-EKK----EPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGST  131 (321)
Q Consensus        58 ~~~G~L~K~g~~~~-~wk~R~fvL~~~~~~L~Yy~~-~~~----~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~  131 (321)
                      .++|-|.+-..... .=++++|.|.  ++.|.|-.. ...    .....++|.++.++-.++..+..|+|+|.    ...
T Consensus         9 v~eG~l~el~~~~~k~~~~v~~FLf--ND~Ll~a~~~~~~~~~~~~~~~~~L~~~~v~d~~d~~~~~n~f~i~----~~~   82 (113)
T 1zc3_B            9 VYNGDLVEYEADHMAQLQRVHGFLM--NDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDNPPMKDMFKLL----MFP   82 (113)
T ss_dssp             EEEEEEEEEETTTCCEEEEEEEEEE--SSEEEEEEEECCTTSCEEEEEEEETTTCEEEEECCBTTBSSEEEEE----ETT
T ss_pred             EEeCcEEEEccccCCCCccEEEEec--CCEEEEEEEeccCcccEEEEEEEEcccCEEEECCCCcccceEEEEE----eCC
Confidence            56898888765432 3455788888  789988876 332    34567788887654334444567888874    234


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      +.+.++|+++++..+|+.+|+.++.
T Consensus        83 ~s~~~~aes~~eK~~Wl~~~~~a~~  107 (113)
T 1zc3_B           83 ESRIFQAENAKIKREWLEVLEETKR  107 (113)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcCCHHHHHHHHHHHHHHHH
Confidence            6788999999999999999998864

>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1

Probab=97.70  E-value=0.0002  Score=67.62  Aligned_cols=127  Identities=16%  Similarity=0.123  Sum_probs=84.8

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC----CCcceeEEcccccCceEEecCCCCCC----CCCCc
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS----AYPKGEIFLGHCSDGYTVRLGVPPGA----KDQGF  247 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~----~~~~g~i~L~~~~~~~~V~~~~~~~~----~~~~~  247 (321)
                      .+.++++|.|.+..... +..+.|+|.|-++.|.+-+....    ...++.|+|..    +.|........    ...++
T Consensus       254 ~r~Li~~G~l~~~~~~~-~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~----~~v~~~~d~~~~~~~~~~~~  328 (402)
T 2dfk_A          254 SSELIYTGEMAWIYQPY-GRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDK----YEVIDIEDGRDDDFNVSMKN  328 (402)
T ss_dssp             CCCEEEEEEEEEESSTT-CCCEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGG----EEEEECCSEECSSSCCEESS
T ss_pred             ccceEEeceEEEEeccC-CceEEEEEEeeCCEEEEEEeccccCCceEEeeeeeccc----eEEEecCCCCccccccccce
Confidence            45689999999886533 46789999999999998875421    12467888854    44544221100    01257


Q ss_pred             eEEEEeC--CeEEEEEcCCHHHHHHHHHHHhhccccccccCceEEEEecCCHHHHHHHHHHHHHh
Q psy9639         248 TFTLKTP--QRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTV  310 (321)
Q Consensus       248 ~F~i~t~--~r~~~f~A~s~~e~~~Wv~aL~~ai~~~l~~~~~~~~l~a~s~~e~~~Wi~al~~~  310 (321)
                      +|.|..+  ++.|.|+|.|+++++.|+++|..++........  . -..-++++....+-+.+++
T Consensus       329 ~F~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~~~~--~-g~~~~e~~~k~~~~~~~~~  390 (402)
T 2dfk_A          329 AFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQEDEK--I-GFEISENQKRQAAMTVRKA  390 (402)
T ss_dssp             EEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHH--H-TCCCCHHHHHHHHHHHHHT
T ss_pred             eEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHhhhh--c-CCccCHHHHHHHHHhhhhh
Confidence            8999975  579999999999999999999998842211100  0 0135777777766665554

>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A

Probab=97.69  E-value=0.00024  Score=65.77  Aligned_cols=92  Identities=20%  Similarity=0.230  Sum_probs=61.3

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC-----------CCcceeEEcccccCceEEecCCCCCCCC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS-----------AYPKGEIFLGHCSDGYTVRLGVPPGAKD  244 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~-----------~~~~g~i~L~~~~~~~~V~~~~~~~~~~  244 (321)
                      .+.++++|.|.+.|     .++.|+|.|-++.|.+-+....           ...++.|+|..    +.|....  +...
T Consensus       244 ~r~li~eG~l~~~g-----~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~----~~v~~~~--d~~~  312 (354)
T 1dbh_A          244 CNEFIMEGTLTRVG-----AKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRK----VQINDKD--DTNE  312 (354)
T ss_dssp             CCCEEEEEEEEETT-----CSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCS----CEEEECC--CSSS
T ss_pred             cceEEEEeeEEEEe-----cCceEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccc----eEEEeCC--cccc
Confidence            46789999999884     4678999999999988775421           11357888854    4454422  2123


Q ss_pred             CCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         245 QGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       245 ~~~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      .+++|.|.+++ .+|.|+|.|+++++.|+++|+.+
T Consensus       313 ~~~~F~i~~~~~~~~~l~a~s~~ek~~W~~~i~~~  347 (354)
T 1dbh_A          313 YKHAFEIILKDENSVIFSAKSAEEKNNWMAALISL  347 (354)
T ss_dssp             CCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHH
T ss_pred             cCccEEEecCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence            56899999874 88995555555555555555544

>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}

Probab=97.68  E-value=0.00054  Score=54.67  Aligned_cols=83  Identities=16%  Similarity=0.115  Sum_probs=63.5

Q ss_pred             CCceeeEEEEeccCCeEEeecC-------CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecC--ceEEEEEEeCCh
Q psy9639          71 GKYHPRRFVLNEINDTIKYYVK-------EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDG--STRHIYVYHEES  141 (321)
Q Consensus        71 ~~wk~R~fvL~~~~~~L~Yy~~-------~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~--~~R~~~l~a~s~  141 (321)
                      ++-+.|+|.|.  ++.|.|=+.       ..-..++.++|.+..+. .++....||||.|.-..+|  ..+.+.|.|+++
T Consensus        31 kg~qqR~~FLF--ND~LL~TK~~~kkk~~~~Y~vr~~~~L~gm~V~-~~e~e~~p~~~~l~s~~~G~~~k~~i~~~A~s~  107 (140)
T 3qwm_A           31 LGLHQREIFLF--NDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVL-LFENQYYPNGIRLTSSVPGADIKVLINFNAPNP  107 (140)
T ss_dssp             TTTTEEEEEEE--SSCEEEEECCC---CCCCCCCEEEECCTTEEEE-EECCSSCTTEEEEEECCTTSCCEEEEEEECSSH
T ss_pred             ccccceEEEEe--cchhhheeecccCCCCCceEEEEEeeecceEEE-cccCCCCceEEEEEecCCCCcceEEEEEECCCH
Confidence            45689999999  899998852       23466789999998553 2233458999998644444  468899999999


Q ss_pred             HHHHHHHHHHHhhhh
Q psy9639         142 QSIMNWYHAIRNAKF  156 (321)
Q Consensus       142 ~e~~~W~~aLr~a~~  156 (321)
                      +|+.+|+.+|+.+..
T Consensus       108 ~ER~rwi~dL~esI~  122 (140)
T 3qwm_A          108 QDRKKFTDDLRESIA  122 (140)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988753

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A

Probab=97.59  E-value=0.00042  Score=65.47  Aligned_cols=99  Identities=15%  Similarity=0.143  Sum_probs=70.7

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC-CcceeEEcccccCceEEecCCCCC--CCCCCceEEEEe
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA-YPKGEIFLGHCSDGYTVRLGVPPG--AKDQGFTFTLKT  253 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~-~~~g~i~L~~~~~~~~V~~~~~~~--~~~~~~~F~i~t  253 (321)
                      ...+++|.|....... +.++.|++.|-++.|.+-+...+. ..++.|+|..    +.|.......  ....++.|.|.+
T Consensus       232 grli~~G~l~~~~~~~-~~~~~~~~fLF~d~Ll~~k~k~~~y~~k~~i~l~~----~~v~~~~~~~~~~~~~~~~F~i~~  306 (406)
T 2vrw_B          232 GRPKIDGELKITSVER-RSKTDRYAFLLDKALLICKRRGDSYDLKASVNLHS----FQVRDDSSGERDNKKWSHMFLLIE  306 (406)
T ss_dssp             CSEEEEEEEEEECSSC-CSCEEEEEEEESSEEEEEEEETTEEEEEEEEETTT----EEEEC--------CTTCEEEEEEE
T ss_pred             CcccccccEEEEecCC-CccceEEEEecCCEEEEEEecCCceEEEEEecccc----eeeeecCCCCccCCccceeeEEEe
Confidence            3468899998876544 567999999999999887754322 2467788843    4454422111  112358899986


Q ss_pred             --CCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         254 --PQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       254 --~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                        +.+.|.|.|+|.++++.|+++|+.+|.
T Consensus       307 ~~~~~~~~l~a~s~~ek~~W~~~i~~ai~  335 (406)
T 2vrw_B          307 DQGAQGYELFFKTRELKKKWMEQFEMAIS  335 (406)
T ss_dssp             TTCSCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred             cCCCceEEEeCCCHHHHHHHHHHHHHHHh
Confidence              468999999999999999999999884

>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A

Probab=97.54  E-value=0.00044  Score=67.81  Aligned_cols=99  Identities=13%  Similarity=0.050  Sum_probs=64.2

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC------------------CcceeEEcccccCceEEecC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA------------------YPKGEIFLGHCSDGYTVRLG  237 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~------------------~~~g~i~L~~~~~~~~V~~~  237 (321)
                      .+.++++|.|.++....  .++.|+|.|-++.|.|-+...+.                  .....|+|..    +.|++.
T Consensus       409 ~R~LI~eG~l~~~~~~~--k~~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~----l~v~e~  482 (536)
T 3odw_A          409 KKKLVHEGPLTWRVTKD--KAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTS----AMTREV  482 (536)
T ss_dssp             TSCEEEEEEEEEESCC-----CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEGGG----EEEEEC
T ss_pred             cceeeeecceEEEecCC--CeeEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeeccc----ceeecc
Confidence            35689999998876543  68999999999999887743221                  0123577744    455552


Q ss_pred             CCCCCCCCCceEEEEe----CCeEEEEEcCCHHHHHHHHHHHhhcccccccc
Q psy9639         238 VPPGAKDQGFTFTLKT----PQRWYQFSALSAPDRDQWIQAVQTGFTFTLKT  285 (321)
Q Consensus       238 ~~~~~~~~~~~F~i~t----~~r~~~f~A~s~~e~~~Wv~aL~~ai~~~l~~  285 (321)
                      .     .....|.++.    +..+|.|.|.|.+|++.||++|++||.....+
T Consensus       483 ~-----~d~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~~~  529 (536)
T 3odw_A          483 A-----TDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLKVP  529 (536)
T ss_dssp             T-----TCTTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSCCC
T ss_pred             c-----ccCCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCCCc
Confidence            2     1233455543    35889988888888888888888887544433

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A

Probab=97.54  E-value=0.00042  Score=68.72  Aligned_cols=98  Identities=16%  Similarity=0.132  Sum_probs=71.5

Q ss_pred             CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC-CCcceeEEcccccCceEEecCCCC--CCCCCCceEEEEeC
Q psy9639         178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS-AYPKGEIFLGHCSDGYTVRLGVPP--GAKDQGFTFTLKTP  254 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~-~~~~g~i~L~~~~~~~~V~~~~~~--~~~~~~~~F~i~t~  254 (321)
                      ..+++|.|.+..... +..+.|++.|-++.|.|-+...+ ...++.|+|..    +.|......  +....++.|.|...
T Consensus       405 rll~~G~l~~~~~~~-~~~~~r~~fLF~d~Ll~~k~~~~~y~~k~~i~L~~----~~v~~~~~~~~~~~~~~~~f~i~~~  479 (587)
T 3ky9_A          405 RPKIDGELKITSVER-RSKMDRYAFLLDKALLICKRRGDSYDLKDFVNLHS----FQVRDDSSGDRDNKKWSHMFLLIED  479 (587)
T ss_dssp             CEEEEEEEEEECSSC-CSCEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG----EEEEEC-----CCCTTCEEEEEEET
T ss_pred             ceEEEeeEEEEeccC-CCcceEEEEEECCEEEEEEecCCEEEeeeeechhh----ceeeecCCCCcccccccceeEEEEc
Confidence            468899999876655 67899999999999998775422 23578888854    455543211  11124578999986


Q ss_pred             C--eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         255 Q--RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       255 ~--r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      .  ++|.|.|.|.++++.|+++|+.+|.
T Consensus       480 ~~~~~~~L~A~S~eeK~~Wi~~I~~ai~  507 (587)
T 3ky9_A          480 QGAQGYELFFKTRELKKKWMEQFEMAIS  507 (587)
T ss_dssp             TC---CEEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEeCCHHHHHHHHHHHHHHhh
Confidence            4  8999999999999999999999983

>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}

Probab=97.49  E-value=0.036  Score=47.34  Aligned_cols=183  Identities=16%  Similarity=0.202  Sum_probs=108.5

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccC---C--eEEeecC-C----CCCceeEEeccceEEEeccC--CCCCCceeEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEIN---D--TIKYYVK-E----KKEPKATLRISELNVVIAPS--KIEHPHSLQL  123 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~---~--~L~Yy~~-~----~~~pkg~I~l~~~~~~~~~~--~~~~~~~~~i  123 (321)
                      +...||....+.+  +.||+||+||+...   +  .|.-|++ .    ...+|.+|.|.++... .+.  ..+..|-+.|
T Consensus         8 ~~v~eg~vk~r~~--KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~~~KaslsL~~~~Gl-E~g~~ldk~s~TlAI   84 (224)
T 3ml4_A            8 AALVEGQVKLRDG--KKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGLRERSSLTLEDICGL-EPALPYEGLAHTLAI   84 (224)
T ss_dssp             CCSEEEEEEEC-----CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCCCCSEEEEECCEEEE-EEEEEETTEEEEEEE
T ss_pred             ceeEEEeeeeecC--CceeeEEEEEEcCCCchheEEEEEEcChhhhhcCCcccceeehHHhcCc-cccccccCcccEEEE
Confidence            3567898887654  58999999997522   2  4668877 3    4677999999997442 211  2244555555


Q ss_pred             EEeecCceEEEEEEeCChHHHHHHHHHHHhhhhhhccccCCCCChhhhhhhhCCCcceEEEEE-EeCCCCCCCcceEEEE
Q psy9639         124 TFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLW-KTGPKNADAYRKRWFT  202 (321)
Q Consensus       124 ~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~~l~~~~p~~~~~~l~~~~~~~~~k~G~L~-K~g~~~~~~WkkRwfv  202 (321)
                      .+.    ..++.|..|+.+.+..|-..|+...-..                      ..-+.. ..+.+. . --..+..
T Consensus        85 Ic~----d~~~vLAFds~e~l~~W~~~l~~slGe~----------------------~rF~V~v~Ps~kL-~-sG~a~Lh  136 (224)
T 3ml4_A           85 ICL----SQAVMLGFDSHEAMCAWDTRIRYALGEV----------------------HRFHVTVAPGTKL-E-SGPATLH  136 (224)
T ss_dssp             EES----SCEEEEECSSHHHHHHHHHHHHHHTSSE----------------------EEEEEEECSSSSS-C-CEEEEEE
T ss_pred             Eec----CcEEEEEeCCHHHHHHHHHHHhhccCCC----------------------ceEEEEecCcccc-C-CCcEEEE
Confidence            443    3557889999999999998887532110                      000000 001111 0 1123344


Q ss_pred             EeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe----CCeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         203 LDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT----PQRWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       203 L~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t----~~r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      +....|..-..... ...|.-+|...-. |-.        ....|+|+.-+    ..-.|+|.+...++...=++.+-.+
T Consensus       137 l~~~~l~L~~~~~~-~~l~~W~L~~LRR-YG~--------~~~~F~FE~grrC~~geG~f~f~t~qge~I~~lfd~~~rg  206 (224)
T 3ml4_A          137 LCNDILVLARDIPP-TVMGQWKLSDLRR-YGA--------VPNGFIFEGGTRCGYWAGVFFLSSAEGEQMSFLFDCIVRG  206 (224)
T ss_dssp             EETTEEEEEETTTT-EEEEEEEGGGEEE-EEE--------ETTEEEEEECGGGGGGCEEEEEECSCHHHHHHHHHHHTTT
T ss_pred             ecCCcEEEccCCCc-cEEEEcchHHhhh-hcc--------cCCEeEEecCCcCCCCCCEEEEecCcHHHHHHHHHHHHcC
Confidence            45555555444433 3577788865422 211        12357777753    2589999999999888777777666


Q ss_pred             c
Q psy9639         279 F  279 (321)
Q Consensus       279 i  279 (321)
                      |
T Consensus       207 ~  207 (224)
T 3ml4_A          207 I  207 (224)
T ss_dssp             E
T ss_pred             C
Confidence            5

>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A

Probab=97.46  E-value=0.00079  Score=63.02  Aligned_cols=95  Identities=17%  Similarity=0.110  Sum_probs=66.4

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC------------------CcceeEEcccccCceEEecC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA------------------YPKGEIFLGHCSDGYTVRLG  237 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~------------------~~~g~i~L~~~~~~~~V~~~  237 (321)
                      .+.++++|.|..+...  +.++.|++.|-++.|.+-+...+.                  ..++.|+|..    +.|...
T Consensus       254 ~R~li~eG~l~~~~~~--~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~----~~v~~~  327 (385)
T 1txd_A          254 KRKMIHEGPLVWKVNR--DKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLST----VLVRQV  327 (385)
T ss_dssp             GSCEEEEEEEEEESSS--SCBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGG----EEEEEC
T ss_pred             cceEEEECcEEEEcCC--CCeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceeccc----cccccc
Confidence            4688999999876543  357899999999999886643221                  1256788754    445442


Q ss_pred             CCCCCCCCCceEEEEeC---CeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         238 VPPGAKDQGFTFTLKTP---QRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       238 ~~~~~~~~~~~F~i~t~---~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      .  +  +.+..|.|...   .++|.|+|.|.++++.|+++|+++|.
T Consensus       328 ~--~--d~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~  369 (385)
T 1txd_A          328 A--T--DNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAA  369 (385)
T ss_dssp             C--C---CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             c--c--CCceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHH
Confidence            1  1  23445666542   58999999999999999999998884

>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A

Probab=97.42  E-value=0.00083  Score=62.60  Aligned_cols=94  Identities=17%  Similarity=0.122  Sum_probs=60.0

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCC------------------cceeEEcccccCceEEecC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAY------------------PKGEIFLGHCSDGYTVRLG  237 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~------------------~~g~i~L~~~~~~~~V~~~  237 (321)
                      .+.++++|.|..+...  +.++.|+|.|-++.|.|-+...+..                  ..+.|+|..    ..|++.
T Consensus       256 ~r~li~eG~l~~~~~~--~~~~~~~~fLF~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~----~~v~e~  329 (377)
T 3p6a_A          256 KKKLVHEGPLTWRVTK--DKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTS----AMTREV  329 (377)
T ss_dssp             TSCEEEEEEEEEESSS--SCEEEEEEEEESSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGG----EEEEEC
T ss_pred             cceEEEECCcEEEecC--CCeEEEEEEeeCCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechh----hhcccc
Confidence            4678999999877654  3689999999999998877432210                  123577744    445542


Q ss_pred             CCCCCCCCCceEEEEe---CCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         238 VPPGAKDQGFTFTLKT---PQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       238 ~~~~~~~~~~~F~i~t---~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .  .  +....|.|.+   +...|.|.|.|.++++.||++|++||
T Consensus       330 ~--~--~~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai  370 (377)
T 3p6a_A          330 A--T--DHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETA  370 (377)
T ss_dssp             T--T--CTTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             c--c--ccceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHH
Confidence            2  1  2233454544   34788877777777777777776665

>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B

Probab=97.42  E-value=2.1e-05  Score=76.43  Aligned_cols=93  Identities=20%  Similarity=0.241  Sum_probs=0.0

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC-------------------CcceeEEcccccCceEEecC
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA-------------------YPKGEIFLGHCSDGYTVRLG  237 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~-------------------~~~g~i~L~~~~~~~~V~~~  237 (321)
                      +.++++|.|.+.     +.++.|||.|-++.|.|.+.....                   ..++.|+|..    ..|...
T Consensus       251 r~li~eG~l~~~-----~~~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~----~~v~~~  321 (510)
T 3jzy_A          251 RKLLHSGKLYKT-----KSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNE----VLVKLP  321 (510)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ceeEEeceEEEc-----CCCcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhh----eEEecc
Confidence            567888998865     356899999999999887733221                   0145566643    334332


Q ss_pred             CCCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         238 VPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       238 ~~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                        .+..+.+++|.|..+.++|.|+|.|.++++.|+++|+.++.
T Consensus       322 --~d~~~~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~  362 (510)
T 3jzy_A          322 --TDPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASE  362 (510)
T ss_dssp             -------------------------------------------
T ss_pred             --CCCCccccceeeeccceeEEeccCCHHHHHHHHHHHHHHHH
Confidence              12234578999999999999999999999999999999985

>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A

Probab=97.37  E-value=0.001  Score=61.57  Aligned_cols=95  Identities=12%  Similarity=0.115  Sum_probs=66.4

Q ss_pred             CCcceEEEEEEeCCC--C--------CCCcceEEEEEeCCeeEeeeCCCCC----------CcceeEEcccccCceEEec
Q psy9639         177 RDFGREGWLWKTGPK--N--------ADAYRKRWFTLDYRKLMYHEEPLSA----------YPKGEIFLGHCSDGYTVRL  236 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~--~--------~~~WkkRwfvL~~~~L~Yyk~~~~~----------~~~g~i~L~~~~~~~~V~~  236 (321)
                      +..+++|.|....+.  +        ....+.|++.|-++.|.|-+.....          ..++.|+|..    +.|.+
T Consensus       208 g~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~----~~v~e  283 (353)
T 1kz7_A          208 GKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTA----VGITE  283 (353)
T ss_dssp             CCEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGG----EEEEC
T ss_pred             hhhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEccc----ceeeE
Confidence            457899999753211  0        1247889999999999887754211          1256777754    34443


Q ss_pred             CCCCCCCCCCceEEEEe--CCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         237 GVPPGAKDQGFTFTLKT--PQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       237 ~~~~~~~~~~~~F~i~t--~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ..    .+.+++|.|..  +.++|.|+|.|.++++.|+++|+++|
T Consensus       284 ~~----~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai  324 (353)
T 1kz7_A          284 NV----KGDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVL  324 (353)
T ss_dssp             CB----TTBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             cC----CCCCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence            21    23467899986  46899999999999999999999987

>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A

Probab=97.36  E-value=0.00098  Score=61.43  Aligned_cols=94  Identities=13%  Similarity=0.045  Sum_probs=60.4

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCC--CC---C-cceeEEcccccCceEEecCCCCCC-------
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPL--SA---Y-PKGEIFLGHCSDGYTVRLGVPPGA-------  242 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~--~~---~-~~g~i~L~~~~~~~~V~~~~~~~~-------  242 (321)
                      .+..+++|.|.+.+     + +.|++.|-++.|.+-+...  +.   . .++.|+|..    +.|........       
T Consensus       229 ~r~li~~G~l~~~~-----~-~~~~~fLF~d~Ll~~k~~~~~~~~~~~v~k~~i~l~~----l~v~~~~d~~~~~~~s~~  298 (346)
T 2z0q_A          229 SRVLCCHGELKNNR-----G-VKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKD----LTLEDLQDGEVRLGGSLR  298 (346)
T ss_dssp             CCCEEEEEEEEETT-----S-CEEEEEEESSEEEEEEEEEETTEEEEEESSCCEEGGG----CEEEECCTTTSCCCSCC-
T ss_pred             CeEEEEeceeEECC-----C-cEEEEEECCCcEEEEEEeccCCceeeeeecCCcchhh----ceeeecCCCccccCcccc
Confidence            45678999997632     2 6899999999998877532  11   1 356788854    44554321100       


Q ss_pred             ------CCCCceEEEEe----CCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         243 ------KDQGFTFTLKT----PQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       243 ------~~~~~~F~i~t----~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                            ...+++|.|..    ++.+|.|+|.|.++++.|+++|++||
T Consensus       299 g~~~~~~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai  345 (346)
T 2z0q_A          299 GAFSNNERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK  345 (346)
T ss_dssp             -CCSHHHHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             ccccCCcccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence                  01357899985    36789977777777777777766654

>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A

Probab=97.30  E-value=0.0016  Score=59.17  Aligned_cols=95  Identities=18%  Similarity=0.199  Sum_probs=60.8

Q ss_pred             CCcceEEEEEEeCCC-CCCCcceEEEEEeCCeeEeeeCCCCC------CcceeEEcccccCceEEecCCCCCCCCCCceE
Q psy9639         177 RDFGREGWLWKTGPK-NADAYRKRWFTLDYRKLMYHEEPLSA------YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTF  249 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~-~~~~WkkRwfvL~~~~L~Yyk~~~~~------~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F  249 (321)
                      +..+..|-+...++. ..+..+.|+|.|-++.|.|-+...+.      ..++.|+|..    +.|.+..    .+.++.|
T Consensus       201 g~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~----~~v~e~~----~~~~~~F  272 (311)
T 1nty_A          201 GELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSE----LGVTEHV----EGDPCKF  272 (311)
T ss_dssp             CCEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGG----EEEECCC----TTCTTEE
T ss_pred             CCceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccc----eeeEEcc----CCCCceE
Confidence            356777877665332 12456899999999999887643211      2367788854    4454322    1346789


Q ss_pred             EEEe-----CCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         250 TLKT-----PQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       250 ~i~t-----~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .|..     ++..|.|+|.|+++++.|+++|+.+|
T Consensus       273 ~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i  307 (311)
T 1nty_A          273 ALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVI  307 (311)
T ss_dssp             EEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHH
Confidence            9986     35678866666666666666666655

>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}

Probab=97.20  E-value=0.0019  Score=54.36  Aligned_cols=94  Identities=16%  Similarity=0.220  Sum_probs=62.9

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCC-------ceeEEeccceEEEeccCCCCCCceeEEEEeecC
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKE-------PKATLRISELNVVIAPSKIEHPHSLQLTFMKDG  129 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~-------pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~  129 (321)
                      .++|-|..+... +.++.||++|.  ++.|.|-.. +++.       ...+|+|..+.+ ....  ..+.+|.+......
T Consensus        72 l~eG~L~~k~~~-~~~~d~~~fLf--~D~Ll~~~~~~~ky~~~~~~~~~pvi~L~~~~v-re~a--~d~~~~fli~~~~~  145 (185)
T 2lg1_A           72 VRDGSVFLKNAA-GRLKEVQAVLL--TDILVFLQEKDQKYIFASLDQKSTVISLKKLIV-REVA--HEEKGLFLISMGMT  145 (185)
T ss_dssp             EEEEEEEEECTT-CCEEEEEEEEE--SSEEECCEEETTEEECCCCSSSCSEEESSSCEE-ECCS--SCSSEEEEECCSSS
T ss_pred             eeeceEEEeccC-CCeeeEEEEee--cCEEEEEEecCCEEEEEcccCCCCeEeecceEE-eccC--CCCCeEEEEEecCC
Confidence            679999744433 37899999999  788866544 2221       125678887743 2211  23456654333233


Q ss_pred             ceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         130 STRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       130 ~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      +.+.|-|+|.|.++...|+.+|+.|.-.
T Consensus       146 g~~~yel~a~s~~er~~W~~~I~~Ai~~  173 (185)
T 2lg1_A          146 DPEMVEVHASSKEERNSWIQIIQDTINT  173 (185)
T ss_dssp             CCCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence            3688999999999999999999987543

>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}

Probab=97.07  E-value=0.0019  Score=61.28  Aligned_cols=90  Identities=24%  Similarity=0.358  Sum_probs=63.5

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-C--CCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEE
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-E--KKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHI  134 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~--~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~  134 (321)
                      .++|.|.+.++  +.++.|+|.|.  ++.|.|-+. .  .-..++.|+|.++.+. .+...+.+++|.|    .++.+.|
T Consensus       245 i~~g~l~~~~~--~~~~~r~~fLF--~d~Ll~~k~~~~~~y~~k~~i~L~~l~v~-~~~~~~~~~~f~i----~~~~~~~  315 (434)
T 3mpx_A          245 LKEGTLMKVTG--KNRRPRHLFLM--NDVLLYTYPQKDGKYRLKNTLAVANMKVS-RPVMEKVPYALKI----ETSESCL  315 (434)
T ss_dssp             EECCEEEEEET--TEEEEEEEEEE--SSEEEEEEECTTSCEEEEEEEEC-----C-CCCCTTSCSEEEE----ECSSCEE
T ss_pred             EecceEEEEeC--CCceEEEEEEE--CCEEEEEEecCCCeEEEEEEEEcCCcEEE-ecCCCCCCeeEEE----ecCCeEE
Confidence            67899988654  35789999999  889988876 3  2346789999988543 2222345677665    3556789


Q ss_pred             EEEeCChHHHHHHHHHHHhhhh
Q psy9639         135 YVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      .|+|.|+++...|+++|+.+..
T Consensus       316 ~l~a~s~~ek~~W~~~i~~ai~  337 (434)
T 3mpx_A          316 MLSASSCAERDEWYGCLSRALP  337 (434)
T ss_dssp             EEECSSHHHHHHHHHHHHHC--
T ss_pred             EEecCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999988754

>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}

Probab=97.06  E-value=0.0039  Score=57.70  Aligned_cols=95  Identities=17%  Similarity=0.210  Sum_probs=66.0

Q ss_pred             CCcceEEEEEEeCCC----CCCCcceEEEEEeCCeeEeeeCCCC---------CCcceeEEcccccCceEEecCCCCCCC
Q psy9639         177 RDFGREGWLWKTGPK----NADAYRKRWFTLDYRKLMYHEEPLS---------AYPKGEIFLGHCSDGYTVRLGVPPGAK  243 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~----~~~~WkkRwfvL~~~~L~Yyk~~~~---------~~~~g~i~L~~~~~~~~V~~~~~~~~~  243 (321)
                      ...++.|-+....+.    ..+..+.|++.|-++.|.+-+...+         ...++.|+|..    +.|.+..    .
T Consensus       205 ~~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~----~~v~~~~----~  276 (354)
T 2rgn_B          205 GKLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSC----LGLEGNL----Q  276 (354)
T ss_dssp             CCEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC--------CCEEEEEEEEGGG----EEEEESG----G
T ss_pred             ccccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeeccc----eeeeecc----C
Confidence            456778877654321    1246789999999999988775432         12356778754    3454321    2


Q ss_pred             CCCceEEEEeC-----CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         244 DQGFTFTLKTP-----QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       244 ~~~~~F~i~t~-----~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +.++.|.|...     ...|.|+|.|.++++.|+++|+++|
T Consensus       277 ~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai  317 (354)
T 2rgn_B          277 GDPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQIL  317 (354)
T ss_dssp             GCTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHH
Confidence            34678999862     3799999999999999999999988

>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}

Probab=96.97  E-value=0.0055  Score=57.85  Aligned_cols=94  Identities=13%  Similarity=0.139  Sum_probs=68.6

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC------------------CCceeEEeccceEEEeccCCCCCC
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK------------------KEPKATLRISELNVVIAPSKIEHP  118 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~------------------~~pkg~I~l~~~~~~~~~~~~~~~  118 (321)
                      .++|.|.++++. +.++.|++.|.  ++.|.|-+. ++                  ...++.|+|.++.+. .  ..+.+
T Consensus       296 i~eG~l~~~~~~-~~~~~~~~fLF--~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~-~--~~~~~  369 (418)
T 3t06_A          296 IHEGPLTWRISK-DKTLDLHVLLL--EDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIR-S--VATDK  369 (418)
T ss_dssp             EEEEEEEECCBT-TBCCEEEEEEE--SSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEE-E--CSSCS
T ss_pred             EEeceEEEEeCC-CCeEEEEEEec--CCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceec-c--ccccC
Confidence            678999876543 46889999999  889888764 22                  123578999988653 1  23566


Q ss_pred             ceeEEEEeec-CceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         119 HSLQLTFMKD-GSTRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       119 ~~~~i~~~~~-~~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      ++|.+.+... +..+.|.|.|.|.++...|+.+|+.+...
T Consensus       370 ~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~  409 (418)
T 3t06_A          370 RAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN  409 (418)
T ss_dssp             SEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence            7887765432 33478999999999999999999987543

>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A

Probab=96.94  E-value=0.0033  Score=57.87  Aligned_cols=91  Identities=11%  Similarity=0.170  Sum_probs=64.8

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCC------CceeEEeccceEEEeccCC---C------------
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKK------EPKATLRISELNVVIAPSK---I------------  115 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~------~pkg~I~l~~~~~~~~~~~---~------------  115 (321)
                      .++|.|.+..+     +.|++.|.  ++.|.+-+. ...      ..++.|+|.++.+.-.++.   .            
T Consensus       233 i~~G~l~~~~~-----~~~~~fLF--~d~Ll~~k~~~~~~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~  305 (346)
T 2z0q_A          233 CCHGELKNNRG-----VKLHVFLF--QEVLVITRAVTHNEQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNE  305 (346)
T ss_dssp             EEEEEEEETTS-----CEEEEEEE--SSEEEEEEEEEETTEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCSHHH
T ss_pred             EEeceeEECCC-----cEEEEEEC--CCcEEEEEEeccCCceeeeeecCCcchhhceeeecCCCccccCccccccccCCc
Confidence            56888876432     78999999  888888775 221      1467899998855432211   0            


Q ss_pred             CCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         116 EHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       116 ~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      ..+++|.|.+...+..+.|.|+|.|.++...|+++|+.+.
T Consensus       306 ~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai  345 (346)
T 2z0q_A          306 RVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK  345 (346)
T ss_dssp             HTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             ccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence            1357888876544456889999999999999999998763

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A

Probab=96.86  E-value=0.0064  Score=57.22  Aligned_cols=96  Identities=15%  Similarity=0.136  Sum_probs=68.7

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-C-CCCceeEEeccceEEEeccCCC----CCCceeEEEEeecCce
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-E-KKEPKATLRISELNVVIAPSKI----EHPHSLQLTFMKDGST  131 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~-~~~pkg~I~l~~~~~~~~~~~~----~~~~~~~i~~~~~~~~  131 (321)
                      .++|.|.......+..+.|++.|.  ++.|.+-+. . .-..++.|+|..+.+.-.+...    ..+++|.|...  .+.
T Consensus       235 i~~G~l~~~~~~~~~~~~~~~fLF--~d~Ll~~k~k~~~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~--~~~  310 (406)
T 2vrw_B          235 KIDGELKITSVERRSKTDRYAFLL--DKALLICKRRGDSYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIED--QGA  310 (406)
T ss_dssp             EEEEEEEEECSSCCSCEEEEEEEE--SSEEEEEEEETTEEEEEEEEETTTEEEEC--------CTTCEEEEEEET--TCS
T ss_pred             cccccEEEEecCCCccceEEEEec--CCEEEEEEecCCceEEEEEecccceeeeecCCCCccCCccceeeEEEec--CCC
Confidence            568999887655567899999999  888888776 3 3356789999988654322211    13467776532  345


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      +.|.|+|.|.++...|+++|+.+...
T Consensus       311 ~~~~l~a~s~~ek~~W~~~i~~ai~~  336 (406)
T 2vrw_B          311 QGYELFFKTRELKKKWMEQFEMAISN  336 (406)
T ss_dssp             CEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEeCCCHHHHHHHHHHHHHHHhh
Confidence            77999999999999999999887543

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=96.83  E-value=0.0097  Score=57.04  Aligned_cols=96  Identities=17%  Similarity=0.186  Sum_probs=68.9

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC----CCceeEEeccceEEEeccCCC------CCCceeEEEEe
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK----KEPKATLRISELNVVIAPSKI------EHPHSLQLTFM  126 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~----~~pkg~I~l~~~~~~~~~~~~------~~~~~~~i~~~  126 (321)
                      .++|.|.+..+..+..+.|+|.|.  ++.|.|-+. ..    -..++.|+|.++.+.-.+...      ..+++|.|.. 
T Consensus       335 i~~G~l~~~~~~~~~~~~r~~fLF--~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~-  411 (466)
T 2pz1_A          335 IYSGELTRVTQPQAKSQQRMFFLF--DHQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHR-  411 (466)
T ss_dssp             EEEEEEEEECTTTCCEEEEEEEEE--TTEEEEEEECSSCTTCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEEC-
T ss_pred             EEeeeEEEEecCCCCeeEEEEEEE--CCEEEEEEeccccCCceEEeeeeeccceEEEeCCCCcccccccccceeEEEEe-
Confidence            678999887765567889999999  888888765 21    235789999988654322211      2245666642 


Q ss_pred             ecCceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         127 KDGSTRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       127 ~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                       ....+.|.|+|.|.++...|+++|+.+...
T Consensus       412 -~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~  441 (466)
T 2pz1_A          412 -GATGDSHLLCTRKPEQKQRWLKAFAREREQ  441 (466)
T ss_dssp             -SSSCCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence             223468999999999999999999988654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=96.82  E-value=0.0099  Score=59.70  Aligned_cols=95  Identities=18%  Similarity=0.277  Sum_probs=64.6

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe-C
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT-P  254 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t-~  254 (321)
                      ...+++.|++.|.++.....|++|++.|..+.|.......  .+...+.+..+   ..|....    ....++|.+.+ .
T Consensus       556 ~~~~i~~G~~~k~~g~f~~~~~rR~~~l~p~r~e~~~e~~--~~~~l~~~~~v---~~v~k~~----i~~~~~l~~~~k~  626 (689)
T 3v5w_A          556 GKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGE--APQSLLTMEEI---QSVEETQ----IKERKCLLLKIRG  626 (689)
T ss_dssp             SSCCCEEEEEEEC-------CEEEEEEEETTEEEEECTTS--CCCEEEEGGGE---EEEEEEE----SSSCEEEEEEETT
T ss_pred             CCcceeecccccCCCcccchhhhhccccCCCcccccccCC--CCcceeeeccc---cccccCc----CCCCcceeeeecC
Confidence            4577899999999887657899999999999988775442  34445666543   2232221    12346788885 4


Q ss_pred             CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         255 QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       255 ~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .++|.+.++|+.++.+|..+|+.+-
T Consensus       627 ~k~f~~~t~~~~~~~~W~~~i~~~~  651 (689)
T 3v5w_A          627 GKQFILQCDSDPELVQWKKELRDAY  651 (689)
T ss_dssp             TEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCChHHHHHHHHHHHHHH
Confidence            7999999999999999999998753

>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A

Probab=96.81  E-value=0.0041  Score=57.35  Aligned_cols=91  Identities=14%  Similarity=0.268  Sum_probs=66.6

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC--C---------CceeEEeccceEEEeccCCCCCCceeEEEE
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK--K---------EPKATLRISELNVVIAPSKIEHPHSLQLTF  125 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~--~---------~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~  125 (321)
                      .++|.|.+.|    ..+.|+|.|.  ++.|.+-+. ..  .         ..++.|+|.++.+.-.++..+.+++|.|..
T Consensus       248 i~eG~l~~~g----~~~~~~~fLF--~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d~~~~~~~F~i~~  321 (354)
T 1dbh_A          248 IMEGTLTRVG----AKHERHIFLF--DGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEIIL  321 (354)
T ss_dssp             EEEEEEEETT----CSSCEEEEEE--SSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCSSSCCSEEEECC
T ss_pred             EEEeeEEEEe----cCceEEEEEe--CCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCcccccCccEEEec
Confidence            6788888885    5789999999  888887766 31  1         236899999986543333334567877642


Q ss_pred             eecCceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         126 MKDGSTRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       126 ~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                         ...+.|.|+|.|.++...|+.+|+.+..+
T Consensus       322 ---~~~~~~~l~a~s~~ek~~W~~~i~~~~~~  350 (354)
T 1dbh_A          322 ---KDENSVIFSAKSAEEKNNWMAALISLQYR  350 (354)
T ss_dssp             ---TTSCCEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred             ---CCCCEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence               11367999999999999999999877543

>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A

Probab=96.78  E-value=0.0045  Score=65.42  Aligned_cols=93  Identities=19%  Similarity=0.242  Sum_probs=69.3

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC-----------CCcceeEEcccccCceEEecCCCCCCCC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS-----------AYPKGEIFLGHCSDGYTVRLGVPPGAKD  244 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~-----------~~~~g~i~L~~~~~~~~V~~~~~~~~~~  244 (321)
                      .+.++++|.|.+.+.+     +.|++.|-++.|.+-+....           ...++.|+|..+    .|...  .+...
T Consensus       441 ~r~Li~eG~l~~~~~k-----~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l----~V~~~--~d~~~  509 (1049)
T 3ksy_A          441 CNEFIMEGTLTRVGAK-----HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKV----QINDK--DDTNE  509 (1049)
T ss_dssp             CSCCCCEEEEEETTCS-----SCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSC----CCCCC--CCSSS
T ss_pred             cceEEEeceEEEEccC-----ceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCce----EEEEC--CCCcc
Confidence            4568999999987632     78999999999999875522           235678888543    34332  12224


Q ss_pred             CCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         245 QGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       245 ~~~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .+++|.|...+ .+|.|.|.|.++++.|+++|+.+.
T Consensus       510 ~~~~F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q  545 (1049)
T 3ksy_A          510 YKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQ  545 (1049)
T ss_dssp             CCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             ccceEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHH
Confidence            56899998764 699999999999999999998754

>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1

Probab=96.76  E-value=0.014  Score=54.89  Aligned_cols=96  Identities=13%  Similarity=0.146  Sum_probs=69.2

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC----CCceeEEeccceEEEeccCCC------CCCceeEEEEe
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK----KEPKATLRISELNVVIAPSKI------EHPHSLQLTFM  126 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~----~~pkg~I~l~~~~~~~~~~~~------~~~~~~~i~~~  126 (321)
                      .++|.|.+..+..+..+.|+|.|.  ++.|.+-+. ..    -..++.|+|.++.+.-.+...      ..+++|.|...
T Consensus       258 i~~G~l~~~~~~~~k~~~r~~fLF--~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~  335 (402)
T 2dfk_A          258 IYTGEMAWIYQPYGRNQQRVFFLF--DHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNK  335 (402)
T ss_dssp             EEEEEEEEESSTTCCCEEEEEEEE--TTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEES
T ss_pred             EEeceEEEEeccCCceEEEEEEee--CCEEEEEEeccccCCceEEeeeeeccceEEEecCCCCccccccccceeEEEEEC
Confidence            678999887765566889999999  888888765 21    235789999988654322211      12467777532


Q ss_pred             ecCceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         127 KDGSTRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       127 ~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                        .+.+.|.|+|.|.++...|+++|+.+...
T Consensus       336 --~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~  364 (402)
T 2dfk_A          336 --ETEEVHLFFAKKLEEKIRWLRAFREERKM  364 (402)
T ss_dssp             --SSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             --CCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence              23468999999999999999999887654

>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1

Probab=96.75  E-value=0.019  Score=53.42  Aligned_cols=98  Identities=10%  Similarity=0.027  Sum_probs=57.9

Q ss_pred             CCcceEEEEEEeCCCC----CCCcceEEEEEeCCeeEe-eeCCC-------------------CCCcceeEEcccccCce
Q psy9639         177 RDFGREGWLWKTGPKN----ADAYRKRWFTLDYRKLMY-HEEPL-------------------SAYPKGEIFLGHCSDGY  232 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~----~~~WkkRwfvL~~~~L~Y-yk~~~-------------------~~~~~g~i~L~~~~~~~  232 (321)
                      ...+..|-+...++..    .+.-+.|++.|-++.|.+ .+...                   ....++.|+|..    +
T Consensus       236 g~ll~~~~~~~~~~~~~~~~~~k~~~~~~fLF~d~lll~~k~~~~~k~~~~~~~~~s~~~~~~~y~~k~~i~l~~----~  311 (377)
T 1foe_A          236 GDLLLHTSVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEA----L  311 (377)
T ss_dssp             GGEEEEEEEEESSCCHHHHTTCSSCEEEEEEETTEEEEEECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGG----E
T ss_pred             cceeeecceeeccCchhhccccccceEEEEEcCCeEEEEeccccccccccccccccccccCCCceeEeeeccccc----e
Confidence            3467778776543210    124467999999887665 44221                   112357788854    4


Q ss_pred             EEecCCCCCCCCCCceEEEE--------eCCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         233 TVRLGVPPGAKDQGFTFTLK--------TPQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       233 ~V~~~~~~~~~~~~~~F~i~--------t~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .|.... .........|.|.        .+.++|.|+|.|.++++.|+.+|.++|
T Consensus       312 ~v~~~~-~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i  365 (377)
T 1foe_A          312 QVRALP-SADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSIL  365 (377)
T ss_dssp             EEECCC-CTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEecC-CCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHh
Confidence            555432 2211223457776        346788877777777777777777766

>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*

Probab=96.75  E-value=0.013  Score=54.33  Aligned_cols=92  Identities=14%  Similarity=0.148  Sum_probs=65.7

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCC------------------CceeEEeccceEEEeccCCCCCC
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKK------------------EPKATLRISELNVVIAPSKIEHP  118 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~------------------~pkg~I~l~~~~~~~~~~~~~~~  118 (321)
                      .++|.|.+++. .+.++.|++.|.  ++.|.|-+. +++                  ..++.|+|.++.+.-.   .+.+
T Consensus       254 i~~G~l~~~~~-~~~~~~~~~fLF--~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~---~~~~  327 (368)
T 1xcg_A          254 IHEGPLTWRIS-KDKTLDLHVLLL--EDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSV---ATDK  327 (368)
T ss_dssp             EEEEEEEECCS-SSCCCEEEEEEE--SSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEEC---SSCS
T ss_pred             EeecceEeeec-CCCeeEEEEEcc--cccHHHhhcccccceeeeccccccCCCCcccCcCCceEccceeeecc---cCCC
Confidence            56888886543 356889999999  888887765 321                  1267889888753211   2556


Q ss_pred             ceeEEEEeec-CceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         119 HSLQLTFMKD-GSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       119 ~~~~i~~~~~-~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      ++|.+..... ++.+.|.|+|.|.++...|+.+|+.+.
T Consensus       328 ~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai  365 (368)
T 1xcg_A          328 RAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAV  365 (368)
T ss_dssp             SEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHH
Confidence            7887654332 445889999999999999999998764

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A

Probab=96.69  E-value=0.034  Score=56.48  Aligned_cols=96  Identities=18%  Similarity=0.251  Sum_probs=68.7

Q ss_pred             cceEEEEEEeCCCC-CCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC--
Q psy9639         179 FGREGWLWKTGPKN-ADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ--  255 (321)
Q Consensus       179 ~~k~G~L~K~g~~~-~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~--  255 (321)
                      ++..|||....... .++=|.-||||+...|.+|+++.....+-.++|    .+..++... .+...+++.|.|..++  
T Consensus       540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~  614 (772)
T 3zvr_A          540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSV----DNLKLRDVE-KGFMSSKHIFALFNTEQR  614 (772)
T ss_dssp             EEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTTCCCEEEEEEC----TTEEEEEC--------CEEEEEEETTSS
T ss_pred             ceeeeeeeecccccccCCCccceeeccccccccccchhhhcccccccc----cccccchhh-hccccccccccccCCccc
Confidence            78899999754322 246788999999999999999877777778888    345555433 3434567889998652  


Q ss_pred             ------eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         256 ------RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       256 ------r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                            +..-|+|++.++.+.|...+-.|-
T Consensus       615 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  644 (772)
T 3zvr_A          615 NVYKDYRQLELACETQEEVDSWKASFLRAG  644 (772)
T ss_dssp             CSBTTBSEEEEEESSHHHHHHHHHHHHHTT
T ss_pred             cccchhhhhhhhccccccchhhHHhhhhcc
Confidence                  678899999999999999986554

>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A

Probab=96.65  E-value=0.021  Score=53.19  Aligned_cols=94  Identities=13%  Similarity=0.133  Sum_probs=63.4

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCC------------------CceeEEeccceEEEeccCCCCCC
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKK------------------EPKATLRISELNVVIAPSKIEHP  118 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~------------------~pkg~I~l~~~~~~~~~~~~~~~  118 (321)
                      .++|.|..+... +..+.|++.|.  ++.|.+-+. +++                  ..++.|+|.++.+. .+. ....
T Consensus       258 i~eG~l~~~~~~-~~~~~~~~fLF--~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~-~~~-~d~~  332 (385)
T 1txd_A          258 IHEGPLVWKVNR-DKTIDLYTLLL--EDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVR-QVA-TDNK  332 (385)
T ss_dssp             EEEEEEEEESSS-SCBCCEEEEEE--SSEEEEEEEETTEEECCC-------------CCCSEEEGGGEEEE-ECC-C-CC
T ss_pred             EEECcEEEEcCC-CCeEEEEEEec--CCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceeccccccc-ccc-cCCc
Confidence            578888765432 45789999999  888877655 321                  23578899887442 211 1122


Q ss_pred             ceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       119 ~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      +.|.+. ...++.+.|.|+|.|.++...|+++|+.+...
T Consensus       333 ~~f~i~-~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~  370 (385)
T 1txd_A          333 ALFVIS-MSDNGAQIYELVAQTVSEKTVWQDLICRMAAS  370 (385)
T ss_dssp             EEEEEE-ECSSCEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEE-EcCCCceEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence            334443 33445788999999999999999999887554

>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A

Probab=96.64  E-value=0.0097  Score=55.27  Aligned_cols=93  Identities=14%  Similarity=0.145  Sum_probs=65.8

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCC------------------CceeEEeccceEEEeccCCCCCC
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKK------------------EPKATLRISELNVVIAPSKIEHP  118 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~------------------~pkg~I~l~~~~~~~~~~~~~~~  118 (321)
                      .++|.|..++.. +.++.|+|.|.  ++.|.|-+. +++                  ...+.|+|..+.+.  . ..+.+
T Consensus       260 i~eG~l~~~~~~-~~~~~~~~fLF--~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~--e-~~~~~  333 (377)
T 3p6a_A          260 VHEGPLTWRVTK-DKAVEVHVLLL--DDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTR--E-VATDH  333 (377)
T ss_dssp             EEEEEEEEESSS-SCEEEEEEEEE--SSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGGEEEE--E-CTTCT
T ss_pred             EEECCcEEEecC-CCeEEEEEEee--CCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechhhhcc--c-ccccc
Confidence            678999665543 47899999999  888888765 321                  01236888887432  1 23445


Q ss_pred             ceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       119 ~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      .+|.+.+...++.+.|-|.|.|.++...|+..|+.+.-
T Consensus       334 ~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~  371 (377)
T 3p6a_A          334 KAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAG  371 (377)
T ss_dssp             TEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             ceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHH
Confidence            56666555445668888999999999999999998754

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A

Probab=96.59  E-value=0.0083  Score=59.35  Aligned_cols=96  Identities=14%  Similarity=0.124  Sum_probs=70.1

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC--CCCCceeEEeccceEEEeccCC----CCCCceeEEEEeecCce
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK--EKKEPKATLRISELNVVIAPSK----IEHPHSLQLTFMKDGST  131 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~--~~~~pkg~I~l~~~~~~~~~~~----~~~~~~~~i~~~~~~~~  131 (321)
                      .++|.|.+.....+..+.|++.|.  ++.|.|-+.  ..-..++.|+|.++.+.-.+..    ...+++|.|...  .+.
T Consensus       407 l~~G~l~~~~~~~~~~~~r~~fLF--~d~Ll~~k~~~~~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~--~~~  482 (587)
T 3ky9_A          407 KIDGELKITSVERRSKMDRYAFLL--DKALLICKRRGDSYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIED--QGA  482 (587)
T ss_dssp             EEEEEEEEECSSCCSCEEEEEEEE--TTEEEEEEEETTEEEEEEEEEGGGEEEEEC-----CCCTTCEEEEEEET--TC-
T ss_pred             EEEeeEEEEeccCCCcceEEEEEE--CCEEEEEEecCCEEEeeeeechhhceeeecCCCCcccccccceeEEEEc--CCC
Confidence            578999887777788999999999  899988876  3345789999999865433221    124577877532  234


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      +.|.|+|.|.++...|+++|+.+.-.
T Consensus       483 ~~~~L~A~S~eeK~~Wi~~I~~ai~~  508 (587)
T 3ky9_A          483 QGYELFFKTRELKKKWMEQFEMAISN  508 (587)
T ss_dssp             --CEEEESSHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEeCCHHHHHHHHHHHHHHhhh
Confidence            78999999999999999999987643

>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A

Probab=96.38  E-value=0.038  Score=50.93  Aligned_cols=79  Identities=14%  Similarity=0.261  Sum_probs=58.8

Q ss_pred             CceeeEEEEeccCCeEEeecC-CCC----------CceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEEeCC
Q psy9639          72 KYHPRRFVLNEINDTIKYYVK-EKK----------EPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEE  140 (321)
Q Consensus        72 ~wk~R~fvL~~~~~~L~Yy~~-~~~----------~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s  140 (321)
                      ..+.|++.|.  ++.|.|-+. ...          ..++.|+|.++.+.-.  ..|.+++|.|.+  .+..+.|.|+|.|
T Consensus       236 k~~~r~~fLF--~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~--~~~~~~~F~i~~--~~~~~~~~l~a~s  309 (353)
T 1kz7_A          236 KPMQRHLFLH--EKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITEN--VKGDTKKFEIWY--NAREEVYIIQAPT  309 (353)
T ss_dssp             SCEEEEEEEE--SSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECC--BTTBTTEEEEEE--TTTTEEEEEECSS
T ss_pred             CcceeEEEEE--CCEEEEEEeccccccCCCCCCeEEEEEEeEcccceeeEc--CCCCCceEEEEE--CCCCcEEEEECCC
Confidence            4688999999  888888776 321          2367888888854321  235678888864  3446889999999


Q ss_pred             hHHHHHHHHHHHhhhh
Q psy9639         141 SQSIMNWYHAIRNAKF  156 (321)
Q Consensus       141 ~~e~~~W~~aLr~a~~  156 (321)
                      .++...|+.+|+.+..
T Consensus       310 ~~ek~~W~~~i~~ai~  325 (353)
T 1kz7_A          310 PEIKAAWVNAIRKVLT  325 (353)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999987754

>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A

Probab=96.38  E-value=0.02  Score=56.04  Aligned_cols=94  Identities=14%  Similarity=0.135  Sum_probs=64.3

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCC------------------CceeEEeccceEEEeccCCCCCC
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKK------------------EPKATLRISELNVVIAPSKIEHP  118 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~------------------~pkg~I~l~~~~~~~~~~~~~~~  118 (321)
                      .++|.|.+++.. +.++.|+|.|.  ++.|.|-+. .++                  .....|+|.++.+.-   ..+.+
T Consensus       413 I~eG~l~~~~~~-~k~~~r~~fLF--~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e---~~~d~  486 (536)
T 3odw_A          413 VHEGPLTWRVTK-DKAVEVHVLLL--DDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTRE---VATDH  486 (536)
T ss_dssp             EEEEEEEEESCC----CEEEEEEE--SSEEEEEEEETTEEECCCC------------CCCSEEEGGGEEEEE---CTTCT
T ss_pred             eeecceEEEecC-CCeeEEEEEEc--CCEEEEEEEcCCeEEEeecccccccccccccccCceeecccceeec---ccccC
Confidence            678999776643 46889999999  888887765 321                  123468888884321   23456


Q ss_pred             ceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       119 ~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      .+|.+.+......+.|.|.|.|.++...|+..|+.+...
T Consensus       487 ~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~  525 (536)
T 3odw_A          487 KAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGS  525 (536)
T ss_dssp             TEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHh
Confidence            677766554445688999999999999999999988654

>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A

Probab=96.25  E-value=0.036  Score=50.05  Aligned_cols=82  Identities=20%  Similarity=0.186  Sum_probs=59.8

Q ss_pred             CCceeeEEEEeccCCeEEeecC-CCC------CceeEEeccceEEEeccCCCCCCceeEEEEee-cCceEEEEEEeCChH
Q psy9639          71 GKYHPRRFVLNEINDTIKYYVK-EKK------EPKATLRISELNVVIAPSKIEHPHSLQLTFMK-DGSTRHIYVYHEESQ  142 (321)
Q Consensus        71 ~~wk~R~fvL~~~~~~L~Yy~~-~~~------~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~-~~~~R~~~l~a~s~~  142 (321)
                      +..+.|+|.|.  ++.|.|-+. .+.      ..++.|+|+++.++-.  ..+.+++|.|.+.. .++...+.|+|.|.+
T Consensus       219 ~~~~~r~~fLF--~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~~v~e~--~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~  294 (311)
T 1nty_A          219 RKGRERHLFLF--EMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEH--VEGDPCKFALWVGRTPTSDNKIVLKASSIE  294 (311)
T ss_dssp             CCEEEEEEEEE--SSEEEEEEEEECTTCCEEEEEEEEEEGGGEEEECC--CTTCTTEEEEEESSSCCTTTCEEEECSSHH
T ss_pred             cccceeEEEec--cCeEEEEEeeccCCCCceeEEeeeeeccceeeEEc--cCCCCceEEEEeCCCCCCCceEEEECCCHH
Confidence            45689999999  888888765 321      3478899998855322  23567888886522 234567889999999


Q ss_pred             HHHHHHHHHHhhhh
Q psy9639         143 SIMNWYHAIRNAKF  156 (321)
Q Consensus       143 e~~~W~~aLr~a~~  156 (321)
                      +...|+.+|+.+..
T Consensus       295 ek~~W~~~i~~~i~  308 (311)
T 1nty_A          295 NKQDWIKHIREVIQ  308 (311)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999987754

>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}

Probab=95.84  E-value=0.088  Score=48.46  Aligned_cols=82  Identities=15%  Similarity=0.153  Sum_probs=60.5

Q ss_pred             CCceeeEEEEeccCCeEEeecC-CC---------CCceeEEeccceEEEeccCCCCCCceeEEEEee-cCceEEEEEEeC
Q psy9639          71 GKYHPRRFVLNEINDTIKYYVK-EK---------KEPKATLRISELNVVIAPSKIEHPHSLQLTFMK-DGSTRHIYVYHE  139 (321)
Q Consensus        71 ~~wk~R~fvL~~~~~~L~Yy~~-~~---------~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~-~~~~R~~~l~a~  139 (321)
                      +..+.|++.|.  ++.|.|-+. .+         -..++.|+|.++.+.-.  ..+.+++|.|.+.. .++...|.|+|.
T Consensus       226 ~~~~~r~~fLF--~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~--~~~~~~~F~i~~~~~~~~~~~~~l~a~  301 (354)
T 2rgn_B          226 SRGRERRVFLF--EQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGN--LQGDPCRFALTSRGPEGGIQRYVLQAA  301 (354)
T ss_dssp             CCCCEEEEEEE--SSEEEEEEECC--------CCEEEEEEEEGGGEEEEES--GGGCTTEEEEEEECSSSCEEEEEEEES
T ss_pred             CCCceEEEEEe--CCcEEEEEeccCCCCCCCCCceEEcceeeccceeeeec--cCCCCceEEEEecCCCCCceEEEEECC
Confidence            45788999999  888888765 32         13467889988854322  23567899987643 234688999999


Q ss_pred             ChHHHHHHHHHHHhhhh
Q psy9639         140 ESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       140 s~~e~~~W~~aLr~a~~  156 (321)
                      |.++...|+.+|+.+..
T Consensus       302 s~~ek~~W~~~i~~ai~  318 (354)
T 2rgn_B          302 DPAISQAWIKHVAQILE  318 (354)
T ss_dssp             SHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHH
Confidence            99999999999987754

>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B

Probab=95.72  E-value=0.0017  Score=62.83  Aligned_cols=90  Identities=14%  Similarity=0.111  Sum_probs=0.0

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCC-------------------CceeEEeccceEEEeccCCCCC
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKK-------------------EPKATLRISELNVVIAPSKIEH  117 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~-------------------~pkg~I~l~~~~~~~~~~~~~~  117 (321)
                      .++|.|.|.    +..+.|+|.|.  ++.|.|-+. ...                   ..++.|+|.++.+.-..+..+.
T Consensus       254 i~eG~l~~~----~~~~~~~~fLF--~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v~~~~d~~~~  327 (510)
T 3jzy_A          254 LHSGKLYKT----KSNKELHGFLF--NDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPTDPSSD  327 (510)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             EEeceEEEc----CCCcEEEEEcc--cceeEEeeecccccccCCcccccCcccccceeEEcCceehhheEEeccCCCCcc
Confidence            456777665    34689999999  888888775 322                   1256677777744322222345


Q ss_pred             CceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         118 PHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       118 ~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      +++|.|    .+..++|.|+|.|.++...|++.|+.+...
T Consensus       328 ~~~F~i----~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~  363 (510)
T 3jzy_A          328 EPVFHI----SHIDRVYTLRTDNINERTAWVQKIKAASEQ  363 (510)
T ss_dssp             ----------------------------------------
T ss_pred             ccceee----eccceeEEeccCCHHHHHHHHHHHHHHHHH
Confidence            566655    345688999999999999999999877544

>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A

Probab=95.19  E-value=0.06  Score=56.89  Aligned_cols=91  Identities=14%  Similarity=0.242  Sum_probs=65.7

Q ss_pred             cceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC-----------CCceeEEeccceEEEeccCCCCCCceeEEE
Q psy9639          57 GHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK-----------KEPKATLRISELNVVIAPSKIEHPHSLQLT  124 (321)
Q Consensus        57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~-----------~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~  124 (321)
                      -.++|.|.+.++.    +.|++.|.  ++.|.|-+. ..           -..++.|+|.++.+.-.+...+.+++|.|.
T Consensus       444 Li~eG~l~~~~~k----~~r~~FLF--~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~~~~~~~F~I~  517 (1049)
T 3ksy_A          444 FIMEGTLTRVGAK----HERHIFLF--DGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEII  517 (1049)
T ss_dssp             CCCEEEEEETTCS----SCEEEEEE--TTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCSSSCCSEEEEC
T ss_pred             EEEeceEEEEccC----ceEEEEee--CCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCCccccceEEEE
Confidence            3679999988743    88999999  889988876 32           245788999888543222223445677663


Q ss_pred             EeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         125 FMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       125 ~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      .   .....|.|+|.|.++...|+.+|+.+..
T Consensus       518 ~---~~~~~~~L~A~S~eeK~~Wi~~I~~~q~  546 (1049)
T 3ksy_A          518 L---KDENSVIFSAKSAEEKNNWMAALISLQY  546 (1049)
T ss_dssp             C---TTSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             c---CCCCEEEEeCCCHHHHHHHHHHHHHHHH
Confidence            1   2225799999999999999999987653

>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}

Probab=94.60  E-value=0.085  Score=46.65  Aligned_cols=55  Identities=11%  Similarity=0.067  Sum_probs=35.0

Q ss_pred             ceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC--eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         220 KGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ--RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       220 ~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~--r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .+.|+|..    +.|..... .+..++++|+|..++  .+..|+|++.+++++|+.+|..+|
T Consensus       205 ~~~ipL~m----~~~tR~~~-~~d~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i  261 (263)
T 1z87_A          205 AKHVSLKM----AYVSRRCT-PTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQI  261 (263)
T ss_dssp             CEEEESSS----EEEEEECC-SSCSSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             ccccCcce----eeeeeecc-ccCCCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHh
Confidence            36777743    33333221 222367899999874  678877777777777777776665

>2crw_A ARF GAP 3, ADP-ribosylation factor GTPase-activating protein 3; arfgap domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.59  E-value=0.0042  Score=50.08  Aligned_cols=31  Identities=16%  Similarity=0.144  Sum_probs=23.4

Q ss_pred             CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcc
Q psy9639           1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREE   45 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~   45 (321)
                      |...||..||++||++.+.              +.+|+.||+.+.
T Consensus        86 m~~~GN~~an~~~e~~~~~--------------~~~i~~KY~s~~  116 (149)
T 2crw_A           86 MQVGGNASASSFFHQHGCS--------------TNDTNAKYNSRA  116 (149)
T ss_dssp             HHTTCHHHHHHHHHHHCCC--------------CCCHHHHTTSHH
T ss_pred             HHHHhhHHHHHHHHhcCCC--------------CcchhhCcCcHH
Confidence            5678999999999999764              124777876543

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A

Probab=94.30  E-value=0.39  Score=48.77  Aligned_cols=92  Identities=21%  Similarity=0.360  Sum_probs=62.7

Q ss_pred             cceeeEEEeecCC--CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEE-eccCCCCCCceeEEEEeecCc--
Q psy9639          57 GHMDGFLMKRGKE--SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVV-IAPSKIEHPHSLQLTFMKDGS--  130 (321)
Q Consensus        57 ~~~~G~L~K~g~~--~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~-~~~~~~~~~~~~~i~~~~~~~--  130 (321)
                      +...|||......  .++-+.-||||.  -..|.+|++ +.++-|-+++|.++..- ....-.+..+.|.+ |..+..  
T Consensus       540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  616 (772)
T 3zvr_A          540 VIRKGWLTINNIGIMKGGSKEYWFVLT--AENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFAL-FNTEQRNV  616 (772)
T ss_dssp             EEEEEEEEESSSCCC---CCEEEEEEE--SSEEEEESSTTCCCEEEEEECTTEEEEEC-------CEEEEE-EETTSSCS
T ss_pred             ceeeeeeeecccccccCCCccceeecc--ccccccccchhhhcccccccccccccchhhhccccccccccc-cCCccccc
Confidence            6788999974433  356788999999  899999999 78888889999877532 11111234455555 443332  


Q ss_pred             ---eEEEEEEeCChHHHHHHHHHH
Q psy9639         131 ---TRHIYVYHEESQSIMNWYHAI  151 (321)
Q Consensus       131 ---~R~~~l~a~s~~e~~~W~~aL  151 (321)
                         -|.+-+.+++.+++..|..++
T Consensus       617 ~~~~~~~~l~~~~~~~~~~~~~~~  640 (772)
T 3zvr_A          617 YKDYRQLELACETQEEVDSWKASF  640 (772)
T ss_dssp             BTTBSEEEEEESSHHHHHHHHHHH
T ss_pred             cchhhhhhhhccccccchhhHHhh
Confidence               256789999999999999875

>2owa_A Arfgap-like finger domain containing protein; zinc finger protein, cysteine-rich motif, GTPase activation; 2.00A {Cryptosporidium parvum iowa II}

Probab=94.06  E-value=0.014  Score=46.43  Aligned_cols=41  Identities=10%  Similarity=0.058  Sum_probs=29.4

Q ss_pred             CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcc
Q psy9639           1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREE   45 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~   45 (321)
                      |...||..||++||++.+..   |. .+...--+.||.+||..+.
T Consensus        92 m~~~GN~~an~~~e~~~~~~---~~-~~~~~kY~s~~a~~Y~~kL  132 (138)
T 2owa_A           92 MDIGGNGRARNYFKQVLGVN---FS-PKTKEYASSICGRQYKQIL  132 (138)
T ss_dssp             HHHCCHHHHHHHHHHHTCTT---CC-GGGCHHHHSHHHHHHHHHH
T ss_pred             HHhhccHHHHHHHHHHcCCC---CC-CCHHHHHhhHHHHHHHHHH
Confidence            56789999999999964432   22 2334556779999998763

>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1

Probab=93.71  E-value=0.8  Score=42.17  Aligned_cols=83  Identities=11%  Similarity=0.106  Sum_probs=53.4

Q ss_pred             CceeeEEEEeccCCeEEe-ecC-C-------------------CCCceeEEeccceEEEeccCCCCCCce-eEEEEee--
Q psy9639          72 KYHPRRFVLNEINDTIKY-YVK-E-------------------KKEPKATLRISELNVVIAPSKIEHPHS-LQLTFMK--  127 (321)
Q Consensus        72 ~wk~R~fvL~~~~~~L~Y-y~~-~-------------------~~~pkg~I~l~~~~~~~~~~~~~~~~~-~~i~~~~--  127 (321)
                      .-+.|++.|.  ++.|.+ .+. .                   .-..++.|+|.++.+.-.+...+..++ |.|....  
T Consensus       258 k~~~~~~fLF--~d~lll~~k~~~~~k~~~~~~~~~s~~~~~~~y~~k~~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~  335 (377)
T 1foe_A          258 KEPELAAFVF--KTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEALQVRALPSADAEANAVCEIVHVKSE  335 (377)
T ss_dssp             SSCEEEEEEE--TTEEEEEECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGGEEEECCCCTTTTSCCEEEEEECCBT
T ss_pred             ccceEEEEEc--CCeEEEEeccccccccccccccccccccCCCceeEeeeccccceEEEecCCCccchhhHHHHHhcccc
Confidence            4467898998  776655 332 1                   113467899998865433322222333 5554322  


Q ss_pred             --cCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         128 --DGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       128 --~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                        +.+.+.|.|+|.|.++...|+.+|+.+..
T Consensus       336 ~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~  366 (377)
T 1foe_A          336 SEGRPERVFHLCCSSPESRKDFLKSVHSILR  366 (377)
T ss_dssp             GGGBCCEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred             ccCCCcceEEEEeCCHHHHHHHHHHHHHHhh
Confidence              12358899999999999999999987643

>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1

Probab=93.43  E-value=0.2  Score=41.41  Aligned_cols=55  Identities=15%  Similarity=0.188  Sum_probs=34.3

Q ss_pred             ceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC--eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         220 KGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ--RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       220 ~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~--r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ...|+|.-+   |..+.....+  ..+.+|+|..++  .+-+|++.+..++++|.++|..+|
T Consensus       120 ~~~IPLkMa---yvtR~~~~tD--~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni  176 (178)
T 2adz_A          120 AKHVSLKMA---YVSRRCTPTD--PEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQI  176 (178)
T ss_dssp             CEEEETTTC---EEEEECCSSC--CSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred             ceeecHHHH---HHHHhccCCC--CCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhc
Confidence            457888542   4444433222  356799999875  677766666666666666666554

>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1

Probab=93.21  E-value=0.37  Score=37.18  Aligned_cols=92  Identities=15%  Similarity=0.198  Sum_probs=59.9

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCC-----CCCCcceeEEcccccCceEEecCCCCCCCCCCceEEE
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEP-----LSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTL  251 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~-----~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i  251 (321)
                      ...++.|.+.--.+.  +.=+.|++.|-...|.+-|..     ....-+..|.++.    +.|.+.. ..  +.+..|+|
T Consensus         8 G~Ll~q~~f~V~~~~--~k~~eR~vFLFe~~ilf~K~~~~~~~~~Y~~K~~ikl~~----~~lte~~-~~--~d~~kFei   78 (119)
T 1fho_A            8 GRIIRHDAFQVWEGD--EPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDK----YNIRQHT-TD--EDTIVLQP   78 (119)
T ss_dssp             CCSSEEEEEEECSTT--CSCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSS----CEEEEEC-TT--CCEEEEEC
T ss_pred             CCccccCceEEEeCC--CCcceEEEEEecCcEEEEEEecCCCCCcEEEeeEEeece----eEEEecC-CC--CCCcEEEE
Confidence            355778888766543  245679999999999888754     1123466787754    3454432 10  34566999


Q ss_pred             EeCC--eEEEE--EcCCHH-HHHHHHHHHhh
Q psy9639         252 KTPQ--RWYQF--SALSAP-DRDQWIQAVQT  277 (321)
Q Consensus       252 ~t~~--r~~~f--~A~s~~-e~~~Wv~aL~~  277 (321)
                      ..++  ..|.+  +|.|.+ ..+.|++.|++
T Consensus        79 w~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~  109 (119)
T 1fho_A           79 QEPGLPSFRIKPKDFETSEYVRKAWLRDIAE  109 (119)
T ss_dssp             CSTTCCCBCCCCCSSSSCSHHHHHHHHHHHT
T ss_pred             ccCCCCceEEEeeecCCcHHHHHHHHHHHHH
Confidence            8654  56676  777777 77777777776

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=92.92  E-value=0.84  Score=45.78  Aligned_cols=93  Identities=18%  Similarity=0.394  Sum_probs=61.9

Q ss_pred             ccceeeEEEeecCCC-CCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEE
Q psy9639          56 TGHMDGFLMKRGKES-GKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHI  134 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~-~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~  134 (321)
                      ...+.|++.|+|+-. ..|++|++.|.  .+.|..... ...|...+.+..+..+.. ..+...+.+.+.+   .+.+++
T Consensus       558 ~~i~~G~~~k~~g~f~~~~~rR~~~l~--p~r~e~~~e-~~~~~~l~~~~~v~~v~k-~~i~~~~~l~~~~---k~~k~f  630 (689)
T 3v5w_A          558 DCIMHGYMSKMGNPFLTQWQRRYFYLF--PNRLEWRGE-GEAPQSLLTMEEIQSVEE-TQIKERKCLLLKI---RGGKQF  630 (689)
T ss_dssp             CCCEEEEEEEC-------CEEEEEEEE--TTEEEEECT-TSCCCEEEEGGGEEEEEE-EESSSCEEEEEEE---TTTEEE
T ss_pred             cceeecccccCCCcccchhhhhccccC--CCccccccc-CCCCcceeeecccccccc-CcCCCCcceeeee---cCCcEE
Confidence            347899999998765 58999999998  677766654 334555677777755432 2233445555432   334889


Q ss_pred             EEEeCChHHHHHHHHHHHhhh
Q psy9639         135 YVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      ++.+.|..++.+|...|+.+-
T Consensus       631 ~~~t~~~~~~~~W~~~i~~~~  651 (689)
T 3v5w_A          631 ILQCDSDPELVQWKKELRDAY  651 (689)
T ss_dssp             EEECSSHHHHHHHHHHHHHHH
T ss_pred             EEECCChHHHHHHHHHHHHHH
Confidence            999999999999999998663

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=87.06  E-value=4  Score=41.69  Aligned_cols=92  Identities=10%  Similarity=0.096  Sum_probs=61.3

Q ss_pred             EEEeecCCCCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEec--cCC-------------CC------CCce
Q psy9639          62 FLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIA--PSK-------------IE------HPHS  120 (321)
Q Consensus        62 ~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~--~~~-------------~~------~~~~  120 (321)
                      .|.|-+...+..++|.|.|.+++..|.|..... +.+..|.|+++..+..  ..+             .|      ...+
T Consensus        27 ~~~K~~~~s~~~~~~~f~lD~d~~~L~W~~~~k-~~~~~l~I~~I~eVR~G~~t~~pk~~klr~~~~~~g~~~~~~e~r~  105 (816)
T 3qr0_A           27 KFLKWEEGSSGFIEILLRVDPKGYFLYWKIEGK-EDTQLLDLAYVRDIRCAKYAKPPKDKKIKEAGTNFGSSNIPLQDKC  105 (816)
T ss_dssp             EEEEECTTCCCCEEEEEEECTTSCEEEECCTTC-SSCEEEEGGGEEEEEEGGGSCCCCSHHHHHHHHHSSCTTSCHHHHE
T ss_pred             eEEEECCCCCcceeEEEEEcCCCCEEEEeCCCC-CcCcEEEeeeeeeeecCCcCCCCccHHHHHHHHhcCCCcccccccE
Confidence            567777666656789999997666666654322 2247899999876642  100             12      2246


Q ss_pred             eEEEEeecC-ceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         121 LQLTFMKDG-STRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       121 ~~i~~~~~~-~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      |.|+|..+. +-..+.|.|.+.++...|+..|+..
T Consensus       106 fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L  140 (816)
T 3qr0_A          106 VTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSY  140 (816)
T ss_dssp             EEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHH
Confidence            778775432 2245599999999999999888764

>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A

Probab=85.38  E-value=7.5  Score=32.65  Aligned_cols=34  Identities=12%  Similarity=0.202  Sum_probs=27.2

Q ss_pred             ceEEEEeC-CeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         247 FTFTLKTP-QRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       247 ~~F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      ..|.|... +.++-|.|+|..+...|++.|+-=++
T Consensus       116 laFSii~~~~~~L~fvA~s~~~~~~W~DGL~~Llg  150 (203)
T 3a98_B          116 LAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALLG  150 (203)
T ss_dssp             GEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHTT
T ss_pred             eEEEEecCCCceEEEecCCHHHHHHHHHHHHHHhc
Confidence            68888854 57888899999999999888877554

>2p57_A GTPase-activating protein ZNF289; zinc finger, GAP, structural genomics, structural genomics consortium, SGC, metal binding protein; 1.80A {Homo sapiens}

Probab=82.95  E-value=0.24  Score=39.46  Aligned_cols=16  Identities=19%  Similarity=0.200  Sum_probs=14.4

Q ss_pred             CccccchHHHHhhhcc
Q psy9639           1 MKQIGNNVSKLKYEMR   16 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~   16 (321)
                      |...||..||++||++
T Consensus        94 m~~~GN~~an~~~e~~  109 (144)
T 2p57_A           94 MQVGGNANATAFFRQH  109 (144)
T ss_dssp             HHHCCHHHHHHHHHHT
T ss_pred             HHHhCHHHHHHHHHHc
Confidence            5678999999999998

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=82.85  E-value=8  Score=39.43  Aligned_cols=78  Identities=12%  Similarity=0.055  Sum_probs=49.8

Q ss_pred             ceEEEEEeC--CeeEeeeCCCCCCcceeEEcccccCceEEecCCCC----C-------------CCCCCceEEEEeCC--
Q psy9639         197 RKRWFTLDY--RKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP----G-------------AKDQGFTFTLKTPQ--  255 (321)
Q Consensus       197 kkRwfvL~~--~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~----~-------------~~~~~~~F~i~t~~--  255 (321)
                      +.|+|.|+.  ..|+|....   ...+.|.|..+.   .|+.+...    +             ......+|.|+...  
T Consensus        34 k~~~frLd~d~~~l~W~~~~---k~~~~l~I~~Ik---eIR~G~~s~~pk~~~~~e~~~~~~~~~~~e~~~fTIvyg~~~  107 (799)
T 2zkm_X           34 SPVILRVDPKGYYLYWTYQS---KEMEFLDITSIR---DTRFGKFAKMPKSQKLRDVFNMDFPDNSFLLKTLTVVSGPDM  107 (799)
T ss_dssp             EEEEEEECTTSCEEEEEETT---SCEEEEEGGGEE---EEEEGGGSCCCCSHHHHHHTTCSSTTCCGGGTEEEEEECSSS
T ss_pred             eEEEEEEcCCCCEEEEccCC---CcCceEeeeeeH---HhhcCCCCCCCchHHHHHHhcccCcccccccceEEEEECCCc
Confidence            568889973  345454322   225688887763   34543100    0             00124689999653  


Q ss_pred             ---eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         256 ---RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       256 ---r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                         ++..|.|+++++++.|+..|+.-+.
T Consensus       108 ~~l~~L~lvA~s~~ea~~Wv~GL~~L~~  135 (799)
T 2zkm_X          108 VDLTFHNFVSYKENVGKAWAEDVLALVK  135 (799)
T ss_dssp             SSCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred             cceeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence               3688999999999999999987654

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=82.53  E-value=11  Score=38.54  Aligned_cols=94  Identities=13%  Similarity=0.081  Sum_probs=57.8

Q ss_pred             eeeE-EEeecCCCCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEec--cCC------------CC------C
Q psy9639          59 MDGF-LMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIA--PSK------------IE------H  117 (321)
Q Consensus        59 ~~G~-L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~--~~~------------~~------~  117 (321)
                      ..|- |.|-.+....-++|.|.|.+++..|.|.... ++ ...|+|.++..+..  ...            .+      .
T Consensus        18 ~~Gt~~~K~~~~~~~~k~~~frLd~d~~~l~W~~~~-k~-~~~l~I~~IkeIR~G~~s~~pk~~~~~e~~~~~~~~~~~e   95 (799)
T 2zkm_X           18 SQGERFIKWDDETTVASPVILRVDPKGYYLYWTYQS-KE-MEFLDITSIRDTRFGKFAKMPKSQKLRDVFNMDFPDNSFL   95 (799)
T ss_dssp             HHCEEEEEECTTTCCEEEEEEEECTTSCEEEEEETT-SC-EEEEEGGGEEEEEEGGGSCCCCSHHHHHHTTCSSTTCCGG
T ss_pred             hCCCEEEEEcCCCcceeEEEEEEcCCCCEEEEccCC-Cc-CceEeeeeeHHhhcCCCCCCCchHHHHHHhcccCcccccc
Confidence            3444 4454433222367889998655566666432 22 46899999876542  000            11      2


Q ss_pred             CceeEEEEeecC-ceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         118 PHSLQLTFMKDG-STRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       118 ~~~~~i~~~~~~-~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      ..+|.|+|..+. +-..+.|.|.+.++...|+..|+..
T Consensus        96 ~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L  133 (799)
T 2zkm_X           96 LKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLAL  133 (799)
T ss_dssp             GTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHH
T ss_pred             cceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHH
Confidence            346777764432 1246899999999999999888653

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=81.50  E-value=7.4  Score=39.76  Aligned_cols=90  Identities=13%  Similarity=0.050  Sum_probs=56.2

Q ss_pred             EEEEeCCCCCCCcceEEEEEeC--CeeEeeeCCCCCCcceeEEcccccCceEEecCCCC----C---------CC-----
Q psy9639         184 WLWKTGPKNADAYRKRWFTLDY--RKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP----G---------AK-----  243 (321)
Q Consensus       184 ~L~K~g~~~~~~WkkRwfvL~~--~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~----~---------~~-----  243 (321)
                      .|.|-+... +..+.|.|.|+.  ..| |++++.. ..+..|.|..+   ..|+.+...    +         .+     
T Consensus        27 ~~~K~~~~s-~~~~~~~f~lD~d~~~L-~W~~~~k-~~~~~l~I~~I---~eVR~G~~t~~pk~~klr~~~~~~g~~~~~  100 (816)
T 3qr0_A           27 KFLKWEEGS-SGFIEILLRVDPKGYFL-YWKIEGK-EDTQLLDLAYV---RDIRCAKYAKPPKDKKIKEAGTNFGSSNIP  100 (816)
T ss_dssp             EEEEECTTC-CCCEEEEEEECTTSCEE-EECCTTC-SSCEEEEGGGE---EEEEEGGGSCCCCSHHHHHHHHHSSCTTSC
T ss_pred             eEEEECCCC-CcceeEEEEEcCCCCEE-EEeCCCC-CcCcEEEeeee---eeeecCCcCCCCccHHHHHHHHhcCCCccc
Confidence            455655544 344679999983  344 4444321 11367888766   335543211    1         00     


Q ss_pred             CCCceEEEEeCC-----eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         244 DQGFTFTLKTPQ-----RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       244 ~~~~~F~i~t~~-----r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ....+|+|+...     +...|.|++.++.+.|+..|+.-+
T Consensus       101 ~e~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~  141 (816)
T 3qr0_A          101 LQDKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYA  141 (816)
T ss_dssp             HHHHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             ccccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHH
Confidence            024789999753     455899999999999999998855

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=81.20  E-value=11  Score=38.88  Aligned_cols=92  Identities=10%  Similarity=0.037  Sum_probs=57.5

Q ss_pred             eEEEeecCCCCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEeccC--------------------CCCCCce
Q psy9639          61 GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPS--------------------KIEHPHS  120 (321)
Q Consensus        61 G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~~--------------------~~~~~~~  120 (321)
                      ..|.|-+...+.-+.+.|.|.+++..|.|....  .....+.|.++..+..-.                    ......+
T Consensus        25 t~f~K~~~~~~~~k~~~frLD~d~~~L~W~~~~--ke~~~l~Is~IkeIR~G~~a~~pKd~klr~~~~~~~~~~~~e~r~  102 (885)
T 3ohm_B           25 SKFIKWDEETSSRNLVTLRVDPNGFFLYWTGPN--MEVDTLDISSIRDTRTGRYARLPKDPKIREVLGFGGPDARLEEKL  102 (885)
T ss_dssp             EEEEEECTTCCSCCEEEEEECTTSCEEEEECGG--GCEEEEEGGGEEEEEETTTSCCCCSHHHHHCC---------CTTE
T ss_pred             CeEEEECCCCCCcEEEEEEECCCCCEEEEeCCC--CCCceEeeehhhhhhcCcCCCCCccHHHHHHhccCcccCcccccE
Confidence            356676655444577889999755555554432  123579999887654210                    0122456


Q ss_pred             eEEEEeecC-ceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         121 LQLTFMKDG-STRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       121 ~~i~~~~~~-~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      |.|+|..+. +-..+.|.|.+.++...|+..|+..
T Consensus       103 fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L  137 (885)
T 3ohm_B          103 MTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKL  137 (885)
T ss_dssp             EEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHH
T ss_pred             EEEEECCCCccceEEEEEeCChHHHHHHHHHHHHH
Confidence            777775432 1246899999999999998777653

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=80.69  E-value=11  Score=38.79  Aligned_cols=94  Identities=14%  Similarity=0.135  Sum_probs=56.0

Q ss_pred             eEE-EEEEeCCCCCCCcceEEEEEeC-CeeEeeeCCCCCCcceeEEcccccCceEEecCCC----CC-------------
Q psy9639         181 REG-WLWKTGPKNADAYRKRWFTLDY-RKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP----PG-------------  241 (321)
Q Consensus       181 k~G-~L~K~g~~~~~~WkkRwfvL~~-~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~----~~-------------  241 (321)
                      +.| .+.|-+... ..-+.+.|.|+. +...||.++.  .....|.|..+.   .|+.+..    ++             
T Consensus        22 ~~Gt~f~K~~~~~-~~~k~~~frLD~d~~~L~W~~~~--ke~~~l~Is~Ik---eIR~G~~a~~pKd~klr~~~~~~~~~   95 (885)
T 3ohm_B           22 RRGSKFIKWDEET-SSRNLVTLRVDPNGFFLYWTGPN--MEVDTLDISSIR---DTRTGRYARLPKDPKIREVLGFGGPD   95 (885)
T ss_dssp             HHCEEEEEECTTC-CSCCEEEEEECTTSCEEEEECGG--GCEEEEEGGGEE---EEEETTTSCCCCSHHHHHCC------
T ss_pred             hCCCeEEEECCCC-CCcEEEEEEECCCCCEEEEeCCC--CCCceEeeehhh---hhhcCcCCCCCccHHHHHHhccCccc
Confidence            344 445555442 234667888873 3333555432  223468887653   3444321    00             


Q ss_pred             CCCCCceEEEEeCC-----eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         242 AKDQGFTFTLKTPQ-----RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       242 ~~~~~~~F~i~t~~-----r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      ......+|.|+...     .+..|.|++.++.+.|+..|+.-+.
T Consensus        96 ~~~e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~  139 (885)
T 3ohm_B           96 ARLEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAM  139 (885)
T ss_dssp             ---CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred             CcccccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHh
Confidence            11235789999753     3689999999999999999988543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	321
d1u5ea1	209	b.55.1.1 (A:14-222) Src-associated adaptor protein	2e-19
d1u5ea1	209	b.55.1.1 (A:14-222) Src-associated adaptor protein	0.001
d1eaza_	103	b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId:	2e-14
d1eaza_	103	b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId:	1e-05
d1v88a_	130	b.55.1.1 (A:) Oxysterol binding protein-related pr	4e-13
d1fgya_	127	b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 1	6e-13
d1fgya_	127	b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 1	3e-04
d1faoa_	100	b.55.1.1 (A:) Dual adaptor of phosphotyrosine and	2e-12
d1faoa_	100	b.55.1.1 (A:) Dual adaptor of phosphotyrosine and	6e-05
d1v89a_	118	b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KI	1e-11
d1v89a_	118	b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KI	4e-04
d1v5pa_	126	b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId:	2e-11
d1v5pa_	126	b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId:	2e-05
d1plsa_	113	b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [Ta	2e-11
d1plsa_	113	b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [Ta	7e-05
d1btka_	169	b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Hom	3e-11
d2coda1	102	b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo	3e-11
d1x1ga1	116	b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapie	7e-11
d1x1ga1	116	b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapie	3e-05
d1u5da1	106	b.55.1.1 (A:108-213) Src kinase-associated phospho	9e-11
d1u5da1	106	b.55.1.1 (A:108-213) Src kinase-associated phospho	0.004
d1upqa_	107	b.55.1.1 (A:) Phosphoinositol 3-phosphate binding	2e-10
d1upqa_	107	b.55.1.1 (A:) Phosphoinositol 3-phosphate binding	1e-04
d2coaa1	112	b.55.1.1 (A:8-119) Protein kinase c, d2 type {Huma	2e-10
d1v5ua_	117	b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (M	3e-10
d1v5ua_	117	b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (M	7e-05
d1u5fa1	111	b.55.1.1 (A:109-219) Src-associated adaptor protei	4e-10
d2i5fa1	104	b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapie	7e-10
d2i5fa1	104	b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapie	2e-06
d1wi1a_	126	b.55.1.1 (A:) Calcium-dependent activator protein	1e-08
d1wi1a_	126	b.55.1.1 (A:) Calcium-dependent activator protein	5e-04
d1droa_	122	b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila	3e-08
d1w1ha_	147	b.55.1.1 (A:) 3-phosphoinositide dependent protein	5e-08
d2coca1	99	b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain cont	7e-08
d2coca1	99	b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain cont	8e-05
d1omwa2	119	b.55.1.1 (A:550-668) G-protein coupled receptor ki	7e-08
d1unqa_	118	b.55.1.1 (A:) Rac-alpha serine/threonine kinase {H	7e-08
d1unqa_	118	b.55.1.1 (A:) Rac-alpha serine/threonine kinase {H	1e-06
d1wgqa_	109	b.55.1.1 (A:) FYVE, RhoGEF and PH domain containin	2e-07
d1wgqa_	109	b.55.1.1 (A:) FYVE, RhoGEF and PH domain containin	0.003
d2j59m1	133	b.55.1.1 (M:931-1063) Rho GTPase-activating protei	2e-07
d2fjla1	101	b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phosph	3e-07
d2fjla1	101	b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phosph	5e-04
d1wjma_	123	b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens),	7e-07
d1v5ma_	136	b.55.1.1 (A:) SH2 and PH domain-containing adapter	7e-07
d1x1fa1	136	b.55.1.1 (A:8-143) Signal-transducing adaptor prot	2e-06
d1btna_	106	b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus),	3e-06
d1dcqa2	122	g.45.1.1 (A:247-368) Pyk2-associated protein beta	4e-06
d2elba2	101	b.55.1.1 (A:274-374) DCC-interacting protein 13-al	6e-06
d2dyna_	111	b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId	1e-05
d1qqga1	103	b.55.1.2 (A:12-114) Insulin receptor substrate 1,	8e-05
d2cofa1	95	b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens)	1e-04
d1wg7a_	150	b.55.1.1 (A:) Dedicator of cytokinesis protein 9,	1e-04

>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 209

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 83.1 bits (204), Expect = 2e-19
 Identities = 33/207 (15%), Positives = 69/207 (33%), Gaps = 14/207 (6%)

Query: 77  RFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY 135
           R +L ++   +   +K E    KA  +   L   I   K  +    Q     +    +  
Sbjct: 5   RNLLADVETFVADTLKGENLSKKAKEKRESLIKKIKDVKSVYLQEFQDKGDAEDGDEY-- 62

Query: 136 VYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDS-ELVKLLTRDFGREGWLWKTGPKNA- 193
              ++  +      ++ + ++ +        N    +         + G+L K    ++ 
Sbjct: 63  ---DDPFAGPADTISLASERYDKDDDGPSDGNQFPPIAAQDLPFVIKAGYLEKRRKDHSF 119

Query: 194 --DAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTL 251
               ++KRW  L      Y+        KGE  +                   +   F +
Sbjct: 120 LGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDV---RMNNTLRKDGKKDCCFEI 176

Query: 252 KTP-QRWYQFSALSAPDRDQWIQAVQT 277
             P +R YQF+A S  D ++W+Q ++ 
Sbjct: 177 CAPDKRIYQFTAASPKDAEEWVQQLKF 203

>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 209

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.2 bits (85), Expect = 0.001
 Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 7/99 (7%)

Query: 61  GFLMKRGKESG----KYHPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNVVIAPSKI 115
           G+L KR K+      ++  R   L+       YY  +K K+ K    I   +V +  +  
Sbjct: 108 GYLEKRRKDHSFLGFEWQKRWCALS--KTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLR 165

Query: 116 EHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154
           +         +     R         +    W   ++  
Sbjct: 166 KDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFI 204

>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 2e-14
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 4/97 (4%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           + G+  K G      +++R+F LD   + Y +  L   P   I L         +     
Sbjct: 5   KAGYCVKQGAVMK-NWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECK---QS 60

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
               +   F + T  R +   A S  +   WI+AV  
Sbjct: 61  DIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSG 97

>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 1e-05
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 2/94 (2%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHS 120
           G+ +K+G     +  R F L+   +TI Y+  E ++    +   +    +   K      
Sbjct: 7   GYCVKQGAVMKNWKRRYFQLD--ENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMM 64

Query: 121 LQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154
               F    ++R  YV  +  + + +W  A+  A
Sbjct: 65  RDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGA 98

>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.4 bits (153), Expect = 4e-13
 Identities = 24/133 (18%), Positives = 41/133 (30%), Gaps = 17/133 (12%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
              WL   G   +  + K W  L    L+ ++   +    G + L  C         +  
Sbjct: 10  MADWLKIRGTLKS--WTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNACEI-------IER 60

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDR 300
            +K  GF F L  P     ++                  + T   P  +    A S  D 
Sbjct: 61  PSKKDGFCFKLFHPLEQSIWAVKGPKGEAV--------GSITQPLPSSYLIIRATSESDG 112

Query: 301 DQWIQAVQTVLDT 313
             W+ A++  L +
Sbjct: 113 RCWMDALELALKS 125

>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 127

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Grp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.6 bits (151), Expect = 6e-13
 Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 18/132 (13%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           REGWL K G +    +++RWF L    L Y E      P+G I L + S           
Sbjct: 7   REGWLLKLGGRVK-TWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSI-------REV 58

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDR 300
               +   F L  P    Q       +               ++     Y+ SA S  ++
Sbjct: 59  LDPRKPNCFELYNPSHKGQVIKACKTEA----------DGRVVEGNHVVYRISAPSPEEK 108

Query: 301 DQWIQAVQTVLD 312
           ++W+++++  + 
Sbjct: 109 EEWMKSIKASIS 120

>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 127

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Grp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.9 bits (87), Expect = 3e-04
 Identities = 17/113 (15%), Positives = 40/113 (35%), Gaps = 22/113 (19%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNVVIAPSKIEHPH 119
           G+L+K G     +  R F+L   ++ + Y+     KEP+  + +  L++         P+
Sbjct: 9   GWLLKLGGRVKTWKRRWFILT--DNCLYYFEYTTDKEPRGIIPLENLSIREVLDP-RKPN 65

Query: 120 SLQLT------------------FMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154
             +L                    + +G+     +     +    W  +I+ +
Sbjct: 66  CFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKAS 118

>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.5 bits (146), Expect = 2e-12
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 7/97 (7%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           +EG+L K G      ++ RWFTL   +L Y ++ +S  P   + L  CS           
Sbjct: 6   KEGYLTKQGGLVK-TWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQ------FD 58

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
            ++++   F L  P R +   A +  + D+WI+ ++ 
Sbjct: 59  YSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRW 95

>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 6e-05
 Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 7/95 (7%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKK-EPKATLRISELNVVIAPSKIEHPH 119
           G+L K+G     +  R F L+   + +KY+  +   EP   L ++E + V      E  +
Sbjct: 8   GYLTKQGGLVKTWKTRWFTLH--RNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVN 65

Query: 120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154
                F      R  Y+  +       W   +R  
Sbjct: 66  ----CFCLVFPFRTFYLCAKTGVEADEWIKILRWK 96

>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho-GTPase-activating protein 25 (KIAA0053)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.8 bits (141), Expect = 1e-11
 Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 13/104 (12%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           + GWL K        +++R+F L  ++L Y+++     P+G +       G T++     
Sbjct: 10  KMGWLKKQRSIV-KNWQQRYFVLRAQQLYYYKDEEDTKPQGCM----YLPGCTIKEIATN 64

Query: 241 GAKDQGFTFTL--------KTPQRWYQFSALSAPDRDQWIQAVQ 276
             +   F F +        +  Q  Y   A S  + ++W++ ++
Sbjct: 65  PEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLR 108

>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho-GTPase-activating protein 25 (KIAA0053)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 4e-04
 Identities = 15/104 (14%), Positives = 28/104 (26%), Gaps = 11/104 (10%)

Query: 59  MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHP 118
             G+L K+      +  R FVL        YY K++++ K    +      I        
Sbjct: 10  KMGWLKKQRSIVKNWQQRYFVL---RAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPE 66

Query: 119 HSLQLTFM--------KDGSTRHIYVYHEESQSIMNWYHAIRNA 154
            + +  F                  +       +  W   +R  
Sbjct: 67  EAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRV 110

>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 126

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.9 bits (141), Expect = 2e-11
 Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 4/112 (3%)

Query: 169 SELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRK--LMYHEEPLSAYPKGEIFLG 226
           S  +  + R     G+L     +N+  + +R+F LD +   L+++ +       G   +G
Sbjct: 5   SSGMPYVDRQNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVG 64

Query: 227 HCSDGY--TVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
                Y   V +  P       F F +    + Y   A    D   W++A+ 
Sbjct: 65  SLQLTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALN 116

>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 126

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.2 bits (95), Expect = 2e-05
 Identities = 17/104 (16%), Positives = 37/104 (35%), Gaps = 6/104 (5%)

Query: 57  GHMDGFLMKRGKE-SGKYHPRRFVLNEI-NDTIKYYVKEKKEPKATLRISELNVVIAPS- 113
             + GFL     E SGK+  R F+L+   N  + Y    +        +  L +      
Sbjct: 15  NRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKV 74

Query: 114 ---KIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154
                +        F+ +  ++  ++   + + + +W  A+  A
Sbjct: 75  SIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQA 118

>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 2e-11
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 5/96 (5%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           REG+L K G    + ++  W  L    + ++++     PKG I L     G T+      
Sbjct: 7   REGYLVKKG-SVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPL----KGSTLTSPCQD 61

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
             K         T Q+ + F A    +RD W++ + 
Sbjct: 62  FGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDIN 97

>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 7e-05
 Identities = 13/94 (13%), Positives = 29/94 (30%), Gaps = 3/94 (3%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHS 120
           G+L+K+G     + P   VL    +    + K+K +      I      +     +    
Sbjct: 9   GYLVKKGSVFNTWKPMWVVL---LEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKR 65

Query: 121 LQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154
           + +  +     +  +      +    W   I  A
Sbjct: 66  MFVFKITTTKQQDHFFQAAFLEERDAWVRDINKA 99

>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 169

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 3e-11
 Identities = 20/137 (14%), Positives = 40/137 (29%), Gaps = 20/137 (14%)

Query: 182 EGWLWKTGPKN----ADAYRKRWFTLDYRKLMYHEEPLSAY----PKGEIFLGHCSDGYT 233
           E    K   +        ++K  F L   KL Y+E           KG I +   +    
Sbjct: 6   ESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITC--- 62

Query: 234 VRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFS 293
                     +         P+R        + + +Q     +  + F +   +      
Sbjct: 63  ---------VETVVPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVF 113

Query: 294 ALSAPDRDQWIQAVQTV 310
           + +   R +WI  ++ V
Sbjct: 114 SPTEELRKRWIHQLKNV 130

>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Centaurin-delta 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (137), Expect = 3e-11
 Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 10/97 (10%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           + GWL K  P+    ++KRW   D   + Y+      Y KG I L   S           
Sbjct: 3   KSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVR-------- 54

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
                   F + T QR + F      +R+ WI  +  
Sbjct: 55  --VQGDNKFEVVTTQRTFVFRVEKEEERNDWISILLN 89

>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 116

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 7e-11
 Identities = 24/108 (22%), Positives = 36/108 (33%), Gaps = 7/108 (6%)

Query: 175 LTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYH---EEPLSAYPKGEIFLGHCSDG 231
           L+    ++G+L K G K    ++ R F L       H          P G   L      
Sbjct: 7   LSGTVVKQGYLAKQGHKRK-NWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVS 65

Query: 232 YTVRLGVPP---GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
                GVP    G         +      Y   A S  +R +WI+A++
Sbjct: 66  ALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIK 113

>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 116

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 3e-05
 Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 7/101 (6%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVI-------APS 113
           G+L K+G +   +  RRFVL +    + YY   K+E +     S    ++        P+
Sbjct: 15  GYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPT 74

Query: 114 KIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154
            ++      L  +      H Y+          W  AI+  
Sbjct: 75  GVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKL 115

>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src kinase-associated phosphoprotein SKAP55 (SCAP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 9e-11
 Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 5/99 (5%)

Query: 181 REGWLWKTGPKNAD---AYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLG 237
           ++G+L K    ++     ++KRW  +      Y+    S  PKG   +   S        
Sbjct: 3   KQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPH-- 60

Query: 238 VPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
           +   +K +         +R Y+F+A S  +   W+  + 
Sbjct: 61  LRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQIS 99

>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src kinase-associated phosphoprotein SKAP55 (SCAP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (77), Expect = 0.004
 Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 61  GFLMKRGKESG----KYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIE 116
           G+L K+ K+      ++  R  V++       Y  ++ K+PK T  I   +V +AP    
Sbjct: 5   GYLEKKSKDHSFFGSEWQKRWCVVSR-GLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRR 63

Query: 117 HPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154
                    +     R             +W   I   
Sbjct: 64  DSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFL 101

>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositol 3-phosphate binding protein-1, PEPP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (131), Expect = 2e-10
 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 5/97 (5%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
             GWL K        +++RWF L    L Y+++       G + L   +         P 
Sbjct: 11  IRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPD----GPG 66

Query: 241 GAKDQGFTFTLKTPQRW-YQFSALSAPDRDQWIQAVQ 276
             + + FTFT + P    Y  +A +  D   W++A+ 
Sbjct: 67  APRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALG 103

>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositol 3-phosphate binding protein-1, PEPP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 1e-04
 Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 58  HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEH 117
           H+ G+L K+     +   RR+    ++    +Y K+ +E      +   +  I P     
Sbjct: 10  HIRGWLHKQDSSGLRLWKRRWF--VLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPGA 67

Query: 118 PHSLQLTFMKDGSTRHIYVYHEESQSIMN-WYHAIRNA 154
           P   + TF  +      YV   ++   +  W  A+  A
Sbjct: 68  PRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRA 105

>d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]} Length = 112

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Protein kinase c, d2 type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (131), Expect = 2e-10
 Identities = 18/131 (13%), Positives = 33/131 (25%), Gaps = 22/131 (16%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           REGW+     K+    ++ ++ LD + +   +   +     EI L       + +     
Sbjct: 3   REGWVVHYSNKD-TLRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLV 61

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDR 300
                   F + T    Y                                  S   A   
Sbjct: 62  PPGTNPHCFEIVTANATYFVGE---------------------MPGGTPGGPSGQGAEAA 100

Query: 301 DQWIQAVQTVL 311
             W  A++  L
Sbjct: 101 RGWETAIRQAL 111

>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 117

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SET binding factor 1, Sbf1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.6 bits (130), Expect = 3e-10
 Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 4/99 (4%)

Query: 182 EGWLWKTGPKNADAYRKRWFTLDYRK--LMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
           EG L+K G      ++ RWF LD  K  L Y++  +    KG I L            + 
Sbjct: 11  EGILYKKGAFMK-PWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIG 69

Query: 240 PGAKDQGFTFTLKTPQRW-YQFSALSAPDRDQWIQAVQT 277
                    F      R  Y F A   P   QW+  +Q+
Sbjct: 70  APKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQS 108

>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 117

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SET binding factor 1, Sbf1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.6 bits (91), Expect = 7e-05
 Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 4/100 (4%)

Query: 59  MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKE-KKEPKATLRISELNVVIAPSKIEH 117
            +G L K+G     +  R FVL++    ++YY      E K  + ++E+  V   +    
Sbjct: 10  YEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIG 69

Query: 118 PHS---LQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154
                  +  F    + R      ++  S   W   I++ 
Sbjct: 70  APKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSC 109

>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 111

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.2 bits (129), Expect = 4e-10
 Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 181 REGWLWKTGPKNA---DAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLG 237
           + G+L K    ++     ++KRW  L      Y+        KGE  +          L 
Sbjct: 11  KAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLR 70

Query: 238 VPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
                K           +R YQF+A S  D ++W+Q ++
Sbjct: 71  KDG--KKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLK 107

>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 7e-10
 Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 3/99 (3%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLD--YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
           ++G L K G +    ++ R F L      L Y++   +  P G I L  C          
Sbjct: 4   KQGCLLKQGHRR-KNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSN 62

Query: 239 PPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
              ++++     +   +  Y   A +  +R +WI+A+Q 
Sbjct: 63  GRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQM 101

>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (102), Expect = 2e-06
 Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 3/97 (3%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEK-KEPKATLRISELNVVIAPS--KIEH 117
           G L+K+G     +  R+F+L E    + YY     ++P   + +    V    S      
Sbjct: 6   GCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRK 65

Query: 118 PHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154
                L  +      H ++     +    W  AI+ A
Sbjct: 66  SEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMA 102

>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} Length = 126

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Calcium-dependent activator protein for secretion, CAPS
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (120), Expect = 1e-08
 Identities = 22/100 (22%), Positives = 34/100 (34%), Gaps = 7/100 (7%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYH----EEPLSAYPKGEIFLGHCSDGYTVRL 236
             G+LW  G      ++KR+F L                 A P+  + L   +  YT   
Sbjct: 10  HSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDP- 68

Query: 237 GVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
              PG +     F          F++    DR  W+QA+ 
Sbjct: 69  --QPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMY 106

>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} Length = 126

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Calcium-dependent activator protein for secretion, CAPS
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 5e-04
 Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 3/111 (2%)

Query: 59  MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHP 118
             G+L   GK   K   +RF +        + +   +E KA  +             +  
Sbjct: 10  HSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQ 69

Query: 119 HSLQLTFMKDGSTRHIYVYH---EESQSIMNWYHAIRNAKFHRLQVAFPSA 166
             L+       + +         ++ Q  + W  A+  A     +   P+ 
Sbjct: 70  PGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQ 120

>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 122

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 49.1 bits (116), Expect = 3e-08
 Identities = 9/105 (8%), Positives = 34/105 (32%), Gaps = 10/105 (9%)

Query: 182 EGWLWKTGPKNAD-------AYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCS--DGY 232
           EG++ +    ++        ++ K +      ++ ++++        E+        D  
Sbjct: 11  EGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQ 70

Query: 233 TVRLGVPPGAKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQ 276
              + +      +     +K      +   A    +  QW+ +++
Sbjct: 71  NAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLK 115

>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 147

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: 3-phosphoinositide dependent protein kinase-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 5e-08
 Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 14/96 (14%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           + G + K         R+R   L     +Y+ +P++   KGEI                 
Sbjct: 50  KMGPVDKRKGLF---ARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQE----------LR 96

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
                  TF + TP R Y      + +  +W + +Q
Sbjct: 97  PEAKNFKTFFVHTPNRTYYLMD-PSGNAHKWCRKIQ 131

>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 3, FGD3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 7e-08
 Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 9/98 (9%)

Query: 183 GWLWKTGPKNADAYRKRWFTLDYRK---LMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
           G L  +       + + W  +       L              I L  C          P
Sbjct: 5   GPLRLSESGET--WSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPD----P 58

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
               D G  + L+  ++ +  SA SA  + QW++ + T
Sbjct: 59  EERLDSGHVWKLQWAKQSWYLSASSAELQQQWLETLST 96

>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 3, FGD3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 8e-05
 Identities = 7/96 (7%), Positives = 26/96 (27%), Gaps = 1/96 (1%)

Query: 59  MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHP 118
           + G L         +      +   +  + +     ++ +    I   +  ++    E  
Sbjct: 3   LCGPLRLSES-GETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDPEER 61

Query: 119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154
                 +    + +  Y+    ++    W   +  A
Sbjct: 62  LDSGHVWKLQWAKQSWYLSASSAELQQQWLETLSTA 97

>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]} Length = 119

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 48.1 bits (113), Expect = 7e-08
 Identities = 17/114 (14%), Positives = 39/114 (34%), Gaps = 8/114 (7%)

Query: 175 LTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTV 234
           L +D    G++ K G      +++R+F L   +L +  E  +      +      +    
Sbjct: 6   LGKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGEAPQSLLTMEEIQSVE---- 61

Query: 235 RLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQR 288
                   K++          + +     S P+  QW + ++  +    +  QR
Sbjct: 62  ----ETQIKERKCLLLKIRGGKQFVLQCDSDPELVQWKKELRDAYREAQQLVQR 111

>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac-alpha serine/threonine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (113), Expect = 7e-08
 Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 9/102 (8%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLM-YHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
           +EGWL K G      +R R+F L        ++E      + E  L + S          
Sbjct: 9   KEGWLHKRGEYIK-TWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQL---M 64

Query: 240 PGAKDQGFTFTLKTPQ----RWYQFSALSAPDRDQWIQAVQT 277
              + +  TF ++  Q        F   +  +R++W  A+QT
Sbjct: 65  KTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQT 106

>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac-alpha serine/threonine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 1e-06
 Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 3/97 (3%)

Query: 61  GFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATL---RISELNVVIAPSKIEH 117
           G+L KRG+    + PR F+L      I Y  + +   +        S     +  ++   
Sbjct: 11  GWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPR 70

Query: 118 PHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154
           P++  +  ++  +      + E  +    W  AI+  
Sbjct: 71  PNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTV 107

>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} Length = 109

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.0 bits (110), Expect = 2e-07
 Identities = 15/96 (15%), Positives = 29/96 (30%), Gaps = 6/96 (6%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
             G+L+++   +   ++  WF +  + L  +             L   +           
Sbjct: 10  MSGYLYRSK-GSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLV-----KD 63

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
              +      L     +Y F A  A    +WI A Q
Sbjct: 64  ENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQ 99

>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} Length = 109

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (79), Expect = 0.003
 Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 4/96 (4%)

Query: 59  MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHP 118
           M G+L +       +    FV   I + + Y     ++  A      L   +   K +  
Sbjct: 10  MSGYLYRSKGSKKPWKHLWFV---IKNKVLYTYAASEDVAALESQPLLGFTVTLVK-DEN 65

Query: 119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154
              ++  +            +++ S   W  A +  
Sbjct: 66  SESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEG 101

>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]} Length = 133

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho GTPase-activating protein 21
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (110), Expect = 2e-07
 Identities = 16/105 (15%), Positives = 30/105 (28%), Gaps = 11/105 (10%)

Query: 181 REGWLWKTGPKNAD---------AYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDG 231
           +EGWL                   +++ +  L    L  +++        E       + 
Sbjct: 3   KEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNA 62

Query: 232 YTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
             +   +      +   F L T      F A    D   WI+ +Q
Sbjct: 63  CLID--ISYSETKRKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQ 105

>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 101

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositide phospholipase C, PLC-gamma-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.2 bits (108), Expect = 3e-07
 Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 3/96 (3%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           + G L+   P N   +   +F L   K+ Y EE  S   +G + +  C     +R     
Sbjct: 3   KNGILYLEDPVN-HEWYPHYFVLTSSKIYYSEETSSDLLRGVLDVPACQ--IAIRPEGKN 59

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
                         Q     +A S  +   W++ ++
Sbjct: 60  NRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIR 95

>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 101

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositide phospholipase C, PLC-gamma-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.5 bits (83), Expect = 5e-04
 Identities = 13/95 (13%), Positives = 28/95 (29%), Gaps = 1/95 (1%)

Query: 60  DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPH 119
           +G L      + +++P  FVL                      +    + I P    +  
Sbjct: 4   NGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDLLRGVLD-VPACQIAIRPEGKNNRL 62

Query: 120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154
            +    M   +   + V  +  + + +W   IR  
Sbjct: 63  FVFSISMPSVAQWSLDVAADSQEELQDWVKKIREV 97

>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]} Length = 123

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Human (Homo sapiens), brain 2 isoform [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 7e-07
 Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 8/103 (7%)

Query: 182 EGWLWKTGPKNAD-------AYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTV 234
           EG L +     A        +++  +  L    L ++++  +A                 
Sbjct: 11  EGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARA 70

Query: 235 RLGVPPGAKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQ 276
           +  V    + +   F L     + Y F A    +   W++ V 
Sbjct: 71  QGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVN 113

>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} Length = 136

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SH2 and PH domain-containing adapter protein APS
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.6 bits (107), Expect = 7e-07
 Identities = 24/147 (16%), Positives = 43/147 (29%), Gaps = 47/147 (31%)

Query: 181 REGWLWK-------TGPKNADAYRKRWFTL------DYRKLMYHEEPLSAYPKGEIFLGH 227
           REG L         +GP     ++K    L      +  +L +   P ++ PK  I L  
Sbjct: 20  REGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSA 79

Query: 228 CSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQ 287
             +  T    +P    ++  TF LK                                   
Sbjct: 80  IIEVRTT---MPLEMPEKDNTFVLKVENG------------------------------- 105

Query: 288 RWYQFSALSAPDRDQWIQAVQTVLDTP 314
             Y    + +  +  W+  +Q  +D+ 
Sbjct: 106 AEYILETIDSLQKHSWVADIQGCVDSG 132

>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 136

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Signal-transducing adaptor protein 1, STAP-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (103), Expect = 2e-06
 Identities = 15/96 (15%), Positives = 29/96 (30%), Gaps = 6/96 (6%)

Query: 182 EGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPG 241
           EG+L          Y   W  L    L ++ +  S     ++ +   +            
Sbjct: 14  EGFLLIKRSGYR-EYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLTE-----QNS 67

Query: 242 AKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277
            +     FTL  P+   Q    +    ++W   + T
Sbjct: 68  TEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILT 103

>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} Length = 106

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Mouse (Mus musculus), brain [TaxId: 10090]

 Score = 43.1 bits (100), Expect = 3e-06
 Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 8/103 (7%)

Query: 182 EGWLWKTGPKNAD-------AYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTV 234
           EG+L +     A        ++   +  ++ +++ ++++  SA                 
Sbjct: 2   EGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEA 61

Query: 235 RLGVPPGAKDQGF-TFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
              V    K +        +    Y F A    + + WIQA+ 
Sbjct: 62  ICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAIS 104

>d1dcqa2 g.45.1.1 (A:247-368) Pyk2-associated protein beta ARF-GAP domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 122

class: Small proteins
fold: ArfGap/RecO-like zinc finger
superfamily: ArfGap/RecO-like zinc finger
family: Pyk2-associated protein beta ARF-GAP domain
domain: Pyk2-associated protein beta ARF-GAP domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.5 bits (102), Expect = 4e-06
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 1   MKQIGNNVSKLKYEMRVPASYKV-PTSSCPQVLLKEWIRSKYEREEFRHPE 50
            K IGN       E  +P+   V P      +  K++I +KY    +   +
Sbjct: 71  AKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKK 121

>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: DCC-interacting protein 13-alpha, APPL1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (98), Expect = 6e-06
 Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 8/98 (8%)

Query: 181 REGWLWKTGPK--NADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV 238
           + G+L         +  + ++++      LM             + + +CS        V
Sbjct: 7   KAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARG-DVAGGLAMDIDNCSVMA-----V 60

Query: 239 PPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
               +   F  T    ++     A S  D ++WI  + 
Sbjct: 61  DCEDRRYCFQITSFDGKKSSILQAESKKDHEEWICTIN 98

>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dynamin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (96), Expect = 1e-05
 Identities = 13/100 (13%), Positives = 31/100 (31%), Gaps = 4/100 (4%)

Query: 181 REGWLWKTGPKNA-DAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
           R+GWL            ++ WF L    L ++++      K  + + +       +  + 
Sbjct: 5   RKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMS 64

Query: 240 PGAKDQGFT---FTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
                  F      +    R  + +  +  + D W  +  
Sbjct: 65  SKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFL 104

>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Phosphotyrosine-binding domain (PTB)
domain: Insulin receptor substrate 1, IRS-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 8e-05
 Identities = 18/130 (13%), Positives = 32/130 (24%), Gaps = 31/130 (23%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP 240
           + G+L K          KR+F L           L  Y   + +                
Sbjct: 4   KVGYLRKPKS-----MHKRFFVLRAASEAGGPARLEYYENEKKWRHKS------------ 46

Query: 241 GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDR 300
                             +   L +          +      L T    +  +A S  ++
Sbjct: 47  --------------SAPKRSIPLESCFNINKRADSKNKHLVALYTRDEHFAIAADSEAEQ 92

Query: 301 DQWIQAVQTV 310
           D W QA+  +
Sbjct: 93  DSWYQALLQL 102

>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: KIAA1914
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (88), Expect = 1e-04
 Identities = 13/97 (13%), Positives = 28/97 (28%), Gaps = 10/97 (10%)

Query: 181 REGWLWKTGPKNADAYRKRWFTLDYRKL-MYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP 239
              +L          ++ RW ++    L  Y +   S   +  + L  C       +   
Sbjct: 3   TSSYLNVLVNSQ---WKSRWCSVRDNHLHFYQDRNRSKVAQQPLSLVGCE------VVPD 53

Query: 240 PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
           P          L   +   +  A S+ +   W+  + 
Sbjct: 54  PSPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLL 90

>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dedicator of cytokinesis protein 9, DOCK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (90), Expect = 1e-04
 Identities = 15/101 (14%), Positives = 32/101 (31%), Gaps = 5/101 (4%)

Query: 181 REGWLWKTGPKNA-----DAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVR 235
           + GWL+K    +A      ++++R+F L       +        K            +  
Sbjct: 20  KHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCM 79

Query: 236 LGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276
             V      +         +  Y  +A S  + ++WI  + 
Sbjct: 80  GVVQNNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILN 120

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	321
d2coaa1	112	Protein kinase c, d2 type {Human (Homo sapiens) [T	99.9
d1faoa_	100	Dual adaptor of phosphotyrosine and 3-phosphoinosi	99.89
d1eaza_	103	Tapp1 {Human (Homo sapiens) [TaxId: 9606]}	99.85
d2fjla1	101	Phosphoinositide phospholipase C, PLC-gamma-1 {Rat	99.85
d1faoa_	100	Dual adaptor of phosphotyrosine and 3-phosphoinosi	99.85
d2dyna_	111	Dynamin {Human (Homo sapiens) [TaxId: 9606]}	99.85
d1upqa_	107	Phosphoinositol 3-phosphate binding protein-1, PEP	99.85
d2coda1	102	Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96	99.84
d2coca1	99	FYVE, RhoGEF and PH domain containing protein 3, F	99.84
d1v89a_	118	Rho-GTPase-activating protein 25 (KIAA0053) {Human	99.83
d1x1fa1	136	Signal-transducing adaptor protein 1, STAP-1 {Huma	99.83
d1v5pa_	126	Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}	99.83
d1v5ua_	117	SET binding factor 1, Sbf1 {Mouse (Mus musculus) [	99.82
d1v88a_	130	Oxysterol binding protein-related protein 8 (ORP-8	99.82
d1u5fa1	111	Src-associated adaptor protein Skap2 {Mouse (Mus m	99.81
d1plsa_	113	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	99.81
d2coaa1	112	Protein kinase c, d2 type {Human (Homo sapiens) [T	99.81
d1wgqa_	109	FYVE, RhoGEF and PH domain containing protein 6, F	99.81
d2fjla1	101	Phosphoinositide phospholipase C, PLC-gamma-1 {Rat	99.81
d1u5da1	106	Src kinase-associated phosphoprotein SKAP55 (SCAP1	99.81
d1btka_	169	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	99.81
d1fgya_	127	Grp1 {Mouse (Mus musculus) [TaxId: 10090]}	99.8
d1w1ha_	147	3-phosphoinositide dependent protein kinase-1 {Hum	99.79
d2i5fa1	104	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	99.79
d1wi1a_	126	Calcium-dependent activator protein for secretion,	99.79
d2j59m1	133	Rho GTPase-activating protein 21 {Human (Homo sapi	99.78
d1omwa2	119	G-protein coupled receptor kinase 2 (beta-adrenerg	99.78
d1qqga1	103	Insulin receptor substrate 1, IRS-1 {Human (Homo s	99.78
d1u5ea1	209	Src-associated adaptor protein Skap2 {Mouse (Mus m	99.77
d1eaza_	103	Tapp1 {Human (Homo sapiens) [TaxId: 9606]}	99.77
d1wg7a_	150	Dedicator of cytokinesis protein 9, DOCK9 {Human (	99.77
d2elba2	101	DCC-interacting protein 13-alpha, APPL1 {Human (Ho	99.76
d2dyna_	111	Dynamin {Human (Homo sapiens) [TaxId: 9606]}	99.76
d1wgqa_	109	FYVE, RhoGEF and PH domain containing protein 6, F	99.76
d2cofa1	95	KIAA1914 {Human (Homo sapiens) [TaxId: 9606]}	99.75
d1unqa_	118	Rac-alpha serine/threonine kinase {Human (Homo sap	99.75
d1x1ga1	116	Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}	99.74
d1v5ma_	136	SH2 and PH domain-containing adapter protein APS {	99.74
d1fgya_	127	Grp1 {Mouse (Mus musculus) [TaxId: 10090]}	99.74
d1v5ua_	117	SET binding factor 1, Sbf1 {Mouse (Mus musculus) [	99.74
d1v89a_	118	Rho-GTPase-activating protein 25 (KIAA0053) {Human	99.74
d1unqa_	118	Rac-alpha serine/threonine kinase {Human (Homo sap	99.73
d2coda1	102	Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96	99.73
d1x1fa1	136	Signal-transducing adaptor protein 1, STAP-1 {Huma	99.73
d1upqa_	107	Phosphoinositol 3-phosphate binding protein-1, PEP	99.73
d1plsa_	113	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	99.73
d1wi1a_	126	Calcium-dependent activator protein for secretion,	99.71
d2i5fa1	104	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	99.71
d1v5pa_	126	Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}	99.7
d1u5fa1	111	Src-associated adaptor protein Skap2 {Mouse (Mus m	99.7
d1v88a_	130	Oxysterol binding protein-related protein 8 (ORP-8	99.69
d1btna_	106	beta-spectrin {Mouse (Mus musculus), brain [TaxId:	99.69
d1wjma_	123	beta-spectrin {Human (Homo sapiens), brain 2 isofo	99.68
d2coca1	99	FYVE, RhoGEF and PH domain containing protein 3, F	99.68
d1btka_	169	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	99.67
d1u5da1	106	Src kinase-associated phosphoprotein SKAP55 (SCAP1	99.67
d2j59m1	133	Rho GTPase-activating protein 21 {Human (Homo sapi	99.66
d1x1ga1	116	Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}	99.66
d1wg7a_	150	Dedicator of cytokinesis protein 9, DOCK9 {Human (	99.66
d1omwa2	119	G-protein coupled receptor kinase 2 (beta-adrenerg	99.65
d2cofa1	95	KIAA1914 {Human (Homo sapiens) [TaxId: 9606]}	99.65
d1qqga1	103	Insulin receptor substrate 1, IRS-1 {Human (Homo s	99.65
d2elba2	101	DCC-interacting protein 13-alpha, APPL1 {Human (Ho	99.64
d1w1ha_	147	3-phosphoinositide dependent protein kinase-1 {Hum	99.63
d1u5ea1	209	Src-associated adaptor protein Skap2 {Mouse (Mus m	99.63
d1droa_	122	beta-spectrin {Fruit fly (Drosophila melanogaster)	99.62
d1btna_	106	beta-spectrin {Mouse (Mus musculus), brain [TaxId:	99.6
d1v5ma_	136	SH2 and PH domain-containing adapter protein APS {	99.51
d1wjma_	123	beta-spectrin {Human (Homo sapiens), brain 2 isofo	99.51
d1droa_	122	beta-spectrin {Fruit fly (Drosophila melanogaster)	99.46
d1v61a_	132	Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [	99.2
d1dcqa2	122	Pyk2-associated protein beta ARF-GAP domain {Mouse	99.12
d2dfka2	162	Rho guanine nucleotide exchange factor 9, Collybis	99.02
d1v61a_	132	Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [	98.93
d1zc3b1	109	Exocyst complex protein EXO84 {Rat (Rattus norvegi	98.91
d1maia_	119	Phospholipase C delta-1 {Rat (Rattus norvegicus) [	98.8
d1maia_	119	Phospholipase C delta-1 {Rat (Rattus norvegicus) [	98.78
d2dfka2	162	Rho guanine nucleotide exchange factor 9, Collybis	98.7
d1dbha2	133	Son of sevenless-1 (sos-1) {Human (Homo sapiens) [	98.58
d1xcga2	140	Rho guanine nucleotide exchange factor 11, PDZ-Rho	98.36
d1dbha2	133	Son of sevenless-1 (sos-1) {Human (Homo sapiens) [	98.34
d1zc3b1	109	Exocyst complex protein EXO84 {Rat (Rattus norvegi	98.3
d1ki1b2	142	GEF of intersectin {Human (Homo sapiens) [TaxId: 9	98.29
d1ntya2	121	Triple functional domain protein TRIO {Human (Homo	98.09
d1txda2	114	Rho guanine nucleotide exchange factor 12 {Human (	98.0
d1ki1b2	142	GEF of intersectin {Human (Homo sapiens) [TaxId: 9	97.72
d1fhoa_	119	UNC-89 {Nematode (Caenorhabditis elegans) [TaxId:	97.69
d1kz7a2	147	Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId	97.63
d1txda2	114	Rho guanine nucleotide exchange factor 12 {Human (	97.6
d1ntya2	121	Triple functional domain protein TRIO {Human (Homo	97.5
d1xcga2	140	Rho guanine nucleotide exchange factor 11, PDZ-Rho	97.46
d2adza1	105	Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 1	97.22
d1kz7a2	147	Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId	96.51
d1fhoa_	119	UNC-89 {Nematode (Caenorhabditis elegans) [TaxId:	96.1
d2zkmx3	131	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	95.46
d2zkmx3	131	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	94.72
d1zsqa1	125	Myotubularin-related protein 2, N-terminal domain	84.47
d1foea2	162	GEF of TIAM1 (T-Lymphoma invasion and metastasis i	84.25

>d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Protein kinase c, d2 type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=9.7e-25  Score=169.85  Aligned_cols=107  Identities=19%  Similarity=0.223  Sum_probs=86.4

Q ss_pred             ceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCC---CCCCCCceEEEEeCCe
Q psy9639         180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP---GAKDQGFTFTLKTPQR  256 (321)
Q Consensus       180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~---~~~~~~~~F~i~t~~r  256 (321)
                      +|+|||.|+|... +.||+|||||+++.|+||+++.+..|+|.|+|..+.   .|..+.+.   .....++||+|+|++|
T Consensus         2 lk~GwL~k~~~~~-~~wkkRwFvL~~~~L~YYk~~~~~~p~g~I~L~~~~---~v~~~~~~~~~~~~~~~~~F~I~T~~r   77 (112)
T d2coaa1           2 LREGWVVHYSNKD-TLRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEIL---TVESAQNFSLVPPGTNPHCFEIVTANA   77 (112)
T ss_dssp             SEEEEEEECCSSS-CCCEEEEEEECSSEEEEESSSSCSSCSEEEETTTCC---EEEESCCCSSSCTTSCCEEEEEECSSC
T ss_pred             ceEEEEEEECCCC-CCeeEEEEEEEcceEEEEeccCCCccceEEeeeccc---cccccccccccccCCCccEEEEEeCCe
Confidence            6899999999988 899999999999999999999999999999998763   34433221   1224679999999999


Q ss_pred             EEEEEcCCHHHHHHHHHHHhhccccccccCceEEEEecCCHHHHHHHHHHHHHhh
Q psy9639         257 WYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVL  311 (321)
Q Consensus       257 ~~~f~A~s~~e~~~Wv~aL~~ai~~~l~~~~~~~~l~a~s~~e~~~Wi~al~~~i  311 (321)
                      +|+|.|++.+++                     +.+++++++++++|++||+.|+
T Consensus        78 tyy~~~~~~~~~---------------------~~~s~~~~~~~~~W~~aI~~A~  111 (112)
T d2coaa1          78 TYFVGEMPGGTP---------------------GGPSGQGAEAARGWETAIRQAL  111 (112)
T ss_dssp             CCCEECCSCCCS---------------------SSCCCCCSHHHHHHHHHHHHHG
T ss_pred             EEEEecCCcccc---------------------ccccccChHHHHHHHHHHHHhh
Confidence            999988753332                     2367888888888888888875

>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.8e-23  Score=156.73  Aligned_cols=95  Identities=27%  Similarity=0.506  Sum_probs=78.0

Q ss_pred             cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEE
Q psy9639         179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWY  258 (321)
Q Consensus       179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~  258 (321)
                      ..|+|||.|+|+.. +.|++|||+|.++.|+||+++.+..|.|.|+|..+.   .|....   ...++++|.|.+++|+|
T Consensus         4 ~~KeG~L~K~~~~~-k~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~---~v~~~~---~~~~~~~F~i~~~~r~~   76 (100)
T d1faoa_           4 GTKEGYLTKQGGLV-KTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECS---AVQFDY---SQERVNCFCLVFPFRTF   76 (100)
T ss_dssp             TCEEEEEEEECSSS-CCEEEEEEEEETTEEEEESSTTCSSCSEEEEGGGCC---EEEEEC---SSSSSSEEEEEETTEEE
T ss_pred             ccEEEEEEEeCCCC-CCceEEEEEEECCEEEEEeccCCccCceEEechheE---EEEecc---ccccccccccccCCeEE
Confidence            37899999999887 899999999999999999999999999999996542   232221   12467899999999999


Q ss_pred             EEEcCCHHHHHHHHHHHhhccc
Q psy9639         259 QFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       259 ~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      +|+|+|++++++||.||+++|+
T Consensus        77 ~l~a~s~~~~~~Wi~ai~~~i~   98 (100)
T d1faoa_          77 YLCAKTGVEADEWIKILRWKLS   98 (100)
T ss_dssp             EEECSSHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCHHHHHHHHHHHHHHHh
Confidence            9888887777777777777663

>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.7e-21  Score=148.10  Aligned_cols=98  Identities=22%  Similarity=0.315  Sum_probs=79.5

Q ss_pred             CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeE
Q psy9639         178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRW  257 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~  257 (321)
                      .++++|||+|++... ++|++|||+|.++.|.||+++.+..|.|.|+|..+.   .+............++|.|.+++++
T Consensus         2 ~vik~G~L~K~~~~~-~~Wkkr~fvL~~~~l~yy~~~~~~~~~~~i~l~~~~---~~~~~~~~~~~~~~~~f~i~~~~~~   77 (103)
T d1eaza_           2 AVIKAGYCVKQGAVM-KNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVH---KVQECKQSDIMMRDNLFEIVTTSRT   77 (103)
T ss_dssp             CCSEEEEEEEECTTT-CCEEEEEEEECSSEEEEESSTTCSSCSEEEEGGGCC---EEEECTTHHHHTCSSEEEEECSSCE
T ss_pred             ceEEEEEEEEECCCC-CCeeEEEEEEECCEEEEEecccCcccceEEEccceE---EeeccccccccccceEEEEEeCCEE
Confidence            578999999999877 799999999999999999999998999999997653   2332222222345789999999999


Q ss_pred             EEEEcCCHHHHHHHHHHHhhcc
Q psy9639         258 YQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       258 ~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      |+|+|+|++|+++|+.+|+.||
T Consensus        78 ~~~~a~s~~e~~~W~~aI~~ai   99 (103)
T d1eaza_          78 FYVQADSPEEMHSWIKAVSGAI   99 (103)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCHHHHHHHHHHHHHHH
Confidence            9987777777777777777765

>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositide phospholipase C, PLC-gamma-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=2.7e-21  Score=146.96  Aligned_cols=94  Identities=21%  Similarity=0.400  Sum_probs=76.4

Q ss_pred             ceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC---Ce
Q psy9639         180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP---QR  256 (321)
Q Consensus       180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~---~r  256 (321)
                      +|+|||+|+++.. +.|++|||+|.++.|+||+++.+..|.|.|+|.    ++.|.... .....++|+|.|.++   ++
T Consensus         2 iK~G~L~k~~~~~-k~W~kR~fvL~~~~L~yy~~~~~~~~~~~i~l~----~~~v~~~~-~~~~~~~~~f~i~~~~~~~~   75 (101)
T d2fjla1           2 IKNGILYLEDPVN-HEWYPHYFVLTSSKIYYSEETSSDLLRGVLDVP----ACQIAIRP-EGKNNRLFVFSISMPSVAQW   75 (101)
T ss_dssp             CEEEEEEEEETTT-TEEEEEEEEEETTEEEECCCCSCTCCCEEECST----TCEEEEET-TCSSSCSCEEEEECTTTSSC
T ss_pred             ceEEEEEEEcCCC-CCCeEEEEEEECCEEEEEeccccceecceEEcC----CceeEeee-eecccccceeEEeccccccE
Confidence            6899999999877 899999999999999999999999999999994    45665432 333456799999976   37


Q ss_pred             EEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         257 WYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       257 ~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +|+|+|+|++|+++||.||++|+
T Consensus        76 ~~~~~a~s~~e~~~Wi~ai~~~~   98 (101)
T d2fjla1          76 SLDVAADSQEELQDWVKKIREVA   98 (101)
T ss_dssp             CEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCHHHHHHHHHHHHHHH
Confidence            89977777777777777777665

>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6e-21  Score=144.90  Aligned_cols=94  Identities=22%  Similarity=0.371  Sum_probs=82.1

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHI  134 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~  134 (321)
                      .+.|+|||.|+|+..+.|++|||||.  ++.|.||++ .+..|+|.|+|.++..+-.....+++++|+|.    ++.|+|
T Consensus         3 ~~~KeG~L~K~~~~~k~Wk~R~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~----~~~r~~   76 (100)
T d1faoa_           3 LGTKEGYLTKQGGLVKTWKTRWFTLH--RNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLV----FPFRTF   76 (100)
T ss_dssp             TTCEEEEEEEECSSSCCEEEEEEEEE--TTEEEEESSTTCSSCSEEEEGGGCCEEEEECSSSSSSEEEEE----ETTEEE
T ss_pred             CccEEEEEEEeCCCCCCceEEEEEEE--CCEEEEEeccCCccCceEEechheEEEEeccccccccccccc----cCCeEE
Confidence            46899999999999999999999999  999999999 89999999999998665444445678888875    345999


Q ss_pred             EEEeCChHHHHHHHHHHHhhh
Q psy9639         135 YVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      +|.|+|.+++.+|+++|+++.
T Consensus        77 ~l~a~s~~~~~~Wi~ai~~~i   97 (100)
T d1faoa_          77 YLCAKTGVEADEWIKILRWKL   97 (100)
T ss_dssp             EEECSSHHHHHHHHHHHHHHH
T ss_pred             EEEeCCHHHHHHHHHHHHHHH
Confidence            999999999999999998764

>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dynamin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=5e-21  Score=148.19  Aligned_cols=96  Identities=17%  Similarity=0.238  Sum_probs=75.2

Q ss_pred             cceEEEEEEeCCCC-CCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC--
Q psy9639         179 FGREGWLWKTGPKN-ADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ--  255 (321)
Q Consensus       179 ~~k~G~L~K~g~~~-~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~--  255 (321)
                      ++|+|||.|+++.. .+.||+|||+|+++.|+||+++.+..|.|.|+|..    +.|..+. .....++++|.|.++.  
T Consensus         3 vik~GwL~k~~~~~~~~~WkkRwFvL~~~~L~yyk~~~~~~~~~~i~l~~----~~v~~~~-~~~~~~~~~F~l~~~~~~   77 (111)
T d2dyna_           3 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDN----LKLRDVE-KGFMSSKHIFALFNTEQR   77 (111)
T ss_dssp             EEEEEEEEETTCCTTTTSSEEEEEEEESSEEEEESSTTCCCEEEEEECTT----EEEEEEC-CCSTTCSEEEEEEESSCS
T ss_pred             EEEEeeEEEECCCCCcCCceEEEEEEECCEEEEEcchhhccccccccccc----ceeEeec-cccccccccEEeeecccc
Confidence            68999999986543 35799999999999999999999999999999954    5555433 2333578999998753  


Q ss_pred             ------eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         256 ------RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       256 ------r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                            |+|+|+|+|++|+.+|++||..|+
T Consensus        78 ~~~~~~r~~~l~a~s~ed~~~W~~al~~A~  107 (111)
T d2dyna_          78 NVYKDYRQLELACETQEEVDSWKASFLRAG  107 (111)
T ss_dssp             CSBTTBSSEEEEESSHHHHHHHHHHHHHTT
T ss_pred             ccccCceeEEEECCCHHHHHHHHHHHHHhc
Confidence                  678877777777777777777665

>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositol 3-phosphate binding protein-1, PEPP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6.2e-21  Score=145.81  Aligned_cols=100  Identities=26%  Similarity=0.503  Sum_probs=82.0

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC-
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP-  254 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~-  254 (321)
                      +.+++++|||+|+++...+.|++|||+|+++.|+||+++.+..|.+.|+|..    +.|....+......+++|.|.++ 
T Consensus         6 ~~~~~~~G~L~k~~~~~~k~W~kr~~vL~~~~L~~y~~~~~~~~~~~i~l~~----~~v~~~~~~~~~~~~~~~~i~~~~   81 (107)
T d1upqa_           6 NLPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPS----YNIRPDGPGAPRGRRFTFTAEHPG   81 (107)
T ss_dssp             TSCEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTTCCSCCEEEEGGG----CEEEECCSSCTTSSSSEEEEECTT
T ss_pred             CCceeEEEEEEEeCCCCCCCeeEEEEEEECCEEEEecCcccccccceecccc----eEEEEeccCcccCcceEEEEEcCC
Confidence            4467899999999877667899999999999999999999999999999954    55655444444556799999976 


Q ss_pred             CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         255 QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       255 ~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +++|+|+|+|++|+++||+||+.|+
T Consensus        82 ~~~~~~~a~s~~e~~~Wi~al~~A~  106 (107)
T d1upqa_          82 MRTYVLAADTLEDLRGWLRALGRAS  106 (107)
T ss_dssp             SCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEcCCHHHHHHHHHHHHHHh
Confidence            5899988888888888888887764

>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Centaurin-delta 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=5.8e-21  Score=145.46  Aligned_cols=90  Identities=29%  Similarity=0.528  Sum_probs=74.4

Q ss_pred             ceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEE
Q psy9639         180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQ  259 (321)
Q Consensus       180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~  259 (321)
                      +++|||.|+++.+.+.|++|||+|+++.|+||+++.+..|.|.|+|..+   ..+..       .++++|.|.+++|+|+
T Consensus         2 ik~G~L~K~~~~~~~~W~kr~fvL~~~~L~~~~~~~~~~~~~~i~L~~~---~~~~~-------~~~~~f~i~~~~~~~~   71 (102)
T d2coda1           2 VKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAI---STVRV-------QGDNKFEVVTTQRTFV   71 (102)
T ss_dssp             CEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSCCSSCCCEEETTTE---EEEEE-------ETTTEEEEEESSCCEE
T ss_pred             cEEEEEEEECCCCCCCceEEEEEEECCEEEEEeccCcceeEEEEEchhc---eeecc-------ccceeEEEEcCCcEEE
Confidence            6899999999776678999999999999999999999999999999653   22221       2468999999999999


Q ss_pred             EEcCCHHHHHHHHHHHhhcc
Q psy9639         260 FSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       260 f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      |+|+|++++++||+||+.+|
T Consensus        72 l~a~s~~e~~~Wi~ai~~~i   91 (102)
T d2coda1          72 FRVEKEEERNDWISILLNAL   91 (102)
T ss_dssp             EECSSHHHHHHHHHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHHHHHH
Confidence            77777777777777777666

>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 3, FGD3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=6.6e-21  Score=143.78  Aligned_cols=94  Identities=18%  Similarity=0.226  Sum_probs=76.5

Q ss_pred             ceEEEEEEeCCCCCCCcceEEEEEeCC---eeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCe
Q psy9639         180 GREGWLWKTGPKNADAYRKRWFTLDYR---KLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQR  256 (321)
Q Consensus       180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~---~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r  256 (321)
                      +++|||.++...  ++|++|||||+++   .|+||+++.+..|.|.|+|..    +.|....+......+++|.|.+++|
T Consensus         2 ~~~G~L~~~~~~--k~W~krwfvL~~~~~~~ly~~~~~~~~~~~~~i~l~~----~~~~~~~~~~~~~~~~~F~i~~~~r   75 (99)
T d2coca1           2 LLCGPLRLSESG--ETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPS----CKLSVPDPEERLDSGHVWKLQWAKQ   75 (99)
T ss_dssp             SSEEEEEEESSS--SCEEEEEEECCTTCTTCEEEECCTTCSSSCSEECGGG----CEEECCCSSSCCSSSEEEEEEETTE
T ss_pred             ceEEEEEccCCC--CCccEEEEEEecCCccEEEEECcCccccccccccccc----eeeeecccccccCCceEEEEEcCCc
Confidence            468999999753  6899999999866   589999999999999999954    5555443333345689999999999


Q ss_pred             EEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         257 WYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       257 ~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +|+|+|+|++|+++||+||++|+
T Consensus        76 ~~~l~A~s~~e~~~Wi~aL~~Aa   98 (99)
T d2coca1          76 SWYLSASSAELQQQWLETLSTAA   98 (99)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCHHHHHHHHHHHHHhc
Confidence            99988888888888888888764

>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho-GTPase-activating protein 25 (KIAA0053)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2e-20  Score=145.67  Aligned_cols=98  Identities=19%  Similarity=0.366  Sum_probs=74.6

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-  255 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-  255 (321)
                      ..++++|||+|++... +.|++|||+|+++.|+||+++.+..+.+.|+|..    +.|...........+++|+|.++. 
T Consensus         6 s~~~k~G~L~K~~~~~-k~WkkR~fvL~~~~l~y~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~f~l~~~~~   80 (118)
T d1v89a_           6 SGPIKMGWLKKQRSIV-KNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPG----CTIKEIATNPEEAGKFVFEIIPASW   80 (118)
T ss_dssp             SCEEEEEEEEEECSSS-SCEEEEEEEEETTEEEEESSSSCCSCSEEECSTT----EEEEEECCCSSCCCCCEEEEEESCC
T ss_pred             CCCeEEEEEEEECCCC-CCcEEEEEEEECCEEEEecccCcccccceeccCc----eEEEEeccccccCCCcEEEEecCCC
Confidence            4679999999999887 8999999999999999999999999999999965    444443323334567999998763 


Q ss_pred             -------eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         256 -------RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       256 -------r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                             ++|+|+|++++|+++||.||++|+
T Consensus        81 ~~~~~~~~~~~~~a~s~ee~~~Wi~aI~~a~  111 (118)
T d1v89a_          81 DQNRMGQDSYVLMASSQAEMEEWVKFLRRVA  111 (118)
T ss_dssp             SSCCSSCCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             cceecCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence                   677855555555555555555544

>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Signal-transducing adaptor protein 1, STAP-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.6e-20  Score=150.70  Aligned_cols=102  Identities=15%  Similarity=0.175  Sum_probs=85.4

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ  255 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~  255 (321)
                      +.++.++|||.|+|... +.|++|||||+++.|+||+++.+..|.|.|+|..+   +.+...  .+....+++|.|++++
T Consensus         8 ~~~~~~eG~L~k~~~~~-k~WkkrwfvL~~~~L~yY~~~~d~~~~~~i~L~~~---~~~~~~--~~~~~~~~~F~i~~~~   81 (136)
T d1x1fa1           8 ALPLYFEGFLLIKRSGY-REYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDL---TCLTEQ--NSTEKNCAKFTLVLPK   81 (136)
T ss_dssp             SSCEEEEEEEEEECTTC-CSCEEEEEEEETTEEEEESCSSCSSCSEECCCSSC---CEEEEC--CCTTSCCCEEEEECSS
T ss_pred             CCCccEEEEEEEECCCC-CCeEEEEEEEcCCEeEEEeecccccccccccccce---eeeeee--cccccccceeeecCCC
Confidence            44678999999999887 89999999999999999999999999999999654   223222  2333567999999999


Q ss_pred             eEEEEEcCCHHHHHHHHHHHhhcccccc
Q psy9639         256 RWYQFSALSAPDRDQWIQAVQTGFTFTL  283 (321)
Q Consensus       256 r~~~f~A~s~~e~~~Wv~aL~~ai~~~l  283 (321)
                      ++|+|+|+|++++++|+.+|+.+|...+
T Consensus        82 ~~~~f~Aes~~e~~~Wi~~I~~v~~~~~  109 (136)
T d1x1fa1          82 EEVQLKTENTESGEEWRGFILTVTELSV  109 (136)
T ss_dssp             CCEEEECSSHHHHHHHHHHHHHHHHSSC
T ss_pred             ceEEEEeCCHHHHHHHHHHHHHHHhccC
Confidence            9999999999999999999999886433

>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=1.4e-20  Score=148.61  Aligned_cols=108  Identities=19%  Similarity=0.289  Sum_probs=78.4

Q ss_pred             hhhCCCcceEEEEEEeCCCCCCCcceEEEEEe--CCeeEeeeCCCCCCcceeEEcccccC--ceEEecCCCCCCCCCCce
Q psy9639         173 KLLTRDFGREGWLWKTGPKNADAYRKRWFTLD--YRKLMYHEEPLSAYPKGEIFLGHCSD--GYTVRLGVPPGAKDQGFT  248 (321)
Q Consensus       173 ~~~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~--~~~L~Yyk~~~~~~~~g~i~L~~~~~--~~~V~~~~~~~~~~~~~~  248 (321)
                      |.+.....++|||+|++....+.|+||||||+  ++.|+||+++.+..+.|.|++..+..  ...+............++
T Consensus         9 p~~~~~~~~~GyL~k~~~~~~k~WkrRwFvL~~~~~~L~yy~~~~~~~~~g~~~l~~i~~~~~~~~~~~~~~~~~~~~~~   88 (126)
T d1v5pa_           9 PYVDRQNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFC   88 (126)
T ss_dssp             CCCCCCCCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSE
T ss_pred             ccccCCCceeeeEEEECCCCCCCeeEEEEEEEcCCCeEEEeeccccccccceeecccceeeeeeccccccccccccccce
Confidence            34445557899999998766689999999995  78899999988877777766644321  112222222222345689


Q ss_pred             EEEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         249 FTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       249 F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      |.+.+++|+|+|+|+|++|+++||+||+.|+.
T Consensus        89 ~~~~~~~r~~~l~Aes~~e~~~Wi~aL~~A~~  120 (126)
T d1v5pa_          89 FVINALSQRYFLQANDQKDLKDWVEALNQASK  120 (126)
T ss_dssp             EEEECSSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred             EEEcCCCeeEEEECCCHHHHHHHHHHHHHHhc
Confidence            99999999999888888888888888887763

>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SET binding factor 1, Sbf1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=4.5e-20  Score=143.29  Aligned_cols=102  Identities=27%  Similarity=0.457  Sum_probs=78.1

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEe--CCeeEeeeCCCCCCcceeEEcccccCceEEecCCCC--CCCCCCceEEEE
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLD--YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP--GAKDQGFTFTLK  252 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~--~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~--~~~~~~~~F~i~  252 (321)
                      ..+.++|||+|++... +.|++|||+|+  +..|+||+++.+..|+|.|+|..+.. +.+......  ......++|.+.
T Consensus         6 s~~~~eG~L~k~~~~~-k~WkkR~fvL~~~~~~L~~~~~~~~~~p~g~i~l~~~~~-v~~~~~~~~~~~~~~~~~~~~~~   83 (117)
T d1v5ua_           6 SGRSYEGILYKKGAFM-KPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEA-VAPGTPTIGAPKTVDEKAFFDVK   83 (117)
T ss_dssp             CSSSEEEEEEECCCSS-SCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEE-EECCCCCTTSCSSSCTTTCEEEE
T ss_pred             CCCeEEEEEEEECCCC-CCceEEEEEEeCCCCEEEecccccccCcceEEEecceEE-EeecccccccccccccceEEEee
Confidence            4678999999999887 79999999997  46899999999999999999976422 111111111  112235789999


Q ss_pred             eCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         253 TPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       253 t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      +++|+|+|+|+|++++++||.+|+.||.
T Consensus        84 ~~~~~~~~~a~s~~e~~~Wv~~l~~ai~  111 (117)
T d1v5ua_          84 TTRRVYNFCAQDVPSAQQWVDRIQSCLS  111 (117)
T ss_dssp             ESSCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred             CCCcEEEEEeCCHHHHHHHHHHHHHHHh
Confidence            9999999888888888888888887774

>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=4.9e-20  Score=146.00  Aligned_cols=121  Identities=19%  Similarity=0.296  Sum_probs=84.0

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ  255 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~  255 (321)
                      +..++++|||.|++ .. +.|++|||||+++.|+||+++.+..|+|.|+|..    +.|....   ....++||+|.++.
T Consensus         5 ~~~~~~~GwLkk~~-~~-k~WkkRwfvL~~~~L~yyk~~~~~~~~g~i~L~~----~~v~~~~---~~~~~~~f~i~~~~   75 (130)
T d1v88a_           5 SSGIVMADWLKIRG-TL-KSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNA----CEIIERP---SKKDGFCFKLFHPL   75 (130)
T ss_dssp             SSSCCEEEEEEECC-SS-SSCEEEEEEEETTEEEEESCSSSCCCCEEEECSS----CEECCCC---TTTSSCEEEEECTT
T ss_pred             CCCCeEeCeEEeCC-CC-CCceEEEEEEeCCEEEEEcCCCCCcceeEEECCC----eEEEEcc---ccCCCceEEEEcCC
Confidence            34689999996655 44 7899999999999999999999999999999954    5554422   22467899999875


Q ss_pred             eEEEEEcCCHHHHHHHHHHHhhccc-cccccCceEEEEecCCHHHHHHHHHHHHHhhcCC
Q psy9639         256 RWYQFSALSAPDRDQWIQAVQTGFT-FTLKTPQRWYQFSALSAPDRDQWIQAVQTVLDTP  314 (321)
Q Consensus       256 r~~~f~A~s~~e~~~Wv~aL~~ai~-~~l~~~~~~~~l~a~s~~e~~~Wi~al~~~i~~~  314 (321)
                      ...........         ..... .....+.+.|.|+|+|++|+++||+||+.||...
T Consensus        76 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~A~s~~e~~~Wi~al~~~i~~~  126 (130)
T d1v88a_          76 EQSIWAVKGPK---------GEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKSG  126 (130)
T ss_dssp             CCCCSCSSCTT---------SCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTTT
T ss_pred             CcceecccCcc---------cccceeEEecCCcEEEEEECCCHHHHHHHHHHHHHHhhcC
Confidence            43321110000         00011 2222334456789999999999999999998764

>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=1.4e-19  Score=139.48  Aligned_cols=99  Identities=24%  Similarity=0.407  Sum_probs=76.5

Q ss_pred             CCcceEEEEEEeCCCC---CCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecC-CCCCCCCCCceEEEE
Q psy9639         177 RDFGREGWLWKTGPKN---ADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLG-VPPGAKDQGFTFTLK  252 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~---~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~-~~~~~~~~~~~F~i~  252 (321)
                      ..++++|||.|++...   .+.|++|||+|+++.|+||+++.+..|.|.|+|..+    .+... .+......+++|.|+
T Consensus         7 ~~v~k~G~L~k~~~~~~~~~~~W~~r~~vL~~~~L~~y~~~~~~~p~g~i~L~~~----~~~~~~~~~~~~~~~~~f~i~   82 (111)
T d1u5fa1           7 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGY----DVRMNNTLRKDGKKDCCFEIC   82 (111)
T ss_dssp             SSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTCSSCSEEEECTTC----EEEECTTSCSSTTGGGEEEEE
T ss_pred             CCeeEEEEEEEECCCCCCCcCCceEEEEEEECCEEEeeccccccCcceEEEeccc----EEEeeccccccccccceEEEE
Confidence            3679999999987642   358999999999999999999999999999999653    33322 223333467999999


Q ss_pred             eC-CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         253 TP-QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       253 t~-~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ++ +++|+|+|+|++|+++|++||+.+|
T Consensus        83 ~~~~~~~~~~a~s~~e~~~W~~ai~~~i  110 (111)
T d1u5fa1          83 APDKRIYQFTAASPKDAEEWVQQLKFIL  110 (111)
T ss_dssp             CTTSCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred             ccCCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence            86 5899977777777777777776654

>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.3e-19  Score=140.14  Aligned_cols=98  Identities=23%  Similarity=0.350  Sum_probs=80.5

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe-CC
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT-PQ  255 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t-~~  255 (321)
                      ..++++|||.|+|... ++|++|||+|.++.|+||+++.+..|.|.|+|..+    .+.... .+.....++|.|++ ++
T Consensus         3 ~~~ikeG~L~k~~~~~-k~WkkryfvL~~~~L~~y~~~~~~~p~~~i~l~~~----~~~~~~-~~~~~~~~~f~l~~~~~   76 (113)
T d1plsa_           3 PKRIREGYLVKKGSVF-NTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGS----TLTSPC-QDFGKRMFVFKITTTKQ   76 (113)
T ss_dssp             CCCSEEEEEEEESSSS-SCCEEEEEEEETTEEEEESSTTCSSCSEEEESSSC----CEESSC-CSSCCSSSEEEEEETTT
T ss_pred             CCceEEEEEEEeCCCC-CCceEEEEEEECCEEEEEecCCccccceEEECccC----eEEeee-cccCCcceEEEEecCCC
Confidence            3579999999999877 89999999999999999999999999999999654    232222 23335678899986 57


Q ss_pred             eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         256 RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       256 r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      ++|+|+|+|++|+++|+.+|+.||.
T Consensus        77 ~~~~~~a~s~~e~~~Wi~ai~~ai~  101 (113)
T d1plsa_          77 QDHFFQAAFLEERDAWVRDINKAIK  101 (113)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             eEEEEECCCHHHHHHHHHHHHHHHH
Confidence            9999999888888888888888874

>d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Protein kinase c, d2 type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=4.2e-20  Score=143.18  Aligned_cols=92  Identities=15%  Similarity=0.268  Sum_probs=75.9

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC------CCCCCceeEEEEeecCc
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS------KIEHPHSLQLTFMKDGS  130 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~------~~~~~~~~~i~~~~~~~  130 (321)
                      .|+|||.|+|+..++|++|||||.  +++|.||++ .+..|+|.|+|.++..+..+.      ..+++++|+|    .++
T Consensus         2 lk~GwL~k~~~~~~~wkkRwFvL~--~~~L~YYk~~~~~~p~g~I~L~~~~~v~~~~~~~~~~~~~~~~~F~I----~T~   75 (112)
T d2coaa1           2 LREGWVVHYSNKDTLRKRHYWRLD--CKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEI----VTA   75 (112)
T ss_dssp             SEEEEEEECCSSSCCCEEEEEEEC--SSEEEEESSSSCSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEE----ECS
T ss_pred             ceEEEEEEECCCCCCeeEEEEEEE--cceEEEEeccCCCccceEEeeeccccccccccccccccCCCccEEEE----EeC
Confidence            589999999999999999999998  899999999 999999999999986654322      1235566555    467


Q ss_pred             eEEEEEEe-----------CChHHHHHHHHHHHhhh
Q psy9639         131 TRHIYVYH-----------EESQSIMNWYHAIRNAK  155 (321)
Q Consensus       131 ~R~~~l~a-----------~s~~e~~~W~~aLr~a~  155 (321)
                      .|+|||.+           ++++++.+|+++|++|.
T Consensus        76 ~rtyy~~~~~~~~~~~~s~~~~~~~~~W~~aI~~A~  111 (112)
T d2coaa1          76 NATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL  111 (112)
T ss_dssp             SCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred             CeEEEEecCCccccccccccChHHHHHHHHHHHHhh
Confidence            79999966           56778999999999863

>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=3.1e-19  Score=137.06  Aligned_cols=97  Identities=21%  Similarity=0.331  Sum_probs=75.8

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ  255 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~  255 (321)
                      +..++++|||+|+++.. +.|++|||+|+++.|+||+++.+..+.+.|+|..    +.+....+  ...++++|.|.+++
T Consensus         5 ~~~~~~~G~L~k~~~~~-~~W~kr~~vL~~~~L~~~k~~~~~~~~~~i~l~~----~~~~~~~~--~~~~~~~F~i~~~~   77 (109)
T d1wgqa_           5 SSGSTMSGYLYRSKGSK-KPWKHLWFVIKNKVLYTYAASEDVAALESQPLLG----FTVTLVKD--ENSESKVFQLLHKG   77 (109)
T ss_dssp             CCSCSCEEEEEEESSTT-SCCEEEEEEEETTEEEEESCTTCSSCSEEEECSS----EEEEECCC--SSCSSSEEEEEETT
T ss_pred             CCCCcEEEEEEEECCCC-CCceEEEEEEeCCEEEEeccccccccccccccce----eeeeeccc--ccccceeeeeeccc
Confidence            34678999999999887 7999999999999999999999999999999954    44444332  23568999999764


Q ss_pred             -eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         256 -RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       256 -r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                       ++|+|+|+|++++++||.||+.||
T Consensus        78 ~~~~~f~a~s~~~~~~Wi~ai~~a~  102 (109)
T d1wgqa_          78 MVFYVFKADDAHSTQRWIDAFQEGT  102 (109)
T ss_dssp             EEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             ceEEEEECCCHHHHHHHHHHHHHHh
Confidence             788866666666666666666655

>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositide phospholipase C, PLC-gamma-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.81  E-value=8.5e-20  Score=138.50  Aligned_cols=95  Identities=17%  Similarity=0.326  Sum_probs=81.7

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC-CCCCCceeEEEEeecCceEEEE
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS-KIEHPHSLQLTFMKDGSTRHIY  135 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~-~~~~~~~~~i~~~~~~~~R~~~  135 (321)
                      +|+|||+|+|+..++|++|||||.  ++.|.||++ ++..|+|.|+|.++.++..+. ..+++++|.|.. ...+.++|+
T Consensus         2 iK~G~L~k~~~~~k~W~kR~fvL~--~~~L~yy~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~f~i~~-~~~~~~~~~   78 (101)
T d2fjla1           2 IKNGILYLEDPVNHEWYPHYFVLT--SSKIYYSEETSSDLLRGVLDVPACQIAIRPEGKNNRLFVFSISM-PSVAQWSLD   78 (101)
T ss_dssp             CEEEEEEEEETTTTEEEEEEEEEE--TTEEEECCCCSCTCCCEEECSTTCEEEEETTCSSSCSCEEEEEC-TTTSSCCEE
T ss_pred             ceEEEEEEEcCCCCCCeEEEEEEE--CCEEEEEeccccceecceEEcCCceeEeeeeecccccceeEEec-cccccEEEE
Confidence            589999999999999999999999  899999999 899999999999997766554 445778888743 233458899


Q ss_pred             EEeCChHHHHHHHHHHHhhh
Q psy9639         136 VYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       136 l~a~s~~e~~~W~~aLr~a~  155 (321)
                      |+|+|++++.+|+.+|+.+.
T Consensus        79 ~~a~s~~e~~~Wi~ai~~~~   98 (101)
T d2fjla1          79 VAADSQEELQDWVKKIREVA   98 (101)
T ss_dssp             EEESSHHHHHHHHHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHHHHHH
Confidence            99999999999999999764

>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src kinase-associated phosphoprotein SKAP55 (SCAP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=4.3e-20  Score=141.06  Aligned_cols=97  Identities=22%  Similarity=0.439  Sum_probs=72.9

Q ss_pred             cceEEEEEEeCCCC---CCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCC-CCCCCCCCceEEEEeC
Q psy9639         179 FGREGWLWKTGPKN---ADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV-PPGAKDQGFTFTLKTP  254 (321)
Q Consensus       179 ~~k~G~L~K~g~~~---~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~-~~~~~~~~~~F~i~t~  254 (321)
                      ++|+|||+|++...   .+.|++|||+|+++.|+||+++.+..|.|.|+|..+    .+.... .......+|+|.|.++
T Consensus         1 vik~G~L~k~~~~~~~~~~~Wkkr~~vL~~~~L~y~~~~~~~~~~~~i~l~~~----~~~~~~~~~~~~~~~~~f~i~~~   76 (106)
T d1u5da1           1 VIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGY----SVRMAPHLRRDSKKESCFELTSQ   76 (106)
T ss_dssp             EEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTCSSCSEEEECTTC----EEEECGGGCSSGGGGGEEEEECS
T ss_pred             CeEEEEEEEECCCCCCCcCCcEEEEEEEECCEEEEEecccccccccccccCCc----eEeeccccccccCCceeEEEEcC
Confidence            57999999976532   357999999999999999999999999999999653    333321 1122245799999986


Q ss_pred             -CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         255 -QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       255 -~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                       +++|+|+|+|++|+++||+||+.+|
T Consensus        77 ~~~~~~f~a~s~~e~~~W~~ai~~~i  102 (106)
T d1u5da1          77 DRRTYEFTATSPAEARDWVDQISFLL  102 (106)
T ss_dssp             SSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEeCCHHHHHHHHHHHHHHH
Confidence             5899977766666666666666654

>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=8.9e-20  Score=151.64  Aligned_cols=100  Identities=19%  Similarity=0.220  Sum_probs=77.9

Q ss_pred             CcceEEEEEEeCCCC----CCCcceEEEEEeCCeeEeeeCCCCC----CcceeEEcccccCceEEecCCCCC--------
Q psy9639         178 DFGREGWLWKTGPKN----ADAYRKRWFTLDYRKLMYHEEPLSA----YPKGEIFLGHCSDGYTVRLGVPPG--------  241 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~----~~~WkkRwfvL~~~~L~Yyk~~~~~----~~~g~i~L~~~~~~~~V~~~~~~~--------  241 (321)
                      .++++|||.|++...    ..+||+|||||+++.|+||+++.+.    .++|.|+|..+.   .|.......        
T Consensus         2 ~vi~eG~L~Kr~~~k~k~~~~~WkrRwFVL~~~~L~Yyk~~~~~~~~~~~kG~I~L~~~~---~v~~~~~~~~~~~~~~~   78 (169)
T d1btka_           2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKIT---CVETVVPEKNPPPERQI   78 (169)
T ss_dssp             CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEE---EEEECCCCSSCCGGGCC
T ss_pred             cEEEEEEEEEecCCCCCcCcCCceEEEEEEECCEEeeeccccccccccCccceEeccceE---EEEeecccCCCCccccc
Confidence            478999999998753    1369999999999999999887654    478999997642   222211110        


Q ss_pred             ---------------CCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         242 ---------------AKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       242 ---------------~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                                     .....++|+|++++|+|+|+|+|++|+++||.+|+.+|.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~F~I~t~~rt~~l~A~s~eE~~~WI~aL~~~i~  132 (169)
T d1btka_          79 PRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIR  132 (169)
T ss_dssp             ---------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred             cccccccccccccccccccCcceEEEeCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence                           012458999999999999999999999999999999984

>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Grp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=3.2e-19  Score=140.32  Aligned_cols=117  Identities=26%  Similarity=0.450  Sum_probs=81.4

Q ss_pred             CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeE
Q psy9639         178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRW  257 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~  257 (321)
                      ++.|+|||+|+|... +.|++|||||+++.|.||+++.+..|.|.|+|..    +.|..+..   ...+++|.+..+...
T Consensus         4 np~keG~L~K~~~~~-k~WkrR~fvL~~~~L~yy~~~~~~~~~g~i~L~~----~~v~~~~~---~~~~~~~~~~~~~~~   75 (127)
T d1fgya_           4 NPDREGWLLKLGGRV-KTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLEN----LSIREVLD---PRKPNCFELYNPSHK   75 (127)
T ss_dssp             SCSEEEEEEEECSSS-CCEEEEEEEEETTEEEEESSTTCSSCSEEEECTT----CEEEEECC---SSCSSEEEEECSSST
T ss_pred             CCceEEEEEEECCCC-CCcEEEEEEEECCEEEEEccCCCccccceEeCCC----eEEEEccC---CCCCceEEEeccccc
Confidence            357999999999887 8999999999999999999999999999999964    44444321   134577877654311


Q ss_pred             EEEEcCCHHHHHHHHHHHhh-ccccccccCceEEEEecCCHHHHHHHHHHHHHhhcC
Q psy9639         258 YQFSALSAPDRDQWIQAVQT-GFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVLDT  313 (321)
Q Consensus       258 ~~f~A~s~~e~~~Wv~aL~~-ai~~~l~~~~~~~~l~a~s~~e~~~Wi~al~~~i~~  313 (321)
                      .....           .... ...+.+.++++.+.|+|+|++|+++|+.||+.+|.+
T Consensus        76 ~~~~~-----------~~~~~~~~~~~~~~~~~~~f~a~s~~e~~~Wi~aL~~~i~~  121 (127)
T d1fgya_          76 GQVIK-----------ACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR  121 (127)
T ss_dssp             TCCCC-----------CEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             ccccc-----------ccccccceeEeeCCCeEEEEECCCHHHHHHHHHHHHHHHcc
Confidence            00000           0000 002344556667778888888888888888888765

>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: 3-phosphoinositide dependent protein kinase-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=5.1e-20  Score=149.32  Aligned_cols=90  Identities=22%  Similarity=0.218  Sum_probs=73.4

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCe
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQR  256 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r  256 (321)
                      ..++|+|||+|+|+   ..|++|||+|+++.|.||+++.+..++|.|+|+.+   ..|..       ..+++|.|++++|
T Consensus        46 ~~ilK~G~L~Kr~~---~~wkkR~FvL~~~~L~YYkd~~~~~~kG~I~L~~~---~~v~~-------~~~~~F~I~t~~R  112 (147)
T d1w1ha_          46 NLILKMGPVDKRKG---LFARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQE---LRPEA-------KNFKTFFVHTPNR  112 (147)
T ss_dssp             CCEEEEEEEEECCT---TSCEEEEEEEETTTEEEEEETTTTEEEEEECCCTT---CEEEE-------EETTEEEEECSSC
T ss_pred             CeEEEEEEEEeecC---CcceEEEEEEcCCeeEEEeCCCcccccceEEeccc---ccccc-------ccCceEEEecCce
Confidence            35789999999874   46999999999999999999999999999999764   22322       2457899999999


Q ss_pred             EEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         257 WYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       257 ~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      +|+|+|++ .++++||.||+.++.
T Consensus       113 ty~l~a~~-~d~~~Wv~aI~~v~~  135 (147)
T d1w1ha_         113 TYYLMDPS-GNAHKWCRKIQEVWR  135 (147)
T ss_dssp             EEEEECTT-SCHHHHHHHHHHHHH
T ss_pred             EEEEEcCh-HHHHHHHHHHHHHHH
Confidence            99987754 567778888777664

>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.6e-19  Score=134.97  Aligned_cols=96  Identities=25%  Similarity=0.388  Sum_probs=70.7

Q ss_pred             cceEEEEEEeCCCCCCCcceEEEEEeCC--eeEeeeCCCCCCcceeEEcccccCceEEecCC---CCCCCCCCceEEEEe
Q psy9639         179 FGREGWLWKTGPKNADAYRKRWFTLDYR--KLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGV---PPGAKDQGFTFTLKT  253 (321)
Q Consensus       179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~--~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~---~~~~~~~~~~F~i~t  253 (321)
                      ++|+|||+|+++.. ++|++|||+|.++  .|+||+++.+..|.|.|++..+    .+....   ........++|.|.+
T Consensus         2 v~k~G~L~k~~~~~-k~WkkR~fvL~~~~~~l~~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~   76 (104)
T d2i5fa1           2 IIKQGCLLKQGHRR-KNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGC----VVTSVESNSNGRKSEEENLFEIIT   76 (104)
T ss_dssp             EEEEEEEEEECTTT-CCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTTC----EEEEECC--------CCSEEEEEC
T ss_pred             EEEEEEEEEECCCC-CCcEEEEEEEECCeeEEEEEcCccccCccceEeecce----EEEEeccCcccccccCccEEEEEC
Confidence            57999999999887 8999999999965  4566777888899999999653    333221   111223468999997


Q ss_pred             C-CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         254 P-QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       254 ~-~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      + +++|+|+|+|++|+.+||+||+.||
T Consensus        77 ~~~~~~~~~a~s~~e~~~W~~ai~~a~  103 (104)
T d2i5fa1          77 ADEVHYFLQAATPKERTEWIKAIQMAS  103 (104)
T ss_dssp             TTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence            6 5889988888777777777777765

>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Calcium-dependent activator protein for secretion, CAPS
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.9e-19  Score=139.98  Aligned_cols=100  Identities=23%  Similarity=0.308  Sum_probs=72.4

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCe--eEeeeCC--CCCCcceeEEcccccCceEEecCCCC-CCCCCCceEEE
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRK--LMYHEEP--LSAYPKGEIFLGHCSDGYTVRLGVPP-GAKDQGFTFTL  251 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~--L~Yyk~~--~~~~~~g~i~L~~~~~~~~V~~~~~~-~~~~~~~~F~i  251 (321)
                      ..+.++|||+|+|....+.|++|||||+++.  ++||+++  .+..++|.|++..    +.+....+. ......++|.|
T Consensus         6 ~~~~~~G~L~K~g~~~~k~WkkRwfvL~~~~~~~yy~~~~~~~~~~~~~~i~l~~----~~~~~~~~~~~~~~~~~~~~i   81 (126)
T d1wi1a_           6 SGMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDG----YTVDYTDPQPGLEGGRAFFNA   81 (126)
T ss_dssp             CCEEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCSSSSCCSEEEECSS----CEEEECCCCSSCCSCSSEEEE
T ss_pred             CCCcEEEEEEEECCCCCCCceEEEEEEeCCceEEEEEcccccccccceeeeeece----eeeeeccccccccccceeEEe
Confidence            3568999999998765479999999998553  4444443  4456899999954    333332222 22234577888


Q ss_pred             EeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         252 KTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       252 ~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      .+++|+|+|+|+|++|+++||+||+.|+.
T Consensus        82 ~~~~r~~~f~A~s~~e~~~Wv~al~~a~~  110 (126)
T d1wi1a_          82 VKEGDTVIFASDDEQDRILWVQAMYRATG  110 (126)
T ss_dssp             ECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             ccCCeEEEEEECCHHHHHHHHHHHHHHHH
Confidence            89999999888888888888888888774

>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho GTPase-activating protein 21
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=4.6e-19  Score=141.23  Aligned_cols=95  Identities=17%  Similarity=0.255  Sum_probs=70.3

Q ss_pred             ceEEEEEE---------eCCCCCCCcceEEEEEeCCeeEeeeCCCCC----CcceeEEcccccCceEEecCCCCCCCCCC
Q psy9639         180 GREGWLWK---------TGPKNADAYRKRWFTLDYRKLMYHEEPLSA----YPKGEIFLGHCSDGYTVRLGVPPGAKDQG  246 (321)
Q Consensus       180 ~k~G~L~K---------~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~----~~~g~i~L~~~~~~~~V~~~~~~~~~~~~  246 (321)
                      .|+|||++         +.+...+.|++|||+|+++.|+||+++.+.    .|.|.|+|.    +|.|....  ....++
T Consensus         2 ~KeG~L~~k~~~~~~~kk~~~~~k~Wkkr~fvL~~~~L~~y~~~~~~~~~~~~~~~i~L~----~~~v~~~~--~~~~r~   75 (133)
T d2j59m1           2 AKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVN----ACLIDISY--SETKRK   75 (133)
T ss_dssp             CEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTCC--------CEECS----SCEEEECS--SSCSCS
T ss_pred             CceEEEEeeccccccccccCCCCCCceEEEEEEeCCEEEEEeccccccccccccccceec----ceEEEEcc--cccccC
Confidence            58999984         332333689999999999999999987553    467889984    46665432  223578


Q ss_pred             ceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         247 FTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       247 ~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      |+|.|.+++++|+|+|+|++++++||.+|+.++.
T Consensus        76 ~~F~i~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~  109 (133)
T d2j59m1          76 NVFRLTTSDCECLFQAEDRDDMLAWIKTIQESSN  109 (133)
T ss_dssp             SEEEEECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred             ceeEEecCCCEEEEEeCCHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999874

>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.78  E-value=5.5e-19  Score=138.10  Aligned_cols=96  Identities=19%  Similarity=0.304  Sum_probs=72.9

Q ss_pred             hCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC
Q psy9639         175 LTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP  254 (321)
Q Consensus       175 ~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~  254 (321)
                      +..+++++|||.|+|+.....|++|||||.++.|+||+++.+  +.|.|+|..+   +.|....    ...+++|.|.++
T Consensus         6 ~~~~~i~eG~L~K~g~~~~~~WkkR~fvL~~~~L~yy~~~~~--~~~~i~l~~~---~~v~~~~----~~~~~~f~i~~~   76 (119)
T d1omwa2           6 LGKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGEA--PQSLLTMEEI---QSVEETQ----IKERKCLLLKIR   76 (119)
T ss_dssp             TTSCCCEEEEEEECC------CEEEEEEEETTEEEEECTTSC--CCEEEEGGGE---EEEEEEE----SSSCEEEEEEET
T ss_pred             cCCCeEEEEEEEEECCCCCCCeEEEEEEEEcCeEEEEecccc--cCccceeccc---ccccccc----ccccceEEEEcC
Confidence            456889999999999866567999999999999999998765  5678888654   4443321    235678888865


Q ss_pred             -CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         255 -QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       255 -~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                       +++|+|+|+|++++++||.||+.|+
T Consensus        77 ~~~~~~f~a~s~~e~~~W~~al~~a~  102 (119)
T d1omwa2          77 GGKQFVLQCDSDPELVQWKKELRDAY  102 (119)
T ss_dssp             TSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCHHHHHHHHHHHHHHH
Confidence             6999999999999999999998876

>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Phosphotyrosine-binding domain (PTB)
domain: Insulin receptor substrate 1, IRS-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=7.2e-19  Score=133.61  Aligned_cols=89  Identities=28%  Similarity=0.472  Sum_probs=68.9

Q ss_pred             CcceEEEEEEeCCCCCCCcceEEEEEeCC-------eeEeeeCC-----CCCCcceeEEcccccCceEEecCCCCCCCCC
Q psy9639         178 DFGREGWLWKTGPKNADAYRKRWFTLDYR-------KLMYHEEP-----LSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQ  245 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~-------~L~Yyk~~-----~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~  245 (321)
                      +++|+|||.|+     +.|++|||+|.+.       .|.||+++     .+..|.|.|+|..+   ..+...   .....
T Consensus         1 dv~k~GyL~K~-----k~WkkR~fvL~~~~~~~~~~~L~yy~~~~~~~~~~~~~~~~i~l~~~---~~~~~~---~~~~~   69 (103)
T d1qqga1           1 DVRKVGYLRKP-----KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESC---FNINKR---ADSKN   69 (103)
T ss_dssp             CEEEEEEEECT-----TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGE---EEEEEE---CCSSC
T ss_pred             CcceeEEEEEc-----CCCCEEEEEEecccccCCccEEEEEcchhhhhcccccccceEeccee---eEEeec---ccCCC
Confidence            47899999986     5799999999864       59999875     45668999999654   223222   22346


Q ss_pred             CceEEEEeCCeEEEEEcCCHHHHHHHHHHHhh
Q psy9639         246 GFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       246 ~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~  277 (321)
                      +++|.|.+++|+|+|+|+|++|+++||+||++
T Consensus        70 ~~~f~i~t~~r~~~l~A~s~~e~~~Wi~al~~  101 (103)
T d1qqga1          70 KHLVALYTRDEHFAIAADSEAEQDSWYQALLQ  101 (103)
T ss_dssp             SSEEEEEESSCEEEEECSSHHHHHHHHHHHHH
T ss_pred             ceEEEEEeCCeEEEEEcCCHHHHHHHHHHHHh
Confidence            79999999999999888888888888888865

>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=5.3e-19  Score=151.51  Aligned_cols=99  Identities=25%  Similarity=0.422  Sum_probs=74.7

Q ss_pred             CCcceEEEEEEeCCC---CCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCC-CCCCCCCceEEEE
Q psy9639         177 RDFGREGWLWKTGPK---NADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP-PGAKDQGFTFTLK  252 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~---~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~-~~~~~~~~~F~i~  252 (321)
                      ..++++|||.|++..   ..+.|++|||+|+++.|+||+++.+..|.|.|+|..    |.+..+.. .....++|||.|+
T Consensus       102 ~~~~k~G~L~K~~~~~~~~~~~Wkkr~fvL~~~~L~yy~~~~~~~~~~~i~L~~----~~~~~~~~~~~~~~~~~~F~i~  177 (209)
T d1u5ea1         102 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDG----YDVRMNNTLRKDGKKDCCFEIC  177 (209)
T ss_dssp             SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTCSSCSEEEECTT----CEEEECGGGCSSTTGGGEEEEE
T ss_pred             CCeeEEEEEEEecCCCCCccccceEEEEEEECCEEEEEecCCCCccceEEEecc----eeeeeccccccccCCCcEEEEE
Confidence            457899999998753   236899999999999999999999999999999954    44443221 1222457999999


Q ss_pred             eC-CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         253 TP-QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       253 t~-~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ++ +|+|+|+|+|+++++.||.||+.+|
T Consensus       178 ~~~~r~~~f~a~s~~e~~~Wi~al~~~i  205 (209)
T d1u5ea1         178 APDKRIYQFTAASPKDAEEWVQQLKFIL  205 (209)
T ss_dssp             CSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence            87 5899966666666666666666554

>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.1e-18  Score=130.63  Aligned_cols=95  Identities=21%  Similarity=0.399  Sum_probs=79.5

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC---CCCCCceeEEEEeecCce
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS---KIEHPHSLQLTFMKDGST  131 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~---~~~~~~~~~i~~~~~~~~  131 (321)
                      +..++|||+|+|+..++|++|||||.  ++.|.||++ .+..|+|.|+|..+..+..+.   ..+.++.|.+    .++.
T Consensus         2 ~vik~G~L~K~~~~~~~Wkkr~fvL~--~~~l~yy~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~i----~~~~   75 (103)
T d1eaza_           2 AVIKAGYCVKQGAVMKNWKRRYFQLD--ENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEI----VTTS   75 (103)
T ss_dssp             CCSEEEEEEEECTTTCCEEEEEEEEC--SSEEEEESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEE----ECSS
T ss_pred             ceEEEEEEEEECCCCCCeeEEEEEEE--CCEEEEEecccCcccceEEEccceEEeeccccccccccceEEEE----EeCC
Confidence            46799999999999999999999998  999999999 888999999999987654332   2234555544    3567


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      ++|+|+|+|++|+.+|+++|+.+..
T Consensus        76 ~~~~~~a~s~~e~~~W~~aI~~ai~  100 (103)
T d1eaza_          76 RTFYVQADSPEEMHSWIKAVSGAIV  100 (103)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998754

>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dedicator of cytokinesis protein 9, DOCK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.3e-18  Score=141.43  Aligned_cols=97  Identities=27%  Similarity=0.534  Sum_probs=75.7

Q ss_pred             CCCcceEEEEEEeCCCC-----CCCcceEEEEEeCC-----eeEeeeCC-CCCCcceeEEcccccCceEEecCCCCCCCC
Q psy9639         176 TRDFGREGWLWKTGPKN-----ADAYRKRWFTLDYR-----KLMYHEEP-LSAYPKGEIFLGHCSDGYTVRLGVPPGAKD  244 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~-----~~~WkkRwfvL~~~-----~L~Yyk~~-~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~  244 (321)
                      ...++|+|||+|++...     .+.|++|||||+++     .|.||+++ .+..|+|.|+|..+    .+...   ....
T Consensus        15 ~~~v~k~G~L~K~~~~~~~~~~~k~WkkR~fvL~~~~~~~~~L~yy~~~~~~~~~~g~i~l~~~----~~~~~---~~~~   87 (150)
T d1wg7a_          15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSC----MGVVQ---NNKV   87 (150)
T ss_dssp             SCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTC----CEECC---CCSS
T ss_pred             CCCEeEEEEEEEecCCCCcccccccceEEEEEEEcCcCCceeEEEEeccccccccccccccccc----ccccc---Cccc
Confidence            34689999999998654     25799999999854     47777765 46789999999653    33322   2235


Q ss_pred             CCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         245 QGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       245 ~~~~F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ++++|.|.++ .|+|+|+|+|++|++.||.||+.+|
T Consensus        88 ~~~~F~i~~~~~~~~~l~A~s~~e~~~Wi~aL~~~i  123 (150)
T d1wg7a_          88 RRFAFELKMQDKSSYLLAADSEVEMEEWITILNKIL  123 (150)
T ss_dssp             CTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             cceEEEEEcCCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence            6799999977 5899999999999999999999887

>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: DCC-interacting protein 13-alpha, APPL1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.9e-19  Score=135.73  Aligned_cols=92  Identities=13%  Similarity=0.200  Sum_probs=66.1

Q ss_pred             cceEEEEEEeCCC--CCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC--
Q psy9639         179 FGREGWLWKTGPK--NADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP--  254 (321)
Q Consensus       179 ~~k~G~L~K~g~~--~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~--  254 (321)
                      +.|+|||.|++..  ..+.|++|||+|+++.|+||+++. ..+.+.|+|.    +|+|....   ...+.+||.|+++  
T Consensus         5 ~~k~G~L~k~~~~g~~~k~W~kRwfvL~~~~L~y~~~~~-~~~~~~i~l~----~~~v~~~~---~~~~~~~f~i~~~~~   76 (101)
T d2elba2           5 TRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARGD-VAGGLAMDID----NCSVMAVD---CEDRRYCFQITSFDG   76 (101)
T ss_dssp             SCCEEEEEECSCCC----CCCEEEEEEETTEEEEECTTC-CCE----EEE----ECCCCCCC---CCCSSSSSEECCCSS
T ss_pred             ccEeEEEEEeccCCCCccccEEEEEEEeCCEEEEEccCC-cccceEEEec----cccccccc---ccCCcceEEEEeecc
Confidence            4689999998532  236899999999999999888764 4688999984    35554432   2356799999975  


Q ss_pred             CeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         255 QRWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       255 ~r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      .|+|+|+|+|++|+++||.||+++
T Consensus        77 ~~~~~l~A~s~~e~~~Wi~al~~v  100 (101)
T d2elba2          77 KKSSILQAESKKDHEEWICTINNI  100 (101)
T ss_dssp             SCCCCEECSSHHHHHHHHHHHHHT
T ss_pred             cceEEEECCCHHHHHHHHHHHHhc
Confidence            489998888888888888888765

>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dynamin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2e-18  Score=133.28  Aligned_cols=96  Identities=20%  Similarity=0.273  Sum_probs=79.5

Q ss_pred             cceeeEEEeecCC--CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEe-ccCCCCCCceeEEEEee----c
Q psy9639          57 GHMDGFLMKRGKE--SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVI-APSKIEHPHSLQLTFMK----D  128 (321)
Q Consensus        57 ~~~~G~L~K~g~~--~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~-~~~~~~~~~~~~i~~~~----~  128 (321)
                      .+++|||.|+++.  .++|++|||||.  ++.|.||++ ++..|+|.|+|.++.+.. .....+.+++|.+....    .
T Consensus         3 vik~GwL~k~~~~~~~~~WkkRwFvL~--~~~L~yyk~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~F~l~~~~~~~~~   80 (111)
T d2dyna_           3 VIRKGWLTINNIGIMKGGSKEYWFVLT--AENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVY   80 (111)
T ss_dssp             EEEEEEEEETTCCTTTTSSEEEEEEEE--SSEEEEESSTTCCCEEEEEECTTEEEEEECCCSTTCSEEEEEEESSCSCSB
T ss_pred             EEEEeeEEEECCCCCcCCceEEEEEEE--CCEEEEEcchhhcccccccccccceeEeeccccccccccEEeeeccccccc
Confidence            5789999999765  467999999999  899999999 899999999999986543 33355788888885321    2


Q ss_pred             CceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         129 GSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       129 ~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      +..|+++|+|+|.+|+.+|+.+|+.|
T Consensus        81 ~~~r~~~l~a~s~ed~~~W~~al~~A  106 (111)
T d2dyna_          81 KDYRQLELACETQEEVDSWKASFLRA  106 (111)
T ss_dssp             TTBSSEEEEESSHHHHHHHHHHHHHT
T ss_pred             cCceeEEEECCCHHHHHHHHHHHHHh
Confidence            45689999999999999999999876

>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=8e-18  Score=129.03  Aligned_cols=97  Identities=14%  Similarity=0.269  Sum_probs=84.9

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHI  134 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~  134 (321)
                      ...++|||+|+++..+.|++|||||.  ++.|.||++ .+..|++.|.|.++..+......+++|+|.|..   ...+.+
T Consensus         7 ~~~~~G~L~k~~~~~~~W~kr~~vL~--~~~L~~~k~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~---~~~~~~   81 (109)
T d1wgqa_           7 GSTMSGYLYRSKGSKKPWKHLWFVIK--NKVLYTYAASEDVAALESQPLLGFTVTLVKDENSESKVFQLLH---KGMVFY   81 (109)
T ss_dssp             SCSCEEEEEEESSTTSCCEEEEEEEE--TTEEEEESCTTCSSCSEEEECSSEEEEECCCSSCSSSEEEEEE---TTEEEE
T ss_pred             CCcEEEEEEEECCCCCCceEEEEEEe--CCEEEEeccccccccccccccceeeeeecccccccceeeeeec---ccceEE
Confidence            46899999999999999999999999  999999999 889999999999997766666677889998753   345889


Q ss_pred             EEEeCChHHHHHHHHHHHhhhhh
Q psy9639         135 YVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      +|+|++++++.+|+++|+.+...
T Consensus        82 ~f~a~s~~~~~~Wi~ai~~a~~~  104 (109)
T d1wgqa_          82 VFKADDAHSTQRWIDAFQEGTVS  104 (109)
T ss_dssp             EEECSSHHHHHHHHHHHHHHHSC
T ss_pred             EEECCCHHHHHHHHHHHHHHhcc
Confidence            99999999999999999988543

>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: KIAA1914
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.8e-18  Score=129.58  Aligned_cols=90  Identities=13%  Similarity=0.257  Sum_probs=72.2

Q ss_pred             ceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC-CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC-CeE
Q psy9639         180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS-AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP-QRW  257 (321)
Q Consensus       180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~-~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~-~r~  257 (321)
                      -++|||.|.+.   ..|++|||+|+++.|+||+++.+ ..|.|.|+|    .++.|....   ....+++|.+.++ +++
T Consensus         2 ~~s~yl~~~~~---~~WkkR~fvL~~~~L~yyk~~~~~~~~~~~i~l----~~~~v~~~~---~~~~~~~f~~~~~~~~~   71 (95)
T d2cofa1           2 ETSSYLNVLVN---SQWKSRWCSVRDNHLHFYQDRNRSKVAQQPLSL----VGCEVVPDP---SPDHLYSFRILHKGEEL   71 (95)
T ss_dssp             TTCCEEEEEET---TEEEEEEEEECSSCEEEECSSTTCSEEEEEECT----TTCEEECCC---BTTBSCEEEEEETTEEE
T ss_pred             CcccchhhhcC---CCceEEEEEEECCEEEEEecccccccccccccc----cceEEEecc---cccceecceecccccee
Confidence            35899999974   47999999999999999998754 457899998    456665432   2346789999865 689


Q ss_pred             EEEEcCCHHHHHHHHHHHhhcc
Q psy9639         258 YQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       258 ~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      |+|+|+|++|+++||.+|+.+.
T Consensus        72 ~~l~A~s~~e~~~Wi~~L~~~t   93 (95)
T d2cofa1          72 AKLEAKSSEEMGHWLGLLLSES   93 (95)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHS
T ss_pred             EEeeCCCHHHHHHHHHHHHHHh
Confidence            9999999999999999998765

>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac-alpha serine/threonine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=7.5e-19  Score=136.37  Aligned_cols=99  Identities=22%  Similarity=0.303  Sum_probs=72.9

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeC-CeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC-
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDY-RKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP-  254 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~-~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~-  254 (321)
                      ..++++|||+|+|... +.|++|||||.+ +.|+||+++.+..+.|.|+|..+........   ......+++|.|.+. 
T Consensus         5 ~~v~k~G~L~K~~~~~-k~Wk~RwfvL~~~~~l~~~~~~~~~~~~~~i~l~~~~~~~~~~~---~~~~~~~~~f~i~~~~   80 (118)
T d1unqa_           5 VAIVKEGWLHKRGEYI-KTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLM---KTERPRPNTFIIRCLQ   80 (118)
T ss_dssp             GCEEEEEEEEEECSSS-CCEEEEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECTTCEEE---EECSSSTTEEEEEEEE
T ss_pred             CCEEEEEEEEEECCCC-CCcEEEEEEEeccceeEEEeeccCccccccccccceEEeecccc---cccccCCceEEEEecc
Confidence            4789999999999887 899999999985 5788899888888889998865322111110   111245689999854 


Q ss_pred             ---CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         255 ---QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       255 ---~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                         .+.|+|+|+|++|+++||.||+.+|
T Consensus        81 ~~~~~~~~f~a~s~~e~~~Wi~ai~~~~  108 (118)
T d1unqa_          81 WTTVIERTFHVETPEEREEWTTAIQTVA  108 (118)
T ss_dssp             TTEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             ccceeEEEEEeCCHHHHHHHHHHHHHHH
Confidence               3678877777777777777777766

>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.3e-18  Score=133.00  Aligned_cols=102  Identities=25%  Similarity=0.328  Sum_probs=71.2

Q ss_pred             hCCCcceEEEEEEeCCCCCCCcceEEEEEeCCe--eEeee-CCCCCCcceeEEcccccCceEEecCCC---CCCCCCCce
Q psy9639         175 LTRDFGREGWLWKTGPKNADAYRKRWFTLDYRK--LMYHE-EPLSAYPKGEIFLGHCSDGYTVRLGVP---PGAKDQGFT  248 (321)
Q Consensus       175 ~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~--L~Yyk-~~~~~~~~g~i~L~~~~~~~~V~~~~~---~~~~~~~~~  248 (321)
                      ++.+++++|||.|+|... +.|++|||+|.+..  ++||. +..+..|.|.|+|..+.. ..+.....   .......++
T Consensus         7 ~~~~v~k~G~L~K~~~~~-k~WkkR~fvL~~~~~~~~~~~~~~~~~~p~~~i~L~~~~i-~~~~~~~~~~~~~~~~~~~~   84 (116)
T d1x1ga1           7 LSGTVVKQGYLAKQGHKR-KNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLV-SALEDNGVPTGVKGNVQGNL   84 (116)
T ss_dssp             TCSEEEEEEEEEEECSSS-SSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCC-EECCSSSSCSSCSSCCCSSC
T ss_pred             CCCCEEEEEEEEEEcCCC-CCCceEEEEEECCCcEEEEeccccccccceeEEEcCCCEE-EEecccCcccccccccccce
Confidence            466889999999999887 89999999998644  44453 345567999999976422 11211111   111234688


Q ss_pred             EEEEeC-CeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         249 FTLKTP-QRWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       249 F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      |.|+++ ++.|+|+|+|++|+++||+||+++
T Consensus        85 f~i~~~~~~~~~f~a~s~ee~~~Wi~ai~~~  115 (116)
T d1x1ga1          85 FKVITKDDTHYYIQASSKAERAEWIEAIKKL  115 (116)
T ss_dssp             EEECCTTCCCEEECCSSHHHHHHHHHHHHHH
T ss_pred             eEEEeCCCeEEEEECCCHHHHHHHHHHHHhh
Confidence            999986 578997777777777777777764

>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SH2 and PH domain-containing adapter protein APS
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=1.7e-18  Score=138.58  Aligned_cols=102  Identities=25%  Similarity=0.376  Sum_probs=75.0

Q ss_pred             CCCcceEEEEEEe-------CCCCCCCcceEEEEEeCC------eeEeeeCCCCCCcceeEEcccccCceEEecCCCCCC
Q psy9639         176 TRDFGREGWLWKT-------GPKNADAYRKRWFTLDYR------KLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGA  242 (321)
Q Consensus       176 ~~~~~k~G~L~K~-------g~~~~~~WkkRwfvL~~~------~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~  242 (321)
                      ..++.|+|||.++       ++...+.|++|||||+++      .|.||+++.+..|+|.|+|..+..   +..+.+...
T Consensus        15 ~~~v~keG~L~~~~~~~~~~~~~~~~~WkkrwfvL~~~~~~~~~~L~yy~~~~~~k~~g~i~l~~~~~---~~~~~~~~~   91 (136)
T d1v5ma_          15 LVDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAIIE---VRTTMPLEM   91 (136)
T ss_dssp             SCSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTTSSSCSSCEETTTCCB---CCCCCCSSS
T ss_pred             cceeeEEEEEEeeccccccCCCCCCCCceEEEEEEeCCcccchhhhhhhCcccccCcCcceeccccee---eeeeccccC
Confidence            4578899999753       222347899999999865      588999999999999999976533   222222333


Q ss_pred             CCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         243 KDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       243 ~~~~~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                      ..++|+|.|.+++ +.|+|+|+|++|+++||++|+.||.
T Consensus        92 ~~~~~~F~l~t~~~~~y~f~A~s~~e~~~Wv~ai~~ai~  130 (136)
T d1v5ma_          92 PEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVD  130 (136)
T ss_dssp             CCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHh
Confidence            4568999999986 5689777777777777777777663

>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Grp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=1.1e-17  Score=131.34  Aligned_cols=100  Identities=17%  Similarity=0.398  Sum_probs=79.9

Q ss_pred             ccccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEE-------
Q psy9639          54 YITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTF-------  125 (321)
Q Consensus        54 ~~~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~-------  125 (321)
                      |.+..++|||.|+|+..++|++|||||.  ++.|.||++ .+..|.|.|+|.++.++-.+. ...+++|++..       
T Consensus         2 ~~np~keG~L~K~~~~~k~WkrR~fvL~--~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~-~~~~~~~~~~~~~~~~~~   78 (127)
T d1fgya_           2 FFNPDREGWLLKLGGRVKTWKRRWFILT--DNCLYYFEYTTDKEPRGIIPLENLSIREVLD-PRKPNCFELYNPSHKGQV   78 (127)
T ss_dssp             CSSCSEEEEEEEECSSSCCEEEEEEEEE--TTEEEEESSTTCSSCSEEEECTTCEEEEECC-SSCSSEEEEECSSSTTCC
T ss_pred             CCCCceEEEEEEECCCCCCcEEEEEEEE--CCEEEEEccCCCccccceEeCCCeEEEEccC-CCCCceEEEecccccccc
Confidence            4567899999999999999999999999  999999999 999999999999985543322 23345544321       


Q ss_pred             -----------eecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         126 -----------MKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       126 -----------~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                                 ...++.++++|.|+|.+|+.+|+++|+++..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~f~a~s~~e~~~Wi~aL~~~i~  120 (127)
T d1fgya_          79 IKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS  120 (127)
T ss_dssp             CCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccceeEeeCCCeEEEEECCCHHHHHHHHHHHHHHHc
Confidence                       1224568899999999999999999998754

>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SET binding factor 1, Sbf1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=4.3e-18  Score=131.89  Aligned_cols=96  Identities=19%  Similarity=0.355  Sum_probs=76.1

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC-------CCCCCceeEEEEee
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS-------KIEHPHSLQLTFMK  127 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~-------~~~~~~~~~i~~~~  127 (321)
                      ...++|||+|+|...+.|++|||||...++.|.||++ .+..|+|.|.|.++..+....       .....+.|    ..
T Consensus         7 ~~~~eG~L~k~~~~~k~WkkR~fvL~~~~~~L~~~~~~~~~~p~g~i~l~~~~~v~~~~~~~~~~~~~~~~~~~----~~   82 (117)
T d1v5ua_           7 GRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFF----DV   82 (117)
T ss_dssp             SSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCE----EE
T ss_pred             CCeEEEEEEEECCCCCCceEEEEEEeCCCCEEEecccccccCcceEEEecceEEEeecccccccccccccceEE----Ee
Confidence            4578999999999999999999999754678999999 999999999999986543211       11122222    33


Q ss_pred             cCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         128 DGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       128 ~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      ..+.|+|+|+|+|++++.+|+.+|+.+.
T Consensus        83 ~~~~~~~~~~a~s~~e~~~Wv~~l~~ai  110 (117)
T d1v5ua_          83 KTTRRVYNFCAQDVPSAQQWVDRIQSCL  110 (117)
T ss_dssp             EESSCEEEEECSSHHHHHHHHHHHHTTC
T ss_pred             eCCCcEEEEEeCCHHHHHHHHHHHHHHH
Confidence            4456999999999999999999998663

>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho-GTPase-activating protein 25 (KIAA0053)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.2e-17  Score=129.57  Aligned_cols=99  Identities=13%  Similarity=0.200  Sum_probs=82.2

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEec--cCCCCCCceeEEEEeec----
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIA--PSKIEHPHSLQLTFMKD----  128 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~--~~~~~~~~~~~i~~~~~----  128 (321)
                      ...++|||+|+|+..++|++|||||.  ++.|.||.+ ++..|++.|+|.++.+...  ......+++|++.....    
T Consensus         7 ~~~k~G~L~K~~~~~k~WkkR~fvL~--~~~l~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~f~l~~~~~~~~~   84 (118)
T d1v89a_           7 GPIKMGWLKKQRSIVKNWQQRYFVLR--AQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNR   84 (118)
T ss_dssp             CEEEEEEEEEECSSSSCEEEEEEEEE--TTEEEEESSSSCCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCC
T ss_pred             CCeEEEEEEEECCCCCCcEEEEEEEE--CCEEEEecccCcccccceeccCceEEEEeccccccCCCcEEEEecCCCccee
Confidence            35789999999999999999999999  899999999 9999999999999865432  22445678888754332    


Q ss_pred             CceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         129 GSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       129 ~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      +..|+++|+|++++|+.+|+++|+++..
T Consensus        85 ~~~~~~~~~a~s~ee~~~Wi~aI~~a~~  112 (118)
T d1v89a_          85 MGQDSYVLMASSQAEMEEWVKFLRRVAG  112 (118)
T ss_dssp             SSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             cCCcEEEEEcCCHHHHHHHHHHHHHHHc
Confidence            3347899999999999999999998744

>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac-alpha serine/threonine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=4.5e-18  Score=131.86  Aligned_cols=101  Identities=17%  Similarity=0.277  Sum_probs=82.1

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEE---eccCCCCCCceeEEEEeecCce
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVV---IAPSKIEHPHSLQLTFMKDGST  131 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~---~~~~~~~~~~~~~i~~~~~~~~  131 (321)
                      +..++|||+|+|+..++|++|||||.. ++.|.||.+ .+..|+|.|+|..+...   ..+...+.+++|.+.....+..
T Consensus         6 ~v~k~G~L~K~~~~~k~Wk~RwfvL~~-~~~l~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~   84 (118)
T d1unqa_           6 AIVKEGWLHKRGEYIKTWRPRYFLLKN-DGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTV   84 (118)
T ss_dssp             CEEEEEEEEEECSSSCCEEEEEEEEET-TSEEEEESSCCCSHHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEETTEE
T ss_pred             CEEEEEEEEEECCCCCCcEEEEEEEec-cceeEEEeeccCccccccccccceEEeecccccccccCCceEEEEeccccce
Confidence            568999999999999999999999982 568888888 88888888888765432   1222346778999876666777


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      +.++|+|+|++++.+|+++|+.+...
T Consensus        85 ~~~~f~a~s~~e~~~Wi~ai~~~~~~  110 (118)
T d1unqa_          85 IERTFHVETPEEREEWTTAIQTVADG  110 (118)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence            88999999999999999999887543

>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Centaurin-delta 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.4e-17  Score=126.34  Aligned_cols=89  Identities=17%  Similarity=0.285  Sum_probs=75.9

Q ss_pred             ceeeEEEeecCCC-CCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639          58 HMDGFLMKRGKES-GKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY  135 (321)
Q Consensus        58 ~~~G~L~K~g~~~-~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~  135 (321)
                      +++|||.|+|+.. +.|++|||||.  ++.|.||++ .+..|.|+|+|.++..+..    .++++|.|.    ++.|+++
T Consensus         2 ik~G~L~K~~~~~~~~W~kr~fvL~--~~~L~~~~~~~~~~~~~~i~L~~~~~~~~----~~~~~f~i~----~~~~~~~   71 (102)
T d2coda1           2 VKSGWLDKLSPQGKRMFQKRWVKFD--GLSISYYNNEKEMYSKGIIPLSAISTVRV----QGDNKFEVV----TTQRTFV   71 (102)
T ss_dssp             CEEEEEEECCSSSSSCCEEEEEEEC--SSEEEEEESSCCSSCCCEEETTTEEEEEE----ETTTEEEEE----ESSCCEE
T ss_pred             cEEEEEEEECCCCCCCceEEEEEEE--CCEEEEEeccCcceeEEEEEchhceeecc----ccceeEEEE----cCCcEEE
Confidence            5899999999664 67999999998  999999999 9999999999999865432    356787764    3458899


Q ss_pred             EEeCChHHHHHHHHHHHhhhh
Q psy9639         136 VYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       136 l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      |+|+|.+++.+|+.+|+.+..
T Consensus        72 l~a~s~~e~~~Wi~ai~~~i~   92 (102)
T d2coda1          72 FRVEKEEERNDWISILLNALK   92 (102)
T ss_dssp             EECSSHHHHHHHHHHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHHHHHHH
Confidence            999999999999999987753

>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Signal-transducing adaptor protein 1, STAP-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.1e-17  Score=133.96  Aligned_cols=93  Identities=17%  Similarity=0.213  Sum_probs=78.9

Q ss_pred             cceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEecc-CCCCCCceeEEEEeecCceEEE
Q psy9639          57 GHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAP-SKIEHPHSLQLTFMKDGSTRHI  134 (321)
Q Consensus        57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~-~~~~~~~~~~i~~~~~~~~R~~  134 (321)
                      ..++|||.|+|+..++|++|||||+  +++|.||++ .+..|.|.|+|.++..+..+ ...+.+++|.|.    .++|+|
T Consensus        11 ~~~eG~L~k~~~~~k~WkkrwfvL~--~~~L~yY~~~~d~~~~~~i~L~~~~~~~~~~~~~~~~~~F~i~----~~~~~~   84 (136)
T d1x1fa1          11 LYFEGFLLIKRSGYREYEHYWTELR--GTTLFFYTDKKSIIYVDKLDIVDLTCLTEQNSTEKNCAKFTLV----LPKEEV   84 (136)
T ss_dssp             EEEEEEEEEECTTCCSCEEEEEEEE--TTEEEEESCSSCSSCSEECCCSSCCEEEECCCTTSCCCEEEEE----CSSCCE
T ss_pred             ccEEEEEEEECCCCCCeEEEEEEEc--CCEeEEEeecccccccccccccceeeeeeecccccccceeeec----CCCceE
Confidence            4689999999999999999999999  999999999 99999999999988655433 234556777664    456889


Q ss_pred             EEEeCChHHHHHHHHHHHhhh
Q psy9639         135 YVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       135 ~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      +|+|+|.+++.+|+++|+.+.
T Consensus        85 ~f~Aes~~e~~~Wi~~I~~v~  105 (136)
T d1x1fa1          85 QLKTENTESGEEWRGFILTVT  105 (136)
T ss_dssp             EEECSSHHHHHHHHHHHHHHH
T ss_pred             EEEeCCHHHHHHHHHHHHHHH
Confidence            999999999999999998764

>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositol 3-phosphate binding protein-1, PEPP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.3e-17  Score=125.54  Aligned_cols=96  Identities=16%  Similarity=0.300  Sum_probs=76.7

Q ss_pred             cccceeeEEEeecCC-CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC--CCCCCceeEEEEeecCc
Q psy9639          55 ITGHMDGFLMKRGKE-SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS--KIEHPHSLQLTFMKDGS  130 (321)
Q Consensus        55 ~~~~~~G~L~K~g~~-~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~--~~~~~~~~~i~~~~~~~  130 (321)
                      ....++|||.|+|+. .+.|++|||||.  ++.|.||.+ .+..|.+.|+|.++.++....  ..+.++.|.+.   ...
T Consensus         7 ~~~~~~G~L~k~~~~~~k~W~kr~~vL~--~~~L~~y~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~i~---~~~   81 (107)
T d1upqa_           7 LPVHIRGWLHKQDSSGLRLWKRRWFVLS--GHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAE---HPG   81 (107)
T ss_dssp             SCEEEEEEEEEECSSSSCCEEEEEEEEE--TTEEEEESSTTCCSCCEEEEGGGCEEEECCSSCTTSSSSEEEEE---CTT
T ss_pred             CceeEEEEEEEeCCCCCCCeeEEEEEEE--CCEEEEecCcccccccceecccceEEEEeccCcccCcceEEEEE---cCC
Confidence            346899999999865 577999999999  999999999 889999999999987654432  23344444432   344


Q ss_pred             eEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         131 TRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       131 ~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      .|+++|.|+|++++.+|+++|+.|.
T Consensus        82 ~~~~~~~a~s~~e~~~Wi~al~~A~  106 (107)
T d1upqa_          82 MRTYVLAADTLEDLRGWLRALGRAS  106 (107)
T ss_dssp             SCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEcCCHHHHHHHHHHHHHHh
Confidence            6889999999999999999998763

>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.1e-17  Score=127.40  Aligned_cols=96  Identities=18%  Similarity=0.279  Sum_probs=80.2

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC-CCCCCceeEEEEeecCceEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS-KIEHPHSLQLTFMKDGSTRH  133 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~-~~~~~~~~~i~~~~~~~~R~  133 (321)
                      ..+++|||.|+|+..++|++|||||.  ++.|.||++ .+..|.+.|+|.++..+..+. ....++.|.+.   .++.++
T Consensus         4 ~~ikeG~L~k~~~~~k~WkkryfvL~--~~~L~~y~~~~~~~p~~~i~l~~~~~~~~~~~~~~~~~~f~l~---~~~~~~   78 (113)
T d1plsa_           4 KRIREGYLVKKGSVFNTWKPMWVVLL--EDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKIT---TTKQQD   78 (113)
T ss_dssp             CCSEEEEEEEESSSSSCCEEEEEEEE--TTEEEEESSTTCSSCSEEEESSSCCEESSCCSSCCSSSEEEEE---ETTTEE
T ss_pred             CceEEEEEEEeCCCCCCceEEEEEEE--CCEEEEEecCCccccceEEECccCeEEeeecccCCcceEEEEe---cCCCeE
Confidence            46899999999999999999999999  899999999 899999999999996654432 33445566553   345689


Q ss_pred             EEEEeCChHHHHHHHHHHHhhhh
Q psy9639         134 IYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       134 ~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      |+|+|+|.+|+.+|+++|+.+..
T Consensus        79 ~~~~a~s~~e~~~Wi~ai~~ai~  101 (113)
T d1plsa_          79 HFFQAAFLEERDAWVRDINKAIK  101 (113)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999988744

>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Calcium-dependent activator protein for secretion, CAPS
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3.2e-17  Score=128.78  Aligned_cols=102  Identities=18%  Similarity=0.231  Sum_probs=71.1

Q ss_pred             ccceeeEEEeecCC-CCCceeeEEEEeccCCeEEeecC---CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCce
Q psy9639          56 TGHMDGFLMKRGKE-SGKYHPRRFVLNEINDTIKYYVK---EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGST  131 (321)
Q Consensus        56 ~~~~~G~L~K~g~~-~~~wk~R~fvL~~~~~~L~Yy~~---~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~  131 (321)
                      ...++|||+|+|+. .+.|++|||||...+..+.||.+   .+..|+|.|.|..+..+........... .+.|.+.+..
T Consensus         7 ~~~~~G~L~K~g~~~~k~WkkRwfvL~~~~~~~yy~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~-~~~~~i~~~~   85 (126)
T d1wi1a_           7 GMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGG-RAFFNAVKEG   85 (126)
T ss_dssp             CEEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCSSSSCCSEEEECSSCEEEECCCCSSCCSC-SSEEEEECSS
T ss_pred             CCcEEEEEEEECCCCCCCceEEEEEEeCCceEEEEEcccccccccceeeeeeceeeeeecccccccccc-ceeEEeccCC
Confidence            45789999999975 58999999999821223334433   4567899999999876543222111111 1113344567


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhhhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAKFHR  158 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~~~~  158 (321)
                      |+|+|+|+|++|+.+|+++|..+....
T Consensus        86 r~~~f~A~s~~e~~~Wv~al~~a~~~~  112 (126)
T d1wi1a_          86 DTVIFASDDEQDRILWVQAMYRATGQS  112 (126)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHHHTCS
T ss_pred             eEEEEEECCHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999998876543

>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=6.2e-17  Score=122.33  Aligned_cols=95  Identities=21%  Similarity=0.394  Sum_probs=72.9

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC-----CCCCCceeEEEEeecCce
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS-----KIEHPHSLQLTFMKDGST  131 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~-----~~~~~~~~~i~~~~~~~~  131 (321)
                      .|+|||+|+|+..++|++|||||......|.||.+ .+..|+|.|.+.++..+....     ....+++|.+   ..+..
T Consensus         3 ~k~G~L~k~~~~~k~WkkR~fvL~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~   79 (104)
T d2i5fa1           3 IKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEI---ITADE   79 (104)
T ss_dssp             EEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTTCEEEEECC--------CCSEEEE---ECTTC
T ss_pred             EEEEEEEEECCCCCCcEEEEEEEECCeeEEEEEcCccccCccceEeecceEEEEeccCcccccccCccEEEE---ECCCC
Confidence            68999999999999999999999832334556676 889999999999986654322     1223344443   34556


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      +.++|+|+|++|+.+|+++|+.|.
T Consensus        80 ~~~~~~a~s~~e~~~W~~ai~~a~  103 (104)
T d2i5fa1          80 VHYFLQAATPKERTEWIKAIQMAS  103 (104)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             eEEEEEcCCHHHHHHHHHHHHHHh
Confidence            889999999999999999998763

>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.70  E-value=1.7e-17  Score=130.42  Aligned_cols=98  Identities=17%  Similarity=0.379  Sum_probs=70.5

Q ss_pred             cceeeEEEeecCC-CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceE-----EEeccCCCCCCceeEEEEeecC
Q psy9639          57 GHMDGFLMKRGKE-SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELN-----VVIAPSKIEHPHSLQLTFMKDG  129 (321)
Q Consensus        57 ~~~~G~L~K~g~~-~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~-----~~~~~~~~~~~~~~~i~~~~~~  129 (321)
                      ..++|||+|++.. .+.|+||||||...++.|.||++ .+..|+|.|++..+.     .+..+ .........++|.+.+
T Consensus        15 ~~~~GyL~k~~~~~~k~WkrRwFvL~~~~~~L~yy~~~~~~~~~g~~~l~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~   93 (126)
T d1v5pa_          15 NRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIA-TPKQKPKTPFCFVINA   93 (126)
T ss_dssp             CCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEEC-CTTTSCSCSSEEEEEC
T ss_pred             CceeeeEEEECCCCCCCeeEEEEEEEcCCCeEEEeeccccccccceeecccceeeeeeccccc-cccccccccceEEEcC
Confidence            3689999999854 47899999999654789999999 777777666655442     21111 1111222223355567


Q ss_pred             ceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         130 STRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       130 ~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      +.|.|+|+|+|++|+.+|+++|+.|.
T Consensus        94 ~~r~~~l~Aes~~e~~~Wi~aL~~A~  119 (126)
T d1v5pa_          94 LSQRYFLQANDQKDLKDWVEALNQAS  119 (126)
T ss_dssp             SSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred             CCeeEEEECCCHHHHHHHHHHHHHHh
Confidence            78999999999999999999999763

>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.70  E-value=8.4e-17  Score=123.52  Aligned_cols=95  Identities=16%  Similarity=0.251  Sum_probs=77.6

Q ss_pred             cccceeeEEEeecCC----CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC---CCCCCceeEEEEe
Q psy9639          55 ITGHMDGFLMKRGKE----SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS---KIEHPHSLQLTFM  126 (321)
Q Consensus        55 ~~~~~~G~L~K~g~~----~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~---~~~~~~~~~i~~~  126 (321)
                      +...++|||+|+++.    .+.|++|||||.  ++.|.||++ .+..|+|.|+|.++..+....   ..+.+++|+|.  
T Consensus         7 ~~v~k~G~L~k~~~~~~~~~~~W~~r~~vL~--~~~L~~y~~~~~~~p~g~i~L~~~~~~~~~~~~~~~~~~~~f~i~--   82 (111)
T d1u5fa1           7 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALS--KTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEIC--   82 (111)
T ss_dssp             SSEEEEEEEEEECCCSSCSSCSEEEEEEEEE--TTEEEEESSTTCSSCSEEEECTTCEEEECTTSCSSTTGGGEEEEE--
T ss_pred             CCeeEEEEEEEECCCCCCCcCCceEEEEEEE--CCEEEeeccccccCcceEEEecccEEEeeccccccccccceEEEE--
Confidence            356899999999764    357999999999  999999999 899999999999987654322   23456777764  


Q ss_pred             ecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         127 KDGSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       127 ~~~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                       ..+.|.|+|+|+|++|+.+|+++|+.+
T Consensus        83 -~~~~~~~~~~a~s~~e~~~W~~ai~~~  109 (111)
T d1u5fa1          83 -APDKRIYQFTAASPKDAEEWVQQLKFI  109 (111)
T ss_dssp             -CTTSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred             -ccCCcEEEEEcCCHHHHHHHHHHHHHH
Confidence             234589999999999999999999864

>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=4.7e-17  Score=128.43  Aligned_cols=97  Identities=14%  Similarity=0.144  Sum_probs=74.4

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEe--------
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFM--------  126 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~--------  126 (321)
                      ...++|||.|+| ..++|++|||||.  ++.|.||++ .+..|+|.|.|..+.++..+. ..++++|+|...        
T Consensus         7 ~~~~~GwLkk~~-~~k~WkkRwfvL~--~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~-~~~~~~f~i~~~~~~~~~~~   82 (130)
T d1v88a_           7 GIVMADWLKIRG-TLKSWTKLWCVLK--PGVLLIYKTQKNGQWVGTVLLNACEIIERPS-KKDGFCFKLFHPLEQSIWAV   82 (130)
T ss_dssp             SCCEEEEEEECC-SSSSCEEEEEEEE--TTEEEEESCSSSCCCCEEEECSSCEECCCCT-TTSSCEEEEECTTCCCCSCS
T ss_pred             CCeEeCeEEeCC-CCCCceEEEEEEe--CCEEEEEcCCCCCcceeEEECCCeEEEEccc-cCCCceEEEEcCCCcceecc
Confidence            357899997666 4688999999999  999999999 889999999999986544433 234566665321        


Q ss_pred             ------------ecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         127 ------------KDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       127 ------------~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                                  .....+.++|+|+|++|+.+|+++|+.+..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~l~A~s~~e~~~Wi~al~~~i~  124 (130)
T d1v88a_          83 KGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALK  124 (130)
T ss_dssp             SCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred             cCcccccceeEEecCCcEEEEEECCCHHHHHHHHHHHHHHhh
Confidence                        112235578999999999999999987743

>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Mouse (Mus musculus), brain [TaxId: 10090]

Probab=99.69  E-value=8.5e-17  Score=122.37  Aligned_cols=92  Identities=16%  Similarity=0.320  Sum_probs=69.0

Q ss_pred             eEEEEEEeCC-------CCCCCcceEEEEEeCCeeEeeeCCCC------CCcceeEEcccccCceEEecCCCCCCCCCCc
Q psy9639         181 REGWLWKTGP-------KNADAYRKRWFTLDYRKLMYHEEPLS------AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGF  247 (321)
Q Consensus       181 k~G~L~K~g~-------~~~~~WkkRwfvL~~~~L~Yyk~~~~------~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~  247 (321)
                      ++|||++++.       ...+.|++|||+|+++.|+||+++.+      ..+.+.|+|.    ++.+....  +...+++
T Consensus         1 ~eG~L~rk~~~~~~~kk~~~~~Wk~r~~vL~~~~L~~yk~~~~~~~~~~~~~~~~i~l~----~~~~~~~~--~~~~~~~   74 (106)
T d1btna_           1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLK----EAICEVAL--DYKKKKH   74 (106)
T ss_dssp             CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECT----TCEEEECS--SCCSSSS
T ss_pred             CeeeEEEeeEccCCCcccCCCCCcEEEEEEECCEEEEEeChhhcccccccCcceeEEec----cceeeecc--ccccCcc
Confidence            4899998731       12257999999999999999998643      4467778884    34454432  2234679


Q ss_pred             eEEEEeC-CeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639         248 TFTLKTP-QRWYQFSALSAPDRDQWIQAVQTG  278 (321)
Q Consensus       248 ~F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~a  278 (321)
                      +|.|.++ +++|+|+|+|++++++||+||+.|
T Consensus        75 ~f~i~~~~~~~~~~~a~s~~e~~~W~~ai~~A  106 (106)
T d1btna_          75 VFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA  106 (106)
T ss_dssp             EEEEECTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred             eEeecccCCCEEEEECCCHHHHHHHHHHHHhC
Confidence            9999986 589998888888888888888865

>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Human (Homo sapiens), brain 2 isoform [TaxId: 9606]

Probab=99.68  E-value=1.2e-17  Score=130.56  Aligned_cols=100  Identities=13%  Similarity=0.167  Sum_probs=66.3

Q ss_pred             CcceEEEEEEeCC-------CCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEccccc--CceEEecCCCCCCCCCCce
Q psy9639         178 DFGREGWLWKTGP-------KNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCS--DGYTVRLGVPPGAKDQGFT  248 (321)
Q Consensus       178 ~~~k~G~L~K~g~-------~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~--~~~~V~~~~~~~~~~~~~~  248 (321)
                      ...++|||.++..       ...+.|++|||+|+++.|+||+++.+..+.+.+.+....  ..+.+....  +...++|+
T Consensus         7 g~~~eG~L~rk~~~~~~~kr~~~k~Wkkrw~vL~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~   84 (123)
T d1wjma_           7 GEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAF--DYRKRKHV   84 (123)
T ss_dssp             CCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECT--TCSSCSSE
T ss_pred             CCeeEEEEEEEeeccccCcccCCCCCcEEEEEEECCEEEEEecchhccccccccccccccccceeEEecc--cccccCcE
Confidence            4578999997642       123689999999999999999886544443333221110  223444322  23357799


Q ss_pred             EEEEeC-CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         249 FTLKTP-QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       249 F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      |.|.+. .++|+|+|+|++++++||+||+.||
T Consensus        85 f~i~~~~~~~~~l~a~s~~e~~~Wi~aI~~a~  116 (123)
T d1wjma_          85 FKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAI  116 (123)
T ss_dssp             EEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence            999975 6899977777777777777776665

>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 3, FGD3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2.4e-16  Score=118.21  Aligned_cols=91  Identities=9%  Similarity=0.161  Sum_probs=72.3

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCC---eEEeecC-CCCCceeEEeccceEEEeccC--CCCCCceeEEEEeecCce
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEIND---TIKYYVK-EKKEPKATLRISELNVVIAPS--KIEHPHSLQLTFMKDGST  131 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~---~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~--~~~~~~~~~i~~~~~~~~  131 (321)
                      .+.|||.++.+ .++|++|||||.  ++   .|.||++ .+..|+|.|+|.++.++....  ....+++|++    .+++
T Consensus         2 ~~~G~L~~~~~-~k~W~krwfvL~--~~~~~~ly~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~F~i----~~~~   74 (99)
T d2coca1           2 LLCGPLRLSES-GETWSEVWAAIP--MSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDPEERLDSGHVWKL----QWAK   74 (99)
T ss_dssp             SSEEEEEEESS-SSCEEEEEEECC--TTCTTCEEEECCTTCSSSCSEECGGGCEEECCCSSSCCSSSEEEEE----EETT
T ss_pred             ceEEEEEccCC-CCCccEEEEEEe--cCCccEEEEECcCccccccccccccceeeeecccccccCCceEEEE----EcCC
Confidence            46899999975 478999999998  44   5788888 899999999999986543322  2345556655    3456


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      |+|+|.|+|++++.+|+++|+.|.
T Consensus        75 r~~~l~A~s~~e~~~Wi~aL~~Aa   98 (99)
T d2coca1          75 QSWYLSASSAELQQQWLETLSTAA   98 (99)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             cEEEEECCCHHHHHHHHHHHHHhc
Confidence            999999999999999999998764

>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.3e-16  Score=132.11  Aligned_cols=95  Identities=16%  Similarity=0.335  Sum_probs=73.2

Q ss_pred             ccceeeEEEeecCCCC-----CceeeEEEEeccCCeEEeecC-CC----CCceeEEeccceEEEeccC-C----------
Q psy9639          56 TGHMDGFLMKRGKESG-----KYHPRRFVLNEINDTIKYYVK-EK----KEPKATLRISELNVVIAPS-K----------  114 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~-----~wk~R~fvL~~~~~~L~Yy~~-~~----~~pkg~I~l~~~~~~~~~~-~----------  114 (321)
                      +..++|||+|+|+..+     +|++|||||.  ++.|.||++ .+    ..|+|.|.|.++..+.... .          
T Consensus         2 ~vi~eG~L~Kr~~~k~k~~~~~WkrRwFVL~--~~~L~Yyk~~~~~~~~~~~kG~I~L~~~~~v~~~~~~~~~~~~~~~~   79 (169)
T d1btka_           2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLT--VHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIP   79 (169)
T ss_dssp             CCCEEEEEEEECCCSSTTCCCCEEEEEEEEC--SSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC-
T ss_pred             cEEEEEEEEEecCCCCCcCcCCceEEEEEEE--CCEEeeeccccccccccCccceEeccceEEEEeecccCCCCcccccc
Confidence            4689999999997543     6999999998  899999987 44    3589999999986643211 0          


Q ss_pred             ---------------CCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         115 ---------------IEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       115 ---------------~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                                     ...++.|+|    .+..|+|||+|+|++|+.+|+++|+.+..
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~F~I----~t~~rt~~l~A~s~eE~~~WI~aL~~~i~  132 (169)
T d1btka_          80 RRGEESSEMEQISIIERFPYPFQV----VYDEGPLYVFSPTEELRKRWIHQLKNVIR  132 (169)
T ss_dssp             --------CCTTHHHHCCCEEEEE----EETTCCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred             ccccccccccccccccccCcceEE----EeCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence                           012344444    34569999999999999999999998754

>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src kinase-associated phosphoprotein SKAP55 (SCAP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.4e-16  Score=121.21  Aligned_cols=93  Identities=23%  Similarity=0.392  Sum_probs=75.7

Q ss_pred             ceeeEEEeecCCC----CCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC---CCCCCceeEEEEeecC
Q psy9639          58 HMDGFLMKRGKES----GKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS---KIEHPHSLQLTFMKDG  129 (321)
Q Consensus        58 ~~~G~L~K~g~~~----~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~---~~~~~~~~~i~~~~~~  129 (321)
                      .++|||.|+++..    ++|++|||||.  ++.|.||++ .+..|.|+|+|.++.....+.   ....+|+|.|.   ..
T Consensus         2 ik~G~L~k~~~~~~~~~~~Wkkr~~vL~--~~~L~y~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~i~---~~   76 (106)
T d1u5da1           2 IKQGYLEKKSKDHSFFGSEWQKRWCVVS--RGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELT---SQ   76 (106)
T ss_dssp             EEEEEEEEEEECSSSSCEEEEEEEEEEE--TTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEE---CS
T ss_pred             eEEEEEEEECCCCCCCcCCcEEEEEEEE--CCEEEEEecccccccccccccCCceEeeccccccccCCceeEEEE---cC
Confidence            5899999988643    46999999999  999999999 899999999999986654332   23466777764   22


Q ss_pred             ceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         130 STRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       130 ~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      +.++++|+|+|++++.+|+++|+.+.
T Consensus        77 ~~~~~~f~a~s~~e~~~W~~ai~~~i  102 (106)
T d1u5da1          77 DRRTYEFTATSPAEARDWVDQISFLL  102 (106)
T ss_dssp             SSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEeCCHHHHHHHHHHHHHHH
Confidence            34889999999999999999998764

>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho GTPase-activating protein 21
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.9e-16  Score=124.63  Aligned_cols=92  Identities=16%  Similarity=0.305  Sum_probs=69.0

Q ss_pred             ceeeEEEe----------ecCCCCCceeeEEEEeccCCeEEeecC-CC----CCceeEEeccceEEEeccCCCCCCceeE
Q psy9639          58 HMDGFLMK----------RGKESGKYHPRRFVLNEINDTIKYYVK-EK----KEPKATLRISELNVVIAPSKIEHPHSLQ  122 (321)
Q Consensus        58 ~~~G~L~K----------~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~----~~pkg~I~l~~~~~~~~~~~~~~~~~~~  122 (321)
                      .|+|||.+          .|...++|++|||||.  ++.|.||++ .+    ..|.+.|+|.++.+...+...+++|+|.
T Consensus         2 ~KeG~L~~k~~~~~~~kk~~~~~k~Wkkr~fvL~--~~~L~~y~~~~~~~~~~~~~~~i~L~~~~v~~~~~~~~r~~~F~   79 (133)
T d2j59m1           2 AKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLR--GHSLYLYKDKREQTTPSEEEQPISVNACLIDISYSETKRKNVFR   79 (133)
T ss_dssp             CEEEEEEEEECC------------CCEEEEEEEE--TTEEEEESCTTCC--------CEECSSCEEEECSSSCSCSSEEE
T ss_pred             CceEEEEeeccccccccccCCCCCCceEEEEEEe--CCEEEEEeccccccccccccccceecceEEEEcccccccCceeE
Confidence            68999984          4445578999999999  999999987 33    3688999999987666666677888887


Q ss_pred             EEEeecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         123 LTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       123 i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      |.    ++.|+|+|.|+|++++.+|+.+|+.+.
T Consensus        80 i~----~~~~~~~f~A~s~~e~~~Wi~ai~~a~  108 (133)
T d2j59m1          80 LT----TSDCECLFQAEDRDDMLAWIKTIQESS  108 (133)
T ss_dssp             EE----CSSCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred             Ee----cCCCEEEEEeCCHHHHHHHHHHHHHHH
Confidence            75    455889999999999999999998763

>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.9e-16  Score=121.98  Aligned_cols=96  Identities=21%  Similarity=0.357  Sum_probs=73.2

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC--CCCCceeEEeccceEEEeccC--------CCCCCceeEEEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK--EKKEPKATLRISELNVVIAPS--------KIEHPHSLQLTF  125 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~--~~~~pkg~I~l~~~~~~~~~~--------~~~~~~~~~i~~  125 (321)
                      ...++|||.|+|...+.|++|||+|..++..+.||..  .+..|+|.|+|.++.+...+.        ....++.|.+. 
T Consensus        10 ~v~k~G~L~K~~~~~k~WkkR~fvL~~~~~~~~~~~~~~~~~~p~~~i~L~~~~i~~~~~~~~~~~~~~~~~~~~f~i~-   88 (116)
T d1x1ga1          10 TVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVI-   88 (116)
T ss_dssp             EEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEEC-
T ss_pred             CEEEEEEEEEEcCCCCCCceEEEEEECCCcEEEEeccccccccceeEEEcCCCEEEEecccCcccccccccccceeEEE-
Confidence            4579999999999999999999999843445666654  678999999999986544322        11234455542 


Q ss_pred             eecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         126 MKDGSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       126 ~~~~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                        ..+.|.|+|+|+|++++.+|++||+.+
T Consensus        89 --~~~~~~~~f~a~s~ee~~~Wi~ai~~~  115 (116)
T d1x1ga1          89 --TKDDTHYYIQASSKAERAEWIEAIKKL  115 (116)
T ss_dssp             --CTTCCCEEECCSSHHHHHHHHHHHHHH
T ss_pred             --eCCCeEEEEECCCHHHHHHHHHHHHhh
Confidence              445688999999999999999999864

>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dedicator of cytokinesis protein 9, DOCK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.6e-16  Score=127.54  Aligned_cols=97  Identities=15%  Similarity=0.270  Sum_probs=76.2

Q ss_pred             ccceeeEEEeecCCC------CCceeeEEEEecc---CCeEEeecC--CCCCceeEEeccceEEEeccCCCCCCceeEEE
Q psy9639          56 TGHMDGFLMKRGKES------GKYHPRRFVLNEI---NDTIKYYVK--EKKEPKATLRISELNVVIAPSKIEHPHSLQLT  124 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~------~~wk~R~fvL~~~---~~~L~Yy~~--~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~  124 (321)
                      ...++|||+|+|...      +.|++|||||...   ...|.||.+  .+..|+|+|.|..+..+..+ ...++++|.|.
T Consensus        17 ~v~k~G~L~K~~~~~~~~~~~k~WkkR~fvL~~~~~~~~~L~yy~~~~~~~~~~g~i~l~~~~~~~~~-~~~~~~~F~i~   95 (150)
T d1wg7a_          17 GITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQN-NKVRRFAFELK   95 (150)
T ss_dssp             CCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTCCEECCC-CSSCTTEEEEE
T ss_pred             CEeEEEEEEEecCCCCcccccccceEEEEEEEcCcCCceeEEEEeccccccccccccccccccccccC-ccccceEEEEE
Confidence            358999999998654      4799999999832   125888877  67899999999998664443 34677888874


Q ss_pred             EeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         125 FMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       125 ~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      +   ...|+|+|+|+|++++.+|+.+|+.+..
T Consensus        96 ~---~~~~~~~l~A~s~~e~~~Wi~aL~~~i~  124 (150)
T d1wg7a_          96 M---QDKSSYLLAADSEVEMEEWITILNKILQ  124 (150)
T ss_dssp             C---SSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             c---CCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence            2   3358999999999999999999987743

>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.65  E-value=5e-16  Score=120.89  Aligned_cols=94  Identities=18%  Similarity=0.362  Sum_probs=69.5

Q ss_pred             cceeeEEEeecCCC-CCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639          57 GHMDGFLMKRGKES-GKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY  135 (321)
Q Consensus        57 ~~~~G~L~K~g~~~-~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~  135 (321)
                      .+++|||+|+|+.. ..|++|||||.  ++.|.||++ +..+++.|.|..+..+-. ......++|.+.   ....++|+
T Consensus        10 ~i~eG~L~K~g~~~~~~WkkR~fvL~--~~~L~yy~~-~~~~~~~i~l~~~~~v~~-~~~~~~~~f~i~---~~~~~~~~   82 (119)
T d1omwa2          10 CIMHGYMSKMGNPFLTQWQRRYFYLF--PNRLEWRGE-GEAPQSLLTMEEIQSVEE-TQIKERKCLLLK---IRGGKQFV   82 (119)
T ss_dssp             CCEEEEEEECC------CEEEEEEEE--TTEEEEECT-TSCCCEEEEGGGEEEEEE-EESSSCEEEEEE---ETTSCEEE
T ss_pred             eEEEEEEEEECCCCCCCeEEEEEEEE--cCeEEEEec-ccccCccceecccccccc-ccccccceEEEE---cCCCcEEE
Confidence            57899999999764 55999999999  999999988 223567899988755432 223455666553   23458899


Q ss_pred             EEeCChHHHHHHHHHHHhhhhh
Q psy9639         136 VYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       136 l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      |+|+|.+++.+|+++|+.+...
T Consensus        83 f~a~s~~e~~~W~~al~~a~~~  104 (119)
T d1omwa2          83 LQCDSDPELVQWKKELRDAYRE  104 (119)
T ss_dssp             EECSSHHHHHHHHHHHHHHHHH
T ss_pred             EECCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999887543

>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: KIAA1914
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=3.5e-16  Score=116.83  Aligned_cols=89  Identities=13%  Similarity=0.269  Sum_probs=72.9

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC--CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK--EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY  135 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~--~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~  135 (321)
                      .++|||.|.+.  +.|++|||||.  ++.|.||++  .+..|++.|.|.++.++..+ ..+++++|.+.   ....|+|+
T Consensus         2 ~~s~yl~~~~~--~~WkkR~fvL~--~~~L~yyk~~~~~~~~~~~i~l~~~~v~~~~-~~~~~~~f~~~---~~~~~~~~   73 (95)
T d2cofa1           2 ETSSYLNVLVN--SQWKSRWCSVR--DNHLHFYQDRNRSKVAQQPLSLVGCEVVPDP-SPDHLYSFRIL---HKGEELAK   73 (95)
T ss_dssp             TTCCEEEEEET--TEEEEEEEEEC--SSCEEEECSSTTCSEEEEEECTTTCEEECCC-BTTBSCEEEEE---ETTEEEEE
T ss_pred             CcccchhhhcC--CCceEEEEEEE--CCEEEEEecccccccccccccccceEEEecc-cccceecceec---cccceeEE
Confidence            36899999984  67999999998  999999988  55678999999998654433 34566777653   35569999


Q ss_pred             EEeCChHHHHHHHHHHHhh
Q psy9639         136 VYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       136 l~a~s~~e~~~W~~aLr~a  154 (321)
                      |.|+|.+++.+|+.+|+.+
T Consensus        74 l~A~s~~e~~~Wi~~L~~~   92 (95)
T d2cofa1          74 LEAKSSEEMGHWLGLLLSE   92 (95)
T ss_dssp             EECSSHHHHHHHHHHHHHH
T ss_pred             eeCCCHHHHHHHHHHHHHH
Confidence            9999999999999999875

>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Phosphotyrosine-binding domain (PTB)
domain: Insulin receptor substrate 1, IRS-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=5.6e-16  Score=117.24  Aligned_cols=89  Identities=20%  Similarity=0.366  Sum_probs=70.9

Q ss_pred             cceeeEEEeecCCCCCceeeEEEEeccC-----CeEEeecC------CCCCceeEEeccceEEEeccCCCCCCceeEEEE
Q psy9639          57 GHMDGFLMKRGKESGKYHPRRFVLNEIN-----DTIKYYVK------EKKEPKATLRISELNVVIAPSKIEHPHSLQLTF  125 (321)
Q Consensus        57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~-----~~L~Yy~~------~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~  125 (321)
                      ..++|||.|+    ++|++|||||....     ..|.||++      .+..|+|.|+|..+..+..+.....+++|+|. 
T Consensus         2 v~k~GyL~K~----k~WkkR~fvL~~~~~~~~~~~L~yy~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~f~i~-   76 (103)
T d1qqga1           2 VRKVGYLRKP----KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRADSKNKHLVALY-   76 (103)
T ss_dssp             EEEEEEEECT----TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECCSSCSSEEEEE-
T ss_pred             cceeEEEEEc----CCCCEEEEEEecccccCCccEEEEEcchhhhhcccccccceEecceeeEEeecccCCCceEEEEE-
Confidence            4689999987    47999999998311     25999986      34678999999998665555555667787764 


Q ss_pred             eecCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639         126 MKDGSTRHIYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       126 ~~~~~~R~~~l~a~s~~e~~~W~~aLr~  153 (321)
                         +..|+|+|+|+|++|+.+|+.+|+.
T Consensus        77 ---t~~r~~~l~A~s~~e~~~Wi~al~~  101 (103)
T d1qqga1          77 ---TRDEHFAIAADSEAEQDSWYQALLQ  101 (103)
T ss_dssp             ---ESSCEEEEECSSHHHHHHHHHHHHH
T ss_pred             ---eCCeEEEEEcCCHHHHHHHHHHHHh
Confidence               3459999999999999999999985

>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: DCC-interacting protein 13-alpha, APPL1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.4e-16  Score=120.54  Aligned_cols=93  Identities=14%  Similarity=0.205  Sum_probs=68.1

Q ss_pred             cceeeEEEeecC---CCCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEE
Q psy9639          57 GHMDGFLMKRGK---ESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRH  133 (321)
Q Consensus        57 ~~~~G~L~K~g~---~~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~  133 (321)
                      ..++|||.|+++   ..+.|++|||||.  ++.|.||+..+..|.+.|+|..+.+...+ ..+..++|+|.  ..++.|+
T Consensus         5 ~~k~G~L~k~~~~g~~~k~W~kRwfvL~--~~~L~y~~~~~~~~~~~i~l~~~~v~~~~-~~~~~~~f~i~--~~~~~~~   79 (101)
T d2elba2           5 TRKAGYLNARNKTGLVSSTWDRQFYFTQ--GGNLMSQARGDVAGGLAMDIDNCSVMAVD-CEDRRYCFQIT--SFDGKKS   79 (101)
T ss_dssp             SCCEEEEEECSCCC----CCCEEEEEEE--TTEEEEECTTCCCE----EEEECCCCCCC-CCCSSSSSEEC--CCSSSCC
T ss_pred             ccEeEEEEEeccCCCCccccEEEEEEEe--CCEEEEEccCCcccceEEEeccccccccc-ccCCcceEEEE--eecccce
Confidence            468999999854   3467999999999  89999988877789999999776443222 34567788874  2334588


Q ss_pred             EEEEeCChHHHHHHHHHHHhh
Q psy9639         134 IYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       134 ~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      ++|+|+|.+|+.+|+.||+.+
T Consensus        80 ~~l~A~s~~e~~~Wi~al~~v  100 (101)
T d2elba2          80 SILQAESKKDHEEWICTINNI  100 (101)
T ss_dssp             CCEECSSHHHHHHHHHHHHHT
T ss_pred             EEEECCCHHHHHHHHHHHHhc
Confidence            999999999999999999864

>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: 3-phosphoinositide dependent protein kinase-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=4.1e-16  Score=125.96  Aligned_cols=88  Identities=17%  Similarity=0.147  Sum_probs=71.3

Q ss_pred             cceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639          57 GHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY  135 (321)
Q Consensus        57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~  135 (321)
                      ..|+|||+|+|+  ..|++|||||.  ++.|.||++ .+..|+|.|+|+.+..+-    ...+++|.|    .++.|+|+
T Consensus        48 ilK~G~L~Kr~~--~~wkkR~FvL~--~~~L~YYkd~~~~~~kG~I~L~~~~~v~----~~~~~~F~I----~t~~Rty~  115 (147)
T d1w1ha_          48 ILKMGPVDKRKG--LFARRRQLLLT--EGPHLYYVDPVNKVLKGEIPWSQELRPE----AKNFKTFFV----HTPNRTYY  115 (147)
T ss_dssp             EEEEEEEEECCT--TSCEEEEEEEE--TTTEEEEEETTTTEEEEEECCCTTCEEE----EEETTEEEE----ECSSCEEE
T ss_pred             EEEEEEEEeecC--CcceEEEEEEc--CCeeEEEeCCCcccccceEEeccccccc----cccCceEEE----ecCceEEE
Confidence            478999999986  46999999999  899999999 889999999999874432    234566665    35679999


Q ss_pred             EEeCChHHHHHHHHHHHhhhhh
Q psy9639         136 VYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       136 l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      |.|++ .++.+|+.+|+.+...
T Consensus       116 l~a~~-~d~~~Wv~aI~~v~~~  136 (147)
T d1w1ha_         116 LMDPS-GNAHKWCRKIQEVWRQ  136 (147)
T ss_dssp             EECTT-SCHHHHHHHHHHHHHH
T ss_pred             EEcCh-HHHHHHHHHHHHHHHH
Confidence            98865 5899999999877543

>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.63  E-value=5.8e-16  Score=132.20  Aligned_cols=95  Identities=16%  Similarity=0.253  Sum_probs=78.2

Q ss_pred             ccceeeEEEeecCC----CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC---CCCCCceeEEEEee
Q psy9639          56 TGHMDGFLMKRGKE----SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS---KIEHPHSLQLTFMK  127 (321)
Q Consensus        56 ~~~~~G~L~K~g~~----~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~---~~~~~~~~~i~~~~  127 (321)
                      ...++|||.|+|+.    .+.|++|||||.  ++.|.||++ .+..|+|.|+|.++.++..+.   ...++++|.|.   
T Consensus       103 ~~~k~G~L~K~~~~~~~~~~~Wkkr~fvL~--~~~L~yy~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~~~F~i~---  177 (209)
T d1u5ea1         103 FVIKAGYLEKRRKDHSFLGFEWQKRWCALS--KTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEIC---  177 (209)
T ss_dssp             SEEEEEEEEEEEHHHHTTTCCCEEEEEEEE--TTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEE---
T ss_pred             CeeEEEEEEEecCCCCCccccceEEEEEEE--CCEEEEEecCCCCccceEEEecceeeeeccccccccCCCcEEEEE---
Confidence            34789999999864    468999999999  999999999 999999999999987665433   22456777764   


Q ss_pred             cCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         128 DGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       128 ~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      ....|+|+|+|+|.+++.+|+++|+.+.
T Consensus       178 ~~~~r~~~f~a~s~~e~~~Wi~al~~~i  205 (209)
T d1u5ea1         178 APDKRIYQFTAASPKDAEEWVQQLKFIL  205 (209)
T ss_dssp             CSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence            2345999999999999999999998653

>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.62  E-value=3.6e-16  Score=121.99  Aligned_cols=100  Identities=9%  Similarity=0.228  Sum_probs=63.6

Q ss_pred             CcceEEEEEEeCCC-------CCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEccccc----CceEEecCCCCCCCCCC
Q psy9639         178 DFGREGWLWKTGPK-------NADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCS----DGYTVRLGVPPGAKDQG  246 (321)
Q Consensus       178 ~~~k~G~L~K~g~~-------~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~----~~~~V~~~~~~~~~~~~  246 (321)
                      ...++|||+++...       ..+.|++|||||+++.|+||+++.+..+.+.+.+....    .++.+...  ......+
T Consensus         7 ~~~~eG~L~rk~~~~~~~kk~~~~~W~kr~~vL~~~~L~yy~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~   84 (122)
T d1droa_           7 GEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIA--SDYTKKK   84 (122)
T ss_dssp             SSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEEC--CSSSSST
T ss_pred             CcceEEEEEEeecccccCcccCCCCceEEEEEEeCCEEEEEcCcccccccCcccccccceEeccceEEEec--ccccccc
Confidence            45789999987532       12579999999999999999988665544444332210    11222222  1223467


Q ss_pred             ceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         247 FTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       247 ~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ++|.|.+++ ++|+|+|+|++|+++||.||+.++
T Consensus        85 ~~~~l~~~~~~~~~f~a~s~~d~~~Wv~al~~~~  118 (122)
T d1droa_          85 HVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQS  118 (122)
T ss_dssp             TEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHH
T ss_pred             ceEEEECCCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence            899999875 889955555555555555555543

>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Mouse (Mus musculus), brain [TaxId: 10090]

Probab=99.60  E-value=3.1e-15  Score=113.51  Aligned_cols=91  Identities=20%  Similarity=0.375  Sum_probs=72.8

Q ss_pred             eeeEEEeecC--------CCCCceeeEEEEeccCCeEEeecC-C------CCCceeEEeccceEEEeccCCCCCCceeEE
Q psy9639          59 MDGFLMKRGK--------ESGKYHPRRFVLNEINDTIKYYVK-E------KKEPKATLRISELNVVIAPSKIEHPHSLQL  123 (321)
Q Consensus        59 ~~G~L~K~g~--------~~~~wk~R~fvL~~~~~~L~Yy~~-~------~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i  123 (321)
                      +||||+|++.        ..++|++|||||.  ++.|.||++ .      ...+.+.|+|.++.+...+....+++.|.|
T Consensus         1 ~eG~L~rk~~~~~~~kk~~~~~Wk~r~~vL~--~~~L~~yk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~f~i   78 (106)
T d1btna_           1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVIN--NQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKL   78 (106)
T ss_dssp             CEEEEEEEEEECSTTCBCSCCCCEEEEEEEE--TTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEECSSCCSSSSEEEE
T ss_pred             CeeeEEEeeEccCCCcccCCCCCcEEEEEEE--CCEEEEEeChhhcccccccCcceeEEeccceeeeccccccCcceEee
Confidence            5899999742        2356999999999  999999998 3      356778999998876666655667788876


Q ss_pred             EEeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639         124 TFMKDGSTRHIYVYHEESQSIMNWYHAIRNA  154 (321)
Q Consensus       124 ~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a  154 (321)
                      .   ....++++|+|+|.+++.+|+.+|++|
T Consensus        79 ~---~~~~~~~~~~a~s~~e~~~W~~ai~~A  106 (106)
T d1btna_          79 R---LSDGNEYLFQAKDDEEMNTWIQAISSA  106 (106)
T ss_dssp             E---CTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred             c---ccCCCEEEEECCCHHHHHHHHHHHHhC
Confidence            4   223478999999999999999999864

>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SH2 and PH domain-containing adapter protein APS
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.51  E-value=1.2e-14  Score=115.82  Aligned_cols=101  Identities=14%  Similarity=0.202  Sum_probs=73.8

Q ss_pred             cccccceeeEEEee--------cCCCCCceeeEEEEeccC----CeEEeecC-CCCCceeEEeccceEEEec---cCCCC
Q psy9639          53 TYITGHMDGFLMKR--------GKESGKYHPRRFVLNEIN----DTIKYYVK-EKKEPKATLRISELNVVIA---PSKIE  116 (321)
Q Consensus        53 ~~~~~~~~G~L~K~--------g~~~~~wk~R~fvL~~~~----~~L~Yy~~-~~~~pkg~I~l~~~~~~~~---~~~~~  116 (321)
                      ......|+|||.++        +...+.|++|||||....    ..|.||++ .+..|+|.|.|..+..+..   .+...
T Consensus        14 ~~~~v~keG~L~~~~~~~~~~~~~~~~~WkkrwfvL~~~~~~~~~~L~yy~~~~~~k~~g~i~l~~~~~~~~~~~~~~~~   93 (136)
T d1v5ma_          14 ELVDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAIIEVRTTMPLEMPE   93 (136)
T ss_dssp             CSCSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTTSSSCSSCEETTTCCBCCCCCCSSSCC
T ss_pred             ccceeeEEEEEEeeccccccCCCCCCCCceEEEEEEeCCcccchhhhhhhCcccccCcCcceecccceeeeeeccccCCC
Confidence            34467899999753        223467999999998311    14889999 9999999999998754322   22345


Q ss_pred             CCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         117 HPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       117 ~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      ++|.|+|. .  ...+.|+|+|+|++|+.+|+++|+.+..
T Consensus        94 ~~~~F~l~-t--~~~~~y~f~A~s~~e~~~Wv~ai~~ai~  130 (136)
T d1v5ma_          94 KDNTFVLK-V--ENGAEYILETIDSLQKHSWVADIQGCVD  130 (136)
T ss_dssp             CTTEECCB-C--TTSCBEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEE-c--CCCcEEEEECCCHHHHHHHHHHHHHHHh
Confidence            67777763 1  2235689999999999999999997743

>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Human (Homo sapiens), brain 2 isoform [TaxId: 9606]

Probab=99.51  E-value=7.9e-14  Score=108.40  Aligned_cols=96  Identities=11%  Similarity=0.263  Sum_probs=72.1

Q ss_pred             cceeeEEEeecC--------CCCCceeeEEEEeccCCeEEeecC-CCCC------ceeEEeccceEEEeccCCCCCCcee
Q psy9639          57 GHMDGFLMKRGK--------ESGKYHPRRFVLNEINDTIKYYVK-EKKE------PKATLRISELNVVIAPSKIEHPHSL  121 (321)
Q Consensus        57 ~~~~G~L~K~g~--------~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~------pkg~I~l~~~~~~~~~~~~~~~~~~  121 (321)
                      ..+||||.++..        ..+.|++|||||.  ++.|.||++ .+..      +.+.+.+..+.....+....+++.|
T Consensus         8 ~~~eG~L~rk~~~~~~~kr~~~k~Wkkrw~vL~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f   85 (123)
T d1wjma_           8 EQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLR--RGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVF   85 (123)
T ss_dssp             CCEEEEEEEEEEEEETTEECSCCCCEEEEEEEE--TTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECTTCSSCSSEE
T ss_pred             CeeEEEEEEEeeccccCcccCCCCCcEEEEEEE--CCEEEEEecchhccccccccccccccccceeEEecccccccCcEE
Confidence            478999998753        3567999999999  999999987 4333      3445556666555555566677877


Q ss_pred             EEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         122 QLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       122 ~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      .+.   ..+.+.|+|+|+|.+++.+|+++|+.+...
T Consensus        86 ~i~---~~~~~~~~l~a~s~~e~~~Wi~aI~~a~~~  118 (123)
T d1wjma_          86 KLG---LQDGKEYLFQAKDEAEMSSWLRVVNAAIAS  118 (123)
T ss_dssp             EEE---CSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             EEE---cCCCcEEEEECCCHHHHHHHHHHHHHHHhc
Confidence            653   334588999999999999999999877543

>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.46  E-value=7e-14  Score=108.68  Aligned_cols=94  Identities=9%  Similarity=0.258  Sum_probs=68.2

Q ss_pred             cceeeEEEeecCC--------CCCceeeEEEEeccCCeEEeecC-CCCCce--------eEEeccceEEEeccCCCCCCc
Q psy9639          57 GHMDGFLMKRGKE--------SGKYHPRRFVLNEINDTIKYYVK-EKKEPK--------ATLRISELNVVIAPSKIEHPH  119 (321)
Q Consensus        57 ~~~~G~L~K~g~~--------~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pk--------g~I~l~~~~~~~~~~~~~~~~  119 (321)
                      ..+||||+|++..        .++|++|||||.  ++.|.||++ .+..+.        +.|.+.++.....+.....++
T Consensus         8 ~~~eG~L~rk~~~~~~~kk~~~~~W~kr~~vL~--~~~L~yy~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~   85 (122)
T d1droa_           8 EGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAK--AGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKKH   85 (122)
T ss_dssp             SSEEEEEEEECSCCCCCCTTCCCCCEEEEEEES--SSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSSSSSTT
T ss_pred             cceEEEEEEeecccccCcccCCCCceEEEEEEe--CCEEEEEcCcccccccCcccccccceEeccceEEEeccccccccc
Confidence            4679999988632        346999999998  999999998 554444        344444444444444445667


Q ss_pred             eeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       120 ~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      .|.+.   ....++|+|.|+|++++.+|+.+|+.+.
T Consensus        86 ~~~l~---~~~~~~~~f~a~s~~d~~~Wv~al~~~~  118 (122)
T d1droa_          86 VLRVK---LANGALFLLQAHDDTEMSQWVTSLKAQS  118 (122)
T ss_dssp             EEEEE---CSSSCEEEEECSSSHHHHHHHHHHHHHH
T ss_pred             eEEEE---CCCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence            77664   2334789999999999999999998764

>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac/CDC42 GEF 6, alpha-pix
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=6.3e-11  Score=93.32  Aligned_cols=96  Identities=10%  Similarity=0.061  Sum_probs=68.8

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC---CcceeEEcccccCceEEecCCCCCCCCCCceEEEEe
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA---YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT  253 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~---~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t  253 (321)
                      ..++++|++.+++... +.|+.|||+|.++.|.|++.....   ..++.|+|..    +.|....  .....+|+|.|..
T Consensus        26 G~li~~g~~~~~~~~~-~~~k~R~~fLF~~~Ll~~k~~~~~~~~~~k~~i~l~~----~~v~~~~--~~~~~~~~f~i~~   98 (132)
T d1v61a_          26 GNVIFMSQVVMQHGAC-EEKEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAG----MVVNRLD--EIEGSDCMFEITG   98 (132)
T ss_dssp             CCCSCEEEEEBCCSSS-SCCCEEEEEECSSCEEEEECSSSSSCCEEEEEECTTT----CBCSTTC--SSSSSCCCEEEEC
T ss_pred             cCEEEEEEEEEEEecC-CCcceEEEEEeCCEEEEEEEcCCCceeEEeeecchhh----ccccccc--cccCccceEEEeC
Confidence            4678999999998877 799999999999999999864332   2478888854    4444322  2234678999997


Q ss_pred             C-CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         254 P-QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       254 ~-~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      + .++|+|.|.|++|+++||++|+++|
T Consensus        99 ~~~~~~~l~a~s~eek~~Wv~~L~~~i  125 (132)
T d1v61a_          99 STVERIVVHCNNNQDFQEWMEQLNRLT  125 (132)
T ss_dssp             SSSCEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence            6 5889965555555555555555544

>d1dcqa2 g.45.1.1 (A:247-368) Pyk2-associated protein beta ARF-GAP domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: ArfGap/RecO-like zinc finger
superfamily: ArfGap/RecO-like zinc finger
family: Pyk2-associated protein beta ARF-GAP domain
domain: Pyk2-associated protein beta ARF-GAP domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.12  E-value=1.6e-11  Score=95.31  Aligned_cols=49  Identities=22%  Similarity=0.331  Sum_probs=44.8

Q ss_pred             CccccchHHHHhhhccCCC-CCCCCCCCCChHHHHHHHHHhhhhcccccC
Q psy9639           1 MKQIGNNVSKLKYEMRVPA-SYKVPTSSCPQVLLKEWIRSKYEREEFRHP   49 (321)
Q Consensus         1 m~~~gn~~~~~~~e~~~p~-~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~   49 (321)
                      |...||..+|++||+++|. .+.+|.++++...||+|||+||++++|+..
T Consensus        71 ~~~~GN~~~n~~~ea~~~~~~~~kp~~~~~~~~r~~fI~~KY~~k~f~~k  120 (122)
T d1dcqa2          71 AKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARK  120 (122)
T ss_dssp             HHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCC
T ss_pred             HHHHhHHHHHHHHHhhCCcccCcCCCCCccHHHHHHHHHHHHHhCccccc
Confidence            4578999999999999997 577999999999999999999999999864

>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 9, Collybistin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.02  E-value=1.1e-09  Score=88.90  Aligned_cols=99  Identities=17%  Similarity=0.143  Sum_probs=74.3

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC----CCcceeEEcccccCceEEecCCCCCC----CCCCc
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS----AYPKGEIFLGHCSDGYTVRLGVPPGA----KDQGF  247 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~----~~~~g~i~L~~~~~~~~V~~~~~~~~----~~~~~  247 (321)
                      .+.++++|+|.+.+... +.|+.|||+|-++.|.|++....    ...++.|+|..    +.|........    ....+
T Consensus        24 ~r~Li~eG~L~~~~~~~-~k~~~r~~fLF~d~Ll~~k~~~~~~~~y~~k~~i~L~~----~~v~~~~~~~~~~~~~~~~~   98 (162)
T d2dfka2          24 SSELIYTGEMAWIYQPY-GRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDK----YEVIDIEDGRDDDFNVSMKN   98 (162)
T ss_dssp             CCCEEEEEEEEEESSTT-CCCEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGG----EEEEECCSEECSSSCCEESS
T ss_pred             CceEEEEEEEEEEEcCC-CCceeEEEEEeCCeEEEEEecCCCCCceEEccccchhh----ceeeecccccccccCccccc
Confidence            56889999999998766 68999999999999999875432    23578888854    44543221110    11257


Q ss_pred             eEEEEeC--CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         248 TFTLKTP--QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       248 ~F~i~t~--~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      +|.|..+  +++|.|+|+|++|+.+||++|+.++
T Consensus        99 ~f~i~~~~~~~~~~~~A~s~~eK~~W~~~l~~~~  132 (162)
T d2dfka2          99 AFKLHNKETEEVHLFFAKKLEEKIRWLRAFREER  132 (162)
T ss_dssp             EEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             eEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence            8999854  5799999999999999999999876

>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac/CDC42 GEF 6, alpha-pix
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=3.2e-09  Score=83.27  Aligned_cols=95  Identities=11%  Similarity=0.116  Sum_probs=75.0

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC---CCceeEEeccceEEEeccCCCCCCceeEEEEeecCce
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK---KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGST  131 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~---~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~  131 (321)
                      .-.++|++.+++...+.|+.|||+|.  ++.|.|++. ..   -..++.|+|.++.++..+...+.+++|.|.   ....
T Consensus        27 ~li~~g~~~~~~~~~~~~k~R~~fLF--~~~Ll~~k~~~~~~~~~~k~~i~l~~~~v~~~~~~~~~~~~f~i~---~~~~  101 (132)
T d1v61a_          27 NVIFMSQVVMQHGACEEKEERYFLLF--SSVLIMLSASPRMSGFMYQGKIPIAGMVVNRLDEIEGSDCMFEIT---GSTV  101 (132)
T ss_dssp             CCSCEEEEEBCCSSSSCCCEEEEEEC--SSCEEEEECSSSSSCCEEEEEECTTTCBCSTTCSSSSSCCCEEEE---CSSS
T ss_pred             CEEEEEEEEEEEecCCCcceEEEEEe--CCEEEEEEEcCCCceeEEeeecchhhccccccccccCccceEEEe---CCCC
Confidence            45789999999988899999999999  899999986 32   234799999999654444445566777653   2335


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      +.|.|+|.|+++..+|+++|+.+.
T Consensus       102 ~~~~l~a~s~eek~~Wv~~L~~~i  125 (132)
T d1v61a_         102 ERIVVHCNNNQDFQEWMEQLNRLT  125 (132)
T ss_dssp             CEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CEEEEEcCCHHHHHHHHHHHHHHH
Confidence            789999999999999999998653

>d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Exocyst complex protein EXO84
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.91  E-value=6.7e-09  Score=78.44  Aligned_cols=97  Identities=12%  Similarity=-0.040  Sum_probs=70.9

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC----CCcceeEEcccccCceEEecCCCCCCCCCCceEEEE
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS----AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLK  252 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~----~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~  252 (321)
                      +.++++|.|.+......+.-++|++.|-++.|.+.+...+    ...++.|+|..    +.|.+..  +.....++|.|.
T Consensus         2 R~li~eG~l~~~~~~~~k~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~l~~----~~v~~~~--d~~~~~n~f~i~   75 (109)
T d1zc3b1           2 QYLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDR----LAVVNVK--DNPPMKDMFKLL   75 (109)
T ss_dssp             CCEEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTT----CEEEEEC--CBTTBSSEEEEE
T ss_pred             CEEEEeeeEEEEccCCCCcceeEEEEEecCEEEEEEEcCCcceEEEeeeEEeccc----eEEEEee--cccccceEEEEc
Confidence            3568999999886665455678999999999988764322    23467788854    4454432  222456899999


Q ss_pred             eCCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         253 TPQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       253 t~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ++.++|.|+|+|++|+.+|+++|++|+
T Consensus        76 ~~~~~~~~~a~s~~eK~~W~~~l~~a~  102 (109)
T d1zc3b1          76 MFPESRIFQAENAKIKREWLEVLEETK  102 (109)
T ss_dssp             ETTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEECCHHHHHHHHHHHHHHH
Confidence            999999988888888888888888776

>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C delta-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.80  E-value=1.4e-08  Score=77.97  Aligned_cols=92  Identities=16%  Similarity=0.271  Sum_probs=62.3

Q ss_pred             ceee-EEEeecCCCCCceeeEEEEeccCCeEEeecC---CCCCceeEEeccceEEEec----------cCCCCCCceeEE
Q psy9639          58 HMDG-FLMKRGKESGKYHPRRFVLNEINDTIKYYVK---EKKEPKATLRISELNVVIA----------PSKIEHPHSLQL  123 (321)
Q Consensus        58 ~~~G-~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~---~~~~pkg~I~l~~~~~~~~----------~~~~~~~~~~~i  123 (321)
                      .++| .|.|-++ .+..++|||+|.++...| ||.+   ....+++.|+|.++..+..          +.......+|.|
T Consensus        11 l~~G~~l~K~~~-~~~~k~R~f~L~~d~~~i-~~~~~~~~~~~~~~~i~i~~I~~V~~G~~s~~~~~~~~~~~~~~~FsI   88 (119)
T d1maia_          11 LLKGSQLLKVKS-SSWRRERFYKLQEDCKTI-WQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSI   88 (119)
T ss_dssp             HHHCEEEEEESS-SSCEEEEEEEECTTSSEE-EECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEE
T ss_pred             HHcCCeEEEeCC-CCCCEEEEEEEcCCCCEE-EEeCCCCCCCccceEEEHHHceEEEcCCCCchhhhcccCCCcCceEEE
Confidence            3466 4556543 334477999998533445 5554   3455689999999876532          112223457777


Q ss_pred             EEeecCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639         124 TFMKDGSTRHIYVYHEESQSIMNWYHAIRN  153 (321)
Q Consensus       124 ~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~  153 (321)
                      .|  .+..|+++|.|+|.++...|+.+|+.
T Consensus        89 v~--~~~~r~l~l~a~s~~~~~~Wv~~L~~  116 (119)
T d1maia_          89 VF--KDQRNTLDLIAPSPADAQHWVQGLRK  116 (119)
T ss_dssp             EE--SSSCCCEEEECSSHHHHHHHHHHHHH
T ss_pred             EE--cCCCcEEEEEECCHHHHHHHHHHHHH
Confidence            65  34458999999999999999999974

>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C delta-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.78  E-value=3.4e-08  Score=75.62  Aligned_cols=91  Identities=19%  Similarity=0.304  Sum_probs=54.1

Q ss_pred             ceEE-EEEEeCCCCCCCc-ceEEEEEeC-CeeEeeeCCCC--CCcceeEEcccccCceEEecCCC-------CCCCCCCc
Q psy9639         180 GREG-WLWKTGPKNADAY-RKRWFTLDY-RKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVP-------PGAKDQGF  247 (321)
Q Consensus       180 ~k~G-~L~K~g~~~~~~W-kkRwfvL~~-~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~-------~~~~~~~~  247 (321)
                      +++| +|.|-+..   +| ++|||.|+. ..+.||.++.+  ..+.|.|+|.++.   .|..+..       ........
T Consensus        11 l~~G~~l~K~~~~---~~~k~R~f~L~~d~~~i~~~~~~~~~~~~~~~i~i~~I~---~V~~G~~s~~~~~~~~~~~~~~   84 (119)
T d1maia_          11 LLKGSQLLKVKSS---SWRRERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQ---EVRMGHRTEGLEKFARDIPEDR   84 (119)
T ss_dssp             HHHCEEEEEESSS---SCEEEEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEE---EEEESSCSHHHHHHCTTSCGGG
T ss_pred             HHcCCeEEEeCCC---CCCEEEEEEEcCCCCEEEEeCCCCCCCccceEEEHHHce---EEEcCCCCchhhhcccCCCcCc
Confidence            4566 56666533   45 669999974 44556655432  3457899998763   3444321       01112347


Q ss_pred             eEEEE--eCCeEEEEEcCCHHHHHHHHHHHh
Q psy9639         248 TFTLK--TPQRWYQFSALSAPDRDQWIQAVQ  276 (321)
Q Consensus       248 ~F~i~--t~~r~~~f~A~s~~e~~~Wv~aL~  276 (321)
                      ||.|+  +..|++.|.|+|+++++.||.+|+
T Consensus        85 ~FsIv~~~~~r~l~l~a~s~~~~~~Wv~~L~  115 (119)
T d1maia_          85 CFSIVFKDQRNTLDLIAPSPADAQHWVQGLR  115 (119)
T ss_dssp             EEEEEESSSCCCEEEECSSHHHHHHHHHHHH
T ss_pred             eEEEEEcCCCcEEEEEECCHHHHHHHHHHHH
Confidence            89998  456899955555555555555554

>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 9, Collybistin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.70  E-value=8.9e-08  Score=77.34  Aligned_cols=97  Identities=12%  Similarity=0.149  Sum_probs=72.8

Q ss_pred             ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC----CCceeEEeccceEEEeccCCCC------CCceeEEE
Q psy9639          56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK----KEPKATLRISELNVVIAPSKIE------HPHSLQLT  124 (321)
Q Consensus        56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~----~~pkg~I~l~~~~~~~~~~~~~------~~~~~~i~  124 (321)
                      .-.++|.|.+.+...+.|+.|||+|.  ++.|.|++. ..    -.+++.|+|..+...-.+...+      -+|+|.|.
T Consensus        26 ~Li~eG~L~~~~~~~~k~~~r~~fLF--~d~Ll~~k~~~~~~~~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~~~f~i~  103 (162)
T d2dfka2          26 ELIYTGEMAWIYQPYGRNQQRVFFLF--DHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLH  103 (162)
T ss_dssp             CEEEEEEEEEESSTTCCCEEEEEEEE--TTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEEE
T ss_pred             eEEEEEEEEEEEcCCCCceeEEEEEe--CCeEEEEEecCCCCCceEEccccchhhceeeecccccccccCccccceEEEE
Confidence            34789999999988889999999999  899998875 32    3567899999886543322111      23566653


Q ss_pred             EeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         125 FMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       125 ~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      .  .+..+.|.|+|.|+++...|+++|+.++-
T Consensus       104 ~--~~~~~~~~~~A~s~~eK~~W~~~l~~~~~  133 (162)
T d2dfka2         104 N--KETEEVHLFFAKKLEEKIRWLRAFREERK  133 (162)
T ss_dssp             E--SSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             E--CCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence            2  33346799999999999999999998753

>d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Son of sevenless-1 (sos-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=4.2e-07  Score=70.67  Aligned_cols=92  Identities=20%  Similarity=0.257  Sum_probs=62.5

Q ss_pred             hCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCC-----------cceeEEcccccCceEEecCCCCCCC
Q psy9639         175 LTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAY-----------PKGEIFLGHCSDGYTVRLGVPPGAK  243 (321)
Q Consensus       175 ~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~-----------~~g~i~L~~~~~~~~V~~~~~~~~~  243 (321)
                      ..+.++++|.|.+.+..     +.|||.|-++.|.|.+...+..           .++.|+|..    +.|....  +..
T Consensus        23 ~gr~li~eG~l~~~~~~-----k~r~~fLF~d~Li~~k~~~~~~~~~~~~~~~y~~k~~i~l~~----~~v~~~~--~~~   91 (133)
T d1dbha2          23 CCNEFIMEGTLTRVGAK-----HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRK----VQINDKD--DTN   91 (133)
T ss_dssp             TCCCEEEEEEEEETTCS-----SCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCS----CEEEECC--CSS
T ss_pred             cCcEEEEEeEEEEecCC-----CeEEEEEecCeEEEEEecccccccccCCCccEEEEeeeeccc----ccccccC--CCc
Confidence            45678999999987643     5899999999999997543211           357788854    5565432  223


Q ss_pred             CCCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHhh
Q psy9639         244 DQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQT  277 (321)
Q Consensus       244 ~~~~~F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~  277 (321)
                      ..+++|.|.++ .+.|.|+|+|++|+.+||++|.+
T Consensus        92 ~~~~~f~i~~~~~~~~~l~a~s~~eK~~W~~~l~~  126 (133)
T d1dbha2          92 EYKHAFEIILKDENSVIFSAKSAEEKNNWMAALIS  126 (133)
T ss_dssp             SCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHH
T ss_pred             ccccceeEEcCCCcEEEEEECCHHHHHHHHHHHHH
Confidence            45789999875 56888666666666666555544

>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=3.9e-06  Score=65.59  Aligned_cols=94  Identities=18%  Similarity=0.161  Sum_probs=55.5

Q ss_pred             hCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC------------------CcceeEEcccccCceEEec
Q psy9639         175 LTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA------------------YPKGEIFLGHCSDGYTVRL  236 (321)
Q Consensus       175 ~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~------------------~~~g~i~L~~~~~~~~V~~  236 (321)
                      ..+..+++|.|..+...  +..+.|+|.|-++.|.|-+.....                  ...+.+.+..    ..+..
T Consensus        21 ~~R~Li~eG~L~~k~~~--~k~k~r~~FLF~D~Ll~tk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~   94 (140)
T d1xcga2          21 TTRKMIHEGPLTWRISK--DKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNA----VLIRS   94 (140)
T ss_dssp             GGSCEEEEEEEEECCSS--SCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGG----EEEEE
T ss_pred             ccceEEEEeeEEEEecC--CCceEEEEEEecCeEEEEEecccceeeccccccccccccceeeecceEecce----EEEec
Confidence            45788999999754332  467899999999999997754321                  0112233321    12222


Q ss_pred             CCCCCCCCCCceEEEEeC-----CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         237 GVPPGAKDQGFTFTLKTP-----QRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       237 ~~~~~~~~~~~~F~i~t~-----~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .     ...+++|.|+..     ..+|.|+|+|++|+++|+++|++||
T Consensus        95 ~-----~~~~~~f~li~~~~~~~~~~~~l~A~s~~eK~~Wi~~i~~aI  137 (140)
T d1xcga2          95 V-----ATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAV  137 (140)
T ss_dssp             C-----SSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             C-----CCCCCeEEEEEcCCCCCceEEEEEcCCHHHHHHHHHHHHHHH
Confidence            1     134567888642     3677755555555555555555554

>d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Son of sevenless-1 (sos-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=2e-06  Score=66.71  Aligned_cols=90  Identities=14%  Similarity=0.217  Sum_probs=67.3

Q ss_pred             cceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCC-----------CceeEEeccceEEEeccCCCCCCceeEEE
Q psy9639          57 GHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKK-----------EPKATLRISELNVVIAPSKIEHPHSLQLT  124 (321)
Q Consensus        57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~-----------~pkg~I~l~~~~~~~~~~~~~~~~~~~i~  124 (321)
                      -.++|.|.|.++.    +.|+|.|.  ++.|.|.+. ...           ..++.|+|+++.+.-.+...+.+|+|.+.
T Consensus        27 li~eG~l~~~~~~----k~r~~fLF--~d~Li~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~~~~~~~~~f~i~  100 (133)
T d1dbha2          27 FIMEGTLTRVGAK----HERHIFLF--DGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEII  100 (133)
T ss_dssp             EEEEEEEEETTCS----SCEEEEEE--SSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCSSSCCSEEEEC
T ss_pred             EEEEeEEEEecCC----CeEEEEEe--cCeEEEEEecccccccccCCCccEEEEeeeecccccccccCCCcccccceeEE
Confidence            4679999998764    68999999  899999875 321           13688999998654334444556777653


Q ss_pred             EeecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         125 FMKDGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       125 ~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                         ..+.+.+.|+|.|+++...|+++|+...
T Consensus       101 ---~~~~~~~~l~a~s~~eK~~W~~~l~~~~  128 (133)
T d1dbha2         101 ---LKDENSVIFSAKSAEEKNNWMAALISLQ  128 (133)
T ss_dssp             ---CTTSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             ---cCCCcEEEEEECCHHHHHHHHHHHHHHH
Confidence               3334678899999999999999998653

>d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Exocyst complex protein EXO84
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.30  E-value=5e-06  Score=61.99  Aligned_cols=94  Identities=14%  Similarity=0.098  Sum_probs=69.7

Q ss_pred             ceeeEEEeecCCC-CCceeeEEEEeccCCeEEeecC-CC----CCceeEEeccceEEEeccCCCCCCceeEEEEeecCce
Q psy9639          58 HMDGFLMKRGKES-GKYHPRRFVLNEINDTIKYYVK-EK----KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGST  131 (321)
Q Consensus        58 ~~~G~L~K~g~~~-~~wk~R~fvL~~~~~~L~Yy~~-~~----~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~  131 (321)
                      .++|-|.+..... +.-++|++.|.  ++.|.+-+. .+    -..+..|+|.++.++-.++.....|+|.|.    ++.
T Consensus         5 i~eG~l~~~~~~~~k~~~~~~~fLF--~d~Ll~~k~~~~~~~~~~~~~~~~l~~~~v~~~~d~~~~~n~f~i~----~~~   78 (109)
T d1zc3b1           5 VYNGDLVEYEADHMAQLQRVHGFLM--NDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDNPPMKDMFKLL----MFP   78 (109)
T ss_dssp             EEEEEEEEEETTTCCEEEEEEEEEE--SSEEEEEEEECCTTSCEEEEEEEETTTCEEEEECCBTTBSSEEEEE----ETT
T ss_pred             EEeeeEEEEccCCCCcceeEEEEEe--cCEEEEEEEcCCcceEEEeeeEEeccceEEEEeecccccceEEEEc----cCC
Confidence            4689999876544 44678999999  889888765 33    245689999998664444444455777663    445


Q ss_pred             EEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639         132 RHIYVYHEESQSIMNWYHAIRNAKFH  157 (321)
Q Consensus       132 R~~~l~a~s~~e~~~W~~aLr~a~~~  157 (321)
                      +++.|+|+|.++...|+++|+.++..
T Consensus        79 ~~~~~~a~s~~eK~~W~~~l~~a~~~  104 (109)
T d1zc3b1          79 ESRIFQAENAKIKREWLEVLEETKRA  104 (109)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEECCHHHHHHHHHHHHHHHHH
Confidence            78999999999999999999988654

>d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: GEF of intersectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=4.5e-07  Score=71.36  Aligned_cols=94  Identities=22%  Similarity=0.293  Sum_probs=62.0

Q ss_pred             CCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC-----------------CcceeEEcccccCceEEecCC
Q psy9639         176 TRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA-----------------YPKGEIFLGHCSDGYTVRLGV  238 (321)
Q Consensus       176 ~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~-----------------~~~g~i~L~~~~~~~~V~~~~  238 (321)
                      .+.++++|.|.|..     .=+.|||.|-++.|.|-+...+.                 ..+..|+|..    +.|... 
T Consensus        22 ~R~li~eG~L~k~~-----~~k~r~~FLFnD~Ll~tK~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~----l~v~~~-   91 (142)
T d1ki1b2          22 PRKFLHSGKLYKAK-----NNKELYGFLFNDFLLLTQITKPLGSSGTDKVFSPKSNLQYMYKTPIFLNE----VLVKLP-   91 (142)
T ss_dssp             BCCEEEECCCBCSS-----SCCCCEEEEESSEEEEEEEECC-------CCSCSSCCEEEECSSCEEGGG----EEEECC-
T ss_pred             CeEEEEeeEEEEec-----CCCEEEEEEecCEEEEEEeccccceeccccccccCCceeEEEEcccchhh----heeecc-
Confidence            36789999998752     22589999999999997543221                 1233466633    444432 


Q ss_pred             CCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639         239 PPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT  280 (321)
Q Consensus       239 ~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~  280 (321)
                       .+.....+.|.+..+++.|.|+|+|++|+..||++|+.||.
T Consensus        92 -~d~~~~~~~~~~~~~~~~~~l~a~s~~ek~~W~~~I~~Ai~  132 (142)
T d1ki1b2          92 -TDPSGDEPIFHISHIDRVYTLRAESINERTAWVQKIKAASE  132 (142)
T ss_dssp             -SSSCCC---CEEEETTEEEECBCSSHHHHHHHHHHHHHHHH
T ss_pred             -CCcccceeEEEecCCCEEEEEEeCCHHHHHHHHHHHHHHHH
Confidence             22223457788889999999888888888888888887774

>d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Triple functional domain protein TRIO
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=9.8e-06  Score=61.51  Aligned_cols=95  Identities=19%  Similarity=0.215  Sum_probs=59.2

Q ss_pred             CCcceEEEEEEeCCCC-CCCcceEEEEEeCCeeEeeeCC--CCC----CcceeEEcccccCceEEecCCCCCCCCCCceE
Q psy9639         177 RDFGREGWLWKTGPKN-ADAYRKRWFTLDYRKLMYHEEP--LSA----YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTF  249 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~-~~~WkkRwfvL~~~~L~Yyk~~--~~~----~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F  249 (321)
                      ...+++|.|.-..+.. .+..+.|++.|-++.|.|-+..  ...    ..+..|++..    +.+.+..    .+.++.|
T Consensus        11 G~Ll~~g~l~v~~~~~~~~k~~~R~~FLF~d~Ll~~K~k~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~f   82 (121)
T d1ntya2          11 GELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSE----LGVTEHV----EGDPCKF   82 (121)
T ss_dssp             CCEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGG----EEEECCC----TTCTTEE
T ss_pred             CcEEEEeEEEEEcccccCCCCcEEEEEeeCCeEEEEEEecCCCCCceeEEEeeEEecc----eEEEEcC----CCCCceE
Confidence            3579999998544332 2467899999999999997632  211    1244555533    3343321    2356789


Q ss_pred             EEEe-----CCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         250 TLKT-----PQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       250 ~i~t-----~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      .|..     +...|.|+|.|++++++||++|+++|
T Consensus        83 ~i~~~~~~~~~~~~~l~a~s~~eK~~W~~~I~~~i  117 (121)
T d1ntya2          83 ALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVI  117 (121)
T ss_dssp             EEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHH
Confidence            9863     24678866666666666666666654

>d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 12
species: Human (Homo sapiens), gamma isoform [TaxId: 9606]

Probab=98.00  E-value=4.3e-05  Score=57.35  Aligned_cols=90  Identities=16%  Similarity=0.087  Sum_probs=56.3

Q ss_pred             ceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC------------------CcceeEEcccccCceEEecCCCCC
Q psy9639         180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA------------------YPKGEIFLGHCSDGYTVRLGVPPG  241 (321)
Q Consensus       180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~------------------~~~g~i~L~~~~~~~~V~~~~~~~  241 (321)
                      +++|-|..+...+  .-+.|++.|-+..|.+-+...+.                  ..+..|+|..    ..|++..   
T Consensus         2 i~eG~L~~~~~~~--k~~er~vFLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~----l~v~e~~---   72 (114)
T d1txda2           2 IHEGPLVWKVNRD--KTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLST----VLVRQVA---   72 (114)
T ss_dssp             EEEEEEEEESSSS--CBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGG----EEEEECC---
T ss_pred             ceeeeEEEEecCC--CceEEEEEEecCeEEEEEecccccccccccccccccccceeeecCcEEccc----EEEEEcC---
Confidence            6799998655443  34789999999988887643321                  1123566643    3454422   


Q ss_pred             CCCCCceEEEEeCC---eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         242 AKDQGFTFTLKTPQ---RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       242 ~~~~~~~F~i~t~~---r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                       .+.+..|.|.+.+   ..|.|+|.|+++++.||++|++++
T Consensus        73 -~d~~~~fli~~~~~~~~~y~l~A~s~~eK~~W~~~I~~~~  112 (114)
T d1txda2          73 -TDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMA  112 (114)
T ss_dssp             -C-CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             -CCCCCEEEEEecCCCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence             2345678888653   578877777776666666666643

>d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: GEF of intersectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=2.4e-05  Score=61.06  Aligned_cols=91  Identities=18%  Similarity=0.101  Sum_probs=60.9

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC-----------------CCceeEEeccceEEEeccCCCCCCc
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK-----------------KEPKATLRISELNVVIAPSKIEHPH  119 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~-----------------~~pkg~I~l~~~~~~~~~~~~~~~~  119 (321)
                      .++|.|+|..+.    +.|+|.|.  ++.|.|=+. .+                 -..+..|+|..+.+.-..    ++.
T Consensus        26 i~eG~L~k~~~~----k~r~~FLF--nD~Ll~tK~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~l~v~~~~----d~~   95 (142)
T d1ki1b2          26 LHSGKLYKAKNN----KELYGFLF--NDFLLLTQITKPLGSSGTDKVFSPKSNLQYMYKTPIFLNEVLVKLPT----DPS   95 (142)
T ss_dssp             EEECCCBCSSSC----CCCEEEEE--SSEEEEEEEECC-------CCSCSSCCEEEECSSCEEGGGEEEECCS----SSC
T ss_pred             EEeeEEEEecCC----CEEEEEEe--cCEEEEEEeccccceeccccccccCCceeEEEEcccchhhheeeccC----Ccc
Confidence            679999875322    58999999  899988654 21                 122445778777443221    223


Q ss_pred             eeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhhhh
Q psy9639         120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFHR  158 (321)
Q Consensus       120 ~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~~  158 (321)
                      ++.+.+...+..+.|.|+|+|++|...|+.+|+.|...+
T Consensus        96 ~~~~~~~~~~~~~~~~l~a~s~~ek~~W~~~I~~Ai~~~  134 (142)
T d1ki1b2          96 GDEPIFHISHIDRVYTLRAESINERTAWVQKIKAASELY  134 (142)
T ss_dssp             CC---CEEEETTEEEECBCSSHHHHHHHHHHHHHHHHHH
T ss_pred             cceeEEEecCCCEEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence            333334444566899999999999999999999887654

>d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: UNC-89
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.69  E-value=0.00011  Score=55.43  Aligned_cols=92  Identities=17%  Similarity=0.125  Sum_probs=58.7

Q ss_pred             CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC-----CCcceeEEcccccCceEEecCCCCCCCCCCceEEE
Q psy9639         177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS-----AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTL  251 (321)
Q Consensus       177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~-----~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i  251 (321)
                      ..++..|++....+..  .=+.|++.|-+..|.|.+....     ..-++.|+|..    +.|.+..     +....|.|
T Consensus         8 G~ll~~~~f~v~~~~~--k~k~R~vFLF~~~ll~~K~~~~~~~~~y~~K~~i~l~~----~~v~e~~-----gd~~~F~i   76 (119)
T d1fhoa_           8 GRIIRHDAFQVWEGDE--PPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDK----YNIRQHT-----TDEDTIVL   76 (119)
T ss_dssp             CCSSEEEEEEECSTTC--SCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSS----CEEEEEC-----TTCCEEEE
T ss_pred             CceEEEeEEEEEeCCC--CceEEEEEEEcCeEEEEEeccCCCCceEEEecEEECCc----eEEEEcC-----CCCcEEEE
Confidence            3567788888765543  3457888899999888875322     23488999954    4455432     23457988


Q ss_pred             EeCC-------eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         252 KTPQ-------RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       252 ~t~~-------r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      ...+       .++.++|.|+++++.|+++|.+++
T Consensus        77 ~~~~~~~~~~~~~~~~~a~s~~~K~~Wv~~I~e~~  111 (119)
T d1fhoa_          77 QPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQ  111 (119)
T ss_dssp             ECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCC
T ss_pred             EeCCCCCCcceEEEEEecCCHHHHHHHHHHHHHHH
Confidence            7542       245655666666666666666554

>d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dbl's big sister, Dbs
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.63  E-value=0.00025  Score=55.49  Aligned_cols=94  Identities=11%  Similarity=0.115  Sum_probs=61.7

Q ss_pred             CcceEEEEEEeCCC----------CCCCcceEEEEEeCCeeEeeeCCCCC----------CcceeEEcccccCceEEecC
Q psy9639         178 DFGREGWLWKTGPK----------NADAYRKRWFTLDYRKLMYHEEPLSA----------YPKGEIFLGHCSDGYTVRLG  237 (321)
Q Consensus       178 ~~~k~G~L~K~g~~----------~~~~WkkRwfvL~~~~L~Yyk~~~~~----------~~~g~i~L~~~~~~~~V~~~  237 (321)
                      .++++|.|.--.+.          ..+.=+.|+|.|-+..|.|-+.....          ..++.|++..    +.|.+.
T Consensus        12 ~Ll~qg~~~v~~~~~~~~~~~~~~~~~K~~~R~~FLF~~~Li~cK~~~~~~~~~~~~~~y~~k~~~~~~~----~~v~~~   87 (147)
T d1kz7a2          12 KLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTA----VGITEN   87 (147)
T ss_dssp             CEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGG----EEEECC
T ss_pred             CEEEeeeEEEEecCccchhhhhhhhccCCceEEEEEecCcEEEEEecccCCcccccCceEEEeeEEecCC----ceeEec
Confidence            46788988632111          11234789999999999998743221          1256666643    334332


Q ss_pred             CCCCCCCCCceEEEE--eCCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         238 VPPGAKDQGFTFTLK--TPQRWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       238 ~~~~~~~~~~~F~i~--t~~r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                          ..+..+.|.|.  .+...|.|.|.|+++++.||++|+.++
T Consensus        88 ----~~~~~~~f~~~~~~~~~~~~l~a~s~eeK~~W~~~I~~~l  127 (147)
T d1kz7a2          88 ----VKGDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVL  127 (147)
T ss_dssp             ----BTTBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             ----CCCCcceEEEEeCCCCcEEEEEeCCHHHHHHHHHHHHHHH
Confidence                12345667666  467899999999999999999998876

>d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 12
species: Human (Homo sapiens), gamma isoform [TaxId: 9606]

Probab=97.60  E-value=0.00058  Score=50.84  Aligned_cols=92  Identities=13%  Similarity=0.119  Sum_probs=60.7

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC------------------CCceeEEeccceEEEeccCCCCCC
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK------------------KEPKATLRISELNVVIAPSKIEHP  118 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~------------------~~pkg~I~l~~~~~~~~~~~~~~~  118 (321)
                      .++|-|..+++. +.-+.|++.|.  ++.|.+-+. .+                  ...+..|+|..+.+.  ....+.+
T Consensus         2 i~eG~L~~~~~~-~k~~er~vFLF--~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~l~v~--e~~~d~~   76 (114)
T d1txda2           2 IHEGPLVWKVNR-DKTIDLYTLLL--EDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVR--QVATDNK   76 (114)
T ss_dssp             EEEEEEEEESSS-SCBCCEEEEEE--SSEEEEEEEETTEEECCC-------------CCCSEEEGGGEEEE--ECCC-CC
T ss_pred             ceeeeEEEEecC-CCceEEEEEEe--cCeEEEEEecccccccccccccccccccceeeecCcEEcccEEEE--EcCCCCC
Confidence            368999654433 33478999998  788877665 32                  122446778877432  1122444


Q ss_pred             ceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639         119 HSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAK  155 (321)
Q Consensus       119 ~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~  155 (321)
                      ..|.| +..+.+...|-|+|.|+++...|++.|+.+.
T Consensus        77 ~~fli-~~~~~~~~~y~l~A~s~~eK~~W~~~I~~~~  112 (114)
T d1txda2          77 ALFVI-SMSDNGAQIYELVAQTVSEKTVWQDLICRMA  112 (114)
T ss_dssp             EEEEE-EECSSCEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CEEEE-EecCCCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence            45554 4445556789999999999999999998763

>d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Triple functional domain protein TRIO
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=0.00054  Score=51.38  Aligned_cols=95  Identities=17%  Similarity=0.139  Sum_probs=65.2

Q ss_pred             ceeeEEEeecCC--CCCceeeEEEEeccCCeEEeecC---CC----CCceeEEeccceEEEeccCCCCCCceeEEEEee-
Q psy9639          58 HMDGFLMKRGKE--SGKYHPRRFVLNEINDTIKYYVK---EK----KEPKATLRISELNVVIAPSKIEHPHSLQLTFMK-  127 (321)
Q Consensus        58 ~~~G~L~K~g~~--~~~wk~R~fvL~~~~~~L~Yy~~---~~----~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~-  127 (321)
                      .++|.|.-..+.  .+..+.|++.|.  ++.|.|=+.   ..    ...+..|++.++...  +...+.++.|.|.... 
T Consensus        14 l~~g~l~v~~~~~~~~k~~~R~~FLF--~d~Ll~~K~k~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~f~i~~~~~   89 (121)
T d1ntya2          14 ILQESFQVWDPKTLIRKGRERHLFLF--EMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVT--EHVEGDPCKFALWVGRT   89 (121)
T ss_dssp             EEEEEEEEECSSSSSCCEEEEEEEEE--SSEEEEEEEEECTTCCEEEEEEEEEEGGGEEEE--CCCTTCTTEEEEEESSS
T ss_pred             EEEeEEEEEcccccCCCCcEEEEEee--CCeEEEEEEecCCCCCceeEEEeeEEecceEEE--EcCCCCCceEEEEEecC
Confidence            567777632222  345789999999  889888653   11    235667888887432  2233567888875433 


Q ss_pred             cCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         128 DGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       128 ~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      .++...|.|+|.|+++...|+++|+.+..
T Consensus        90 ~~~~~~~~l~a~s~~eK~~W~~~I~~~i~  118 (121)
T d1ntya2          90 PTSDNKIVLKASSIENKQDWIKHIREVIQ  118 (121)
T ss_dssp             CCTTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEECCCHHHHHHHHHHHHHHHH
Confidence            24456788999999999999999987643

>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=0.00099  Score=51.20  Aligned_cols=92  Identities=15%  Similarity=0.157  Sum_probs=60.8

Q ss_pred             ceeeEEE-eecCCCCCceeeEEEEeccCCeEEeecC-CCC------------------CceeEEeccceEEEeccCCCCC
Q psy9639          58 HMDGFLM-KRGKESGKYHPRRFVLNEINDTIKYYVK-EKK------------------EPKATLRISELNVVIAPSKIEH  117 (321)
Q Consensus        58 ~~~G~L~-K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~------------------~pkg~I~l~~~~~~~~~~~~~~  117 (321)
                      .++|-|. |.++  +..+.|+|.|.  ++.|.|-+. ...                  ...+.+.+..+.+   .+..+.
T Consensus        26 i~eG~L~~k~~~--~k~k~r~~FLF--~D~Ll~tk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~   98 (140)
T d1xcga2          26 IHEGPLTWRISK--DKTLDLHVLLL--EDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLI---RSVATD   98 (140)
T ss_dssp             EEEEEEEECCSS--SCCCEEEEEEE--SSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEE---EECSSC
T ss_pred             EEEeeEEEEecC--CCceEEEEEEe--cCeEEEEEecccceeeccccccccccccceeeecceEecceEEE---ecCCCC
Confidence            6799995 5443  56779999999  888888654 211                  1122344444322   122356


Q ss_pred             CceeEEEEee-cCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         118 PHSLQLTFMK-DGSTRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       118 ~~~~~i~~~~-~~~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      +++|.+.... .+....+.|+|.|+++...|+++|+.+..
T Consensus        99 ~~~f~li~~~~~~~~~~~~l~A~s~~eK~~Wi~~i~~aI~  138 (140)
T d1xcga2          99 KRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVR  138 (140)
T ss_dssp             SSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEcCCCCCceEEEEEcCCHHHHHHHHHHHHHHHH
Confidence            7888775332 23447789999999999999999987743

>d2adza1 b.55.1.1 (A:1-43,A:117-178) Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Alpha-1-syntrophin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.22  E-value=0.0058  Score=43.51  Aligned_cols=93  Identities=14%  Similarity=0.143  Sum_probs=63.0

Q ss_pred             CcceEEEEEEeCCCC----CCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe
Q psy9639         178 DFGREGWLWKTGPKN----ADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT  253 (321)
Q Consensus       178 ~~~k~G~L~K~g~~~----~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t  253 (321)
                      ..-+.|.|.-+.+..    ...|.|-...|.+..|..--.    .-...|+|.-+   |..+...+.+  ..+.+|+|.+
T Consensus         5 ra~rsGlLE~~~~~~~~~~~~rW~rVl~~L~ed~Lt~s~~----~d~k~IPLKmc---yvtR~~~~~D--~EnR~lElhS   75 (105)
T d2adza1           5 RAPRTGLLELRCGAGSGAGGERWQRVLLSLAEDALTVSPL----SEAKHVSLKMA---YVSRRCTPTD--PEPRYLEICA   75 (105)
T ss_dssp             CCCEEEEEEECCCCSSSSSCCCCEEEEEEEETTEEEEESS----CSCEEEETTTC---EEEEECCSSC--CSSCEEEEEE
T ss_pred             cCCccceEEEeeccCCCccccceeeeeeecccceEEeecc----cccceeeeeeE---EeeecccCCC--CcccEEEEEC
Confidence            346899999875321    267999988999999976531    13457998543   4444444333  2345799999


Q ss_pred             CC--eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639         254 PQ--RWYQFSALSAPDRDQWIQAVQTGF  279 (321)
Q Consensus       254 ~~--r~~~f~A~s~~e~~~Wv~aL~~ai  279 (321)
                      |+  .+..|+|.+..+.+.|..||+.+|
T Consensus        76 pDG~~t~iLR~kD~a~A~~WF~Aihs~i  103 (105)
T d2adza1          76 ADGQDAVFLRAKDEASARSWAGAIQAQI  103 (105)
T ss_dssp             TTTTEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred             CCCCceEEEEcCCHHHHHHHHHHHHHhh
Confidence            85  677777777777777777777654

>d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dbl's big sister, Dbs
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.51  E-value=0.011  Score=45.66  Aligned_cols=78  Identities=13%  Similarity=0.225  Sum_probs=55.9

Q ss_pred             ceeeEEEEeccCCeEEeecC-CCC----------CceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEEeCCh
Q psy9639          73 YHPRRFVLNEINDTIKYYVK-EKK----------EPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEES  141 (321)
Q Consensus        73 wk~R~fvL~~~~~~L~Yy~~-~~~----------~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~  141 (321)
                      =+.|+|.|.  ++.|.|=+. ...          ..++.|.++++..+-  ...+.+..|.|.  ..++...|.|+|.|+
T Consensus        40 ~~~R~~FLF--~~~Li~cK~~~~~~~~~~~~~~y~~k~~~~~~~~~v~~--~~~~~~~~f~~~--~~~~~~~~~l~a~s~  113 (147)
T d1kz7a2          40 PMQRHLFLH--EKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITE--NVKGDTKKFEIW--YNAREEVYIIQAPTP  113 (147)
T ss_dssp             CEEEEEEEE--SSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEEC--CBTTBTTEEEEE--ETTTTEEEEEECSSH
T ss_pred             CceEEEEEe--cCcEEEEEecccCCcccccCceEEEeeEEecCCceeEe--cCCCCcceEEEE--eCCCCcEEEEEeCCH
Confidence            478999999  889988765 321          236788888885432  223445555553  355668899999999


Q ss_pred             HHHHHHHHHHHhhhh
Q psy9639         142 QSIMNWYHAIRNAKF  156 (321)
Q Consensus       142 ~e~~~W~~aLr~a~~  156 (321)
                      ++...|+.+|+.+..
T Consensus       114 eeK~~W~~~I~~~l~  128 (147)
T d1kz7a2         114 EIKAAWVNAIRKVLT  128 (147)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999987643

>d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: UNC-89
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.10  E-value=0.011  Score=44.04  Aligned_cols=93  Identities=10%  Similarity=0.092  Sum_probs=60.3

Q ss_pred             ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC--CCC----CceeEEeccceEEEeccCCCCCCceeEEEEeecCc-
Q psy9639          58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK--EKK----EPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGS-  130 (321)
Q Consensus        58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~--~~~----~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~-  130 (321)
                      .+.|.+....+..+ =+.|++.|.  ++.|.|.+.  ...    ..|+.|+|+++...-.   .|.+..|.|.....+. 
T Consensus        11 l~~~~f~v~~~~~k-~k~R~vFLF--~~~ll~~K~~~~~~~~~y~~K~~i~l~~~~v~e~---~gd~~~F~i~~~~~~~~   84 (119)
T d1fhoa_          11 IRHDAFQVWEGDEP-PKLRYVFLF--RNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQH---TTDEDTIVLQPQEPGLP   84 (119)
T ss_dssp             SEEEEEEECSTTCS-CEEEEEEEE--TTEEEEEEECCSSSSCCCSSCCEEESSSCEEEEE---CTTCCEEEEECCSTTCC
T ss_pred             EEEeEEEEEeCCCC-ceEEEEEEE--cCeEEEEEeccCCCCceEEEecEEECCceEEEEc---CCCCcEEEEEeCCCCCC
Confidence            34566665544433 446888887  788888875  222    3489999999865433   3666777664222111 


Q ss_pred             --eEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         131 --TRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       131 --~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                        ...+-++|.|+++...|+..|+.+.-
T Consensus        85 ~~~~~~~~~a~s~~~K~~Wv~~I~e~~~  112 (119)
T d1fhoa_          85 SFRIKPKDFETSEYVRKAWLRDIAEEQE  112 (119)
T ss_dssp             CBCCCCCSSSSCSHHHHHHHHHHHTCCH
T ss_pred             cceEEEEEecCCHHHHHHHHHHHHHHHH
Confidence              12345677899999999999987643

>d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.46  E-value=0.099  Score=39.22  Aligned_cols=35  Identities=9%  Similarity=-0.039  Sum_probs=22.1

Q ss_pred             CCcceEEEEEe-CCeeEeeeCCCCCCcceeEEcccccC
Q psy9639         194 DAYRKRWFTLD-YRKLMYHEEPLSAYPKGEIFLGHCSD  230 (321)
Q Consensus       194 ~~WkkRwfvL~-~~~L~Yyk~~~~~~~~g~i~L~~~~~  230 (321)
                      ..-+.+.|.|+ ++...|++++.  .....|+|..+.+
T Consensus        21 ~~~~~~~frlD~~g~~L~W~~~~--k~~~~l~i~~I~e   56 (131)
T d2zkmx3          21 TVASPVILRVDPKGYYLYWTYQS--KEMEFLDITSIRD   56 (131)
T ss_dssp             CCEEEEEEEECTTSCEEEEEETT--SCEEEEEGGGEEE
T ss_pred             CccceEEEEECCCCCEEEEECCC--CceeEEEecceee
Confidence            45677889998 34444555543  2456788877644

>d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.72  E-value=0.42  Score=35.53  Aligned_cols=92  Identities=9%  Similarity=-0.009  Sum_probs=61.4

Q ss_pred             EEeecCCCCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEec---cCCC-----------------CCCceeE
Q psy9639          63 LMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIA---PSKI-----------------EHPHSLQ  122 (321)
Q Consensus        63 L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~---~~~~-----------------~~~~~~~  122 (321)
                      +.|-......-+.+.|-|.+++..|.| .+. ......|+|..+..+..   +...                 -.+.+|.
T Consensus        13 f~K~~~~~~~~~~~~frlD~~g~~L~W-~~~-~k~~~~l~i~~I~evR~G~~~~~~k~~kl~~~~~~~~~~~~~e~~~ft   90 (131)
T d2zkmx3          13 FIKWDDETTVASPVILRVDPKGYYLYW-TYQ-SKEMEFLDITSIRDTRFGKFAKMPKSQKLRDVFNMDFPDNSFLLKTLT   90 (131)
T ss_dssp             EEEECTTTCCEEEEEEEECTTSCEEEE-EET-TSCEEEEEGGGEEEEEEGGGSCCCCSHHHHHHTTCSSTTCCGGGTEEE
T ss_pred             EEEEcCCCCccceEEEEECCCCCEEEE-ECC-CCceeEEEecceeeEEeccccCCccHHHHhhhhhccCcCCCccccEEE
Confidence            445444556678899999975555544 442 22356899999977642   1100                 1224788


Q ss_pred             EEEeecC-ceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639         123 LTFMKDG-STRHIYVYHEESQSIMNWYHAIRNAKF  156 (321)
Q Consensus       123 i~~~~~~-~~R~~~l~a~s~~e~~~W~~aLr~a~~  156 (321)
                      |+|..+. +-+.++|.|.|.++...|+..|+....
T Consensus        91 Ivyg~~~v~l~~l~lVA~s~~~a~~W~~gL~~L~~  125 (131)
T d2zkmx3          91 VVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVK  125 (131)
T ss_dssp             EEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred             EEECCCcccceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence            8876543 348889999999999999999986543

>d1zsqa1 b.55.1.8 (A:74-198) Myotubularin-related protein 2, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: GRAM domain
domain: Myotubularin-related protein 2, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.47  E-value=2.8  Score=30.48  Aligned_cols=75  Identities=9%  Similarity=0.080  Sum_probs=42.7

Q ss_pred             EEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-eEEEEEcC-CHHHHHHHHHHHhh
Q psy9639         201 FTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-RWYQFSAL-SAPDRDQWIQAVQT  277 (321)
Q Consensus       201 fvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-r~~~f~A~-s~~e~~~Wv~aL~~  277 (321)
                      ..|++-.|.+-..+.+......|+|+.++....+...  .......+.++|.+.+ |.+.|.-. +..+...|.++|+.
T Consensus        32 L~lTnyrliF~~~~~~~~~~~~ipl~~I~~v~k~~~~--~~~~~~~~~L~I~CKDfr~~~f~f~~e~~~~~~v~~~L~~  108 (125)
T d1zsqa1          32 LTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGA--SSRGENSYGLETVCKDIRNLRFAHKPEGRTRRSIFENLMK  108 (125)
T ss_dssp             EEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCT--TCCSTTCSEEEEEETTTEEEEEECCGGGCCHHHHHHHHHH
T ss_pred             EEEEeeEEEEEcCCCCccEEEEeccceeeeeeecccc--cccCCccccEEEEeccCeEEEEEEcCCccHHHHHHHHHHH
Confidence            4567777766555555555677888877554333211  1112345789999875 98885431 22333344444444

>d1foea2 b.55.1.1 (A:1240-1401) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.25  E-value=6.4  Score=29.48  Aligned_cols=63  Identities=14%  Similarity=0.223  Sum_probs=33.9

Q ss_pred             ceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhccccccccCceEEEEecCCHHH
Q psy9639         220 KGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPD  299 (321)
Q Consensus       220 ~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~~~l~~~~~~~~l~a~s~~e  299 (321)
                      +-.||+..    ..|+.....+ ....+.++|++-.                        +..-..|.+.|.|||.+++.
T Consensus        93 r~mIP~~a----lQVR~~~~~~-~es~~vwEiiH~k------------------------Se~egRpE~vfqlc~St~E~  143 (162)
T d1foea2          93 RHMIPTEA----LQVRALPSAD-AEANAVCEIVHVK------------------------SESEGRPERVFHLCCSSPES  143 (162)
T ss_dssp             EEEEEGGG----EEEECCCCTT-TTSCCEEEEEECC------------------------BTGGGBCCEEEEEEESSHHH
T ss_pred             EEEeeeee----eEeecccccC-CCcceEEEEEeec------------------------ccccCCcceEEEEecCCHHH
Confidence            45778754    5566643222 2456788888621                        00011123333366666666


Q ss_pred             HHHHHHHHHHhh
Q psy9639         300 RDQWIQAVQTVL  311 (321)
Q Consensus       300 ~~~Wi~al~~~i  311 (321)
                      +.+.+++|+..+
T Consensus       144 K~~flK~Ir~il  155 (162)
T d1foea2         144 RKDFLKSVHSIL  155 (162)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            666666666654