Psyllid ID: psy9655

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90------
Protein Sequence
MVRDLTSVTYVTQRSARLSSGVQRSMESSEKENRENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL
Secondary Structure (PSIPRED)
cccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEccccHHHccccccccccccHHHHHcHHccccccccccccEEccccccccccccccccccEEccHHHHHHHHHHHHccccEEcccc
Coil and Loop (DISEMBL)
MVRDLTSVTYVTQRSARlssgvqrsmessekenrengqnqivsepptdrtvsynrpvppnpslsctycsrAFKKRSDLTRHirshtkekpfkvrsl
Flexible Loop (DISEMBL)
mvrdltsvtyvtqrsarlssgvqrsmessekenrengqnqivsepptdrtvsynrpvppnpslsctyCSRAFKKRSDltrhirshtkekpfkvrsl
Low Complexity Region (SEG)
MVRDLTSVTYVTQRSARLSSGVQRSMESSEKENRENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL
Disordered region (IsUnstruct)
****************************************************************CTYC****************************
Disordered Region (DISOPRED)
*V*D**S*********************************************************CTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS*
Disordered Region (DISEMBL)
MVRDLTSVTYVTQ**************************QIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHT**********
Disordered Region (DISPRO)
***DLTSVT*VTQR**********************************RTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV**L
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVRDLTSVTYVTQRSARLSSGVQRSMESSEKENRENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	96	2.2.26 [Sep-21-2011]
Q9UL36	1845	Zinc finger protein 236 O	yes	N/A	0.354	0.018	0.571	9e-06
Q4V8R6	719	Transcription factor E4F1	yes	N/A	0.281	0.037	0.642	3e-05
Q9BYN7	854	Zinc finger protein 341 O	no	N/A	0.322	0.036	0.580	3e-05
Q8CCE9	783	Transcription factor E4F1	no	N/A	0.260	0.031	0.571	5e-05
Q96MU6	729	Zinc finger protein 778 O	no	N/A	0.281	0.037	0.516	0.0002
Q9NQX0	595	Putative histone-lysine N	no	N/A	0.322	0.052	0.548	0.0002
A6QPM3	590	Putative histone-lysine N	no	N/A	0.322	0.052	0.548	0.0002
Q3UZD5	596	Putative histone-lysine N	no	N/A	0.322	0.052	0.548	0.0002
Q5T5D7	378	Zinc finger protein 684 O	no	N/A	0.479	0.121	0.367	0.0002
Q04545	1251	Probable transcription fa	yes	N/A	0.541	0.041	0.375	0.0003

>sp|Q9UL36|ZN236_HUMAN Zinc finger protein 236 OS=Homo sapiens GN=ZNF236 PE=2 SV=2

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 25/35 (71%)

Query: 59   PNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV 93
            P  +  CTYC ++FKK SDL RH+R HT EKP+K 
Sbjct: 1163 PKHANCCTYCPKSFKKPSDLVRHVRIHTGEKPYKC 1197

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q4V8R6|E4F1_DANRE Transcription factor E4F1 OS=Danio rerio GN=e4f1 PE=2 SV=1

 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/28 (64%), Positives = 22/28 (78%)

Query: 65  CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
           C +CSR F+++S L RHIR HT EKPFK
Sbjct: 479 CQHCSRGFREKSALVRHIRHHTGEKPFK 506

May function as a transcriptional repressor. May also function as a ubiquitin ligase. Functions in cell survival and proliferation through control of the cell cycle.

Danio rerio (taxid: 7955)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q9BYN7|ZN341_HUMAN Zinc finger protein 341 OS=Homo sapiens GN=ZNF341 PE=2 SV=2

 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)

Query: 63  LSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV 93
           L C+YC ++F K  DL +HIRSHT EKPF+ 
Sbjct: 322 LKCSYCDKSFTKNFDLQQHIRSHTGEKPFQC 352

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8CCE9|E4F1_MOUSE Transcription factor E4F1 OS=Mus musculus GN=E4f1 PE=1 SV=2

 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 16/28 (57%), Positives = 21/28 (75%)

Query: 65  CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
           C +CSR F+++  L RH+R HT EKPFK
Sbjct: 548 CQFCSRGFREKGSLVRHVRHHTGEKPFK 575

May function as a transcriptional repressor. May also function as a ubiquitin ligase mediating ubiquitination of chromatin-associated TP53. Functions in cell survival and proliferation through control of the cell cycle. Functions in the p53 and pRB tumor suppressor pathways and regulates the cyclin CCNA2 transcription.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q96MU6|ZN778_HUMAN Zinc finger protein 778 OS=Homo sapiens GN=ZNF778 PE=2 SV=3

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)

Query: 64  SCTYCSRAFKKRSDLTRHIRSHTKEKPFKVR 94
           +C+YC +AF  R  LTRH+R+HT EKP+  +
Sbjct: 394 TCSYCGKAFTVRCGLTRHVRTHTGEKPYTCK 424

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9NQX0|PRDM6_HUMAN Putative histone-lysine N-methyltransferase PRDM6 OS=Homo sapiens GN=PRDM6 PE=2 SV=2

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 19/31 (61%)

Query: 63  LSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV 93
             C YC RAF   + L  HIR+HT EKPFK 
Sbjct: 529 FKCGYCGRAFAGATTLNNHIRTHTGEKPFKC 559

Putative histone methyltransferase that acts as a transcriptional repressor of smooth muscle gene expression. Promotes the transition from differentiated to proliferative smooth muscle by suppressing differentiation and maintaining the proliferative potential of vascular smooth muscle cells. Also plays a role in endothelial cells by inhibiting endothelial cell proliferation, survival and differentiation. It is unclear whether it has histone methyltransferase activity in vivo. According to some authors, it does not act as a histone methyltransferase by itself and represses transcription by recruiting EHMT2/G9a. According to others, it possesses histone methyltransferase activity when associated with other proteins and specifically methylates 'Lys-20' of histone H4 in vitro. 'Lys-20' methylation represents a specific tag for epigenetic transcriptional repression.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

>sp|A6QPM3|PRDM6_BOVIN Putative histone-lysine N-methyltransferase PRDM6 OS=Bos taurus GN=PRDM6 PE=2 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 19/31 (61%)

Query: 63  LSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV 93
             C YC RAF   + L  HIR+HT EKPFK 
Sbjct: 524 FKCGYCGRAFAGATTLNNHIRTHTGEKPFKC 554

Putative histone methyltransferase that acts as a transcriptional repressor of smooth muscle gene expression. Promotes the transition from differentiated to proliferative smooth muscle by suppressing differentiation and maintaining the proliferative potential of vascular smooth muscle cells. Also plays a role in endothelial cells by inhibiting endothelial cell proliferation, survival and differentiation. It is unclear whether it has histone methyltransferase activity in vivo. According to some authors, it does not act as a histone methyltransferase by itself and represses transcription by recruiting EHMT2/G9a. According to others, it possesses histone methyltransferase activity when associated with other proteins and specifically methylates 'Lys-20' of histone H4 in vitro. 'Lys-20' methylation represents a specific tag for epigenetic transcriptional repression.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

>sp|Q3UZD5|PRDM6_MOUSE Putative histone-lysine N-methyltransferase PRDM6 OS=Mus musculus GN=Prdm6 PE=1 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 19/31 (61%)

Query: 63  LSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV 93
             C YC RAF   + L  HIR+HT EKPFK 
Sbjct: 530 FKCGYCGRAFAGATTLNNHIRTHTGEKPFKC 560

Putative histone methyltransferase that acts as a transcriptional repressor of smooth muscle gene expression. Promotes the transition from differentiated to proliferative smooth muscle by suppressing differentiation and maintaining the proliferative potential of vascular smooth muscle cells. Also plays a role in endothelial cells by inhibiting endothelial cell proliferation, survival and differentiation. It is unclear whether it has histone methyltransferase activity in vivo. According to PubMed:16537907, it does not act as a histone methyltransferase by itself and represses transcription by recruiting EHMT2/G9a. According to PubMed:17662997, it possesses histone methyltransferase activity when associated with other proteins and specifically methylates 'Lys-20' of histone H4 in vitro. 'Lys-20' methylation represents a specific tag for epigenetic transcriptional repression.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

>sp|Q5T5D7|ZN684_HUMAN Zinc finger protein 684 OS=Homo sapiens GN=ZNF684 PE=2 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 28/49 (57%)

Query: 45  PPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV 93
           PP    + YNR      +  C+ C +AFKK+    RH ++HT++KPF+ 
Sbjct: 141 PPNLDLLKYNRSYTVENAYECSECGKAFKKKFHFIRHEKNHTRKKPFEC 189

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q04545|TDA9_YEAST Probable transcription factor TDA9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TDA9 PE=1 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 36 NGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPF 91
          N + Q++  P   RT+  ++P P      C  C+R F ++  L RH R+HT EKPF
Sbjct: 38 NDKIQVLPIPKKSRTIKTDKPRP----FLCHICTRGFVRQEHLKRHQRAHTNEKPF 89

DNA-binding protein that acts probably as a transcription factor.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
71895013	576	zinc finger protein 341 [Gallus gallus]	0.364	0.060	0.628	8e-06
449486147	930	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.416	0.043	0.575	2e-05
339251826	1292	zinc finger protein [Trichinella spirali	0.395	0.029	0.619	2e-05
390343041	1918	PREDICTED: zinc finger protein 236 [Stro	0.510	0.025	0.519	2e-05
449283980	778	Zinc finger protein 341, partial [Columb	0.375	0.046	0.611	2e-05
327271656	834	PREDICTED: zinc finger protein 341-like	0.375	0.043	0.583	6e-05
351710554	503	Zinc finger protein 449, partial [Hetero	0.510	0.097	0.410	8e-05
260816253	84	hypothetical protein BRAFLDRAFT_170751 [	0.427	0.488	0.512	9e-05
194875605	308	GG13232 [Drosophila erecta] gi|190655413	0.593	0.185	0.409	9e-05
410905017	1769	PREDICTED: zinc finger protein 236-like	0.260	0.014	0.677	0.0001

>gi|71895013|ref|NP_001026020.1| zinc finger protein 341 [Gallus gallus] gi|53132296|emb|CAG31891.1| hypothetical protein RCJMB04_13c20 [Gallus gallus]

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 26/35 (74%)

Query: 58  PPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
           P +P L CTYC +AF K  DL +HIRSHT EKPF+
Sbjct: 308 PKSPKLKCTYCDKAFTKNFDLQQHIRSHTGEKPFQ 342

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|449486147|ref|XP_004176560.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 341 [Taeniopygia guttata]

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 27/40 (67%)

Query: 54  NRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV 93
           N   P +P L CTYC +AF K  DL +HIRSHT EKPF+ 
Sbjct: 395 NESKPKSPKLKCTYCDKAFTKNFDLQQHIRSHTGEKPFQC 434

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|339251826|ref|XP_003372935.1| zinc finger protein [Trichinella spiralis] gi|316968678|gb|EFV52931.1| zinc finger protein [Trichinella spiralis]

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/42 (61%), Positives = 28/42 (66%), Gaps = 4/42 (9%)

Query: 56   PVPPNPSL----SCTYCSRAFKKRSDLTRHIRSHTKEKPFKV 93
            PV   PSL     C YCSR FKKR DL RHIR+HT EKPF+ 
Sbjct: 1125 PVAKLPSLPGKHVCQYCSRPFKKRCDLVRHIRTHTGEKPFQC 1166

Source: Trichinella spiralis

Species: Trichinella spiralis

Genus: Trichinella

Family: Trichinellidae

Order: Trichocephalida

Class: Enoplea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|390343041|ref|XP_003725784.1| PREDICTED: zinc finger protein 236 [Strongylocentrotus purpuratus]

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 33/52 (63%), Gaps = 3/52 (5%)

Query: 42   VSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV 93
            VSE  T   V  +RP  PN    C +CS++FKK  DL RH+R+HT EKPFK 
Sbjct: 1123 VSEVLTQEDVLKSRPNFPN---RCIHCSKSFKKPCDLVRHVRTHTGEKPFKC 1171

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|449283980|gb|EMC90563.1| Zinc finger protein 341, partial [Columba livia]

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 26/36 (72%)

Query: 58  PPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV 93
           P +P L CTYC +AF K  DL +HIRSHT EKPF+ 
Sbjct: 246 PKSPKLKCTYCDKAFTKNFDLQQHIRSHTGEKPFQC 281

Source: Columba livia

Species: Columba livia

Genus: Columba

Family: Columbidae

Order: Columbiformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|327271656|ref|XP_003220603.1| PREDICTED: zinc finger protein 341-like [Anolis carolinensis]

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 25/36 (69%)

Query: 58  PPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV 93
           P +P L CTYC + F K  DL +HIRSHT EKPF+ 
Sbjct: 299 PKSPKLKCTYCDKTFTKNFDLQQHIRSHTGEKPFQC 334

Source: Anolis carolinensis

Species: Anolis carolinensis

Genus: Anolis

Family: Iguanidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|351710554|gb|EHB13473.1| Zinc finger protein 449, partial [Heterocephalus glaber]

 Score = 51.2 bits (121), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 45  PPTDRTVSYNRPVP-------PNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV 93
           PP  +  +YNRP+P         P+  C  C R F  +SDL +H  +HTKEKPF+ 
Sbjct: 311 PPCAQQFAYNRPLPCYPKIQTGEPAYKCHKCGRQFLHQSDLDKHQHTHTKEKPFQC 366

Source: Heterocephalus glaber

Species: Heterocephalus glaber

Genus: Heterocephalus

Family: Bathyergidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260816253|ref|XP_002602886.1| hypothetical protein BRAFLDRAFT_170751 [Branchiostoma floridae] gi|229288199|gb|EEN58898.1| hypothetical protein BRAFLDRAFT_170751 [Branchiostoma floridae]

 Score = 51.2 bits (121), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 27/41 (65%)

Query: 53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV 93
          + +P+P    L CTYC + F K  DL +HIRSHT EKPF+ 
Sbjct: 23 HCQPMPQQQPLKCTYCDKMFSKNFDLQQHIRSHTGEKPFQC 63

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|194875605|ref|XP_001973630.1| GG13232 [Drosophila erecta] gi|190655413|gb|EDV52656.1| GG13232 [Drosophila erecta]

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 4/61 (6%)

Query: 33  NRENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
           N E   + I  EP  ++    NR     PS SC+YC + ++ RS L+ H+RSHT E+PFK
Sbjct: 107 NLEAVDDNIGFEPDINK----NRKAKEKPSFSCSYCPKTYQARSSLSVHMRSHTGERPFK 162

Query: 93  V 93
            
Sbjct: 163 C 163

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|410905017|ref|XP_003965988.1| PREDICTED: zinc finger protein 236-like [Takifugu rubripes]

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 23/31 (74%)

Query: 64  SCTYCSRAFKKRSDLTRHIRSHTKEKPFKVR 94
            C YCS+ FKK SDL RHIR HT EKPFK +
Sbjct: 446 GCLYCSKEFKKPSDLVRHIRIHTHEKPFKCK 476

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
UNIPROTKB|F1N9E6	529	ZNF341 "Uncharacterized protei	0.364	0.066	0.628	6.3e-09
UNIPROTKB|F1NFT7	777	ZNF341 "Uncharacterized protei	0.364	0.045	0.628	1.8e-08
ZFIN|ZDB-GENE-060503-906	300	si:dkey-20i20.7 "si:dkey-20i20	0.687	0.22	0.417	7.6e-08
ZFIN|ZDB-GENE-060503-623	228	si:dkey-20i20.3 "si:dkey-20i20	0.687	0.289	0.388	2.1e-07
ZFIN|ZDB-GENE-060503-717	120	si:dkey-20i20.4 "si:dkey-20i20	0.666	0.533	0.348	3.8e-07
ZFIN|ZDB-GENE-050208-785	320	si:dkey-15h8.7 "si:dkey-15h8.7	0.708	0.212	0.371	5.2e-07
ZFIN|ZDB-GENE-060503-58	499	si:dkey-20i20.11 "si:dkey-20i2	0.666	0.128	0.378	8.7e-07
ZFIN|ZDB-GENE-060503-435	369	si:dkey-20i20.15 "si:dkey-20i2	0.729	0.189	0.36	8.8e-07
ZFIN|ZDB-GENE-060503-905	208	si:dkey-20i20.10 "si:dkey-20i2	0.708	0.326	0.342	9.7e-07
ZFIN|ZDB-GENE-060503-245	215	si:dkey-20i20.13 "si:dkey-20i2	0.687	0.306	0.323	1.1e-06

UNIPROTKB|F1N9E6 ZNF341 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 128 (50.1 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
 Identities = 22/35 (62%), Positives = 26/35 (74%)

Query:    58 PPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
             P +P L CTYC +AF K  DL +HIRSHT EKPF+
Sbjct:   261 PKSPKLKCTYCDKAFTKNFDLQQHIRSHTGEKPFQ 295

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NFT7 ZNF341 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 128 (50.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
 Identities = 22/35 (62%), Positives = 26/35 (74%)

Query:    58 PPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
             P +P L CTYC +AF K  DL +HIRSHT EKPF+
Sbjct:   245 PKSPKLKCTYCDKAFTKNFDLQQHIRSHTGEKPFQ 279

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-060503-906 si:dkey-20i20.7 "si:dkey-20i20.7" [Danio rerio (taxid:7955)]

 Score = 128 (50.1 bits), Expect = 7.6e-08, P = 7.6e-08
 Identities = 28/67 (41%), Positives = 39/67 (58%)

Query:    27 ESSEKENRENGQNQIVSEPPTD-RTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSH 85
             E SE+ N +  ++QI SE  T   T S +       SL+CT C ++F ++S L  H+R H
Sbjct:    64 EESEELNEDEEKHQIKSEDKTQSETESISEKATAVNSLTCTQCGKSFTRKSGLNDHMRIH 123

Query:    86 TKEKPFK 92
             T EKPFK
Sbjct:   124 TGEKPFK 130

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-060503-623 si:dkey-20i20.3 "si:dkey-20i20.3" [Danio rerio (taxid:7955)]

 Score = 121 (47.7 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 26/67 (38%), Positives = 39/67 (58%)

Query:    27 ESSEKENRENGQNQIVSEPPTD-RTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSH 85
             + SE+ N +  ++Q+ SE  T   T S +       SL+CT C ++F ++S L  H+R H
Sbjct:    56 QESEELNEDEEKHQVKSEEKTQSETESISVKATAVNSLTCTQCGKSFTRKSGLNDHMRIH 115

Query:    86 TKEKPFK 92
             T EKPFK
Sbjct:   116 TGEKPFK 122

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-060503-717 si:dkey-20i20.4 "si:dkey-20i20.4" [Danio rerio (taxid:7955)]

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 23/66 (34%), Positives = 39/66 (59%)

Query:    27 ESSEKENRENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHT 86
             E SE+ + +  ++Q+ SE  T+ +VS  R V     L+CT C ++F ++  L  H+  HT
Sbjct:    24 EESEELSEDEEKHQVKSEDETEHSVSVKRTV--EKGLTCTECGKSFDRKYHLNHHMMIHT 81

Query:    87 KEKPFK 92
              EKP++
Sbjct:    82 GEKPYQ 87

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-050208-785 si:dkey-15h8.7 "si:dkey-15h8.7" [Danio rerio (taxid:7955)]

 Score = 121 (47.7 bits), Expect = 5.2e-07, P = 5.2e-07
 Identities = 26/70 (37%), Positives = 39/70 (55%)

Query:    23 QRSMESSEKENRENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHI 82
             + S E SE E + + +++  +EP T+  VS  R       L+CT C ++   + DL RH+
Sbjct:    59 EESEELSEDEEKHHVKSETKTEPNTEHGVSVERT--DIKGLTCTQCGKSLSSKYDLKRHM 116

Query:    83 RSHTKEKPFK 92
               HT EKPFK
Sbjct:   117 MIHTGEKPFK 126

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-060503-58 si:dkey-20i20.11 "si:dkey-20i20.11" [Danio rerio (taxid:7955)]

 Score = 122 (48.0 bits), Expect = 8.7e-07, P = 8.7e-07
 Identities = 25/66 (37%), Positives = 43/66 (65%)

Query:    27 ESSEKENRENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHT 86
             E SE+ N++  ++Q  ++  T+R++S  +    N SL+CT C ++F ++S L  H+R HT
Sbjct:    26 EESEELNQDEEKHQEKTQSETERSISM-KGTAVN-SLTCTQCGKSFTRKSTLNYHMRIHT 83

Query:    87 KEKPFK 92
              EKP+K
Sbjct:    84 GEKPYK 89

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-060503-435 si:dkey-20i20.15 "si:dkey-20i20.15" [Danio rerio (taxid:7955)]

 Score = 120 (47.3 bits), Expect = 8.8e-07, P = 8.8e-07
 Identities = 27/75 (36%), Positives = 44/75 (58%)

Query:    21 GVQRSMESSE-KENRENGQ--NQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSD 77
             GV    ES E  EN+E  Q  ++  ++  T++T+S  R       L+CT C ++FK +  
Sbjct:    19 GVMVKEESEELSENKEKHQVKSEEETQSETEQTISMKRKAVK--CLTCTQCGKSFKNKVT 76

Query:    78 LTRHIRSHTKEKPFK 92
             L+RH++ HT EKP++
Sbjct:    77 LSRHVKIHTGEKPYQ 91

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-060503-905 si:dkey-20i20.10 "si:dkey-20i20.10" [Danio rerio (taxid:7955)]

 Score = 114 (45.2 bits), Expect = 9.7e-07, P = 9.7e-07
 Identities = 24/70 (34%), Positives = 41/70 (58%)

Query:    23 QRSMESSEKENRENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHI 82
             + S E +E E +   + +  ++  T++++S  +    N SL+CT C + F ++S L  H+
Sbjct:    21 EESEELNEDEEKHQVKREEKTQSETEQSIS-EKGTALN-SLTCTQCGKTFTRKSGLDEHM 78

Query:    83 RSHTKEKPFK 92
             R HT EKPFK
Sbjct:    79 RIHTGEKPFK 88

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-060503-245 si:dkey-20i20.13 "si:dkey-20i20.13" [Danio rerio (taxid:7955)]

 Score = 114 (45.2 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 22/68 (32%), Positives = 38/68 (55%)

Query:    27 ESSEKENRENGQNQIVSEPPTDRTVSYN--RPVPPNPSLSCTYCSRAFKKRSDLTRHIRS 84
             E SE+ + +  ++Q+ SE  T      +    +P    L+CT C ++FK +  L  H+++
Sbjct:    30 EESEELSEDEEKHQVKSEEETQSEAEQSILMEIPAANDLTCTLCGKSFKNKHTLKSHMKT 89

Query:    85 HTKEKPFK 92
             HT EKP+K
Sbjct:    90 HTGEKPYK 97

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	96
pfam00096	22	pfam00096, zf-C2H2, Zinc finger, C2H2 type	1e-04
smart00355	23	smart00355, ZnF_C2H2, zinc finger	3e-04
pfam13894	24	pfam13894, zf-C2H2_4, C2H2-type zinc finger	0.002

>gnl|CDD|200998 pfam00096, zf-C2H2, Zinc finger, C2H2 type

 Score = 35.4 bits (82), Expect = 1e-04
 Identities = 9/22 (40%), Positives = 16/22 (72%)

Query: 64 SCTYCSRAFKKRSDLTRHIRSH 85
           C  C ++F ++S+L RH+R+H
Sbjct: 1  KCPDCGKSFSRKSNLKRHLRTH 22

The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter. Length = 22

>gnl|CDD|197676 smart00355, ZnF_C2H2, zinc finger

 Score = 34.7 bits (80), Expect = 3e-04
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 63 LSCTYCSRAFKKRSDLTRHIRSH 85
            C  C + FK +S L  H+R+H
Sbjct: 1  YRCPECGKVFKSKSALREHMRTH 23

Length = 23

>gnl|CDD|206065 pfam13894, zf-C2H2_4, C2H2-type zinc finger

 Score = 32.6 bits (74), Expect = 0.002
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSH 85
          C  C ++F  +  L RH+R H
Sbjct: 3  CPLCGKSFSSKDALKRHLRKH 23

This family contains a number of divergent C2H2 type zinc fingers. Length = 24

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	96
KOG2462|consensus	279		99.49
KOG2462|consensus	279		99.43
KOG3623|consensus	1007		99.3
KOG3623|consensus	1007		99.05
PHA02768	55	hypothetical protein; Provisional	99.01
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.91
PHA00616	44	hypothetical protein	98.91
KOG3576|consensus	267		98.87
KOG1074|consensus	958		98.62
KOG1074|consensus	958		98.53
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.23
PHA00733	128	hypothetical protein	98.08
PHA00732	79	hypothetical protein	97.88
KOG3576|consensus	267		97.87
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.74
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.72
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.66
PRK04860	160	hypothetical protein; Provisional	97.64
smart00355	26	ZnF_C2H2 zinc finger.	97.43
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.38
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.2
KOG3608|consensus	467		97.15
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.92
PLN03086	567	PRLI-interacting factor K; Provisional	96.9
PLN03086	567	PRLI-interacting factor K; Provisional	96.87
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.41
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.31
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.27
PHA02768	55	hypothetical protein; Provisional	95.61
KOG3608|consensus	467		95.59
PHA00733	128	hypothetical protein	95.18
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.68
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.2
COG5189	423	SFP1 Putative transcriptional repressor regulating	93.81
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	93.68
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	93.32
KOG3993|consensus	500		93.01
KOG2893|consensus	341		90.93
COG1592	166	Rubrerythrin [Energy production and conversion]	90.63
KOG3993|consensus	500		90.43
COG5048	467	FOG: Zn-finger [General function prediction only]	89.02
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	87.08
COG4049	65	Uncharacterized protein containing archaeal-type C	87.06
COG5048	467	FOG: Zn-finger [General function prediction only]	86.75
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	85.87
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	85.68
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	84.99
KOG4167|consensus	907		80.28

>KOG2462|consensus

Probab=99.49  E-value=1.3e-14  Score=94.29  Aligned_cols=62  Identities=19%  Similarity=0.198  Sum_probs=53.0

Q ss_pred             ccCCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          35 ENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .++....+.+...+.+..|.++|+|+|||.|..|+|+|..+++|+.|+++|.+.|+|+|..|
T Consensus       188 c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C  249 (279)
T KOG2462|consen  188 CECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRC  249 (279)
T ss_pred             cccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcch
Confidence            34455677888888888889999999999999999999999999999999999999999877

>KOG2462|consensus

Probab=99.43  E-value=2.5e-14  Score=92.96  Aligned_cols=54  Identities=28%  Similarity=0.316  Sum_probs=43.5

Q ss_pred             CCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          41 IVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+....-..+..|.++|+  -++.|.+|||.|.+++-|+.|+|+|||||||.|.+|
T Consensus       168 ~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC  221 (279)
T KOG2462|consen  168 GKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHC  221 (279)
T ss_pred             CceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcc
Confidence            333444445555666666  358899999999999999999999999999999998

>KOG3623|consensus

Probab=99.30  E-value=1.7e-13  Score=98.60  Aligned_cols=60  Identities=23%  Similarity=0.346  Sum_probs=55.1

Q ss_pred             CCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          37 GQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ++.+.+.+..++.+..|+--|+|.+||.|.+|.|+|+.+.+|..|+|.|.|||||.|+.|
T Consensus       897 CDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKC  956 (1007)
T KOG3623|consen  897 CDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKC  956 (1007)
T ss_pred             HHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhh
Confidence            344567788888889999999999999999999999999999999999999999999988

>KOG3623|consensus

Probab=99.05  E-value=4.3e-11  Score=86.50  Aligned_cols=39  Identities=36%  Similarity=0.668  Sum_probs=36.3

Q ss_pred             CCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          58 PPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        58 ~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ...+.|.|..|+|+|+.+.+|+.|+|+|.|||||.|+-|
T Consensus       277 a~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnC  315 (1007)
T KOG3623|consen  277 ALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNC  315 (1007)
T ss_pred             hhhccccccccchhhhhHHHHHhhheeecCCCCcCCccc
Confidence            345779999999999999999999999999999999987

>PHA02768 hypothetical protein; Provisional

Probab=99.01  E-value=1.3e-10  Score=58.99  Aligned_cols=32  Identities=25%  Similarity=0.642  Sum_probs=29.3

Q ss_pred             eecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          63 LSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        63 ~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      |.|..||+.|....+|..|+++|+  +||+|..|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C   37 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNC   37 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcc
Confidence            899999999999999999999999  67777665

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.91  E-value=8.2e-10  Score=48.26  Aligned_cols=20  Identities=50%  Similarity=0.853  Sum_probs=18.8

Q ss_pred             hHHHHHhhhCCCCCcccccC
Q psy9655          77 DLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        77 ~l~~h~~~htgekp~~C~~C   96 (96)
                      +|..|+++|+|+|||+|+.|
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C   20 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYC   20 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSS
T ss_pred             CHHHHhhhcCCCCCCCCCCC
Confidence            58899999999999999998

...

>PHA00616 hypothetical protein

Probab=98.91  E-value=5.2e-10  Score=54.34  Aligned_cols=34  Identities=21%  Similarity=0.504  Sum_probs=31.9

Q ss_pred             ceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      +|.|..||+.|..++.|..|++.|+|++||.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5899999999999999999999999999999863

>KOG3576|consensus

Probab=98.87  E-value=1.8e-10  Score=72.69  Aligned_cols=40  Identities=33%  Similarity=0.630  Sum_probs=34.8

Q ss_pred             CCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          57 VPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        57 ~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      |..-+.|.|..|||.|..-.+|++|+|+|||.|||+|..|
T Consensus       140 h~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c  179 (267)
T KOG3576|consen  140 HSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLC  179 (267)
T ss_pred             ccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhh
Confidence            4445567788899999999999999999999999999987

>KOG1074|consensus

Probab=98.62  E-value=1.1e-08  Score=75.03  Aligned_cols=35  Identities=37%  Similarity=0.786  Sum_probs=32.8

Q ss_pred             ceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ++.|.+|.|.|...+.|+.|+|.|||||||+|.+|
T Consensus       353 khkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvC  387 (958)
T KOG1074|consen  353 KHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVC  387 (958)
T ss_pred             cchhhhhHhhcCchhhhhhhhhccCCCCCeeeccc
Confidence            47799999999999999999999999999999988

>KOG1074|consensus

Probab=98.53  E-value=2.4e-08  Score=73.38  Aligned_cols=40  Identities=23%  Similarity=0.463  Sum_probs=26.0

Q ss_pred             CCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCC
Q psy9655          49 RTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        49 ~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htge   88 (96)
                      .+..|-++|+|+++|.|.+||++|.++.+|+.|+.+|.-.
T Consensus       620 aLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~  659 (958)
T KOG1074|consen  620 ALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAK  659 (958)
T ss_pred             hhhhhhhcccCcCccccccccchhccccchhhcccccccC
Confidence            3445556667777777777777777777777776666543

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.23  E-value=5.9e-07  Score=37.74  Aligned_cols=23  Identities=39%  Similarity=0.996  Sum_probs=21.6

Q ss_pred             eecccchhhccCCchHHHHHhhh
Q psy9655          63 LSCTYCSRAFKKRSDLTRHIRSH   85 (96)
Q Consensus        63 ~~C~~C~k~f~~~~~l~~h~~~h   85 (96)
                      |.|..|++.|..+..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999876

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00733 hypothetical protein

Probab=98.08  E-value=2.4e-06  Score=50.88  Aligned_cols=37  Identities=22%  Similarity=0.341  Sum_probs=32.6

Q ss_pred             CCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          58 PPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        58 ~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.++|.|..|++.|.....|..|++.|  +.+|.|..|
T Consensus        69 ~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~C  105 (128)
T PHA00733         69 KAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVC  105 (128)
T ss_pred             CCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCC
Confidence            3477899999999999999999999987  468999987

>PHA00732 hypothetical protein

Probab=97.88  E-value=6.7e-06  Score=45.03  Aligned_cols=32  Identities=25%  Similarity=0.337  Sum_probs=26.9

Q ss_pred             ceecccchhhccCCchHHHHHh-hhCCCCCcccccC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIR-SHTKEKPFKVRSL   96 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~-~htgekp~~C~~C   96 (96)
                      +|.|..|++.|....+|+.|++ .|++   +.|+.|
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~C   33 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVC   33 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCC
Confidence            4789999999999999999998 4764   578877

>KOG3576|consensus

Probab=97.87  E-value=6.8e-06  Score=52.29  Aligned_cols=57  Identities=19%  Similarity=0.283  Sum_probs=47.0

Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhh-hC----------CCCCcccccC
Q psy9655          40 QIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRS-HT----------KEKPFKVRSL   96 (96)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~-ht----------gekp~~C~~C   96 (96)
                      +.+.+...-..+.+.++|+|-+||.|..|+|+|.+.-.|..|.+. |.          .+|-|.|..|
T Consensus       151 cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedc  218 (267)
T KOG3576|consen  151 CGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDC  218 (267)
T ss_pred             ccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeeccc
Confidence            456666777888999999999999999999999999999999863 53          2566788776

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.74  E-value=2.8e-06  Score=36.90  Aligned_cols=22  Identities=23%  Similarity=0.617  Sum_probs=18.9

Q ss_pred             CCCCCCCCCceecccchhhccC
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKK   74 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~   74 (96)
                      +.+.|+++++|.|..|++.|..
T Consensus         5 H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    5 HMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHSSSSSEEESSSSEEESS
T ss_pred             HhhhcCCCCCCCCCCCcCeeCc
Confidence            4567899999999999999963

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.72  E-value=1.9e-05  Score=32.92  Aligned_cols=23  Identities=35%  Similarity=1.045  Sum_probs=19.5

Q ss_pred             eecccchhhccCCchHHHHHhhh
Q psy9655          63 LSCTYCSRAFKKRSDLTRHIRSH   85 (96)
Q Consensus        63 ~~C~~C~k~f~~~~~l~~h~~~h   85 (96)
                      |.|..|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            78999999999999999999875

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.66  E-value=2.4e-05  Score=33.97  Aligned_cols=25  Identities=36%  Similarity=0.720  Sum_probs=23.0

Q ss_pred             ceecccchhhccCCchHHHHHhhhC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~ht   86 (96)
                      +|.|..|++.|.....|..|++.|-
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5899999999999999999998874

>PRK04860 hypothetical protein; Provisional

Probab=97.64  E-value=4e-05  Score=47.26  Aligned_cols=32  Identities=22%  Similarity=0.441  Sum_probs=28.9

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      -+|.|. |+.   ....+..|.++|+|+++|.|..|
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C  149 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRC  149 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCC
Confidence            469998 998   67889999999999999999988

>smart00355 ZnF_C2H2 zinc finger

Probab=97.43  E-value=7.5e-05  Score=31.43  Aligned_cols=25  Identities=36%  Similarity=0.789  Sum_probs=22.3

Q ss_pred             eecccchhhccCCchHHHHHhhhCC
Q psy9655          63 LSCTYCSRAFKKRSDLTRHIRSHTK   87 (96)
Q Consensus        63 ~~C~~C~k~f~~~~~l~~h~~~htg   87 (96)
                      |.|..|++.|.....|..|++.|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhcc
Confidence            5799999999999999999998753

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.38  E-value=0.00024  Score=35.48  Aligned_cols=36  Identities=19%  Similarity=0.501  Sum_probs=25.4

Q ss_pred             CCCCCCCceecccchhhccCCchHHHHHhhhCCCCC
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKP   90 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp   90 (96)
                      ..+....+-.|+.|+..+.+..+|++|+.++-+.||
T Consensus        17 ~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   17 SKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             HhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            344567789999999999999999999988777776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.20  E-value=0.00027  Score=35.80  Aligned_cols=34  Identities=29%  Similarity=0.497  Sum_probs=26.5

Q ss_pred             ceecccchhhccCCchHHHHHhh-hCCC-CCcccccC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRS-HTKE-KPFKVRSL   96 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~-htge-kp~~C~~C   96 (96)
                      .|.|++|++ ......|..|... |.++ +.+.|++|
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC   37 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPIC   37 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCc
Confidence            389999999 4556789999754 7765 57899988

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG3608|consensus

Probab=97.15  E-value=0.00025  Score=48.60  Aligned_cols=34  Identities=41%  Similarity=0.745  Sum_probs=17.8

Q ss_pred             eecccchhhccCCchHHHHHhh-hCCCCCcccccC
Q psy9655          63 LSCTYCSRAFKKRSDLTRHIRS-HTKEKPFKVRSL   96 (96)
Q Consensus        63 ~~C~~C~k~f~~~~~l~~h~~~-htgekp~~C~~C   96 (96)
                      |.|+.|.-.....+.|..|++. |...|||+|+.|
T Consensus       264 ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~C  298 (467)
T KOG3608|consen  264 YKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDEC  298 (467)
T ss_pred             ccccccccCCCChHHHHHHHHhhhccCCCccccch
Confidence            3344444444444455555543 555677777665

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.92  E-value=0.00045  Score=29.21  Aligned_cols=23  Identities=30%  Similarity=0.836  Sum_probs=21.0

Q ss_pred             eecccchhhccCCchHHHHHhhh
Q psy9655          63 LSCTYCSRAFKKRSDLTRHIRSH   85 (96)
Q Consensus        63 ~~C~~C~k~f~~~~~l~~h~~~h   85 (96)
                      |.|..|++.|.....+..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999764

>PLN03086 PRLI-interacting factor K; Provisional

Probab=96.90  E-value=0.00067  Score=49.23  Aligned_cols=47  Identities=13%  Similarity=0.256  Sum_probs=26.7

Q ss_pred             CCCcCCCCCCCCCceecccchhhccC----------CchHHHHHhhhCCCCCcccccC
Q psy9655          49 RTVSYNRPVPPNPSLSCTYCSRAFKK----------RSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        49 ~~~~~~~~~~~~~~~~C~~C~k~f~~----------~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ....|...|.+.+++.|.+|++.|..          .+.|..|..++ |.+++.|..|
T Consensus       491 ~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~C  547 (567)
T PLN03086        491 QMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSC  547 (567)
T ss_pred             HHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEcccc
Confidence            33444455556666666666666631          23566666553 6666666655

>PLN03086 PRLI-interacting factor K; Provisional

Probab=96.87  E-value=0.00061  Score=49.43  Aligned_cols=34  Identities=18%  Similarity=0.397  Sum_probs=27.5

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +++.|. |++.+ .+..|..|+++|.+++|+.|..|
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC  510 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFC  510 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCC
Confidence            567788 88654 56788888888999999999887

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.41  E-value=0.0021  Score=43.64  Aligned_cols=37  Identities=24%  Similarity=0.671  Sum_probs=30.9

Q ss_pred             CCceeccc--chhhccCCchHHHHHhh-h------------------CCCCCcccccC
Q psy9655          60 NPSLSCTY--CSRAFKKRSDLTRHIRS-H------------------TKEKPFKVRSL   96 (96)
Q Consensus        60 ~~~~~C~~--C~k~f~~~~~l~~h~~~-h------------------tgekp~~C~~C   96 (96)
                      +|+|.|++  |.|.|+....|+-|+.. |                  ...|||.|+.|
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC  404 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVC  404 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceecccc
Confidence            48999998  99999999999999753 3                  12489999988

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.31  E-value=0.00075  Score=29.21  Aligned_cols=22  Identities=27%  Similarity=0.762  Sum_probs=20.2

Q ss_pred             eecccchhhccCCchHHHHHhh
Q psy9655          63 LSCTYCSRAFKKRSDLTRHIRS   84 (96)
Q Consensus        63 ~~C~~C~k~f~~~~~l~~h~~~   84 (96)
                      |.|..|++.|.....+..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999864

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.27  E-value=0.0027  Score=26.54  Aligned_cols=22  Identities=36%  Similarity=0.812  Sum_probs=17.6

Q ss_pred             eecccchhhccCCchHHHHHhhh
Q psy9655          63 LSCTYCSRAFKKRSDLTRHIRSH   85 (96)
Q Consensus        63 ~~C~~C~k~f~~~~~l~~h~~~h   85 (96)
                      |.|..|++... +..|..|++.|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            78999999888 88999999874

>PHA02768 hypothetical protein; Provisional

Probab=95.61  E-value=0.0011  Score=33.76  Aligned_cols=41  Identities=10%  Similarity=-0.014  Sum_probs=33.2

Q ss_pred             CCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHH
Q psy9655          37 GQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLT   79 (96)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~   79 (96)
                      ++.....+........|.++|+  ++|.|..|++.|.+.+.|.
T Consensus         8 C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          8 CPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4456667777788888899998  6799999999999887764

>KOG3608|consensus

Probab=95.59  E-value=0.0078  Score=41.56  Aligned_cols=40  Identities=18%  Similarity=0.479  Sum_probs=28.8

Q ss_pred             CCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      -.|...++|.|..|.+.|.+.+.|..|..+|. +--|.|..
T Consensus       285 ~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h  324 (467)
T KOG3608|consen  285 YRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEH  324 (467)
T ss_pred             hhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCC
Confidence            34556677888888888888888888877776 55566654

>PHA00733 hypothetical protein

Probab=95.18  E-value=0.0087  Score=35.63  Aligned_cols=47  Identities=13%  Similarity=0.188  Sum_probs=33.3

Q ss_pred             CCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhh
Q psy9655          37 GQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSH   85 (96)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~h   85 (96)
                      +......+........+.+.+  ..+|.|..|++.|.....|..|++..
T Consensus        76 C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~  122 (128)
T PHA00733         76 CPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKK  122 (128)
T ss_pred             CCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHh
Confidence            344555555555555555544  34699999999999999999998753

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.68  E-value=0.018  Score=24.48  Aligned_cols=21  Identities=29%  Similarity=0.749  Sum_probs=17.2

Q ss_pred             eecccchhhccCCchHHHHHhh
Q psy9655          63 LSCTYCSRAFKKRSDLTRHIRS   84 (96)
Q Consensus        63 ~~C~~C~k~f~~~~~l~~h~~~   84 (96)
                      ..|..||+.| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            5799999999 67888888753

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.20  E-value=0.03  Score=25.24  Aligned_cols=23  Identities=17%  Similarity=0.621  Sum_probs=20.1

Q ss_pred             ceecccchhhccCCchHHHHHhh
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRS   84 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~   84 (96)
                      +|.|..|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            48999999999998899998753

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=93.81  E-value=0.045  Score=37.42  Aligned_cols=28  Identities=18%  Similarity=0.388  Sum_probs=23.4

Q ss_pred             CCCCCCCceecccchhhccCCchHHHHH
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRHI   82 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h~   82 (96)
                      ......|||.|.+|+|.|+.--.|+-|.
T Consensus       391 ~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         391 IFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             cccccCCceeccccchhhccCccceecc
Confidence            3344569999999999999999999884

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=93.68  E-value=0.046  Score=30.18  Aligned_cols=24  Identities=42%  Similarity=1.025  Sum_probs=21.2

Q ss_pred             ceecccchhhccCCchHHHHHhhh
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSH   85 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~h   85 (96)
                      .+.|..|++.|.....|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            599999999999999999999864

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=93.32  E-value=0.061  Score=24.32  Aligned_cols=22  Identities=14%  Similarity=0.449  Sum_probs=14.1

Q ss_pred             eecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          63 LSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        63 ~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      |.|..||..+....            .|+.|+.|
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~C   23 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVC   23 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCC
Confidence            67788887664322            56677766

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG3993|consensus

Probab=93.01  E-value=0.033  Score=39.30  Aligned_cols=25  Identities=28%  Similarity=0.720  Sum_probs=22.7

Q ss_pred             ceecccchhhccCCchHHHHHhhhC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~ht   86 (96)
                      -|.|.+|+|.|.+...|+.|+.+|-
T Consensus       356 i~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  356 IFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             eeecHHhhhhhHHHHHHHHhHHhhh
Confidence            5999999999999999999987763

>KOG2893|consensus

Probab=90.93  E-value=0.099  Score=34.49  Aligned_cols=28  Identities=36%  Similarity=0.714  Sum_probs=18.6

Q ss_pred             cccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          65 CTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        65 C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      |-+|++-|....-|.+|++.    |-|+|.+|
T Consensus        13 cwycnrefddekiliqhqka----khfkchic   40 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----KHFKCHIC   40 (341)
T ss_pred             eeecccccchhhhhhhhhhh----ccceeeee
Confidence            66677777777777776643    44677666

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=90.63  E-value=0.17  Score=31.56  Aligned_cols=22  Identities=23%  Similarity=0.369  Sum_probs=18.7

Q ss_pred             ceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .|.|.+||+.             |-|+-|-.|++|
T Consensus       134 ~~vC~vCGy~-------------~~ge~P~~CPiC  155 (166)
T COG1592         134 VWVCPVCGYT-------------HEGEAPEVCPIC  155 (166)
T ss_pred             EEEcCCCCCc-------------ccCCCCCcCCCC
Confidence            5999999874             567889999998

>KOG3993|consensus

Probab=90.43  E-value=0.13  Score=36.51  Aligned_cols=25  Identities=28%  Similarity=0.612  Sum_probs=22.6

Q ss_pred             ceecccchhhccCCchHHHHHhhhC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~ht   86 (96)
                      -|.|..|+|.|.-..+|.-|.|-|.
T Consensus       295 EYrCPEC~KVFsCPANLASHRRWHK  319 (500)
T KOG3993|consen  295 EYRCPECDKVFSCPANLASHRRWHK  319 (500)
T ss_pred             eecCCcccccccCchhhhhhhcccC
Confidence            3889999999999999999998774

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.02  E-value=0.38  Score=32.78  Aligned_cols=38  Identities=32%  Similarity=0.555  Sum_probs=19.0

Q ss_pred             CCCCC--Cceecc--cchhhccCCchHHHHHhhhCCCCCccc
Q psy9655          56 PVPPN--PSLSCT--YCSRAFKKRSDLTRHIRSHTKEKPFKV   93 (96)
Q Consensus        56 ~~~~~--~~~~C~--~C~k~f~~~~~l~~h~~~htgekp~~C   93 (96)
                      .|.++  +++.|.  .|++.|.+...+..|..+|++.++++|
T Consensus       313 ~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         313 NHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             ccccccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            34444  455555  455555555555555555555444443

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=87.08  E-value=0.44  Score=21.66  Aligned_cols=12  Identities=17%  Similarity=0.506  Sum_probs=8.6

Q ss_pred             ceecccchhhcc
Q psy9655          62 SLSCTYCSRAFK   73 (96)
Q Consensus        62 ~~~C~~C~k~f~   73 (96)
                      .|.|..||..+.
T Consensus         2 ~~~C~~CG~i~~   13 (34)
T cd00729           2 VWVCPVCGYIHE   13 (34)
T ss_pred             eEECCCCCCEeE
Confidence            378888887654

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=87.06  E-value=0.37  Score=24.58  Aligned_cols=27  Identities=30%  Similarity=0.650  Sum_probs=23.1

Q ss_pred             CCCCCceecccchhhccCCchHHHHHh
Q psy9655          57 VPPNPSLSCTYCSRAFKKRSDLTRHIR   83 (96)
Q Consensus        57 ~~~~~~~~C~~C~k~f~~~~~l~~h~~   83 (96)
                      ..|+.-+.|+.|+..|....+..+|.-
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVN   38 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhh
Confidence            356777899999999999999999974

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=86.75  E-value=0.23  Score=33.88  Aligned_cols=34  Identities=38%  Similarity=0.728  Sum_probs=31.7

Q ss_pred             CceecccchhhccCCchHHHHHh--hhCCC--CCcccc
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIR--SHTKE--KPFKVR   94 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~--~htge--kp~~C~   94 (96)
                      ..+.|..|...|.....|..|.+  .|+++  +|+.|.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p  325 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCP  325 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeee
Confidence            36889999999999999999999  89999  999998

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=85.87  E-value=0.73  Score=21.86  Aligned_cols=24  Identities=33%  Similarity=0.832  Sum_probs=15.3

Q ss_pred             CCceecccchhhccCC----chHHHHHh
Q psy9655          60 NPSLSCTYCSRAFKKR----SDLTRHIR   83 (96)
Q Consensus        60 ~~~~~C~~C~k~f~~~----~~l~~h~~   83 (96)
                      .....|..|++.+...    ++|..|++
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~   41 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLK   41 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHH
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhh
Confidence            4457999999988875    57888883

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=85.68  E-value=0.49  Score=28.39  Aligned_cols=27  Identities=37%  Similarity=0.786  Sum_probs=16.6

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEKP   90 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgekp   90 (96)
                      ....|-.||+.|+.   |++|++.|-|-.|
T Consensus        71 d~i~clecGk~~k~---LkrHL~~~~gltp   97 (132)
T PF05443_consen   71 DYIICLECGKKFKT---LKRHLRTHHGLTP   97 (132)
T ss_dssp             S-EE-TBT--EESB---HHHHHHHTT-S-H
T ss_pred             CeeEEccCCcccch---HHHHHHHccCCCH
Confidence            34789999999964   6999999866443

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>smart00614 ZnF_BED BED zinc finger

Probab=84.99  E-value=0.76  Score=22.55  Aligned_cols=25  Identities=36%  Similarity=0.926  Sum_probs=19.6

Q ss_pred             ceecccchhhccCC-----chHHHHHh-hhC
Q psy9655          62 SLSCTYCSRAFKKR-----SDLTRHIR-SHT   86 (96)
Q Consensus        62 ~~~C~~C~k~f~~~-----~~l~~h~~-~ht   86 (96)
                      .-.|..|++.+...     ++|.+|+. .|.
T Consensus        18 ~a~C~~C~~~l~~~~~~gTs~L~rHl~~~h~   48 (50)
T smart00614       18 RAKCKYCGKKLSRSSKGGTSNLRRHLRRKHP   48 (50)
T ss_pred             EEEecCCCCEeeeCCCCCcHHHHHHHHhHCc
Confidence            36899999988776     48889987 554

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>KOG4167|consensus

Probab=80.28  E-value=0.5  Score=35.84  Aligned_cols=25  Identities=24%  Similarity=0.603  Sum_probs=22.6

Q ss_pred             ceecccchhhccCCchHHHHHhhhC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~ht   86 (96)
                      .|.|..|+|.|..-..+..||++|.
T Consensus       792 iFpCreC~kvF~KiKSrNAHMK~Hr  816 (907)
T KOG4167|consen  792 IFPCRECGKVFFKIKSRNAHMKTHR  816 (907)
T ss_pred             eeehHHHHHHHHHHhhhhHHHHHHH
Confidence            4899999999999889999999885

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	96
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		8e-04
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		8e-04

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 62 SLSCTYCSRAFKKRSDLTRHIRSHTKEKPF 91
          S  C  C+RAF ++  L RH RSHT EKP+
Sbjct: 2  SFVCEVCTRAFARQEHLKRHYRSHTNEKPY 31

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 47 TDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV 93
          +D    + R         C  C ++F  + DLTRH R+HT EKP+K 
Sbjct: 34 SDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKC 80

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	96
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	9e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-07
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-07
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-08
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-04
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-08
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-07
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-08
1ard_A	29	Yeast transcription factor ADR1; transcription reg	7e-08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	5e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-07
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	9e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	9e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	7e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-05
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	7e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	9e-06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	9e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	3e-04
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	3e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	4e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	5e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	8e-04

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 49.0 bits (118), Expect = 1e-09
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C+RAF ++  L RH RSHT EKP+ 
Sbjct: 5  CEVCTRAFARQEHLKRHYRSHTNEKPYP 32

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 49.2 bits (117), Expect = 2e-09
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C    ++FK +  L  HIR HT EK   
Sbjct: 65 CPREGKSFKAKYKLVNHIRVHTGEKSGP 92

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 47.2 bits (113), Expect = 9e-09
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 65 CTY--CSRAFKKRSDLTRHIRSHTKEKPFK 92
          C +  C +AFKK + L  H  SHT++ P++
Sbjct: 4  CHFENCGKAFKKHNQLKVHQFSHTQQLPYE 33

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 39.9 bits (94), Expect = 5e-06
 Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 2/30 (6%)

Query: 65 CTY--CSRAFKKRSDLTRHIRSHTKEKPFK 92
          C +  C + F   S L RH + H      K
Sbjct: 34 CPHEGCDKRFSLPSRLKRHEKVHAGYPCKK 63

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 48.4 bits (116), Expect = 1e-08
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C    ++FK +  L  HIR HT EKPF 
Sbjct: 65 CPREGKSFKAKYKLVNHIRVHTGEKPFP 92

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 43.8 bits (104), Expect = 6e-07
 Identities = 6/28 (21%), Positives = 9/28 (32%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
             C R F    +L  H+       P +
Sbjct: 28 KKSCDRTFSTMHELVTHVTMEHVGGPEQ 55

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 43.4 bits (103), Expect = 7e-07
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 65  CTY--CSRAFKKRSDLTRHIRSHTKEKPFK 92
           C +  C + F +  +L  H R+HT EKPFK
Sbjct: 93  CPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 41.9 bits (99), Expect = 3e-06
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 65  CTY--CSRAFKKRSDLTRHIRSHTKEKPFK 92
           C +  C R F   SD  +H+  HT +K   
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGP 152

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 46.7 bits (112), Expect = 2e-08
 Identities = 15/28 (53%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C R F +   LT HIR+HT EKPF 
Sbjct: 37 CRICMRNFSRSDHLTTHIRTHTGEKPFA 64

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 43.2 bits (103), Expect = 3e-07
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 68 CSRAFKKRSDLTRHIRSHTKEKPFK 92
          C R F +   LTRHIR HT +KPF+
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQ 36

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 41.3 bits (98), Expect = 2e-06
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEK 89
          C  C R F +  +  RH + H ++K
Sbjct: 65 CDICGRKFARSDERKRHTKIHLRQK 89

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 45.5 bits (109), Expect = 4e-08
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C YC + F ++SD+ +H   HT EKP K
Sbjct: 32 CQYCGKRFHQKSDMKKHTFIHTGEKPHK 59

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 42.8 bits (102), Expect = 4e-07
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C ++FK+ S L+ H+  H+  +P+ 
Sbjct: 4  CKICGKSFKRSSTLSTHLLIHSDTRPYP 31

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 45.6 bits (109), Expect = 4e-08
 Identities = 15/28 (53%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C R F +   LT HIR+HT EKPF 
Sbjct: 6  CRICMRNFSRSDHLTTHIRTHTGEKPFA 33

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 7/28 (25%), Positives = 9/28 (32%), Gaps = 1/28 (3%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C R F +  +  RH        P  
Sbjct: 34 CDICGRKFARSDERKRHRDIQH-ILPIL 60

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 45.6 bits (109), Expect = 4e-08
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F+    L RH  SH+ EKP+ 
Sbjct: 10 CEICGKIFRDVYHLNRHKLSHSGEKPYS 37

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 40.6 bits (96), Expect = 4e-06
 Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKE--KPFK 92
          C  C   FK++  ++ H+RSH     KP+ 
Sbjct: 38 CPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 46.8 bits (112), Expect = 4e-08
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+   R FK +  L  H+R HT EKP K
Sbjct: 42 CSRELRPFKAQYMLVVHMRRHTGEKPHK 69

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 42.6 bits (101), Expect = 1e-06
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)

Query: 65 CTY--CSRAFKKRSDLTRHIRSHTKEKPFK 92
          CT+  C +++ +  +L  H+RSHT EKP+ 
Sbjct: 70 CTFEGCRKSYSRLENLKTHLRSHTGEKPYM 99

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 39.9 bits (94), Expect = 1e-05
 Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 3/31 (9%)

Query: 65 CTYCSRAFKKRSDLTRHI---RSHTKEKPFK 92
             CS+ F  +  L  HI     H + K F 
Sbjct: 6  WDGCSQEFDSQEQLVHHINSEHIHGERKEFV 36

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 38.7 bits (91), Expect = 5e-05
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)

Query: 65  CTY--CSRAFKKRSDLTRHI-RSHTKEKPFK 92
           C +  CS+AF   SD  +H  R+H+ EKP+ 
Sbjct: 100 CEHEGCSKAFSNASDRAKHQNRTHSNEKPYV 130

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 46.0 bits (110), Expect = 5e-08
 Identities = 14/28 (50%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF + S L RH   HT EKPF+
Sbjct: 37 CAECGKAFVESSKLKRHQLVHTGEKPFQ 64

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 44.0 bits (105), Expect = 2e-07
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 68  CSRAFKKRSDLTRHIRSHTKEKPFK 92
           C++ F + ++L  HI +H K K  +
Sbjct: 100 CNKKFAQSTNLKSHILTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 65 CTY--CSRAFKKRSDLTRHIRSHTKEKPFK 92
          CT+  C + F    +L  H+R HT ++P+ 
Sbjct: 65 CTFEGCGKRFSLDFNLRTHVRIHTGDRPYV 94

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 34.8 bits (81), Expect = 8e-04
 Identities = 6/30 (20%), Positives = 15/30 (50%), Gaps = 3/30 (10%)

Query: 65 CTY--CSRAFKKRSDLTRHIRSHTKEKPFK 92
          C +  C++ F+  S + +H+ +H   +   
Sbjct: 8  CPHKGCTKMFRDNSAMRKHLHTHG-PRVHV 36

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 44.5 bits (106), Expect = 6e-08
 Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 2/30 (6%)

Query: 65 CTYCSRAFKKRSDLTRHIRS--HTKEKPFK 92
          C  CSR +   S+  RH  +      K + 
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYP 42

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 35.2 bits (82), Expect = 2e-04
 Identities = 6/24 (25%), Positives = 14/24 (58%)

Query: 64 SCTYCSRAFKKRSDLTRHIRSHTK 87
           C +C + F ++ ++T H++   K
Sbjct: 42 PCPFCFKEFTRKDNMTAHVKIIHK 65

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 45.1 bits (108), Expect = 6e-08
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C  A +  S LT H+RSHT +    
Sbjct: 67 CQICPYASRNSSQLTVHLRSHTGDSGPS 94

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 44.3 bits (106), Expect = 1e-07
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F ++  L  H+R HT  KP+K
Sbjct: 11 CEVCGKCFSRKDKLKTHMRCHTGVKPYK 38

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 44.3 bits (106), Expect = 1e-07
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C  A    S L +H+R H+ E+PFK
Sbjct: 39 CKTCDYAAADSSSLNKHLRIHSDERPFK 66

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 44.8 bits (107), Expect = 6e-08
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ CS +   ++ L  H R H  ++PFK
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFK 39

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 38.6 bits (91), Expect = 1e-05
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPF 91
          C YCS   K+ S+L++H++    +   
Sbjct: 40 CNYCSFDTKQPSNLSKHMKKFHGDMSG 66

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 45.6 bits (109), Expect = 6e-08
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C R F +   L  H R+HT EKPF 
Sbjct: 69 CKTCQRKFSRSDHLKTHTRTHTGEKPFS 96

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 42.5 bits (101), Expect = 9e-07
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 68 CSRAFKKRSDLTRHIRSHTKEKPFK 92
          C++ + K S L  H R HT EKP++
Sbjct: 14 CNKRYFKLSHLQMHSRKHTGEKPYQ 38

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 12/25 (48%), Positives = 14/25 (56%)

Query: 68 CSRAFKKRSDLTRHIRSHTKEKPFK 92
          C R F +   L RH R HT  KPF+
Sbjct: 44 CERRFSRSDQLKRHQRRHTGVKPFQ 68

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 7e-08
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F + S L  H++ H +EK   
Sbjct: 15 CNECGKNFGRHSHLIEHLKRHFREKSSG 42

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 43.5 bits (103), Expect = 7e-08
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEK 89
          C  C+RAF ++  L RH RSHT EK
Sbjct: 5  CEVCTRAFARQEHLKRHYRSHTNEK 29

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 43.4 bits (102), Expect = 1e-07
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 64 SCTYCSRAFKKRSDLTRHIRSHTKEKPF 91
          +C  C + F+    L RH  SH+ EKP+
Sbjct: 14 ACEICGKIFRDVYHLNRHKLSHSGEKPY 41

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 43.3 bits (103), Expect = 1e-07
 Identities = 9/28 (32%), Positives = 11/28 (39%)

Query: 64 SCTYCSRAFKKRSDLTRHIRSHTKEKPF 91
           C  C   F+    L  H+R HT   P 
Sbjct: 13 PCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-07
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS 95
          C  C   F     L +H+RSH +  P    S
Sbjct: 15 CKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.2 bits (103), Expect = 1e-07
 Identities = 14/28 (50%), Positives = 18/28 (64%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          CT C +AF  RS+L +H + HT EKP  
Sbjct: 15 CTVCGKAFTDRSNLIKHQKIHTGEKPSG 42

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 43.0 bits (102), Expect = 2e-07
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 65 CTYCSRAFKKRSDLTRHIRS-HTKEKPFK 92
          C  C + F +   L  HI+  HT E+P K
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHK 43

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 6/30 (20%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 65 CTY--CSRAFKKRSDLTRHIRSHTKEKPFK 92
          C    C ++F  +  L  H++ H+  + + 
Sbjct: 41 CPEPACGKSFNFKKHLKEHMKLHSDTRDYI 70

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 40.6 bits (96), Expect = 3e-06
 Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 3/31 (9%)

Query: 65 CTY--CSRAFKKRSDLTRHIR-SHTKEKPFK 92
          C +  C R F  R  L  H +  H  +K F 
Sbjct: 10 CDFPGCGRIFSNRQYLNHHKKYQHIHQKSFS 40

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-07
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C ++F  RS L RH   HT EKP  
Sbjct: 15 CDICGKSFCGRSRLNRHSMVHTAEKPSG 42

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-07
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF  RS+L +H + HTK+KP  
Sbjct: 15 CAECGKAFTIRSNLIKHQKIHTKQKPSG 42

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-07
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF   + LT+H R H+ EKP  
Sbjct: 15 CDVCRKAFSHHASLTQHQRVHSGEKPSG 42

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 44.0 bits (105), Expect = 3e-07
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C   F++R +L  H+ SHT E P+K
Sbjct: 69 CSVCQETFRRRMELRLHMVSHTGEMPYK 96

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 42.9 bits (102), Expect = 9e-07
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F  +  L  H R HT EKPF+
Sbjct: 10 CPTCHKKFLSKYYLKVHNRKHTGEKPFE 37

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 38.3 bits (90), Expect = 4e-05
 Identities = 6/31 (19%), Positives = 13/31 (41%), Gaps = 3/31 (9%)

Query: 65 CTYCSRAFKKRSDLTRHIRS---HTKEKPFK 92
          C  C + + ++ +L  H      +  E+ F 
Sbjct: 38 CPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-07
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF+  S+LT H   HT EKP  
Sbjct: 15 CNECGKAFRAHSNLTTHQVIHTGEKPSG 42

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-07
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + +K+R DL  H R HT EK   
Sbjct: 15 CVECGKGYKRRLDLDFHQRVHTGEKLSG 42

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-07
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C +AF + + L  H R HT  +P  
Sbjct: 15 CSECGKAFHRHTHLNEHRRIHTGYRPSG 42

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.8 bits (102), Expect = 3e-07
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C  +F+ + +L  H   HT EKP++
Sbjct: 20 CDRCQASFRYKGNLASHKTVHTGEKPYR 47

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPF 91
          C  C   F + ++L  H R H+ EKP+
Sbjct: 48 CNICGAQFNRPANLKTHTRIHSGEKPY 74

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.1 bits (100), Expect = 3e-07
 Identities = 8/27 (29%), Positives = 11/27 (40%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPF 91
          C  C   F + + L  H+  HT   P 
Sbjct: 14 CETCGARFVQVAHLRAHVLIHTGSGPS 40

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 6/28 (21%), Positives = 13/28 (46%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C + F +R+ + RH  +       +
Sbjct: 50 CSKCGKTFTRRNTMARHADNCAGPDGVE 77

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 37.9 bits (89), Expect = 4e-05
 Identities = 6/32 (18%), Positives = 14/32 (43%), Gaps = 4/32 (12%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKE----KPFK 92
          C++C + F+++  L  H + +         F 
Sbjct: 18 CSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFV 49

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 42.5 bits (101), Expect = 4e-07
 Identities = 14/28 (50%), Positives = 18/28 (64%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF + S L +H R HT EKP+K
Sbjct: 17 CVECGKAFSRSSILVQHQRVHTGEKPYK 44

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 40.5 bits (96), Expect = 2e-06
 Identities = 10/27 (37%), Positives = 12/27 (44%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPF 91
          C  C +AF + S L  H R HT     
Sbjct: 45 CLECGKAFSQNSGLINHQRIHTSGPSS 71

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-07
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF+  S L +H   H+ E+P  
Sbjct: 15 CQVCGKAFRVSSHLVQHHSVHSGERPSG 42

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-07
 Identities = 14/28 (50%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C YC +AF   ++L RH R HT EKP  
Sbjct: 15 CDYCGKAFGLSAELVRHQRIHTGEKPSG 42

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.4 bits (101), Expect = 4e-07
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C ++F   SDL++H R+HT EKP+K
Sbjct: 21 CDECGKSFSHSSDLSKHRRTHTGEKPYK 48

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.3 bits (98), Expect = 1e-06
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF +RS L  H R HT   P  
Sbjct: 49 CDECGKAFIQRSHLIGHHRVHTGSGPSS 76

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 41.8 bits (99), Expect = 5e-07
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          CT+C ++F+ + +L  H R HT EK   
Sbjct: 15 CTHCGKSFRAKGNLVTHQRIHTGEKSGP 42

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-07
 Identities = 9/28 (32%), Positives = 13/28 (46%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + + +R +L  H R H  EK   
Sbjct: 15 CEDCGKGYNRRLNLDMHQRVHMGEKTSG 42

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 42.4 bits (100), Expect = 5e-07
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 65 CTY--CSRAFKKRSDLTRHIRSHTKEKPFK 92
          C++  C + + K S L  H R+HT EKPF 
Sbjct: 20 CSHPGCGKTYFKSSHLKAHTRTHTGEKPFS 49

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 43.2 bits (103), Expect = 5e-07
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF+++  L  H   H+KEKPFK
Sbjct: 48 CDICHKAFRRQDHLRDHRYIHSKEKPFK 75

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 42.8 bits (102), Expect = 6e-07
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C +C R F K  +L  H R+HT E+P+ 
Sbjct: 20 CKFCGRHFTKSYNLLIHERTHTDERPYT 47

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 40.9 bits (97), Expect = 3e-06
 Identities = 6/28 (21%), Positives = 9/28 (32%)

Query: 65  CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
           C  C + F +   L  H   H +     
Sbjct: 76  CQECGKGFCQSRTLAVHKTLHMQTSSPT 103

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 5e-07
 Identities = 12/28 (42%), Positives = 13/28 (46%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F  R DL  H   HT EKP  
Sbjct: 15 CEECGKGFICRRDLYTHHMVHTGEKPSG 42

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-07
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF  RS LT H   HT +KP  
Sbjct: 15 CNQCGKAFSVRSSLTTHQAIHTGKKPSG 42

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-07
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF++   L  H+R HT EKP  
Sbjct: 15 CKECGKAFRQNIHLASHLRIHTGEKPSG 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 41.4 bits (98), Expect = 5e-07
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C +AF  +S L  H ++H +EKP  
Sbjct: 13 CSCCEKAFSSKSYLLVHQQTHAEEKPSG 40

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.3 bits (98), Expect = 6e-07
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF+ +S L  H R+HT E    
Sbjct: 15 CNECGKAFRSKSYLIIHTRTHTGESGPS 42

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 6e-07
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF  RS+L  H + HT EKP  
Sbjct: 15 CAECGKAFTDRSNLFTHQKIHTGEKPSG 42

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 6e-07
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F++ S L RH   HT EKP  
Sbjct: 15 CHECGKVFRRNSHLARHQLIHTGEKPSG 42

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 68 CSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  A+ K   L  H+  HT EKPF 
Sbjct: 20 CGAAYNKNWKLQAHLCKHTGEKPFP 44

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 68  CSRAFKKRSDLTRHIRSHTKEKPFK 92
           C +AFKK + L  H  SHT++ P++
Sbjct: 112 CGKAFKKHNQLKVHQFSHTQQLPYE 136

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 43.4 bits (103), Expect = 1e-06
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 68 CSRAFKKRSDLTRHIRSHTKEKPFK 92
          C + F     LTRH  +HT EK F 
Sbjct: 50 CEKGFTSLHHLTRHSLTHTGEKNFT 74

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 38.0 bits (89), Expect = 1e-04
 Identities = 8/25 (32%), Positives = 10/25 (40%)

Query: 68  CSRAFKKRSDLTRHIRSHTKEKPFK 92
           C + F   S L RH + H      K
Sbjct: 142 CDKRFSLPSRLKRHEKVHAGYPCKK 166

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 4/27 (14%), Positives = 10/27 (37%), Gaps = 2/27 (7%)

Query: 68  CSRAFKKRSDLTRHIRSHTKEK--PFK 92
           C   F  ++++ +H       K   + 
Sbjct: 80  CDLRFTTKANMKKHFNRFHNIKICVYV 106

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 7e-07
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF   + L +H+R HT+E    
Sbjct: 15 CNVCGKAFVLSAHLNQHLRVHTQETLSG 42

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 42.8 bits (102), Expect = 7e-07
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + FK +  L  H++ HT  KP++
Sbjct: 40 CGVCGKKFKMKHHLVGHMKIHTGIKPYE 67

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 39.3 bits (93), Expect = 1e-05
 Identities = 7/25 (28%), Positives = 13/25 (52%)

Query: 68 CSRAFKKRSDLTRHIRSHTKEKPFK 92
          C ++F  +S   RH+  H   +P+ 
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYG 39

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 37.0 bits (87), Expect = 9e-05
 Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 2/28 (7%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C++ F  R    RH+   +  K ++
Sbjct: 68 CNICAKRFMWRDSFHRHV--TSCTKSYE 93

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 7e-07
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F+  S L+RH R HT EKP  
Sbjct: 15 CNECGKVFRHNSYLSRHQRIHTGEKPSG 42

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 7e-07
 Identities = 14/31 (45%), Positives = 16/31 (51%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS 95
          C  C R F  +S L +H R HT EKP    S
Sbjct: 15 CHECGRGFTLKSHLNQHQRIHTGEKPSGPSS 45

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 8e-07
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F + S L RH   HT EKP  
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSG 42

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 42.1 bits (100), Expect = 8e-07
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 64 SCTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
              C + + K S L  H+R+HT EKP+ 
Sbjct: 9  DYAGCGKTYTKSSHLKAHLRTHTGEKPYH 37

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 65 CTY--CSRAFKKRSDLTRHIRSHTKEKPFK 92
          C +  C   F +  +LTRH R HT  +PF+
Sbjct: 38 CDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 8e-07
 Identities = 13/28 (46%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF   S L  H R HT EKP  
Sbjct: 15 CEECGKAFIHDSQLQEHQRIHTGEKPSG 42

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 8e-07
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF     L +H R HT EKP  
Sbjct: 15 CIDCGKAFSDHIGLNQHRRIHTGEKPSG 42

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 8e-07
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +++ +R  LT+H R HT EKP  
Sbjct: 15 CGECGKSYNQRVHLTQHQRVHTGEKPSG 42

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 9e-07
 Identities = 15/28 (53%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AFK +S L  H RSHT EKP  
Sbjct: 15 CIECGKAFKTKSSLICHRRSHTGEKPSG 42

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 9e-07
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          CT C +AF  +S L  H R+H  +K   
Sbjct: 15 CTECGKAFCWKSQLIMHQRTHVDDKHSG 42

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 9e-07
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C +AF  R  L+ H R H+ +KP  
Sbjct: 15 CSVCGKAFSHRQSLSVHQRIHSGKKPSG 42

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.9 bits (97), Expect = 9e-07
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF  +S+L  H R+HT E    
Sbjct: 15 CNECQKAFNTKSNLMVHQRTHTGESGPS 42

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 9e-07
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F + S L RH   HT EKP  
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSG 42

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 9e-07
 Identities = 13/28 (46%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF   S LT H   HT EKP  
Sbjct: 15 CNECGKAFSVYSSLTTHQVIHTGEKPSG 42

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-06
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F +RS L  H+R H++EK   
Sbjct: 15 CNECGKGFGRRSHLAGHLRLHSREKSSG 42

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-06
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C ++F     LT+H  +HT+EKP  
Sbjct: 15 CSECGKSFSGSYRLTQHWITHTREKPSG 42

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-06
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          CT C +AF ++S L+ H + HT EKP  
Sbjct: 15 CTECGKAFTRKSTLSMHQKIHTGEKPSG 42

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-06
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF   S  T+H R HT ++P  
Sbjct: 15 CMECGKAFGDNSSCTQHQRLHTGQRPSG 42

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-06
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF+ RS L  H  +H+ EKP  
Sbjct: 15 CNECGKAFRARSSLAIHQATHSGEKPSG 42

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 41.0 bits (97), Expect = 1e-06
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F +RS L  H + HT EKP  
Sbjct: 15 CVECGKGFSRRSALNVHHKLHTGEKPSG 42

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-06
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C ++F ++S L RH R HT EKP  
Sbjct: 15 CNECGKSFIQKSHLNRHRRIHTGEKPSG 42

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-06
 Identities = 14/28 (50%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF + S L RH R HT EKP  
Sbjct: 15 CNECGKAFSQTSKLARHQRIHTGEKPSG 42

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.4 bits (98), Expect = 1e-06
 Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 1/29 (3%)

Query: 64 SCTYCSRAFKKRSDLTRHIRS-HTKEKPF 91
           C +C     ++SDL  H+R  H+   P 
Sbjct: 47 HCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.0 bits (97), Expect = 2e-06
 Identities = 7/31 (22%), Positives = 9/31 (29%), Gaps = 2/31 (6%)

Query: 64 SCTYCSRAFKKRSDLTRHIRSHTKE--KPFK 92
           C  C   F +   +  HI     E    F 
Sbjct: 17 ECYICHARFTQSGTMKMHILQKHTENVAKFH 47

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 40.6 bits (96), Expect = 1e-06
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPF 91
          C  C ++F+++  LT H R HT   P 
Sbjct: 13 CQECGKSFRQKGSLTLHERIHTGSGPS 39

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 40.6 bits (96), Expect = 1e-06
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C +AF ++  L  H R+H  E    
Sbjct: 13 CSECGKAFNRKDQLISHQRTHAGESGPS 40

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-06
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  CS+AF +++ L +H ++HT EKP  
Sbjct: 15 CKVCSKAFTQKAHLAQHQKTHTGEKPSG 42

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-06
 Identities = 14/28 (50%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF + S L RH R HT EKP  
Sbjct: 15 CNECGKAFSQTSKLARHQRVHTGEKPSG 42

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-06
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF ++  L  H R+H  EKP  
Sbjct: 15 CHECGKAFSRKYQLISHQRTHAGEKPSG 42

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-06
 Identities = 9/28 (32%), Positives = 13/28 (46%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F +   L +H R HT E+   
Sbjct: 15 CKECRKTFIQIGHLNQHKRVHTGERSSG 42

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.5 bits (96), Expect = 1e-06
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C +AF  +S+L  H R+HT EKP  
Sbjct: 15 CSECQKAFNTKSNLIVHQRTHTGEKPSG 42

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.5 bits (96), Expect = 1e-06
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F + S L RH   HT EKP  
Sbjct: 15 CNECGKVFTQNSHLVRHRGIHTGEKPSG 42

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-06
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C ++F+  S LT H R HT EKP  
Sbjct: 15 CDVCHKSFRYGSSLTVHQRIHTGEKPSG 42

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.2 bits (95), Expect = 1e-06
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPF 91
          C  C +AF ++  L  HIR HT   P 
Sbjct: 14 CDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 41.2 bits (97), Expect = 1e-06
 Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 3/33 (9%)

Query: 63 LSCTYCSRAFKKRSDLTRHIRSHTK---EKPFK 92
          L C  C    ++++ L  H R H +      F 
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKHAETVAALRFP 40

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.0 bits (86), Expect = 7e-05
 Identities = 5/29 (17%), Positives = 9/29 (31%)

Query: 64 SCTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
           C +C + F+K   +  H           
Sbjct: 40 PCEFCGKRFEKPDSVAAHRSKSHPALLLA 68

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-06
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF ++++LT+H R HT EKP  
Sbjct: 15 CGECGKAFAQKANLTQHQRIHTGEKPSG 42

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 40.3 bits (95), Expect = 2e-06
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C ++F +R  L  H RS ++  P  
Sbjct: 14 CGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-06
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C +AF ++S L+ H R H  EKP  
Sbjct: 15 CSECGKAFIQKSTLSMHQRIHRGEKPSG 42

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 2e-06
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C ++F  +  L  H R HT+EKP  
Sbjct: 15 CSQCEKSFSGKLRLLVHQRMHTREKPSG 42

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-06
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F + S L RH R HT  KP  
Sbjct: 15 CNECGKVFTQNSHLARHRRVHTGGKPSG 42

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 2e-06
 Identities = 10/28 (35%), Positives = 11/28 (39%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C   F + S L  H   H  EKP  
Sbjct: 15 CRECDMCFSQASSLRLHQNVHVGEKPSG 42

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-06
 Identities = 8/28 (28%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + +  + +L  H + HT E+P  
Sbjct: 15 CEKCGKGYNSKFNLDMHQKVHTGERPSG 42

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 40.2 bits (95), Expect = 2e-06
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C++ F  +S L  H RSHT  KP  
Sbjct: 15 CSQCAKTFSLKSQLIVHQRSHTGVKPSG 42

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-06
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C ++F K+S L  H + HT EKP  
Sbjct: 15 CSICGKSFTKKSQLHVHQQIHTGEKPSG 42

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-06
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C +AF  +S L  H+R+H+ EKP  
Sbjct: 15 CSECGKAFSSKSYLIIHMRTHSGEKPSG 42

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 40.2 bits (95), Expect = 2e-06
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF + + L +H R HT EKP  
Sbjct: 15 CKECGKAFSQTTHLIQHQRVHTGEKPSG 42

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 41.5 bits (98), Expect = 2e-06
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 65 CTY--CSRAFKKRSDLTRHIRSHTKEKPFK 92
          CT+  C   F +  +LTRH R HT  KPF+
Sbjct: 48 CTWEGCDWRFARSDELTRHYRKHTGAKPFQ 77

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 40.7 bits (96), Expect = 4e-06
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 67 YCSRAFKKRSDLTRHIRSHTKEKPFK 92
           C++ + K S L  H+R+HT EKP+K
Sbjct: 22 GCTKVYTKSSHLKAHLRTHTGEKPYK 47

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-06
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C + F  +++L  H + HT E+P  
Sbjct: 15 CSECGKVFTHKTNLIIHQKIHTGERPSG 42

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-06
 Identities = 11/28 (39%), Positives = 13/28 (46%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F + S L  H R HT  KP  
Sbjct: 15 CNECGKVFTQNSHLANHQRIHTGVKPSG 42

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-06
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F + S LT H R HT EKP  
Sbjct: 15 CNECGKVFTQNSHLTNHWRIHTGEKPSG 42

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 40.2 bits (95), Expect = 2e-06
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F + S L++H + HT EKP  
Sbjct: 15 CNECGKVFSRNSQLSQHQKIHTGEKPSG 42

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 39.9 bits (94), Expect = 2e-06
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C ++F+  S L +H R H+ EKP  
Sbjct: 15 CKECGKSFRWASCLLKHQRVHSGEKPSG 42

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.8 bits (94), Expect = 2e-06
 Identities = 6/28 (21%), Positives = 13/28 (46%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F ++  L  H ++H+ +    
Sbjct: 15 CCECGKVFSRKDQLVSHQKTHSGQSGPS 42

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-06
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F ++S L+ H R+HT EKP  
Sbjct: 15 CNECGKTFSQKSILSAHQRTHTGEKPSG 42

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-06
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C ++F  +S L  H + HT E+   
Sbjct: 15 CSDCGKSFTWKSRLRIHQKCHTGERHSG 42

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-06
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C ++F K+S L  H R HT E P  
Sbjct: 15 CSDCGKSFIKKSQLHVHQRIHTGENPSG 42

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-06
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C +AF ++S L  H R HT EKP  
Sbjct: 15 CSECGKAFARKSTLIMHQRIHTGEKPSG 42

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 39.8 bits (94), Expect = 3e-06
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C ++F   S L  H R HT EKP  
Sbjct: 15 CAECGKSFSISSQLATHQRIHTGEKPSG 42

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 39.6 bits (93), Expect = 3e-06
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 64 SCTY--CSRAFKKRSDLTRHIRSHTKEKPFK 92
          +CT+  C   F +  +L+RH RSH+  KP  
Sbjct: 14 ACTWPGCGWRFSRSDELSRHRRSHSGVKPSG 44

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 42.0 bits (100), Expect = 3e-06
 Identities = 15/28 (53%), Positives = 20/28 (71%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C ++F  + DLTRH R+HT EKP+K
Sbjct: 52 CPECGKSFSDKKDLTRHQRTHTGEKPYK 79

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 42.0 bits (100), Expect = 4e-06
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 65  CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
           C  C ++F +R++L  H R+HT EKP+ 
Sbjct: 80  CPECGKSFSQRANLRAHQRTHTGEKPYA 107

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 65  CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
           C  C ++F +  +L  H R+HT EKP+K
Sbjct: 136 CPECGKSFSREDNLHTHQRTHTGEKPYK 163

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 41.3 bits (98), Expect = 7e-06
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C ++F +   L  H R+HT EKP+K
Sbjct: 24 CPECGKSFSRSDHLAEHQRTHTGEKPYK 51

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 40.9 bits (97), Expect = 9e-06
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 65  CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
           C  C ++F + + L  H R+HT EKP+K
Sbjct: 108 CPECGKSFSQLAHLRAHQRTHTGEKPYK 135

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 65  CTYCSRAFKKRSDLTRHIRSHTKEKP 90
           C  C ++F +R  L  H R+HT +K 
Sbjct: 164 CPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 35.5 bits (83), Expect = 7e-04
 Identities = 4/22 (18%), Positives = 6/22 (27%)

Query: 71 AFKKRSDLTRHIRSHTKEKPFK 92
          +    S           EKP+ 
Sbjct: 2  SEFGSSSSVAQAALEPGEKPYA 23

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 3e-06
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F + S L  H R HT EKP  
Sbjct: 15 CEECGKRFTQNSHLHSHQRVHTGEKPSG 42

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-06
 Identities = 11/28 (39%), Positives = 13/28 (46%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C ++F   S L  H R HT E P  
Sbjct: 15 CRECGKSFSFNSQLIVHQRIHTGENPSG 42

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-06
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C ++F +   L +H R H+ EKP  
Sbjct: 15 CKECGKSFSRAPCLLKHERLHSGEKPSG 42

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.5 bits (93), Expect = 4e-06
 Identities = 11/28 (39%), Positives = 13/28 (46%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F   S    H RSH+ EKP  
Sbjct: 15 CEECGKGFYTNSQCYSHQRSHSGEKPSG 42

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-06
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C+ C +AF ++S L  H +SHT E+   
Sbjct: 15 CSDCGKAFTRKSGLHIHQQSHTGERHSG 42

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 4e-06
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS 95
          C+ C + F + S+  +H R HT EKP    S
Sbjct: 15 CSDCGKFFLQASNFIQHRRIHTGEKPSGPSS 45

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-06
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C ++F + + L +H R HT EKP  
Sbjct: 15 CNECGKSFIQSAHLIQHQRIHTGEKPSG 42

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 4e-06
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F + S L  H R HT EKP  
Sbjct: 15 CDVCGKEFSQSSHLQTHQRVHTGEKPSG 42

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-06
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F + S L  H R HT EKP  
Sbjct: 15 CEECGKRFTQNSQLHSHQRVHTGEKPSG 42

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-06
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C + F + S LT H R HT EKP  
Sbjct: 15 CNECKKTFTQSSSLTVHQRIHTGEKPSG 42

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.7 bits (91), Expect = 7e-06
 Identities = 9/28 (32%), Positives = 12/28 (42%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C +AF  +S L  H R+H       
Sbjct: 15 CNECGKAFIWKSLLIVHERTHAGVSGPS 42

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 39.2 bits (92), Expect = 9e-06
 Identities = 14/25 (56%), Positives = 18/25 (72%)

Query: 68 CSRAFKKRSDLTRHIRSHTKEKPFK 92
          C R F +  +LTRHIR HT +KPF+
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQ 51

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.5 bits (88), Expect = 2e-05
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 65 CTYCSRAFKKRSDLTRHIRS-HTKEKPFK 92
          C  C +AF + + L RH R  HT EKP  
Sbjct: 15 CIECGKAFIQNTSLIRHWRYYHTGEKPSG 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.0 bits (84), Expect = 9e-05
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKP 90
          C  C +AF +   LTRH + HT++  
Sbjct: 15 CNECGKAFTRIFHLTRHQKIHTRKSG 40

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.6 bits (83), Expect = 1e-04
 Identities = 10/27 (37%), Positives = 11/27 (40%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPF 91
          C  C + F   S L  H R H  EK  
Sbjct: 15 CDECGKNFCYISALRIHQRVHMGEKCS 41

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 34.6 bits (80), Expect = 3e-04
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)

Query: 65 CTY--CSRAFKKRSDLTRHIRSHTKEK 89
          C    C + + K S L  H+R HT E+
Sbjct: 11 CHIQGCGKVYGKTSHLRAHLRWHTGER 37

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 36

 Score = 34.4 bits (78), Expect = 3e-04
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 63 LSCTYCSRAFKKRSDLTRHIRSHTKEK 89
           +C YC++ FK +  L  H+R HT EK
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNEK 36

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 34.7 bits (79), Expect = 4e-04
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
          C  C    KK S L +HIR+HT  +P+ 
Sbjct: 4  CEECGIRXKKPSMLKKHIRTHTDVRPYH 31

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 34.2 bits (79), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 12/27 (44%)

Query: 64 SCTYCSRAFKKRSDLTRHIRSHTKEKP 90
          SC  C   F   + L +H + HT +  
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTVKSG 38

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 34.1 bits (78), Expect = 5e-04
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEKP 90
          C+ C R F +R+ L +H R+H ++  
Sbjct: 15 CSKCDRVFTQRNYLVQHERTHARKSG 40

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 33.0 bits (76), Expect = 8e-04
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 64 SCTY--CSRAFKKRSDLTRHIRSHTKEK 89
           CT+  C + F +  +L RH R+HT EK
Sbjct: 4  MCTWSYCGKRFTRSDELQRHKRTHTGEK 31

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	96
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.62
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.61
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.61
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.61
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.61
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.61
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.6
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.6
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.6
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.6
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.6
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.6
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.6
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.6
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.6
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.6
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.6
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.6
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.6
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.6
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.6
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.6
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.6
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.6
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.6
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.6
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.59
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.59
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.59
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.59
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.59
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.59
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.59
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.59
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.59
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.59
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.59
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.58
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.58
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.58
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.58
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.57
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.57
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.57
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.56
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.54
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.54
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.53
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.53
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.52
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.52
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.52
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.51
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.51
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.51
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.51
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.51
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.51
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.51
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.51
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.51
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.51
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.51
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.51
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.5
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.5
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.5
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.5
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.5
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.5
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.5
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.5
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.5
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.49
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.49
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.49
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.49
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.49
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.49
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.48
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.48
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.48
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.48
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.48
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.48
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.48
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.47
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.47
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.47
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.46
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.46
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.46
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.46
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.43
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.43
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.4
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.38
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.34
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.33
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.33
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.32
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.29
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.28
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.28
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.28
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.28
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.28
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.25
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.25
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.25
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.24
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.24
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.23
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.23
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.22
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.22
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.21
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.21
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.21
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.2
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.2
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.18
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.18
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.17
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.16
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.15
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.13
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.12
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	99.12
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.12
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.11
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.09
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.08
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.08
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.07
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.07
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.07
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.07
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.04
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	99.03
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.03
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.03
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.0
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.0
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.0
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.99
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	98.98
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	98.98
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	98.98
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.96
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.96
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.95
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	98.95
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.94
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	98.93
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.93
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	98.93
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.93
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.92
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.92
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.89
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.89
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.87
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.86
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	98.86
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.85
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.85
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	98.84
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.84
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.84
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.83
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.83
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.83
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.83
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	98.81
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.81
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.81
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.8
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.8
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	98.8
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.29
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.8
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	98.79
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.79
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.79
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	98.78
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.22
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.73
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.73
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.73
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	98.73
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.72
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.71
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.71
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.68
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.66
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	98.65
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.64
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.63
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.6
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	98.57
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.55
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.53
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.93
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.48
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.47
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.47
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.46
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.46
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.41
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.3
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.3
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.26
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.25
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.24
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.23
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.0
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	97.67
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	97.45
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	97.44
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	97.42
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.42
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.41
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	97.4
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	97.4
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.36
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.36
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.35
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.34
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.34
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.33
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.33
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.31
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.31
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.31
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.3
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.3
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.3
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	97.3
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.3
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.3
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.29
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.29
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.28
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.28
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.28
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.28
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.27
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.27
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.27
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.27
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.27
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.26
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.26
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.26
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.26
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.26
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.25
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.25
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.25
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.25
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.24
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.24
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.24
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.22
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.22
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	97.22
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.21
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.21
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.21
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.21
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.21
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.21
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	97.21
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.2
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.2
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.2
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	97.2
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.2
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.2
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.2
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.2
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.2
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.2
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	97.19
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.19
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.19
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.19
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.18
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	97.18
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.17
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.17
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.17
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.17
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.16
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.15
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.15
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.15
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.15
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	97.14
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.14
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.14
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.12
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.12
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.11
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.1
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	97.08
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.99
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	96.92
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	96.91
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.78
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	96.66
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.59
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.57
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	96.55
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	96.52
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	96.52
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.49
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	96.45
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.41
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.33
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.3
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.24
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	96.13
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	96.11
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	96.06
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	95.8
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	95.74
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	95.68
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	95.63
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.57
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	94.8
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	94.18
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	93.75
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	89.41
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	88.87
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	88.44
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	88.08
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	87.41
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	82.85
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	82.83
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	81.17

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.62  E-value=5.5e-16  Score=75.58  Aligned_cols=45  Identities=31%  Similarity=0.444  Sum_probs=42.4

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|++.++|.|..|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356789999999999999999999999999999999999999998

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=4.7e-16  Score=75.84  Aligned_cols=45  Identities=33%  Similarity=0.471  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.61  E-value=5.1e-16  Score=75.59  Aligned_cols=45  Identities=31%  Similarity=0.392  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|++.++|.|..|++.|...+.|..|+++|+|++||+|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=5.6e-16  Score=75.50  Aligned_cols=45  Identities=33%  Similarity=0.448  Sum_probs=42.2

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|++.++|.|..|++.|...+.|..|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=5.7e-16  Score=75.42  Aligned_cols=45  Identities=29%  Similarity=0.394  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|+|++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=5.7e-16  Score=75.48  Aligned_cols=45  Identities=33%  Similarity=0.459  Sum_probs=42.4

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            356789999999999999999999999999999999999999998

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=6.3e-16  Score=75.32  Aligned_cols=45  Identities=29%  Similarity=0.444  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|++.++|.|..|++.|...+.|..|+++|+|++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=8.7e-16  Score=74.75  Aligned_cols=45  Identities=29%  Similarity=0.338  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|.++++|.|..|++.|...+.|..|+++|+|++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=5.7e-16  Score=75.41  Aligned_cols=45  Identities=29%  Similarity=0.390  Sum_probs=42.2

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|++.++|.|..|++.|...+.|..|+++|+|++||+|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.60  E-value=5.4e-16  Score=75.63  Aligned_cols=45  Identities=31%  Similarity=0.443  Sum_probs=42.2

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|+|++||+|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=6.4e-16  Score=75.29  Aligned_cols=45  Identities=29%  Similarity=0.438  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|.+.++|.|..|++.|...+.|..|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=5.3e-16  Score=75.60  Aligned_cols=45  Identities=31%  Similarity=0.417  Sum_probs=42.2

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=6.4e-16  Score=75.29  Aligned_cols=45  Identities=27%  Similarity=0.413  Sum_probs=42.2

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|.+.++|.|..|++.|.....|..|+++|+|++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=6.4e-16  Score=75.30  Aligned_cols=45  Identities=33%  Similarity=0.465  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=5.8e-16  Score=75.46  Aligned_cols=45  Identities=31%  Similarity=0.362  Sum_probs=42.2

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.60  E-value=7.2e-16  Score=75.16  Aligned_cols=44  Identities=27%  Similarity=0.382  Sum_probs=41.9

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +.+.|+++++|.|..|++.|.....|..|+++|++++||+|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56788999999999999999999999999999999999999998

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=5.5e-16  Score=75.52  Aligned_cols=44  Identities=30%  Similarity=0.428  Sum_probs=41.8

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +.+.|+++++|.|..|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56788999999999999999999999999999999999999998

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=6.3e-16  Score=75.37  Aligned_cols=45  Identities=36%  Similarity=0.456  Sum_probs=42.4

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|++.++|.|..|++.|...+.|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=6.4e-16  Score=75.30  Aligned_cols=45  Identities=31%  Similarity=0.448  Sum_probs=42.2

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999988

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=6.2e-16  Score=75.35  Aligned_cols=45  Identities=31%  Similarity=0.433  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=6.2e-16  Score=74.68  Aligned_cols=44  Identities=27%  Similarity=0.429  Sum_probs=41.3

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +.+.|+++++|.|..|++.|...+.|..|+++|+|++||.|.+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999988

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=6.6e-16  Score=75.24  Aligned_cols=45  Identities=31%  Similarity=0.470  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.60  E-value=6.7e-16  Score=75.24  Aligned_cols=45  Identities=29%  Similarity=0.440  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|+|++||+|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=8.8e-16  Score=74.73  Aligned_cols=45  Identities=36%  Similarity=0.513  Sum_probs=42.4

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|++.++|.|..|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=5.9e-16  Score=75.43  Aligned_cols=45  Identities=31%  Similarity=0.424  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|.++++|.|..|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=5.6e-16  Score=75.52  Aligned_cols=45  Identities=36%  Similarity=0.491  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=7.8e-16  Score=74.99  Aligned_cols=45  Identities=31%  Similarity=0.450  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|++++||.|.+|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=6e-16  Score=75.45  Aligned_cols=45  Identities=24%  Similarity=0.352  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=5.7e-16  Score=75.47  Aligned_cols=45  Identities=33%  Similarity=0.336  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|+|++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=8e-16  Score=74.94  Aligned_cols=44  Identities=27%  Similarity=0.375  Sum_probs=41.9

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +.+.|+++++|.|..|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56788999999999999999999999999999999999999998

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=6.3e-16  Score=75.26  Aligned_cols=45  Identities=27%  Similarity=0.373  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|+|++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=8.9e-16  Score=74.78  Aligned_cols=45  Identities=31%  Similarity=0.437  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|+|++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=7.7e-16  Score=74.95  Aligned_cols=45  Identities=29%  Similarity=0.241  Sum_probs=42.2

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|+|++||+|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=6.1e-16  Score=75.44  Aligned_cols=45  Identities=24%  Similarity=0.396  Sum_probs=42.4

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|.++++|.|..|++.|...+.|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            456789999999999999999999999999999999999999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.59  E-value=8.3e-16  Score=74.82  Aligned_cols=45  Identities=29%  Similarity=0.392  Sum_probs=42.4

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            356789999999999999999999999999999999999999998

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=7e-16  Score=75.15  Aligned_cols=45  Identities=33%  Similarity=0.447  Sum_probs=42.2

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|+|++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.59  E-value=6.8e-16  Score=75.19  Aligned_cols=45  Identities=27%  Similarity=0.306  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|.++++|.|..|++.|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            356788999999999999999999999999999999999999998

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=6.2e-16  Score=75.41  Aligned_cols=45  Identities=31%  Similarity=0.463  Sum_probs=42.2

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=9.5e-16  Score=74.68  Aligned_cols=45  Identities=22%  Similarity=0.186  Sum_probs=42.2

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|+|++||+|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=7.3e-16  Score=75.09  Aligned_cols=45  Identities=22%  Similarity=0.377  Sum_probs=42.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=9.6e-16  Score=74.60  Aligned_cols=45  Identities=24%  Similarity=0.326  Sum_probs=42.2

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|++.++|.|..|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=7.9e-16  Score=74.91  Aligned_cols=45  Identities=29%  Similarity=0.344  Sum_probs=42.2

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|++.++|.|..|++.|.....|..|+++|+|++||+|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=6.7e-16  Score=75.33  Aligned_cols=44  Identities=27%  Similarity=0.379  Sum_probs=41.8

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +.+.|+++++|.|..|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56788999999999999999999999999999999999999998

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=9.6e-16  Score=74.71  Aligned_cols=44  Identities=30%  Similarity=0.377  Sum_probs=41.7

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +.+.|.+.++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            46788999999999999999999999999999999999999998

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.2e-15  Score=74.36  Aligned_cols=45  Identities=33%  Similarity=0.445  Sum_probs=42.0

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|++.++|.|..|++.|.....|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999986

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=8.2e-16  Score=74.84  Aligned_cols=45  Identities=36%  Similarity=0.477  Sum_probs=42.2

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999998

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.57  E-value=6e-16  Score=80.12  Aligned_cols=37  Identities=24%  Similarity=0.608  Sum_probs=34.8

Q ss_pred             CCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          60 NPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        60 ~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ++||.|.+|++.|...+.|..|+++|+|++||.|.+|
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C   38 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPEC   38 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTT
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCC
Confidence            6889999999999999999999999999999999988

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=2e-15  Score=73.54  Aligned_cols=45  Identities=31%  Similarity=0.482  Sum_probs=42.0

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356788999999999999999999999999999999999999986

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.8e-15  Score=73.64  Aligned_cols=43  Identities=33%  Similarity=0.440  Sum_probs=41.0

Q ss_pred             CCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          54 NRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        54 ~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.|+++++|.|..|++.|.....|..|+++|++++||+|.+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            5678899999999999999999999999999999999999998

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=1.9e-15  Score=73.79  Aligned_cols=45  Identities=33%  Similarity=0.442  Sum_probs=42.2

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHh-hhCCCCCcccccC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIR-SHTKEKPFKVRSL   96 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~-~htgekp~~C~~C   96 (96)
                      .+.+.|+++++|.|..|++.|.....|..|++ +|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            35678899999999999999999999999999 9999999999998

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=1.5e-15  Score=73.98  Aligned_cols=43  Identities=28%  Similarity=0.424  Sum_probs=40.9

Q ss_pred             CCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          54 NRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        54 ~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.|.++++|.|..|++.|.....|..|+++|++++||+|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5678899999999999999999999999999999999999998

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=5.6e-15  Score=71.93  Aligned_cols=44  Identities=39%  Similarity=0.510  Sum_probs=41.0

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|.++++|.|..|++.|.....|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            35678999999999999999999999999999999999999975

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.53  E-value=7.3e-15  Score=71.52  Aligned_cols=44  Identities=32%  Similarity=0.467  Sum_probs=41.0

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|.++++|.|..|++.|.....|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=7.8e-15  Score=71.34  Aligned_cols=44  Identities=32%  Similarity=0.543  Sum_probs=40.9

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|++.++|.|..|++.|.....|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=7.1e-15  Score=71.55  Aligned_cols=44  Identities=34%  Similarity=0.489  Sum_probs=40.9

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=9.2e-15  Score=71.02  Aligned_cols=44  Identities=32%  Similarity=0.487  Sum_probs=40.8

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|++.++|.|..|++.|.....|..|+++|+|++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1e-14  Score=70.92  Aligned_cols=44  Identities=32%  Similarity=0.462  Sum_probs=40.9

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|++++||+|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=8.9e-15  Score=71.08  Aligned_cols=44  Identities=34%  Similarity=0.538  Sum_probs=40.8

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|++.++|.|..|++.|.....|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=8.9e-15  Score=71.14  Aligned_cols=44  Identities=25%  Similarity=0.451  Sum_probs=40.9

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|.+.++|.|..|++.|.....|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=8.7e-15  Score=71.18  Aligned_cols=44  Identities=32%  Similarity=0.456  Sum_probs=40.8

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1e-14  Score=70.82  Aligned_cols=44  Identities=34%  Similarity=0.497  Sum_probs=40.7

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|.+.++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            35678899999999999999999999999999999999999975

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.51  E-value=1.1e-14  Score=71.51  Aligned_cols=42  Identities=26%  Similarity=0.521  Sum_probs=39.3

Q ss_pred             CCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ..+.++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS   46 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCC
Confidence            456778899999999999999999999999999999999998

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.2e-14  Score=70.67  Aligned_cols=44  Identities=32%  Similarity=0.477  Sum_probs=40.8

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|.+.++|.|..|++.|.....|..|+++|+|++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.51  E-value=1.2e-14  Score=69.27  Aligned_cols=41  Identities=22%  Similarity=0.447  Sum_probs=38.6

Q ss_pred             CCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccc
Q psy9655          54 NRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVR   94 (96)
Q Consensus        54 ~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~   94 (96)
                      .+.|+++++|.|..|++.|...+.|..|+++|+|++||.|.
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            46788999999999999999999999999999999999995

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=8.1e-15  Score=71.22  Aligned_cols=44  Identities=34%  Similarity=0.465  Sum_probs=40.8

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|.+.++|.|..|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999985

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=9.6e-15  Score=71.07  Aligned_cols=44  Identities=32%  Similarity=0.454  Sum_probs=40.8

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|.+.++|.|..|++.|.....|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.2e-14  Score=71.17  Aligned_cols=44  Identities=30%  Similarity=0.441  Sum_probs=41.1

Q ss_pred             CCCCCCCCCceecc--cchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          53 YNRPVPPNPSLSCT--YCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        53 ~~~~~~~~~~~~C~--~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +.+.|+++++|.|.  .|++.|.....|..|+++|++++||+|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678899999998  899999999999999999999999999998

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.51  E-value=1e-14  Score=70.67  Aligned_cols=42  Identities=24%  Similarity=0.377  Sum_probs=39.9

Q ss_pred             CCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ..|+++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~c   44 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSS   44 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCC
Confidence            467889999999999999999999999999999999999988

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.1e-14  Score=70.81  Aligned_cols=44  Identities=34%  Similarity=0.466  Sum_probs=40.8

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|.+.++|.|..|++.|.....|..|+++|++++||.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=1.6e-14  Score=70.25  Aligned_cols=44  Identities=25%  Similarity=0.351  Sum_probs=40.8

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCC-CCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTK-EKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htg-ekp~~C~~   95 (96)
                      .+.+.|.++++|.|..|++.|.....|..|+++|++ ++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356788999999999999999999999999999999 99999975

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.2e-14  Score=70.55  Aligned_cols=44  Identities=34%  Similarity=0.520  Sum_probs=40.8

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|++.++|.|..|++.|.....|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.1e-14  Score=70.72  Aligned_cols=44  Identities=32%  Similarity=0.465  Sum_probs=40.8

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|++.++|.|..|++.|.....|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.6e-14  Score=70.22  Aligned_cols=43  Identities=30%  Similarity=0.500  Sum_probs=40.1

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      +.+.|++.++|.|..|++.|.....|..|+++|++++||+|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4667899999999999999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.1e-14  Score=70.82  Aligned_cols=44  Identities=36%  Similarity=0.524  Sum_probs=40.8

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|++.++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=8.8e-15  Score=71.27  Aligned_cols=43  Identities=26%  Similarity=0.444  Sum_probs=40.4

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      +.+.|++.++|.|..|++.|.....|..|+++|++++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            4678899999999999999999999999999999999999975

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.2e-14  Score=70.71  Aligned_cols=43  Identities=23%  Similarity=0.368  Sum_probs=40.4

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      +.+.|+++++|.|..|++.|.....|..|+++|++++||+|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5678899999999999999999999999999999999999975

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.2e-14  Score=70.61  Aligned_cols=44  Identities=34%  Similarity=0.472  Sum_probs=40.8

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|++.++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=9.9e-15  Score=70.96  Aligned_cols=43  Identities=30%  Similarity=0.454  Sum_probs=40.4

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      +.+.|++.++|.|..|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            5678899999999999999999999999999999999999975

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=2e-14  Score=69.23  Aligned_cols=43  Identities=19%  Similarity=0.336  Sum_probs=40.1

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVR   94 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~   94 (96)
                      .+.+.|.++++|.|..|++.|...+.|..|+++|+|++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            3567889999999999999999999999999999999999995

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.49  E-value=1.7e-14  Score=69.35  Aligned_cols=42  Identities=19%  Similarity=0.316  Sum_probs=38.9

Q ss_pred             CCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          54 NRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        54 ~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.|+++++|.|..|++.|.....|..|+++|++++||+|++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            2 SSGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            356888999999999999999999999999999999999975

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.8e-14  Score=70.05  Aligned_cols=44  Identities=30%  Similarity=0.437  Sum_probs=40.7

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2e-14  Score=69.90  Aligned_cols=44  Identities=30%  Similarity=0.432  Sum_probs=40.8

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2e-14  Score=69.13  Aligned_cols=42  Identities=26%  Similarity=0.409  Sum_probs=39.6

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccc
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVR   94 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~   94 (96)
                      +.+.|++.++|.|..|++.|.....|..|+++|+|++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            567889999999999999999999999999999999999995

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=3.1e-14  Score=68.54  Aligned_cols=43  Identities=23%  Similarity=0.437  Sum_probs=39.9

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVR   94 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~   94 (96)
                      .+.+.|.++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            3567889999999999999999999999999999999999995

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.6e-14  Score=69.46  Aligned_cols=43  Identities=28%  Similarity=0.368  Sum_probs=39.9

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVR   94 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~   94 (96)
                      .+.+.|++.++|.|..|++.|.....|..|+++|+|++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3567889999999999999999999999999999999999995

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.2e-14  Score=69.48  Aligned_cols=43  Identities=26%  Similarity=0.447  Sum_probs=39.6

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      ..+.|+++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            3567889999999999999999999999999999999999974

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.48  E-value=2.7e-14  Score=68.00  Aligned_cols=41  Identities=22%  Similarity=0.392  Sum_probs=38.7

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccc
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV   93 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C   93 (96)
                      +.+.|+++++|.|..|++.|...+.|..|+++|++++||+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            45678899999999999999999999999999999999998

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=2.2e-14  Score=69.79  Aligned_cols=42  Identities=29%  Similarity=0.423  Sum_probs=39.4

Q ss_pred             CCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          54 NRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        54 ~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.|.++++|.|..|++.|.....|..|+++|++++||+|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            567889999999999999999999999999999999999975

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.3e-14  Score=68.23  Aligned_cols=41  Identities=20%  Similarity=0.343  Sum_probs=38.5

Q ss_pred             CCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccc
Q psy9655          54 NRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVR   94 (96)
Q Consensus        54 ~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~   94 (96)
                      .+.|.++++|.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            46788999999999999999999999999999999999994

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.5e-14  Score=68.98  Aligned_cols=41  Identities=20%  Similarity=0.310  Sum_probs=38.8

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccc
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV   93 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C   93 (96)
                      +.+.|+++++|.|..|++.|.....|..|+++|+|++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            46688999999999999999999999999999999999998

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=3.2e-14  Score=68.51  Aligned_cols=43  Identities=28%  Similarity=0.413  Sum_probs=40.0

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVR   94 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~   94 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3567889999999999999999999999999999999999994

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.9e-14  Score=69.23  Aligned_cols=43  Identities=16%  Similarity=0.363  Sum_probs=40.1

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVR   94 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~   94 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3567889999999999999999999999999999999999995

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.8e-14  Score=68.66  Aligned_cols=41  Identities=27%  Similarity=0.464  Sum_probs=38.8

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccc
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV   93 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C   93 (96)
                      +.+.|+++++|.|..|++.|...+.|..|+++|+|++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            46788999999999999999999999999999999999998

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=2.5e-14  Score=68.91  Aligned_cols=42  Identities=19%  Similarity=0.275  Sum_probs=39.3

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccc
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVR   94 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~   94 (96)
                      +.+.|.++++|.|..|++.|.....|..|+++|++++||+|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            466788999999999999999999999999999999999995

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=2.4e-14  Score=68.33  Aligned_cols=41  Identities=22%  Similarity=0.400  Sum_probs=38.7

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccc
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV   93 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C   93 (96)
                      +.+.|+++++|.|..|++.|...+.|..|+++|+|++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45678899999999999999999999999999999999998

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.1e-14  Score=69.13  Aligned_cols=44  Identities=34%  Similarity=0.462  Sum_probs=40.7

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|++.++|.|..|++.|.....|..|+++|++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=3.6e-14  Score=67.33  Aligned_cols=40  Identities=25%  Similarity=0.449  Sum_probs=37.6

Q ss_pred             CCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccc
Q psy9655          54 NRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV   93 (96)
Q Consensus        54 ~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C   93 (96)
                      .+.|+++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CSSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3578889999999999999999999999999999999998

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.5e-14  Score=70.33  Aligned_cols=44  Identities=30%  Similarity=0.515  Sum_probs=40.8

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|.++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999975

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.3e-14  Score=69.07  Aligned_cols=44  Identities=25%  Similarity=0.417  Sum_probs=40.5

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+.+.|+++++|.|..|++.|.....|..|+++|++++||+|.-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCSC
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999963

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.2e-13  Score=66.60  Aligned_cols=43  Identities=23%  Similarity=0.259  Sum_probs=39.8

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccc
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVR   94 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~   94 (96)
                      .+.+.|+++++|.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            3567899999999999999999999999999999999999983

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.43  E-value=2e-13  Score=75.13  Aligned_cols=43  Identities=16%  Similarity=0.306  Sum_probs=39.3

Q ss_pred             CCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          54 NRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        54 ~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ...+.+.++|.|.+|++.|.....|..|+++|++++||+|.+|
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C   62 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYC   62 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTS
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCC
Confidence            4456677889999999999999999999999999999999998

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.40  E-value=2e-13  Score=68.59  Aligned_cols=42  Identities=26%  Similarity=0.548  Sum_probs=39.0

Q ss_pred             CCCCCCCceecccchhhccCCchHHHHHh-hhCCCCCcccccC
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRHIR-SHTKEKPFKVRSL   96 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h~~-~htgekp~~C~~C   96 (96)
                      ..+.++++|.|..|++.|.....|..|++ +|++++||+|.+|
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C   47 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW   47 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSS
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCC
Confidence            45678899999999999999999999997 9999999999988

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=3.5e-13  Score=71.23  Aligned_cols=44  Identities=32%  Similarity=0.508  Sum_probs=41.2

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ..+.|.++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C   48 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLEC   48 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCC
Confidence            45678899999999999999999999999999999999999988

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=7e-13  Score=69.63  Aligned_cols=41  Identities=24%  Similarity=0.443  Sum_probs=36.2

Q ss_pred             CCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          56 PVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        56 ~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   43 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYC   43 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCC
Confidence            46777889999999999999999999999999999999887

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=2.9e-13  Score=72.34  Aligned_cols=61  Identities=25%  Similarity=0.270  Sum_probs=50.0

Q ss_pred             hcccCCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccc
Q psy9655          33 NRENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV   93 (96)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C   93 (96)
                      ....+......+.....+..+.+.|.+.++|.|..|++.|.....|..|+++|+|++||+|
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3444555666677777777788888888899999999999999999999999999999987

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.33  E-value=6.6e-13  Score=62.23  Aligned_cols=38  Identities=24%  Similarity=0.550  Sum_probs=34.7

Q ss_pred             CCCCCceecccchhhccCCchHHHHHhhhCCCCCcccc
Q psy9655          57 VPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVR   94 (96)
Q Consensus        57 ~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~   94 (96)
                      |+++++|.|..|++.|...+.|..|+++|+|++||.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            45778999999999999999999999999999999874

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.32  E-value=5.8e-13  Score=66.82  Aligned_cols=49  Identities=16%  Similarity=0.257  Sum_probs=42.5

Q ss_pred             CCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcc
Q psy9655          44 EPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFK   92 (96)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~   92 (96)
                      +........+.+.|+++++|.|..|++.|...+.|..|+++|+|++||.
T Consensus         6 ~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            6 AKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            3444455667778899999999999999999999999999999999984

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.29  E-value=6.2e-13  Score=67.04  Aligned_cols=38  Identities=37%  Similarity=0.717  Sum_probs=33.2

Q ss_pred             CCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          59 PNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        59 ~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   38 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFC   38 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSS
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCC
Confidence            35689999999999999999999999999999999987

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=1.4e-12  Score=68.86  Aligned_cols=39  Identities=23%  Similarity=0.383  Sum_probs=35.4

Q ss_pred             CCCCCCceeccc--chhhccCCchHHHHH-hhhCCCCCcccc
Q psy9655          56 PVPPNPSLSCTY--CSRAFKKRSDLTRHI-RSHTKEKPFKVR   94 (96)
Q Consensus        56 ~~~~~~~~~C~~--C~k~f~~~~~l~~h~-~~htgekp~~C~   94 (96)
                      ..++++||.|.+  |+++|.+.++|..|+ ++|+|+|||-|.
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            457889999976  999999999999997 789999999985

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.28  E-value=5.8e-13  Score=78.64  Aligned_cols=65  Identities=15%  Similarity=0.052  Sum_probs=46.2

Q ss_pred             hhcccCCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          32 ENRENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +....+......+.....+..+.+.|+++++|.|..|++.|.....|..|+++|+|++||.|++|
T Consensus        20 ek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   84 (133)
T 2lt7_A           20 RVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLAC   84 (133)
T ss_dssp             EEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSS
T ss_pred             CcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCC
Confidence            33344555666666666666677777777777777777777777777777777777777777776

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=3.1e-12  Score=68.29  Aligned_cols=43  Identities=33%  Similarity=0.628  Sum_probs=39.5

Q ss_pred             CCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          54 NRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        54 ~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ...+.++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus        10 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   52 (77)
T 2cot_A           10 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDEC   52 (77)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSS
T ss_pred             cCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCC
Confidence            4456678899999999999999999999999999999999988

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=3.1e-12  Score=68.26  Aligned_cols=47  Identities=21%  Similarity=0.376  Sum_probs=42.4

Q ss_pred             CCcCCCCCCCCCceecccchhhccCCchHHHHHh-hhCCC-CCcccccC
Q psy9655          50 TVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIR-SHTKE-KPFKVRSL   96 (96)
Q Consensus        50 ~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~-~htge-kp~~C~~C   96 (96)
                      ...+.+.|+++++|.|..|++.|.....|..|++ .|+++ +||+|.+|
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C   51 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHC   51 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSS
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCC
Confidence            3457889999999999999999999999999997 78875 99999988

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.28  E-value=5.2e-14  Score=83.18  Aligned_cols=43  Identities=26%  Similarity=0.386  Sum_probs=27.8

Q ss_pred             CCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          54 NRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        54 ~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ...+.|+++|.|.+|++.|...+.|..|+++|+|++||+|.+|
T Consensus        14 ~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   56 (133)
T 2lt7_A           14 ELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYC   56 (133)
T ss_dssp             EEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSS
T ss_pred             eeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCcc
Confidence            3445566666666666666666666666666666666666665

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.25  E-value=3.2e-12  Score=67.75  Aligned_cols=39  Identities=26%  Similarity=0.598  Sum_probs=22.2

Q ss_pred             CCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          58 PPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        58 ~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+.++|.|..|++.|.....|..|+++|++++||+|.+|
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C   51 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNIC   51 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTT
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCC
Confidence            344455555555555555555555555555555555554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=5.5e-13  Score=74.60  Aligned_cols=49  Identities=14%  Similarity=0.323  Sum_probs=37.2

Q ss_pred             CCCCcCCCCCCCCCceecccchhhcc-CCchHHHHHhhhCC-CCCcccccC
Q psy9655          48 DRTVSYNRPVPPNPSLSCTYCSRAFK-KRSDLTRHIRSHTK-EKPFKVRSL   96 (96)
Q Consensus        48 ~~~~~~~~~~~~~~~~~C~~C~k~f~-~~~~l~~h~~~htg-ekp~~C~~C   96 (96)
                      .....+.+.|.+.++|.|..|++.|. ....|..|+++|++ ++||.|.+|
T Consensus        10 ~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C   60 (98)
T 2gqj_A           10 GPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHC   60 (98)
T ss_dssp             CSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSS
T ss_pred             CcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCC
Confidence            33445566677777888888888888 88888888888887 888888777

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.8e-12  Score=69.34  Aligned_cols=41  Identities=20%  Similarity=0.399  Sum_probs=37.8

Q ss_pred             CCCCCCceecccchhhccCCchHHHHHhhhCC---CCCcccccC
Q psy9655          56 PVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTK---EKPFKVRSL   96 (96)
Q Consensus        56 ~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htg---ekp~~C~~C   96 (96)
                      .|+++++|.|..|++.|.....|..|+++|++   ++||.|.+|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C   44 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFC   44 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTT
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCC
Confidence            36788999999999999999999999999996   899999988

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=1.3e-12  Score=67.73  Aligned_cols=42  Identities=21%  Similarity=0.377  Sum_probs=38.7

Q ss_pred             CCCCCCCceecccchhhccCCchHHHHHhh-h-CCCCCcccccC
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRHIRS-H-TKEKPFKVRSL   96 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~-h-tgekp~~C~~C   96 (96)
                      ..|+++++|.|..|++.|.....|..|+++ | ++++||.|+.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C   46 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFC   46 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTT
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCC
Confidence            467788999999999999999999999998 8 69999999988

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.24  E-value=2e-12  Score=66.76  Aligned_cols=43  Identities=16%  Similarity=0.233  Sum_probs=38.6

Q ss_pred             CcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          51 VSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        51 ~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ..+.+.|.++++|.|..|++.|.....|.   ++|+|++||.|.+|
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C   45 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFC   45 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSS
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCC
Confidence            45677899999999999999999888876   78999999999988

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=4.2e-13  Score=76.09  Aligned_cols=61  Identities=20%  Similarity=0.258  Sum_probs=47.9

Q ss_pred             cCCCCCCCCCCCCCCCcCCC-CC---CCCCceecccchhhccCCchHHHH-HhhhCCCCCcccccC
Q psy9655          36 NGQNQIVSEPPTDRTVSYNR-PV---PPNPSLSCTYCSRAFKKRSDLTRH-IRSHTKEKPFKVRSL   96 (96)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~C~~C~k~f~~~~~l~~h-~~~htgekp~~C~~C   96 (96)
                      .+......+.....+..+.+ .|   .++++|.|..|++.|...+.|..| +++|+|++||.|.++
T Consensus        20 ~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           20 ECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             ECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             CCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            34455556666666666665 47   567899999999999999999999 899999999999753

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=3.1e-13  Score=72.35  Aligned_cols=57  Identities=14%  Similarity=0.214  Sum_probs=47.5

Q ss_pred             CCCCCCCCCCCCcCCC-CCCCCCceeccc--chhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          40 QIVSEPPTDRTVSYNR-PVPPNPSLSCTY--CSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        40 ~~~~~~~~~~~~~~~~-~~~~~~~~~C~~--C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ....+.....+..|.+ .|.+.++|.|..  |++.|.....|..|+++|++++||.|.+|
T Consensus        15 C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   74 (79)
T 2dlk_A           15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS   74 (79)
T ss_dssp             TCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSS
T ss_pred             CcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCC
Confidence            3344444555556666 688889999999  99999999999999999999999999988

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.22  E-value=1.6e-13  Score=70.91  Aligned_cols=54  Identities=17%  Similarity=0.246  Sum_probs=46.1

Q ss_pred             cCCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          36 NGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      .+......+.....+..+.++|+++++|.|..|++.|...+.|..|+++|+|++
T Consensus         6 ~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            6 FCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             ECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             cCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            344556666677777888899999999999999999999999999999999985

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=7e-12  Score=57.80  Aligned_cols=36  Identities=22%  Similarity=0.472  Sum_probs=33.7

Q ss_pred             CCCCCCCceecccchhhccCCchHHHHHhhhCCCCC
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKP   90 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp   90 (96)
                      +.|+++++|.|..|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            467889999999999999999999999999999986

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.21  E-value=4.3e-12  Score=57.45  Aligned_cols=33  Identities=21%  Similarity=0.446  Sum_probs=30.8

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCCCccc
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV   93 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C   93 (96)
                      ++|.|..|++.|...+.|..|+++|+|++||.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            469999999999999999999999999999964

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=3.2e-12  Score=70.61  Aligned_cols=44  Identities=23%  Similarity=0.437  Sum_probs=40.6

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +...|+++++|.|..|++.|.....|..|+++|++++||+|..|
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~   59 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQ   59 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchh
Confidence            35678899999999999999999999999999999999999765

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=4.6e-12  Score=64.43  Aligned_cols=36  Identities=44%  Similarity=0.821  Sum_probs=30.4

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   36 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLC   36 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTT
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCC
Confidence            368888888888888888888888888888888877

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.20  E-value=2.9e-12  Score=70.72  Aligned_cols=61  Identities=23%  Similarity=0.300  Sum_probs=51.3

Q ss_pred             cCCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          36 NGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+......+.....+..+.+.|.+.++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus        10 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   70 (96)
T 2dmd_A           10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC   70 (96)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSS
T ss_pred             ECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCC
Confidence            3444555666666677777888888999999999999999999999999999999999987

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.9e-12  Score=68.03  Aligned_cols=37  Identities=14%  Similarity=0.179  Sum_probs=35.5

Q ss_pred             CCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          60 NPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        60 ~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .++|.|..|++.|.....|..|+++|+|++||.|++|
T Consensus        37 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           37 RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            6789999999999999999999999999999999998

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.18  E-value=1.4e-11  Score=56.00  Aligned_cols=34  Identities=21%  Similarity=0.392  Sum_probs=32.0

Q ss_pred             CCCCCceecccchhhccCCchHHHHHhhhCCCCC
Q psy9655          57 VPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKP   90 (96)
Q Consensus        57 ~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp   90 (96)
                      |+++++|.|..|++.|...+.|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            6778899999999999999999999999999986

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.18  E-value=1.4e-11  Score=56.04  Aligned_cols=35  Identities=23%  Similarity=0.519  Sum_probs=32.5

Q ss_pred             CCCCCCceecccchhhccCCchHHHHHhhhCCCCC
Q psy9655          56 PVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKP   90 (96)
Q Consensus        56 ~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp   90 (96)
                      .|+++++|.|..|++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            36788999999999999999999999999999986

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=1.7e-11  Score=64.58  Aligned_cols=43  Identities=44%  Similarity=0.787  Sum_probs=39.5

Q ss_pred             CCCCCCCCceecc--cchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          54 NRPVPPNPSLSCT--YCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        54 ~~~~~~~~~~~C~--~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ...+++.++|.|.  .|++.|.....|..|+++|++++||.|.+|
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C   55 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRIC   55 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTT
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCC
Confidence            4567788999997  599999999999999999999999999988

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=1.3e-12  Score=73.06  Aligned_cols=41  Identities=22%  Similarity=0.369  Sum_probs=29.8

Q ss_pred             CCCCCCCceecccchhhc-cCCchHHHHHhhhCCCCCcccccC
Q psy9655          55 RPVPPNPSLSCTYCSRAF-KKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f-~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ..+.+.++|.|..|++.| .....|..|+++| +++||.|.+|
T Consensus        27 ~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~C   68 (96)
T 2ctd_A           27 LEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHC   68 (96)
T ss_dssp             HHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSS
T ss_pred             HHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCC
Confidence            344456677777777777 7777777777777 7777777776

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.15  E-value=3.1e-12  Score=71.89  Aligned_cols=60  Identities=23%  Similarity=0.359  Sum_probs=37.0

Q ss_pred             CCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          37 GQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +......+........+...|.+.++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus        20 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   79 (106)
T 2ee8_A           20 CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQEC   79 (106)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSS
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCc
Confidence            333444444444455555556666666777777777666667777666766677776665

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.14  E-value=1.5e-11  Score=61.78  Aligned_cols=35  Identities=34%  Similarity=0.604  Sum_probs=23.7

Q ss_pred             ceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   35 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYC   35 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCC
Confidence            36666677777666667777666766667766665

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.13  E-value=2.6e-12  Score=68.10  Aligned_cols=58  Identities=21%  Similarity=0.318  Sum_probs=49.8

Q ss_pred             cccCCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCc
Q psy9655          34 RENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPF   91 (96)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~   91 (96)
                      ...+......+........+.+.|.+.++|.|..|++.|.....|..|+++|+|++||
T Consensus        17 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           17 PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             SBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3445556666777777777888899999999999999999999999999999999997

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=5.3e-11  Score=64.26  Aligned_cols=35  Identities=17%  Similarity=0.512  Sum_probs=18.2

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      ++|.|..|++.|.....|..|+++|+++++|.|..
T Consensus        46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~   80 (86)
T 1x6h_A           46 AAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGEN   80 (86)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred             cceECCCCCChhCCHHHHHHHHHHccCCCCcccCC
Confidence            34555555555555555555555555555555544

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=2.3e-11  Score=56.35  Aligned_cols=36  Identities=22%  Similarity=0.464  Sum_probs=33.0

Q ss_pred             CCCCCceecc--cchhhccCCchHHHHHhhhCCCCCcc
Q psy9655          57 VPPNPSLSCT--YCSRAFKKRSDLTRHIRSHTKEKPFK   92 (96)
Q Consensus        57 ~~~~~~~~C~--~C~k~f~~~~~l~~h~~~htgekp~~   92 (96)
                      |+++++|.|.  .|++.|...+.|..|+++|++++||.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            4678899999  59999999999999999999999984

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=3.7e-11  Score=68.04  Aligned_cols=42  Identities=14%  Similarity=0.275  Sum_probs=37.7

Q ss_pred             CCCCCCCceecccchhhccCCchHHHHHh-hh---CCCCCcccccC
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRHIR-SH---TKEKPFKVRSL   96 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h~~-~h---tgekp~~C~~C   96 (96)
                      ...+++++|.|..|++.|...+.|..|++ +|   ++++||.|.+|
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~C   56 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVEC   56 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTT
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCC
Confidence            34578899999999999999999999997 59   67999999998

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.11  E-value=9.1e-11  Score=61.64  Aligned_cols=43  Identities=33%  Similarity=0.491  Sum_probs=37.8

Q ss_pred             CCCCCCCCceeccc--chhhccCCchHHHHHhhhCCCCCccccc--C
Q psy9655          54 NRPVPPNPSLSCTY--CSRAFKKRSDLTRHIRSHTKEKPFKVRS--L   96 (96)
Q Consensus        54 ~~~~~~~~~~~C~~--C~k~f~~~~~l~~h~~~htgekp~~C~~--C   96 (96)
                      .......++|.|..  |++.|.....|..|+++|++++||.|.+  |
T Consensus         9 ~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C   55 (72)
T 2epa_A            9 QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGC   55 (72)
T ss_dssp             CCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTC
T ss_pred             CCCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            34456677899998  9999999999999999999999999964  7

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.11  E-value=3.2e-12  Score=70.49  Aligned_cols=58  Identities=22%  Similarity=0.217  Sum_probs=47.4

Q ss_pred             CCCCCCCCCCCCCCcCCCC-CCCCCc--------eecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          38 QNQIVSEPPTDRTVSYNRP-VPPNPS--------LSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~-~~~~~~--------~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      ......+.....+..+.+. |.+.++        |.|..|++.|.....|..|+++|+|++||+|..
T Consensus        29 ~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           29 KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             CCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             cccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3445555556666666665 777776        899999999999999999999999999999974

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.09  E-value=8.5e-12  Score=68.71  Aligned_cols=60  Identities=20%  Similarity=0.260  Sum_probs=48.5

Q ss_pred             CCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCC--CCcccccC
Q psy9655          37 GQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKE--KPFKVRSL   96 (96)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htge--kp~~C~~C   96 (96)
                      +......+........+...|.+.++|.|..|++.|.....|..|+++|+++  +||.|.+|
T Consensus        10 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   71 (95)
T 2yt9_A           10 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSC   71 (95)
T ss_dssp             CSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSS
T ss_pred             CCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCc
Confidence            3344455555556666677788888999999999999999999999999987  99999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.08  E-value=3.4e-11  Score=65.69  Aligned_cols=37  Identities=41%  Similarity=0.745  Sum_probs=31.8

Q ss_pred             CCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          60 NPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        60 ~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   37 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDIC   37 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTT
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCC
Confidence            3578888899999888889999888888888988877

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=8.6e-11  Score=53.61  Aligned_cols=35  Identities=31%  Similarity=0.507  Sum_probs=32.1

Q ss_pred             CCCCCCCceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ..|.+.++|.|..|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            35778899999999999999999999999999985

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.07  E-value=8.8e-11  Score=53.97  Aligned_cols=36  Identities=22%  Similarity=0.421  Sum_probs=33.3

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCCC
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htge   88 (96)
                      +.+.|+++++|.|..|++.|.....|..|+++|+|+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            467789999999999999999999999999999985

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=8.4e-11  Score=54.08  Aligned_cols=35  Identities=37%  Similarity=0.643  Sum_probs=32.1

Q ss_pred             CCCCCCCceecccchhhccCC-chHHHHHhhhCCCC
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKR-SDLTRHIRSHTKEK   89 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~-~~l~~h~~~htgek   89 (96)
                      +.|.++++|.|..|++.|... +.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            467888999999999999999 99999999999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=6.8e-11  Score=54.09  Aligned_cols=34  Identities=26%  Similarity=0.450  Sum_probs=31.5

Q ss_pred             CCCCCCceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          56 PVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        56 ~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      .|.++++|.|..|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            5678889999999999999999999999999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=8.5e-11  Score=55.21  Aligned_cols=34  Identities=21%  Similarity=0.368  Sum_probs=30.7

Q ss_pred             CCCCCCceeccc--chhhccCCchHHHHHhhhCCCC
Q psy9655          56 PVPPNPSLSCTY--CSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        56 ~~~~~~~~~C~~--C~k~f~~~~~l~~h~~~htgek   89 (96)
                      .+.++++|.|.+  |++.|..++.|..|+++|+|+.
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            456789999986  9999999999999999999873

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=8.8e-11  Score=53.70  Aligned_cols=35  Identities=26%  Similarity=0.567  Sum_probs=32.2

Q ss_pred             CCCCCCCceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ..|.+.++|.|..|++.|...+.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            35788899999999999999999999999999875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.06  E-value=7.9e-12  Score=70.69  Aligned_cols=57  Identities=19%  Similarity=0.223  Sum_probs=44.9

Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          40 QIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ....+.....+..+...|.+.++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus        15 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   71 (110)
T 2csh_A           15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNIC   71 (110)
T ss_dssp             TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSS
T ss_pred             CCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCC
Confidence            444444455555666677777889999999999999999999999999999999887

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.05  E-value=3.5e-12  Score=69.54  Aligned_cols=51  Identities=31%  Similarity=0.516  Sum_probs=41.2

Q ss_pred             CCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          46 PTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .......+.+.|.+.++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus        18 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   68 (90)
T 1a1h_A           18 QSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDIC   68 (90)
T ss_dssp             SHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTT
T ss_pred             CHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCC
Confidence            333444455566677889999999999999999999999999999999887

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.04  E-value=4e-12  Score=68.15  Aligned_cols=47  Identities=28%  Similarity=0.492  Sum_probs=40.3

Q ss_pred             CCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          50 TVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        50 ~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ...+...|.+.++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus        17 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   63 (82)
T 2kmk_A           17 LSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC   63 (82)
T ss_dssp             HHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTT
T ss_pred             HHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCc
Confidence            33444556677889999999999999999999999999999999987

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=99.03  E-value=7e-12  Score=56.32  Aligned_cols=32  Identities=19%  Similarity=0.498  Sum_probs=29.9

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCCCcc
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFK   92 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~   92 (96)
                      ++|.|..|++.|...+.|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   32 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVALG   32 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCCC
Confidence            46999999999999999999999999999983

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.5e-10  Score=52.87  Aligned_cols=34  Identities=35%  Similarity=0.734  Sum_probs=31.2

Q ss_pred             CCCCCCceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          56 PVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        56 ~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      .+.+.++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4667889999999999999999999999999975

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.4e-10  Score=52.87  Aligned_cols=34  Identities=24%  Similarity=0.465  Sum_probs=31.5

Q ss_pred             CCCCCCceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          56 PVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        56 ~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      .|.+.++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5678889999999999999999999999999985

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.00  E-value=2.5e-10  Score=64.40  Aligned_cols=41  Identities=20%  Similarity=0.455  Sum_probs=38.6

Q ss_pred             CCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ..|++.++|.| .|++.|.....|..|++.|.+++||.|.+|
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   43 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVC   43 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTT
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCC
Confidence            46788999999 999999999999999999999999999988

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.00  E-value=2.7e-10  Score=62.56  Aligned_cols=39  Identities=28%  Similarity=0.601  Sum_probs=36.8

Q ss_pred             CCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          58 PPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        58 ~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ++.++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   41 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVC   41 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSS
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCC
Confidence            467789999999999999999999999999999999988

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.00  E-value=3.1e-11  Score=65.58  Aligned_cols=55  Identities=24%  Similarity=0.435  Sum_probs=46.0

Q ss_pred             CCCCCCCCCCcCCCCCCCCCceecc--cchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          42 VSEPPTDRTVSYNRPVPPNPSLSCT--YCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~C~--~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ..+........+...|.+.++|.|.  .|++.|.....|..|+++|++++||.|..|
T Consensus        15 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   71 (89)
T 2wbs_A           15 KTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKC   71 (89)
T ss_dssp             CEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSS
T ss_pred             CcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCC
Confidence            3344444555666778888999997  599999999999999999999999999987

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.1e-10  Score=59.43  Aligned_cols=38  Identities=18%  Similarity=0.400  Sum_probs=32.6

Q ss_pred             CCCCCceecccchhhccCCchHHHHHhhhCCCCCcccc-cC
Q psy9655          57 VPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVR-SL   96 (96)
Q Consensus        57 ~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~-~C   96 (96)
                      .-+.++|.|..|++.|. .+.|..|+++ ++++||+|. .|
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C   43 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQC   43 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCccc
Confidence            34667899999999999 8889999988 899999998 77

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.98  E-value=2.7e-10  Score=65.18  Aligned_cols=62  Identities=21%  Similarity=0.319  Sum_probs=48.5

Q ss_pred             ccCCCCCCCCCCCCCCCcCCC---CCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          35 ENGQNQIVSEPPTDRTVSYNR---PVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .........+........+..   .+.+.++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (124)
T 2dlq_A           36 FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSC  100 (124)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSS
T ss_pred             eECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCc
Confidence            334444555555555555544   35678889999999999999999999999999999999988

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.98  E-value=2.6e-10  Score=62.76  Aligned_cols=40  Identities=28%  Similarity=0.659  Sum_probs=37.4

Q ss_pred             CCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          57 VPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        57 ~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +.+.++|.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   42 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTC   42 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSS
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCC
Confidence            4567889999999999999999999999999999999988

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=98.98  E-value=5.2e-10  Score=62.61  Aligned_cols=41  Identities=32%  Similarity=0.682  Sum_probs=37.6

Q ss_pred             CCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          56 PVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        56 ~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .....++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus        11 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   51 (106)
T 2ee8_A           11 PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDIC   51 (106)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSS
T ss_pred             CcCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCc
Confidence            34566789999999999999999999999999999999988

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.96  E-value=5.3e-11  Score=64.25  Aligned_cols=47  Identities=17%  Similarity=0.364  Sum_probs=41.7

Q ss_pred             CCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCC----CCcccccC
Q psy9655          50 TVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKE----KPFKVRSL   96 (96)
Q Consensus        50 ~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htge----kp~~C~~C   96 (96)
                      ...+.+.|.+.++|.|..|++.|.....|..|++.|.++    +||.|.+|
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C   53 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKC   53 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSS
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCC
Confidence            455778899999999999999999999999999876665    89999988

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=9.7e-12  Score=70.82  Aligned_cols=48  Identities=19%  Similarity=0.409  Sum_probs=37.2

Q ss_pred             CCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcc
Q psy9655          45 PPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFK   92 (96)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~   92 (96)
                      .....+..+.+.|.++++|.|..|++.|.....|..|+++|.......
T Consensus        63 ~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~  110 (115)
T 2dmi_A           63 PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVS  110 (115)
T ss_dssp             CCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCSC
T ss_pred             ccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcccCC
Confidence            556667777788888888888888888888888888888876655443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.95  E-value=2.4e-10  Score=55.87  Aligned_cols=35  Identities=26%  Similarity=0.537  Sum_probs=29.7

Q ss_pred             CCCCCCceecccchhhccCCchHHHHHh-hhCCCCC
Q psy9655          56 PVPPNPSLSCTYCSRAFKKRSDLTRHIR-SHTKEKP   90 (96)
Q Consensus        56 ~~~~~~~~~C~~C~k~f~~~~~l~~h~~-~htgekp   90 (96)
                      +|+++++|.|..|++.|.....|..|++ +|+|+.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            3778899999999999999999999999 9998754

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=98.95  E-value=7.4e-12  Score=76.94  Aligned_cols=60  Identities=23%  Similarity=0.364  Sum_probs=42.6

Q ss_pred             CCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          37 GQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .......+........+.+.|.+.++|.|..|++.|.....|..|+++|+|++||.|.+|
T Consensus       108 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  167 (190)
T 2i13_A          108 CPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPEC  167 (190)
T ss_dssp             CTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTT
T ss_pred             CCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCC
Confidence            334444444445555566667777778888888888888888888888888888888776

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=4.2e-10  Score=51.86  Aligned_cols=34  Identities=21%  Similarity=0.359  Sum_probs=31.4

Q ss_pred             CCCCCCCceecccchhhccCCchHHHH-HhhhCCC
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRH-IRSHTKE   88 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h-~~~htge   88 (96)
                      +.|+++++|.|..|++.|...+.|..| +++|+|+
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            467889999999999999999999999 9999986

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=98.93  E-value=1.3e-10  Score=71.37  Aligned_cols=63  Identities=29%  Similarity=0.422  Sum_probs=39.1

Q ss_pred             cccCCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          34 RENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ..........+........+...|.+.++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus        21 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   83 (190)
T 2i13_A           21 PYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPEC   83 (190)
T ss_dssp             ----------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTT
T ss_pred             CCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCccc
Confidence            344445555666666666677777777788888888888888888888888888888888776

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.93  E-value=3.5e-10  Score=52.12  Aligned_cols=34  Identities=29%  Similarity=0.529  Sum_probs=30.7

Q ss_pred             CCCCCCceeccc--chhhccCCchHHHHHhhhCCCC
Q psy9655          56 PVPPNPSLSCTY--CSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        56 ~~~~~~~~~C~~--C~k~f~~~~~l~~h~~~htgek   89 (96)
                      .|+++++|.|..  |++.|...+.|..|+++|+|++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            367788999995  9999999999999999999985

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=98.93  E-value=9.3e-12  Score=70.99  Aligned_cols=58  Identities=28%  Similarity=0.426  Sum_probs=47.3

Q ss_pred             CCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccc--ccC
Q psy9655          39 NQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV--RSL   96 (96)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C--~~C   96 (96)
                      .....+........+...|.+.++|.|..|++.|.....|..|+++|+|++||.|  +.|
T Consensus        43 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  102 (119)
T 2jp9_A           43 DCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSC  102 (119)
T ss_dssp             TCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTC
T ss_pred             CCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCC
Confidence            3455555556666677778888889999999999999999999999999999999  666

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.93  E-value=4.6e-11  Score=66.21  Aligned_cols=57  Identities=26%  Similarity=0.383  Sum_probs=48.2

Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCceecc--cchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          40 QIVSEPPTDRTVSYNRPVPPNPSLSCT--YCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ....+........+.+.|.+.++|.|.  .|++.|.....|..|+++|++++||.|.+|
T Consensus        23 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   81 (100)
T 2ebt_A           23 CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVC   81 (100)
T ss_dssp             CCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSS
T ss_pred             CCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCC
Confidence            455555566666777788888999996  599999999999999999999999999987

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.92  E-value=2.6e-10  Score=52.91  Aligned_cols=32  Identities=22%  Similarity=0.381  Sum_probs=29.0

Q ss_pred             CCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          57 VPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        57 ~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      +.++++|.|..|+++|.++++|..|+       ||.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            56789999999999999999999998       788865

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.4e-09  Score=61.74  Aligned_cols=46  Identities=20%  Similarity=0.369  Sum_probs=22.5

Q ss_pred             CcCCCCCCCCCceecccchhhccCCchHHHHHhh--hCCCCCcc-cccC
Q psy9655          51 VSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRS--HTKEKPFK-VRSL   96 (96)
Q Consensus        51 ~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~--htgekp~~-C~~C   96 (96)
                      ..+.+.|.++++|.|..|++.|.....|..|+++  |.+++++. |.+|
T Consensus         8 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C   56 (115)
T 2dmi_A            8 KLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNN   56 (115)
T ss_dssp             CCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCC
T ss_pred             hhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCC
Confidence            3344445555555555555555555555555554  44444332 4443

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.89  E-value=4.3e-11  Score=71.26  Aligned_cols=55  Identities=29%  Similarity=0.460  Sum_probs=28.2

Q ss_pred             CCCCCCCCCCCcCCCCCCCCCceeccc--chhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          41 IVSEPPTDRTVSYNRPVPPNPSLSCTY--CSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      ...+.....+..+.+.|.+.++|.|..  |++.|.....|..|+++|++++||.|.+
T Consensus        69 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  125 (155)
T 2rpc_A           69 GKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEF  125 (155)
T ss_dssp             SCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSS
T ss_pred             ccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCC
Confidence            333444444444444555555555554  5555555555555555555555555553

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.89  E-value=9.6e-10  Score=47.50  Aligned_cols=29  Identities=31%  Similarity=0.611  Sum_probs=27.1

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ++|.|..|++.|...+.|..|+++|+|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            47999999999999999999999999875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.87  E-value=2.6e-10  Score=66.10  Aligned_cols=39  Identities=21%  Similarity=0.325  Sum_probs=36.4

Q ss_pred             CCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          56 PVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        56 ~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .|.++++|.|..|++.|.....|..|+++|  ++||.|.+|
T Consensus        68 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C  106 (129)
T 2wbt_A           68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVC  106 (129)
T ss_dssp             HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTT
T ss_pred             HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCC
Confidence            467789999999999999999999999999  999999988

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.86  E-value=6e-11  Score=66.82  Aligned_cols=54  Identities=17%  Similarity=0.164  Sum_probs=32.8

Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHh-hhCCCCCcccc
Q psy9655          40 QIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIR-SHTKEKPFKVR   94 (96)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~-~htgekp~~C~   94 (96)
                      ....+.....+..+.. |.++++|.|..|++.|.....|..|++ +|++++||.|.
T Consensus        48 C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           48 CSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             TCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            3334444444444443 666666777777777777777777775 67777776653

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.86  E-value=1.1e-09  Score=62.51  Aligned_cols=58  Identities=14%  Similarity=0.195  Sum_probs=36.0

Q ss_pred             CCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhh---hCCCCCcccccC
Q psy9655          39 NQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRS---HTKEKPFKVRSL   96 (96)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~---htgekp~~C~~C   96 (96)
                      .....+........+...|.+.++|.|..|++.|.....|..|++.   |.++++|.|.+|
T Consensus        12 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C   72 (124)
T 2dlq_A           12 TCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVC   72 (124)
T ss_dssp             TTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSS
T ss_pred             CCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCC
Confidence            3344444444455555566666667777777777777777777663   466677777665

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.85  E-value=1.2e-09  Score=53.00  Aligned_cols=36  Identities=25%  Similarity=0.664  Sum_probs=32.3

Q ss_pred             CCCCCCCCceecc--cchhhccCCchHHHHHhhhCCCC
Q psy9655          54 NRPVPPNPSLSCT--YCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        54 ~~~~~~~~~~~C~--~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ...|+++++|.|.  .|++.|...+.|..|+++|+|+|
T Consensus        10 ~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           10 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4458889999996  69999999999999999999985

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.85  E-value=1.6e-10  Score=60.46  Aligned_cols=58  Identities=19%  Similarity=0.242  Sum_probs=48.5

Q ss_pred             ccCCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcc
Q psy9655          35 ENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFK   92 (96)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~   92 (96)
                      ..+......+.....+..+.+.|.+.++|.|..|++.|.....|..|+++|.+++|..
T Consensus        10 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A           10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             eECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            3444555666666667777888999999999999999999999999999999999864

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.85  E-value=1.2e-09  Score=47.41  Aligned_cols=29  Identities=31%  Similarity=0.809  Sum_probs=27.3

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ++|.|..|++.|.....|..|+++|+|++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            67999999999999999999999999875

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=98.84  E-value=1.8e-10  Score=66.18  Aligned_cols=61  Identities=16%  Similarity=0.283  Sum_probs=50.2

Q ss_pred             ccCCCCCCCCCCCCCCCcCCCCCCCCCceeccc--chhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          35 ENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTY--CSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .........+........+...|.+.++|.|..  |++.|.....|..|+++|+|++||.|.+
T Consensus        35 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   97 (124)
T 1ubd_C           35 HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF   97 (124)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCS
T ss_pred             eECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCC
Confidence            344555666666667777888899999999986  9999999999999999999999999953

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=3.5e-11  Score=67.12  Aligned_cols=70  Identities=14%  Similarity=0.174  Sum_probs=56.3

Q ss_pred             cccccchhhhcccCCCCCCCCC-CCCCCCcCCCCCCC-CCceecccchhhccCCchHHHHHhhhCCCCCccc
Q psy9655          24 RSMESSEKENRENGQNQIVSEP-PTDRTVSYNRPVPP-NPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKV   93 (96)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C   93 (96)
                      .++..+..+....+......+. ....+..|.+.|.+ .++|.|.+|++.|.....|..|+++|++++|+..
T Consensus        14 ~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           14 QWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             HHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             HHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            3334444455566667777777 77778888888888 8999999999999999999999999999999753

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.84  E-value=2.3e-10  Score=68.04  Aligned_cols=55  Identities=20%  Similarity=0.309  Sum_probs=45.7

Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCceeccc--chhhccCCchHHHHHhhhCCCCCcccc
Q psy9655          40 QIVSEPPTDRTVSYNRPVPPNPSLSCTY--CSRAFKKRSDLTRHIRSHTKEKPFKVR   94 (96)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~f~~~~~l~~h~~~htgekp~~C~   94 (96)
                      ....+.....+..+.+.|.+.++|.|..  |++.|.....|..|+++|+|++||+|.
T Consensus        98 C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           98 CGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             TCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            5555666666677778888888999987  999999999999999999999999886

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.83  E-value=2.1e-09  Score=56.29  Aligned_cols=35  Identities=20%  Similarity=0.414  Sum_probs=31.9

Q ss_pred             CCCCCCCceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ..++.+++|.|..|++.|...+.|..|+++|++++
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            34678899999999999999999999999999975

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.83  E-value=2.4e-09  Score=47.42  Aligned_cols=29  Identities=38%  Similarity=0.736  Sum_probs=27.1

Q ss_pred             Cceecc--cchhhccCCchHHHHHhhhCCCC
Q psy9655          61 PSLSCT--YCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        61 ~~~~C~--~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ++|.|.  .|++.|...+.|..|+++|+|++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            579999  89999999999999999999985

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.83  E-value=1.9e-09  Score=46.69  Aligned_cols=30  Identities=23%  Similarity=0.557  Sum_probs=27.7

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEKP   90 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgekp   90 (96)
                      ++|.|..|++.|...+.|..|+++|++++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            368999999999999999999999999875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.83  E-value=1.4e-09  Score=46.90  Aligned_cols=29  Identities=52%  Similarity=0.933  Sum_probs=26.9

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ++|.|..|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            46999999999999999999999999875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.81  E-value=4.2e-10  Score=66.79  Aligned_cols=56  Identities=27%  Similarity=0.410  Sum_probs=46.1

Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCceeccc--chhhccCCchHHHHH-hhhCCCCCccccc
Q psy9655          40 QIVSEPPTDRTVSYNRPVPPNPSLSCTY--CSRAFKKRSDLTRHI-RSHTKEKPFKVRS   95 (96)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~f~~~~~l~~h~-~~htgekp~~C~~   95 (96)
                      ....+........+.+.|.+.++|.|..  |++.|.....|..|+ ++|++++||.|.+
T Consensus        75 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~  133 (155)
T 2gli_A           75 CRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKL  133 (155)
T ss_dssp             CCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCS
T ss_pred             CCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCC
Confidence            5555666666677777888888899998  999999999999998 7899999999977

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.81  E-value=2.6e-09  Score=56.73  Aligned_cols=39  Identities=26%  Similarity=0.635  Sum_probs=35.7

Q ss_pred             CCCCceeccc--chhhccCCchHHHHHh-hhCCCCCccccc--C
Q psy9655          58 PPNPSLSCTY--CSRAFKKRSDLTRHIR-SHTKEKPFKVRS--L   96 (96)
Q Consensus        58 ~~~~~~~C~~--C~k~f~~~~~l~~h~~-~htgekp~~C~~--C   96 (96)
                      ++.++|.|..  |++.|.....|..|++ .|++++||.|.+  |
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C   46 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPAC   46 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTT
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCC
Confidence            4567899997  9999999999999999 799999999987  7

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.81  E-value=1.3e-09  Score=46.97  Aligned_cols=29  Identities=38%  Similarity=0.795  Sum_probs=27.0

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ++|.|..|++.|.....|..|+++|+|++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            46999999999999999999999999875

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.80  E-value=1.7e-09  Score=46.52  Aligned_cols=29  Identities=21%  Similarity=0.589  Sum_probs=26.9

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ++|.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            46999999999999999999999999875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.80  E-value=2e-09  Score=60.46  Aligned_cols=59  Identities=15%  Similarity=0.067  Sum_probs=40.8

Q ss_pred             ccCCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          35 ENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ..+......+.....+..+.+.|  .++|.|..|++.|.....|..|++ |++++||+|.+|
T Consensus        17 ~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C   75 (107)
T 1wjp_A           17 YQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLEC   75 (107)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGG
T ss_pred             eECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccc
Confidence            34444555555555555555555  356888888888888888888885 888888888876

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=98.80  E-value=1.5e-09  Score=57.81  Aligned_cols=35  Identities=29%  Similarity=0.734  Sum_probs=33.6

Q ss_pred             ceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +|.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   35 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYC   35 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSS
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcC
Confidence            58999999999999999999999999999999987

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.29  E-value=5.4e-10  Score=48.45  Aligned_cols=29  Identities=41%  Similarity=0.787  Sum_probs=26.9

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ++|.|..|++.|...+.|..|+++|+|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            46999999999999999999999999875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.80  E-value=4.5e-10  Score=61.55  Aligned_cols=58  Identities=22%  Similarity=0.287  Sum_probs=50.5

Q ss_pred             hhcccCCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHH-hhhCCCC
Q psy9655          32 ENRENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHI-RSHTKEK   89 (96)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~-~~htgek   89 (96)
                      .....+......+.....+..+.+.|.++++|.|..|++.|.....|..|+ ++|++|.
T Consensus        26 ~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           26 AECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            334456777888888889999999999999999999999999999999996 6799875

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=98.79  E-value=1.6e-10  Score=65.83  Aligned_cols=57  Identities=25%  Similarity=0.364  Sum_probs=46.4

Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCceecc--cchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          40 QIVSEPPTDRTVSYNRPVPPNPSLSCT--YCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ....+........+...|.+.++|.|.  .|++.|.....|..|+++|++++||.|..|
T Consensus        14 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   72 (119)
T 2jp9_A           14 CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTC   72 (119)
T ss_dssp             SCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTT
T ss_pred             CcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCcc
Confidence            344444555555666677788889999  699999999999999999999999999987

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.79  E-value=1.8e-09  Score=47.56  Aligned_cols=29  Identities=45%  Similarity=0.938  Sum_probs=26.8

Q ss_pred             Cceecc--cchhhccCCchHHHHHhhhCCCC
Q psy9655          61 PSLSCT--YCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        61 ~~~~C~--~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ++|.|.  .|++.|...+.|..|+++|+|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            469998  89999999999999999999985

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.79  E-value=1.8e-09  Score=58.56  Aligned_cols=37  Identities=43%  Similarity=0.815  Sum_probs=34.2

Q ss_pred             CCceecc--cchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          60 NPSLSCT--YCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        60 ~~~~~C~--~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +++|.|.  .|++.|.....|..|+++|.+++||.|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   40 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRIC   40 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTT
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCC
Confidence            5789998  599999999999999999999999999987

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=98.78  E-value=4.7e-10  Score=64.35  Aligned_cols=52  Identities=27%  Similarity=0.319  Sum_probs=42.1

Q ss_pred             CCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          43 SEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      .+........+...| +.++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus        16 ~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   67 (124)
T 1ubd_C           16 MFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   67 (124)
T ss_dssp             EESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCS
T ss_pred             ccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCC
Confidence            333344444555566 6778999999999999999999999999999999975

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.22  E-value=1e-09  Score=47.74  Aligned_cols=29  Identities=41%  Similarity=0.746  Sum_probs=27.0

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ++|.|..|++.|...+.|..|+++|+|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            57999999999999999999999999875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.73  E-value=3.3e-09  Score=56.77  Aligned_cols=44  Identities=18%  Similarity=0.351  Sum_probs=27.9

Q ss_pred             CCCcCCCCCCCCCceeccc--chhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          49 RTVSYNRPVPPNPSLSCTY--CSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        49 ~~~~~~~~~~~~~~~~C~~--C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      ....+.+.|.+.++|.|..  |++.|.....|..|+++|++   |.|..
T Consensus        18 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~   63 (85)
T 2j7j_A           18 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKK   63 (85)
T ss_dssp             HHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCS
T ss_pred             HHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCC
Confidence            3344445556666677766  77777777777777777666   66655

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=3.1e-09  Score=56.72  Aligned_cols=46  Identities=11%  Similarity=0.078  Sum_probs=41.2

Q ss_pred             CCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          49 RTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        49 ~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+..|...+.+.+++.|..|++.|. ...|..|+ .|.+++||.|..|
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C   49 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNC   49 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSS
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccC
Confidence            4556778889999999999999995 89999999 9999999999987

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.73  E-value=7e-10  Score=55.52  Aligned_cols=49  Identities=24%  Similarity=0.433  Sum_probs=40.3

Q ss_pred             CCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          41 IVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ...+........+.+.|.+.++|.|..|++.|.....|..|+++|++++
T Consensus         8 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            8 GIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             cCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            3344444555566777888999999999999999999999999999886

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=98.73  E-value=1e-09  Score=67.30  Aligned_cols=56  Identities=23%  Similarity=0.255  Sum_probs=40.0

Q ss_pred             CCCCCCCCCCCCcCC-CCC-CCCCceec--ccchhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          40 QIVSEPPTDRTVSYN-RPV-PPNPSLSC--TYCSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        40 ~~~~~~~~~~~~~~~-~~~-~~~~~~~C--~~C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      ....+........+. ..| .+.++|.|  ..|++.|.....|..|+++|+|++||.|..
T Consensus        80 C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  139 (190)
T 1tf6_A           80 CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH  139 (190)
T ss_dssp             CCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCS
T ss_pred             CCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCC
Confidence            444444444444444 555 45677888  778888888888888888888888888876

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.72  E-value=4.4e-09  Score=45.64  Aligned_cols=29  Identities=34%  Similarity=0.699  Sum_probs=26.5

Q ss_pred             CceecccchhhccCCchHHHH-HhhhCCCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRH-IRSHTKEK   89 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h-~~~htgek   89 (96)
                      ++|.|..|++.|...+.|..| +++|+|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            469999999999999999999 79999975

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.71  E-value=5.7e-10  Score=62.23  Aligned_cols=62  Identities=6%  Similarity=0.115  Sum_probs=51.1

Q ss_pred             hhcccCCCCCCCC-CCCCCCCcCCCCCCCCCceecccchhhccCCchHHHH-HhhhCCCCCcccc
Q psy9655          32 ENRENGQNQIVSE-PPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRH-IRSHTKEKPFKVR   94 (96)
Q Consensus        32 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h-~~~htgekp~~C~   94 (96)
                      +....+......+ .....+..|.+.| ++++|.|.+|++.|.....|..| +++|+++..|.+.
T Consensus        32 ~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~~~   95 (96)
T 2ctd_A           32 KGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPSS   95 (96)
T ss_dssp             TSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCSCC
T ss_pred             CCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCCCC
Confidence            3344566677777 7777788888889 99999999999999999999999 9999987666553

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.71  E-value=7.4e-10  Score=58.18  Aligned_cols=60  Identities=22%  Similarity=0.225  Sum_probs=48.9

Q ss_pred             hhhcccCCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCC
Q psy9655          31 KENRENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKP   90 (96)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp   90 (96)
                      .+....+......+.....+..+.+.|.+.++|.|..|++.|.....|..|+++|+++.+
T Consensus        11 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A           11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            334445556666677777777788889999999999999999999999999999998754

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.68  E-value=6.6e-09  Score=44.46  Aligned_cols=27  Identities=30%  Similarity=0.678  Sum_probs=25.3

Q ss_pred             CceecccchhhccCCchHHHHHhhhCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTK   87 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htg   87 (96)
                      ++|.|..|++.|...+.|..|+++|+|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            579999999999999999999999975

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.66  E-value=6.2e-09  Score=44.10  Aligned_cols=27  Identities=37%  Similarity=0.804  Sum_probs=24.1

Q ss_pred             ceecccchhhccCCchHHHHHhhhCCC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~htge   88 (96)
                      +|.|..|++.|...+.|..|+++|+|+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            489999999999999999999999875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.65  E-value=1.3e-09  Score=64.66  Aligned_cols=54  Identities=26%  Similarity=0.453  Sum_probs=46.8

Q ss_pred             CCCCCCCCCCcCCCCCCCCCceeccc--chhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          42 VSEPPTDRTVSYNRPVPPNPSLSCTY--CSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      ..+.....+..+...|.+.++|.|..  |++.|.....|..|+++|++++||.|.+
T Consensus        47 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  102 (155)
T 2gli_A           47 RPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEH  102 (155)
T ss_dssp             CCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCS
T ss_pred             hhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCC
Confidence            44555556667778888899999985  9999999999999999999999999987

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.64  E-value=1.1e-08  Score=43.47  Aligned_cols=26  Identities=31%  Similarity=0.728  Sum_probs=24.4

Q ss_pred             CceecccchhhccCCchHHHHHhhhC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~ht   86 (96)
                      ++|.|..|++.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            57999999999999999999999985

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.63  E-value=9e-09  Score=43.89  Aligned_cols=26  Identities=19%  Similarity=0.574  Sum_probs=24.3

Q ss_pred             CceecccchhhccCCchHHHHHhhhC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~ht   86 (96)
                      ++|.|..|++.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            57999999999999999999999885

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.60  E-value=1.5e-10  Score=63.03  Aligned_cols=55  Identities=16%  Similarity=0.307  Sum_probs=43.9

Q ss_pred             CCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          41 IVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ...+........+...|.+.++|.|..|++.|.....|..|+++|.+ ++|.|..|
T Consensus        10 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C   64 (88)
T 1llm_C           10 MRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKV   64 (88)
T ss_dssp             CCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHH
Confidence            33444444555566677888899999999999999999999999885 88998776

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=98.57  E-value=2.1e-09  Score=65.87  Aligned_cols=59  Identities=12%  Similarity=0.212  Sum_probs=38.8

Q ss_pred             CCCCCCCCCCCCCCcCCCCCCCCCceecc--cchhhccCCchHHHHH-hhh-CCCCCccc--ccC
Q psy9655          38 QNQIVSEPPTDRTVSYNRPVPPNPSLSCT--YCSRAFKKRSDLTRHI-RSH-TKEKPFKV--RSL   96 (96)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~k~f~~~~~l~~h~-~~h-tgekp~~C--~~C   96 (96)
                      ......+........+...|.+.++|.|.  .|++.|.....|..|+ +.| .++++|.|  ..|
T Consensus        48 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C  112 (190)
T 1tf6_A           48 EGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENC  112 (190)
T ss_dssp             TTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSS
T ss_pred             CCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCC
Confidence            34455555555566666667777777777  6777777777777777 556 46677777  555

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.55  E-value=8.8e-08  Score=52.67  Aligned_cols=39  Identities=36%  Similarity=0.734  Sum_probs=34.9

Q ss_pred             CCCCceeccc--chhhccCCchHHHHHhhhCCCCCcccc--cC
Q psy9655          58 PPNPSLSCTY--CSRAFKKRSDLTRHIRSHTKEKPFKVR--SL   96 (96)
Q Consensus        58 ~~~~~~~C~~--C~k~f~~~~~l~~h~~~htgekp~~C~--~C   96 (96)
                      ...+.|.|..  |++.|.....|..|+++|.+++||.|.  .|
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   53 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGC   53 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSC
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCC
Confidence            3456799997  999999999999999999999999996  46

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.53  E-value=3.4e-08  Score=53.27  Aligned_cols=36  Identities=36%  Similarity=0.829  Sum_probs=33.2

Q ss_pred             CCceeccc--chhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          60 NPSLSCTY--CSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        60 ~~~~~C~~--C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      ...|.|..  |++.|.....|..|+++|.+++||.|.+
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   40 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDW   40 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCC
Confidence            35699999  9999999999999999999999999973

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.93  E-value=1.1e-08  Score=43.09  Aligned_cols=26  Identities=35%  Similarity=0.737  Sum_probs=23.9

Q ss_pred             CceecccchhhccCCchHHHHHhhhC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~ht   86 (96)
                      ++|.|..|++.|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            46999999999999999999999884

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.48  E-value=5.8e-08  Score=41.49  Aligned_cols=27  Identities=37%  Similarity=0.714  Sum_probs=25.0

Q ss_pred             Cceecc--cchhhccCCchHHHHHhhhCC
Q psy9655          61 PSLSCT--YCSRAFKKRSDLTRHIRSHTK   87 (96)
Q Consensus        61 ~~~~C~--~C~k~f~~~~~l~~h~~~htg   87 (96)
                      ++|.|.  .|++.|...+.|..|+++|+|
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            469999  999999999999999999985

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.47  E-value=2.8e-09  Score=57.07  Aligned_cols=35  Identities=34%  Similarity=0.634  Sum_probs=32.9

Q ss_pred             ceec--ccchhhccCCchHHHHHhhhCCCCCccccc--C
Q psy9655          62 SLSC--TYCSRAFKKRSDLTRHIRSHTKEKPFKVRS--L   96 (96)
Q Consensus        62 ~~~C--~~C~k~f~~~~~l~~h~~~htgekp~~C~~--C   96 (96)
                      +|.|  ..|++.|.....|..|+++|++++||.|.+  |
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   39 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGC   39 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTC
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCC
Confidence            5899  889999999999999999999999999987  7

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=3.4e-08  Score=51.32  Aligned_cols=42  Identities=21%  Similarity=0.280  Sum_probs=36.5

Q ss_pred             CCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          48 DRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        48 ~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .....+.+.|.+.++|.|..|++.|.....|..       ++||.|..|
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C   45 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKC   45 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHH
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCC
Confidence            345667888999999999999999999999886       899999876

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.46  E-value=1.3e-08  Score=51.27  Aligned_cols=50  Identities=22%  Similarity=0.347  Sum_probs=40.0

Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHH-hhhCCCC
Q psy9655          40 QIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHI-RSHTKEK   89 (96)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~-~~htgek   89 (96)
                      ....+........+.+.|.+.++|.|..|++.|.....|..|+ ++|+++.
T Consensus         8 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            8 CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             TCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            3344445555666777888999999999999999999999997 7898764

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.46  E-value=3e-07  Score=50.17  Aligned_cols=36  Identities=19%  Similarity=0.247  Sum_probs=32.9

Q ss_pred             CceecccchhhccCCchHHHHHhh-hCCCCC--------cccccC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRS-HTKEKP--------FKVRSL   96 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~-htgekp--------~~C~~C   96 (96)
                      ..|.|..|++.|.....|..|+++ |++++|        |.|..|
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C   68 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPRE   68 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSST
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCC
Confidence            347899999999999999999998 999998        999887

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.41  E-value=8.7e-09  Score=51.38  Aligned_cols=50  Identities=16%  Similarity=0.153  Sum_probs=39.6

Q ss_pred             CCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCC
Q psy9655          38 QNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTK   87 (96)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htg   87 (96)
                      ......+........+.+.|.+.++|.|..|++.|.....|..|+++|.+
T Consensus         8 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            8 SYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             TTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            33444555555666677778889999999999999999999999998863

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=3.1e-07  Score=47.20  Aligned_cols=51  Identities=18%  Similarity=0.206  Sum_probs=39.6

Q ss_pred             CCCCCCCCCCCCCcCCCCCCCCCceecc-cchhhccCCchHHHHHhhhCCCCCc
Q psy9655          39 NQIVSEPPTDRTVSYNRPVPPNPSLSCT-YCSRAFKKRSDLTRHIRSHTKEKPF   91 (96)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~C~-~C~k~f~~~~~l~~h~~~htgekp~   91 (96)
                      .....+. ......|.+. .++++|.|. .|++.|...+.|..|+++|...+|+
T Consensus        15 ~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~i   66 (66)
T 2eod_A           15 YCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALV   66 (66)
T ss_dssp             SSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCCC
T ss_pred             ccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCcC
Confidence            3344444 4445555556 788999999 9999999999999999999988763

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.30  E-value=5.4e-08  Score=51.45  Aligned_cols=66  Identities=17%  Similarity=0.180  Sum_probs=48.4

Q ss_pred             cccchhhhcccCCCCCCCCCCCCCCCcCCC-CCCCC-CceecccchhhccCCchHHHHHhh-hCCCCCc
Q psy9655          26 MESSEKENRENGQNQIVSEPPTDRTVSYNR-PVPPN-PSLSCTYCSRAFKKRSDLTRHIRS-HTKEKPF   91 (96)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~C~~C~k~f~~~~~l~~h~~~-htgekp~   91 (96)
                      +.....+....+......+.....+..+.. .|.+. ++|.|..|++.|.....|..|+++ |.++.|.
T Consensus         7 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~   75 (77)
T 2ct1_A            7 GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS   75 (77)
T ss_dssp             CCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCCC
T ss_pred             ccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            333444444555666666666666667765 57764 899999999999999999999987 6667764

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.26  E-value=3.4e-08  Score=50.62  Aligned_cols=53  Identities=11%  Similarity=0.177  Sum_probs=40.5

Q ss_pred             ccCCCCCCCCCCCCCCCcCCCC-C-CCCCceecccchhhccCCchHHHHHhhhCC
Q psy9655          35 ENGQNQIVSEPPTDRTVSYNRP-V-PPNPSLSCTYCSRAFKKRSDLTRHIRSHTK   87 (96)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~C~~C~k~f~~~~~l~~h~~~htg   87 (96)
                      ..+......+........+... | .+.++|.|..|++.|.....|..|+++|.|
T Consensus        11 ~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             eECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            3344455555555556666665 6 588999999999999999999999998865

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.25  E-value=1.6e-08  Score=53.61  Aligned_cols=56  Identities=14%  Similarity=0.173  Sum_probs=42.0

Q ss_pred             CCCCCCCCCCCCCCcCCCCCCC---CCceecccchhhccCCchHHHHH-hhhCCCCCccc
Q psy9655          38 QNQIVSEPPTDRTVSYNRPVPP---NPSLSCTYCSRAFKKRSDLTRHI-RSHTKEKPFKV   93 (96)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~C~~C~k~f~~~~~l~~h~-~~htgekp~~C   93 (96)
                      ......+.....+..+.+.|.+   .++|.|..|++.|.....|..|+ +.|.+++|...
T Consensus        11 ~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A           11 EICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             SSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            3344444445555555666664   78899999999999999999999 67999888653

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.24  E-value=1.5e-08  Score=53.05  Aligned_cols=48  Identities=27%  Similarity=0.391  Sum_probs=40.1

Q ss_pred             CCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhC
Q psy9655          39 NQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~ht   86 (96)
                      .....+........+.+.|.+.++|.|..|++.|.....|..|+++|+
T Consensus        26 ~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           26 SCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             TBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            355556666666677778889999999999999999999999999985

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.23  E-value=1.4e-07  Score=46.64  Aligned_cols=28  Identities=11%  Similarity=0.096  Sum_probs=25.7

Q ss_pred             hhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          69 SRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        69 ~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ++.|.....|..|+++|+|++||.|.+|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C   30 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPIC   30 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTT
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCC
Confidence            4678889999999999999999999998

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.04  E-value=1.3e-07  Score=49.25  Aligned_cols=46  Identities=24%  Similarity=0.452  Sum_probs=38.6

Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCceeccc--chhhccCCchHHHHHhhh
Q psy9655          40 QIVSEPPTDRTVSYNRPVPPNPSLSCTY--CSRAFKKRSDLTRHIRSH   85 (96)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~f~~~~~l~~h~~~h   85 (96)
                      ....+.....+..+.+.|.++++|.|.+  |++.|.....|..|+++|
T Consensus        25 C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             TCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            5556666666777788899999999975  999999999999999876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.00  E-value=2.8e-07  Score=53.09  Aligned_cols=54  Identities=9%  Similarity=0.102  Sum_probs=43.8

Q ss_pred             hcccCCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCC
Q psy9655          33 NRENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htge   88 (96)
                      ....+......+........+.+.|  .++|.|..|++.|...+.|..|+++|+|.
T Consensus        73 ~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           73 SQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            3344555666677666777777777  78899999999999999999999999886

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=97.67  E-value=7.4e-06  Score=36.76  Aligned_cols=16  Identities=31%  Similarity=0.422  Sum_probs=14.9

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |+++|+|++||+|..|
T Consensus         2 H~~~h~~~k~~~C~~C   17 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDC   17 (37)
T ss_dssp             CSSTTCCSSSBCCTTT
T ss_pred             CCCcCCCCCCccCCCC
Confidence            7789999999999988

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.45  E-value=1.8e-05  Score=36.44  Aligned_cols=16  Identities=19%  Similarity=0.312  Sum_probs=14.5

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |+++|++++||.|.+|
T Consensus         1 H~~~H~~~k~~~C~~C   16 (42)
T 2yte_A            1 GSSGSSGEKPYSCAEC   16 (42)
T ss_dssp             CCSSSCSCCSCBCTTT
T ss_pred             CCcCcCCCCCeECCCC
Confidence            5788999999999988

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.44  E-value=1.4e-05  Score=37.30  Aligned_cols=17  Identities=29%  Similarity=0.311  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      +|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKC   18 (44)
T ss_dssp             CCSCCCSCCCSEECSSS
T ss_pred             CCccccCCCCCeECCCC
Confidence            47889999999999988

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=97.42  E-value=1.9e-05  Score=36.37  Aligned_cols=16  Identities=13%  Similarity=0.293  Sum_probs=14.5

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |+++|+|++||+|.+|
T Consensus         1 H~~~H~~~k~~~C~~C   16 (42)
T 2el5_A            1 GSSGSSGENPYECSEC   16 (42)
T ss_dssp             CCSSSSSCCSEECSSS
T ss_pred             CCCCCCCCCCccCCCc
Confidence            5788999999999988

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.42  E-value=1.9e-05  Score=36.78  Aligned_cols=17  Identities=24%  Similarity=0.235  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (44)
T 2eoj_A            2 SSGSSGTGENPYECCEC   18 (44)
T ss_dssp             CSCCSSSSCCSCEETTT
T ss_pred             CCccccCCCcCeeCCCC
Confidence            47889999999999988

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.41  E-value=3.9e-05  Score=44.54  Aligned_cols=33  Identities=27%  Similarity=0.587  Sum_probs=29.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhh
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRS   84 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~   84 (96)
                      .....++|.++|.|..|++.|.+...|..|+++
T Consensus        40 ~~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           40 EFDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            345678899999999999999999999999875

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.40  E-value=1.7e-05  Score=36.56  Aligned_cols=16  Identities=25%  Similarity=0.364  Sum_probs=14.8

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |+++|+|++||.|.+|
T Consensus         2 H~~~H~~~k~~~C~~C   17 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQC   17 (42)
T ss_dssp             CCCCCCSCCSBCCTTT
T ss_pred             CccccCCCCCeeCCCc
Confidence            7789999999999988

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.40  E-value=2e-05  Score=36.85  Aligned_cols=17  Identities=24%  Similarity=0.311  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (44)
T 2epv_A            2 SSGSSGSGEKPYECNEC   18 (44)
T ss_dssp             CCCCCCCCCCSEECSSS
T ss_pred             CCCcccCCCcCeECCCC
Confidence            47889999999999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.36  E-value=1.5e-05  Score=37.57  Aligned_cols=17  Identities=18%  Similarity=0.257  Sum_probs=15.5

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|+|++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNEC   18 (46)
T ss_dssp             CCCCCCSCCCCEECSSS
T ss_pred             CCCCCCCCCCCEEcccc
Confidence            57889999999999987

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.36  E-value=2.4e-05  Score=36.08  Aligned_cols=16  Identities=31%  Similarity=0.416  Sum_probs=14.6

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |+++|+|++||.|..|
T Consensus         2 H~~~H~~~k~~~C~~C   17 (42)
T 2en2_A            2 SSGSSGGEKPYKCETC   17 (42)
T ss_dssp             CCCCCCSSCSEECTTT
T ss_pred             CCcccCCCCCEeCCCc
Confidence            6788999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.35  E-value=2.6e-05  Score=36.73  Aligned_cols=17  Identities=29%  Similarity=0.249  Sum_probs=15.5

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      +|+++|+|++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAEC   18 (46)
T ss_dssp             CSSCTTSSCCSEECSSS
T ss_pred             CcccCCCCCcCeECCCC
Confidence            57889999999999988

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.34  E-value=2e-05  Score=37.14  Aligned_cols=17  Identities=35%  Similarity=0.366  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      +|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDC   18 (46)
T ss_dssp             CCCCCCCSCCCEECSSS
T ss_pred             CcccccCCCCCEECccc
Confidence            47889999999999988

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.34  E-value=2e-05  Score=37.14  Aligned_cols=17  Identities=29%  Similarity=0.286  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      +|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVC   18 (46)
T ss_dssp             CSCCCCSSCCSEEETTT
T ss_pred             CccccCCCCCCeECccc
Confidence            47889999999999988

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.33  E-value=2.9e-05  Score=36.55  Aligned_cols=17  Identities=35%  Similarity=0.421  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKEC   18 (46)
T ss_dssp             CCCCCSCCCCSEECSSS
T ss_pred             ccccccCCCCCeeCccc
Confidence            47889999999999988

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=97.33  E-value=2.2e-05  Score=36.99  Aligned_cols=17  Identities=35%  Similarity=0.350  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2emj_A            2 SSGSSGTGEKPFECAEC   18 (46)
T ss_dssp             CCCCCCCCCCSEECSSS
T ss_pred             CCCCCCCCCCCEECCCC
Confidence            47889999999999988

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.31  E-value=2.5e-05  Score=36.73  Aligned_cols=17  Identities=29%  Similarity=0.342  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      +|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAEC   18 (46)
T ss_dssp             CCCSSSSCCCSEECSSS
T ss_pred             CCCCCCCCCCCeECCCC
Confidence            47889999999999988

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.31  E-value=3.1e-05  Score=36.48  Aligned_cols=17  Identities=18%  Similarity=0.311  Sum_probs=15.2

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKEC   18 (46)
T ss_dssp             CCCCSCCCSCSCCCSSS
T ss_pred             CCCCCcCCCCCcCCCCc
Confidence            37789999999999988

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.31  E-value=2.6e-05  Score=36.72  Aligned_cols=17  Identities=29%  Similarity=0.378  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||+|.+|
T Consensus         2 ~h~~~H~~~k~~~C~~C   18 (46)
T 2emz_A            2 SSGSSGSGERPFKCNEC   18 (46)
T ss_dssp             CCCSCSSCCCSCCCSSS
T ss_pred             CCCcCCCCCCCeECCCC
Confidence            47889999999999988

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.30  E-value=3.2e-05  Score=36.42  Aligned_cols=17  Identities=18%  Similarity=0.231  Sum_probs=15.2

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2em4_A            2 SSGSSGTGQRPYECIEC   18 (46)
T ss_dssp             CSCCCCCCSSSEECSSS
T ss_pred             CCccccCCCcCcCCCCC
Confidence            37889999999999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.30  E-value=2.4e-05  Score=36.80  Aligned_cols=17  Identities=24%  Similarity=0.202  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYC   18 (46)
T ss_dssp             CCCCTTCCCCSEECSSS
T ss_pred             CCCCCCCCCCCeECCCC
Confidence            47889999999999987

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.30  E-value=3.1e-05  Score=34.84  Aligned_cols=14  Identities=7%  Similarity=0.031  Sum_probs=12.8

Q ss_pred             hhhCCCCCcccccC
Q psy9655          83 RSHTKEKPFKVRSL   96 (96)
Q Consensus        83 ~~htgekp~~C~~C   96 (96)
                      ++|+|++||+|..|
T Consensus         2 ~~H~~~k~~~C~~C   15 (37)
T 2elm_A            2 SSGSSGHLYYCSQC   15 (37)
T ss_dssp             CSSSSSCEEECSSS
T ss_pred             CccCCCcCeECCCC
Confidence            57999999999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.30  E-value=2.7e-05  Score=36.59  Aligned_cols=17  Identities=24%  Similarity=0.176  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKEC   18 (46)
T ss_dssp             CCCCCSSCCCCCCBTTT
T ss_pred             CCcccCCCCCCeECCCC
Confidence            47889999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=97.30  E-value=2.6e-05  Score=36.69  Aligned_cols=17  Identities=29%  Similarity=0.219  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2em0_A            2 SSGSSGMGEKTWKCREC   18 (46)
T ss_dssp             CCCCCSCCCCCCCCSSS
T ss_pred             CCcCccCCCcCeECCCC
Confidence            47889999999999987

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.30  E-value=3.3e-05  Score=35.59  Aligned_cols=16  Identities=25%  Similarity=0.268  Sum_probs=14.7

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |+++|++++||.|.+|
T Consensus         2 H~~~H~~~k~~~C~~C   17 (42)
T 2eos_A            2 SSGSSGGEKPYPCEIC   17 (42)
T ss_dssp             CCSCCSSSCCBCCSSS
T ss_pred             CCcccCCCCCEECCCC
Confidence            6789999999999988

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.29  E-value=2.6e-05  Score=36.72  Aligned_cols=17  Identities=35%  Similarity=0.370  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNEC   18 (46)
T ss_dssp             CCCCCCCCSCCCCCTTT
T ss_pred             CcccccCCCCCeECCcC
Confidence            47889999999999988

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.29  E-value=2.8e-05  Score=36.63  Aligned_cols=17  Identities=29%  Similarity=0.356  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEEC   18 (46)
T ss_dssp             CCCSCCCCSSSBCCSSS
T ss_pred             CcccCCCCCcCCCCCCC
Confidence            47889999999999988

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.28  E-value=3.7e-05  Score=35.71  Aligned_cols=17  Identities=29%  Similarity=0.331  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (44)
T 2eof_A            2 SSGSSGTGEKPYECNEC   18 (44)
T ss_dssp             CCSSCCSCCCSEECTTT
T ss_pred             CCccCCCCCCCeECCCC
Confidence            47889999999999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.28  E-value=2.6e-05  Score=36.69  Aligned_cols=17  Identities=29%  Similarity=0.298  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      +|+++|+|++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVC   18 (46)
T ss_dssp             CCCCCCSSCCSEECSSS
T ss_pred             CccCCcCCCCCeeCCCc
Confidence            47889999999999987

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.28  E-value=2.8e-05  Score=36.61  Aligned_cols=17  Identities=24%  Similarity=0.251  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNEC   18 (46)
T ss_dssp             CCCCSSSSSCSSSCCSS
T ss_pred             CcccccCCCCCeECCCC
Confidence            47889999999999988

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.28  E-value=3.7e-05  Score=35.70  Aligned_cols=17  Identities=24%  Similarity=0.165  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNEC   18 (44)
T ss_dssp             CSCCCSSSSSSSCCTTT
T ss_pred             CCCcCCCCCcCeECCCC
Confidence            47889999999999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.27  E-value=2.9e-05  Score=36.45  Aligned_cols=17  Identities=29%  Similarity=0.258  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2emm_A            2 SSGSSGTGERPHKCNEC   18 (46)
T ss_dssp             CCCSCSSCCCSEECSSS
T ss_pred             CCcCCcCCCCCeeCCCC
Confidence            47889999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.27  E-value=2.9e-05  Score=36.51  Aligned_cols=17  Identities=24%  Similarity=0.223  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2emh_A            2 SSGSSGTGERPYICTVC   18 (46)
T ss_dssp             CCCCSCSCCCSEECTTT
T ss_pred             CCCCCCCCCCCcCCCCC
Confidence            47889999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=97.27  E-value=2.9e-05  Score=36.54  Aligned_cols=17  Identities=29%  Similarity=0.204  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      +|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNEC   18 (46)
T ss_dssp             CSCSSCTTSCCEECSSS
T ss_pred             CCccCCCCCcCcCCCCC
Confidence            47889999999999987

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.27  E-value=3.6e-05  Score=36.21  Aligned_cols=17  Identities=18%  Similarity=0.141  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2ytp_A            2 SSGSSGTGERHYECSEC   18 (46)
T ss_dssp             CCCCSSCCCCCEECSSS
T ss_pred             CcccCcCCCCCeECCcC
Confidence            47889999999999988

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.27  E-value=3.6e-05  Score=36.20  Aligned_cols=17  Identities=18%  Similarity=0.141  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C   18 (46)
T 2emi_A            2 SSGSSGTGERHYECSEC   18 (46)
T ss_dssp             CCCCSCSSCCCEECSSS
T ss_pred             CCCcccCCCCCCCCCCC
Confidence            47889999999999988

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.26  E-value=4.2e-05  Score=36.04  Aligned_cols=16  Identities=38%  Similarity=0.397  Sum_probs=14.7

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |+++|++++||.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C   18 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVC   18 (46)
T ss_dssp             CSSSCSSCCSCBCSSS
T ss_pred             CCCCCCCCcccCCCCC
Confidence            6789999999999988

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.26  E-value=3.5e-05  Score=35.86  Aligned_cols=16  Identities=25%  Similarity=0.333  Sum_probs=14.5

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |+++|+|++||.|.+|
T Consensus         1 H~~~H~~~k~~~C~~C   16 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCC   16 (44)
T ss_dssp             CCCCCSSCCCEECSSS
T ss_pred             CCCCcCCCcCccCCCC
Confidence            6788999999999987

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.26  E-value=4e-05  Score=36.03  Aligned_cols=17  Identities=35%  Similarity=0.370  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNEC   18 (46)
T ss_dssp             CCCCCCCCCCSCBCSSS
T ss_pred             CCCcCCCCCcCeECCCC
Confidence            47889999999999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=97.26  E-value=3e-05  Score=36.52  Aligned_cols=17  Identities=29%  Similarity=0.378  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      +|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2emk_A            2 SSGSSGTGEKPYECKEC   18 (46)
T ss_dssp             CCCCCCSSSCSCBCSSS
T ss_pred             CCCCccCCCCceECCCC
Confidence            47889999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.26  E-value=3.1e-05  Score=36.37  Aligned_cols=17  Identities=35%  Similarity=0.366  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      +|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C   18 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDC   18 (46)
T ss_dssp             CCCCCCSSCCSCBCSSS
T ss_pred             CCCCCCCCCCCccCCcc
Confidence            47889999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.25  E-value=3.3e-05  Score=36.26  Aligned_cols=17  Identities=35%  Similarity=0.315  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C   18 (46)
T 2eop_A            2 SSGSSGTGEKPHECREC   18 (46)
T ss_dssp             CCCCSCCCCCSCBCTTT
T ss_pred             CCccccCCCCCeeCCCC
Confidence            47889999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.25  E-value=3.3e-05  Score=36.27  Aligned_cols=17  Identities=35%  Similarity=0.370  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNEC   18 (46)
T ss_dssp             CSSCCCSSCCTTCCTTT
T ss_pred             CCCcCCCCCcCcCCCCC
Confidence            47889999999999987

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.25  E-value=3.1e-05  Score=36.39  Aligned_cols=17  Identities=29%  Similarity=0.327  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDC   18 (46)
T ss_dssp             CCCCCCSSCCSSCCSSS
T ss_pred             ccccCCCCCCCcCCCCC
Confidence            47889999999999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.25  E-value=3.3e-05  Score=36.33  Aligned_cols=17  Identities=24%  Similarity=0.172  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|+|++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNEC   18 (46)
T ss_dssp             CCCSCSSCCCSEECSSS
T ss_pred             CcccccCCCcCeECCCC
Confidence            47889999999999987

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.24  E-value=4e-05  Score=35.98  Aligned_cols=17  Identities=35%  Similarity=0.370  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNEC   18 (46)
T ss_dssp             CCCCCSCCCCCEECTTS
T ss_pred             CccCCCCCCCCeecccc
Confidence            47889999999999988

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.24  E-value=3.9e-05  Score=36.11  Aligned_cols=17  Identities=35%  Similarity=0.231  Sum_probs=15.2

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKC   18 (46)
T ss_dssp             CCCCCCCCSCCEECSSS
T ss_pred             CCccccCCCCCEECcCC
Confidence            37889999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.24  E-value=3.3e-05  Score=36.27  Aligned_cols=17  Identities=18%  Similarity=0.036  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      +|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C   18 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDEC   18 (46)
T ss_dssp             CCCCCCCCCSSEECTTT
T ss_pred             CccccCCCCCCeECCCc
Confidence            47889999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.22  E-value=4.3e-05  Score=35.97  Aligned_cols=17  Identities=24%  Similarity=0.102  Sum_probs=15.2

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2emf_A            2 SSGSSGTGGKHFECTEC   18 (46)
T ss_dssp             CCCSSSSSSCCEECSSS
T ss_pred             ccccccCCCCCeECCCC
Confidence            37889999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=97.22  E-value=4.7e-05  Score=35.83  Aligned_cols=17  Identities=41%  Similarity=0.362  Sum_probs=15.2

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVEC   18 (46)
T ss_dssp             CCCCCCCCCCSBCCSSS
T ss_pred             CCCCCCCCCCCcccCcc
Confidence            37889999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=97.22  E-value=3.6e-05  Score=36.15  Aligned_cols=17  Identities=24%  Similarity=0.169  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|+|++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQC   18 (46)
T ss_dssp             CCCCCSCCCCSEECSSS
T ss_pred             ccccCCCCCCceECCCC
Confidence            47889999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.21  E-value=4e-05  Score=35.65  Aligned_cols=17  Identities=18%  Similarity=0.147  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C   18 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNEC   18 (44)
T ss_dssp             CCCCCCCCCCCEEETTT
T ss_pred             CCCcCCCCCCCeECccc
Confidence            47889999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.21  E-value=5e-05  Score=35.72  Aligned_cols=16  Identities=31%  Similarity=0.372  Sum_probs=14.7

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C   18 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDC   18 (46)
T ss_dssp             CCSCCCCCSSCBCSSS
T ss_pred             CCCCCCCCCCeeCccc
Confidence            6789999999999987

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.21  E-value=5.3e-05  Score=35.53  Aligned_cols=17  Identities=29%  Similarity=0.325  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C   18 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEEC   18 (46)
T ss_dssp             CSSSSSSCCCSEECTTT
T ss_pred             CCCcCcCCCcCccCCCC
Confidence            47889999999999988

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.21  E-value=4.6e-05  Score=35.79  Aligned_cols=17  Identities=35%  Similarity=0.370  Sum_probs=15.2

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNEC   18 (46)
T ss_dssp             CCCCCCSCCCTTCCSSS
T ss_pred             CCCcCCCCCcCeECCCC
Confidence            47789999999999988

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.21  E-value=4.5e-05  Score=35.84  Aligned_cols=17  Identities=29%  Similarity=0.354  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C   18 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVC   18 (46)
T ss_dssp             CCCCCCSSCCSEECSSS
T ss_pred             CCCCCCCCCcCeECCCC
Confidence            47889999999999988

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.21  E-value=4.6e-05  Score=35.75  Aligned_cols=17  Identities=29%  Similarity=0.266  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2yts_A            2 SSGSSGTGEKPYICNEC   18 (46)
T ss_dssp             CCSCCCCSCCSEECSSS
T ss_pred             CCCCCCCCCcCEECCCC
Confidence            47889999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.21  E-value=5.2e-05  Score=35.60  Aligned_cols=16  Identities=38%  Similarity=0.331  Sum_probs=14.8

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C   18 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDC   18 (46)
T ss_dssp             CCSSCCCCCSBCCTTT
T ss_pred             CCCCcCCCCCeECCCC
Confidence            7789999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=97.20  E-value=4.9e-05  Score=35.66  Aligned_cols=17  Identities=29%  Similarity=0.370  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKEC   18 (46)
T ss_dssp             CSCCSCCCCCSEECSSS
T ss_pred             CCCCCCCCCcCeECCcc
Confidence            47889999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.20  E-value=4.8e-05  Score=35.75  Aligned_cols=17  Identities=35%  Similarity=0.370  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNEC   18 (46)
T ss_dssp             CCCSSCCCSSSEECSSS
T ss_pred             CcccCCCCCCCeECCCC
Confidence            47889999999999987

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.20  E-value=4.8e-05  Score=35.67  Aligned_cols=17  Identities=35%  Similarity=0.358  Sum_probs=15.2

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSEC   18 (46)
T ss_dssp             CCCCSSCCCCSEECSSS
T ss_pred             CCCCCCCCCCCcCCCCC
Confidence            47789999999999988

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.20  E-value=5e-05  Score=35.72  Aligned_cols=17  Identities=24%  Similarity=0.231  Sum_probs=15.2

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (47)
T 2epx_A            2 SSGSSGTGKKPYECIEC   18 (47)
T ss_dssp             CCCCCCCCCCSBCCSSS
T ss_pred             ccccccCCCCCEECCcc
Confidence            37889999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.20  E-value=5.7e-05  Score=35.46  Aligned_cols=17  Identities=35%  Similarity=0.389  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|+|++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C   18 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEEC   18 (46)
T ss_dssp             CSTTCCCCCCSEEETTT
T ss_pred             CcccCCCCCCCeeCCCC
Confidence            47889999999999987

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.20  E-value=5.1e-05  Score=35.68  Aligned_cols=17  Identities=24%  Similarity=0.065  Sum_probs=15.2

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVC   18 (46)
T ss_dssp             CCCSCCCCCCCCBCSSS
T ss_pred             CCccccCCCCCeECCCC
Confidence            47789999999999988

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.20  E-value=4.8e-05  Score=35.74  Aligned_cols=17  Identities=35%  Similarity=0.370  Sum_probs=15.2

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNEC   18 (46)
T ss_dssp             CCCCCCCCCSSEECSSS
T ss_pred             CcCcCCCCCCCeECCcC
Confidence            47889999999999987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.20  E-value=4.6e-05  Score=35.75  Aligned_cols=17  Identities=29%  Similarity=0.331  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQC   18 (46)
T ss_dssp             CCCCSSCCCCSSEETTT
T ss_pred             CcccCCCCCCCeECCCC
Confidence            47889999999999988

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.20  E-value=5e-05  Score=35.67  Aligned_cols=17  Identities=29%  Similarity=0.247  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2emg_A            2 SSGSSGTGENPFICSEC   18 (46)
T ss_dssp             CCCCCCCSCCSCBCTTT
T ss_pred             CCCCCCCCCCCEECCcc
Confidence            47889999999999988

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.20  E-value=5e-05  Score=35.32  Aligned_cols=17  Identities=12%  Similarity=0.059  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKC   18 (44)
T ss_dssp             CCCSCCCCCSSEECTTT
T ss_pred             CcccccCCCCCeECCCC
Confidence            47889999999999988

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=97.19  E-value=4.5e-05  Score=35.01  Aligned_cols=16  Identities=19%  Similarity=0.185  Sum_probs=14.6

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |+++|++++||.|.+|
T Consensus         2 H~~~H~~~~~~~C~~C   17 (42)
T 2epc_A            2 SSGSSGGETPYLCGQC   17 (42)
T ss_dssp             CCSCCCSSCCEECSSS
T ss_pred             CCccCCCCCCeECCCC
Confidence            6788999999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.19  E-value=5.5e-05  Score=35.52  Aligned_cols=17  Identities=29%  Similarity=0.282  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSIC   18 (46)
T ss_dssp             CSSSCSSCCCSEECSSS
T ss_pred             CCCCCCCCCcCcCCCCC
Confidence            47889999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.19  E-value=3.5e-05  Score=36.22  Aligned_cols=17  Identities=24%  Similarity=0.290  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2emy_A            2 SSGSSGTGENPYECHEC   18 (46)
T ss_dssp             CCCCCCCSSCCEECSSS
T ss_pred             CCCCCCCCCcCcCCCCC
Confidence            47889999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.19  E-value=5.5e-05  Score=35.51  Aligned_cols=17  Identities=29%  Similarity=0.323  Sum_probs=15.2

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNEC   18 (46)
T ss_dssp             CCCCCCSCCSSCBCTTT
T ss_pred             CCCcCCCCCcCeECCCC
Confidence            47889999999999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.18  E-value=5.1e-05  Score=35.68  Aligned_cols=17  Identities=35%  Similarity=0.434  Sum_probs=15.2

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKEC   18 (46)
T ss_dssp             CCCCSCCCCCSEECSSS
T ss_pred             CCCCCCCCCCCEECCcC
Confidence            37789999999999988

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.18  E-value=4.9e-05  Score=35.64  Aligned_cols=17  Identities=29%  Similarity=0.335  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C   18 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGEC   18 (46)
T ss_dssp             CCCCCCCCCCCEECSSS
T ss_pred             CCccCCCCCCCeECCCC
Confidence            47889999999999988

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.17  E-value=4.1e-05  Score=35.97  Aligned_cols=17  Identities=41%  Similarity=0.382  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C   18 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGEC   18 (46)
T ss_dssp             CCCCCCSSCCSEECTTT
T ss_pred             CCCCCCCCCCCeECCCC
Confidence            47889999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.17  E-value=5.2e-05  Score=35.59  Aligned_cols=17  Identities=41%  Similarity=0.356  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C   18 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDIC   18 (46)
T ss_dssp             CCCCCSSSSCSCCCSSS
T ss_pred             CCCCCCCCCCCcCCCcC
Confidence            47889999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.17  E-value=6.3e-05  Score=35.36  Aligned_cols=17  Identities=24%  Similarity=0.239  Sum_probs=15.1

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSEC   18 (46)
T ss_dssp             CCSSCSSCCCSCBCSSS
T ss_pred             CCCcCcCCCCCcCCCcc
Confidence            37789999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.17  E-value=4.3e-05  Score=35.91  Aligned_cols=17  Identities=29%  Similarity=0.341  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSEC   18 (46)
T ss_dssp             CCCCCSCCCCSEECSSS
T ss_pred             CCccccCCCcCeECCCC
Confidence            47889999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.16  E-value=4.2e-05  Score=35.95  Aligned_cols=17  Identities=29%  Similarity=0.350  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C   18 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNEC   18 (46)
T ss_dssp             CCCCCSSSSCSEECSSS
T ss_pred             CCcccCCCCCCEeCCcC
Confidence            47889999999999987

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.15  E-value=5.8e-05  Score=35.47  Aligned_cols=17  Identities=24%  Similarity=0.129  Sum_probs=15.2

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~h~~~H~~~k~~~C~~C   18 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNEC   18 (46)
T ss_dssp             CCCSSCCSSCCCBCTTT
T ss_pred             CCCCCCCCCCCEECCcc
Confidence            37789999999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.15  E-value=6e-05  Score=35.38  Aligned_cols=17  Identities=35%  Similarity=0.376  Sum_probs=15.2

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHEC   18 (46)
T ss_dssp             CCCCCTTCCCCEECTTT
T ss_pred             CCCcCCCCCCCeECCCC
Confidence            47789999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.15  E-value=6e-05  Score=35.39  Aligned_cols=17  Identities=35%  Similarity=0.389  Sum_probs=15.1

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~h~~~H~~~k~~~C~~C   18 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEEC   18 (46)
T ss_dssp             CCSSCCCCCCSEECSSS
T ss_pred             CCCCCCCCCCCcCCCCC
Confidence            37789999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.15  E-value=5.6e-05  Score=35.43  Aligned_cols=17  Identities=35%  Similarity=0.370  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C   18 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNEC   18 (46)
T ss_dssp             CCSSCCCCCCSSEETTT
T ss_pred             CCCCCCCCCCCeECCCc
Confidence            47889999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.14  E-value=5.8e-05  Score=35.38  Aligned_cols=17  Identities=35%  Similarity=0.245  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTEC   18 (46)
T ss_dssp             CCCCCCCCCCSEECSSS
T ss_pred             cCcccCCCCCCeeCCCC
Confidence            47889999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.14  E-value=6.2e-05  Score=35.32  Aligned_cols=17  Identities=35%  Similarity=0.372  Sum_probs=15.1

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C   18 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEEC   18 (46)
T ss_dssp             CCCCSSSCCCSEECSSS
T ss_pred             CCCCCCCCCcCccCCCc
Confidence            37789999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.14  E-value=5.4e-05  Score=35.54  Aligned_cols=17  Identities=35%  Similarity=0.370  Sum_probs=15.1

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||+|.+|
T Consensus         2 ~H~~~h~~~k~~~C~~C   18 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKC   18 (46)
T ss_dssp             CCCCCCSSCCSEEETTT
T ss_pred             CCCcCCCCCCCeECCCC
Confidence            37789999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.12  E-value=4.8e-05  Score=35.77  Aligned_cols=17  Identities=12%  Similarity=0.032  Sum_probs=15.4

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      +|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C   18 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHEC   18 (46)
T ss_dssp             CCCCCCCCSCSEECSSS
T ss_pred             CCcCCCCCCCCeECCcC
Confidence            47889999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.12  E-value=6.8e-05  Score=35.27  Aligned_cols=16  Identities=38%  Similarity=0.355  Sum_probs=14.7

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C   18 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMEC   18 (46)
T ss_dssp             SCCCCSSCCSSSBTTT
T ss_pred             CCcCCCCCCCcCCCCC
Confidence            6789999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.11  E-value=7e-05  Score=35.14  Aligned_cols=17  Identities=24%  Similarity=0.235  Sum_probs=15.1

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C   18 (46)
T 2yso_A            2 SSGSSGSREKSHQCREC   18 (46)
T ss_dssp             CCSCCSSCCCCEECTTT
T ss_pred             CcccccCCCCCEEcccc
Confidence            37789999999999987

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.10  E-value=7.2e-05  Score=35.14  Aligned_cols=16  Identities=31%  Similarity=0.318  Sum_probs=14.5

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C   18 (46)
T 2enh_A            3 SGSSGTGEKPYECDVC   18 (46)
T ss_dssp             CCCCCCCSSSCBCTTT
T ss_pred             CCCCcCCCCCcCCCCc
Confidence            6788999999999988

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=97.08  E-value=7.8e-05  Score=35.01  Aligned_cols=17  Identities=18%  Similarity=0.169  Sum_probs=15.1

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~h~~~h~~~k~~~C~~C   18 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQC   18 (46)
T ss_dssp             CSCCSSCCCCSEECSSS
T ss_pred             CCCCCCCCCCCeECCCC
Confidence            36789999999999987

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.06  E-value=9.3e-05  Score=32.92  Aligned_cols=14  Identities=7%  Similarity=0.152  Sum_probs=12.8

Q ss_pred             hhhCCCCCcccccC
Q psy9655          83 RSHTKEKPFKVRSL   96 (96)
Q Consensus        83 ~~htgekp~~C~~C   96 (96)
                      ++|++++||.|..|
T Consensus         2 ~~h~~~k~~~C~~C   15 (37)
T 2elo_A            2 SSGSSGRSYSCPVC   15 (37)
T ss_dssp             CCCCCCCCCEETTT
T ss_pred             CCCCCCCCcCCCCC
Confidence            57999999999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.05  E-value=7.1e-05  Score=35.11  Aligned_cols=17  Identities=24%  Similarity=0.266  Sum_probs=15.3

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      .|+++|++++||.|.+|
T Consensus         2 ~h~~~H~~~~~~~C~~C   18 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNEC   18 (46)
T ss_dssp             CCSCCCCSSCCEEETTT
T ss_pred             CCCCccCCCcCeECCCC
Confidence            47889999999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.99  E-value=9.6e-05  Score=34.69  Aligned_cols=16  Identities=31%  Similarity=0.328  Sum_probs=14.7

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C   18 (46)
T 2em8_A            3 SGSSGSGEKPYKCVEC   18 (46)
T ss_dssp             CCCCCCSCCSEECSSS
T ss_pred             CCCCCCCCCCeECccc
Confidence            6789999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.92  E-value=4.4e-05  Score=37.36  Aligned_cols=41  Identities=7%  Similarity=-0.135  Sum_probs=31.3

Q ss_pred             cccCCCCCCCCCCCCCCCcCCC-CCCCCCceecccchhhccC
Q psy9655          34 RENGQNQIVSEPPTDRTVSYNR-PVPPNPSLSCTYCSRAFKK   74 (96)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~C~~C~k~f~~   74 (96)
                      ..........+.....+..|.+ .|.++++|.|.+|++.|.+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           12 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3444555666666667777775 8999999999999999975

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.91  E-value=0.00013  Score=33.85  Aligned_cols=16  Identities=6%  Similarity=-0.078  Sum_probs=14.6

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |+++|++++||.|.+|
T Consensus         3 h~~~h~~~~~~~C~~C   18 (44)
T 2eou_A            3 SGSSGAAKTTSECQEC   18 (44)
T ss_dssp             CSCSCSSSCCCCCTTT
T ss_pred             CCCCCCCCcCeECCCC
Confidence            6788999999999988

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.78  E-value=0.0003  Score=31.17  Aligned_cols=14  Identities=14%  Similarity=0.119  Sum_probs=12.6

Q ss_pred             hhhCCCCCcccccC
Q psy9655          83 RSHTKEKPFKVRSL   96 (96)
Q Consensus        83 ~~htgekp~~C~~C   96 (96)
                      ++|++++||+|..|
T Consensus         2 ~~h~~~k~~~C~~C   15 (37)
T 2elp_A            2 SSGSSGRAMKCPYC   15 (37)
T ss_dssp             CSCCCCCCEECSSS
T ss_pred             CCCCCCCCeECCCC
Confidence            47999999999988

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=96.66  E-value=0.00047  Score=30.06  Aligned_cols=13  Identities=23%  Similarity=0.483  Sum_probs=11.7

Q ss_pred             hhCCCCCcccccC
Q psy9655          84 SHTKEKPFKVRSL   96 (96)
Q Consensus        84 ~htgekp~~C~~C   96 (96)
                      +|+|++||.|.+|
T Consensus         1 ~H~~~k~~~C~~C   13 (35)
T 1srk_A            1 GSSGKRPFVCRIC   13 (35)
T ss_dssp             CCSCCSCEECSSS
T ss_pred             CCCCCcCeeCCCC
Confidence            4899999999988

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=96.59  E-value=0.00056  Score=29.70  Aligned_cols=13  Identities=0%  Similarity=-0.036  Sum_probs=11.7

Q ss_pred             hhCCCCCcccccC
Q psy9655          84 SHTKEKPFKVRSL   96 (96)
Q Consensus        84 ~htgekp~~C~~C   96 (96)
                      +|+|++||.|.+|
T Consensus         1 ~h~~~k~~~C~~C   13 (35)
T 2elx_A            1 GSSGSSGYVCALC   13 (35)
T ss_dssp             CCCCCCSEECSSS
T ss_pred             CCCCCCCeECCCC
Confidence            4889999999988

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.57  E-value=0.00054  Score=30.10  Aligned_cols=14  Identities=36%  Similarity=0.444  Sum_probs=12.4

Q ss_pred             hhhCCCCCcccccC
Q psy9655          83 RSHTKEKPFKVRSL   96 (96)
Q Consensus        83 ~~htgekp~~C~~C   96 (96)
                      +.|++++||+|.+|
T Consensus         2 ~~h~~~k~~~C~~C   15 (36)
T 2elq_A            2 SSGSSGKPFKCSLC   15 (36)
T ss_dssp             CSSCCCCSEECSSS
T ss_pred             CCCCCCCCccCCCC
Confidence            36899999999988

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.55  E-value=0.00042  Score=36.39  Aligned_cols=53  Identities=15%  Similarity=0.062  Sum_probs=37.4

Q ss_pred             cccCCCCCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          34 RENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ..........+. ......|. .+.+.+++.|..|++.|. ...|..|+++|++++
T Consensus        17 ~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           17 LAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             ccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            333333433332 33344455 677889999999999987 599999999999875

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.52  E-value=0.00032  Score=32.60  Aligned_cols=16  Identities=31%  Similarity=0.337  Sum_probs=13.8

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      +.++|++++||+|.+|
T Consensus         3 ~~~~h~~~k~~~C~~C   18 (45)
T 2epu_A            3 SGSSGTGQKPFECTHC   18 (45)
T ss_dssp             CCCCCCSCCSEEETTT
T ss_pred             CCCCCCCCcCccCCCC
Confidence            3567999999999988

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=96.52  E-value=3.1e-05  Score=39.12  Aligned_cols=26  Identities=15%  Similarity=0.372  Sum_probs=22.3

Q ss_pred             CCCCCCCceecccchhhccCCchHHH
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTR   80 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~   80 (96)
                      ..|+++++|.|..|++.|....++..
T Consensus        32 ~~H~~~k~~~C~~C~k~f~~~~~~~~   57 (62)
T 1vd4_A           32 LFDPMTGTFRCTFCHTEVEEDESAMP   57 (62)
T ss_dssp             HEETTTTEEBCSSSCCBCEECTTCSC
T ss_pred             hhcCCCCCEECCCCCCccccCccccc
Confidence            57888999999999999998876654

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.49  E-value=0.0004  Score=32.47  Aligned_cols=15  Identities=13%  Similarity=0.020  Sum_probs=13.5

Q ss_pred             HhhhCCCCCcccccC
Q psy9655          82 IRSHTKEKPFKVRSL   96 (96)
Q Consensus        82 ~~~htgekp~~C~~C   96 (96)
                      +++|++++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C   18 (46)
T 2eom_A            4 GSSGHGERGHRCSDC   18 (46)
T ss_dssp             CCCCCCCSSCCCSSS
T ss_pred             CCCCCCCCCcCCCCC
Confidence            568999999999988

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.45  E-value=0.00069  Score=30.70  Aligned_cols=14  Identities=0%  Similarity=0.228  Sum_probs=12.6

Q ss_pred             hhhCCCCCcccccC
Q psy9655          83 RSHTKEKPFKVRSL   96 (96)
Q Consensus        83 ~~htgekp~~C~~C   96 (96)
                      ++|++++||.|.+|
T Consensus         3 ~~h~~~k~~~C~~C   16 (41)
T 2ept_A            3 SGSSGQRVYECQEC   16 (41)
T ss_dssp             SSCCCCCCEECSSS
T ss_pred             CccCCCCCeECCCC
Confidence            57999999999988

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.41  E-value=0.00047  Score=32.12  Aligned_cols=16  Identities=38%  Similarity=0.360  Sum_probs=13.9

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      ++++|++++||.|.+|
T Consensus         3 ~~~~h~~~~~~~C~~C   18 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVC   18 (46)
T ss_dssp             CCCSSTTCCSEECSSS
T ss_pred             CCCCCCCCCCeeCccc
Confidence            3568999999999987

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.33  E-value=0.001  Score=29.07  Aligned_cols=13  Identities=31%  Similarity=0.475  Sum_probs=11.9

Q ss_pred             hhCCCCCcccccC
Q psy9655          84 SHTKEKPFKVRSL   96 (96)
Q Consensus        84 ~htgekp~~C~~C   96 (96)
                      +|++++||+|.+|
T Consensus         3 ~h~~~k~~~C~~C   15 (36)
T 2elt_A            3 SGSSGKPYKCPQC   15 (36)
T ss_dssp             CSCCCCSEECSSS
T ss_pred             CCCCCCCCCCCCC
Confidence            5899999999988

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.30  E-value=0.00094  Score=29.26  Aligned_cols=14  Identities=7%  Similarity=0.000  Sum_probs=12.2

Q ss_pred             hhhCCCCCcccccC
Q psy9655          83 RSHTKEKPFKVRSL   96 (96)
Q Consensus        83 ~~htgekp~~C~~C   96 (96)
                      +.|++++||+|.+|
T Consensus         2 ~~h~~~k~~~C~~C   15 (36)
T 2elv_A            2 SSGSSGLLYDCHIC   15 (36)
T ss_dssp             CCSCCCCCEECSSS
T ss_pred             CCCCCCCCeECCCC
Confidence            36899999999988

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.24  E-value=0.00092  Score=31.11  Aligned_cols=15  Identities=27%  Similarity=0.321  Sum_probs=13.4

Q ss_pred             HhhhCCCCCcccccC
Q psy9655          82 IRSHTKEKPFKVRSL   96 (96)
Q Consensus        82 ~~~htgekp~~C~~C   96 (96)
                      +++|++++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C   18 (46)
T 2ytt_A            4 GSSGEGEKPYQCSEC   18 (46)
T ss_dssp             SSSCSCCCTTCCSSS
T ss_pred             CCCCCCCCCeeCCCC
Confidence            568999999999987

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=96.13  E-value=0.0016  Score=29.52  Aligned_cols=12  Identities=17%  Similarity=0.016  Sum_probs=10.9

Q ss_pred             hCCCCCcccccC
Q psy9655          85 HTKEKPFKVRSL   96 (96)
Q Consensus        85 htgekp~~C~~C   96 (96)
                      ++|||||+|..|
T Consensus         3 ~~gekp~~C~~C   14 (36)
T 1fv5_A            3 LLKPARFMCLPC   14 (36)
T ss_dssp             SSSCCCCEETTT
T ss_pred             CCCccCeECCCC
Confidence            679999999988

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.11  E-value=0.0014  Score=30.09  Aligned_cols=14  Identities=7%  Similarity=0.078  Sum_probs=12.6

Q ss_pred             hhhCCCCCcccccC
Q psy9655          83 RSHTKEKPFKVRSL   96 (96)
Q Consensus        83 ~~htgekp~~C~~C   96 (96)
                      ++|++++||.|..|
T Consensus         3 ~~h~~~k~~~C~~C   16 (43)
T 2yrm_A            3 SGSSGNGAFFCNEC   16 (43)
T ss_dssp             SCCSSSCCBCCSSS
T ss_pred             cCcCCCCCEECCCC
Confidence            47999999999987

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.06  E-value=0.00066  Score=32.01  Aligned_cols=20  Identities=10%  Similarity=0.089  Sum_probs=15.4

Q ss_pred             hHHHHHhhhCCCCCcccc--cC
Q psy9655          77 DLTRHIRSHTKEKPFKVR--SL   96 (96)
Q Consensus        77 ~l~~h~~~htgekp~~C~--~C   96 (96)
                      .+..|...|+|++||.|.  .|
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C   26 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGC   26 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTC
T ss_pred             HHHHHHhccCCCCCeECCCCCC
Confidence            345566779999999996  57

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=95.80  E-value=0.0044  Score=31.60  Aligned_cols=32  Identities=28%  Similarity=0.722  Sum_probs=24.1

Q ss_pred             eeccc--chhhccCCchHHHHH-hhhCCCC------Ccccc
Q psy9655          63 LSCTY--CSRAFKKRSDLTRHI-RSHTKEK------PFKVR   94 (96)
Q Consensus        63 ~~C~~--C~k~f~~~~~l~~h~-~~htgek------p~~C~   94 (96)
                      +.|..  |++.|.....|..|+ ..|.|.+      +|.|.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~   42 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACN   42 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEee
Confidence            44554  888888888888887 5787766      78885

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.74  E-value=0.00039  Score=32.87  Aligned_cols=36  Identities=6%  Similarity=-0.306  Sum_probs=27.8

Q ss_pred             ccCCCCCCCCCCCCCCCcCCCCCCCCCceecccchh
Q psy9655          35 ENGQNQIVSEPPTDRTVSYNRPVPPNPSLSCTYCSR   70 (96)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k   70 (96)
                      .........+.....+..|.+.|.++++|.|.+|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           13 VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             eeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            334445566666677778888999999999999986

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.68  E-value=0.0017  Score=30.25  Aligned_cols=16  Identities=38%  Similarity=0.355  Sum_probs=13.6

Q ss_pred             HHhhhCCCCCcccc--cC
Q psy9655          81 HIRSHTKEKPFKVR--SL   96 (96)
Q Consensus        81 h~~~htgekp~~C~--~C   96 (96)
                      |.++|++++||.|.  .|
T Consensus         3 ~~~~H~~~k~~~C~~~~C   20 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGC   20 (48)
T ss_dssp             CCCSSCCCCCEECCSSSC
T ss_pred             CCCCcCCCCCeECCCCCC
Confidence            45789999999997  66

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.63  E-value=0.0029  Score=29.17  Aligned_cols=14  Identities=21%  Similarity=0.396  Sum_probs=12.3

Q ss_pred             hhhCCCCCcccccC
Q psy9655          83 RSHTKEKPFKVRSL   96 (96)
Q Consensus        83 ~~htgekp~~C~~C   96 (96)
                      .+|++++||.|.+|
T Consensus         3 ~~h~~~k~~~C~~C   16 (45)
T 2epq_A            3 SGSSGEKPYSCPVC   16 (45)
T ss_dssp             CCCSSCCSSEETTT
T ss_pred             CCcCCCCCCcCCCC
Confidence            36899999999987

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.57  E-value=0.0062  Score=29.26  Aligned_cols=27  Identities=19%  Similarity=0.349  Sum_probs=23.1

Q ss_pred             CceecccchhhccCCchHHHHHhhhCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTK   87 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htg   87 (96)
                      -.|.|+.|+..|.....|+.||+---+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCc
Confidence            358999999999999999999985443

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=94.80  E-value=0.0046  Score=33.38  Aligned_cols=18  Identities=0%  Similarity=0.038  Sum_probs=15.1

Q ss_pred             HHHHhhhCCCCCcccccC
Q psy9655          79 TRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        79 ~~h~~~htgekp~~C~~C   96 (96)
                      ..|.++|++++||.|.+|
T Consensus        14 ~~~~~~H~~~kpy~C~~C   31 (88)
T 1x6f_A           14 ILGNGPRLQNSTYQCKHC   31 (88)
T ss_dssp             CCCCCSCCCCSCEECSSS
T ss_pred             eccccccCCCCCCcCCCC
Confidence            345678999999999988

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=94.18  E-value=0.022  Score=30.91  Aligned_cols=28  Identities=32%  Similarity=0.708  Sum_probs=23.2

Q ss_pred             ceecccchhhccCCchHHHHHhhhCCCCCcc
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSHTKEKPFK   92 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~htgekp~~   92 (96)
                      ...|..||+.|.   .|++|+++|.|..|..
T Consensus        21 ~iiClecGK~fK---~LkRHL~~~hgltpee   48 (87)
T 2jsp_A           21 HIVCLECGGSFK---SLKRHLTTHHSMTPEE   48 (87)
T ss_dssp             CEECTBTCCEES---BHHHHHHHTTCSCHHH
T ss_pred             ceEecccchhhH---HHHHHHHHccCCCHHH
Confidence            478999999998   5889999977877643

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=93.75  E-value=0.021  Score=29.92  Aligned_cols=13  Identities=8%  Similarity=0.263  Sum_probs=10.8

Q ss_pred             hhCCCCCccccc--C
Q psy9655          84 SHTKEKPFKVRS--L   96 (96)
Q Consensus        84 ~htgekp~~C~~--C   96 (96)
                      .++|+|||+|.+  |
T Consensus        21 ~~sGEKPYkC~~~~C   35 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGC   35 (73)
T ss_dssp             SSCSSCSCBCCSTTC
T ss_pred             cccCCCCeECCCCCc
Confidence            368999999975  7

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=89.41  E-value=0.13  Score=28.81  Aligned_cols=25  Identities=20%  Similarity=0.374  Sum_probs=17.8

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      .+|.|..||+.|.           -.-.+|-.|+.|
T Consensus        66 ~p~~C~~CG~~F~-----------~~~~kPsrCP~C   90 (105)
T 2gmg_A           66 KPAQCRKCGFVFK-----------AEINIPSRCPKC   90 (105)
T ss_dssp             CCCBBTTTCCBCC-----------CCSSCCSSCSSS
T ss_pred             ECcChhhCcCeec-----------ccCCCCCCCcCC
Confidence            4689999999992           122467778776

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=88.87  E-value=0.39  Score=21.55  Aligned_cols=27  Identities=15%  Similarity=0.188  Sum_probs=22.3

Q ss_pred             CCceecccchhhccCCchHHHHHhhhC
Q psy9655          60 NPSLSCTYCSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        60 ~~~~~C~~C~k~f~~~~~l~~h~~~ht   86 (96)
                      ...+.|..|+-.|..-..+..|.+.--
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~YC   32 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQFYC   32 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHHTS
T ss_pred             cCcCeeccccceehhhHHHhhhheecC
Confidence            345899999999999999999976543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=88.44  E-value=0.16  Score=22.61  Aligned_cols=26  Identities=19%  Similarity=0.549  Sum_probs=22.1

Q ss_pred             ceecccchhhccCCchHHHHHh-hhCC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIR-SHTK   87 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~-~htg   87 (96)
                      .|.|+.|-+.|.....|..|.. .|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            4999999999999999999974 4653

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=88.08  E-value=0.3  Score=28.04  Aligned_cols=22  Identities=23%  Similarity=0.430  Sum_probs=19.4

Q ss_pred             CceecccchhhccCCchHHHHH
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHI   82 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~   82 (96)
                      +++.|..|...|...+.+..|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHY   52 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHH
Confidence            4589999999999988888887

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=87.41  E-value=0.21  Score=31.08  Aligned_cols=23  Identities=22%  Similarity=0.150  Sum_probs=18.7

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ..|.|..||..+.             |+.|..|+.|
T Consensus       170 ~~~~C~~CG~i~~-------------g~~p~~CP~C  192 (202)
T 1yuz_A          170 KFHLCPICGYIHK-------------GEDFEKCPIC  192 (202)
T ss_dssp             CEEECSSSCCEEE-------------SSCCSBCTTT
T ss_pred             cEEEECCCCCEEc-------------CcCCCCCCCC
Confidence            4599999999864             3578999988

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=82.85  E-value=0.54  Score=28.42  Aligned_cols=23  Identities=17%  Similarity=0.235  Sum_probs=18.5

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      ..|.|..||..+.             ++-|-.|+.|
T Consensus       137 ~~~~C~~CG~i~~-------------~~~p~~CP~C  159 (170)
T 3pwf_A          137 KVYICPICGYTAV-------------DEAPEYCPVC  159 (170)
T ss_dssp             CEEECTTTCCEEE-------------SCCCSBCTTT
T ss_pred             CeeEeCCCCCeeC-------------CCCCCCCCCC
Confidence            4599999999874             3567799988

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=82.83  E-value=0.49  Score=27.11  Aligned_cols=28  Identities=18%  Similarity=0.269  Sum_probs=23.7

Q ss_pred             CCCCCCceecccchhhccCCchHHHHHh
Q psy9655          56 PVPPNPSLSCTYCSRAFKKRSDLTRHIR   83 (96)
Q Consensus        56 ~~~~~~~~~C~~C~k~f~~~~~l~~h~~   83 (96)
                      .+.+...|.|..|+..|.....+..|..
T Consensus        87 ~~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           87 SDGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             SSCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             ccCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            3456677999999999999999999974

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=81.17  E-value=0.66  Score=22.76  Aligned_cols=21  Identities=29%  Similarity=0.610  Sum_probs=19.0

Q ss_pred             eecccchhhccCCchHHHHHh
Q psy9655          63 LSCTYCSRAFKKRSDLTRHIR   83 (96)
Q Consensus        63 ~~C~~C~k~f~~~~~l~~h~~   83 (96)
                      -.|..|+..|..+..++.|+-
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            489999999999999999974

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	96
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-08
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-07
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-06
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	3e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-04
d1bboa1	28	g.37.1.1 (A:1-28) Enhancer binding protein {Human	3e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	4e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	5e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	6e-04
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	6e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.001
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.001
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.004
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.004

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (104), Expect = 2e-08
 Identities = 5/29 (17%), Positives = 13/29 (44%)

Query: 64 SCTYCSRAFKKRSDLTRHIRSHTKEKPFK 92
              C ++F  +  L  H++ H+  + + 
Sbjct: 5  PEPACGKSFNFKKHLKEHMKLHSDTRDYI 33

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (102), Expect = 4e-08
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 65 CTYCSRAFKKRSDLTRHIRS-HTKEKPFK 92
          C  C + F +   L  HI+  HT E+P K
Sbjct: 8  CQSCGKGFSRPDHLNGHIKQVHTSERPHK 36

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 41.1 bits (97), Expect = 2e-07
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEK 89
          C  C+RAF ++  L RH RSHT EK
Sbjct: 5  CEVCTRAFARQEHLKRHYRSHTNEK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 3e-06
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEK 89
          C  C + F +   L++HI++H  +K
Sbjct: 5  CPECPKRFMRSDHLSKHIKTHQNKK 29

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (88), Expect = 5e-06
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKE 88
          C  C +AF + S L +H R HT E
Sbjct: 10 CVECGKAFSRSSILVQHQRVHTGE 33

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 1e-05
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 65 CTY--CSRAFKKRSDLTRHIRSHTKEK 89
          CT+  C + F +  +L RH R+HT EK
Sbjct: 5  CTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.3 bits (82), Expect = 3e-05
 Identities = 11/22 (50%), Positives = 13/22 (59%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHT 86
          C  C R F +   LT HIR+HT
Sbjct: 6  CRICMRNFSRSDHLTTHIRTHT 27

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 9e-05
 Identities = 5/25 (20%), Positives = 13/25 (52%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEK 89
          C++C + F+++  L  H + +    
Sbjct: 11 CSHCDKTFRQKQLLDMHFKRYHDPN 35

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 1e-04
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 2/26 (7%)

Query: 65 CTY--CSRAFKKRSDLTRHIRSHTKE 88
          CT+  C +++ +  +L  H+RSHT E
Sbjct: 5  CTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.8 bits (78), Expect = 2e-04
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 68 CSRAFKKRSDLTRHIRSHTKE 88
          C +AF +  DL RH +SH ++
Sbjct: 11 CDKAFVRNHDLIRHKKSHQEK 31

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (75), Expect = 3e-04
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKEK 89
          C  C    KK S L +HIR+HT  +
Sbjct: 4  CEECGIRAKKPSMLKKHIRTHTDVR 28

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (75), Expect = 4e-04
 Identities = 7/31 (22%), Positives = 11/31 (35%)

Query: 55 RPVPPNPSLSCTYCSRAFKKRSDLTRHIRSH 85
                    C  C + FK +  L  H++ H
Sbjct: 23 SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.7 bits (75), Expect = 5e-04
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 2/24 (8%)

Query: 65 CTY--CSRAFKKRSDLTRHIRSHT 86
          C    C R F + +DLTRHIR HT
Sbjct: 5  CPVESCDRRFSRSADLTRHIRIHT 28

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.2 bits (74), Expect = 6e-04
 Identities = 10/22 (45%), Positives = 12/22 (54%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHT 86
          C  C +AF + S L  H R HT
Sbjct: 5  CLECGKAFSQNSGLINHQRIHT 26

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 6e-04
 Identities = 7/24 (29%), Positives = 14/24 (58%), Gaps = 2/24 (8%)

Query: 65 CTY--CSRAFKKRSDLTRHIRSHT 86
          C +  C++ F + ++L  HI +H 
Sbjct: 5  CPFDGCNKKFAQSTNLKSHILTHA 28

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 7e-04
 Identities = 7/25 (28%), Positives = 11/25 (44%), Gaps = 1/25 (4%)

Query: 65 CTYCSRAFKKRSDLTRHI-RSHTKE 88
          C  C   F +   +  HI + HT+ 
Sbjct: 11 CYICHARFTQSGTMKMHILQKHTEN 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.7 bits (72), Expect = 0.001
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKE 88
          C  C ++F   SDL++H R+HT E
Sbjct: 15 CDECGKSFSHSSDLSKHRRTHTGE 38

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.2 bits (71), Expect = 0.001
 Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 2/26 (7%)

Query: 65 CTY--CSRAFKKRSDLTRHIRSHTKE 88
          CT+  C + F    +L  H+R HT +
Sbjct: 5  CTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 30.7 bits (69), Expect = 0.004
 Identities = 7/26 (26%), Positives = 17/26 (65%)

Query: 64 SCTYCSRAFKKRSDLTRHIRSHTKEK 89
              C++ FK+R ++  HI++H +++
Sbjct: 22 LFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 30.1 bits (68), Expect = 0.004
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 65 CTYCSRAFKKRSDLTRHIRSHTKE 88
          C  C  AF  +++  RH++ HT  
Sbjct: 10 CRICLSAFTTKANCARHLKVHTDT 33

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	96
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.65
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.53
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.51
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.5
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.49
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.47
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.45
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.39
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.38
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.37
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.34
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.31
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.25
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.25
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.24
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.23
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.18
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.01
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.98
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.95
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.92
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.82
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.76
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.68
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.56
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.54
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.46
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.45
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.42
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.42
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.32
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.18
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.14
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.12
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.99
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.98
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.98
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	97.9
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.83
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.78
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.75
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.74
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.74
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.7
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.5
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.38
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.36
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.3
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.24
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.85
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.77
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.55
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.46
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.3
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.28
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.04
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.0
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.64
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.49
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.85
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	93.58
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	93.5
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.12
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	93.11
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	93.02
d1y0jb1	36	U-shaped transcription factor, different fingers {	91.66
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.02
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	90.93
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	89.54
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	86.54
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	86.46
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	82.83

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.1e-17  Score=77.09  Aligned_cols=37  Identities=30%  Similarity=0.653  Sum_probs=34.0

Q ss_pred             CCCceecccchhhccCCchHHHHHh-hhCCCCCccccc
Q psy9655          59 PNPSLSCTYCSRAFKKRSDLTRHIR-SHTKEKPFKVRS   95 (96)
Q Consensus        59 ~~~~~~C~~C~k~f~~~~~l~~h~~-~htgekp~~C~~   95 (96)
                      .++||.|..||+.|.+.++|+.|++ +|+|||||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            3688999999999999999999975 799999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=2e-15  Score=70.13  Aligned_cols=37  Identities=30%  Similarity=0.553  Sum_probs=35.3

Q ss_pred             cCCCCCCCCCceecccchhhccCCchHHHHHhhhCCC
Q psy9655          52 SYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        52 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htge   88 (96)
                      .++..|++++||.|.+|||+|.+.++|..|+++||||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4678999999999999999999999999999999997

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.8e-15  Score=69.28  Aligned_cols=33  Identities=21%  Similarity=0.612  Sum_probs=31.2

Q ss_pred             eeccc--chhhccCCchHHHHHhhhCCCCCccccc
Q psy9655          63 LSCTY--CSRAFKKRSDLTRHIRSHTKEKPFKVRS   95 (96)
Q Consensus        63 ~~C~~--C~k~f~~~~~l~~h~~~htgekp~~C~~   95 (96)
                      |.|..  |++.|.++++|++|+++|+|+|||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            78987  9999999999999999999999999974

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=4.1e-15  Score=66.74  Aligned_cols=33  Identities=33%  Similarity=0.540  Sum_probs=31.6

Q ss_pred             CCCCCCceecccchhhccCCchHHHHHhhhCCC
Q psy9655          56 PVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        56 ~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htge   88 (96)
                      .|++++||.|..|+++|.+.++|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            489999999999999999999999999999997

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=4.5e-15  Score=73.76  Aligned_cols=36  Identities=22%  Similarity=0.555  Sum_probs=34.1

Q ss_pred             CCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          60 NPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        60 ~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +++|.| .||+.|.....|..|+++|+|++||.|.+|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C   36 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVC   36 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCc
Confidence            478999 599999999999999999999999999998

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.47  E-value=5.7e-15  Score=64.50  Aligned_cols=29  Identities=52%  Similarity=0.933  Sum_probs=27.9

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      +||.|.+|++.|.+.++|+.|+++|||||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            58999999999999999999999999997

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.4e-14  Score=63.14  Aligned_cols=29  Identities=28%  Similarity=0.783  Sum_probs=27.8

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ++|.|.+|++.|.++++|..|+++|||||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57999999999999999999999999996

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1e-13  Score=63.44  Aligned_cols=35  Identities=17%  Similarity=0.471  Sum_probs=32.7

Q ss_pred             CCCCCCCceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      ++|++++||.|..|+++|.+.++|..|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            57999999999999999999999999999998763

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.38  E-value=9.7e-14  Score=62.91  Aligned_cols=33  Identities=24%  Similarity=0.562  Sum_probs=31.1

Q ss_pred             CCCCCceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          57 VPPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        57 ~~~~~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      |+|++||.|.+|++.|.++++|+.|+++|+++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            689999999999999999999999999999764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.37  E-value=5.1e-14  Score=60.78  Aligned_cols=28  Identities=39%  Similarity=0.812  Sum_probs=26.8

Q ss_pred             CCceecccchhhccCCchHHHHHhhhCC
Q psy9655          60 NPSLSCTYCSRAFKKRSDLTRHIRSHTK   87 (96)
Q Consensus        60 ~~~~~C~~C~k~f~~~~~l~~h~~~htg   87 (96)
                      +|||.|.+|++.|.++++|..|+++|||
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5789999999999999999999999997

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.34  E-value=2.9e-13  Score=62.22  Aligned_cols=35  Identities=23%  Similarity=0.451  Sum_probs=33.1

Q ss_pred             CCCCCCCCCceecccchhhccCCchHHHHHhhhCC
Q psy9655          53 YNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSHTK   87 (96)
Q Consensus        53 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~htg   87 (96)
                      +.+.|++++||.|..|++.|.++++|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            57899999999999999999999999999999975

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.31  E-value=3.5e-13  Score=64.98  Aligned_cols=34  Identities=26%  Similarity=0.825  Sum_probs=32.3

Q ss_pred             CCCCCCceeccc--chhhccCCchHHHHHhhhCCCC
Q psy9655          56 PVPPNPSLSCTY--CSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        56 ~~~~~~~~~C~~--C~k~f~~~~~l~~h~~~htgek   89 (96)
                      .|.++++|.|.+  |++.|.+.++|+.|+++|||||
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            489999999987  9999999999999999999996

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=8.4e-13  Score=57.73  Aligned_cols=28  Identities=36%  Similarity=0.844  Sum_probs=26.7

Q ss_pred             Cceeccc--chhhccCCchHHHHHhhhCCC
Q psy9655          61 PSLSCTY--CSRAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        61 ~~~~C~~--C~k~f~~~~~l~~h~~~htge   88 (96)
                      |||.|.+  |++.|.+.++|+.|+++||||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5799999  999999999999999999997

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=7.6e-13  Score=57.94  Aligned_cols=28  Identities=32%  Similarity=0.772  Sum_probs=26.6

Q ss_pred             Cceeccc--chhhccCCchHHHHHhhhCCC
Q psy9655          61 PSLSCTY--CSRAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        61 ~~~~C~~--C~k~f~~~~~l~~h~~~htge   88 (96)
                      |||.|.+  |++.|.+.++|+.|+|+||||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5899988  999999999999999999997

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1e-12  Score=57.96  Aligned_cols=29  Identities=41%  Similarity=0.896  Sum_probs=26.9

Q ss_pred             Cceeccc--chhhccCCchHHHHHhhhCCCC
Q psy9655          61 PSLSCTY--CSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        61 ~~~~C~~--C~k~f~~~~~l~~h~~~htgek   89 (96)
                      +||.|.+  |++.|.+.++|+.|+++|||||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            5799965  9999999999999999999996

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=9.5e-13  Score=55.50  Aligned_cols=26  Identities=38%  Similarity=0.703  Sum_probs=24.9

Q ss_pred             CceecccchhhccCCchHHHHHhhhC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~ht   86 (96)
                      |||.|..|||+|.+.++|..|+|+||
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58999999999999999999999996

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=5.9e-12  Score=57.35  Aligned_cols=34  Identities=24%  Similarity=0.491  Sum_probs=29.9

Q ss_pred             CCCCCCCceecccchhhccCCchHHHHHh-hhCCC
Q psy9655          55 RPVPPNPSLSCTYCSRAFKKRSDLTRHIR-SHTKE   88 (96)
Q Consensus        55 ~~~~~~~~~~C~~C~k~f~~~~~l~~h~~-~htge   88 (96)
                      ++|+|++||.|..|++.|.++++|+.|++ .|+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            47999999999999999999999999975 56543

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.01  E-value=2.7e-11  Score=52.39  Aligned_cols=27  Identities=48%  Similarity=0.914  Sum_probs=25.6

Q ss_pred             Cceeccc--chhhccCCchHHHHHhhhCC
Q psy9655          61 PSLSCTY--CSRAFKKRSDLTRHIRSHTK   87 (96)
Q Consensus        61 ~~~~C~~--C~k~f~~~~~l~~h~~~htg   87 (96)
                      |||.|.+  |++.|.+.++|+.|+++|||
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5899988  99999999999999999997

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.3e-10  Score=50.18  Aligned_cols=33  Identities=33%  Similarity=0.738  Sum_probs=30.4

Q ss_pred             CCceecccchhhccCCchHHHHHhhhCCCCCcc
Q psy9655          60 NPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFK   92 (96)
Q Consensus        60 ~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~   92 (96)
                      ++...|..||+.|....+|.+|...|+|||||.
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            456899999999999999999999999999984

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.95  E-value=2.3e-10  Score=50.49  Aligned_cols=29  Identities=38%  Similarity=0.786  Sum_probs=26.7

Q ss_pred             CCceeccc--chhhccCCchHHHHHhhhCCC
Q psy9655          60 NPSLSCTY--CSRAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        60 ~~~~~C~~--C~k~f~~~~~l~~h~~~htge   88 (96)
                      ++||.|.+  |++.|.+.++|++|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            47899998  999999999999999999864

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=1.6e-10  Score=49.42  Aligned_cols=26  Identities=27%  Similarity=0.786  Sum_probs=24.6

Q ss_pred             Cceeccc--chhhccCCchHHHHHhhhC
Q psy9655          61 PSLSCTY--CSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        61 ~~~~C~~--C~k~f~~~~~l~~h~~~ht   86 (96)
                      +||.|.+  |+|.|.+.++|++|+++||
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5799998  9999999999999999997

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=4e-11  Score=59.05  Aligned_cols=46  Identities=17%  Similarity=0.184  Sum_probs=39.8

Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCceecccchhhccCCchHHHHHhhh
Q psy9655          40 QIVSEPPTDRTVSYNRPVPPNPSLSCTYCSRAFKKRSDLTRHIRSH   85 (96)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~l~~h~~~h   85 (96)
                      ....+........+++.|+++++|.|..|++.|...+.|..|+++|
T Consensus         8 Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4555566666777888999999999999999999999999999987

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=9.5e-10  Score=44.38  Aligned_cols=26  Identities=31%  Similarity=0.796  Sum_probs=24.3

Q ss_pred             ceecccchhhccCCchHHHHHhhhCC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSHTK   87 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~htg   87 (96)
                      |+.|..|++.|+++..|+.|+|.|||
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46799999999999999999999997

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=3.9e-09  Score=43.32  Aligned_cols=27  Identities=41%  Similarity=0.645  Sum_probs=25.3

Q ss_pred             ceecccchhhccCCchHHHHHhhhCCC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~htge   88 (96)
                      .+.|..|||.|...+.|++|+.+||||
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            478999999999999999999999996

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.56  E-value=4.6e-09  Score=47.76  Aligned_cols=16  Identities=31%  Similarity=0.422  Sum_probs=15.1

Q ss_pred             HHhhhCCCCCcccccC
Q psy9655          81 HIRSHTKEKPFKVRSL   96 (96)
Q Consensus        81 h~~~htgekp~~C~~C   96 (96)
                      |.|+|||||||+|.+|
T Consensus         2 h~R~HTgeKPy~C~~C   17 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDC   17 (37)
T ss_dssp             CSSTTCCSSSBCCTTT
T ss_pred             CCCccCCccCeEeCCC
Confidence            7899999999999998

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.54  E-value=1.3e-08  Score=41.23  Aligned_cols=26  Identities=38%  Similarity=0.652  Sum_probs=24.8

Q ss_pred             ecccchhhccCCchHHHHHhhhCCCC
Q psy9655          64 SCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        64 ~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      +|+.|.+.|..+..|+.|.|.|+|||
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999986

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=3.2e-08  Score=40.90  Aligned_cols=27  Identities=41%  Similarity=0.630  Sum_probs=25.8

Q ss_pred             eecccchhhccCCchHHHHHhhhCCCC
Q psy9655          63 LSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        63 ~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      |.|..|+.....++-|+.|+|.||+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            899999999999999999999999986

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=3.7e-08  Score=40.57  Aligned_cols=29  Identities=38%  Similarity=0.686  Sum_probs=26.9

Q ss_pred             CCceecccchhhccCCchHHHHHhhhCCC
Q psy9655          60 NPSLSCTYCSRAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        60 ~~~~~C~~C~k~f~~~~~l~~h~~~htge   88 (96)
                      ++||.|..|.+.-...+.|..|+|.|||.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            47899999999999999999999999985

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.42  E-value=4.8e-08  Score=40.44  Aligned_cols=27  Identities=26%  Similarity=0.700  Sum_probs=25.1

Q ss_pred             CCceecccchhhccCCchHHHHHhhhC
Q psy9655          60 NPSLSCTYCSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        60 ~~~~~C~~C~k~f~~~~~l~~h~~~ht   86 (96)
                      ++||.|.+||+.|.+....++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            478999999999999999999999985

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=2.1e-08  Score=45.20  Aligned_cols=14  Identities=36%  Similarity=0.672  Sum_probs=13.1

Q ss_pred             hhhCCCCCcccccC
Q psy9655          83 RSHTKEKPFKVRSL   96 (96)
Q Consensus        83 ~~htgekp~~C~~C   96 (96)
                      |+|||||||+|++|
T Consensus         1 R~HTgekP~~C~~C   14 (36)
T d2ct1a2           1 RTHSGEKPYECYIC   14 (36)
T ss_dssp             CCCSCCCSEECTTT
T ss_pred             CccCCCCCEeCCCC
Confidence            58999999999998

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=5.9e-08  Score=43.68  Aligned_cols=14  Identities=43%  Similarity=0.733  Sum_probs=13.1

Q ss_pred             hhhCCCCCcccccC
Q psy9655          83 RSHTKEKPFKVRSL   96 (96)
Q Consensus        83 ~~htgekp~~C~~C   96 (96)
                      |+|||||||+|.+|
T Consensus         1 R~HTgekPy~C~~C   14 (36)
T d1x6ha2           1 RTHTGEKPYACSHC   14 (36)
T ss_dssp             TTCCCCCCEECSSS
T ss_pred             CCCCCCCCEECCCC
Confidence            68999999999998

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=7.6e-08  Score=43.81  Aligned_cols=17  Identities=12%  Similarity=0.227  Sum_probs=15.7

Q ss_pred             HHHhhhCCCCCcccccC
Q psy9655          80 RHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        80 ~h~~~htgekp~~C~~C   96 (96)
                      +|+++|+++|||+|..|
T Consensus         2 rH~~~Ht~ekpy~C~~C   18 (38)
T d2cota2           2 RSEWQQRERRRYKCDEC   18 (38)
T ss_dssp             CCCSCCCCSCSSBCSSS
T ss_pred             ccCcccCCCCCEecCCC
Confidence            58899999999999998

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=4.5e-07  Score=38.02  Aligned_cols=29  Identities=31%  Similarity=0.712  Sum_probs=26.7

Q ss_pred             CCceecccchhhccCCchHHHHHhhhCCC
Q psy9655          60 NPSLSCTYCSRAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        60 ~~~~~C~~C~k~f~~~~~l~~h~~~htge   88 (96)
                      ++||.|++|+..|.++..+.-|.|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47899999999999999999999999874

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.12  E-value=7.2e-07  Score=39.82  Aligned_cols=30  Identities=27%  Similarity=0.767  Sum_probs=26.9

Q ss_pred             CCceecccchhhccCCchHHHHHhhhCCCC
Q psy9655          60 NPSLSCTYCSRAFKKRSDLTRHIRSHTKEK   89 (96)
Q Consensus        60 ~~~~~C~~C~k~f~~~~~l~~h~~~htgek   89 (96)
                      .+.|.|.+|++.|.....|-.|++.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            356999999999999999999999998765

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.99  E-value=1.8e-06  Score=35.63  Aligned_cols=28  Identities=36%  Similarity=0.678  Sum_probs=25.6

Q ss_pred             Cceeccc--chhhccCCchHHHHHhhhCCC
Q psy9655          61 PSLSCTY--CSRAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        61 ~~~~C~~--C~k~f~~~~~l~~h~~~htge   88 (96)
                      +||.|..  |.|.|..-.+|.+|..+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4788987  999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=8.1e-07  Score=39.00  Aligned_cols=13  Identities=31%  Similarity=0.506  Sum_probs=12.2

Q ss_pred             hhCCCCCcccccC
Q psy9655          84 SHTKEKPFKVRSL   96 (96)
Q Consensus        84 ~htgekp~~C~~C   96 (96)
                      +|||||||+|..|
T Consensus         1 IHTgekpy~C~~C   13 (33)
T d1x6ea1           1 IHSGEKPYGCVEC   13 (33)
T ss_dssp             TTTTCCCEECSSS
T ss_pred             CcCCCCCeeCCCC
Confidence            5999999999998

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.98  E-value=2.1e-06  Score=35.33  Aligned_cols=28  Identities=36%  Similarity=0.793  Sum_probs=26.2

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htge   88 (96)
                      .-|.|..|...|.+.-.|+.|+-.|+||
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4599999999999999999999999996

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.90  E-value=1.4e-06  Score=38.69  Aligned_cols=12  Identities=25%  Similarity=0.512  Sum_probs=11.4

Q ss_pred             hCCCCCcccccC
Q psy9655          85 HTKEKPFKVRSL   96 (96)
Q Consensus        85 htgekp~~C~~C   96 (96)
                      |||||||+|.+|
T Consensus         2 ~TGekPy~C~~C   13 (35)
T d1srka_           2 SSGKRPFVCRIC   13 (35)
T ss_dssp             CSCCSCEECSSS
T ss_pred             CCCCccccCCCC
Confidence            799999999998

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=6.2e-06  Score=34.05  Aligned_cols=29  Identities=38%  Similarity=0.752  Sum_probs=24.9

Q ss_pred             CceecccchhhccCCchHHHHHhh-hCCCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRS-HTKEK   89 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~-htgek   89 (96)
                      +||.|..|.+.....++|+.|..+ |..|+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhskek   30 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccccccccccccchhhhhhhhcccccCC
Confidence            579999999999999999999976 65553

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=5.4e-06  Score=34.54  Aligned_cols=27  Identities=19%  Similarity=0.610  Sum_probs=23.7

Q ss_pred             Cceeccc--chhhccCCchHHHHHhhhCC
Q psy9655          61 PSLSCTY--CSRAFKKRSDLTRHIRSHTK   87 (96)
Q Consensus        61 ~~~~C~~--C~k~f~~~~~l~~h~~~htg   87 (96)
                      +||.|..  |++.+..+++|+.|++.+-|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5799988  99999999999999987543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=6.6e-06  Score=33.37  Aligned_cols=26  Identities=31%  Similarity=0.627  Sum_probs=24.5

Q ss_pred             CceecccchhhccCCchHHHHHhhhC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~ht   86 (96)
                      +||.|..|.+.-...+.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68999999999999999999999996

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.74  E-value=4.9e-06  Score=32.92  Aligned_cols=24  Identities=42%  Similarity=0.877  Sum_probs=22.3

Q ss_pred             eecccchhhccCCchHHHHHhhhC
Q psy9655          63 LSCTYCSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        63 ~~C~~C~k~f~~~~~l~~h~~~ht   86 (96)
                      |.|-.|.++|-.++.|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            579999999999999999999985

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=8.2e-06  Score=34.29  Aligned_cols=28  Identities=39%  Similarity=0.761  Sum_probs=24.9

Q ss_pred             Cceeccc--chhhccCCchHHHHH-hhhCCC
Q psy9655          61 PSLSCTY--CSRAFKKRSDLTRHI-RSHTKE   88 (96)
Q Consensus        61 ~~~~C~~--C~k~f~~~~~l~~h~-~~htge   88 (96)
                      +||.|..  |.|.|...++-..|+ |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            5799998  999999999999997 999764

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.70  E-value=8.2e-06  Score=33.43  Aligned_cols=25  Identities=32%  Similarity=0.635  Sum_probs=22.8

Q ss_pred             Cceeccc--chhhccCCchHHHHHhhh
Q psy9655          61 PSLSCTY--CSRAFKKRSDLTRHIRSH   85 (96)
Q Consensus        61 ~~~~C~~--C~k~f~~~~~l~~h~~~h   85 (96)
                      .||.|..  |++.|..++.|++|..+|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4799987  999999999999999887

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=2.2e-05  Score=32.21  Aligned_cols=24  Identities=42%  Similarity=0.987  Sum_probs=22.0

Q ss_pred             ceecccchhhccCCchHHHHHhhh
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSH   85 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~h   85 (96)
                      ||.|..|...|..+.+|..|+..-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            699999999999999999999753

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=4.4e-05  Score=34.23  Aligned_cols=26  Identities=23%  Similarity=0.575  Sum_probs=23.0

Q ss_pred             CCCCceecccchhhccCCchHHHHHh
Q psy9655          58 PPNPSLSCTYCSRAFKKRSDLTRHIR   83 (96)
Q Consensus        58 ~~~~~~~C~~C~k~f~~~~~l~~h~~   83 (96)
                      +|-+||.|..|+|.|-+...+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            36689999999999999999999864

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=1.9e-05  Score=34.11  Aligned_cols=26  Identities=46%  Similarity=0.864  Sum_probs=20.9

Q ss_pred             eeccc--ch---hhccCCchHHHHHhhhCCC
Q psy9655          63 LSCTY--CS---RAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        63 ~~C~~--C~---k~f~~~~~l~~h~~~htge   88 (96)
                      |.|.+  |.   +.|.....|..|+|+||||
T Consensus         3 y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           3 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             eEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            55544  44   5799999999999999997

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.30  E-value=4.4e-05  Score=32.01  Aligned_cols=26  Identities=38%  Similarity=0.783  Sum_probs=22.8

Q ss_pred             ceecccchhhccCCchHHHHHh-hhCC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIR-SHTK   87 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~-~htg   87 (96)
                      ||.|..|++.|.+..-|.+|+. .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            6999999999999999999974 5766

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.24  E-value=1.3e-05  Score=37.77  Aligned_cols=21  Identities=14%  Similarity=0.344  Sum_probs=16.8

Q ss_pred             CchHHHHHhhhCCCCCccccc--C
Q psy9655          75 RSDLTRHIRSHTKEKPFKVRS--L   96 (96)
Q Consensus        75 ~~~l~~h~~~htgekp~~C~~--C   96 (96)
                      +..|..|++ |+|||||+|.+  |
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C   26 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGC   26 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCC
Confidence            345677775 99999999987  7

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.85  E-value=0.00014  Score=29.21  Aligned_cols=22  Identities=18%  Similarity=0.646  Sum_probs=20.1

Q ss_pred             ceecccchhhccCCchHHHHHh
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIR   83 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~   83 (96)
                      ||.|..||+.+.++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5899999999999999999864

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.77  E-value=0.00027  Score=29.30  Aligned_cols=28  Identities=32%  Similarity=0.701  Sum_probs=25.1

Q ss_pred             Cceeccc--chhhccCCchHHHHHhhhCCC
Q psy9655          61 PSLSCTY--CSRAFKKRSDLTRHIRSHTKE   88 (96)
Q Consensus        61 ~~~~C~~--C~k~f~~~~~l~~h~~~htge   88 (96)
                      +.|.|..  |+-.|....-|..|+-.||||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4588987  999999999999999999997

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.00047  Score=28.14  Aligned_cols=24  Identities=33%  Similarity=0.793  Sum_probs=21.9

Q ss_pred             CceecccchhhccCCchHHHHHhh
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRS   84 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~   84 (96)
                      +||.|..|..--.++++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            579999999999999999999864

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.001  Score=26.79  Aligned_cols=26  Identities=27%  Similarity=0.477  Sum_probs=23.0

Q ss_pred             ceecccchhhccCCchHHHHHhhhCC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSHTK   87 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~htg   87 (96)
                      +-.|..|.++...+..|+.|.|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            46799999999999999999999853

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.0011  Score=29.02  Aligned_cols=28  Identities=25%  Similarity=0.573  Sum_probs=24.3

Q ss_pred             CCCceeccc--chhhccCCchHHHHHhhhC
Q psy9655          59 PNPSLSCTY--CSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        59 ~~~~~~C~~--C~k~f~~~~~l~~h~~~ht   86 (96)
                      ..+||.|..  |+..|....+|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            368999965  9999999999999988774

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.00098  Score=26.74  Aligned_cols=23  Identities=30%  Similarity=0.733  Sum_probs=21.2

Q ss_pred             ceecccchhhccCCchHHHHHhh
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRS   84 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~   84 (96)
                      .|.|+.|+....+++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            48999999999999999999975

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.04  E-value=0.0012  Score=25.77  Aligned_cols=22  Identities=32%  Similarity=0.774  Sum_probs=20.2

Q ss_pred             ceecccchhhccCCchHHHHHh
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIR   83 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~   83 (96)
                      ||.|..|...|-++..|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6999999999999999999973

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.00  E-value=0.001  Score=26.54  Aligned_cols=24  Identities=46%  Similarity=0.858  Sum_probs=20.7

Q ss_pred             eeccc--chhhccCCchHHHHHhhhC
Q psy9655          63 LSCTY--CSRAFKKRSDLTRHIRSHT   86 (96)
Q Consensus        63 ~~C~~--C~k~f~~~~~l~~h~~~ht   86 (96)
                      |.|..  |++.|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            56755  9999999999999998886

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.0026  Score=27.07  Aligned_cols=26  Identities=23%  Similarity=0.714  Sum_probs=22.1

Q ss_pred             ceecccchhhccCCchHHHHHhhhCC
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRSHTK   87 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~htg   87 (96)
                      .|.|..|+|.|.+...+.+|--.-+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            39999999999999999888766555

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.49  E-value=0.002  Score=29.69  Aligned_cols=23  Identities=30%  Similarity=0.743  Sum_probs=21.6

Q ss_pred             eecccchhhccCCchHHHHHhhh
Q psy9655          63 LSCTYCSRAFKKRSDLTRHIRSH   85 (96)
Q Consensus        63 ~~C~~C~k~f~~~~~l~~h~~~h   85 (96)
                      |.|-.|+|.|.....|+.|...|
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeccccccccCCHHHHhHhHHhc
Confidence            78999999999999999998877

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.85  E-value=0.0057  Score=23.84  Aligned_cols=22  Identities=23%  Similarity=0.884  Sum_probs=20.2

Q ss_pred             eecccchhhccCCchHHHHHhh
Q psy9655          63 LSCTYCSRAFKKRSDLTRHIRS   84 (96)
Q Consensus        63 ~~C~~C~k~f~~~~~l~~h~~~   84 (96)
                      |.|+.|-+-|.++.++..|..+
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999865

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.58  E-value=0.043  Score=26.65  Aligned_cols=36  Identities=17%  Similarity=0.272  Sum_probs=23.6

Q ss_pred             CCCCceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          58 PPNPSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        58 ~~~~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +....|.|+.|++.|..-..++   ..-.-.--|.|..|
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~~---L~d~~~~~F~C~~C   45 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFC   45 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSS
T ss_pred             ccCCceECCCCCCCcchhhHHH---hcCcCCCeEEecCC
Confidence            4455699999999996543333   23333456888877

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.50  E-value=0.012  Score=25.73  Aligned_cols=23  Identities=17%  Similarity=0.259  Sum_probs=17.5

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +.|.|..||..+             .|+-|-+|+.|
T Consensus         4 ~~~~C~vCG~i~-------------~g~~P~~CPvC   26 (37)
T d1nnqa2           4 KVYICPICGYTA-------------VDEAPEYCPVC   26 (37)
T ss_dssp             CEEECTTTCCEE-------------ESCCCSBCTTT
T ss_pred             cEEECCCCCCEe-------------cCCCCCcCCCC
Confidence            458999999854             46777888877

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.12  E-value=0.0068  Score=30.10  Aligned_cols=26  Identities=31%  Similarity=0.549  Sum_probs=22.1

Q ss_pred             CCCceecccchhhccCCchHHHHHhh
Q psy9655          59 PNPSLSCTYCSRAFKKRSDLTRHIRS   84 (96)
Q Consensus        59 ~~~~~~C~~C~k~f~~~~~l~~h~~~   84 (96)
                      |.-.|.|..|+|.|.....|..|.++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            34459999999999999999999863

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=93.11  E-value=0.016  Score=25.17  Aligned_cols=23  Identities=22%  Similarity=0.193  Sum_probs=17.1

Q ss_pred             CceecccchhhccCCchHHHHHhhhCCCCCcccccC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTKEKPFKVRSL   96 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htgekp~~C~~C   96 (96)
                      +.|.|..||..             |.|+-|-+|+.|
T Consensus         4 ~~~vC~vCGyi-------------~~g~~Pe~CPvC   26 (36)
T d1yuza2           4 KFHLCPICGYI-------------HKGEDFEKCPIC   26 (36)
T ss_dssp             CEEECSSSCCE-------------EESSCCSBCTTT
T ss_pred             CEEECCCCCCE-------------eeCCCCCcCCCC
Confidence            45899999985             446677788877

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.66  E-value=0.023  Score=23.76  Aligned_cols=22  Identities=32%  Similarity=0.526  Sum_probs=20.0

Q ss_pred             ceecccchhhccCCchHHHHHh
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIR   83 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~   83 (96)
                      .|.|.-||-.|...+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4999999999999999999974

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.02  E-value=0.21  Score=22.59  Aligned_cols=27  Identities=19%  Similarity=0.546  Sum_probs=23.2

Q ss_pred             CCCCceecccchhhccCCchHHHHHhh
Q psy9655          58 PPNPSLSCTYCSRAFKKRSDLTRHIRS   84 (96)
Q Consensus        58 ~~~~~~~C~~C~k~f~~~~~l~~h~~~   84 (96)
                      -.+.+-.|+.|+-...+..+|++|+-.
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            345678999999999999999999865

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.93  E-value=0.068  Score=21.45  Aligned_cols=23  Identities=13%  Similarity=0.564  Sum_probs=19.7

Q ss_pred             ceecccchhhccCCchHHHHHhh
Q psy9655          62 SLSCTYCSRAFKKRSDLTRHIRS   84 (96)
Q Consensus        62 ~~~C~~C~k~f~~~~~l~~h~~~   84 (96)
                      .|.|..|||..+.....+-|.-.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEee
Confidence            38899999999999999988644

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.54  E-value=0.067  Score=21.26  Aligned_cols=22  Identities=27%  Similarity=0.910  Sum_probs=18.4

Q ss_pred             eccc--chhhccCCchHHHHHhhh
Q psy9655          64 SCTY--CSRAFKKRSDLTRHIRSH   85 (96)
Q Consensus        64 ~C~~--C~k~f~~~~~l~~h~~~h   85 (96)
                      .|+.  |+|-|...+..+.|+-+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            3544  999999999999998877

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.54  E-value=0.096  Score=22.05  Aligned_cols=25  Identities=28%  Similarity=0.652  Sum_probs=21.4

Q ss_pred             CCceecccchhhccCCchHHHHHhh
Q psy9655          60 NPSLSCTYCSRAFKKRSDLTRHIRS   84 (96)
Q Consensus        60 ~~~~~C~~C~k~f~~~~~l~~h~~~   84 (96)
                      ...|.|..|.+.+..-+++-+|.-+
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHh
Confidence            3459999999999999999998644

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.46  E-value=0.15  Score=24.82  Aligned_cols=27  Identities=22%  Similarity=0.635  Sum_probs=23.6

Q ss_pred             CceecccchhhccCCchHHHHHhhhCC
Q psy9655          61 PSLSCTYCSRAFKKRSDLTRHIRSHTK   87 (96)
Q Consensus        61 ~~~~C~~C~k~f~~~~~l~~h~~~htg   87 (96)
                      .-|+|..|...|..-..|..|+..|..
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhccH
Confidence            349999999999999999999988853

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=82.83  E-value=0.4  Score=19.08  Aligned_cols=24  Identities=25%  Similarity=0.790  Sum_probs=19.3

Q ss_pred             ceeccc--chhhccCCchHHHHH-hhh
Q psy9655          62 SLSCTY--CSRAFKKRSDLTRHI-RSH   85 (96)
Q Consensus        62 ~~~C~~--C~k~f~~~~~l~~h~-~~h   85 (96)
                      .|.|..  |.-.|..+.+++.|. |.|
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhc
Confidence            477765  999999999999885 445