Psyllid ID: psy9738

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130---
Protein Sequence
MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccHHHHHHcHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccccHHHHHcccccccccccccHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccEEEEEEccccccEcHHHHHHHHHHHHHHcccccccccccccEEEEEccccccccHHHHEEEEccccccccccHHHccHHHHHHHHHHccccHHHcccHHHHHccHHHHHcccHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mapegghhrkqygpkvgyfGHWVSMAYLKMiegeppliwnenplrphfliPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLllkhpflkiarplaslTPLIMAAKEAAKGH
Flexible Loop (DISEMBL)
mapegghhrkqygpkvgYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH
Low Complexity Region (SEG)
MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH
Disordered region (IsUnstruct)
***********YGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK*KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIM*********
Disordered Region (DISOPRED)
MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK********KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAK******
Disordered Region (DISEMBL)
*********KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH
Disordered Region (DISPRO)
*APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEA****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	133	2.2.26 [Sep-21-2011]
Q29502	524	Serine/threonine-protein	yes	N/A	0.857	0.217	0.548	5e-29
Q13177	524	Serine/threonine-protein	yes	N/A	0.857	0.217	0.548	6e-29
Q64303	524	Serine/threonine-protein	yes	N/A	0.857	0.217	0.541	1e-28
Q8CIN4	524	Serine/threonine-protein	yes	N/A	0.857	0.217	0.541	1e-28
Q62829	544	Serine/threonine-protein	yes	N/A	0.849	0.207	0.522	8e-28
Q61036	559	Serine/threonine-protein	no	N/A	0.849	0.202	0.522	1e-27
Q7YQL3	559	Serine/threonine-protein	N/A	N/A	0.849	0.202	0.522	1e-27
Q7YQL4	559	Serine/threonine-protein	no	N/A	0.849	0.202	0.522	1e-27
O75914	559	Serine/threonine-protein	no	N/A	0.849	0.202	0.522	1e-27
P35465	544	Serine/threonine-protein	no	N/A	0.857	0.209	0.548	1e-27

>sp|Q29502|PAK2_RABIT Serine/threonine-protein kinase PAK 2 OS=Oryctolagus cuniculus GN=PAK2 PE=1 SV=1

 Score =  126 bits (316), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/133 (54%), Positives = 91/133 (68%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++M+EGEPP + NENPLR               
Sbjct: 410 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMVEGEPPYL-NENPLR--------------- 450

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  LL+HPFLK+A+PL+SLT
Sbjct: 451 ALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLT 510

Query: 121 PLIMAAKEAAKGH 133
           PLIMAAKEA K +
Sbjct: 511 PLIMAAKEAMKSN 523

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell motility, cell cycle progression, apoptosis or proliferation. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Full-length PAK2 stimulates cell survival and cell growth. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Phosphorylates JUN and plays an important role in EGF-induced cell proliferation. Phosphorylates many other substrates including histone H4 to promote assembly of H3.3 and H4 into nucleosomes, BAD, ribosomal protein S6, or MBP. Additionally, associates with ARHGEF7 and GIT1 to perform kinase-independent functions such as spindle orientation control during mitosis. On the other hand, apoptotic stimuli such as DNA damage lead to caspase-mediated cleavage of PAK2, generating PAK-2p34, an active p34 fragment that translocates to the nucleus and promotes cellular apoptosis involving the JNK signaling pathway. Caspase-activated PAK2 phosphorylates MKNK1 and reduces cellular translation.
Oryctolagus cuniculus (taxid: 9986)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q13177|PAK2_HUMAN Serine/threonine-protein kinase PAK 2 OS=Homo sapiens GN=PAK2 PE=1 SV=3

 Score =  125 bits (315), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/133 (54%), Positives = 91/133 (68%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++M+EGEPP + NENPLR               
Sbjct: 410 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMVEGEPPYL-NENPLR--------------- 450

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  LL+HPFLK+A+PL+SLT
Sbjct: 451 ALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLT 510

Query: 121 PLIMAAKEAAKGH 133
           PLIMAAKEA K +
Sbjct: 511 PLIMAAKEAMKSN 523

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell motility, cell cycle progression, apoptosis or proliferation. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Full-length PAK2 stimulates cell survival and cell growth. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Phosphorylates JUN and plays an important role in EGF-induced cell proliferation. Phosphorylates many other substrates including histone H4 to promote assembly of H3.3 and H4 into nucleosomes, BAD, ribosomal protein S6, or MBP. Additionally, associates with ARHGEF7 and GIT1 to perform kinase-independent functions such as spindle orientation control during mitosis. On the other hand, apoptotic stimuli such as DNA damage lead to caspase-mediated cleavage of PAK2, generating PAK-2p34, an active p34 fragment that translocates to the nucleus and promotes cellular apoptosis involving the JNK signaling pathway. Caspase-activated PAK2 phosphorylates MKNK1 and reduces cellular translation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q64303|PAK2_RAT Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus GN=Pak2 PE=1 SV=1

 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/133 (54%), Positives = 91/133 (68%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++M+EGEPP + NENPLR               
Sbjct: 410 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMVEGEPPYL-NENPLR--------------- 450

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  LL+HPFLK+A+PL+SLT
Sbjct: 451 ALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLT 510

Query: 121 PLIMAAKEAAKGH 133
           PLI+AAKEA K +
Sbjct: 511 PLILAAKEAMKSN 523

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell motility, cell cycle progression, apoptosis or proliferation. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Full-length PAK2 stimulates cell survival and cell growth. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Phosphorylates JUN and plays an important role in EGF-induced cell proliferation. Phosphorylates many other substrates including histone H4 to promote assembly of H3.3 and H4 into nucleosomes, BAD, ribosomal protein S6, or MBP. Additionally, associates with ARHGEF7 and GIT1 to perform kinase-independent functions such as spindle orientation control during mitosis. On the other hand, apoptotic stimuli such as DNA damage lead to caspase-mediated cleavage of PAK2, generating PAK-2p34, an active p34 fragment that translocates to the nucleus and promotes cellular apoptosis involving the JNK signaling pathway. Caspase-activated PAK2 phosphorylates MKNK1 and reduces cellular translation.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8CIN4|PAK2_MOUSE Serine/threonine-protein kinase PAK 2 OS=Mus musculus GN=Pak2 PE=1 SV=1

 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/133 (54%), Positives = 91/133 (68%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++M+EGEPP + NENPLR               
Sbjct: 410 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMVEGEPPYL-NENPLR--------------- 450

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  LL+HPFLK+A+PL+SLT
Sbjct: 451 ALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLT 510

Query: 121 PLIMAAKEAAKGH 133
           PLI+AAKEA K +
Sbjct: 511 PLILAAKEAMKSN 523

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell motility, cell cycle progression, apoptosis or proliferation. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Full-length PAK2 stimulates cell survival and cell growth. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Phosphorylates JUN and plays an important role in EGF-induced cell proliferation. Phosphorylates many other substrates including histone H4 to promote assembly of H3.3 and H4 into nucleosomes, BAD, ribosomal protein S6, or MBP. Additionally, associates with ARHGEF7 and GIT1 to perform kinase-independent functions such as spindle orientation control during mitosis. On the other hand, apoptotic stimuli such as DNA damage lead to caspase-mediated cleavage of PAK2, generating PAK-2p34, an active p34 fragment that translocates to the nucleus and promotes cellular apoptosis involving the JNK signaling pathway. Caspase-activated PAK2 phosphorylates MKNK1 and reduces cellular translation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q62829|PAK3_RAT Serine/threonine-protein kinase PAK 3 OS=Rattus norvegicus GN=Pak3 PE=1 SV=1

 Score =  122 bits (305), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 69/132 (52%), Positives = 90/132 (68%), Gaps = 19/132 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++M+EGEPP + NENPLR               
Sbjct: 429 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMVEGEPPYL-NENPLR--------------- 469

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  E+LS +F+DFL++CLE +V+ R SA  LL+HPFLK+A+PL+SLT
Sbjct: 470 ALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLT 529

Query: 121 PLIMAAKEAAKG 132
           PLI+AAKEA K 
Sbjct: 530 PLILAAKEAIKN 541

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, or cell cycle regulation. Plays a role in dendrite spine morphogenesis as well as synapse formation and plasticity. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Additionally, phosphorylates TNNI3/troponin I to modulate calcium sensitivity and relaxation kinetics of thin myofilaments.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q61036|PAK3_MOUSE Serine/threonine-protein kinase PAK 3 OS=Mus musculus GN=Pak3 PE=1 SV=2

 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/132 (52%), Positives = 90/132 (68%), Gaps = 19/132 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++M+EGEPP + NENPLR               
Sbjct: 444 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMVEGEPPYL-NENPLR--------------- 484

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  E+LS +F+DFL++CLE +V+ R SA  LL+HPFLK+A+PL+SLT
Sbjct: 485 ALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLT 544

Query: 121 PLIMAAKEAAKG 132
           PLI+AAKEA K 
Sbjct: 545 PLIIAAKEAIKN 556

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, or cell cycle regulation. Plays a role in dendrite spine morphogenesis as well as synapse formation and plasticity. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Additionally, phosphorylates TNNI3/troponin I to modulate calcium sensitivity and relaxation kinetics of thin myofilaments.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7YQL3|PAK3_PONPY Serine/threonine-protein kinase PAK 3 OS=Pongo pygmaeus GN=PAK3 PE=2 SV=1

 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/132 (52%), Positives = 90/132 (68%), Gaps = 19/132 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++M+EGEPP + NENPLR               
Sbjct: 444 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMVEGEPPYL-NENPLR--------------- 484

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  E+LS +F+DFL++CLE +V+ R SA  LL+HPFLK+A+PL+SLT
Sbjct: 485 ALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLT 544

Query: 121 PLIMAAKEAAKG 132
           PLI+AAKEA K 
Sbjct: 545 PLIIAAKEAIKN 556

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, or cell cycle regulation. Plays a role in dendrite spine morphogenesis as well as synapse formation and plasticity. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Additionally, phosphorylates TNNI3/troponin I to modulate calcium sensitivity and relaxation kinetics of thin myofilaments.

Pongo pygmaeus (taxid: 9600)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7YQL4|PAK3_PANTR Serine/threonine-protein kinase PAK 3 OS=Pan troglodytes GN=PAK3 PE=2 SV=1

 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/132 (52%), Positives = 90/132 (68%), Gaps = 19/132 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++M+EGEPP + NENPLR               
Sbjct: 444 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMVEGEPPYL-NENPLR--------------- 484

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  E+LS +F+DFL++CLE +V+ R SA  LL+HPFLK+A+PL+SLT
Sbjct: 485 ALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLT 544

Query: 121 PLIMAAKEAAKG 132
           PLI+AAKEA K 
Sbjct: 545 PLIIAAKEAIKN 556

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, or cell cycle regulation. Plays a role in dendrite spine morphogenesis as well as synapse formation and plasticity. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Additionally, phosphorylates TNNI3/troponin I to modulate calcium sensitivity and relaxation kinetics of thin myofilaments.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O75914|PAK3_HUMAN Serine/threonine-protein kinase PAK 3 OS=Homo sapiens GN=PAK3 PE=1 SV=2

 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/132 (52%), Positives = 90/132 (68%), Gaps = 19/132 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++M+EGEPP + NENPLR               
Sbjct: 444 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMVEGEPPYL-NENPLR--------------- 484

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  E+LS +F+DFL++CLE +V+ R SA  LL+HPFLK+A+PL+SLT
Sbjct: 485 ALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLT 544

Query: 121 PLIMAAKEAAKG 132
           PLI+AAKEA K 
Sbjct: 545 PLIIAAKEAIKN 556

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, or cell cycle regulation. Plays a role in dendrite spine morphogenesis as well as synapse formation and plasticity. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Additionally, phosphorylates TNNI3/troponin I to modulate calcium sensitivity and relaxation kinetics of thin myofilaments.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P35465|PAK1_RAT Serine/threonine-protein kinase PAK 1 OS=Rattus norvegicus GN=Pak1 PE=1 SV=3

 Score =  121 bits (303), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 73/133 (54%), Positives = 89/133 (66%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 430 MAPEVVT-RKAYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 470

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  LL+H FLKIA+PL+SLT
Sbjct: 471 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLT 530

Query: 121 PLIMAAKEAAKGH 133
           PLI AAKEA K +
Sbjct: 531 PLIAAAKEATKNN 543

The activated kinase acts on a variety of targets. Likely to be the GTPase effector that links the Rho-related GTPases to the JNK MAP kinase pathway. Activated by CDC42 and RAC1. Involved in dissolution of stress fibers and reorganization of focal complexes. Involved in regulation of microtubule biogenesis through phosphorylation of TBCB. DVL1 and PAK1 form a ternary complex with MUSK which is important for MUSK-dependent regulation of AChR clustering during the formation of the neuromuscular junction (NMJ). Activity is inhibited in cells undergoing apoptosis, potentially due to binding of CDC2L1 and CDC2L2. Phosphorylates MYL9/MLC2 (By similarity). Phosphorylates RAF1 at 'Ser-338' and 'Ser-339' resulting in: activation of RAF1, stimulation of RAF1 translocation to mitochondria, phosphorylation of BAD by RAF1, and RAF1 binding to BCL2.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
193647956	564	PREDICTED: serine/threonine-protein kina	0.857	0.202	0.676	1e-36
383858197	582	PREDICTED: serine/threonine-protein kina	0.857	0.195	0.676	4e-36
383858199	586	PREDICTED: serine/threonine-protein kina	0.857	0.194	0.676	4e-36
332020935	582	Serine/threonine-protein kinase PAK 1 [A	0.857	0.195	0.669	6e-36
322796434	582	hypothetical protein SINV_10373 [Solenop	0.857	0.195	0.669	6e-36
307174648	582	Serine/threonine-protein kinase PAK 2 [C	0.857	0.195	0.669	6e-36
357605903	595	putative beta-PAK [Danaus plexippus]	0.857	0.191	0.646	1e-35
340719433	537	PREDICTED: LOW QUALITY PROTEIN: serine/t	0.857	0.212	0.661	3e-35
328789848	582	PREDICTED: serine/threonine-protein kina	0.857	0.195	0.661	5e-35
328789850	586	PREDICTED: serine/threonine-protein kina	0.857	0.194	0.661	6e-35

>gi|193647956|ref|XP_001942875.1| PREDICTED: serine/threonine-protein kinase PAK 1-like [Acyrthosiphon pisum]

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 90/133 (67%), Positives = 99/133 (74%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RKQYGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 451 MAPEV-VTRKQYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 491

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN KPEIKEKEKLS IFQDFLDQCLE EVE RASAS LLKHPFLK++RPLASLT
Sbjct: 492 ALYLIATNGKPEIKEKEKLSPIFQDFLDQCLEVEVEDRASASELLKHPFLKLSRPLASLT 551

Query: 121 PLIMAAKEAAKGH 133
           PLIMAAK+AAKGH
Sbjct: 552 PLIMAAKQAAKGH 564

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383858197|ref|XP_003704588.1| PREDICTED: serine/threonine-protein kinase PAK 1 isoform 1 [Megachile rotundata]

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 90/133 (67%), Positives = 99/133 (74%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RKQYGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 469 MAPEV-VTRKQYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 509

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN KPEIKEK+KLS IFQDFLDQCLE EVE RA+AS LLKHPFLK+ARPLASLT
Sbjct: 510 ALYLIATNGKPEIKEKDKLSGIFQDFLDQCLEVEVEKRAAASELLKHPFLKLARPLASLT 569

Query: 121 PLIMAAKEAAKGH 133
           PLIMAAKEAAKGH
Sbjct: 570 PLIMAAKEAAKGH 582

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383858199|ref|XP_003704589.1| PREDICTED: serine/threonine-protein kinase PAK 1 isoform 2 [Megachile rotundata]

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 90/133 (67%), Positives = 99/133 (74%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RKQYGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 473 MAPEVVT-RKQYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 513

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN KPEIKEK+KLS IFQDFLDQCLE EVE RA+AS LLKHPFLK+ARPLASLT
Sbjct: 514 ALYLIATNGKPEIKEKDKLSGIFQDFLDQCLEVEVEKRAAASELLKHPFLKLARPLASLT 573

Query: 121 PLIMAAKEAAKGH 133
           PLIMAAKEAAKGH
Sbjct: 574 PLIMAAKEAAKGH 586

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020935|gb|EGI61329.1| Serine/threonine-protein kinase PAK 1 [Acromyrmex echinatior]

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 89/133 (66%), Positives = 99/133 (74%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RKQYGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 469 MAPEV-VTRKQYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 509

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN KPEIKEK+KLS IFQDFLDQCLE EVE R++AS LLKHPFLK+ARPLASLT
Sbjct: 510 ALYLIATNGKPEIKEKDKLSGIFQDFLDQCLEVEVEKRSAASELLKHPFLKLARPLASLT 569

Query: 121 PLIMAAKEAAKGH 133
           PLIMAAKEAAKGH
Sbjct: 570 PLIMAAKEAAKGH 582

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322796434|gb|EFZ18964.1| hypothetical protein SINV_10373 [Solenopsis invicta]

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 89/133 (66%), Positives = 99/133 (74%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RKQYGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 469 MAPEV-VTRKQYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 509

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN KPEIKEK+KLS IFQDFLDQCLE EVE R++AS LLKHPFLK+ARPLASLT
Sbjct: 510 ALYLIATNGKPEIKEKDKLSGIFQDFLDQCLEVEVEKRSAASELLKHPFLKLARPLASLT 569

Query: 121 PLIMAAKEAAKGH 133
           PLIMAAKEAAKGH
Sbjct: 570 PLIMAAKEAAKGH 582

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307174648|gb|EFN65047.1| Serine/threonine-protein kinase PAK 2 [Camponotus floridanus]

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 89/133 (66%), Positives = 99/133 (74%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RKQYGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 469 MAPEV-VTRKQYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 509

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN KPEIKEK+KLS IFQDFLDQCLE EVE R++AS LLKHPFLK+ARPLASLT
Sbjct: 510 ALYLIATNGKPEIKEKDKLSGIFQDFLDQCLEVEVEKRSAASELLKHPFLKLARPLASLT 569

Query: 121 PLIMAAKEAAKGH 133
           PLIMAAKEAAKGH
Sbjct: 570 PLIMAAKEAAKGH 582

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357605903|gb|EHJ64827.1| putative beta-PAK [Danaus plexippus]

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 86/133 (64%), Positives = 99/133 (74%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RKQYGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 482 MAPEV-VTRKQYGPKVDVWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 522

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN KP+IK+KEKLS +FQDFLDQCLE +VE+RA+A  LLKHPFLK+ARPLASLT
Sbjct: 523 ALYLIATNGKPDIKDKEKLSTVFQDFLDQCLEVDVESRATALDLLKHPFLKMARPLASLT 582

Query: 121 PLIMAAKEAAKGH 133
           PLIMAAKEAAKGH
Sbjct: 583 PLIMAAKEAAKGH 595

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340719433|ref|XP_003398158.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase PAK 1-like [Bombus terrestris]

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 88/133 (66%), Positives = 99/133 (74%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RKQYGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 424 MAPEV-VTRKQYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 464

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN KPEIKEK+KLS IFQDFLDQCLE EVE R++AS LLKHPFLK+ARPLASLT
Sbjct: 465 ALYLIATNGKPEIKEKDKLSGIFQDFLDQCLEVEVEKRSAASELLKHPFLKLARPLASLT 524

Query: 121 PLIMAAKEAAKGH 133
           PLIMAAKEAAKG+
Sbjct: 525 PLIMAAKEAAKGN 537

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328789848|ref|XP_001119958.2| PREDICTED: serine/threonine-protein kinase PAK 1 isoform 1 [Apis mellifera]

 Score =  152 bits (383), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 88/133 (66%), Positives = 99/133 (74%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RKQYGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 469 MAPEV-VTRKQYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 509

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN KPEIKEK+KLS IFQDFLDQCLE EVE R++AS LLKHPFLK+ARPLASLT
Sbjct: 510 ALYLIATNGKPEIKEKDKLSGIFQDFLDQCLEVEVEKRSAASELLKHPFLKLARPLASLT 569

Query: 121 PLIMAAKEAAKGH 133
           PLIMAAKEAAKG+
Sbjct: 570 PLIMAAKEAAKGN 582

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328789850|ref|XP_003251334.1| PREDICTED: serine/threonine-protein kinase PAK 1 isoform 2 [Apis mellifera]

 Score =  152 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 88/133 (66%), Positives = 99/133 (74%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RKQYGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 473 MAPEVVT-RKQYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 513

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN KPEIKEK+KLS IFQDFLDQCLE EVE R++AS LLKHPFLK+ARPLASLT
Sbjct: 514 ALYLIATNGKPEIKEKDKLSGIFQDFLDQCLEVEVEKRSAASELLKHPFLKLARPLASLT 573

Query: 121 PLIMAAKEAAKGH 133
           PLIMAAKEAAKG+
Sbjct: 574 PLIMAAKEAAKGN 586

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
FB|FBgn0014001	815	Pak "PAK-kinase" [Drosophila m	0.721	0.117	0.646	3.8e-28
UNIPROTKB|E2RJA0	524	PAK2 "Uncharacterized protein"	0.721	0.183	0.566	5.3e-24
UNIPROTKB|Q13177	524	PAK2 "Serine/threonine-protein	0.721	0.183	0.557	6.8e-24
UNIPROTKB|Q29502	524	PAK2 "Serine/threonine-protein	0.721	0.183	0.557	6.8e-24
UNIPROTKB|G3MZE2	524	PAK2 "Uncharacterized protein"	0.721	0.183	0.557	8.7e-24
UNIPROTKB|E1BS97	521	PAK2 "Uncharacterized protein"	0.721	0.184	0.548	1.4e-23
MGI|MGI:1339984	524	Pak2 "p21 protein (Cdc42/Rac)-	0.721	0.183	0.548	1.5e-23
RGD|61953	524	Pak2 "p21 protein (Cdc42/Rac)-	0.721	0.183	0.548	1.5e-23
ZFIN|ZDB-GENE-030826-29	577	pak1 "p21/Cdc42/Rac1-activated	0.721	0.166	0.548	4.2e-23
UNIPROTKB|E1C3P6	544	PAK1 "Uncharacterized protein"	0.721	0.176	0.557	5.8e-23

FB|FBgn0014001 Pak "PAK-kinase" [Drosophila melanogaster (taxid:7227)]

 Score = 324 (119.1 bits), Expect = 3.8e-28, P = 3.8e-28
 Identities = 73/113 (64%), Positives = 84/113 (74%)

Query:    22 W-VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS 80
             W + +  ++M+EGEPP + NENPL+               ALYLIATN KPEIKEK+KLS
Sbjct:   719 WSLGIMAIEMVEGEPPYL-NENPLK---------------ALYLIATNGKPEIKEKDKLS 762

Query:    81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH 133
               FQDFLDQCLE EV+ RASA  LLKHPFLK+ARPLASLTPLIMAAKEA KG+
Sbjct:   763 SAFQDFLDQCLEVEVDRRASALDLLKHPFLKLARPLASLTPLIMAAKEATKGN 815

GO:0005925 "focal adhesion" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;IDA;NAS

GO:0007155 "cell adhesion" evidence=IDA

GO:0007411 "axon guidance" evidence=IGI;IMP;TAS;IPI

GO:0007254 "JNK cascade" evidence=NAS

GO:0007391 "dorsal closure" evidence=IMP;TAS

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=NAS

GO:0016601 "Rac protein signal transduction" evidence=NAS

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IMP

GO:0050803 "regulation of synapse structure and activity" evidence=IMP

GO:0050770 "regulation of axonogenesis" evidence=IGI

GO:0016328 "lateral plasma membrane" evidence=IDA

GO:0019991 "septate junction assembly" evidence=IMP

UNIPROTKB|E2RJA0 PAK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 281 (104.0 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 64/113 (56%), Positives = 80/113 (70%)

Query:    22 W-VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS 80
             W + +  ++MIEGEPP + NENPLR               ALYLIATN  PE++  EKLS
Sbjct:   427 WSLGIMAIEMIEGEPPYL-NENPLR---------------ALYLIATNGTPELQNPEKLS 470

Query:    81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH 133
              IF+DFL++CLE +VE R SA  LL+HPFLK+A+PL+SLTPLIMAAKEA K +
Sbjct:   471 PIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLTPLIMAAKEAMKSN 523

GO:2001271 "negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis" evidence=IEA

GO:2001238 "positive regulation of extrinsic apoptotic signaling pathway" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0030296 "protein tyrosine kinase activator activity" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q13177 PAK2 "Serine/threonine-protein kinase PAK 2" [Homo sapiens (taxid:9606)]

 Score = 280 (103.6 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 63/113 (55%), Positives = 80/113 (70%)

Query:    22 W-VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS 80
             W + +  ++M+EGEPP + NENPLR               ALYLIATN  PE++  EKLS
Sbjct:   427 WSLGIMAIEMVEGEPPYL-NENPLR---------------ALYLIATNGTPELQNPEKLS 470

Query:    81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH 133
              IF+DFL++CLE +VE R SA  LL+HPFLK+A+PL+SLTPLIMAAKEA K +
Sbjct:   471 PIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLTPLIMAAKEAMKSN 523

GO:0005524 "ATP binding" evidence=IEA

GO:0019048 "virus-host interaction" evidence=IEA

GO:0040008 "regulation of growth" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:2001238 "positive regulation of extrinsic apoptotic signaling pathway" evidence=IMP

GO:0016310 "phosphorylation" evidence=IDA

GO:2001271 "negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA;TAS

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004672 "protein kinase activity" evidence=TAS

GO:0006469 "negative regulation of protein kinase activity" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0005886 "plasma membrane" evidence=TAS

GO:0006915 "apoptotic process" evidence=TAS

GO:0006921 "cellular component disassembly involved in execution phase of apoptosis" evidence=TAS

GO:0007411 "axon guidance" evidence=TAS

GO:0016032 "viral reproduction" evidence=TAS

GO:0031295 "T cell costimulation" evidence=TAS

GO:0042981 "regulation of apoptotic process" evidence=TAS

GO:0050690 "regulation of defense response to virus by virus" evidence=TAS

GO:0050852 "T cell receptor signaling pathway" evidence=TAS

GO:0042802 "identical protein binding" evidence=IPI

GO:0019901 "protein kinase binding" evidence=IPI

GO:0018105 "peptidyl-serine phosphorylation" evidence=IDA

GO:0030296 "protein tyrosine kinase activator activity" evidence=IDA

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=IDA

GO:0061098 "positive regulation of protein tyrosine kinase activity" evidence=IDA

UNIPROTKB|Q29502 PAK2 "Serine/threonine-protein kinase PAK 2" [Oryctolagus cuniculus (taxid:9986)]

 Score = 280 (103.6 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 63/113 (55%), Positives = 80/113 (70%)

Query:    22 W-VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS 80
             W + +  ++M+EGEPP + NENPLR               ALYLIATN  PE++  EKLS
Sbjct:   427 WSLGIMAIEMVEGEPPYL-NENPLR---------------ALYLIATNGTPELQNPEKLS 470

Query:    81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH 133
              IF+DFL++CLE +VE R SA  LL+HPFLK+A+PL+SLTPLIMAAKEA K +
Sbjct:   471 PIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLTPLIMAAKEAMKSN 523

GO:0005515 "protein binding" evidence=IPI

GO:0005654 "nucleoplasm" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0043065 "positive regulation of apoptotic process" evidence=IMP

GO:0097194 "execution phase of apoptosis" evidence=IMP

UNIPROTKB|G3MZE2 PAK2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 279 (103.3 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 63/113 (55%), Positives = 80/113 (70%)

Query:    22 W-VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS 80
             W + +  ++M+EGEPP + NENPLR               ALYLIATN  PE++  EKLS
Sbjct:   427 WSLGIMAIEMVEGEPPYL-NENPLR---------------ALYLIATNGTPELQNPEKLS 470

Query:    81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH 133
              IF+DFL++CLE +VE R SA  LL+HPFLK+A+PL+SLTPLIMAAKEA K +
Sbjct:   471 PIFRDFLNRCLEMDVEKRGSARELLQHPFLKLAKPLSSLTPLIMAAKEAMKSN 523

GO:2001271 "negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis" evidence=IEA

GO:2001238 "positive regulation of extrinsic apoptotic signaling pathway" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0030296 "protein tyrosine kinase activator activity" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E1BS97 PAK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 277 (102.6 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 62/113 (54%), Positives = 80/113 (70%)

Query:    22 W-VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS 80
             W + +  ++M+EGEPP + NENPLR               ALYLIATN  PE++  EKLS
Sbjct:   424 WSLGIMAIEMVEGEPPYL-NENPLR---------------ALYLIATNGTPELQNPEKLS 467

Query:    81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH 133
              IF+DFL++CLE +VE R SA  LL+HPFLK+A+PL+SLTPLI+AAKEA K +
Sbjct:   468 PIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLTPLILAAKEAMKSN 520

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0030296 "protein tyrosine kinase activator activity" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:2001238 "positive regulation of extrinsic apoptotic signaling pathway" evidence=IEA

GO:2001271 "negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis" evidence=IEA

MGI|MGI:1339984 Pak2 "p21 protein (Cdc42/Rac)-activated kinase 2" [Mus musculus (taxid:10090)]

 Score = 277 (102.6 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 62/113 (54%), Positives = 80/113 (70%)

Query:    22 W-VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS 80
             W + +  ++M+EGEPP + NENPLR               ALYLIATN  PE++  EKLS
Sbjct:   427 WSLGIMAIEMVEGEPPYL-NENPLR---------------ALYLIATNGTPELQNPEKLS 470

Query:    81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH 133
              IF+DFL++CLE +VE R SA  LL+HPFLK+A+PL+SLTPLI+AAKEA K +
Sbjct:   471 PIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLTPLILAAKEAMKSN 523

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;ISS

GO:0006915 "apoptotic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA;ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=ISO

GO:0019901 "protein kinase binding" evidence=ISO

GO:0030296 "protein tyrosine kinase activator activity" evidence=ISO

GO:0040008 "regulation of growth" evidence=IEA

GO:0042802 "identical protein binding" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=ISO

GO:0061098 "positive regulation of protein tyrosine kinase activity" evidence=ISO

GO:2001238 "positive regulation of extrinsic apoptotic signaling pathway" evidence=ISO

GO:2001271 "negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis" evidence=ISO

RGD|61953 Pak2 "p21 protein (Cdc42/Rac)-activated kinase 2" [Rattus norvegicus (taxid:10116)]

 Score = 277 (102.6 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 62/113 (54%), Positives = 80/113 (70%)

Query:    22 W-VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS 80
             W + +  ++M+EGEPP + NENPLR               ALYLIATN  PE++  EKLS
Sbjct:   427 WSLGIMAIEMVEGEPPYL-NENPLR---------------ALYLIATNGTPELQNPEKLS 470

Query:    81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH 133
              IF+DFL++CLE +VE R SA  LL+HPFLK+A+PL+SLTPLI+AAKEA K +
Sbjct:   471 PIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLTPLILAAKEAMKSN 523

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016310 "phosphorylation" evidence=ISO

GO:0018105 "peptidyl-serine phosphorylation" evidence=ISO

GO:0019901 "protein kinase binding" evidence=ISO

GO:0030296 "protein tyrosine kinase activator activity" evidence=ISO

GO:0042802 "identical protein binding" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=ISO

GO:0061098 "positive regulation of protein tyrosine kinase activity" evidence=ISO

GO:2001238 "positive regulation of extrinsic apoptotic signaling pathway" evidence=ISO

GO:2001271 "negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis" evidence=ISO

ZFIN|ZDB-GENE-030826-29 pak1 "p21/Cdc42/Rac1-activated kinase 1" [Danio rerio (taxid:7955)]

 Score = 274 (101.5 bits), Expect = 4.2e-23, P = 4.2e-23
 Identities = 62/113 (54%), Positives = 80/113 (70%)

Query:    22 W-VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS 80
             W + +  ++MIEGEPP + NENPLR               ALYLIATN  PE++  EKLS
Sbjct:   480 WSLGIMAIEMIEGEPPYL-NENPLR---------------ALYLIATNGTPELQNPEKLS 523

Query:    81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH 133
              +F+DFL++CLE +VE R SA  LL+H FLK+A+PL+SLTPLI+AAKEAAK +
Sbjct:   524 AVFRDFLNRCLEMDVEKRGSAKELLQHQFLKVAKPLSSLTPLIIAAKEAAKNN 576

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|E1C3P6 PAK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 272 (100.8 bits), Expect = 5.8e-23, P = 5.8e-23
 Identities = 63/113 (55%), Positives = 79/113 (69%)

Query:    22 W-VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS 80
             W + +  ++MIEGEPP + NENPLR               ALYLIATN  PE++  EKLS
Sbjct:   447 WSLGIMAIEMIEGEPPYL-NENPLR---------------ALYLIATNGTPELQNPEKLS 490

Query:    81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH 133
              IF+DFL++CLE +VE R SA  LL+H FLKIA+PL+SLTPLI+AAKEA K +
Sbjct:   491 PIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIIAAKEATKNN 543

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0001726 "ruffle" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0007528 "neuromuscular junction development" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0030426 "growth cone" evidence=IEA

GO:0031532 "actin cytoskeleton reorganization" evidence=IEA

GO:0033138 "positive regulation of peptidyl-serine phosphorylation" evidence=IEA

GO:0033148 "positive regulation of intracellular estrogen receptor signaling pathway" evidence=IEA

GO:0042060 "wound healing" evidence=IEA

GO:0043113 "receptor clustering" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0043507 "positive regulation of JUN kinase activity" evidence=IEA

GO:0048754 "branching morphogenesis of an epithelial tube" evidence=IEA

GO:0051496 "positive regulation of stress fiber assembly" evidence=IEA

GO:0060244 "negative regulation of cell proliferation involved in contact inhibition" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q13177	PAK2_HUMAN	2, ., 7, ., 1, 1, ., 1	0.5488	0.8571	0.2175	yes	N/A
Q64303	PAK2_RAT	2, ., 7, ., 1, 1, ., 1	0.5413	0.8571	0.2175	yes	N/A
Q29502	PAK2_RABIT	2, ., 7, ., 1, 1, ., 1	0.5488	0.8571	0.2175	yes	N/A
Q62829	PAK3_RAT	2, ., 7, ., 1, 1, ., 1	0.5227	0.8496	0.2077	yes	N/A
Q8CIN4	PAK2_MOUSE	2, ., 7, ., 1, 1, ., 1	0.5413	0.8571	0.2175	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	133
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	5e-45
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	3e-36
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	5e-36
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	1e-35
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	4e-29
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-18
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-15
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	7e-14
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	1e-13
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-12
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-11
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	1e-11
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-11
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	6e-11
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-10
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	4e-10
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	7e-10
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	5e-09
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	6e-09
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	6e-09
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	1e-07
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-07
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-07
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	3e-07
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	4e-07
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-06
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	4e-06
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	7e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	8e-06
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	1e-05
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-05
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	2e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-05
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	3e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	5e-05
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	7e-05
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	8e-05
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-04
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-04
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	3e-04
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	3e-04
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	4e-04
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	5e-04
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	0.001
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	0.001
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	0.001
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	0.001
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	0.002
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	0.002
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	0.002
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	0.002
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	0.004
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	0.004
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	0.004

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score =  147 bits (373), Expect = 5e-45
 Identities = 73/131 (55%), Positives = 89/131 (67%), Gaps = 19/131 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++M+EGEPP + NENPLR               
Sbjct: 182 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMVEGEPPYL-NENPLR--------------- 222

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  LL+HPFLKIA+PL+SLT
Sbjct: 223 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSLT 282

Query: 121 PLIMAAKEAAK 131
           PLI AAKEA K
Sbjct: 283 PLIAAAKEATK 293

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score =  125 bits (315), Expect = 3e-36
 Identities = 72/133 (54%), Positives = 91/133 (68%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++M+EGEPP + NENPLR               
Sbjct: 182 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMVEGEPPYL-NENPLR--------------- 222

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  LL+HPFLK+A+PL+SLT
Sbjct: 223 ALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLT 282

Query: 121 PLIMAAKEAAKGH 133
           PLI+AAKEA K +
Sbjct: 283 PLILAAKEAMKSN 295

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score =  124 bits (313), Expect = 5e-36
 Identities = 69/131 (52%), Positives = 90/131 (68%), Gaps = 19/131 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++M+EGEPP + NENPLR               
Sbjct: 182 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMVEGEPPYL-NENPLR--------------- 222

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  E+LS +F+DFL++CLE +V+ R SA  LL+HPFLK+A+PL+SLT
Sbjct: 223 ALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLT 282

Query: 121 PLIMAAKEAAK 131
           PLI+AAKEA K
Sbjct: 283 PLIIAAKEAIK 293

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score =  124 bits (311), Expect = 1e-35
 Identities = 72/133 (54%), Positives = 89/133 (66%), Gaps = 19/133 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 183 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 223

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  EKLS IF+DFL++CL+ +VE R SA  LL+H FLKIA+PL+SLT
Sbjct: 224 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLT 283

Query: 121 PLIMAAKEAAKGH 133
           PLI AAKEA K +
Sbjct: 284 PLIAAAKEATKNN 296

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  106 bits (267), Expect = 4e-29
 Identities = 56/126 (44%), Positives = 67/126 (53%), Gaps = 25/126 (19%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVS---MAYLKMIEGEPPLIWNENPLRPHFLIPYLFILS 57
           MAPE    RK YGPKV     W S   M  ++M EGEPP +  E PLR            
Sbjct: 183 MAPEV-IKRKDYGPKVDI---W-SLGIMC-IEMAEGEPPYL-REPPLR------------ 223

Query: 58  CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA 117
              AL+LI T   P +K  EK S  F+DFL++CL ++ E R SA  LL+HPFLK A P  
Sbjct: 224 ---ALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKE 280

Query: 118 SLTPLI 123
              PLI
Sbjct: 281 EFAPLI 286

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 77.5 bits (191), Expect = 3e-18
 Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 19/123 (15%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    R  YG +V  +   + +  ++M++GEPP  +NE PL               Q
Sbjct: 182 MAPEV-ISRLPYGTEVDIWS--LGIMVIEMVDGEPPY-FNEPPL---------------Q 222

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           A+  I  N  P++K   K+S   + FLD+ L  +   RA+A+ LL HPFL  A P +S+ 
Sbjct: 223 AMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPSSIV 282

Query: 121 PLI 123
           PL+
Sbjct: 283 PLM 285

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 70.3 bits (173), Expect = 1e-15
 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 23/111 (20%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAY--LKMIEGEPPLIWNENPLRPHFLIPYLFILSC 58
           MAPE   + K Y  K      W S+    +++ EG+PP      P++             
Sbjct: 164 MAPEV-INGKPYDYKADI---W-SLGITAIELAEGKPPY-SELPPMK------------- 204

Query: 59  RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF 109
             AL+ IATN  P ++  EK S  F+DFL +CL++  E R +A  LLKHPF
Sbjct: 205 --ALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 65.8 bits (160), Expect = 7e-14
 Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 19/123 (15%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    R  YGP+V  +   + +  ++M++GEPP  +NE PL+               
Sbjct: 183 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK--------------- 223

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           A+ +I  N  P++K   K+S   + FLD+ L  +   RA+A+ LLKHPFL  A P + + 
Sbjct: 224 AMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPSCIV 283

Query: 121 PLI 123
           PL+
Sbjct: 284 PLM 286

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 65.4 bits (159), Expect = 1e-13
 Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 19/123 (15%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    R  YG +V  +   + +  ++MI+GEPP  +NE PL               Q
Sbjct: 185 MAPEV-ISRLPYGTEVDIWS--LGIMVIEMIDGEPPY-FNEPPL---------------Q 225

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           A+  I  N  P +K+  K+S + + FLD  L  E   RA+A  LL+HPFLK+A P + + 
Sbjct: 226 AMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPSCIV 285

Query: 121 PLI 123
           PL+
Sbjct: 286 PLM 288

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 61.1 bits (149), Expect = 3e-12
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 16/83 (19%)

Query: 28  LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 87
           ++M EG+PP   + +P+R  F+IP                   P + + EK S  F DF+
Sbjct: 190 IEMAEGKPPYS-DIHPMRAIFMIP---------------NKPPPTLSDPEKWSPEFNDFV 233

Query: 88  DQCLEEEVETRASASLLLKHPFL 110
            +CL ++ E R SA  LL+HPF+
Sbjct: 234 KKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 59.6 bits (145), Expect = 1e-11
 Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 17/96 (17%)

Query: 28  LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 87
           +++ +GEPPL  + +P+R  FLIP                N  P + E  K S+ F+DF+
Sbjct: 189 IELAKGEPPLS-DLHPMRVLFLIP---------------KNNPPSL-EGNKFSKPFKDFV 231

Query: 88  DQCLEEEVETRASASLLLKHPFLKIARPLASLTPLI 123
             CL ++ + R SA  LLKH F+K A+  + LT LI
Sbjct: 232 SLCLNKDPKERPSAKELLKHKFIKKAKKTSYLTLLI 267

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 59.2 bits (144), Expect = 1e-11
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 16/83 (19%)

Query: 28  LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 87
           +++ +G+PPL  + +P+R               AL+ I  N  P +K  E  S+ F DF+
Sbjct: 209 IELADGKPPLC-DMHPMR---------------ALFKIPRNPPPTLKSPENWSKKFNDFI 252

Query: 88  DQCLEEEVETRASASLLLKHPFL 110
            +CL +  E R     LL+HPF+
Sbjct: 253 SECLIKNYEQRPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 57.6 bits (140), Expect = 5e-11
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 22/86 (25%)

Query: 28  LKMIEGEPPLIWNE--NPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKLSQIFQ 84
           ++M  G+PP  W+E  NP+                ALY I ++ + PEI E   LS+  +
Sbjct: 194 IEMATGKPP--WSELGNPM---------------AALYKIGSSGEPPEIPEH--LSEEAK 234

Query: 85  DFLDQCLEEEVETRASASLLLKHPFL 110
           DFL +CL  + + R +A  LL+HPFL
Sbjct: 235 DFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 57.7 bits (140), Expect = 6e-11
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 22/113 (19%)

Query: 1   MAPEGGHHRKQYGPKVGYFGH---W-VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFIL 56
           MAPE     +    K GY G    W + +  +++ E +PP+ ++ +P+R  FLI      
Sbjct: 168 MAPEVAAVER----KGGYDGKCDIWALGITAIELAELQPPM-FDLHPMRALFLISK---- 218

Query: 57  SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF 109
                    +    P++K+KEK S +F DF+ +CL ++ + R +A+ LL+HPF
Sbjct: 219 ---------SNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 57.1 bits (138), Expect = 1e-10
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 1/82 (1%)

Query: 51  PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
           P LF ++   ALY IA N  P +   +  S  F++F+D CL++  + R S+  LLKH F+
Sbjct: 212 PPLFNMNAMSALYHIAQNDSPTLSSND-WSDYFRNFVDSCLQKIPQDRPSSEELLKHRFV 270

Query: 111 KIARPLASLTPLIMAAKEAAKG 132
              RP   +  LI   K+A + 
Sbjct: 271 LRERPPTVIIDLIQRTKDAVRE 292

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 55.8 bits (134), Expect = 4e-10
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 51  PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
           P LF ++   ALY IA N+ P   +    S+ F++F+D CL++  + R ++ +LLKH F+
Sbjct: 212 PPLFNMNAMSALYHIAQNESP-ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270

Query: 111 KIARPLASLTPLIMAAKEAAK 131
              RP   +  LI   K+A +
Sbjct: 271 LRERPPTVIMDLIQRTKDAVR 291

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 54.7 bits (132), Expect = 7e-10
 Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 23/114 (20%)

Query: 1   MAPEGGHHRKQYGPKVGYFGH---W-VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFIL 56
           MAPE        G   G+      W +    L+M  G+ P  W+E  L   F I      
Sbjct: 170 MAPE----VITGGKGKGHGRAADIWSLGCVVLEMATGKRP--WSE--LDNEFQI------ 215

Query: 57  SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
                ++ +    KP I +  +LS   +DFLD+CLE + + R +AS LL+HPF+
Sbjct: 216 -----MFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 52.7 bits (126), Expect = 5e-09
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 51  PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
           P LF ++   ALY IA N  P ++  E  +  F+ F+D CL++  + R +++ LL+H F+
Sbjct: 218 PPLFNMNAMSALYHIAQNDSPTLQSNE-WTDSFRGFVDYCLQKIPQERPASAELLRHDFV 276

Query: 111 KIARPLASLTPLIMAAKEAAK 131
           +  RP   L  LI   K+A +
Sbjct: 277 RRDRPARVLIDLIQRTKDAVR 297

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 52.3 bits (125), Expect = 6e-09
 Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 19/123 (15%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    R  YG +V  +   + +  ++M++GEPP  ++++P+               Q
Sbjct: 184 MAPEV-ISRTPYGTEVDIWS--LGIMVIEMVDGEPPY-FSDSPV---------------Q 224

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           A+  +  +  P++K   K+S + +DFL++ L  E + RA+A  LL HPFL        L 
Sbjct: 225 AMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLPECLV 284

Query: 121 PLI 123
           PLI
Sbjct: 285 PLI 287

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 52.4 bits (125), Expect = 6e-09
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 51  PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
           P LF ++   ALY IA N+ P ++  E  S  F++F+D CL++  + R ++  LLKH F+
Sbjct: 222 PPLFNMNAMSALYHIAQNESPTLQSNE-WSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280

Query: 111 KIARPLASLTPLIMAAKEAAK 131
              RP   L  LI   K+A +
Sbjct: 281 LRERPETVLIDLIQRTKDAVR 301

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 48.5 bits (115), Expect = 1e-07
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 17/83 (20%)

Query: 28  LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 87
           ++M EG PPL  + +P+R               AL+LI  N  P++K K K S+ F DF+
Sbjct: 217 IEMAEGAPPLC-DMHPMR---------------ALFLIPRNPPPKLKSK-KWSKKFIDFI 259

Query: 88  DQCLEEEVETRASASLLLKHPFL 110
           + CL +   +R S   LLKHPF+
Sbjct: 260 EGCLVKNYLSRPSTEQLLKHPFI 282

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 21/125 (16%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE     K Y  K   +   + +   +M  G PP   + +  R               
Sbjct: 168 MAPEVITEGKYYDTKADIWS--LGITIYEMATGNPPYS-DVDAFR--------------- 209

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI--ARPLAS 118
           A+ LI  +K P +++    S++ ++F+  CL+EE + R SA  LLK  ++K     P++ 
Sbjct: 210 AMMLIPKSKPPRLEDNG-YSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSKTPVSI 268

Query: 119 LTPLI 123
           L  LI
Sbjct: 269 LKELI 273

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 47.3 bits (112), Expect = 3e-07
 Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 18/94 (19%)

Query: 28  LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 87
           ++M + EPP     NP+R                L  IA ++ P + +  + S  F+DFL
Sbjct: 199 IEMAQIEPPH-HELNPMR---------------VLLKIAKSEPPTLAQPSRWSSEFKDFL 242

Query: 88  DQCLEEEVETRASASLLLKHPFLKIA--RPLASL 119
            +CLE+ V+ R + + LL+HPF+ +   +P+  L
Sbjct: 243 KKCLEKNVDARWTTTQLLQHPFVTVNSNKPIREL 276

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 47.4 bits (112), Expect = 3e-07
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 17/83 (20%)

Query: 28  LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 87
           ++M EG PPL  + +P+R               AL+LI  N  P +K K K S+ FQ F+
Sbjct: 207 IEMAEGAPPLC-DMHPMR---------------ALFLIPRNPAPRLKSK-KWSKKFQSFI 249

Query: 88  DQCLEEEVETRASASLLLKHPFL 110
           + CL +    R +   L+KHPF+
Sbjct: 250 ESCLVKNHSQRPTTEQLMKHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 47.3 bits (112), Expect = 4e-07
 Identities = 23/61 (37%), Positives = 34/61 (55%)

Query: 51  PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
           P LF +   + L+ I  N  P +   EK  + F  F+ QCL ++ E R S + LL+HPF+
Sbjct: 231 PPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFI 290

Query: 111 K 111
           K
Sbjct: 291 K 291

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 45.3 bits (108), Expect = 1e-06
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 18/81 (22%)

Query: 30  MIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQ 89
           ++ G PP  ++ NP+                AL+ I  +  P + E   +S   +DFL Q
Sbjct: 192 LLTGNPPY-YDLNPMA---------------ALFRIVQDDHPPLPEG--ISPELKDFLMQ 233

Query: 90  CLEEEVETRASASLLLKHPFL 110
           C +++   R +A  LLKHP++
Sbjct: 234 CFQKDPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 44.3 bits (104), Expect = 4e-06
 Identities = 26/72 (36%), Positives = 39/72 (54%)

Query: 56  LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 115
           L+  + L  IA ++ P + +  K S  F+DFL   L++  ETR SA+ LL+HPF+     
Sbjct: 218 LNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTS 277

Query: 116 LASLTPLIMAAK 127
              L  L+  AK
Sbjct: 278 NRPLRELVAEAK 289

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 43.5 bits (103), Expect = 7e-06
 Identities = 27/114 (23%), Positives = 42/114 (36%), Gaps = 25/114 (21%)

Query: 1   MAPEGGHHRKQYGPKVGY--FGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC 58
           MAPE       Y  K     FG    +  +++  G  P              P       
Sbjct: 173 MAPEVMEQVHGYDFKADIWSFG----ITAIELATGAAPY---------SKYPPM------ 213

Query: 59  RQALYLIATNKKPEI---KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF 109
            + L L   N  P +    + +K S+ F+  +  CL+++   R +A  LLKH F
Sbjct: 214 -KVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKF 266

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 43.2 bits (102), Expect = 8e-06
 Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 23/112 (20%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHW-VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCR 59
           MAPE    +  YG        W +    L+M  G+PP  W++             +    
Sbjct: 168 MAPEVIAQQGGYGLAADI---WSLGCTVLEMATGKPP--WSQ----------LEGV---- 208

Query: 60  QALYLIATNKK-PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
            A++ I  +K+ P I +   LS   +DF+ +CL+ +   R +A+ LL+HPF+
Sbjct: 209 AAVFKIGRSKELPPIPDH--LSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 16/83 (19%)

Query: 28  LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 87
           +++ +G+PPL  + +P+R               AL+ I  N  P + + E  S  F DF+
Sbjct: 220 IELGDGDPPLA-DLHPMR---------------ALFKIPRNPPPTLHQPELWSNEFNDFI 263

Query: 88  DQCLEEEVETRASASLLLKHPFL 110
            +CL ++ E R + S LL+H F+
Sbjct: 264 RKCLTKDYEKRPTVSDLLQHVFI 286

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 16/87 (18%)

Query: 23  VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKEKLSQ 81
           V    ++M   +PP  WN      H              ++ IA+    P I E   LS 
Sbjct: 194 VGCVIIEMATAKPP--WNAEKHSNHL-----------ALIFKIASATTAPSIPEH--LSP 238

Query: 82  IFQDFLDQCLEEEVETRASASLLLKHP 108
             +D   +CLE + E R  +  LLKHP
Sbjct: 239 GLRDVTLRCLELQPEDRPPSRELLKHP 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 16/83 (19%)

Query: 28  LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 87
           +++ + EPP     NP+R                L  I  ++ P + +  K S  F DFL
Sbjct: 199 IELAQMEPPHH-ELNPMR---------------VLLKILKSEPPTLDQPSKWSSSFNDFL 242

Query: 88  DQCLEEEVETRASASLLLKHPFL 110
             CL ++ + R +A+ LLKHPF+
Sbjct: 243 KSCLVKDPDDRPTAAELLKHPFV 265

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)

Query: 62  LYLIATNKKPEIKEKEKL----SQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
           L  I     PE+K++       S+ F+DF+ QCLE++   R +   +L+HP++K 
Sbjct: 217 LSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA 271

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 71  PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL-ASLTPLI 123
            +       S+ F  F++ CL+ + E+R SAS LL H F K  +    SL  L+
Sbjct: 259 VDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRRNTSLLDLL 312

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 41.0 bits (97), Expect = 5e-05
 Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 1/42 (2%)

Query: 70  KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
            P +  +E  S  F+DF+  CL+++ + R SA+ LL+HPF+K
Sbjct: 220 PPSLPAEEF-SPEFRDFISACLQKDPKKRPSAAELLQHPFIK 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 40.4 bits (95), Expect = 7e-05
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 76  KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
             K S  FQDF++ CL ++   R S   LL+HPF+K
Sbjct: 226 SGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIK 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 40.2 bits (95), Expect = 8e-05
 Identities = 13/51 (25%), Positives = 23/51 (45%)

Query: 60  QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
           +    I   K P    +  +S   +D + + L ++ E R +A   L+HPF 
Sbjct: 204 ELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 14/110 (12%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE       YGPKV  +   V +    ++ G+PP    EN L    LI    IL    
Sbjct: 165 MAPEVLLGGNGYGPKVDVWSLGVILYE--LLTGKPPF-SGENILDQLQLIRR--ILGPP- 218

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
                    + +  +    S+  +D + +CL ++   R +A  +L+HP+ 
Sbjct: 219 --------LEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 22/113 (19%)

Query: 1   MAPEGGH-HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCR 59
           MAPE  H + + Y  KV  +   +    L+M  G  P  W++                  
Sbjct: 177 MAPEVIHSYSQGYSAKVDIWS--LGCVVLEMFAGRRP--WSD--------------EEAI 218

Query: 60  QALYLIATNKK-PEIKEK--EKLSQIFQDFLDQCLEEEVETRASASLLLKHPF 109
            A++ +   +  P I       LS +  DFL+ C     + R +A  LL+HPF
Sbjct: 219 AAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 38.9 bits (91), Expect = 3e-04
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 60  QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
           + L  I   + P +   E  S  F  F+D CL ++   R     LL+HPF++ 
Sbjct: 226 EVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 24/111 (21%)

Query: 1   MAPE--GGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC 58
           M+PE   G     YG K   +   V    ++M+  +PP  W E                 
Sbjct: 174 MSPEVISGE---GYGRKADVWS--VGCTVVEMLTEKPP--WAE--------------FEA 212

Query: 59  RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF 109
             A++ IAT +    +    +S   ++FL +   E  + R SA  LL+H F
Sbjct: 213 MAAIFKIAT-QPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFF 262

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 38.4 bits (89), Expect = 4e-04
 Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 27/114 (23%)

Query: 1   MAPE----GGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFIL 56
           MAPE     G+ RK     +G           +M  G+PPL  + + L            
Sbjct: 175 MAPEVINESGYGRKSDIWSIG-------CTVFEMATGKPPLA-SMDRL------------ 214

Query: 57  SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
               A++ I  ++    +  +  S    DF+  CL  +   R SA  LL+H FL
Sbjct: 215 ---AAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 38.1 bits (88), Expect = 5e-04
 Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 49  LIPYLFILSCRQALYLIATN--KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK 106
           L P +F L   +AL+L+  +  + P++K+K K S  F  F+   L +  + R +A  LL+
Sbjct: 205 LQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264

Query: 107 HPF 109
           HPF
Sbjct: 265 HPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 37.2 bits (86), Expect = 0.001
 Identities = 17/40 (42%), Positives = 22/40 (55%)

Query: 79  LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLAS 118
            S  F  F++QCL+   + R SAS LL H F K  +  AS
Sbjct: 279 FSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRAS 318

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 37.0 bits (86), Expect = 0.001
 Identities = 15/39 (38%), Positives = 25/39 (64%)

Query: 76  KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR 114
            EK S  FQDF+++CL++  + R +   LL+HPF ++  
Sbjct: 230 AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 19/97 (19%)

Query: 28  LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 87
           +++ +GEPP   + +P+R  FLIP                N  P ++ +   S+ F++F+
Sbjct: 192 IELAKGEPPNS-DLHPMRVLFLIP---------------KNSPPTLEGQY--SKPFKEFV 233

Query: 88  DQCLEEEVETRASASLLLKHPFL-KIARPLASLTPLI 123
           + CL ++   R +A  LLKH F+ +  +  + LT LI
Sbjct: 234 EACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELI 270

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 60  QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
           QA++ I  N  PEI     +S    DFL++  E +   R +A+ LLKHPFL
Sbjct: 219 QAIFKIGENASPEIPSN--ISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 19/97 (19%)

Query: 28  LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 87
           +++ +GEPP   + +P+R  FLIP                 K        + S+ F++F+
Sbjct: 192 IELAKGEPPNS-DMHPMRVLFLIP-----------------KNNPPTLTGEFSKPFKEFI 233

Query: 88  DQCLEEEVETRASASLLLKHPFL-KIARPLASLTPLI 123
           D CL ++   R +A  LLKH F+ K A+  + LT LI
Sbjct: 234 DACLNKDPSFRPTAKELLKHKFIVKNAKKTSYLTELI 270

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 19/46 (41%), Positives = 26/46 (56%)

Query: 68  NKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA 113
           N+ P        S  FQDF+D+CL++  + RA    L KHPF+K A
Sbjct: 248 NEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 13/92 (14%)

Query: 29  KMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS--QIFQDF 86
           + ++ E P    E  L     I           L  +  +   +    E +S  + F+DF
Sbjct: 96  EALDYELPYN-EERELSAILEI----------LLNGMPADDPRDRSNLEGVSAARSFEDF 144

Query: 87  LDQCLEEEVETRASASLLLKHPFLKIARPLAS 118
           +  C     + R +A+  L H     A  L  
Sbjct: 145 MRLCASRLPQRREAANHYLAHCRALFAETLEL 176

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 9/68 (13%)

Query: 49  LIPYLFILSCRQALYLIATNKKPEIKEKE-------KLSQIFQDFLDQCLEEEVETRASA 101
           LIP    +  +  L+  A  + PE+KE E       KLS +  D   QCL  + + R S+
Sbjct: 220 LIPRHQEIFQKNPLF--AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSS 277

Query: 102 SLLLKHPF 109
           S LL H F
Sbjct: 278 SQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 35.4 bits (81), Expect = 0.004
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 60  QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF-LKIARPLAS 118
           + L+LI  N  P ++     S+  ++F++ CL +E   R +A  LLKH F ++ A+  + 
Sbjct: 208 KVLFLIPKNNPPTLEGN--YSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFAKKTSY 265

Query: 119 LTPLI 123
           LT LI
Sbjct: 266 LTELI 270

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 35.6 bits (82), Expect = 0.004
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 80  SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLAS 118
           S+ F+ F+  CL+ E   R SA  LL+HPF  I R    
Sbjct: 301 SREFRHFISCCLQREPAKRWSAMQLLQHPF--ILRAQPG 337

Length = 353

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 35.2 bits (81), Expect = 0.004
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 21/112 (18%)

Query: 1   MAPEG-GHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCR 59
           MAPE      + YG     +    ++  ++M  G+PP I    P               +
Sbjct: 176 MAPEVIDKGPRGYGAPADIWSLGCTI--VEMATGKPPFIELGEP---------------Q 218

Query: 60  QALYLIATNKK-PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
            A++ +   K  PEI E   LS   ++F+ +C E + + RASA  LL+ PFL
Sbjct: 219 AAMFKVGMFKIHPEIPES--LSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	133
KOG0578|consensus	550		99.93
KOG0201|consensus	467		99.85
KOG0581|consensus	364		99.81
KOG0033|consensus	355		99.76
KOG0579|consensus	1187		99.75
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.74
KOG0574|consensus	502		99.74
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.73
KOG0660|consensus	359		99.73
KOG0575|consensus	592		99.73
KOG0588|consensus	786		99.73
KOG0577|consensus	948		99.72
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.72
KOG0582|consensus	516		99.71
KOG0610|consensus	459		99.71
KOG0593|consensus	396		99.69
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.69
KOG0615|consensus	475		99.68
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.68
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.67
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.67
KOG0605|consensus	550		99.66
KOG0198|consensus	313		99.66
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.66
KOG0592|consensus	604		99.66
KOG0598|consensus	357		99.66
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.65
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.65
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.65
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.64
PTZ00284	467	protein kinase; Provisional	99.64
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.63
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.63
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.62
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.62
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.62
KOG0596|consensus	677		99.62
KOG0616|consensus	355		99.62
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.62
KOG0597|consensus	808		99.62
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.62
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.62
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.62
PTZ00036	440	glycogen synthase kinase; Provisional	99.61
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.61
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.61
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.61
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.61
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.61
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.6
KOG0583|consensus	370		99.6
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.6
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.6
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.59
KOG0694|consensus	694		99.59
KOG0032|consensus	382		99.59
KOG0983|consensus	391		99.59
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.59
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.59
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.59
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.59
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.59
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.59
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.59
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.59
KOG0607|consensus	463		99.59
KOG0661|consensus	538		99.58
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.58
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.58
KOG0604|consensus	400		99.58
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.58
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.58
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.58
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.58
KOG0603|consensus	612		99.57
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.57
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.57
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.57
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.57
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.57
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.57
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.57
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.57
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.57
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.56
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.56
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.56
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.56
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.56
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.56
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.56
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.56
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.56
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.56
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.56
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.55
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.55
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.55
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.55
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.55
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.55
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.54
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.54
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.54
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.54
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.54
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.54
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.54
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.54
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.54
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.54
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.54
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.54
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.54
KOG0599|consensus	411		99.54
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.54
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.54
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.54
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.54
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.54
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.54
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.53
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.53
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.53
KOG4717|consensus	864		99.53
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.53
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.53
KOG0671|consensus	415		99.53
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.53
KOG4279|consensus	1226		99.53
PTZ00283	496	serine/threonine protein kinase; Provisional	99.53
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.53
KOG0658|consensus	364		99.53
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.53
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.53
PHA03212	391	serine/threonine kinase US3; Provisional	99.53
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.53
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.53
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.53
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.52
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.52
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.52
PHA03207	392	serine/threonine kinase US3; Provisional	99.52
KOG4645|consensus	1509		99.52
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.52
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.52
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.52
KOG0667|consensus	586		99.52
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.52
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.52
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.52
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.51
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.51
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.51
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.51
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.51
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.51
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.5
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.5
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.5
PHA03209	357	serine/threonine kinase US3; Provisional	99.5
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.5
PTZ00267	478	NIMA-related protein kinase; Provisional	99.5
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.5
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.5
PHA02988	283	hypothetical protein; Provisional	99.5
KOG0585|consensus	576		99.5
KOG0659|consensus	318		99.5
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.5
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.5
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.5
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.49
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.49
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.49
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.49
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.49
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.49
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.49
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.49
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.49
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.49
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.49
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.48
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.48
KOG0690|consensus	516		99.48
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.48
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.48
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.48
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.48
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.47
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.47
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.47
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.47
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.47
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.47
KOG0663|consensus	419		99.47
PHA03211	461	serine/threonine kinase US3; Provisional	99.47
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.47
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.47
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.47
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.47
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.47
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.46
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.46
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.46
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.46
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.46
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.46
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.46
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.46
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.46
KOG1290|consensus	590		99.46
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.46
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.46
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.46
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.45
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.45
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.45
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.45
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.45
KOG0986|consensus	591		99.45
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.45
PLN00009	294	cyclin-dependent kinase A; Provisional	99.45
KOG0591|consensus	375		99.44
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.44
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.44
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.44
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.44
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.44
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.44
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.44
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.43
PHA03210	501	serine/threonine kinase US3; Provisional	99.43
KOG4721|consensus	904		99.43
KOG0580|consensus	281		99.42
KOG0600|consensus	560		99.42
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.42
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.42
KOG0587|consensus	953		99.42
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.42
KOG0589|consensus	426		99.41
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.41
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.41
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.41
KOG0192|consensus	362		99.4
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.4
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.4
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.4
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.4
KOG0594|consensus	323		99.4
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.4
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.4
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.4
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.39
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.39
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.39
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.39
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.39
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.38
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.38
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.38
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.38
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.38
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.37
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.37
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.37
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.37
KOG2345|consensus	302		99.37
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.37
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.37
PLN00181	793	protein SPA1-RELATED; Provisional	99.37
KOG0665|consensus	369		99.36
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.36
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.36
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.36
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.35
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.35
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.35
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.35
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.35
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.34
KOG0696|consensus	683		99.34
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.34
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.33
KOG0670|consensus	752		99.33
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.33
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.33
KOG0584|consensus	632		99.33
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.33
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.32
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.32
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.32
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.32
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.32
KOG0668|consensus	338		99.32
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.32
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.32
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.32
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.32
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.31
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.31
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.31
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.31
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.31
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.31
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.31
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.31
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.31
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.31
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.31
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.3
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.3
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.3
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.3
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.3
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.3
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.3
KOG1006|consensus	361		99.29
KOG0197|consensus	468		99.29
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.28
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.28
KOG0614|consensus	732		99.28
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.27
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.27
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.27
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.27
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.27
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.27
KOG1026|consensus	774		99.26
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.26
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.26
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.26
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.26
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.25
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.25
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.25
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.25
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.25
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.25
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.25
KOG0595|consensus	429		99.24
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.24
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.24
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.23
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.23
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.22
KOG0666|consensus	438		99.22
KOG1151|consensus	775		99.22
KOG0669|consensus	376		99.22
KOG1095|consensus	1025		99.21
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.21
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.21
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.2
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.19
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.18
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.18
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.18
KOG4236|consensus	888		99.17
PHA02882	294	putative serine/threonine kinase; Provisional	99.17
KOG0612|consensus	1317		99.17
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.17
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.16
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.16
KOG1989|consensus	738		99.16
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.16
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.15
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.15
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.14
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.14
KOG0695|consensus	593		99.13
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.1
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.09
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.08
KOG0193|consensus	678		99.08
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.07
KOG0586|consensus	596		99.07
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.06
KOG0608|consensus	1034		99.05
KOG1027|consensus	903		99.04
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.01
KOG0200|consensus	609		99.0
KOG1024|consensus	563		98.99
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.98
KOG0611|consensus	668		98.95
KOG1167|consensus	418		98.95
KOG4257|consensus	974		98.94
KOG0662|consensus	292		98.91
KOG0576|consensus	829		98.89
KOG0196|consensus	996		98.89
KOG0199|consensus	1039		98.87
KOG1035|consensus	1351		98.84
KOG0664|consensus	449		98.82
KOG0194|consensus	474		98.81
KOG4278|consensus	1157		98.77
KOG0590|consensus	601		98.76
KOG0606|consensus	1205		98.67
KOG1187|consensus	361		98.55
KOG0984|consensus	282		98.42
KOG0603|consensus	612		98.4
KOG0195|consensus	448		98.31
KOG1025|consensus	1177		98.23
KOG1033|consensus	516		98.21
KOG1094|consensus	807		98.21
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	97.97
KOG1240|consensus	1431		97.85
KOG0606|consensus	1205		97.75
KOG4158|consensus	598		97.7
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	97.43
KOG4250|consensus	732		97.29
KOG1023|consensus	484		97.21
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.18
KOG1345|consensus	378		97.17
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.11
KOG2052|consensus	513		97.02
KOG0590|consensus	601		96.85
KOG3653|consensus	534		96.69
KOG2137|consensus	700		96.31
KOG1266|consensus	458		95.35
KOG0601|consensus	524		87.52
KOG1093|consensus	725		85.3

>KOG0578|consensus

Probab=99.93  E-value=5.9e-26  Score=170.70  Aligned_cols=112  Identities=59%  Similarity=0.959  Sum_probs=107.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +..+.|+.++||||  +|+.+.||+.|++|| ..+++++               +++.+..++.+.+..+..++
T Consensus       436 MAPEV-vtrk~YG~KVDIWS--LGIMaIEMveGEPPY-lnE~Plr---------------AlyLIa~ng~P~lk~~~klS  496 (550)
T KOG0578|consen  436 MAPEV-VTRKPYGPKVDIWS--LGIMAIEMVEGEPPY-LNENPLR---------------ALYLIATNGTPKLKNPEKLS  496 (550)
T ss_pred             cchhh-hhhcccCccccchh--hhhHHHHHhcCCCCc-cCCChHH---------------HHHHHhhcCCCCcCCccccC
Confidence            89999 99999999999999  999999999999999 8888888               99999999999999899999


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK  131 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~~~  131 (133)
                      +.+++|+++||+.|+.+|+++.|||+||||+.+...+++.+++.+++++.+
T Consensus       497 ~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p~ssL~pLi~~~~~~~~  547 (550)
T KOG0578|consen  497 PELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKPESSLNPLILAARKASR  547 (550)
T ss_pred             HHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCCHHHhHHHHHHHHHhhc
Confidence            999999999999999999999999999999999999999999999988765

>KOG0201|consensus

Probab=99.85  E-value=5.5e-22  Score=145.96  Aligned_cols=108  Identities=33%  Similarity=0.586  Sum_probs=98.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +...+|+.++||||  +|++.++|..|.+|+ ...++..               .++.|....+|.+..  .++
T Consensus       178 MAPEV-I~~~~Y~~KADIWS--LGITaiEla~GePP~-s~~hPmr---------------vlflIpk~~PP~L~~--~~S  236 (467)
T KOG0201|consen  178 MAPEV-IKQSGYDTKADIWS--LGITAIELAKGEPPH-SKLHPMR---------------VLFLIPKSAPPRLDG--DFS  236 (467)
T ss_pred             cchhh-hccccccchhhhhh--hhHHHHHHhcCCCCC-cccCcce---------------EEEeccCCCCCcccc--ccC
Confidence            89999 88889999999999  999999999999999 7778877               666777778888844  789


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEA  129 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~  129 (133)
                      +.+++|+..||..+|+.||+|.++|+|+|++.+.....+..+|.+.+++
T Consensus       237 ~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~k~s~L~~~i~r~~~~  285 (467)
T KOG0201|consen  237 PPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAKKTSELKELIDRYKRW  285 (467)
T ss_pred             HHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcCCchHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999987654

>KOG0581|consensus

Probab=99.81  E-value=3.7e-20  Score=133.93  Aligned_cols=99  Identities=29%  Similarity=0.486  Sum_probs=80.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||. +.+..|+.++||||  +|+.++|+..|+.|| ....+..   .       .....+..|..+.+|.++.. .++
T Consensus       244 MsPER-i~g~~Ys~~sDIWS--LGLsllE~a~GrfP~-~~~~~~~---~-------~~~~Ll~~Iv~~ppP~lP~~-~fS  308 (364)
T KOG0581|consen  244 MSPER-ISGESYSVKSDIWS--LGLSLLELAIGRFPY-PPPNPPY---L-------DIFELLCAIVDEPPPRLPEG-EFS  308 (364)
T ss_pred             cChhh-hcCCcCCcccceec--ccHHHHHHhhCCCCC-CCcCCCC---C-------CHHHHHHHHhcCCCCCCCcc-cCC
Confidence            89999 99999999999999  999999999999999 4431110   0       11114556777777888432 589


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      +++++|+.+||+.||..|+++.++++|||++...
T Consensus       309 ~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  309 PEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE  342 (364)
T ss_pred             HHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence            9999999999999999999999999999998644

>KOG0033|consensus

Probab=99.76  E-value=6.5e-19  Score=122.56  Aligned_cols=98  Identities=21%  Similarity=0.400  Sum_probs=81.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch--hhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE--KEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~   78 (133)
                      |+||+ +....|+.++|||+  .|+++|.++.|.+|| ++++...                ++..+.....+++.  ...
T Consensus       179 maPEv-vrkdpy~kpvDiW~--cGViLfiLL~G~~PF-~~~~~~r----------------lye~I~~g~yd~~~~~w~~  238 (355)
T KOG0033|consen  179 LSPEV-LKKDPYSKPVDIWA--CGVILYILLVGYPPF-WDEDQHR----------------LYEQIKAGAYDYPSPEWDT  238 (355)
T ss_pred             cCHHH-hhcCCCCCcchhhh--hhHHHHHHHhCCCCC-CCccHHH----------------HHHHHhccccCCCCcccCc
Confidence            79999 99999999999999  999999999999999 7755443                55545544455543  356


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLAS  118 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~  118 (133)
                      +++++++++++||..||.+|.|+.|+|+|||+......++
T Consensus       239 is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As  278 (355)
T KOG0033|consen  239 VTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRERVAS  278 (355)
T ss_pred             CCHHHHHHHHHHhccChhhhccHHHHhCCchhcchHHHHH
Confidence            8999999999999999999999999999999986554433

>KOG0579|consensus

Probab=99.75  E-value=3.8e-18  Score=131.46  Aligned_cols=112  Identities=32%  Similarity=0.524  Sum_probs=100.4

Q ss_pred             CCCccccC----CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchh
Q psy9738           1 MAPEGGHH----RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEK   76 (133)
Q Consensus         1 maPE~~~~----~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (133)
                      ||||+..+    +..|+.++||||  +|+.+.+|..+.+|- +..++++               .+..+....+|.+..|
T Consensus       197 MAPEVvmCET~KD~PYDykaDiWS--lGITLIEMAqiEPPH-helnpMR---------------VllKiaKSePPTLlqP  258 (1187)
T KOG0579|consen  197 MAPEVVMCETFKDQPYDYKADIWS--LGITLIEMAQIEPPH-HELNPMR---------------VLLKIAKSEPPTLLQP  258 (1187)
T ss_pred             ccchheeeccccCCCchhhhhHHh--hhhHHHHHhccCCCc-cccchHH---------------HHHHHhhcCCCcccCc
Confidence            89998443    568999999999  999999999999999 7777777               7888888889999888


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHHh
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAA  130 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~~  130 (133)
                      ...+..+.||+..||..+|..||+++++++|||+....+..-+..|+.+++.-|
T Consensus       259 S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~SnK~ireLlAEakAeV  312 (1187)
T KOG0579|consen  259 SHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSNKMIRELLAEAKAEV  312 (1187)
T ss_pred             chhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcchHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999888888889888877544

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.74  E-value=3.8e-18  Score=122.61  Aligned_cols=111  Identities=65%  Similarity=1.028  Sum_probs=87.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. +....++.++|+|+  +|++++++++|..|| ...+...               ....+.....+.+..+...+
T Consensus       182 ~~PE~-~~~~~~~~~~Dv~s--lG~ll~~ll~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  242 (293)
T cd06647         182 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMVEGEPPY-LNENPLR---------------ALYLIATNGTPELQNPEKLS  242 (293)
T ss_pred             cCchh-hccCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCChhh---------------heeehhcCCCCCCCCccccC
Confidence            57998 66677888999999  999999999999999 5443322               11111122223333344567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHHh
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAA  130 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~~  130 (133)
                      ..+++++.+||..+|++||++.+++.|+||+.....+++.|++.+++++-
T Consensus       243 ~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~  292 (293)
T cd06647         243 AIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSLTPLIAAAKEAT  292 (293)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcccccccchHHHhhhcc
Confidence            88999999999999999999999999999999999999999999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0574|consensus

Probab=99.74  E-value=6.2e-19  Score=125.92  Aligned_cols=110  Identities=33%  Similarity=0.551  Sum_probs=100.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +..-+|+.++||||  +|+...+|..|++|| ..-++.+               .++.+...++|.+..|...+
T Consensus       196 MAPEV-I~EIGY~~~ADIWS--LGITaIEMAEG~PPY-sDIHPMR---------------AIFMIPT~PPPTF~KPE~WS  256 (502)
T KOG0574|consen  196 MAPEV-IEEIGYDTKADIWS--LGITAIEMAEGRPPY-SDIHPMR---------------AIFMIPTKPPPTFKKPEEWS  256 (502)
T ss_pred             ccHHH-HHHhccchhhhHhh--hcchhhhhhcCCCCc-ccccccc---------------eeEeccCCCCCCCCChHhhh
Confidence            89999 98999999999999  999999999999999 7777777               67777778888888888899


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEA  129 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~  129 (133)
                      .++-+|+++||...|++|.|+.++++|+|++.+..-.-+..+|.++++.
T Consensus       257 ~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~~I~~~~I~~A~e~  305 (502)
T KOG0574|consen  257 SEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGCDIMQLMIQDAQEK  305 (502)
T ss_pred             hHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcccHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999888889999998754

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.73  E-value=4.1e-18  Score=122.68  Aligned_cols=113  Identities=64%  Similarity=1.024  Sum_probs=90.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      |+||. +....++.++|+||  +|++++++++|..|| .+.+...               ....+.....+.+..+...+
T Consensus       182 ~aPE~-~~~~~~~~~~Dv~s--lGvil~~lltg~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  242 (296)
T cd06655         182 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMVEGEPPY-LNENPLR---------------ALYLIATNGTPELQNPEKLS  242 (296)
T ss_pred             cCcch-hcCCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhcCCcccCCcccCC
Confidence            58998 77777889999999  999999999999999 5544322               22222222333333345678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHHhcC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKG  132 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~~~~  132 (133)
                      +.+.+++.+||..+|.+||++.+++.||||+.......+..++-.+++++++
T Consensus       243 ~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (296)
T cd06655         243 PIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLTPLILAAKEAMKS  294 (296)
T ss_pred             HHHHHHHHHHhhcChhhCCCHHHHhhChHhhhccccccCCccccchhhhhhh
Confidence            8999999999999999999999999999999999999999999999888765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0660|consensus

Probab=99.73  E-value=6.8e-18  Score=121.91  Aligned_cols=108  Identities=22%  Similarity=0.277  Sum_probs=76.8

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhh----------HHhhHHHHHHHhhhCCCC
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYL----------FILSCRQALYLIATNKKP   71 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~   71 (133)
                      |||+++....|+..+||||  +||+++||++|++.| .|.+...+...|-.+          .+.+....-+.......+
T Consensus       195 APElll~~~~Yt~aiDiWS--vGCI~AEmL~gkplF-pG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p  271 (359)
T KOG0660|consen  195 APELLLNSSEYTKAIDIWS--VGCILAEMLTGKPLF-PGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIP  271 (359)
T ss_pred             CHHHHhccccccchhhhhh--hhHHHHHHHcCCCCC-CCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCC
Confidence            7999888999999999999  999999999999999 877765533322222          111111111111111112


Q ss_pred             Ccchh---hhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          72 EIKEK---EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        72 ~~~~~---~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ..+..   ...++.+.+|+.+||.+||.+|+|++|+|+|||+..
T Consensus       272 ~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~  315 (359)
T KOG0660|consen  272 KQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP  315 (359)
T ss_pred             CCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence            22111   346789999999999999999999999999999975

>KOG0575|consensus

Probab=99.73  E-value=4.5e-18  Score=129.40  Aligned_cols=91  Identities=21%  Similarity=0.350  Sum_probs=76.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +...+++..+||||  +||++|.++.|++|| . .....               ..+..+....+.+  |..++
T Consensus       185 IAPEV-l~k~gHsfEvDiWS--lGcvmYtLL~G~PPF-e-tk~vk---------------ety~~Ik~~~Y~~--P~~ls  242 (592)
T KOG0575|consen  185 IAPEV-LNKSGHSFEVDIWS--LGCVMYTLLVGRPPF-E-TKTVK---------------ETYNKIKLNEYSM--PSHLS  242 (592)
T ss_pred             cChhH-hccCCCCCchhhhh--hhhHHHhhhhCCCCc-c-cchHH---------------HHHHHHHhcCccc--ccccC
Confidence            58999 88999999999999  999999999999999 3 33233               3444444555566  66899


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ..+++||.++|..+|..|||++++|.|+||+..
T Consensus       243 ~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  243 AEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG  275 (592)
T ss_pred             HHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence            999999999999999999999999999999543

>KOG0588|consensus

Probab=99.73  E-value=8e-18  Score=129.48  Aligned_cols=93  Identities=25%  Similarity=0.408  Sum_probs=80.5

Q ss_pred             CCCccccCCCCCC-CccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYG-PKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~-~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      .|||+ +.+..|. .++||||  +|+++|.+++|..||  +++..+               .+...+..+.+.|  |.++
T Consensus       178 A~PEI-V~G~pYdG~~sDVWS--CGVILfALLtG~LPF--dDdNir---------------~LLlKV~~G~f~M--Ps~I  235 (786)
T KOG0588|consen  178 AAPEI-VSGRPYDGRPSDVWS--CGVILFALLTGKLPF--DDDNIR---------------VLLLKVQRGVFEM--PSNI  235 (786)
T ss_pred             CCchh-hcCCCCCCCccccch--hHHHHHHHHhCCCCC--CCccHH---------------HHHHHHHcCcccC--CCcC
Confidence            37999 8888885 6899999  999999999999999  444444               5666677777888  7899


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                      ++++++||++||..||++|.|.+++++|||+.+..+
T Consensus       236 s~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~  271 (786)
T KOG0588|consen  236 SSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTS  271 (786)
T ss_pred             CHHHHHHHHHHhccCccccccHHHHhhCchhhcCCC
Confidence            999999999999999999999999999999987553

>KOG0577|consensus

Probab=99.72  E-value=9.4e-18  Score=128.30  Aligned_cols=113  Identities=35%  Similarity=0.608  Sum_probs=103.3

Q ss_pred             CCCcccc--CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGH--HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~--~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      ||||+++  ..++|+.++||||  +|+.-.++...++|+ .+.+...               .+|.|..+..|.+.. ..
T Consensus       189 MAPEVILAMDEGqYdgkvDvWS--LGITCIELAERkPPl-FnMNAMS---------------ALYHIAQNesPtLqs-~e  249 (948)
T KOG0577|consen  189 MAPEVILAMDEGQYDGKVDVWS--LGITCIELAERKPPL-FNMNAMS---------------ALYHIAQNESPTLQS-NE  249 (948)
T ss_pred             cchhHheeccccccCCccceee--ccchhhhhhhcCCCc-cCchHHH---------------HHHHHHhcCCCCCCC-ch
Confidence            8999955  5789999999999  999999999999999 7777776               899999999888863 56


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHHhcC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKG  132 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~~~~  132 (133)
                      .+..++.|++.||+.-|..|||.+++|.|+|+...++...+..+|.+.|+.|+.
T Consensus       250 WS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~tvi~dLIqRTKdaVrE  303 (948)
T KOG0577|consen  250 WSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPPTVIMDLIQRTKDAVRE  303 (948)
T ss_pred             hHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCchHHHHHHHHHHHHHHH
Confidence            789999999999999999999999999999999999999999999999999874

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.72  E-value=3e-17  Score=118.12  Aligned_cols=113  Identities=64%  Similarity=0.998  Sum_probs=88.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||. +....++.++|+|+  +|++++++++|..|| .......               ..........+....+..++
T Consensus       183 ~aPE~-~~~~~~~~~~Dv~s--~Gvil~~l~~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  243 (296)
T cd06654         183 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMIEGEPPY-LNENPLR---------------ALYLIATNGTPELQNPEKLS  243 (296)
T ss_pred             cCHHH-HcCCCCCccchHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------hHHHHhcCCCCCCCCccccC
Confidence            57898 66777888999999  999999999999999 5443322               22222222223333345678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHHhcC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKG  132 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~~~~  132 (133)
                      ..+.+++.+||..+|..||++.+++.|+|+........+.|+..++++...+
T Consensus       244 ~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (296)
T cd06654         244 AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKN  295 (296)
T ss_pred             HHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCCccccHHHHHHHHHHhcc
Confidence            8899999999999999999999999999999999988999999988776543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0582|consensus

Probab=99.71  E-value=1.2e-17  Score=123.79  Aligned_cols=99  Identities=29%  Similarity=0.494  Sum_probs=79.7

Q ss_pred             CCCcccc-CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCC-------C
Q psy9738           1 MAPEGGH-HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKP-------E   72 (133)
Q Consensus         1 maPE~~~-~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~   72 (133)
                      ||||++. ...+|+.++||||  ||+...|+.+|..|| ..-.+.+               .+.....+.+|       +
T Consensus       197 mAPEvl~q~~~GYdfKaDIwS--fGITA~ELA~G~aPf-~k~pPmk---------------vLl~tLqn~pp~~~t~~~~  258 (516)
T KOG0582|consen  197 MAPEVLMQQLHGYDFKADIWS--FGITACELAHGHAPF-SKYPPMK---------------VLLLTLQNDPPTLLTSGLD  258 (516)
T ss_pred             cChHHhhhcccCccchhhhhh--hhHHHHHHhcCCCCc-ccCChHH---------------HHHHHhcCCCCCcccccCC
Confidence            8999933 5678999999999  999999999999999 6555555               55555555555       2


Q ss_pred             cchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCC
Q psy9738          73 IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  117 (133)
Q Consensus        73 ~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~  117 (133)
                      ......++..++.|+..||+.||.+|||++++|.|+||+......
T Consensus       259 ~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~~  303 (516)
T KOG0582|consen  259 KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSKE  303 (516)
T ss_pred             hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccchh
Confidence            223356788999999999999999999999999999998766443

>KOG0610|consensus

Probab=99.71  E-value=2.5e-17  Score=121.03  Aligned_cols=94  Identities=21%  Similarity=0.351  Sum_probs=79.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+.+++..||.|+  +|+++|||++|..|| .|.+...               .+..+.. .+..++.....+
T Consensus       302 lAPEv-I~G~GHgsAVDWWt--fGIflYEmLyG~TPF-KG~~~~~---------------Tl~NIv~-~~l~Fp~~~~vs  361 (459)
T KOG0610|consen  302 LAPEV-IRGEGHGSAVDWWT--FGIFLYEMLYGTTPF-KGSNNKE---------------TLRNIVG-QPLKFPEEPEVS  361 (459)
T ss_pred             cccee-eecCCCCchhhHHH--HHHHHHHHHhCCCCc-CCCCchh---------------hHHHHhc-CCCcCCCCCcch
Confidence            59999 99999999999999  999999999999999 8877655               5555543 345554445678


Q ss_pred             HHHHHHHHHHhhhcccccCC----HHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRAS----ASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s----~~ell~h~~~~~~~  114 (133)
                      ..++|||+++|..||.+|..    +.|+.+||||++..
T Consensus       362 ~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVn  399 (459)
T KOG0610|consen  362 SAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVN  399 (459)
T ss_pred             hHHHHHHHHHhccChhhhhccccchHHhhcCccccCCC
Confidence            99999999999999999987    99999999998643

>KOG0593|consensus

Probab=99.69  E-value=4.7e-17  Score=116.00  Aligned_cols=103  Identities=26%  Similarity=0.439  Sum_probs=71.7

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHH---HHHhh-hCC---CCCcc
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQA---LYLIA-TNK---KPEIK   74 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~---~~~~~   74 (133)
                      |||.++.+.+|++++|||+  +||++.||++|.+.| .+.+...+.+.|-..    +...   ...+. +++   ...++
T Consensus       169 aPELLvGDtqYG~pVDiWA--iGCv~aEl~~G~pL~-PG~SDiDQLy~I~kt----LG~L~prhq~iF~~N~~F~Gv~lP  241 (396)
T KOG0593|consen  169 APELLVGDTQYGKPVDIWA--IGCVFAELLTGEPLW-PGRSDIDQLYLIRKT----LGNLIPRHQSIFSSNPFFHGVRLP  241 (396)
T ss_pred             ChhhhcccCcCCCcccchh--hhHHHHHHhcCCcCC-CCcchHHHHHHHHHH----HcccCHHHHHHhccCCceeeeecC
Confidence            7999778899999999999  999999999999999 887766622221110    0000   00000 000   00111


Q ss_pred             hh----------hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          75 EK----------EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        75 ~~----------~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      .+          ..++..+.+|+++||.+||.+|++++++|.|+||.
T Consensus       242 ~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd  288 (396)
T KOG0593|consen  242 EPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD  288 (396)
T ss_pred             CCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence            11          23556788999999999999999999999999994

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=1.2e-16  Score=113.25  Aligned_cols=108  Identities=37%  Similarity=0.649  Sum_probs=82.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. +.+..++.++|+|+  +|++++++++|..|| ...+...               ....+.....+.+.. ...+
T Consensus       165 ~~PE~-~~~~~~~~~sDv~s--lG~il~~l~tg~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~-~~~~  224 (274)
T cd06609         165 MAPEV-IKQSGYDEKADIWS--LGITAIELAKGEPPL-SDLHPMR---------------VLFLIPKNNPPSLEG-NKFS  224 (274)
T ss_pred             cChhh-hccCCCCchhhHHH--HHHHHHHHHhCCCCc-ccCchHH---------------HHHHhhhcCCCCCcc-cccC
Confidence            57998 66777899999999  999999999999999 5443322               223333333333321 1267


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKE  128 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~  128 (133)
                      ..+.+++.+||..+|++||+++++++||||+......-...+....|+
T Consensus       225 ~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~~~~~~~~~~  272 (274)
T cd06609         225 KPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKTSYLTLLIERIKK  272 (274)
T ss_pred             HHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcccHHHHHHHHHHh
Confidence            889999999999999999999999999999988877666666665554

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0615|consensus

Probab=99.68  E-value=1.1e-17  Score=122.81  Aligned_cols=95  Identities=25%  Similarity=0.321  Sum_probs=71.4

Q ss_pred             CCCccccCCCC---CCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc--h
Q psy9738           1 MAPEGGHHRKQ---YGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK--E   75 (133)
Q Consensus         1 maPE~~~~~~~---~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~   75 (133)
                      +|||+ +..++   |..++|+||  +||++|-+++|.+|| .+.....               .+...+..+.+.+.  .
T Consensus       345 vAPEV-l~~kg~~~~~~kVDiWS--lGcvLfvcLsG~pPF-S~~~~~~---------------sl~eQI~~G~y~f~p~~  405 (475)
T KOG0615|consen  345 VAPEV-LASKGVEYYPSKVDIWS--LGCVLFVCLSGYPPF-SEEYTDP---------------SLKEQILKGRYAFGPLQ  405 (475)
T ss_pred             cChhh-eecCCeecccchheeee--ccceEEEEeccCCCc-ccccCCc---------------cHHHHHhcCcccccChh
Confidence            58999 64443   345789999  999999999999999 4332222               13333333332221  2


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ...++.++.+|+..||..||+.|++++|+|+||||+.+.
T Consensus       406 w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  406 WDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             hhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            467899999999999999999999999999999999655

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.68  E-value=7.8e-17  Score=115.98  Aligned_cols=112  Identities=62%  Similarity=1.023  Sum_probs=87.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. +.+..++.++|+|+  +|++++++++|..|| .+.+...               ..........+....+...+
T Consensus       182 ~aPE~-~~~~~~~~~~Di~s--lGvil~~l~tg~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  242 (297)
T cd06656         182 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMVEGEPPY-LNENPLR---------------ALYLIATNGTPELQNPERLS  242 (297)
T ss_pred             cCHHH-HcCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCCcch---------------heeeeccCCCCCCCCccccC
Confidence            47888 66777888999999  999999999999999 5544333               22222222223332345677


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK  131 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~~~  131 (133)
                      ..+++|+.+||..+|+.||++.+++.||||+.......+...+..+++...
T Consensus       243 ~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (297)
T cd06656         243 AVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLTPLIIAAKEAIK  293 (297)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCchhcccccccccCHHHHHHHHHHh
Confidence            889999999999999999999999999999999999888888877776653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.67  E-value=7.2e-17  Score=107.80  Aligned_cols=93  Identities=23%  Similarity=0.331  Sum_probs=67.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC----CCcchh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK----PEIKEK   76 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~   76 (133)
                      ||||+ +.+..|+.++||||  +|+++|+|++|..|| ........              ....+.....    .....+
T Consensus        71 ~aPE~-~~~~~~~~~~DiwS--lG~il~elltg~~p~-~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~  132 (176)
T smart00750       71 MAPEV-IQGQSYTEKADIYS--LGITLYEALDYELPY-NEERELSA--------------ILEILLNGMPADDPRDRSNL  132 (176)
T ss_pred             cChHH-hcCCCCcchhhHHH--HHHHHHHHHhCCCCc-cccchhcH--------------HHHHHHHHhccCCccccccH
Confidence            79999 78888999999999  999999999999999 54433220              1111111111    111112


Q ss_pred             hhhcH--HHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          77 EKLSQ--IFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        77 ~~~~~--~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      ...+.  .+.+++.+||..+|.+||++.+++.|+|+.
T Consensus       133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            23333  689999999999999999999999999875

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.67  E-value=2.5e-16  Score=112.82  Aligned_cols=110  Identities=35%  Similarity=0.536  Sum_probs=81.5

Q ss_pred             CCCcccc----CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchh
Q psy9738           1 MAPEGGH----HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEK   76 (133)
Q Consensus         1 maPE~~~----~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (133)
                      ++||++.    ....++.++|+||  +|+++|+|++|..|| ...+...               ....+.....+....+
T Consensus       177 ~aPE~~~~~~~~~~~~~~~~Dv~s--lG~il~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~  238 (292)
T cd06644         177 MAPEVVMCETMKDTPYDYKADIWS--LGITLIEMAQIEPPH-HELNPMR---------------VLLKIAKSEPPTLSQP  238 (292)
T ss_pred             cCceeeccccccCCCCCchhhhHh--HHHHHHHHhcCCCCC-ccccHHH---------------HHHHHhcCCCccCCCC
Confidence            5789832    2344677899999  999999999999999 4433222               2222222222333334


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHH
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKE  128 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~  128 (133)
                      ...+..+.+++.+||..+|++||+++++++|||+........+..++.+++.
T Consensus       239 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~~~~~~~~~  290 (292)
T cd06644         239 SKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNRPLRELVAEAKA  290 (292)
T ss_pred             cccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccchhHHHHHHHhhc
Confidence            4567889999999999999999999999999999988888888888877763

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0605|consensus

Probab=99.66  E-value=8.6e-17  Score=121.13  Aligned_cols=93  Identities=28%  Similarity=0.441  Sum_probs=73.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (133)
                      ||||+ +.+++|+..+|.||  +||++|||+.|.+|| .++++..               ....+..-. ...++.....
T Consensus       355 iAPEV-ll~kgY~~~cDwWS--LG~ImyEmLvGyPPF-~s~tp~~---------------T~rkI~nwr~~l~fP~~~~~  415 (550)
T KOG0605|consen  355 IAPEV-LLGKGYGKECDWWS--LGCIMYEMLVGYPPF-CSETPQE---------------TYRKIVNWRETLKFPEEVDL  415 (550)
T ss_pred             cchHH-HhcCCCCccccHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHHHhhhccCCCcCcc
Confidence            79999 88889999999999  999999999999999 7776654               222222211 1223223456


Q ss_pred             cHHHHHHHHHHhhhcccccC---CHHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRA---SASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~---s~~ell~h~~~~~~  113 (133)
                      +.+++|||.+||. ||.+|.   +++|+..||||++.
T Consensus       416 s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v  451 (550)
T KOG0605|consen  416 SDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV  451 (550)
T ss_pred             cHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC
Confidence            7999999999999 999997   48999999999864

>KOG0198|consensus

Probab=99.66  E-value=2.5e-17  Score=119.29  Aligned_cols=94  Identities=33%  Similarity=0.520  Sum_probs=72.4

Q ss_pred             CCCccccCCC-CCCCccccchhHHHHHHHHHHhCCCCCCCCC-CCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhh
Q psy9738           1 MAPEGGHHRK-QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNE-NPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKE   77 (133)
Q Consensus         1 maPE~~~~~~-~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   77 (133)
                      ||||+ +..+ .-+..+||||  +||++.||++|.+|| ... ....               .+..+.... .|.+  +.
T Consensus       188 maPEv-i~~g~~~~~~sDiWS--lGCtVvEM~Tg~~PW-~~~~~~~~---------------~~~~ig~~~~~P~i--p~  246 (313)
T KOG0198|consen  188 MAPEV-IRNGEVARRESDIWS--LGCTVVEMLTGKPPW-SEFFEEAE---------------ALLLIGREDSLPEI--PD  246 (313)
T ss_pred             cCchh-hcCCCcCCccchhhh--cCCEEEeccCCCCcc-hhhcchHH---------------HHHHHhccCCCCCC--Cc
Confidence            89999 6543 2335899999  999999999999999 431 1111               344444433 3555  56


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                      .++.++++|+.+|+..+|..|||++++|.|||.+....
T Consensus       247 ~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  247 SLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             ccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence            78999999999999999999999999999999976443

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=1.8e-16  Score=112.74  Aligned_cols=106  Identities=30%  Similarity=0.540  Sum_probs=78.8

Q ss_pred             CCCcccc----CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchh
Q psy9738           1 MAPEGGH----HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEK   76 (133)
Q Consensus         1 maPE~~~----~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (133)
                      ++||.+.    ....++.++|+||  +|++++++++|..|| ...+...               ....+.....+.+..+
T Consensus       170 ~~PE~~~~~~~~~~~~~~~sDi~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~  231 (280)
T cd06611         170 MAPEVVACETFKDNPYDYKADIWS--LGITLIELAQMEPPH-HELNPMR---------------VLLKILKSEPPTLDQP  231 (280)
T ss_pred             cCHHHHhhcccCCCCCCccccHHH--HHHHHHHHHhCCCCc-ccCCHHH---------------HHHHHhcCCCCCcCCc
Confidence            5788722    2344677899999  999999999999999 5433222               2223333333333334


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHH
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIM  124 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~  124 (133)
                      ...+..+.+++.+||..+|..||++.++++|+|+........+.++|.
T Consensus       232 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~~~~~~~  279 (280)
T cd06611         232 SKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSDNKAIKDLLA  279 (280)
T ss_pred             ccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccchhHHHHHHhh
Confidence            567889999999999999999999999999999998877777777664

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0592|consensus

Probab=99.66  E-value=1.7e-16  Score=119.90  Aligned_cols=92  Identities=20%  Similarity=0.354  Sum_probs=76.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||+ +.++..++.+|||+  +||++|+|+.|.+|| .+.++..               ....|. ...+.+  +..++
T Consensus       254 VSPEl-L~~~~~~~~sDiWA--lGCilyQmlaG~PPF-ra~Neyl---------------iFqkI~-~l~y~f--p~~fp  311 (604)
T KOG0592|consen  254 VSPEL-LNDSPAGPSSDLWA--LGCILYQMLAGQPPF-RAANEYL---------------IFQKIQ-ALDYEF--PEGFP  311 (604)
T ss_pred             cCHHH-hcCCCCCcccchHH--HHHHHHHHhcCCCCC-ccccHHH---------------HHHHHH-HhcccC--CCCCC
Confidence            57999 88999999999999  999999999999999 7776543               333333 333445  56778


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      +.+++|++++|..||.+|+|++++.+||||.+..
T Consensus       312 ~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd  345 (604)
T KOG0592|consen  312 EDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD  345 (604)
T ss_pred             HHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence            9999999999999999999999999999998643

>KOG0598|consensus

Probab=99.66  E-value=1.4e-16  Score=115.38  Aligned_cols=91  Identities=29%  Similarity=0.451  Sum_probs=75.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+.+|+..+|.||  +|+++|+|++|.+|| .+.+...               ....+...+.+..  +..++
T Consensus       192 mAPEi-l~~~gy~~~vDWWs--LGillYeML~G~pPF-~~~~~~~---------------~~~~I~~~k~~~~--p~~ls  250 (357)
T KOG0598|consen  192 MAPEI-LLGKGYDKAVDWWS--LGILLYEMLTGKPPF-YAEDVKK---------------MYDKILKGKLPLP--PGYLS  250 (357)
T ss_pred             cChHH-HhcCCCCcccchHh--HHHHHHHHhhCCCCC-cCccHHH---------------HHHHHhcCcCCCC--CccCC
Confidence            89999 88889999999999  999999999999999 7666544               4445554442332  34589


Q ss_pred             HHHHHHHHHHhhhcccccC----CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA----SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~----s~~ell~h~~~~~  112 (133)
                      .++++++.++|..||.+|.    ++.++.+||||..
T Consensus       251 ~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~  286 (357)
T KOG0598|consen  251 EEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKG  286 (357)
T ss_pred             HHHHHHHHHHhccCHHHhcCCCCChHHhhcCccccc
Confidence            9999999999999999995    5888999999975

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.65  E-value=4e-16  Score=111.16  Aligned_cols=107  Identities=33%  Similarity=0.595  Sum_probs=76.7

Q ss_pred             CCCcccc----CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchh
Q psy9738           1 MAPEGGH----HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEK   76 (133)
Q Consensus         1 maPE~~~----~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (133)
                      |+||++.    ....++.++|+||  +|++++++++|.+|| ...+...               ....+.....+.+..+
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~Dv~s--lGvil~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~  231 (282)
T cd06643         170 MAPEVVMCETSKDRPYDYKADVWS--LGITLIEMAQIEPPH-HELNPMR---------------VLLKIAKSEPPTLAQP  231 (282)
T ss_pred             cCHhhccccCCCCCCCCccchhhh--HHHHHHHHccCCCCc-cccCHHH---------------HHHHHhhcCCCCCCCc
Confidence            5899832    2345678899999  999999999999999 5433222               2222322322333334


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHH
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAA  126 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~  126 (133)
                      ..++..+.+|+.+||..+|.+||++.++++|||++..... .+.+++.+.
T Consensus       232 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~-~~~~~~~~~  280 (282)
T cd06643         232 SRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSNK-PIRELIAEA  280 (282)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCCC-CHHHHHHhh
Confidence            5578899999999999999999999999999999876443 355555543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.65  E-value=2.4e-16  Score=112.77  Aligned_cols=102  Identities=40%  Similarity=0.690  Sum_probs=77.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. ..+..++.++|+||  +|++++++++|..|| ...+...               ....+.....+.+..+...+
T Consensus       182 ~aPE~-~~~~~~~~~~Dv~s--lGv~l~ell~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  242 (285)
T cd06648         182 MAPEV-ISRLPYGTEVDIWS--LGIMVIEMVDGEPPY-FNEPPLQ---------------AMKRIRDNLPPKLKNLHKVS  242 (285)
T ss_pred             cCHHH-hcCCCCCCcccHHH--HHHHHHHHHhCCCCC-cCCCHHH---------------HHHHHHhcCCCCCcccccCC
Confidence            57888 66777889999999  999999999999999 5544322               22222222223332233467


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTP  121 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~  121 (133)
                      ..+.+|+.+||..+|.+||++.++++|+|++...+...+.+
T Consensus       243 ~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~~~  283 (285)
T cd06648         243 PRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPSSIVP  283 (285)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHccCcccccCCCcchhcc
Confidence            89999999999999999999999999999998887665543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.65  E-value=3.2e-16  Score=111.82  Aligned_cols=106  Identities=20%  Similarity=0.271  Sum_probs=66.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhh--HH-hhHHHHHHHhh---hCCCCCcc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYL--FI-LSCRQALYLIA---TNKKPEIK   74 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~---~~~~~~~~   74 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|++|| .+.+.......+...  .+ .+.........   ....+...
T Consensus       168 ~aPE~-~~~~~~~~~~Diws--lGvil~el~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (287)
T cd07848         168 RSPEL-LLGAPYGKAVDMWS--VGCILGELSDGQPLF-PGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVN  243 (287)
T ss_pred             CCcHH-HcCCCCCCchhHHh--HHHHHHHHHhCCCCC-CCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCccc
Confidence            68999 77778899999999  999999999999999 543321100000000  00 00000000000   00000000


Q ss_pred             h--------hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          75 E--------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        75 ~--------~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      .        ...++..+.+|+++||..||.+|+|++++++||||
T Consensus       244 ~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         244 HPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             CcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            0        12357789999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.64  E-value=3e-16  Score=112.75  Aligned_cols=106  Identities=42%  Similarity=0.723  Sum_probs=81.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||. .....++.++|+||  +|++++++++|..|| .......               ....+.....+........+
T Consensus       185 ~aPE~-~~~~~~~~~~Dv~s--lGvil~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  245 (292)
T cd06658         185 MAPEV-ISRLPYGTEVDIWS--LGIMVIEMIDGEPPY-FNEPPLQ---------------AMRRIRDNLPPRVKDSHKVS  245 (292)
T ss_pred             cCHHH-HccCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhcCCCccccccccC
Confidence            58898 67778889999999  999999999999999 5433222               12222222222222234567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMA  125 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~  125 (133)
                      ..+.+|+.+|+..+|.+||++.++++||||..........+++..
T Consensus       246 ~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~~~~~~~~~  290 (292)
T cd06658         246 SVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPSCIVPLMRQ  290 (292)
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCccccchhhhh
Confidence            889999999999999999999999999999998888888877654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>PTZ00284 protein kinase; Provisional

Probab=99.64  E-value=3.2e-16  Score=119.42  Aligned_cols=109  Identities=15%  Similarity=0.169  Sum_probs=67.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCccc-------chhhHH----hhHHHHHHHhhhCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFL-------IPYLFI----LSCRQALYLIATNK   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~-------~~~~~~----~~~~~~~~~~~~~~   69 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|+.|| .+.+.......       ++....    ......+.......
T Consensus       312 ~APE~-~~~~~~~~~~DiwS--lGvil~elltG~~pf-~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  387 (467)
T PTZ00284        312 RSPEV-VLGLGWMYSTDMWS--MGCIIYELYTGKLLY-DTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQL  387 (467)
T ss_pred             cCcHH-hhcCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccc
Confidence            69999 77888999999999  999999999999999 54332110000       000000    00000000000000


Q ss_pred             CCCcch-------------hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          70 KPEIKE-------------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        70 ~~~~~~-------------~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      .+....             .....+.+.+||.+||++||.+|+|+.++|+||||...
T Consensus       388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~  444 (467)
T PTZ00284        388 RPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY  444 (467)
T ss_pred             cccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence            000000             00124567899999999999999999999999999863

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.63  E-value=3.2e-16  Score=114.12  Aligned_cols=90  Identities=22%  Similarity=0.436  Sum_probs=71.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +||++++|++|..|| .+.+..                ............+  +..++
T Consensus       162 ~aPE~-~~~~~~~~~~DiwS--lG~il~elltg~~Pf-~~~~~~----------------~~~~~~~~~~~~~--p~~~~  219 (323)
T cd05571         162 LAPEV-LEDNDYGRAVDWWG--LGVVMYEMMCGRLPF-YNQDHE----------------KLFELILMEEIRF--PRTLS  219 (323)
T ss_pred             cChhh-hcCCCCCccccCcc--cchhhhhhhcCCCCC-CCCCHH----------------HHHHHHHcCCCCC--CCCCC
Confidence            68999 87888999999999  999999999999999 543321                1222222223333  45678


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      +.+.+|+.+||..||.+|+     ++.++++||||..
T Consensus       220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~  256 (323)
T cd05571         220 PEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFAS  256 (323)
T ss_pred             HHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            9999999999999999999     8999999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.63  E-value=5.7e-16  Score=110.67  Aligned_cols=91  Identities=24%  Similarity=0.349  Sum_probs=66.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC------------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN------------   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------   68 (133)
                      ||||+ +....++.++|+||  +|+++++|++|.+|| .+.....               ....+...            
T Consensus       176 ~aPE~-~~~~~~~~~~Diws--lG~il~el~~g~~~f-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  236 (290)
T cd07862         176 RAPEV-LLQSSYATPVDLWS--VGCIFAEMFRRKPLF-RGSSDVD---------------QLGKILDVIGLPGEEDWPRD  236 (290)
T ss_pred             cChHH-HhCCCCCCccchHH--HHHHHHHHHcCCCCc-CCCCHHH---------------HHHHHHHHhCCCChhhchhh
Confidence            68999 77778999999999  999999999999999 5443221               11111000            


Q ss_pred             ----------CC-CCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          69 ----------KK-PEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        69 ----------~~-~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                                .. ..+. .....+..+++++.+||+.||++|||+.++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         237 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             hcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence                      00 0000 012356788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.62  E-value=7.6e-16  Score=107.83  Aligned_cols=91  Identities=36%  Similarity=0.702  Sum_probs=69.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||+ +.+..++.++|+|+  +|++++++++|..|| .......               ....+.......+..+..++
T Consensus       166 ~~PE~-~~~~~~~~~~Di~s--~G~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  226 (256)
T cd06612         166 MAPEV-IQEIGYNNKADIWS--LGITAIEMAEGKPPY-SDIHPMR---------------AIFMIPNKPPPTLSDPEKWS  226 (256)
T ss_pred             cCHHH-HhcCCCCchhhHHH--HHHHHHHHHhCCCCC-CCcchhh---------------hhhhhccCCCCCCCchhhcC
Confidence            57898 77778888999999  999999999999999 4333222               12222222223333345567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+.+++.+|+..+|..||++.+++.||||
T Consensus       227 ~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         227 PEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            889999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.62  E-value=1e-15  Score=110.22  Aligned_cols=108  Identities=34%  Similarity=0.655  Sum_probs=82.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .......               ....+..............+
T Consensus       184 ~aPE~-~~~~~~~~~~Dv~s--lG~il~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  244 (297)
T cd06659         184 MAPEV-ISRTPYGTEVDIWS--LGIMVIEMVDGEPPY-FSDSPVQ---------------AMKRLRDSPPPKLKNAHKIS  244 (297)
T ss_pred             cCHHH-HccCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHhccCCCCccccCCCC
Confidence            58898 77777889999999  999999999999999 5433222               22222222222222234567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAK  127 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~  127 (133)
                      ..+.+|+.+||+.+|.+||+++++++|+||........+.++.....
T Consensus       245 ~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~~~~~~~~~~~~  291 (297)
T cd06659         245 PVLRDFLERMLTREPQERATAQELLDHPFLLQTGLPECLVPLIQQYR  291 (297)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCcccccchHHHHh
Confidence            88999999999999999999999999999998888888877776653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.62  E-value=1.1e-15  Score=109.47  Aligned_cols=95  Identities=22%  Similarity=0.330  Sum_probs=70.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| .+......            ..............+  +..++
T Consensus       168 ~aPE~-~~~~~~~~~~Dvws--lGvil~el~~g~~pf-~~~~~~~~------------~~~~~~~~~~~~~~~--~~~~s  229 (285)
T cd05631         168 MAPEV-INNEKYTFSPDWWG--LGCLIYEMIQGQSPF-RKRKERVK------------REEVDRRVKEDQEEY--SEKFS  229 (285)
T ss_pred             cCHhh-hcCCCCCcccCchh--HHHHHHHHHhCCCCC-CCCCcchh------------HHHHHHHhhcccccC--CccCC
Confidence            68999 77888999999999  999999999999999 54332210            001111111222222  34578


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~~  113 (133)
                      ..+.+|+.+||..||.+|++     ++++++||||...
T Consensus       230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~  267 (285)
T cd05631         230 EDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNI  267 (285)
T ss_pred             HHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence            89999999999999999996     8999999999763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0596|consensus

Probab=99.62  E-value=5.2e-16  Score=117.68  Aligned_cols=111  Identities=22%  Similarity=0.317  Sum_probs=73.8

Q ss_pred             CCCccccCC----------CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC-C
Q psy9738           1 MAPEGGHHR----------KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN-K   69 (133)
Q Consensus         1 maPE~~~~~----------~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   69 (133)
                      |+||.+...          -..+.++||||  +||++|+|+.|.+||  +.-..             .++.+..+... .
T Consensus       528 MsPEAl~~~~s~~~~~~~k~Ki~r~SDvWS--LGCILYqMvYgktPf--~~~~n-------------~~aKl~aI~~P~~  590 (677)
T KOG0596|consen  528 MSPEALTDMSSSRENGKSKIKISRKSDVWS--LGCILYQMVYGKTPF--GQIIN-------------QIAKLHAITDPNH  590 (677)
T ss_pred             cCHHHHhhccccccCCCcceeecCccchhh--hhhHHHHHHhcCCch--HHHHH-------------HHHHHHhhcCCCc
Confidence            789983321          12567899999  999999999999999  32211             11122222221 1


Q ss_pred             CCCcchhhhhcH-HHHHHHHHHhhhcccccCCHHHHhcCccccc-CCCCCChhHHHHHHHHHh
Q psy9738          70 KPEIKEKEKLSQ-IFQDFLDQCLEEEVETRASASLLLKHPFLKI-ARPLASLTPLIMAAKEAA  130 (133)
Q Consensus        70 ~~~~~~~~~~~~-~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~-~~~~~~~~~~~~~~~~~~  130 (133)
                      ...+  +...+. ++.++++.||..||.+|+++.++|+|||+.. .-..+....++....+.+
T Consensus       591 ~Ief--p~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i~~~~m~~~~~~~~k~~  651 (677)
T KOG0596|consen  591 EIEF--PDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPIPVEQMAKLTTNEMKYV  651 (677)
T ss_pred             cccc--cCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcccccccccchHHHHHHHHHHHhc
Confidence            1222  212222 3899999999999999999999999999987 555555566665554444

>KOG0616|consensus

Probab=99.62  E-value=4.7e-16  Score=110.42  Aligned_cols=91  Identities=24%  Similarity=0.478  Sum_probs=78.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +..++|+.++|.|+  +|+++|||+.|.+|| ...++..                ++..+......+  |+.++
T Consensus       208 LAPEi-i~sk~ynkavDWWa--lGVLIYEMlaG~pPF-~~~~~~~----------------iY~KI~~~~v~f--P~~fs  265 (355)
T KOG0616|consen  208 LAPEI-IQSKGYNKAVDWWA--LGVLIYEMLAGYPPF-YDDNPIQ----------------IYEKILEGKVKF--PSYFS  265 (355)
T ss_pred             cChHH-hhcCCCCcchhHHH--HHHHHHHHHcCCCCC-cCCChHH----------------HHHHHHhCcccC--CcccC
Confidence            69999 99999999999999  999999999999999 7777653                555555555666  77899


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~~  113 (133)
                      +++++|+.++|+.|-.+|.     ...++..||||++.
T Consensus       266 ~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v  303 (355)
T KOG0616|consen  266 SDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGV  303 (355)
T ss_pred             HHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccc
Confidence            9999999999999999993     56789999999853

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.62  E-value=8.7e-16  Score=112.17  Aligned_cols=90  Identities=20%  Similarity=0.417  Sum_probs=71.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...                ...........+  +...+
T Consensus       182 ~aPE~-~~~~~~~~~~Diws--lG~il~elltg~~pf-~~~~~~~----------------~~~~i~~~~~~~--p~~~~  239 (329)
T PTZ00263        182 LAPEV-IQSKGHGKAVDWWT--MGVLLYEFIAGYPPF-FDDTPFR----------------IYEKILAGRLKF--PNWFD  239 (329)
T ss_pred             cCHHH-HcCCCCCCcceeec--hHHHHHHHHcCCCCC-CCCCHHH----------------HHHHHhcCCcCC--CCCCC
Confidence            68999 77888899999999  999999999999999 5443222                222222333333  44578


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~  112 (133)
                      ..+++|+.+||..||.+|++     +.+++.||||+.
T Consensus       240 ~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~  276 (329)
T PTZ00263        240 GRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG  276 (329)
T ss_pred             HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence            88999999999999999986     799999999975

>KOG0597|consensus

Probab=99.62  E-value=2.1e-16  Score=120.40  Aligned_cols=92  Identities=23%  Similarity=0.337  Sum_probs=75.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||. +.+..|+..+|+||  +||++||++.|++|| ....-.+               ....|..+. +..  |...+
T Consensus       167 mAPEl-v~e~pyd~~sDlWs--lGcilYE~~~G~PPF-~a~si~~---------------Lv~~I~~d~-v~~--p~~~S  224 (808)
T KOG0597|consen  167 MAPEL-VEEQPYDHTSDLWS--LGCILYELYVGQPPF-YARSITQ---------------LVKSILKDP-VKP--PSTAS  224 (808)
T ss_pred             cCHHH-HcCCCccchhhHHH--HHHHHHHHhcCCCCc-hHHHHHH---------------HHHHHhcCC-CCC--ccccc
Confidence            89999 88999999999999  999999999999999 5433222               333343333 222  45789


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ..+.+|++..|..||.+|.++.+++.|||.++.-
T Consensus       225 ~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~  258 (808)
T KOG0597|consen  225 SSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKI  258 (808)
T ss_pred             HHHHHHHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence            9999999999999999999999999999997543

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.62  E-value=1.3e-15  Score=109.61  Aligned_cols=106  Identities=41%  Similarity=0.717  Sum_probs=80.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. +....++.++|+||  +|++++++++|..|| .+.....               ....+....+..+......+
T Consensus       183 ~~pE~-~~~~~~~~~~Dv~s--lGvil~el~tg~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  243 (292)
T cd06657         183 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK---------------AMKMIRDNLPPKLKNLHKVS  243 (292)
T ss_pred             cCHHH-hcCCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhhCCcccCCcccCC
Confidence            57888 66677888999999  999999999999999 5433222               12222222222322234467


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMA  125 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~  125 (133)
                      ..+.+++.+||..+|.+||++.+++.||||........+.+++..
T Consensus       244 ~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~~~~~~~~~~  288 (292)
T cd06657         244 PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPSCIVPLMRQ  288 (292)
T ss_pred             HHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCCcccccHHHH
Confidence            889999999999999999999999999999988887777777654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.62  E-value=8.7e-16  Score=110.04  Aligned_cols=107  Identities=21%  Similarity=0.224  Sum_probs=65.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhh---HHhhHHH------HHHHhhhCC--
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYL---FILSCRQ------ALYLIATNK--   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~--   69 (133)
                      ||||++.....++.++|+||  +|+++++|++|.+|| .+.+.......+...   .....+.      .........  
T Consensus       170 ~aPE~~~~~~~~~~~~Diws--lG~~l~~l~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (288)
T cd07871         170 RPPDVLLGSTEYSTPIDMWG--VGCILYEMATGRPMF-PGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYR  246 (288)
T ss_pred             cChHHhcCCcccCcHHHHHH--HHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccC
Confidence            68998344567899999999  999999999999999 544321100000000   0000000      000000000  


Q ss_pred             -CCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          70 -KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        70 -~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                       .+........+.++.+|+.+||..||.+|+|+.++++||||
T Consensus       247 ~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         247 AQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             CCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence             00000012356788999999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.62  E-value=9.4e-16  Score=109.44  Aligned_cols=103  Identities=50%  Similarity=0.844  Sum_probs=78.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. +.+..++.++|+|+  +|++++++++|..|| ...+...               ....+.....+.......++
T Consensus       183 ~~PE~-~~~~~~~~~~Dv~s--lGvil~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  243 (286)
T cd06614         183 MAPEV-IKRKDYGPKVDIWS--LGIMCIEMAEGEPPY-LREPPLR---------------ALFLITTKGIPPLKNPEKWS  243 (286)
T ss_pred             CCHhH-hcCCCCCCccccHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhcCCCCCcchhhCC
Confidence            57888 66777889999999  999999999999999 4433222               22222223333333334478


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPL  122 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~  122 (133)
                      ..+.+|+.+||..+|..||++.+++.|+||........+.++
T Consensus       244 ~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~~~~  285 (286)
T cd06614         244 PEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKEEFAPL  285 (286)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHhhChHhhccCchHhhhhc
Confidence            899999999999999999999999999999987777666554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.61  E-value=5.8e-16  Score=117.42  Aligned_cols=104  Identities=21%  Similarity=0.256  Sum_probs=67.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhH-----HHHHHHh----hhCCCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC-----RQALYLI----ATNKKP   71 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~----~~~~~~   71 (133)
                      ||||++.....|+.++|+||  +||++++|++|.+|| .+.+.... +    ..+...     .......    .....+
T Consensus       237 ~aPE~~~~~~~~~~~~DiwS--lGvil~elltG~~pf-~~~~~~~~-~----~~i~~~~~~p~~~~~~~~~~~~~~~~~~  308 (440)
T PTZ00036        237 RAPELMLGATNYTTHIDLWS--LGCIIAEMILGYPIF-SGQSSVDQ-L----VRIIQVLGTPTEDQLKEMNPNYADIKFP  308 (440)
T ss_pred             cCHHHhcCCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCChHHH-H----HHHHHHhCCCCHHHHHHhchhhhcccCC
Confidence            68998444557899999999  999999999999999 65433210 0    000000     0000000    000000


Q ss_pred             Ccc-------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          72 EIK-------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        72 ~~~-------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ...       .+...+.++.+|+.+||..||.+|+|+.++|.||||..
T Consensus       309 ~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~  356 (440)
T PTZ00036        309 DVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD  356 (440)
T ss_pred             ccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence            000       01235678999999999999999999999999999965

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.61  E-value=2.7e-15  Score=108.29  Aligned_cols=112  Identities=36%  Similarity=0.609  Sum_probs=83.3

Q ss_pred             CCCcccc--CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGH--HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~--~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      ||||++.  ....++.++|+|+  +|++++++++|..|| .+.+...               ....+.....+.+. +..
T Consensus       178 ~aPE~~~~~~~~~~~~~sDv~s--~G~il~el~tg~~p~-~~~~~~~---------------~~~~~~~~~~~~~~-~~~  238 (307)
T cd06607         178 MAPEVILAMDEGQYDGKVDVWS--LGITCIELAERKPPL-FNMNAMS---------------ALYHIAQNDSPTLS-SND  238 (307)
T ss_pred             cCceeeeccCCCCCCcccchHH--HHHHHHHHHcCCCCC-CCccHHH---------------HHHHHhcCCCCCCC-chh
Confidence            5899832  2456788999999  999999999999999 5443222               22333333333332 234


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK  131 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~~~  131 (133)
                      .+..+.+++.+||..+|+.||++.+++.|+|+........+.+++.+.+..++
T Consensus       239 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
T cd06607         239 WSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRERPPTVIIDLIQRTKDAVR  291 (307)
T ss_pred             hCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccCCcHHHHHHHHHHHHHhh
Confidence            67889999999999999999999999999999988877777777777665443

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.61  E-value=1.6e-15  Score=108.44  Aligned_cols=92  Identities=33%  Similarity=0.694  Sum_probs=68.0

Q ss_pred             CCCccccCCC-----CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch
Q psy9738           1 MAPEGGHHRK-----QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE   75 (133)
Q Consensus         1 maPE~~~~~~-----~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (133)
                      ++||+ +...     .++.++|+||  +|++++++++|+.|| ...+...               ....+.....+.+..
T Consensus       195 ~aPE~-~~~~~~~~~~~~~~~Di~s--lGvi~~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~  255 (291)
T cd06639         195 MAPEV-IACEQQYDYSYDARCDVWS--LGITAIELGDGDPPL-FDMHPVK---------------TLFKIPRNPPPTLLH  255 (291)
T ss_pred             cChhh-hcCCCCcccccCCccchHH--HHHHHHHHhhCCCCC-CCCcHHH---------------HHHHHhcCCCCCCCc
Confidence            57888 4322     3678999999  999999999999999 5433222               222232233333333


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      +......+.+++.+||..+|+.||++.++++||||+
T Consensus       256 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         256 PEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             ccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            445667899999999999999999999999999985

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.61  E-value=1.5e-15  Score=106.53  Aligned_cols=89  Identities=20%  Similarity=0.339  Sum_probs=69.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ .....++.++|+||  +|++++++++|+.|| ...+...               ....+.....+..  +...+
T Consensus       169 ~aPE~-~~~~~~~~~~Dv~s--lG~il~~l~~g~~~~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  227 (257)
T cd08223         169 MSPEL-FSNKPYNYKSDVWA--LGCCVYEMATLKHAF-NAKDMNS---------------LVYRIIEGKLPPM--PKDYS  227 (257)
T ss_pred             cChhH-hcCCCCCchhhhHH--HHHHHHHHHcCCCCC-CCCCHHH---------------HHHHHHhcCCCCC--ccccC
Confidence            58999 77778889999999  999999999999999 4332211               2223333333333  34578


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+.+|+.+|+..+|..||++.++++||||
T Consensus       228 ~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         228 PELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             HHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=1.2e-15  Score=110.61  Aligned_cols=91  Identities=22%  Similarity=0.357  Sum_probs=71.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+ ......+  +..++
T Consensus       160 ~aPE~-~~~~~~~~~~Dvws--lGvil~el~tg~~pf-~~~~~~~---------------~~~~~-~~~~~~~--~~~~~  217 (312)
T cd05585         160 LAPEL-LLGHGYTKAVDWWT--LGVLLYEMLTGLPPF-YDENVNE---------------MYRKI-LQEPLRF--PDGFD  217 (312)
T ss_pred             CCHHH-HcCCCCCCccceec--hhHHHHHHHhCCCCc-CCCCHHH---------------HHHHH-HcCCCCC--CCcCC
Confidence            68999 77888999999999  999999999999999 5433211               22222 2223333  45678


Q ss_pred             HHHHHHHHHHhhhcccccC---CHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRA---SASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~---s~~ell~h~~~~~~  113 (133)
                      +.+.+|+.+||..||.+|+   ++.+++.||||...
T Consensus       218 ~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         218 RDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             HHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence            9999999999999999997   58999999999853

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=1.1e-15  Score=109.80  Aligned_cols=90  Identities=23%  Similarity=0.384  Sum_probs=70.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+. .....+  +...+
T Consensus       165 ~aPE~-~~~~~~~~~~DiwS--lG~il~~l~~g~~pf-~~~~~~~---------------~~~~i~-~~~~~~--~~~~~  222 (291)
T cd05612         165 LAPEV-IQSKGHNKAVDWWA--LGILIYEMLVGYPPF-FDDNPFG---------------IYEKIL-AGKLEF--PRHLD  222 (291)
T ss_pred             cCHHH-HcCCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHH-hCCcCC--CccCC
Confidence            68999 77788899999999  999999999999999 5443222               222222 222333  44568


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~  112 (133)
                      ..+++++.+||..||.+|++     +++++.|+||..
T Consensus       223 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~  259 (291)
T cd05612         223 LYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS  259 (291)
T ss_pred             HHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence            89999999999999999995     999999999974

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=2.2e-15  Score=106.28  Aligned_cols=91  Identities=34%  Similarity=0.682  Sum_probs=68.2

Q ss_pred             CCCccccC-----CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch
Q psy9738           1 MAPEGGHH-----RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE   75 (133)
Q Consensus         1 maPE~~~~-----~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (133)
                      +|||+ +.     ...++.++|+|+  +|++++++++|..|| ...+...               ....+.....+.+..
T Consensus       180 ~aPE~-~~~~~~~~~~~~~~~Dv~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~  240 (275)
T cd06608         180 MAPEV-IACDEQPDASYDARSDVWS--LGITAIELADGKPPL-CDMHPMR---------------ALFKIPRNPPPTLKS  240 (275)
T ss_pred             cCHhH-hcccccccCCccccccHHH--hHHHHHHHHhCCCCc-cccchHH---------------HHHHhhccCCCCCCc
Confidence            57887 43     234677899999  999999999999999 5433222               233333333334433


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      +...+..+.+|+.+||..||++|||+.+++.|||+
T Consensus       241 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         241 PENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            44577899999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG0583|consensus

Probab=99.60  E-value=1.7e-15  Score=112.62  Aligned_cols=90  Identities=21%  Similarity=0.311  Sum_probs=73.0

Q ss_pred             CCCccccCCCC-CC-CccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHRKQ-YG-PKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~-~~-~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      +|||+ +.+.. |+ .++|+||  +|+++|.|++|..|| ...+. .               .++..+......+  |..
T Consensus       188 ~aPEv-l~~~~~Y~g~~aDvWS--~GViLy~ml~G~~PF-~d~~~-~---------------~l~~ki~~~~~~~--p~~  245 (370)
T KOG0583|consen  188 AAPEV-LSGKGTYSGKAADVWS--LGVILYVLLCGRLPF-DDSNV-P---------------NLYRKIRKGEFKI--PSY  245 (370)
T ss_pred             CCHHH-hCCCCCcCCchhhhhh--hHHHHHHHHhCCCCC-CCccH-H---------------HHHHHHhcCCccC--CCC
Confidence            69999 77766 86 6899999  999999999999999 44322 2               2333344444555  555


Q ss_pred             h-cHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          79 L-SQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        79 ~-~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      + ++++++++.+||..+|.+|+++.+++.||||+.
T Consensus       246 ~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  246 LLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             cCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            6 999999999999999999999999999999997

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.60  E-value=1.3e-15  Score=110.91  Aligned_cols=90  Identities=28%  Similarity=0.411  Sum_probs=70.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+. .....+  +...+
T Consensus       163 ~aPE~-~~~~~~~~~~Diws--lG~il~el~~g~~Pf-~~~~~~~---------------~~~~i~-~~~~~~--~~~~~  220 (320)
T cd05590         163 IAPEI-LQEMLYGPSVDWWA--MGVLLYEMLCGHAPF-EAENEDD---------------LFEAIL-NDEVVY--PTWLS  220 (320)
T ss_pred             cCHHH-HcCCCCCCccchhh--hHHHHHHHhhCCCCC-CCCCHHH---------------HHHHHh-cCCCCC--CCCCC
Confidence            68999 77888999999999  999999999999999 5443222               222222 222333  44578


Q ss_pred             HHHHHHHHHHhhhcccccCCH------HHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA------SLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~------~ell~h~~~~~  112 (133)
                      ..+.+++.+||..||.+|+++      ++++.||||..
T Consensus       221 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~  258 (320)
T cd05590         221 QDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE  258 (320)
T ss_pred             HHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCC
Confidence            899999999999999999998      89999999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.60  E-value=2.2e-15  Score=107.43  Aligned_cols=101  Identities=19%  Similarity=0.251  Sum_probs=65.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHH-----HH-HHhh--h----C
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ-----AL-YLIA--T----N   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~--~----~   68 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++|.+|| .+..... .+    ..+.....     .. ....  .    .
T Consensus       174 ~aPE~-~~~~~~~~~~Diws--lG~~l~~l~~g~~~f-~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (288)
T cd07863         174 RAPEV-LLQSTYATPVDMWS--VGCIFAEMFRRKPLF-CGNSEAD-QL----GKIFDLIGLPPEDDWPRDVTLPRGAFSP  244 (288)
T ss_pred             cCchH-hhCCCCCCcchhhh--HHHHHHHHHhCCcCc-CCCCHHH-HH----HHHHHHhCCCChhhCcccccccccccCC
Confidence            68999 77778999999999  999999999999999 4433211 00    00000000     00 0000  0    0


Q ss_pred             CCC-Ccc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          69 KKP-EIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        69 ~~~-~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+ ... .....+..+.+++.+||+.||.+|||+.+++.||||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         245 RGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             CCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            000 000 012356778999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.59  E-value=4.8e-15  Score=107.48  Aligned_cols=112  Identities=34%  Similarity=0.613  Sum_probs=81.6

Q ss_pred             CCCcccc--CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGH--HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~--~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      +|||++.  ....++.++|+||  +|++++++++|..|| ...+...               ....+.....+... ...
T Consensus       184 ~aPE~~~~~~~~~~~~~sDv~s--lGvil~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~-~~~  244 (313)
T cd06633         184 MAPEVILAMDEGQYDGKVDVWS--LGITCIELAERKPPL-FNMNAMS---------------ALYHIAQNDSPTLQ-SNE  244 (313)
T ss_pred             cChhhccccCCCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCChHH---------------HHHHHHhcCCCCCC-ccc
Confidence            5899832  2456788999999  999999999999999 5544333               23333333222221 234


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK  131 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~~~  131 (133)
                      .+..+++|+.+||+.+|.+||++.+++.||||........+...+....+.++
T Consensus       245 ~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (313)
T cd06633         245 WTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDRPARVLIDLIQRTKDAVR  297 (313)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCchhHHHHHHHHHHHHHHh
Confidence            56778999999999999999999999999999987766666666666655544

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0694|consensus

Probab=99.59  E-value=1.2e-15  Score=117.75  Aligned_cols=90  Identities=22%  Similarity=0.384  Sum_probs=75.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+..+|.|+  +|+++|+|+.|+.|| .+++..+               ....|... .+..  |..++
T Consensus       535 ~aPEi-l~e~~Yt~aVDWW~--lGVLlyeML~Gq~PF-~gddEee---------------~FdsI~~d-~~~y--P~~ls  592 (694)
T KOG0694|consen  535 LAPEV-LTEQSYTRAVDWWG--LGVLLYEMLVGESPF-PGDDEEE---------------VFDSIVND-EVRY--PRFLS  592 (694)
T ss_pred             cChhh-hccCcccchhhHHH--HHHHHHHHHcCCCCC-CCCCHHH---------------HHHHHhcC-CCCC--CCccc
Confidence            79999 99999999999999  999999999999999 7776554               34444433 3334  56789


Q ss_pred             HHHHHHHHHHhhhcccccCCH-----HHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA-----SLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~-----~ell~h~~~~~  112 (133)
                      .++.++++++|..+|.+|..+     +++..||||+.
T Consensus       593 ~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~  629 (694)
T KOG0694|consen  593 KEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRS  629 (694)
T ss_pred             HHHHHHHHHHhccCcccccCCCCCCchhhhhCCcccc
Confidence            999999999999999999854     77999999985

>KOG0032|consensus

Probab=99.59  E-value=4.2e-15  Score=110.83  Aligned_cols=93  Identities=25%  Similarity=0.502  Sum_probs=75.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc--hhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK--EKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   78 (133)
                      ||||+ +....|+..+|+||  +|+++|.|++|.+|| .+.....               ....+... .+.+.  ....
T Consensus       205 ~APEv-l~~~~y~~~~DiWS--~Gvi~yiLL~G~~PF-~~~~~~~---------------~~~~i~~~-~~~f~~~~w~~  264 (382)
T KOG0032|consen  205 VAPEV-LGGRPYGDEVDVWS--IGVILYILLSGVPPF-WGETEFE---------------IFLAILRG-DFDFTSEPWDD  264 (382)
T ss_pred             cCchh-hcCCCCCcccchhH--HHHHHHHHhhCCCCC-cCCChhH---------------HHHHHHcC-CCCCCCCCccc
Confidence            68999 88899999999999  999999999999999 7665443               23333322 22222  2356


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ++..+++|++.+|..||..|+++.++|+|||++..
T Consensus       265 is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  265 ISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             cCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence            78999999999999999999999999999999875

>KOG0983|consensus

Probab=99.59  E-value=1.9e-15  Score=106.82  Aligned_cols=96  Identities=23%  Similarity=0.448  Sum_probs=79.8

Q ss_pred             CCCccccC---CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCC-CCCCcccchhhHHhhHHHHHHHhhhCCCCCcchh
Q psy9738           1 MAPEGGHH---RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNEN-PLRPHFLIPYLFILSCRQALYLIATNKKPEIKEK   76 (133)
Q Consensus         1 maPE~~~~---~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (133)
                      ||||. +.   ...|+..+|+||  +|+.++|+.+|+.|| .+.+ .++               .+..+..+.+|.++.-
T Consensus       258 MaPER-idp~~~~kYDiRaDVWS--lGITlveLaTg~yPy-~~c~tdFe---------------~ltkvln~ePP~L~~~  318 (391)
T KOG0983|consen  258 MAPER-IDPPDKPKYDIRADVWS--LGITLVELATGQYPY-KGCKTDFE---------------VLTKVLNEEPPLLPGH  318 (391)
T ss_pred             cCccc-cCCCCCCccchhhhhhh--hccchhhhhcccCCC-CCCCccHH---------------HHHHHHhcCCCCCCcc
Confidence            89999 64   347899999999  999999999999999 5533 223               5666677777777655


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                      ..+++.+++|+..||..|+..||...++|+|||+.....
T Consensus       319 ~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~  357 (391)
T KOG0983|consen  319 MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYET  357 (391)
T ss_pred             cCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecch
Confidence            568999999999999999999999999999999986543

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.59  E-value=3e-15  Score=105.32  Aligned_cols=91  Identities=27%  Similarity=0.523  Sum_probs=67.6

Q ss_pred             CCCccccCCC-CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchh---
Q psy9738           1 MAPEGGHHRK-QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEK---   76 (133)
Q Consensus         1 maPE~~~~~~-~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   76 (133)
                      ++||+ +... .++.++|+|+  +|+++++|++|..|| ...+...               ..........+.+...   
T Consensus       173 ~~Pe~-~~~~~~~~~~~Dv~s--lG~i~~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~  233 (267)
T cd06610         173 MAPEV-MEQVHGYDFKADIWS--FGITAIELATGAAPY-SKYPPMK---------------VLMLTLQNDPPSLETGADY  233 (267)
T ss_pred             cChHH-HccccCcCcccchHh--HhHHHHHHHhCCCCc-cccChhh---------------hHHHHhcCCCCCcCCcccc
Confidence            57888 5444 7888999999  999999999999999 5443332               2222222222222111   


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..++..+.+++.+||..+|+.||++.+++.||||
T Consensus       234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         234 KKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             ccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            2567889999999999999999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.59  E-value=2e-15  Score=109.77  Aligned_cols=91  Identities=20%  Similarity=0.369  Sum_probs=70.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+..                ..........+.+  +...+
T Consensus       163 ~aPE~-~~~~~~~~~~Diws--lGvil~el~~g~~Pf-~~~~~~----------------~~~~~~~~~~~~~--~~~~~  220 (316)
T cd05620         163 IAPEI-LQGLKYTFSVDWWS--FGVLLYEMLIGQSPF-HGDDED----------------ELFESIRVDTPHY--PRWIT  220 (316)
T ss_pred             cCHHH-HcCCCCCcccchhh--hHHHHHHHHhCCCCC-CCCCHH----------------HHHHHHHhCCCCC--CCCCC
Confidence            68999 77888999999999  999999999999999 543321                1222222223333  34578


Q ss_pred             HHHHHHHHHHhhhcccccCCH-HHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASA-SLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~-~ell~h~~~~~~  113 (133)
                      .++++++.+||..||.+|+++ ++++.||||...
T Consensus       221 ~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~  254 (316)
T cd05620         221 KESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI  254 (316)
T ss_pred             HHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence            899999999999999999997 578899999753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.59  E-value=2e-15  Score=110.27  Aligned_cols=109  Identities=20%  Similarity=0.381  Sum_probs=70.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCC--cc---------cch------------------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRP--HF---------LIP------------------   51 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~--~~---------~~~------------------   51 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|+.|| ........  .+         ..+                  
T Consensus       169 ~aPE~-~~~~~~~~~~Diws--lG~il~el~tg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (331)
T cd06649         169 MSPER-LQGTHYSVQSDIWS--MGLSLVELAIGRYPI-PPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHG  244 (331)
T ss_pred             CCHhH-hcCCCCCchHhHHH--HHHHHHHHHhCCCCC-CCCCHHHHHHHhcccccccccCCccccCcccccccccccccc
Confidence            68999 77778999999999  999999999999999 43221000  00         000                  


Q ss_pred             --hhHHhhHHHHHHHhhhCCCCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          52 --YLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        52 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                        .............+.....+... ....+.++++|+.+||+.||++||++.++++||||+...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  308 (331)
T cd06649         245 MDSRPAMAIFELLDYIVNEPPPKLP-NGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE  308 (331)
T ss_pred             cccccchhHHHHHHHHHhCCCcCCC-CccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence              00000000011111222222221 124678899999999999999999999999999998644

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.59  E-value=2e-15  Score=109.81  Aligned_cols=91  Identities=22%  Similarity=0.384  Sum_probs=71.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|++++++++|..|| .+.+...               ....+ ......+  +...+
T Consensus       163 ~aPE~-~~~~~~~~~~Diws--lGvil~~l~~G~~pf-~~~~~~~---------------~~~~i-~~~~~~~--~~~~~  220 (318)
T cd05570         163 IAPEI-LSYQPYGPAVDWWA--LGVLLYEMLAGQSPF-EGDDEDE---------------LFQSI-LEDEVRY--PRWLS  220 (318)
T ss_pred             cCHHH-hcCCCCCcchhhhh--HHHHHHHHhhCCCCC-CCCCHHH---------------HHHHH-HcCCCCC--CCcCC
Confidence            68999 77888999999999  999999999999999 5433221               22222 2222333  34578


Q ss_pred             HHHHHHHHHHhhhcccccCCH-----HHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASA-----SLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~-----~ell~h~~~~~~  113 (133)
                      ..+.+|+.+||..||.+|+++     .+++.||||+..
T Consensus       221 ~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         221 KEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             HHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            899999999999999999999     999999999763

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.59  E-value=3e-15  Score=105.64  Aligned_cols=89  Identities=34%  Similarity=0.562  Sum_probs=68.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. +.+..++.++|+|+  +|++++++++|..|| ...+...               ....+.....+.+  +...+
T Consensus       179 ~~pe~-~~~~~~~~~~Dv~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  237 (267)
T cd06628         179 MAPEV-VKQTSYTRKADIWS--LGCLVVEMLTGKHPF-PDCTQLQ---------------AIFKIGENASPEI--PSNIS  237 (267)
T ss_pred             cChhH-hccCCCCchhhhHH--HHHHHHHHhhCCCCC-CCccHHH---------------HHHHHhccCCCcC--CcccC
Confidence            47888 76777888999999  999999999999999 5432221               2222222222333  34568


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+.+++.+||+.+|.+||++.++++|+||
T Consensus       238 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         238 SEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             HHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.59  E-value=3.4e-15  Score=106.25  Aligned_cols=91  Identities=38%  Similarity=0.699  Sum_probs=66.7

Q ss_pred             CCCccccC----CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchh
Q psy9738           1 MAPEGGHH----RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEK   76 (133)
Q Consensus         1 maPE~~~~----~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (133)
                      +|||++..    ...++.++|+||  +|++++++++|..|| ....+..               ....+.....+.+. .
T Consensus       188 ~aPE~l~~~~~~~~~~~~~~Dvws--lG~~l~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~-~  248 (282)
T cd06636         188 MAPEVIACDENPDATYDYRSDIWS--LGITAIEMAEGAPPL-CDMHPMR---------------ALFLIPRNPPPKLK-S  248 (282)
T ss_pred             cCHhhcCcccCcCcCCCcccchhH--HHHHHHHHHhCCCCc-cccCHHh---------------hhhhHhhCCCCCCc-c
Confidence            57898332    345788899999  999999999999999 4433222               12222222222221 2


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ...+..+.+|+.+||..+|.+||++.++++||||
T Consensus       249 ~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         249 KKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             cccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            3568899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.59  E-value=4.1e-15  Score=108.41  Aligned_cols=90  Identities=24%  Similarity=0.437  Sum_probs=71.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|++++++++|..|| .+.+...               ....+ ......+  +..++
T Consensus       162 ~aPE~-~~~~~~~~~~DiwS--lGvil~ell~g~~Pf-~~~~~~~---------------~~~~~-~~~~~~~--p~~~~  219 (323)
T cd05595         162 LAPEV-LEDNDYGRAVDWWG--LGVVMYEMMCGRLPF-YNQDHER---------------LFELI-LMEEIRF--PRTLS  219 (323)
T ss_pred             CCccc-ccCCCCCchhchhh--hHHHHHHHHhCCCCC-CCCCHHH---------------HHHHH-hcCCCCC--CCCCC
Confidence            68999 77888999999999  999999999999999 5433221               22222 2222333  44678


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      +.+.+++.+||..||.+|+     ++.++++|+||..
T Consensus       220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~  256 (323)
T cd05595         220 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  256 (323)
T ss_pred             HHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCC
Confidence            9999999999999999998     8999999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.59  E-value=3e-15  Score=109.34  Aligned_cols=90  Identities=22%  Similarity=0.434  Sum_probs=70.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|++++++++|..|| .+.+...                ...........+  +..++
T Consensus       162 ~aPE~-~~~~~~~~~~Diws--lGvil~elltG~~Pf-~~~~~~~----------------~~~~~~~~~~~~--p~~~~  219 (328)
T cd05593         162 LAPEV-LEDNDYGRAVDWWG--LGVVMYEMMCGRLPF-YNQDHEK----------------LFELILMEDIKF--PRTLS  219 (328)
T ss_pred             cChhh-hcCCCCCccCCccc--cchHHHHHhhCCCCC-CCCCHHH----------------HHHHhccCCccC--CCCCC
Confidence            68999 77788999999999  999999999999999 5433221                112222222333  45678


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      +.+.+|+.+||..||.+|+     ++.++++|+||..
T Consensus       220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~  256 (328)
T cd05593         220 ADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTG  256 (328)
T ss_pred             HHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence            9999999999999999997     8999999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0607|consensus

Probab=99.59  E-value=4.6e-15  Score=106.78  Aligned_cols=109  Identities=21%  Similarity=0.310  Sum_probs=90.4

Q ss_pred             CCCccccC-----CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch
Q psy9738           1 MAPEGGHH-----RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE   75 (133)
Q Consensus         1 maPE~~~~-----~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (133)
                      ||||+ +.     ..-|++.+|.||  +|+++|.|++|.+|| .+... .+.-..-+.++..|.+.+..-++++.+.+++
T Consensus       253 MAPEV-Vd~fv~qA~~YDKrCDlwS--LGvIlYImLsGYpPF-vG~Cg-~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPd  327 (463)
T KOG0607|consen  253 MAPEV-VDVFVDQATFYDKRCDLWS--LGVILYIMLSGYPPF-VGHCG-ADCGWDRGEVCRVCQNKLFESIQEGKYEFPD  327 (463)
T ss_pred             cchhH-HhhhccccccccccccHHH--HHHHHHHHHhCCCCc-cCccC-CcCCccCCCccHHHHHHHHHHHhccCCcCCh
Confidence            89998 52     346899999999  999999999999999 65443 4444445557888888888888888888865


Q ss_pred             h--hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          76 K--EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        76 ~--~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      .  ..++.+.++++..+|..|+.+|.++..+++|||++...
T Consensus       328 kdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~  368 (463)
T KOG0607|consen  328 KDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA  368 (463)
T ss_pred             hhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence            4  56899999999999999999999999999999997543

>KOG0661|consensus

Probab=99.58  E-value=2.9e-15  Score=111.86  Aligned_cols=110  Identities=20%  Similarity=0.238  Sum_probs=76.0

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhh------HHhhHHHHHHHhhhCCCCCcch
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYL------FILSCRQALYLIATNKKPEIKE   75 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~   75 (133)
                      |||+++..+.|+.++|+|+  +||+++|+.+-++.| .|.+...+.+-|+.+      ........+.....-.-+.+..
T Consensus       177 APEvLLrs~~Ys~pvD~wA--~GcI~aEl~sLrPLF-PG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~  253 (538)
T KOG0661|consen  177 APEVLLRSGYYSSPVDMWA--VGCIMAELYSLRPLF-PGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKP  253 (538)
T ss_pred             chHHhhhccccCCchHHHH--HHHHHHHHHHhcccC-CCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCC
Confidence            8999888999999999999  999999999999999 888776633322221      0000000111111001111100


Q ss_pred             ---h---hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          76 ---K---EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        76 ---~---~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                         .   ...+.++.+++.+||..||..||||.++|+||||+...
T Consensus       254 ~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~  298 (538)
T KOG0661|consen  254 SPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR  298 (538)
T ss_pred             CChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence               0   22578899999999999999999999999999998644

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.58  E-value=4.9e-15  Score=105.38  Aligned_cols=98  Identities=32%  Similarity=0.617  Sum_probs=74.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||. +.+..++.++|+||  +|+++++|++|..|| .......               ....+.....+.+  ....+
T Consensus       168 ~apE~-~~~~~~~~~~Dv~s--lG~il~el~tg~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  226 (277)
T cd06640         168 MAPEV-IQQSAYDSKADIWS--LGITAIELAKGEPPN-SDMHPMR---------------VLFLIPKNNPPTL--TGEFS  226 (277)
T ss_pred             cCHhH-hccCCCccHHHHHH--HHHHHHHHHHCCCCC-CCcChHh---------------HhhhhhcCCCCCC--chhhh
Confidence            57898 66777888999999  999999999999999 5433322               2222222223333  34567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCCh
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL  119 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~  119 (133)
                      ..+.+++.+||..+|++||++.+++.|+|+.......+.
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~  265 (277)
T cd06640         227 KPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKKTSY  265 (277)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHhChHhhhcchhhhH
Confidence            889999999999999999999999999999766655443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.58  E-value=3.7e-15  Score=106.39  Aligned_cols=95  Identities=23%  Similarity=0.335  Sum_probs=70.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|++++++++|+.|| ........           .. ............+  +..++
T Consensus       164 ~aPE~-~~~~~~~~~~Dvws--lG~il~el~~g~~pf-~~~~~~~~-----------~~-~~~~~~~~~~~~~--~~~~~  225 (280)
T cd05608         164 MAPEL-LQGEEYDFSVDYFA--LGVTLYEMIAARGPF-RARGEKVE-----------NK-ELKQRILNDSVTY--PDKFS  225 (280)
T ss_pred             cCHHH-hcCCCCCccccHHH--HHHHHHHHHhCCCCC-CCCCcchh-----------HH-HHHHhhcccCCCC--cccCC
Confidence            68999 77888999999999  999999999999999 44322110           00 1111111112222  34578


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~~  113 (133)
                      ..+.+++.+||..||++|+     ++++++.||||+..
T Consensus       226 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~  263 (280)
T cd05608         226 PASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL  263 (280)
T ss_pred             HHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence            8999999999999999999     88999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0604|consensus

Probab=99.58  E-value=5.2e-15  Score=105.57  Aligned_cols=98  Identities=18%  Similarity=0.325  Sum_probs=77.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch--hhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE--KEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~   78 (133)
                      .|||+ +....|+.++|+||  +|+++|.+++|.+|| ++.+...    +..        -+...+....+.++.  ...
T Consensus       230 vaPev-lg~eKydkscdmwS--lgVimYIlLCGyPPF-YS~hg~a----isp--------gMk~rI~~gqy~FP~pEWs~  293 (400)
T KOG0604|consen  230 VAPEV-LGPEKYDKSCDMWS--LGVIMYILLCGYPPF-YSNHGLA----ISP--------GMKRRIRTGQYEFPEPEWSC  293 (400)
T ss_pred             cCHHH-hCchhcCCCCCccc--hhHHHHHhhcCCCcc-cccCCcc----CCh--------hHHhHhhccCccCCChhHhH
Confidence            48999 88888999999999  999999999999999 7655422    000        223333344444443  467


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ++..++++++++|..+|.+|.|+.+++.|||+....
T Consensus       294 VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~  329 (400)
T KOG0604|consen  294 VSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE  329 (400)
T ss_pred             HHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence            899999999999999999999999999999997644

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.58  E-value=5.6e-15  Score=108.96  Aligned_cols=108  Identities=18%  Similarity=0.255  Sum_probs=67.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCC------cccchhhHH-hhHHHHHHHhhhCCC--C
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRP------HFLIPYLFI-LSCRQALYLIATNKK--P   71 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~--~   71 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+....      .+..+.... ..............+  +
T Consensus       189 ~aPE~-~~~~~~~~~~DiwS--lG~il~el~tg~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (359)
T cd07876         189 RAPEV-ILGMGYKENVDIWS--VGCIMGELVKGSVIF-QGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYP  264 (359)
T ss_pred             CCchh-ccCCCCCcchhhHH--HHHHHHHHHhCCCCC-CCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCC
Confidence            68999 77888999999999  999999999999999 54432110      000000000 000000000000000  0


Q ss_pred             Ccc---------------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          72 EIK---------------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        72 ~~~---------------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ...               .....+..+++|+.+||..||.+|||+.|+|.|||+..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         265 GISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             CcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence            000               01123567899999999999999999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.58  E-value=5.2e-15  Score=107.77  Aligned_cols=90  Identities=22%  Similarity=0.352  Sum_probs=70.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+... .+..  +..++
T Consensus       168 ~aPE~-~~~~~~~~~~Diws--lG~il~el~~G~~pf-~~~~~~~---------------~~~~i~~~-~~~~--p~~~~  225 (324)
T cd05589         168 LAPEV-LTETSYTRAVDWWG--LGVLIYEMLVGESPF-PGDDEEE---------------VFDSIVND-EVRY--PRFLS  225 (324)
T ss_pred             cCHhH-hcCCCCCcccchhh--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhC-CCCC--CCCCC
Confidence            68999 77788999999999  999999999999999 5433222               22222222 2223  34578


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      ..+.+++.+||..||.+|+     ++.++++||||+.
T Consensus       226 ~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~  262 (324)
T cd05589         226 REAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRD  262 (324)
T ss_pred             HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence            8899999999999999999     6899999999975

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.58  E-value=3.7e-15  Score=110.08  Aligned_cols=108  Identities=18%  Similarity=0.216  Sum_probs=67.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCccc------chhhH-HhhHHHHHHHhhhCCC--C
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFL------IPYLF-ILSCRQALYLIATNKK--P   71 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~--~   71 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++|..|| .+.+.......      .+... ...............+  .
T Consensus       192 ~aPE~-~~~~~~~~~~DiwS--lG~il~ell~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (364)
T cd07875         192 RAPEV-ILGMGYKENVDIWS--VGCIMGEMIKGGVLF-PGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYA  267 (364)
T ss_pred             CCHHH-HhCCCCCchhhHHh--HHHHHHHHHhCCCCC-CCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcC
Confidence            68999 77788999999999  999999999999999 54432110000      00000 0000000000000000  0


Q ss_pred             Cc---------------chhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          72 EI---------------KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        72 ~~---------------~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ..               ......+..+++|+.+||+.||.+|||+.++|+||||..
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             CCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence            00               001113467889999999999999999999999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.58  E-value=4.9e-15  Score=107.93  Aligned_cols=90  Identities=27%  Similarity=0.419  Sum_probs=70.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+.. ....+  +...+
T Consensus       167 ~aPE~-~~~~~~~~~~Diws--lG~il~ell~G~~pf-~~~~~~~---------------~~~~~~~-~~~~~--~~~~~  224 (323)
T cd05584         167 MAPEI-LMRSGHGKAVDWWS--LGALMYDMLTGAPPF-TAENRKK---------------TIDKILK-GKLNL--PPYLT  224 (323)
T ss_pred             cChhh-ccCCCCCCcceecc--cHHHHHHHhcCCCCC-CCCCHHH---------------HHHHHHc-CCCCC--CCCCC
Confidence            68999 77778899999999  999999999999999 5433221               2222222 22233  44578


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      +.+.+|+.+||..+|++|+     ++.+++.||||..
T Consensus       225 ~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~  261 (323)
T cd05584         225 PEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRH  261 (323)
T ss_pred             HHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence            8999999999999999999     8999999999975

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0603|consensus

Probab=99.57  E-value=3.6e-15  Score=114.31  Aligned_cols=87  Identities=21%  Similarity=0.337  Sum_probs=70.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      .|||+ +....|+..+|+||  +|+++|+|++|..|| . .++...              .+...+  ..+++  ...++
T Consensus       480 ~APEv-l~~~~yt~acD~WS--LGvlLy~ML~G~tp~-~-~~P~~~--------------ei~~~i--~~~~~--s~~vS  536 (612)
T KOG0603|consen  480 VAPEV-LAIQEYTEACDWWS--LGVLLYEMLTGRTLF-A-AHPAGI--------------EIHTRI--QMPKF--SECVS  536 (612)
T ss_pred             cChhh-hccCCCCcchhhHH--HHHHHHHHHhCCCcc-c-cCCchH--------------HHHHhh--cCCcc--ccccC
Confidence            38999 77889999999999  999999999999999 3 333220              222222  22333  25789


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+++++.+||+.||.+|+++.+++.|||+
T Consensus       537 ~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  537 DEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             HHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            999999999999999999999999999999

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.57  E-value=2.1e-15  Score=107.21  Aligned_cols=105  Identities=31%  Similarity=0.557  Sum_probs=75.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. +.+..++.++|+||  +|++++++++|..|+ .......               ....+.....+.+  ....+
T Consensus       168 ~aPE~-~~~~~~~~~~Dv~s--lG~il~el~tg~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  226 (277)
T cd06642         168 MAPEV-IKQSAYDFKADIWS--LGITAIELAKGEPPN-SDLHPMR---------------VLFLIPKNSPPTL--EGQYS  226 (277)
T ss_pred             cCHHH-hCcCCCchhhhHHH--HHHHHHHHHhCCCCC-cccchhh---------------HHhhhhcCCCCCC--CcccC
Confidence            57898 77777888999999  999999999999999 4333222               2222222222333  23567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCC-CChhHHHHHH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL-ASLTPLIMAA  126 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~-~~~~~~~~~~  126 (133)
                      ..+.+++.+|+..+|+.||++.+++.|+|+...... ..+..++...
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~~~~~~~~  273 (277)
T cd06642         227 KPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELIDRY  273 (277)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHhhhHHHHHHHHHHh
Confidence            889999999999999999999999999999764433 3334444444

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.57  E-value=3.2e-15  Score=109.93  Aligned_cols=91  Identities=18%  Similarity=0.303  Sum_probs=71.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+ ......+  +...+
T Consensus       195 ~aPE~-~~~~~~~~~~DiwS--lGvil~ell~G~~Pf-~~~~~~~---------------~~~~i-~~~~~~~--p~~~~  252 (340)
T PTZ00426        195 IAPEI-LLNVGHGKAADWWT--LGIFIYEILVGCPPF-YANEPLL---------------IYQKI-LEGIIYF--PKFLD  252 (340)
T ss_pred             cCHHH-HhCCCCCccccccc--hhhHHHHHhcCCCCC-CCCCHHH---------------HHHHH-hcCCCCC--CCCCC
Confidence            68999 77778899999999  999999999999999 5443322               12222 2222333  44578


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~~  113 (133)
                      ..+.+++++||..||.+|+     +++++++||||...
T Consensus       253 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        253 NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            8899999999999999995     89999999999753

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.57  E-value=3.5e-15  Score=107.57  Aligned_cols=99  Identities=16%  Similarity=0.281  Sum_probs=65.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-----------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-----------   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------   69 (133)
                      ||||++.....++.++|+||  +|+++++|++|..|| .+........          . .........           
T Consensus       170 ~aPE~~~~~~~~~~~~Diws--lG~il~~l~~g~~pf-~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~  235 (303)
T cd07869         170 RPPDVLLGSTEYSTCLDMWG--VGCIFVEMIQGVAAF-PGMKDIQDQL----------E-RIFLVLGTPNEDTWPGVHSL  235 (303)
T ss_pred             CChHHHcCCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCccHHHHH----------H-HHHHHhCCCChhhccchhhc
Confidence            68998334456888999999  999999999999999 5432211000          0 000000000           


Q ss_pred             ------------CCCcc---hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          70 ------------KPEIK---EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        70 ------------~~~~~---~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                                  +..+.   .....+..+.+|+.+||+.||.+|+|+.++++||||+..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~  294 (303)
T cd07869         236 PHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL  294 (303)
T ss_pred             cccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence                        00000   001134678899999999999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.57  E-value=8.7e-15  Score=105.94  Aligned_cols=107  Identities=15%  Similarity=0.161  Sum_probs=63.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCC-cc--cchhh-HHhh--------HHHHHH-----
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRP-HF--LIPYL-FILS--------CRQALY-----   63 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~-~~--~~~~~-~~~~--------~~~~~~-----   63 (133)
                      ||||++.....|+.++|+||  +||++++|++|.+|| .+...... ..  ..... .+..        .+....     
T Consensus       182 ~aPE~~~~~~~~~~~~Diws--lG~il~el~~g~~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (317)
T cd07868         182 RAPELLLGARHYTKAIDIWA--IGCIFAELLTSEPIF-HCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEH  258 (317)
T ss_pred             cCCHHHcCCCCcCchhhHHH--HHHHHHHHHhCCCCc-cCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccch
Confidence            68999334456899999999  999999999999999 54322110 00  00000 0000        000000     


Q ss_pred             -----HhhhCCC--CCcc---h--hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          64 -----LIATNKK--PEIK---E--KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        64 -----~~~~~~~--~~~~---~--~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                           .......  ..+.   .  ....+..+.+|+.+||..||.+|+|++++|+||||
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         259 STLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                 0000000  0000   0  01124568899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.57  E-value=6.7e-15  Score=103.51  Aligned_cols=89  Identities=29%  Similarity=0.492  Sum_probs=68.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-CCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .......               ....... ...+.+  +...
T Consensus       174 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~--~~~~  232 (263)
T cd06625         174 MSPEV-ISGEGYGRKADVWS--VGCTVVEMLTEKPPW-AEFEAMA---------------AIFKIATQPTNPQL--PSHV  232 (263)
T ss_pred             cCcce-eccCCCCchhhhHH--HHHHHHHHHhCCCCc-cccchHH---------------HHHHHhccCCCCCC--CccC
Confidence            58999 77777889999999  999999999999999 4432221               1222221 122233  4457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      +..+.+++.+||..+|.+||++.++++|+||
T Consensus       233 ~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         233 SPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             CHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            8899999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.57  E-value=6e-15  Score=107.76  Aligned_cols=99  Identities=20%  Similarity=0.287  Sum_probs=70.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|++++++++|..|| ...........    .   ...............+  +..++
T Consensus       163 ~aPE~-~~~~~~~~~~Diws--lG~~l~el~~g~~Pf-~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~--p~~~~  229 (329)
T cd05588         163 IAPEI-LRGEDYGFSVDWWA--LGVLMFEMMAGRSPF-DIVGMSDNPDQ----N---TEDYLFQVILEKQIRI--PRSLS  229 (329)
T ss_pred             cCHHH-HcCCCCCCccceec--hHHHHHHHHHCCCCc-ccccccccccc----c---chHHHHHHHHcCCCCC--CCCCC
Confidence            68999 77888999999999  999999999999999 32111000000    0   0001222223333334  45678


Q ss_pred             HHHHHHHHHHhhhcccccCC------HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS------ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s------~~ell~h~~~~~  112 (133)
                      ..+.+++.+||..||.+|++      +.+++.||||..
T Consensus       230 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         230 VKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            89999999999999999987      789999999974

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.57  E-value=6.8e-15  Score=103.78  Aligned_cols=89  Identities=33%  Similarity=0.588  Sum_probs=67.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC--CCCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN--KKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   78 (133)
                      ++||+ +.+..++.++|+|+  +|++++++++|..|| ...+...               ....+...  ..+.+  +..
T Consensus       175 ~~pe~-~~~~~~~~~~Dv~s--lG~~~~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~--~~~  233 (265)
T cd06631         175 MAPEV-INESGYGRKSDIWS--IGCTVFEMATGKPPL-ASMDRLA---------------AMFYIGAHRGLMPRL--PDS  233 (265)
T ss_pred             cChhh-hcCCCCcchhhHHH--HHHHHHHHHhCCCcc-ccCChHH---------------HHHHhhhccCCCCCC--CCC
Confidence            47898 77778889999999  999999999999999 4433221               11111111  11223  345


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      .+..+.+|+.+||..+|++||++.+++.||||
T Consensus       234 ~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         234 FSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             CCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            78889999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.57  E-value=4.2e-15  Score=108.33  Aligned_cols=108  Identities=22%  Similarity=0.404  Sum_probs=65.4

Q ss_pred             CCCccccCC--CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcc-----cchhhHHhhHHHHHHHhh-h-----
Q psy9738           1 MAPEGGHHR--KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHF-----LIPYLFILSCRQALYLIA-T-----   67 (133)
Q Consensus         1 maPE~~~~~--~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~-----   67 (133)
                      ||||+ +..  ..|+.++|+||  +|++++++++|..|| ..........     .++... ........... .     
T Consensus       175 ~aPE~-~~~~~~~~~~~~Diws--lG~il~el~~g~~pf-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  249 (327)
T cd08227         175 LSPEV-LQQNLQGYDAKSDIYS--VGITACELANGHVPF-KDMPATQMLLEKLNGTVPCLL-DTTTIPAEELTMKPSRSG  249 (327)
T ss_pred             cChHH-hhcccCCCCchhhHHH--HHHHHHHHHHCCCCC-CCcchhHHHHHHhcCCccccc-cccchhhhhcccCCcccC
Confidence            58999 543  46889999999  999999999999999 4322111000     000000 00000000000 0     


Q ss_pred             -------------CC----C-CCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          68 -------------NK----K-PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        68 -------------~~----~-~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                                   ..    . ...+.....++.+.+|+.+||+.||++|||++++++||||+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~  313 (327)
T cd08227         250 ANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  313 (327)
T ss_pred             CcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence                         00    0 0000012346788999999999999999999999999999753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.57  E-value=4.3e-15  Score=108.06  Aligned_cols=90  Identities=23%  Similarity=0.389  Sum_probs=70.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+.. .....  +...+
T Consensus       163 ~aPE~-~~~~~~~~~~Dvws--lG~il~el~tg~~Pf-~~~~~~~---------------~~~~i~~-~~~~~--p~~~~  220 (321)
T cd05591         163 IAPEI-LQELEYGPSVDWWA--LGVLMYEMMAGQPPF-EADNEDD---------------LFESILH-DDVLY--PVWLS  220 (321)
T ss_pred             cCHHH-HcCCCCCCccceec--hhHHHHHHhcCCCCC-CCCCHHH---------------HHHHHHc-CCCCC--CCCCC
Confidence            68999 77788999999999  999999999999999 5443222               2222222 22222  34568


Q ss_pred             HHHHHHHHHHhhhcccccC-------CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA-------SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-------s~~ell~h~~~~~  112 (133)
                      ..+.+++.+||..||.+|+       ++.++++||||..
T Consensus       221 ~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~  259 (321)
T cd05591         221 KEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE  259 (321)
T ss_pred             HHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence            8999999999999999999       8999999999965

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.56  E-value=4.4e-15  Score=107.98  Aligned_cols=91  Identities=21%  Similarity=0.350  Sum_probs=70.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+.. ..+.+  +...+
T Consensus       163 ~aPE~-~~~~~~~~~~Dvws--lG~il~el~~G~~pf-~~~~~~~---------------~~~~i~~-~~~~~--~~~~~  220 (316)
T cd05619         163 IAPEI-LLGQKYNTSVDWWS--FGVLLYEMLIGQSPF-HGHDEEE---------------LFQSIRM-DNPCY--PRWLT  220 (316)
T ss_pred             cCHHH-HcCCCCCchhhhhh--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHh-CCCCC--CccCC
Confidence            68999 77788999999999  999999999999999 5433221               2222222 22223  34578


Q ss_pred             HHHHHHHHHHhhhcccccCCHH-HHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASAS-LLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~-ell~h~~~~~~  113 (133)
                      ..+++++.+||..+|.+|+++. +++.||||+..
T Consensus       221 ~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05619         221 REAKDILVKLFVREPERRLGVKGDIRQHPFFREI  254 (316)
T ss_pred             HHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence            8899999999999999999996 89999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.56  E-value=5.6e-15  Score=104.49  Aligned_cols=90  Identities=38%  Similarity=0.720  Sum_probs=65.5

Q ss_pred             CCCccccC-----CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch
Q psy9738           1 MAPEGGHH-----RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE   75 (133)
Q Consensus         1 maPE~~~~-----~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (133)
                      +|||+ +.     ...|+.++|+||  +|++++++++|..|| .......               .............. 
T Consensus       178 ~aPE~-~~~~~~~~~~~~~~~Dv~s--lGv~l~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~-  237 (272)
T cd06637         178 MAPEV-IACDENPDATYDFKSDLWS--LGITAIEMAEGAPPL-CDMHPMR---------------ALFLIPRNPAPRLK-  237 (272)
T ss_pred             cCHhH-hccccCcCCCCCchhhHHH--HHHHHHHHHhCCCCc-cccCHHH---------------HHHHHhcCCCCCCC-
Confidence            57898 43     345788999999  999999999999999 4332221               11111112211211 


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ....+..+.+|+.+||..+|.+||++.+++.||||
T Consensus       238 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         238 SKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             CCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            23467889999999999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.56  E-value=1.7e-14  Score=106.26  Aligned_cols=96  Identities=26%  Similarity=0.369  Sum_probs=67.8

Q ss_pred             CCCccccC-----CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch
Q psy9738           1 MAPEGGHH-----RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE   75 (133)
Q Consensus         1 maPE~~~~-----~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (133)
                      ||||+ +.     +..++.++||||  +|+++++|++|+.|| .......            +......+.....+..  
T Consensus       235 ~aPE~-~~~~~~~~~~~~~~~Dvws--lGvil~el~~g~~pf-~~~~~~~------------~~~~~~~~~~~~~~~~--  296 (353)
T PLN00034        235 MSPER-INTDLNHGAYDGYAGDIWS--LGVSILEFYLGRFPF-GVGRQGD------------WASLMCAICMSQPPEA--  296 (353)
T ss_pred             cCccc-cccccccCcCCCcchhHHH--HHHHHHHHHhCCCCC-CCCCCcc------------HHHHHHHHhccCCCCC--
Confidence            58998 42     223356899999  999999999999999 4222111            0001112222222222  


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      +...+..+++|+.+||..||++||++.++++||||....
T Consensus       297 ~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~  335 (353)
T PLN00034        297 PATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ  335 (353)
T ss_pred             CCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence            345688999999999999999999999999999998754

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.56  E-value=5.6e-15  Score=103.65  Aligned_cols=89  Identities=16%  Similarity=0.260  Sum_probs=68.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ ..+..++.++|+||  +|++++++++|..|| .......               ....+.....+..  +...+
T Consensus       168 ~~pe~-~~~~~~~~~~Dv~s--lG~i~~~l~~g~~~~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  226 (256)
T cd08218         168 LSPEI-CENRPYNNKSDIWA--LGCVLYEMCTLKHAF-EAGNMKN---------------LVLKIIRGSYPPV--SSHYS  226 (256)
T ss_pred             cCHHH-hCCCCCCCccchhH--HHHHHHHHHcCCCCc-cCCCHHH---------------HHHHHhcCCCCCC--cccCC
Confidence            47888 66777888999999  999999999999999 4332211               2222333332333  34568


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+.+++.+||..+|..||++.++++||||
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         227 YDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             HHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence            899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.56  E-value=6.7e-15  Score=103.04  Aligned_cols=89  Identities=24%  Similarity=0.399  Sum_probs=69.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ .....++.++|+|+  +|++++++++|..|| ...+...               ....+.....+.+  +...+
T Consensus       168 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  226 (256)
T cd08529         168 LSPEL-CEDKPYNEKSDVWA--LGVVLYECCTGKHPF-DANNQGA---------------LILKIIRGVFPPV--SQMYS  226 (256)
T ss_pred             cCHHH-hcCCCCCCccchHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--ccccC
Confidence            57998 77777889999999  999999999999999 4433221               2223333333333  23567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+.+++.+|++.+|++||++.++++|||+
T Consensus       227 ~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         227 QQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence            889999999999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.56  E-value=4.6e-15  Score=108.08  Aligned_cols=109  Identities=17%  Similarity=0.266  Sum_probs=67.5

Q ss_pred             CCCccccCC--CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCc------ccchhh----HHhh--HHHHHHHhh
Q psy9738           1 MAPEGGHHR--KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPH------FLIPYL----FILS--CRQALYLIA   66 (133)
Q Consensus         1 maPE~~~~~--~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~------~~~~~~----~~~~--~~~~~~~~~   66 (133)
                      ||||+ +..  ..++.++|+||  +|+++++|++|.+|| .+.+.....      ...+..    .+..  .........
T Consensus       173 ~aPE~-~~~~~~~~~~~~DvwS--lGvvl~el~tg~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  248 (338)
T cd07859         173 RAPEL-CGSFFSKYTPAIDIWS--IGCIFAEVLTGKPLF-PGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMR  248 (338)
T ss_pred             CCHHH-HhccccccCchhHHHH--HHHHHHHHHcCCCCC-CCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhc
Confidence            58998 543  67889999999  999999999999999 544321100      000000    0000  000000011


Q ss_pred             hCCCCCcch-hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          67 TNKKPEIKE-KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        67 ~~~~~~~~~-~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ...+..+.. ....++.+.+++.+||..+|++||+++++++||||+..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~  296 (338)
T cd07859         249 KKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGL  296 (338)
T ss_pred             ccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhc
Confidence            111111100 02356788999999999999999999999999999753

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.56  E-value=6.5e-15  Score=107.25  Aligned_cols=90  Identities=20%  Similarity=0.323  Sum_probs=70.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|+.|| .+.+...               ....+. .....+  +...+
T Consensus       168 ~aPE~-~~~~~~~~~~Diws--lGvil~elltG~~pf-~~~~~~~---------------~~~~i~-~~~~~~--~~~~~  225 (324)
T cd05587         168 IAPEI-IAYQPYGKSVDWWA--FGVLLYEMLAGQPPF-DGEDEDE---------------LFQSIM-EHNVSY--PKSLS  225 (324)
T ss_pred             cChhh-hcCCCCCcccchhh--hHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHH-cCCCCC--CCCCC
Confidence            68999 77888999999999  999999999999999 5433221               222222 222333  44578


Q ss_pred             HHHHHHHHHHhhhcccccCCH-----HHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA-----SLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~-----~ell~h~~~~~  112 (133)
                      ..+.+++.+||..+|.+|++.     .++++||||..
T Consensus       226 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~  262 (324)
T cd05587         226 KEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR  262 (324)
T ss_pred             HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence            899999999999999999976     78999999975

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.56  E-value=1.5e-15  Score=110.62  Aligned_cols=90  Identities=22%  Similarity=0.442  Sum_probs=71.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...                ...........+  +...+
T Consensus       163 ~aPE~-~~~~~~~~~~Diws--lG~il~el~tG~~Pf-~~~~~~~----------------~~~~i~~~~~~~--p~~~~  220 (325)
T cd05594         163 LAPEV-LEDNDYGRAVDWWG--LGVVMYEMMCGRLPF-YNQDHEK----------------LFELILMEEIRF--PRTLS  220 (325)
T ss_pred             CCHHH-HccCCCCCcccccc--ccceeeeeccCCCCC-CCCCHHH----------------HHHHHhcCCCCC--CCCCC
Confidence            68999 77788999999999  999999999999999 5433221                222222222333  44678


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      +.+.+|+.+||..||.+|+     ++.++++|+||..
T Consensus       221 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~  257 (325)
T cd05594         221 PEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAG  257 (325)
T ss_pred             HHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCC
Confidence            8999999999999999997     8999999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.56  E-value=1.1e-14  Score=103.37  Aligned_cols=94  Identities=22%  Similarity=0.404  Sum_probs=68.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|++++++++|..|| .......  ..        .. ...... ......  +...+
T Consensus       173 ~aPE~-~~~~~~~~~~Dvws--lG~il~~l~~g~~p~-~~~~~~~--~~--------~~-~~~~~~-~~~~~~--~~~~~  234 (267)
T PHA03390        173 FSPEK-IKGHNYDVSFDWWA--VGVLTYELLTGKHPF-KEDEDEE--LD--------LE-SLLKRQ-QKKLPF--IKNVS  234 (267)
T ss_pred             cChhh-hcCCCCCchhhHHH--HHHHHHHHHHCCCCC-CCCCcch--hh--------HH-HHHHhh-cccCCc--ccccC
Confidence            58999 77778899999999  999999999999999 4322111  00        00 111111 111222  34678


Q ss_pred             HHHHHHHHHHhhhcccccCC-HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-~~ell~h~~~~~  112 (133)
                      +.+.+|+.+||+.+|..|++ ++++++||||+.
T Consensus       235 ~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        235 KNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             HHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence            99999999999999999996 699999999963

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.56  E-value=8.4e-15  Score=102.70  Aligned_cols=89  Identities=21%  Similarity=0.332  Sum_probs=69.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||+ +....++.++|+|+  +|++++++++|..|| ...+...               ....+.....+.+  +...+
T Consensus       177 ~~pE~-~~~~~~~~~~Dv~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  235 (265)
T cd08217         177 MSPEQ-LNHMSYDEKSDIWS--LGCLIYELCALSPPF-TARNQLQ---------------LASKIKEGKFRRI--PYRYS  235 (265)
T ss_pred             cChhh-hcCCCCCchhHHHH--HHHHHHHHHHCCCcc-cCcCHHH---------------HHHHHhcCCCCCC--ccccC
Confidence            57998 77777888999999  999999999999999 4433111               2222222223333  44678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+.+++.+||..+|.+||++.++++|||+
T Consensus       236 ~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         236 SELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            899999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.56  E-value=1.3e-14  Score=101.56  Aligned_cols=89  Identities=15%  Similarity=0.212  Sum_probs=68.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||. +.+..++.++|+||  +|++++++++|..|| .+.+...               ....+.......+  +...+
T Consensus       168 ~aPE~-~~~~~~~~~~Dv~s--lG~~l~~l~~~~~~~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  226 (256)
T cd08220         168 ISPEL-CEGKPYNQKSDIWA--LGCVLYELASLKRAF-EAANLPA---------------LVLKIMSGTFAPI--SDRYS  226 (256)
T ss_pred             cCchh-ccCCCCCcccchHH--HHHHHHHHHhCCCCc-ccCchHH---------------HHHHHHhcCCCCC--CCCcC
Confidence            58998 76777888999999  999999999999999 4433221               2222222222333  34568


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+.+++.+||..+|+.||++.++++|||+
T Consensus       227 ~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         227 PDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence            889999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.55  E-value=4.7e-15  Score=109.15  Aligned_cols=109  Identities=17%  Similarity=0.192  Sum_probs=67.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCccc------chh-hHHhhHHHHHHHhhhCCC---
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFL------IPY-LFILSCRQALYLIATNKK---   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~---   70 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+.......      .+. .................+   
T Consensus       185 ~aPE~-~~~~~~~~~~Diws--lG~il~el~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (355)
T cd07874         185 RAPEV-ILGMGYKENVDIWS--VGCIMGEMVRHKILF-PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA  260 (355)
T ss_pred             cCHHH-HcCCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccc
Confidence            68999 77788999999999  999999999999999 54332110000      000 000000000000000000   


Q ss_pred             -CCc-------------chhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          71 -PEI-------------KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        71 -~~~-------------~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                       ..+             ..+...+..+++|+.+||..||++|||+.++++||||+..
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         261 GLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             cccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence             000             0011234678899999999999999999999999999743

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.55  E-value=9.4e-15  Score=102.88  Aligned_cols=98  Identities=30%  Similarity=0.461  Sum_probs=71.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. +.+..++.++|+||  +|++++++++|..|| .........          .......+.....+.+. ....+
T Consensus       166 ~~PE~-~~~~~~~~~~Dv~s--lG~~l~~l~~g~~p~-~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~  230 (265)
T cd06605         166 MAPER-IQGNDYSVKSDIWS--LGLSLIELATGRFPY-PPENDPPDG----------IFELLQYIVNEPPPRLP-SGKFS  230 (265)
T ss_pred             cCHHH-HcCCCCCchhhHHH--HHHHHHHHHhCCCCC-Ccccccccc----------HHHHHHHHhcCCCCCCC-hhhcC
Confidence            57998 77778899999999  999999999999999 433211100          00022222333333332 12278


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ..+.+++.+||..+|.+||++.+++.||||+.-
T Consensus       231 ~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         231 PDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence            889999999999999999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.55  E-value=1.4e-14  Score=103.79  Aligned_cols=94  Identities=20%  Similarity=0.294  Sum_probs=68.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .......     ..       ..............  +...+
T Consensus       168 ~aPE~-~~~~~~~~~~Diws--lG~~l~~l~~g~~Pf-~~~~~~~-----~~-------~~~~~~~~~~~~~~--~~~~~  229 (285)
T cd05630         168 MAPEV-VKNERYTFSPDWWA--LGCLLYEMIAGQSPF-QQRKKKI-----KR-------EEVERLVKEVQEEY--SEKFS  229 (285)
T ss_pred             cChHH-HcCCCCCCccccHH--HHHHHHHHHhCCCCC-CCCCccc-----hH-------HHHHhhhhhhhhhc--CccCC
Confidence            68999 77778999999999  999999999999999 4432111     00       01111111111111  34567


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~  112 (133)
                      +.+.+|+.+||+.||..|+|     +.++++||||+.
T Consensus       230 ~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         230 PDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             HHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence            88999999999999999999     899999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.55  E-value=1.1e-14  Score=102.97  Aligned_cols=89  Identities=31%  Similarity=0.571  Sum_probs=66.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-CCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (133)
                      +|||. +.+..++.++|+||  +|++++++++|+.|| .......               ....... ...+.+  +...
T Consensus       176 ~aPE~-~~~~~~~~~~Dv~s--lG~i~~el~~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~--~~~~  234 (266)
T cd06651         176 MSPEV-ISGEGYGRKADVWS--LGCTVVEMLTEKPPW-AEYEAMA---------------AIFKIATQPTNPQL--PSHI  234 (266)
T ss_pred             cCHHH-hCCCCCCchhhhHH--HHHHHHHHHHCCCCc-cccchHH---------------HHHHHhcCCCCCCC--chhc
Confidence            57898 66777888999999  999999999999999 4332221               1222211 122333  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      +..+++++ +|+..+|++||++.++++||||+
T Consensus       235 ~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         235 SEHARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             CHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence            78888998 56678999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.55  E-value=7.8e-15  Score=106.81  Aligned_cols=90  Identities=17%  Similarity=0.289  Sum_probs=70.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+. .....+  +...+
T Consensus       168 ~aPE~-~~~~~~~~~~DiwS--lGvil~elltg~~Pf-~~~~~~~---------------~~~~i~-~~~~~~--p~~~s  225 (323)
T cd05616         168 IAPEI-IAYQPYGKSVDWWA--FGVLLYEMLAGQAPF-EGEDEDE---------------LFQSIM-EHNVAY--PKSMS  225 (323)
T ss_pred             cCHHH-hcCCCCCCccchhc--hhHHHHHHHhCCCCC-CCCCHHH---------------HHHHHH-hCCCCC--CCcCC
Confidence            68999 77888999999999  999999999999999 5443222               222222 222333  44678


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~  112 (133)
                      ..+.+++.+||..+|.+|++     ..++++|+||+.
T Consensus       226 ~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~  262 (323)
T cd05616         226 KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  262 (323)
T ss_pred             HHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence            89999999999999999997     478999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.55  E-value=8.3e-15  Score=105.85  Aligned_cols=108  Identities=19%  Similarity=0.256  Sum_probs=67.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchh-------h----HHhhHHHHHHHhhhCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPY-------L----FILSCRQALYLIATNK   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~~~~~   69 (133)
                      +|||++.....++.++|+||  +|+++++|++|..|| .+.+... .+....       .    .+.... .........
T Consensus       171 ~aPE~~~~~~~~~~~~Diws--lG~il~el~tg~~pf-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  245 (309)
T cd07872         171 RPPDVLLGSSEYSTQIDMWG--VGCIFFEMASGRPLF-PGSTVED-ELHLIFRLLGTPTEETWPGISSND-EFKNYNFPK  245 (309)
T ss_pred             cCCHHHhCCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCChHH-HHHHHHHHhCCCCHHHHhhhcchh-hhhhhhcCc
Confidence            58998344556888999999  999999999999999 5443211 000000       0    000000 000000000


Q ss_pred             C---CCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          70 K---PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        70 ~---~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      .   ........++.++++++.+||..||.+|+|+.++++||||+..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  292 (309)
T cd07872         246 YKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL  292 (309)
T ss_pred             cCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence            0   0000112457889999999999999999999999999999863

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.54  E-value=1.1e-14  Score=105.12  Aligned_cols=96  Identities=21%  Similarity=0.180  Sum_probs=67.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC------------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN------------   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------   68 (133)
                      +|||++.....++.++|+||  +|++++++++|.+|| .+.+...               ....+...            
T Consensus       175 ~aPE~~~~~~~~~~~~Dvws--lG~il~el~~g~~~f-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  236 (309)
T cd07845         175 RAPELLLGCTTYTTAIDMWA--VGCILAELLAHKPLL-PGKSEIE---------------QLDLIIQLLGTPNESIWPGF  236 (309)
T ss_pred             cChhhhcCCCCcCchHHHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHHhcCCCChhhchhh
Confidence            58998334456788999999  999999999999999 5433221               11111000            


Q ss_pred             ------CCCCcc--------h-hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          69 ------KKPEIK--------E-KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        69 ------~~~~~~--------~-~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                            ....+.        . ....++.+.+|+.+||..||++|||+.+++.||||+...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~  297 (309)
T cd07845         237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP  297 (309)
T ss_pred             hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence                  000000        0 012478889999999999999999999999999998543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.54  E-value=1e-14  Score=104.97  Aligned_cols=105  Identities=21%  Similarity=0.325  Sum_probs=66.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhH-----HHHHHHhhhC------C
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC-----RQALYLIATN------K   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~------~   69 (133)
                      ++||++.....++.++|+||  +|+++++|++|.+|| .+.+... ...    .+...     ..........      .
T Consensus       171 ~~PE~~~~~~~~~~~~Dv~s--lG~~l~el~tg~~~f-~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (301)
T cd07873         171 RPPDILLGSTDYSTQIDMWG--VGCIFYEMSTGRPLF-PGSTVEE-QLH----FIFRILGTPTEETWPGILSNEEFKSYN  242 (301)
T ss_pred             cCcHHHhCCCCCccHHHHHH--HHHHHHHHHhCCCCC-CCCCHHH-HHH----HHHHHcCCCChhhchhhhccccccccc
Confidence            57998334456788999999  999999999999999 5433211 000    00000     0000000000      0


Q ss_pred             CCCcc------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          70 KPEIK------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        70 ~~~~~------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      .+...      .....++.+++|+.+||..||.+|+|+.++++||||..-
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~  292 (301)
T cd07873         243 YPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL  292 (301)
T ss_pred             cCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            00000      012357788999999999999999999999999999753

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.54  E-value=1.6e-14  Score=105.80  Aligned_cols=110  Identities=18%  Similarity=0.212  Sum_probs=66.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccc------hhhH-HhhHH-HHHHHhhhCCCCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLI------PYLF-ILSCR-QALYLIATNKKPE   72 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~------~~~~-~~~~~-~~~~~~~~~~~~~   72 (133)
                      +|||++.....++.++||||  +|+++++|++|..|| .+.+.......+      +... ..... ........ ..+.
T Consensus       182 ~aPE~~~~~~~~~~~~Diws--lG~il~el~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  257 (343)
T cd07878         182 RAPEIMLNWMHYNQTVDIWS--VGCIMAELLKGKALF-PGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQ-SLPH  257 (343)
T ss_pred             cCchHhcCCccCCchhhhHh--HHHHHHHHHHCCCCC-CCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhh-cccc
Confidence            68999334467889999999  999999999999999 543321100000      0000 00000 00000000 0000


Q ss_pred             cch------hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          73 IKE------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        73 ~~~------~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ...      ....++.+.+|+.+||..||.+|+|+.+++.||||....
T Consensus       258 ~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~  305 (343)
T cd07878         258 MPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH  305 (343)
T ss_pred             ccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence            000      012356788999999999999999999999999997543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.54  E-value=2.9e-14  Score=103.48  Aligned_cols=112  Identities=36%  Similarity=0.613  Sum_probs=81.3

Q ss_pred             CCCcccc--CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGH--HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~--~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      +|||.+.  ..+.++.++|+||  +|++++++++|..|| .......               ....+.....+... ...
T Consensus       188 ~aPE~~~~~~~~~~~~~~Dv~s--lGvil~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~-~~~  248 (317)
T cd06635         188 MAPEVILAMDEGQYDGKVDVWS--LGITCIELAERKPPL-FNMNAMS---------------ALYHIAQNESPTLQ-SNE  248 (317)
T ss_pred             cChhhhhcCCCCCCCccccHHH--HHHHHHHHHhCCCCC-CCccHHH---------------HHHHHHhccCCCCC-Ccc
Confidence            5789833  3456788999999  999999999999999 5433222               23333333222221 234


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK  131 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~~~  131 (133)
                      .+..+++++.+||+.+|..||++.++++|+|+........+...+....+.++
T Consensus       249 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (317)
T cd06635         249 WSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPETVLIDLIQRTKDAVR  301 (317)
T ss_pred             ccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcccchhhHHHHHHHHHH
Confidence            67789999999999999999999999999999877776666666666555544

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=2.2e-14  Score=102.65  Aligned_cols=94  Identities=24%  Similarity=0.371  Sum_probs=69.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|++++++++|..|| .+.....            ...............+  +..++
T Consensus       168 ~aPE~-~~~~~~~~~~Diws--~G~~l~el~~g~~pf-~~~~~~~------------~~~~~~~~~~~~~~~~--~~~~~  229 (285)
T cd05605         168 MAPEV-VKNERYTFSPDWWG--LGCLIYEMIEGKSPF-RQRKEKV------------KREEVERRVKEDQEEY--SEKFS  229 (285)
T ss_pred             cCcHH-hcCCCCCccccchh--HHHHHHHHHHCCCCC-CCCchhh------------HHHHHHHHhhhccccc--CcccC
Confidence            68999 77778899999999  999999999999999 5433211            0001111111222222  34578


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      ..+.+++.+||..||.+|+     ++.++++|+||..
T Consensus       230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05605         230 EAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT  266 (285)
T ss_pred             HHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence            8899999999999999999     8999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.54  E-value=7.9e-15  Score=106.76  Aligned_cols=90  Identities=22%  Similarity=0.404  Sum_probs=70.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+..                ............+  +...+
T Consensus       163 ~aPE~-~~~~~~~~~~Dvws--lG~il~ell~g~~pf-~~~~~~----------------~~~~~i~~~~~~~--~~~~~  220 (323)
T cd05575         163 LAPEV-LRKQPYDRTVDWWC--LGAVLYEMLYGLPPF-YSRDTA----------------EMYDNILNKPLRL--KPNIS  220 (323)
T ss_pred             cChhh-hcCCCCCccccccc--cchhhhhhhcCCCCC-CCCCHH----------------HHHHHHHcCCCCC--CCCCC
Confidence            68999 77888999999999  999999999999999 543321                1222222233333  34568


Q ss_pred             HHHHHHHHHHhhhcccccCCH----HHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA----SLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~----~ell~h~~~~~  112 (133)
                      ..+.+++.+||+.||.+|+++    .+++.||||..
T Consensus       221 ~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~  256 (323)
T cd05575         221 VSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS  256 (323)
T ss_pred             HHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence            899999999999999999987    68999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.54  E-value=1.8e-14  Score=102.93  Aligned_cols=96  Identities=20%  Similarity=0.362  Sum_probs=69.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||.+..+..++.++|+||  +|++++++++|..|| ........             .............+  +...+
T Consensus       162 ~aPE~~~~~~~~~~~~Di~s--lG~~l~~l~~g~~pf-~~~~~~~~-------------~~~~~~~~~~~~~~--~~~~~  223 (279)
T cd05633         162 MAPEVLQKGTAYDSSADWFS--LGCMLFKLLRGHSPF-RQHKTKDK-------------HEIDRMTLTVNVEL--PDSFS  223 (279)
T ss_pred             cCHHHhcCCCCCCchhhhHH--HHHHHHHHHhCCCCc-CCCCCcCH-------------HHHHHHhhcCCcCC--ccccC
Confidence            58998333566889999999  999999999999999 44322210             01111111122233  34578


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~~~  114 (133)
                      ..+.+++.+||..||++|+     ++.++++||||++..
T Consensus       224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         224 PELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence            8999999999999999999     699999999998743

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.54  E-value=1e-14  Score=105.95  Aligned_cols=90  Identities=22%  Similarity=0.410  Sum_probs=70.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+ ....+.+  +..++
T Consensus       163 ~aPE~-~~~~~~~~~~Dvws--lG~il~ell~G~~Pf-~~~~~~~---------------~~~~i-~~~~~~~--~~~~~  220 (316)
T cd05592         163 IAPEI-LKGQKYNESVDWWS--FGVLLYEMLIGQSPF-HGEDEDE---------------LFDSI-LNDRPHF--PRWIS  220 (316)
T ss_pred             cCHHH-HcCCCCCCcccchh--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHH-HcCCCCC--CCCCC
Confidence            68999 77778999999999  999999999999999 5443221               22222 2223333  44578


Q ss_pred             HHHHHHHHHHhhhcccccCCH-HHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA-SLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~-~ell~h~~~~~  112 (133)
                      ..+.+++.+||..+|.+|+++ .+++.||||..
T Consensus       221 ~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~  253 (316)
T cd05592         221 KEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRG  253 (316)
T ss_pred             HHHHHHHHHHccCCHHHcCCChHHHHcCcccCC
Confidence            899999999999999999986 57889999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.54  E-value=1.9e-14  Score=102.38  Aligned_cols=105  Identities=31%  Similarity=0.557  Sum_probs=76.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. +....++.++|+||  +|++++++++|..|| .......               ....+.....+.+  +...+
T Consensus       168 ~~PE~-~~~~~~~~~~Dv~s--lG~~l~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  226 (277)
T cd06641         168 MAPEV-IKQSAYDSKADIWS--LGITAIELAKGEPPH-SELHPMK---------------VLFLIPKNNPPTL--EGNYS  226 (277)
T ss_pred             cChhh-hccCCCCchhhHHH--HHHHHHHHHcCCCCC-CccchHH---------------HHHHHhcCCCCCC--CcccC
Confidence            57888 66677788999999  999999999999999 4332221               2222222223333  34567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCC-hhHHHHHH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLAS-LTPLIMAA  126 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~-~~~~~~~~  126 (133)
                      ..+.+++.+||..+|.+||++.+++.||||.......+ +..+++..
T Consensus       227 ~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~~~~~~~~~~~~~~  273 (277)
T cd06641         227 KPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFAKKTSYLTELIDRY  273 (277)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhhhccchHHHHHHHh
Confidence            88999999999999999999999999999987654433 34444443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.54  E-value=6.9e-15  Score=104.97  Aligned_cols=95  Identities=23%  Similarity=0.418  Sum_probs=68.6

Q ss_pred             CCCccccCCC---CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch--
Q psy9738           1 MAPEGGHHRK---QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE--   75 (133)
Q Consensus         1 maPE~~~~~~---~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   75 (133)
                      +|||+ +...   .++.++|+||  +|++++++++|..|| .......              ...........+.+..  
T Consensus       174 ~aPE~-~~~~~~~~~~~~~Di~s--lG~il~el~~g~~p~-~~~~~~~--------------~~~~~~~~~~~~~~~~~~  235 (288)
T cd06616         174 MAPER-IDPSARDGYDVRSDVWS--LGITLYEVATGKFPY-PKWNSVF--------------DQLTQVVKGDPPILSNSE  235 (288)
T ss_pred             cCHHH-hccccccCCcchhhhhH--HHHHHHHHHhCCCCc-hhcchHH--------------HHHhhhcCCCCCcCCCcC
Confidence            57898 5444   6888999999  999999999999999 4332110              0122222222222211  


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      +...+..+.+|+.+||..+|++||++.+++.||||+..
T Consensus       236 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~  273 (288)
T cd06616         236 EREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY  273 (288)
T ss_pred             CCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence            12467889999999999999999999999999999763

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.54  E-value=1.5e-14  Score=100.51  Aligned_cols=90  Identities=41%  Similarity=0.726  Sum_probs=67.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. +....++.++|+|+  +|++++++++|..|| ...+...               ..........+.+......+
T Consensus       164 ~~PE~-~~~~~~~~~~Dv~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  224 (253)
T cd05122         164 MAPEV-INGKPYDYKADIWS--LGITAIELAEGKPPY-SELPPMK---------------ALFKIATNGPPGLRNPEKWS  224 (253)
T ss_pred             cCHHH-HcCCCCCccccHHH--HHHHHHHHHhCCCCC-CCCchHH---------------HHHHHHhcCCCCcCcccccC
Confidence            57888 66666788999999  999999999999999 4433222               22222223333333233347


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPF  109 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~  109 (133)
                      ..+.+++.+||..||+.||++.++++|||
T Consensus       225 ~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         225 DEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            88999999999999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.54  E-value=1.1e-14  Score=106.49  Aligned_cols=97  Identities=21%  Similarity=0.334  Sum_probs=70.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCC--CcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLR--PHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .......  ....         ..............+  +..
T Consensus       163 ~aPE~-~~~~~~~~~~Diws--lG~il~el~~g~~Pf-~~~~~~~~~~~~~---------~~~~~~~i~~~~~~~--p~~  227 (329)
T cd05618         163 IAPEI-LRGEDYGFSVDWWA--LGVLMFEMMAGRSPF-DIVGSSDNPDQNT---------EDYLFQVILEKQIRI--PRS  227 (329)
T ss_pred             cCHHH-HcCCCCCCccceec--ccHHHHHHhhCCCCC-ccCCCcCCccccc---------HHHHHHHHhcCCCCC--CCC
Confidence            68999 77888999999999  999999999999999 4211110  0000         001222222333334  456


Q ss_pred             hcHHHHHHHHHHhhhcccccCC------HHHHhcCccccc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRAS------ASLLLKHPFLKI  112 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s------~~ell~h~~~~~  112 (133)
                      .+..+.+++.+||..||.+|++      +.+++.||||+.
T Consensus       228 ~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~  267 (329)
T cd05618         228 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  267 (329)
T ss_pred             CCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            7889999999999999999998      579999999975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=1.6e-14  Score=101.42  Aligned_cols=90  Identities=37%  Similarity=0.762  Sum_probs=67.0

Q ss_pred             CCCccccCCC---CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC--CCCCcch
Q psy9738           1 MAPEGGHHRK---QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN--KKPEIKE   75 (133)
Q Consensus         1 maPE~~~~~~---~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~   75 (133)
                      ++||. +...   .++.++|+||  +|+++++|++|..|| ...+...               ....+...  ....+..
T Consensus       168 ~~Pe~-~~~~~~~~~~~~~Di~s--lG~~l~~~~tg~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~  228 (262)
T cd06613         168 MAPEV-AAVERKGGYDGKCDIWA--LGITAIELAELQPPM-FDLHPMR---------------ALFLISKSNFPPPKLKD  228 (262)
T ss_pred             cCchh-hcccccCCcCchhhhHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhccCCCccccc
Confidence            57998 6555   7788999999  999999999999999 5433222               22222222  2222222


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcc
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF  109 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~  109 (133)
                      ....+..+.+|+.+||..+|..||++++++.|+|
T Consensus       229 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         229 KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             hhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            3456788999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0599|consensus

Probab=99.54  E-value=9e-15  Score=103.49  Aligned_cols=92  Identities=24%  Similarity=0.467  Sum_probs=70.7

Q ss_pred             CCCcccc-----CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCc--
Q psy9738           1 MAPEGGH-----HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEI--   73 (133)
Q Consensus         1 maPE~~~-----~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   73 (133)
                      +|||.+-     ...+|+..+|+|+  +|+++|.++.|-+|| +...+.-               .+..+. .+.+.+  
T Consensus       189 LAPEtikC~m~e~~pGYs~EVD~Wa--~GVImyTLLaGcpPF-wHRkQml---------------MLR~Im-eGkyqF~s  249 (411)
T KOG0599|consen  189 LAPETIKCSMYENHPGYSKEVDEWA--CGVIMYTLLAGCPPF-WHRKQML---------------MLRMIM-EGKYQFRS  249 (411)
T ss_pred             cChhheeeecccCCCCccchhhHHH--HHHHHHHHHcCCCch-hHHHHHH---------------HHHHHH-hcccccCC
Confidence            5888822     2357889999999  999999999999999 6433222               223333 333333  


Q ss_pred             chhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          74 KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        74 ~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      ++..+++.+.++++.+||+.||.+|.|+.|+|.||||.
T Consensus       250 peWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~  287 (411)
T KOG0599|consen  250 PEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFI  287 (411)
T ss_pred             cchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence            33467899999999999999999999999999999993

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.54  E-value=1.2e-14  Score=105.97  Aligned_cols=94  Identities=22%  Similarity=0.330  Sum_probs=68.5

Q ss_pred             CCCccccCC-CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHR-KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~-~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+ ..++.++|+||  +|+++++|++|..|| .........           . ..........+.+  +..+
T Consensus       173 ~aPE~-~~~~~~~~~~~Diws--lG~il~elltg~~pf-~~~~~~~~~-----------~-~~~~~~~~~~~~~--~~~~  234 (332)
T cd05614         173 MAPEI-IRGKGGHGKAVDWWS--LGILIFELLTGASPF-TLEGERNTQ-----------S-EVSRRILKCDPPF--PSFI  234 (332)
T ss_pred             cCHHH-hcCCCCCCCcccccc--chhhhhhhhcCCCCC-CCCCCCCCH-----------H-HHHHHHhcCCCCC--CCCC
Confidence            68999 544 45788999999  999999999999999 433221100           0 1111112222333  3457


Q ss_pred             cHHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      +..+.+++.+||..||++|+     +++++++||||+.
T Consensus       235 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~  272 (332)
T cd05614         235 GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG  272 (332)
T ss_pred             CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            88999999999999999999     8889999999975

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.54  E-value=1.1e-14  Score=103.68  Aligned_cols=106  Identities=20%  Similarity=0.233  Sum_probs=64.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCccc----------chhhHHhhHHHHHHHhh-hCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFL----------IPYLFILSCRQALYLIA-TNK   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~   69 (133)
                      +|||++.....++.++|+||  +|++++++++|++|| .+.........          ..+....... ...... ...
T Consensus       168 ~aPE~~~~~~~~~~~~Dv~s--lG~il~~l~tg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  243 (285)
T cd07861         168 RAPEVLLGSPRYSTPVDIWS--IGTIFAEMATKKPLF-HGDSEIDQLFRIFRILGTPTEDVWPGVTSLP-DYKNTFPKWK  243 (285)
T ss_pred             cChHHhcCCCCcCcHHHHHH--HHHHHHHHHHCCCCC-CCCCHHHHHHHHHHHhCCCChhhhhcchhhH-HHHhhccccC
Confidence            58998334455788999999  999999999999999 54332110000          0000000000 000000 000


Q ss_pred             CCCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          70 KPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        70 ~~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..... ....+++++.+++.+||..||.+|||+.+++.||||
T Consensus       244 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         244 KGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             cchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            00000 012357888999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.54  E-value=2.9e-14  Score=103.11  Aligned_cols=110  Identities=35%  Similarity=0.628  Sum_probs=78.8

Q ss_pred             CCCcccc--CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGH--HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~--~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      +|||.+.  ....++.++|+||  +|++++++++|..|| .......               ....+.....+... ...
T Consensus       178 ~aPE~~~~~~~~~~~~~~Di~s--lG~il~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~-~~~  238 (308)
T cd06634         178 MAPEVILAMDEGQYDGKVDVWS--LGITCIELAERKPPL-FNMNAMS---------------ALYHIAQNESPALQ-SGH  238 (308)
T ss_pred             cCHHHHhhcccCCCCcccchHH--HHHHHHHHHcCCCCC-ccccHHH---------------HHHHHhhcCCCCcC-ccc
Confidence            5788832  2356788999999  999999999999998 5433222               22333322222221 235


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHH
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEA  129 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~  129 (133)
                      .+..+.+++.+||..+|..||++.+++.|+|+..........+.+....+.
T Consensus       239 ~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~  289 (308)
T cd06634         239 WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDA  289 (308)
T ss_pred             ccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCChhHHHHHHHHHHHH
Confidence            678899999999999999999999999999998877766665555554433

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.54  E-value=1.3e-14  Score=101.56  Aligned_cols=89  Identities=19%  Similarity=0.318  Sum_probs=67.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ .....++.++|+||  +|++++++++|..|| ...+...               ....+........  ....+
T Consensus       169 ~ape~-~~~~~~~~~~Dv~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  227 (257)
T cd08225         169 LSPEI-CQNRPYNNKTDIWS--LGCVLYELCTLKHPF-EGNNLHQ---------------LVLKICQGYFAPI--SPNFS  227 (257)
T ss_pred             cCHHH-HcCCCCCchhhHHH--HHHHHHHHHhCCCCC-CCccHHH---------------HHHHHhcccCCCC--CCCCC
Confidence            47888 66667888999999  999999999999999 4433221               2222222222222  23467


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+++++.+|+..+|++||++.+++.||||
T Consensus       228 ~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         228 RDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence            889999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=7.3e-15  Score=107.64  Aligned_cols=92  Identities=21%  Similarity=0.346  Sum_probs=69.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-CCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++||||  +||++++|++|..|| .......               ....+.. .....++....+
T Consensus       197 ~aPE~-~~~~~~~~~~DiwS--lG~il~ell~g~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~p~~~~~  257 (350)
T cd05573         197 IAPEV-LRGTPYGLECDWWS--LGVILYEMLYGFPPF-YSDTLQE---------------TYNKIINWKESLRFPPDPPV  257 (350)
T ss_pred             cCHHH-HcCCCCCCceeeEe--cchhhhhhccCCCCC-CCCCHHH---------------HHHHHhccCCcccCCCCCCC
Confidence            68999 77788999999999  999999999999999 5443221               1222221 011222212336


Q ss_pred             cHHHHHHHHHHhhhcccccCC-HHHHhcCccccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRAS-ASLLLKHPFLKI  112 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s-~~ell~h~~~~~  112 (133)
                      ++.+.+|+.+||. +|..|++ +.+++.||||+.
T Consensus       258 ~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~  290 (350)
T cd05573         258 SPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKG  290 (350)
T ss_pred             CHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence            8999999999997 9999999 999999999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.54  E-value=7.2e-15  Score=116.55  Aligned_cols=94  Identities=27%  Similarity=0.402  Sum_probs=70.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|..|| .+.....               ....+.....+.......++
T Consensus       547 ~APE~-l~~~~~~~~~DiwS--lG~il~ElltG~~pf-~~~~~~~---------------~~~~il~~~~~~p~~~~~~~  607 (669)
T cd05610         547 LAPEL-LLGKPHGPAVDWWA--LGVCLFEFLTGIPPF-NDETPQQ---------------VFQNILNRDIPWPEGEEKLS  607 (669)
T ss_pred             cCHHH-cCCCCCCcHHHHHH--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHhcCCCCCcccccCC
Confidence            68999 67788999999999  999999999999999 5433222               22222222111111123467


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ..+.+++..||..||.+||++.+++.||||...
T Consensus       608 ~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~~~~  640 (669)
T cd05610         608 VNAQNAIEILLTMDPTKRAGLKELKQHPLFHGV  640 (669)
T ss_pred             HHHHHHHHHHcccChhHCcCHHHHHhCHhhcCC
Confidence            888999999999999999999999999999753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.53  E-value=1.4e-14  Score=104.84  Aligned_cols=94  Identities=20%  Similarity=0.323  Sum_probs=71.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .+.+...               ....+. .....++.....+
T Consensus       199 ~aPE~-~~~~~~~~~~Di~s--lG~ll~~l~~g~~pf-~~~~~~~---------------~~~~~~-~~~~~~~~~~~~~  258 (316)
T cd05574         199 IAPEV-ISGDGHGSAVDWWT--LGILLYEMLYGTTPF-KGSNRDE---------------TFSNIL-KKEVTFPGSPPVS  258 (316)
T ss_pred             cCHHH-HcCCCCCchHHHHH--HHHHHHHHhhCCCCC-CCCchHH---------------HHHHHh-cCCccCCCccccC
Confidence            57898 77777888999999  999999999999999 5443222               222222 2222222223368


Q ss_pred             HHHHHHHHHHhhhcccccCC----HHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRAS----ASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s----~~ell~h~~~~~~~  114 (133)
                      ..+.+++.+||..+|+.||+    +.+++.||||+...
T Consensus       259 ~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~  296 (316)
T cd05574         259 SSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVN  296 (316)
T ss_pred             HHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCC
Confidence            89999999999999999999    99999999998643

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.53  E-value=4.2e-14  Score=100.77  Aligned_cols=101  Identities=24%  Similarity=0.459  Sum_probs=70.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| ........... +       ......+.....+.+. ....+
T Consensus       160 ~aPE~-~~~~~~~~~~Dvws--lG~~l~~l~~g~~pf-~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~-~~~~~  226 (279)
T cd06619         160 MAPER-ISGEQYGIHSDVWS--LGISFMELALGRFPY-PQIQKNQGSLM-P-------LQLLQCIVDEDPPVLP-VGQFS  226 (279)
T ss_pred             cCcee-ecCCCCCCcchHHH--HHHHHHHHHhCCCCc-hhhcccccccc-h-------HHHHHHHhccCCCCCC-CCcCC
Confidence            58999 77778899999999  999999999999999 43221110000 0       0011122222222221 23467


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      +.+.+|+.+||..+|..||++++++.||||+...
T Consensus       227 ~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~  260 (279)
T cd06619         227 EKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN  260 (279)
T ss_pred             HHHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence            8899999999999999999999999999997653

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.53  E-value=1.5e-14  Score=102.61  Aligned_cols=95  Identities=32%  Similarity=0.577  Sum_probs=69.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||.+..+..++.++|+|+  +|++++++++|..|| .+.....               ....+....++.+.. ...+
T Consensus       168 ~aPE~~~~~~~~~~~~Dv~s--lG~~l~~ll~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~-~~~~  228 (277)
T cd06917         168 MAPEVITEGKYYDTKADIWS--LGITIYEMATGNPPY-SDVDAFR---------------AMMLIPKSKPPRLED-NGYS  228 (277)
T ss_pred             eCHHHhccCCccccchhHHH--HHHHHHHHHhCCCCC-CCCChhh---------------hhhccccCCCCCCCc-ccCC
Confidence            47888333455788999999  999999999999999 4433222               111222222233321 2367


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ..+.+|+.+||..+|++||++.+++.|+|++...
T Consensus       229 ~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         229 KLLREFVAACLDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence            8899999999999999999999999999997644

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG4717|consensus

Probab=99.53  E-value=2.2e-14  Score=108.81  Aligned_cols=92  Identities=22%  Similarity=0.377  Sum_probs=75.6

Q ss_pred             CCccccCCCCCC-CccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           2 APEGGHHRKQYG-PKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         2 aPE~~~~~~~~~-~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      |||+ +.+..|+ +.+||||  +|+++|-+++|++|| ...+..+               .+..|. ...+.+  |...+
T Consensus       186 APEI-LLGDsYDAPAVDiWS--LGVILyMLVCGq~PF-qeANDSE---------------TLTmIm-DCKYtv--PshvS  243 (864)
T KOG4717|consen  186 APEI-LLGDSYDAPAVDIWS--LGVILYMLVCGQPPF-QEANDSE---------------TLTMIM-DCKYTV--PSHVS  243 (864)
T ss_pred             Cchh-hhcCccCCcchhhhH--HHHHHHHHHhCCCcc-ccccchh---------------hhhhhh-cccccC--chhhh
Confidence            7999 7777886 5799999  999999999999999 6555544               444443 333445  67889


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                      .+++++|..||+.||.+|.+.+++..|+|++....
T Consensus       244 ~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  244 KECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             HHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence            99999999999999999999999999999987553

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.53  E-value=1e-14  Score=108.07  Aligned_cols=110  Identities=23%  Similarity=0.293  Sum_probs=68.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccc------hhh-HHhh-HHHHHHHhhhCC--C
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLI------PYL-FILS-CRQALYLIATNK--K   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~------~~~-~~~~-~~~~~~~~~~~~--~   70 (133)
                      +|||++.....|+.++|+||  +||++++|++|..|| .+.+.......+      +.. .... .......+....  +
T Consensus       171 ~aPE~~~~~~~~~~~~Diws--lG~il~el~~g~~pf-~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  247 (372)
T cd07853         171 RAPEILMGSRHYTSAVDIWS--VGCIFAELLGRRILF-QAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKP  247 (372)
T ss_pred             CCHHHHcCCCCCCcHHHHHh--HHHHHHHHHcCCCCC-CCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCC
Confidence            58998333456888999999  999999999999999 554332100000      000 0000 000000111111  1


Q ss_pred             CCcc----hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          71 PEIK----EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        71 ~~~~----~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      +...    .....+..+.+|+.+||..||.+|||+.++++||||...
T Consensus       248 ~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         248 PSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             CchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence            1110    012346788999999999999999999999999999763

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.53  E-value=1e-14  Score=107.61  Aligned_cols=93  Identities=23%  Similarity=0.396  Sum_probs=69.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC-CCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN-KKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   79 (133)
                      ||||+ +....|+.++|+||  +||++++|++|..|| .+.+...               ....+... ....++....+
T Consensus       206 ~aPE~-~~~~~~~~~~DiwS--lG~il~el~~G~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  266 (364)
T cd05599         206 IAPEV-FLQTGYNKECDWWS--LGVIMYEMLVGYPPF-CSDNPQE---------------TYRKIINWKETLQFPDEVPL  266 (364)
T ss_pred             cCHHH-HcCCCCCCeeeeec--chhHHHHhhcCCCCC-CCCCHHH---------------HHHHHHcCCCccCCCCCCCC
Confidence            68999 77888999999999  999999999999999 5443222               22222211 11222222346


Q ss_pred             cHHHHHHHHHHhhhcccccCC---HHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRAS---ASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s---~~ell~h~~~~~~  113 (133)
                      ++.+.+|+.+||. +|.+|++   +.+++.||||+..
T Consensus       267 s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         267 SPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             CHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            8899999999996 8999997   9999999999754

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0671|consensus

Probab=99.53  E-value=1.3e-15  Score=111.06  Aligned_cols=108  Identities=16%  Similarity=0.142  Sum_probs=67.8

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCccc------chhhHHhhHHHHHHHhhhCCCCCcch
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFL------IPYLFILSCRQALYLIATNKKPEIKE   75 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (133)
                      |||+ +.+.+++.++|+||  +||+++|+.+|...| .... ..++++      +|.-..+..+....++......+.++
T Consensus       277 APEV-iLgLGwS~pCDvWS--iGCIL~ElytG~~LF-qtHe-n~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e  351 (415)
T KOG0671|consen  277 APEV-ILGLGWSQPCDVWS--IGCILVELYTGETLF-QTHE-NLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPE  351 (415)
T ss_pred             Cchh-eeccCcCCccCcee--eeeEEEEeeccceec-ccCC-cHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCcc
Confidence            8999 88999999999999  999999999999999 4433 332221      01100000000000000000000000


Q ss_pred             ---------------h--------hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          76 ---------------K--------EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        76 ---------------~--------~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                                     +        ...-..+.||+++||.+||.+|+|+.|+|.||||+...
T Consensus       352 ~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  352 VSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             ccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence                           0        01123567999999999999999999999999998643

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.53  E-value=4.5e-14  Score=100.71  Aligned_cols=96  Identities=26%  Similarity=0.376  Sum_probs=69.4

Q ss_pred             CCCccccCCC------CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc
Q psy9738           1 MAPEGGHHRK------QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK   74 (133)
Q Consensus         1 maPE~~~~~~------~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (133)
                      ++||. +.+.      .++.++|+|+  +|++++++++|..|| .......            .......+.....+.+ 
T Consensus       168 ~aPE~-~~~~~~~~~~~~~~~~Diws--lG~il~~l~~g~~pf-~~~~~~~------------~~~~~~~~~~~~~~~~-  230 (286)
T cd06622         168 MAPER-IKSGGPNQNPTYTVQSDVWS--LGLSILEMALGRYPY-PPETYAN------------IFAQLSAIVDGDPPTL-  230 (286)
T ss_pred             cCcch-hcCCCCCccCCCCcccchHh--HHHHHHHHHhCCCCC-CCcchhh------------HHHHHHHHhhcCCCCC-
Confidence            57888 5332      3577899999  999999999999999 4332211            0001222223333344 


Q ss_pred             hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          75 EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        75 ~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                       +..++.++.+|+.+||..+|+.||++.+++.||||....
T Consensus       231 -~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         231 -PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             -CcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence             345789999999999999999999999999999997654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG4279|consensus

Probab=99.53  E-value=2.1e-15  Score=117.47  Aligned_cols=93  Identities=29%  Similarity=0.512  Sum_probs=73.3

Q ss_pred             CCCccccCC--CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC-CCCCcchhh
Q psy9738           1 MAPEGGHHR--KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN-KKPEIKEKE   77 (133)
Q Consensus         1 maPE~~~~~--~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   77 (133)
                      ||||+ +..  .+|+..+||||  +||.+.||.+|++|| .....-+              +++..+.-- ..|++  |.
T Consensus       743 MAPEv-IDqG~RGYG~aADIWS--~GCT~vEMATGrPPF-~Elgspq--------------AAMFkVGmyKvHP~i--Pe  802 (1226)
T KOG4279|consen  743 MAPEV-IDQGPRGYGKAADIWS--FGCTMVEMATGRPPF-VELGSPQ--------------AAMFKVGMYKVHPPI--PE  802 (1226)
T ss_pred             hChHh-hccCCcCCCchhhhhh--ccceeEeeccCCCCe-eecCChh--------------HhhhhhcceecCCCC--cH
Confidence            89999 643  47999999999  999999999999999 4322211              023333221 23555  67


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      .++.+++.|+.+|+..||..||++.++|..||++..
T Consensus       803 elsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  803 ELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             HHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence            899999999999999999999999999999999754

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.53  E-value=7.6e-15  Score=112.89  Aligned_cols=91  Identities=23%  Similarity=0.344  Sum_probs=71.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++|++++|..|| .+.+...               ....+.......+  +...+
T Consensus       212 ~aPE~-~~~~~~s~k~DVwS--lGvilyeLltG~~Pf-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  270 (496)
T PTZ00283        212 VAPEI-WRRKPYSKKADMFS--LGVLLYELLTLKRPF-DGENMEE---------------VMHKTLAGRYDPL--PPSIS  270 (496)
T ss_pred             eCHHH-hCCCCCCcHHHHHH--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHhcCCCCCC--CCCCC
Confidence            68999 77888999999999  999999999999999 5433211               2223332222233  44678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      +.+.+++.+||..+|.+||++.+++.|||++.
T Consensus       271 ~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        271 PEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            89999999999999999999999999999753

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.53  E-value=1.8e-14  Score=102.24  Aligned_cols=102  Identities=22%  Similarity=0.282  Sum_probs=65.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhH-----HHHHHHhhhC--CCCCc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC-----RQALYLIATN--KKPEI   73 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~   73 (133)
                      +|||++..++.++.++|+||  +|+++++|++|.+|| .+.+.... .    ..+...     ..........  ....+
T Consensus       165 ~aPE~~~~~~~~~~~~Di~s--lGv~l~el~~~~~p~-~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (282)
T cd07831         165 RAPECLLTDGYYGPKMDIWA--VGCVFFEILSLFPLF-PGTNELDQ-I----AKIHDVLGTPDAEVLKKFRKSRHMNYNF  236 (282)
T ss_pred             CChhHhhcCCCCCcchhHHH--HHHHHHHHHcCCcCC-CCCCHHHH-H----HHHHHHcCCCCHHHHHhhcccccccccC
Confidence            58997344556788999999  999999999999999 55432210 0    000000     0000000000  00001


Q ss_pred             ch---------hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          74 KE---------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        74 ~~---------~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      +.         ....+..+.+++.+||..+|++||+++++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            00         12357889999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0658|consensus

Probab=99.53  E-value=1e-14  Score=105.72  Aligned_cols=95  Identities=25%  Similarity=0.330  Sum_probs=73.6

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC-------------
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN-------------   68 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------   68 (133)
                      |||.++....|+.+.||||  .||+++||+.|++.| .|++...               ++..+...             
T Consensus       193 aPELifga~~Yt~~IDiWS--aGCV~aELl~g~plF-pG~s~~d---------------QL~eIik~lG~Pt~e~I~~mn  254 (364)
T KOG0658|consen  193 APELIFGATEYTTSIDIWS--AGCVMAELLKGQPLF-PGDSSVD---------------QLVEIIKVLGTPTREDIKSMN  254 (364)
T ss_pred             CHHHHcCccccCceeEEhh--hhHHHHHHhcCCccc-CCCCHHH---------------HHHHHHHHhCCCCHHHHhhcC
Confidence            7999778899999999999  999999999999999 7766544               22222210             


Q ss_pred             ------CCCCcc-------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          69 ------KKPEIK-------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        69 ------~~~~~~-------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                            ..+.+.       .....+++..+|+.++|+++|..|.++.++|.||||..-+
T Consensus       255 ~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr  313 (364)
T KOG0658|consen  255 PNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR  313 (364)
T ss_pred             cccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence                  001111       1234678999999999999999999999999999997543

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.53  E-value=2e-14  Score=102.36  Aligned_cols=107  Identities=21%  Similarity=0.220  Sum_probs=63.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccc------hhh----HHhhHHHHHHHhhhCCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLI------PYL----FILSCRQALYLIATNKK   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~   70 (133)
                      +|||++.....++.++|+|+  +|++++++++|..|| .+.+.......+      +..    .................
T Consensus       167 ~aPE~~~~~~~~~~~~Dv~s--lG~il~~l~tg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (284)
T cd07860         167 RAPEILLGCKYYSTAVDIWS--LGCIFAEMVTRRALF-PGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWAR  243 (284)
T ss_pred             cCCeEEecCCCCCcHHHHHH--HHHHHHHHHHCCCCC-CCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccc
Confidence            58998333344678899999  999999999999999 543321100000      000    00000000000000000


Q ss_pred             CCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          71 PEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        71 ~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+. ....+++.+++++.+||..||.+||++.+++.||||
T Consensus       244 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         244 QDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             cCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            0000 012356788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.53  E-value=1.7e-14  Score=107.32  Aligned_cols=94  Identities=26%  Similarity=0.384  Sum_probs=68.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-CCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++|+||  +||++++|++|..|| ...+...               ....+.. .....++....+
T Consensus       215 ~aPE~-~~~~~~~~~~DiwS--lG~il~elltG~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  275 (381)
T cd05626         215 IAPEV-LLRKGYTQLCDWWS--VGVILFEMLVGQPPF-LAPTPTE---------------TQLKVINWENTLHIPPQVKL  275 (381)
T ss_pred             cCHHH-HcCCCCCCccceee--hhhHHHHHHhCCCCC-cCCCHHH---------------HHHHHHccccccCCCCCCCC
Confidence            68999 77788999999999  999999999999999 5443222               2222221 122233223357


Q ss_pred             cHHHHHHHHHHhh--hcccccCCHHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLE--EEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~--~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ++++.+|+.+++.  .++..|+++.+++.||||...
T Consensus       276 s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         276 SPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             CHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence            8999999998654  455569999999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.53  E-value=3.5e-14  Score=106.29  Aligned_cols=109  Identities=20%  Similarity=0.222  Sum_probs=68.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccc------------------hhhHHhhHHHHH
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLI------------------PYLFILSCRQAL   62 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~------------------~~~~~~~~~~~~   62 (133)
                      ||||+ +.+..|+.++|+||  +|++++++++|..|| ............                  +...........
T Consensus       250 ~aPE~-~~~~~~~~~~DiwS--lGvil~elltg~~p~-~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~  325 (391)
T PHA03212        250 NAPEL-LARDPYGPAVDIWS--AGIVLFEMATCHDSL-FEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIY  325 (391)
T ss_pred             CChhh-hcCCCCCcHHHHHH--HHHHHHHHHHCCCCc-CCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHH
Confidence            58999 77788999999999  999999999999887 443221110000                  000000000000


Q ss_pred             HHhhhC---CC---CCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          63 YLIATN---KK---PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        63 ~~~~~~---~~---~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ......   .+   +........+.++.+++.+||..||.+|||+.++|+||||+..
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        326 IGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI  382 (391)
T ss_pred             HHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence            000000   00   0010112346688999999999999999999999999999763

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.53  E-value=1.5e-14  Score=105.64  Aligned_cols=93  Identities=23%  Similarity=0.334  Sum_probs=69.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC----CCCCcc-h
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN----KKPEIK-E   75 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~   75 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+...    ..+... .
T Consensus       165 ~aPE~-~~~~~~~~~~Dvws--lG~il~ell~g~~pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  225 (333)
T cd05600         165 MAPEV-LRGKGYDFTVDYWS--LGCMLYEFLCGFPPF-SGSTPNE---------------TWENLKYWKETLQRPVYDDP  225 (333)
T ss_pred             cChhH-hcCCCCCCccceec--chHHHhhhhhCCCCC-CCCCHHH---------------HHHHHHhccccccCCCCCcc
Confidence            68999 77778999999999  999999999999999 5433221               11111110    111110 0


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ...++.++.+|+.+||..+|.+|+++.+++.||||..
T Consensus       226 ~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~  262 (333)
T cd05600         226 RFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKE  262 (333)
T ss_pred             ccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCC
Confidence            1245889999999999999999999999999999985

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.53  E-value=1.8e-14  Score=102.62  Aligned_cols=91  Identities=33%  Similarity=0.648  Sum_probs=66.5

Q ss_pred             CCCccccC-----CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch
Q psy9738           1 MAPEGGHH-----RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE   75 (133)
Q Consensus         1 maPE~~~~-----~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (133)
                      +|||+ +.     ...++.++|+||  +|++++++++|..|| ...+...               ..........+....
T Consensus       191 ~aPE~-~~~~~~~~~~~~~~~Dv~s--lGvi~~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~  251 (286)
T cd06638         191 MAPEV-IACEQQLDSTYDARCDVWS--LGITAIELGDGDPPL-ADLHPMR---------------ALFKIPRNPPPTLHQ  251 (286)
T ss_pred             cChhh-hchhhhccccccchhhhhh--HHHHHHHHhcCCCCC-CCCchhH---------------HHhhccccCCCcccC
Confidence            57888 42     345788999999  999999999999999 5443322               222222222222222


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      +...+..+.+++.+||..+|++||++.++++|+||
T Consensus       252 ~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         252 PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             CCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            34457789999999999999999999999999996

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.53  E-value=1.9e-14  Score=102.38  Aligned_cols=107  Identities=21%  Similarity=0.234  Sum_probs=64.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchh------h----HHhhHHHHHHHhhhCCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPY------L----FILSCRQALYLIATNKK   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~   70 (133)
                      ||||++.....++.++|+||  +|++++++++|..|| ...+...+...+..      .    .................
T Consensus       166 ~aPE~~~~~~~~~~~~Di~s--lG~~l~~l~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (283)
T cd07835         166 RAPEILLGSRQYSTPVDIWS--IGCIFAEMVNRRPLF-PGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWAR  242 (283)
T ss_pred             CCCceeecCcccCcHHHHHH--HHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccc
Confidence            58998334445788999999  999999999999999 54332110000000      0    00000000000000000


Q ss_pred             CCc-chhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          71 PEI-KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        71 ~~~-~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ... .....++..+.+++.+||+.+|.+||++.+++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         243 QDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             cchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            000 0013456788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.52  E-value=3.5e-14  Score=99.79  Aligned_cols=92  Identities=33%  Similarity=0.517  Sum_probs=67.8

Q ss_pred             CCCccccCCCC---CCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhh
Q psy9738           1 MAPEGGHHRKQ---YGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKE   77 (133)
Q Consensus         1 maPE~~~~~~~---~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (133)
                      ++||. +....   ++.++|+|+  +|++++++++|..|| .......              .....+.....+.++...
T Consensus       170 ~~PE~-~~~~~~~~~~~~~Dv~s--~G~il~~l~~g~~pf-~~~~~~~--------------~~~~~~~~~~~~~~~~~~  231 (264)
T cd06626         170 MAPEV-ITGGKGKGHGRAADIWS--LGCVVLEMATGKRPW-SELDNEF--------------QIMFHVGAGHKPPIPDSL  231 (264)
T ss_pred             cChhh-ccCCCCCCCCcccchHH--HHHHHHHHHhCCCCc-cCCcchH--------------HHHHHHhcCCCCCCCccc
Confidence            57888 55544   788999999  999999999999999 4332111              022223333334443223


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+..+.+|+.+||+.+|.+||++.+++.|||+
T Consensus       232 ~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         232 QLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             ccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            457888999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.52  E-value=1.8e-14  Score=105.42  Aligned_cols=109  Identities=21%  Similarity=0.358  Sum_probs=69.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcc--------cc------hhh-----H-------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHF--------LI------PYL-----F-------   54 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~--------~~------~~~-----~-------   54 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| ..........        ..      +..     .       
T Consensus       169 ~aPE~-~~~~~~~~~~Dvws--lG~il~~l~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (333)
T cd06650         169 MSPER-LQGTHYSVQSDIWS--MGLSLVEMAIGRYPI-PPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPD  244 (333)
T ss_pred             cCHHH-hcCCCCCcHHHHHH--HHHHHHHHHHCCCCC-CCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhccc
Confidence            68999 77778899999999  999999999999999 4322110000        00      000     0       


Q ss_pred             ---HhhHHHHHHHhhhCCCCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          55 ---ILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        55 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                         ..........+.....+.+. ....+.++++|+.+||+.||++||++.+++.|+||+...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  306 (333)
T cd06650         245 SRPPMAIFELLDYIVNEPPPKLP-SGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE  306 (333)
T ss_pred             ccccccHHHHHHHHhcCCCccCC-CCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence               00000001111111112221 123567899999999999999999999999999998654

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.52  E-value=1.6e-14  Score=107.44  Aligned_cols=93  Identities=26%  Similarity=0.419  Sum_probs=69.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-CCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++|+||  +||++++|++|..|| .+.+...               ....+.. .....++....+
T Consensus       215 ~aPE~-~~~~~~~~~~DiwS--lGvil~elltG~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~p~~~~~  275 (382)
T cd05625         215 IAPEV-LLRTGYTQLCDWWS--VGVILYEMLVGQPPF-LAQTPLE---------------TQMKVINWQTSLHIPPQAKL  275 (382)
T ss_pred             CCHHH-hcCCCCCCeeeEEe--chHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHccCCCcCCCCcccC
Confidence            68999 77888999999999  999999999999999 5543322               2222221 112223223457


Q ss_pred             cHHHHHHHHHHhhhcccccCC---HHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRAS---ASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s---~~ell~h~~~~~~  113 (133)
                      ++++.+++.+++ .+|.+|++   +.++++||||+..
T Consensus       276 s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~  311 (382)
T cd05625         276 SPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI  311 (382)
T ss_pred             CHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence            889999998876 58999987   9999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.52  E-value=2.7e-14  Score=106.71  Aligned_cols=106  Identities=16%  Similarity=0.158  Sum_probs=68.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhh----------------HHHHHHH
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILS----------------CRQALYL   64 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~   64 (133)
                      ||||+ +....|+.++|+||  +|+++++|++|..|| .+........  ....+..                .......
T Consensus       254 ~aPE~-~~~~~~~~~~Dvws--lGvil~el~~g~~pf-~~~~~~~~~~--~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~  327 (392)
T PHA03207        254 NSPEL-LALDPYCAKTDIWS--AGLVLFEMSVKNVTL-FGKQVKSSSS--QLRSIIRCMQVHPLEFPQNGSTNLCKHFKQ  327 (392)
T ss_pred             cCHhH-hcCCCCCchhhHHH--HHHHHHHHHHCCCCC-CCCCCCCcHH--HHHHHHHHhccCccccCCccchhHHHHHHh
Confidence            58999 77888999999999  999999999999999 5543221000  0000000                0000000


Q ss_pred             hhhCCCCCcc-----hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          65 IATNKKPEIK-----EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        65 ~~~~~~~~~~-----~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ......+...     .....+.++.+|+.+||..||.+||++.++|.||||+.
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~  380 (392)
T PHA03207        328 YAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTK  380 (392)
T ss_pred             hcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence            0000001110     01234667889999999999999999999999999975

>KOG4645|consensus

Probab=99.52  E-value=2.7e-15  Score=122.32  Aligned_cols=100  Identities=34%  Similarity=0.453  Sum_probs=83.0

Q ss_pred             CCCccccC--CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHH--RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~--~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      ||||++..  +++.+.+.||||  +||+..||.+|+.||..-++...               .++++.-+..|++  |..
T Consensus      1405 MAPEvit~t~~kG~~~A~DiWs--lGCVVlEM~tGkrPW~~~dne~a---------------IMy~V~~gh~Pq~--P~~ 1465 (1509)
T KOG4645|consen 1405 MAPEVITGTKGKGHGGAADIWS--LGCVVLEMATGKRPWAELDNEWA---------------IMYHVAAGHKPQI--PER 1465 (1509)
T ss_pred             cCchhhcccccCCCCcchhhhc--ccceEEEeecCCCchhhccchhH---------------HHhHHhccCCCCC--chh
Confidence            89999332  356778999999  99999999999999922233333               7888888888999  556


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCCh
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL  119 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~  119 (133)
                      ++++.++|+..||+.||.+|-++.++++|.|.+...+..++
T Consensus      1466 ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d~~s~ 1506 (1509)
T KOG4645|consen 1466 LSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTDEDSS 1506 (1509)
T ss_pred             hhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccccchh
Confidence            99999999999999999999999999999999876655443

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.52  E-value=4.1e-14  Score=103.32  Aligned_cols=98  Identities=20%  Similarity=0.273  Sum_probs=71.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| ...........         ...........+..+  +...+
T Consensus       163 ~aPE~-~~~~~~~~~~Diws--lGvil~ell~g~~pf-~~~~~~~~~~~---------~~~~~~~~~~~~~~~--p~~~~  227 (327)
T cd05617         163 IAPEI-LRGEEYGFSVDWWA--LGVLMFEMMAGRSPF-DIITDNPDMNT---------EDYLFQVILEKPIRI--PRFLS  227 (327)
T ss_pred             CCHHH-HCCCCCCchheeeh--hHHHHHHHHhCCCCC-CccCCCccccc---------HHHHHHHHHhCCCCC--CCCCC
Confidence            68999 77888999999999  999999999999999 43221110000         002222333333344  45678


Q ss_pred             HHHHHHHHHHhhhcccccCC------HHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRAS------ASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s------~~ell~h~~~~~~  113 (133)
                      ..+.+++.+||..||.+|++      +++++.||||+..
T Consensus       228 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         228 VKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             HHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence            89999999999999999997      5799999999753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.52  E-value=1.7e-14  Score=107.06  Aligned_cols=93  Identities=19%  Similarity=0.385  Sum_probs=68.6

Q ss_pred             CCCccccCC----CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcch
Q psy9738           1 MAPEGGHHR----KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKE   75 (133)
Q Consensus         1 maPE~~~~~----~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   75 (133)
                      ||||+ +..    ..++.++|+||  +||++++|++|..|| .+.+...               ....+.... ...++.
T Consensus       210 ~aPE~-~~~~~~~~~~~~~~DiwS--lGvilyelltG~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~~  270 (370)
T cd05596         210 ISPEV-LKSQGGDGYYGRECDWWS--VGVFLYEMLVGDTPF-YADSLVG---------------TYSKIMDHKNSLTFPD  270 (370)
T ss_pred             ECHHH-hccCCCCCCCCCceeeee--hhHHHHHHHhCCCCc-CCCCHHH---------------HHHHHHcCCCcCCCCC
Confidence            68998 533    24788999999  999999999999999 5443322               222222221 123322


Q ss_pred             hhhhcHHHHHHHHHHhhhcccc--cCCHHHHhcCccccc
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVET--RASASLLLKHPFLKI  112 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~--R~s~~ell~h~~~~~  112 (133)
                      ....+..+.+|+.+||..+|.+  |+++.+++.||||+.
T Consensus       271 ~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~  309 (370)
T cd05596         271 DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN  309 (370)
T ss_pred             cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence            3357899999999999988887  999999999999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.52  E-value=2.4e-14  Score=101.95  Aligned_cols=107  Identities=18%  Similarity=0.257  Sum_probs=63.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHH----hhHHHHHHHhhhCC-CCCcc-
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFI----LSCRQALYLIATNK-KPEIK-   74 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~-   74 (133)
                      +|||++.....++.++|+||  +|+++++|++|..|+ .........+..-...+    ...+.......... .+... 
T Consensus       166 ~aPE~~~~~~~~~~~~Diws--lG~il~~l~tg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd07839         166 RPPDVLFGAKLYSTSIDMWS--AGCIFAELANAGRPL-FPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPA  242 (284)
T ss_pred             cChHHHhCCcccCcHHHHHH--HHHHHHHHHhcCCCC-cCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCC
Confidence            58998334455788999999  999999999998886 33332210000000000    00000000000000 00000 


Q ss_pred             ------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          75 ------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        75 ------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                            .....+..+++|+.+||..||.+|||+++++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         243 TTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             cchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence                  012357889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0667|consensus

Probab=99.52  E-value=1.8e-14  Score=110.55  Aligned_cols=107  Identities=22%  Similarity=0.342  Sum_probs=69.7

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcc------cchhhHHhhHHHHHHH-----------
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHF------LIPYLFILSCRQALYL-----------   64 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-----------   64 (133)
                      |||+ +.+.+|+.+.|+||  +||+++||++|.+.| .|++...+..      ..|...+.+-......           
T Consensus       356 APEV-ILGlpY~~~IDmWS--LGCIlAEL~tG~PLf-pG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~  431 (586)
T KOG0667|consen  356 APEV-ILGLPYDTAIDMWS--LGCILAELFTGEPLF-PGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRL  431 (586)
T ss_pred             cchh-hccCCCCCccceee--hhhhHHhHhcCcccc-CCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceee
Confidence            8999 99999999999999  999999999999989 7776533111      1111111110000000           


Q ss_pred             ----------------------hhhCCCC-Ccch-----hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          65 ----------------------IATNKKP-EIKE-----KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        65 ----------------------~~~~~~~-~~~~-----~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                                            ......| ....     +......+.+|+.+||..||..|+|..++|+|||+..
T Consensus       432 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~  507 (586)
T KOG0667|consen  432 CVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTG  507 (586)
T ss_pred             eeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccc
Confidence                                  0000011 0000     0012346789999999999999999999999999984

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.52  E-value=5e-14  Score=100.50  Aligned_cols=96  Identities=20%  Similarity=0.392  Sum_probs=70.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||++..+..++.++|+||  +|++++++++|..|| .+..... ..            ..........+.+  +...+
T Consensus       162 ~aPE~~~~~~~~~~~~Di~s--~G~~l~~l~~g~~p~-~~~~~~~-~~------------~~~~~~~~~~~~~--~~~~s  223 (278)
T cd05606         162 MAPEVLQKGVAYDSSADWFS--LGCMLFKLLRGHSPF-RQHKTKD-KH------------EIDRMTLTMAVEL--PDSFS  223 (278)
T ss_pred             cCcHHhcCCCCCCcccchHh--HHHHHHHHHhCCCCC-CCCCccc-hH------------HHHHHhhccCCCC--CCcCC
Confidence            58999333456889999999  999999999999999 5432221 00            1111122222333  34568


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~~~  114 (133)
                      ..+.+++.+||..+|..|+     ++.++++||||+...
T Consensus       224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         224 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             HHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence            9999999999999999999     999999999998643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.52  E-value=3e-14  Score=104.52  Aligned_cols=109  Identities=18%  Similarity=0.214  Sum_probs=67.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccc----h--hhHHh-hHHHHHHHhhh--CCCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLI----P--YLFIL-SCRQALYLIAT--NKKP   71 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~----~--~~~~~-~~~~~~~~~~~--~~~~   71 (133)
                      +|||++.....++.++|+||  +|++++++++|+.|| .+.+.......+    +  ..... ...........  ...+
T Consensus       185 ~aPE~~~~~~~~~~~~DiwS--lGvil~el~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (342)
T cd07854         185 RSPRLLLSPNNYTKAIDMWA--AGCIFAEMLTGKPLF-AGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEP  261 (342)
T ss_pred             cCHHHHhCccccCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhccccc
Confidence            47898344466788999999  999999999999999 554322100000    0  00000 00000000000  0011


Q ss_pred             Ccch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          72 EIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        72 ~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ..+.   ....+.++.+|+.+||..||.+||++++++.||||+.
T Consensus       262 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         262 RRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             CCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence            1100   1235678899999999999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.52  E-value=2.5e-14  Score=102.35  Aligned_cols=103  Identities=21%  Similarity=0.272  Sum_probs=65.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHH----HH----------HHhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ----AL----------YLIA   66 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~----------~~~~   66 (133)
                      +|||++.....++.++|+|+  +|+++++|++|..|| .+........     .+.....    ..          ....
T Consensus       178 ~aPE~~~~~~~~~~~~Di~s--lG~~l~~l~~g~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (295)
T cd07837         178 RAPEVLLGSTHYSTPVDIWS--VGCIFAEMSRKQPLF-PGDSELQQLL-----HIFKLLGTPTEQVWPGVSKLRDWHEFP  249 (295)
T ss_pred             CChHHhhCCCCCCchHHHHH--HHHHHHHHHcCCCCC-CCCCHHHHHH-----HHHHHhCCCChhhCcchhhccchhhcC
Confidence            57898334456788999999  999999999999999 5543222000     0000000    00          0000


Q ss_pred             hCCCCCcch-hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          67 TNKKPEIKE-KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        67 ~~~~~~~~~-~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      ...+..+.. ....+..+.+|+.+||..+|.+||++.+++.||||+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         250 QWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             cccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence            000000000 023578899999999999999999999999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.51  E-value=2.8e-14  Score=100.40  Aligned_cols=89  Identities=21%  Similarity=0.373  Sum_probs=67.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. .....++.++|+|+  +|++++++++|..|| .......               ....+.....+..  +...+
T Consensus       172 ~~pe~-~~~~~~~~~~Dv~s--lG~~~~~l~~~~~~~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  230 (260)
T cd08222         172 MSPEA-LKHQGYDSKSDIWS--LGCILYEMCCLAHAF-EGQNFLS---------------VVLRIVEGPTPSL--PETYS  230 (260)
T ss_pred             cCHHH-HccCCCCchhhHHH--HHHHHHHHHhCCCCC-CCccHHH---------------HHHHHHcCCCCCC--cchhc
Confidence            47887 66677888999999  999999999999999 4332211               2222222223333  34567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+.+++.+|+..+|+.||++.++++||||
T Consensus       231 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         231 RQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence            899999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.51  E-value=4.4e-14  Score=99.61  Aligned_cols=93  Identities=33%  Similarity=0.539  Sum_probs=68.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-CCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (133)
                      ++||. +....++.++|+|+  +|++++++++|..|| ....... ...           ....... ...+.+  +...
T Consensus       175 ~~PE~-~~~~~~~~~~Dv~s--lG~~l~~l~~g~~p~-~~~~~~~-~~~-----------~~~~~~~~~~~~~~--~~~~  236 (268)
T cd06630         175 MAPEV-LRGEQYGRSCDVWS--VGCVIIEMATAKPPW-NAEKHSN-HLA-----------LIFKIASATTAPSI--PEHL  236 (268)
T ss_pred             eCHhH-hccCCCCcccchHH--HHHHHHHHHhCCCCC-CCCCCcc-hHH-----------HHHHHhccCCCCCC--chhh
Confidence            57888 66777889999999  999999999999999 4332221 000           1111111 122333  4467


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      ++.+.+++.+||..+|+.||++.+++.||||+
T Consensus       237 ~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         237 SPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            88999999999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.51  E-value=2.1e-14  Score=102.42  Aligned_cols=95  Identities=20%  Similarity=0.324  Sum_probs=67.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +....++.++|+||  +|++++++++|..|| ........            ................ ...++
T Consensus       161 ~aPE~-~~~~~~~~~~Dvws--lGv~l~el~~g~~p~-~~~~~~~~------------~~~~~~~~~~~~~~~~-~~~~~  223 (277)
T cd05607         161 MAPEI-LKEEPYSYPVDWFA--MGCSIYEMVAGRTPF-KDHKEKVA------------KEELKRRTLEDEVKFE-HQNFT  223 (277)
T ss_pred             cCHHH-HccCCCCCchhHHH--HHHHHHHHHhCCCCC-CCCcchhh------------HHHHHHHhhccccccc-cccCC
Confidence            58999 77777999999999  999999999999999 43222110            0011111111111111 13468


Q ss_pred             HHHHHHHHHHhhhcccccCCH----HHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA----SLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~----~ell~h~~~~~  112 (133)
                      ..+++++.+||+.||.+|+++    ++++.|+||+.
T Consensus       224 ~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~  259 (277)
T cd05607         224 EESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKT  259 (277)
T ss_pred             HHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcC
Confidence            889999999999999999999    66789999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.51  E-value=3.3e-14  Score=102.72  Aligned_cols=106  Identities=23%  Similarity=0.424  Sum_probs=66.1

Q ss_pred             CCCccccCC--CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHH------HHHH----hh--
Q psy9738           1 MAPEGGHHR--KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ------ALYL----IA--   66 (133)
Q Consensus         1 maPE~~~~~--~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~~~----~~--   66 (133)
                      +|||+ +..  ..|+.++|+||  +|++++++++|..|| ........  ....  +.....      ....    ..  
T Consensus       175 ~aPE~-~~~~~~~~~~~~Diws--~G~il~el~~g~~pf-~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  246 (314)
T cd08216         175 LSPEV-LQQNLQGYNEKSDIYS--VGITACELANGHVPF-KDMPATQM--LLEK--VRGTVPCLLDKSTYPLYEDSMSQS  246 (314)
T ss_pred             cCHHH-hcCCCCCCCcchhHHH--HHHHHHHHHhCCCCC-CCCCHHHH--HHHH--HhccCccccccCchhhhcCCcCcc
Confidence            57898 533  45888999999  999999999999999 43321110  0000  000000      0000    00  


Q ss_pred             --------hCCCCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          67 --------TNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        67 --------~~~~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                              ............++..+.+|+.+||..+|++||++.++++||||+...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~  302 (314)
T cd08216         247 RSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK  302 (314)
T ss_pred             cccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence                    000000111233457788999999999999999999999999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.51  E-value=4.9e-14  Score=101.64  Aligned_cols=94  Identities=20%  Similarity=0.312  Sum_probs=68.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||. +....++.++|+||  +|++++++++|..|| .+.....               ....+..............+
T Consensus       183 ~aPE~-~~~~~~~~~~Di~s--lG~vl~el~~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  243 (305)
T cd05609         183 IAPEV-ILRQGYGKPVDWWA--MGIILYEFLVGCVPF-FGDTPEE---------------LFGQVISDDIEWPEGDEALP  243 (305)
T ss_pred             cCchh-ccCCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhcccCCCCccccCC
Confidence            57898 66677889999999  999999999999999 5443221               22222222111111112467


Q ss_pred             HHHHHHHHHHhhhcccccCC---HHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRAS---ASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s---~~ell~h~~~~~~  113 (133)
                      ..+.+++.+||..+|.+||+   +.++++||||...
T Consensus       244 ~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~  279 (305)
T cd05609         244 ADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL  279 (305)
T ss_pred             HHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence            88999999999999999997   7889999999653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.51  E-value=4.6e-14  Score=100.35  Aligned_cols=94  Identities=29%  Similarity=0.556  Sum_probs=69.0

Q ss_pred             CCCccccCC----CCCCCccccchhHHHHHHHHHHhCCCCCCCCCC-CCCCcccchhhHHhhHHHHHHHhhhCCCCCcch
Q psy9738           1 MAPEGGHHR----KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNEN-PLRPHFLIPYLFILSCRQALYLIATNKKPEIKE   75 (133)
Q Consensus         1 maPE~~~~~----~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (133)
                      +|||. +.+    ..++.++|+|+  +|+++++|++|..|| .... ...               ..........+.++ 
T Consensus       170 ~aPE~-~~~~~~~~~~~~~~Di~s--lG~~l~~l~~g~~p~-~~~~~~~~---------------~~~~~~~~~~~~~~-  229 (283)
T cd06617         170 MAPER-INPELNQKGYDVKSDVWS--LGITMIELATGRFPY-DSWKTPFQ---------------QLKQVVEEPSPQLP-  229 (283)
T ss_pred             cChhh-cCCcccccccCccccchh--hHHHHHHHHhCCCCC-CccccCHH---------------HHHHHHhcCCCCCC-
Confidence            57887 533    45788999999  999999999999999 3221 111               22222222223332 


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ...++..+.+|+.+||..+|.+||++.+++.||||....
T Consensus       230 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  268 (283)
T cd06617         230 AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL  268 (283)
T ss_pred             ccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence            134678899999999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.50  E-value=7.7e-14  Score=100.82  Aligned_cols=107  Identities=16%  Similarity=0.208  Sum_probs=62.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCC---Ccccchhh-HHhh--------HHHHHHHh---
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLR---PHFLIPYL-FILS--------CRQALYLI---   65 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~---~~~~~~~~-~~~~--------~~~~~~~~---   65 (133)
                      ||||++.....++.++|+||  +|+++++|++|.+|| .......   ..+..... .+..        .+......   
T Consensus       182 ~aPE~~~~~~~~~~~~DiwS--lG~il~el~tg~~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (317)
T cd07867         182 RAPELLLGARHYTKAIDIWA--IGCIFAELLTSEPIF-HCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEY  258 (317)
T ss_pred             cCcHHhcCCCccCcHHHHHh--HHHHHHHHHhCCCCc-ccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccc
Confidence            68999333456889999999  999999999999999 4322110   00000000 0000        00000000   


Q ss_pred             ---h---hCCC---CCcc-----hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          66 ---A---TNKK---PEIK-----EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        66 ---~---~~~~---~~~~-----~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                         .   ....   ..+.     .....+..+.+++.+||..||.+|||+.|+|+||||
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         259 PTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence               0   0000   0000     001234567899999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.50  E-value=3.7e-14  Score=99.88  Aligned_cols=94  Identities=22%  Similarity=0.341  Sum_probs=69.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-CCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (133)
                      |+||. +....++.++|+|+  +|++++++++|..|| .......  .           .....+.. ......  +...
T Consensus       159 ~~PE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~--~-----------~~~~~~~~~~~~~~~--~~~~  219 (262)
T cd05572         159 VAPEI-ILNKGYDFSVDYWS--LGILLYELLTGRPPF-GEDDEDP--M-----------EIYNDILKGNGKLEF--PNYI  219 (262)
T ss_pred             cChhH-hcCCCCCChhhhhh--hHHHHHHHHhCCCCc-CCCCCCH--H-----------HHHHHHhccCCCCCC--Cccc
Confidence            57998 77777889999999  999999999999999 4433111  0           01222221 222223  3345


Q ss_pred             cHHHHHHHHHHhhhcccccCC-----HHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~~  113 (133)
                      +..+.+++.+||..+|.+|++     +.++++||||+.-
T Consensus       220 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         220 DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             CHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence            789999999999999999999     9999999999853

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.50  E-value=3.8e-14  Score=100.77  Aligned_cols=106  Identities=25%  Similarity=0.388  Sum_probs=64.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhh---------hCCCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIA---------TNKKP   71 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~   71 (133)
                      ++||++.....++.++|+||  +|++++++++|..|| .+.......+.+.. .............         ....+
T Consensus       167 ~aPE~~~~~~~~~~~~Di~s--lG~i~~~l~~g~~p~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (286)
T cd07847         167 RAPELLVGDTQYGPPVDVWA--IGCVFAELLTGQPLW-PGKSDVDQLYLIRK-TLGDLIPRHQQIFSTNQFFKGLSIPEP  242 (286)
T ss_pred             CCHHHHhCCCCcCchhhhHH--HHHHHHHHHhCCCCC-CCCChHHHHHHHHH-HhCCCChHHhhhcccccccccccCCCc
Confidence            47888333456788999999  999999999999999 54432210000000 0000000000000         00000


Q ss_pred             C----cc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          72 E----IK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        72 ~----~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      .    +. .....+..+.+|+.+||..+|++||++.+++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         243 ETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             ccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            0    00 002356788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.50  E-value=9.2e-14  Score=102.66  Aligned_cols=103  Identities=21%  Similarity=0.347  Sum_probs=63.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh---CCCCCcc---
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT---NKKPEIK---   74 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---   74 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|+++..++ ..........   ..  ......+..+..   ..+..++   
T Consensus       223 ~aPE~-~~~~~~~~~~DiwS--lGvvl~ell~~~~~~-f~~~~~~~~~---~~--~~~~~~l~~~~~~~~~~~~~~~~~~  293 (357)
T PHA03209        223 NAPEV-LARDKYNSKADIWS--AGIVLFEMLAYPSTI-FEDPPSTPEE---YV--KSCHSHLLKIISTLKVHPEEFPRDP  293 (357)
T ss_pred             cCCee-cCCCCCCchhhHHH--HHHHHHHHHHcCCcc-ccCCCCcHHH---HH--HHHHHHHHHHHHHhccChhhcCCCC
Confidence            68999 77788999999999  999999999765444 2322111000   00  000000000000   0000000   


Q ss_pred             -------------------------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          75 -------------------------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        75 -------------------------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                                               .....+..+.+|+.+||..||.+|||+.++|+||||+.
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        294 GSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             ccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence                                     00134566778999999999999999999999999974

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.50  E-value=4.8e-14  Score=98.39  Aligned_cols=89  Identities=22%  Similarity=0.380  Sum_probs=68.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. .....++.++|+|+  +|++++++++|..|| .......               ............+  +...+
T Consensus       170 ~~pe~-~~~~~~~~~~Dv~s--lG~~~~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  228 (258)
T cd08215         170 LSPEL-CQNKPYNYKSDIWS--LGCVLYELCTLKHPF-EGENLLE---------------LALKILKGQYPPI--PSQYS  228 (258)
T ss_pred             cChhH-hccCCCCccccHHH--HHHHHHHHHcCCCCC-CCCcHHH---------------HHHHHhcCCCCCC--CCCCC
Confidence            47888 66777889999999  999999999999999 4333222               2222223333333  33567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+.+++.+||..+|++||++.++++||||
T Consensus       229 ~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         229 SELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.50  E-value=2.1e-14  Score=109.98  Aligned_cols=90  Identities=21%  Similarity=0.311  Sum_probs=70.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +||++++|++|..|| .+.+...               ....+........  +...+
T Consensus       238 ~aPE~-~~~~~~~~~~Dv~s--lG~~l~el~tg~~Pf-~~~~~~~---------------~~~~~~~~~~~~~--~~~~s  296 (478)
T PTZ00267        238 LAPEL-WERKRYSKKADMWS--LGVILYELLTLHRPF-KGPSQRE---------------IMQQVLYGKYDPF--PCPVS  296 (478)
T ss_pred             cCHhH-hCCCCCCcHHhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhCCCCCC--CccCC
Confidence            68999 77788999999999  999999999999999 5433221               2333333332222  34567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      ..+.+++.+||..+|..||++.+++.|+|++
T Consensus       297 ~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~  327 (478)
T PTZ00267        297 SGMKALLDPLLSKNPALRPTTQQLLHTEFLK  327 (478)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHHhCHHHH
Confidence            8999999999999999999999999999985

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.50  E-value=2e-14  Score=106.69  Aligned_cols=92  Identities=22%  Similarity=0.390  Sum_probs=67.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-CCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++|+||  +||++++|++|..|| .+.+...               ....+.. .....++....+
T Consensus       215 ~aPE~-~~~~~~~~~~DiwS--lGvil~elltG~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~p~~~~~  275 (377)
T cd05629         215 IAPEI-FLQQGYGQECDWWS--LGAIMFECLIGWPPF-CSENSHE---------------TYRKIINWRETLYFPDDIHL  275 (377)
T ss_pred             cCHHH-HccCCCCCceeeEe--cchhhhhhhcCCCCC-CCCCHHH---------------HHHHHHccCCccCCCCCCCC
Confidence            68999 77888999999999  999999999999999 5443322               2222221 111223222346


Q ss_pred             cHHHHHHHHHHhhhccccc---CCHHHHhcCccccc
Q psy9738          80 SQIFQDFLDQCLEEEVETR---ASASLLLKHPFLKI  112 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R---~s~~ell~h~~~~~  112 (133)
                      +..+.+|+.+||. +|..|   +++.+++.||||+.
T Consensus       276 s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~  310 (377)
T cd05629         276 SVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG  310 (377)
T ss_pred             CHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence            8899999999997 67665   59999999999975

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.50  E-value=5e-14  Score=99.60  Aligned_cols=90  Identities=32%  Similarity=0.583  Sum_probs=65.1

Q ss_pred             CCCccccCC--CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHh-hhCCCCCcchhh
Q psy9738           1 MAPEGGHHR--KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLI-ATNKKPEIKEKE   77 (133)
Q Consensus         1 maPE~~~~~--~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   77 (133)
                      +|||. +..  ..++.++|+||  +|++++++++|..|| ........              ..... .....+.+  +.
T Consensus       176 ~aPE~-~~~~~~~~~~~~Dv~s--lGvvl~~l~~g~~p~-~~~~~~~~--------------~~~~~~~~~~~~~~--~~  235 (268)
T cd06624         176 MAPEV-IDKGPRGYGAPADIWS--LGCTIVEMATGKPPF-IELGEPQA--------------AMFKVGMFKIHPEI--PE  235 (268)
T ss_pred             cChhh-hccccccCCchhhhHH--HHHHHHHHHhCCCCC-ccccChhh--------------hHhhhhhhccCCCC--Cc
Confidence            47888 543  34788999999  999999999999999 43221110              11111 11122233  34


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+..+.+|+.+||..+|.+||++.+++.||||
T Consensus       236 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         236 SLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             ccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence            567889999999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>PHA02988 hypothetical protein; Provisional

Probab=99.50  E-value=3.9e-14  Score=101.52  Aligned_cols=85  Identities=13%  Similarity=0.194  Sum_probs=63.3

Q ss_pred             CCCccccCC--CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhh-hCCCCCcchhh
Q psy9738           1 MAPEGGHHR--KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIA-TNKKPEIKEKE   77 (133)
Q Consensus         1 maPE~~~~~--~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   77 (133)
                      ||||+ +.+  ..|+.++|+||  +|+++|++++|..|| .+.+...               ....+. ....+.+  +.
T Consensus       187 ~aPE~-~~~~~~~~~~k~Di~S--lGvil~el~~g~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~--~~  245 (283)
T PHA02988        187 FSYKM-LNDIFSEYTIKDDIYS--LGVVLWEIFTGKIPF-ENLTTKE---------------IYDLIINKNNSLKL--PL  245 (283)
T ss_pred             cCHHH-hhhccccccchhhhhH--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHhcCCCCCC--CC
Confidence            68999 644  67899999999  999999999999999 4433221               222222 1222333  33


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+..+.+|+.+||+.||..||++.+++.
T Consensus       246 ~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        246 DCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             cCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            56789999999999999999999999873

>KOG0585|consensus

Probab=99.50  E-value=2.7e-14  Score=106.93  Aligned_cols=94  Identities=20%  Similarity=0.381  Sum_probs=75.6

Q ss_pred             CCCccccCCC--CC-CCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhh
Q psy9738           1 MAPEGGHHRK--QY-GPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKE   77 (133)
Q Consensus         1 maPE~~~~~~--~~-~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (133)
                      ||||.|..+.  .| +.+.|||+  +|+.+|.++.|+.|| .++...                .++..+.+.+..++...
T Consensus       282 ~APE~c~~~~~~~~~g~a~DiWa--lGVTLYCllfG~~PF-~~~~~~----------------~l~~KIvn~pL~fP~~p  342 (576)
T KOG0585|consen  282 FAPELCSGGNSFSYSGFALDIWA--LGVTLYCLLFGQLPF-FDDFEL----------------ELFDKIVNDPLEFPENP  342 (576)
T ss_pred             cchHhhcCCCCccccchhhhhhh--hhhhHHHhhhccCCc-ccchHH----------------HHHHHHhcCcccCCCcc
Confidence            7999966543  23 46799999  999999999999999 554433                35555566666665555


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      .+.+.++++|.++|..||.+|.+..++..|||+...
T Consensus       343 e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  343 EINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             cccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence            678999999999999999999999999999998654

>KOG0659|consensus

Probab=99.50  E-value=4.8e-14  Score=99.06  Aligned_cols=93  Identities=27%  Similarity=0.327  Sum_probs=70.0

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh--------------
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT--------------   67 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------   67 (133)
                      |||.++...+|+..+|+||  +||++.|++.|.+.| .|.+..+               ++..+..              
T Consensus       169 APELLfGsr~Yg~~VDmWa--vGCI~AELllr~P~f-pG~sDid---------------QL~~If~~LGTP~~~~WP~~~  230 (318)
T KOG0659|consen  169 APELLFGSRQYGTGVDMWA--VGCIFAELLLRVPFF-PGDSDID---------------QLSKIFRALGTPTPDQWPEMT  230 (318)
T ss_pred             ChHHhccchhcCCcchhhh--HHHHHHHHHccCCCC-CCCchHH---------------HHHHHHHHcCCCCcccCcccc
Confidence            7999778899999999999  999999999998888 7766544               2222111              


Q ss_pred             ----------CCCCCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          68 ----------NKKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        68 ----------~~~~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                                .+.+... --...+.++.+|+.++|.+||.+|.+++++|+|+||+.
T Consensus       231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~  286 (318)
T KOG0659|consen  231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS  286 (318)
T ss_pred             ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence                      0001100 00123567789999999999999999999999999985

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.50  E-value=4.6e-14  Score=102.88  Aligned_cols=91  Identities=19%  Similarity=0.307  Sum_probs=70.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+. ......  +...+
T Consensus       168 ~aPE~-~~~~~~~~~~Diws--lGvil~elltG~~pf-~~~~~~~---------------~~~~i~-~~~~~~--p~~~~  225 (323)
T cd05615         168 IAPEI-IAYQPYGKSVDWWA--YGVLLYEMLAGQPPF-DGEDEDE---------------LFQSIM-EHNVSY--PKSLS  225 (323)
T ss_pred             cCHHH-HcCCCCCCccchhh--hHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHH-hCCCCC--CccCC
Confidence            68999 77788999999999  999999999999999 5443221               222222 222233  44578


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~~  113 (133)
                      ..+.+++.+||..+|.+|++     ..++++||||...
T Consensus       226 ~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         226 KEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             HHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence            89999999999999999997     4789999999753

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.50  E-value=3.9e-14  Score=103.25  Aligned_cols=108  Identities=24%  Similarity=0.382  Sum_probs=64.6

Q ss_pred             CCCccccCC--CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCc-------ccchhh-HHhhHHHHHH-----H-
Q psy9738           1 MAPEGGHHR--KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPH-------FLIPYL-FILSCRQALY-----L-   64 (133)
Q Consensus         1 maPE~~~~~--~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~-----~-   64 (133)
                      |+||+ +.+  ..++.++|+||  +|++++++++|..|| .+.......       ...+.. ..........     . 
T Consensus       175 ~aPE~-~~~~~~~~~~~~Diws--lG~~l~el~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (328)
T cd08226         175 LSPEL-LRQDLYGYNVKSDIYS--VGITACELATGRVPF-QDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGV  250 (328)
T ss_pred             cChhh-hcCCCCCCCchhhHHH--HHHHHHHHHhCCCCC-CCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhh
Confidence            68998 543  45788999999  999999999999999 432211100       000000 0000000000     0 


Q ss_pred             -------h-h-----hC--CCCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          65 -------I-A-----TN--KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        65 -------~-~-----~~--~~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                             . .     ..  ...........+..+.+|+.+||..||++|||+.++++|+||+.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~  313 (328)
T cd08226         251 DSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ  313 (328)
T ss_pred             hcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence                   0 0     00  00000011235678899999999999999999999999999964

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.50  E-value=8.2e-15  Score=106.83  Aligned_cols=92  Identities=23%  Similarity=0.343  Sum_probs=67.8

Q ss_pred             CCCccccC------CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCc
Q psy9738           1 MAPEGGHH------RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEI   73 (133)
Q Consensus         1 maPE~~~~------~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   73 (133)
                      ||||+ +.      ...++.++|+||  +|+++++|++|..|| .......               ....+.... ...+
T Consensus       170 ~aPE~-~~~~~~~~~~~~~~~~Diws--lG~il~el~~g~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~  230 (330)
T cd05601         170 IAPEV-LTTMNGDGKGTYGVECDWWS--LGVIAYEMIYGRSPF-HEGTSAK---------------TYNNIMNFQRFLKF  230 (330)
T ss_pred             cCHHH-hccccccccCCCCCcceeec--ccceeeeeccCCCCC-CCCCHHH---------------HHHHHHcCCCccCC
Confidence            58998 53      456788999999  999999999999999 5433222               222222211 1222


Q ss_pred             chhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          74 KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        74 ~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      +.....+..+.+|+.+||. +|.+|+++.+++.||||..
T Consensus       231 ~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~  268 (330)
T cd05601         231 PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK  268 (330)
T ss_pred             CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence            2233568899999999998 9999999999999999975

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.49  E-value=4.3e-14  Score=104.52  Aligned_cols=94  Identities=16%  Similarity=0.260  Sum_probs=66.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC-CCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN-KKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++|+||  +||++++|++|..|| .+.....               ....+... ....++....+
T Consensus       203 ~aPE~-~~~~~~~~~~DvwS--lGvil~ell~G~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~p~~~~~  263 (363)
T cd05628         203 IAPEV-FMQTGYNKLCDWWS--LGVIMYEMLIGYPPF-CSETPQE---------------TYKKVMNWKETLIFPPEVPI  263 (363)
T ss_pred             cCHHH-HcCCCCCCchhhhh--hHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHcCcCcccCCCcCCC
Confidence            68999 77888999999999  999999999999999 5443322               22222221 11223222346


Q ss_pred             cHHHHHHHHHHhh--hcccccCCHHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLE--EEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~--~~p~~R~s~~ell~h~~~~~~  113 (133)
                      +..+++++.+++.  .++..||+++++++||||++.
T Consensus       264 s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~~  299 (363)
T cd05628         264 SEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGV  299 (363)
T ss_pred             CHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCCC
Confidence            7889999988664  223356899999999999753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.49  E-value=3.8e-14  Score=99.54  Aligned_cols=95  Identities=26%  Similarity=0.490  Sum_probs=70.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh-h
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK-L   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   79 (133)
                      ++||. +....++.++|+|+  +|++++++++|..|| .......            ..+....+.....+..  +.. .
T Consensus       167 ~~pE~-~~~~~~~~~~Dv~s--lG~il~~l~tg~~p~-~~~~~~~------------~~~~~~~~~~~~~~~~--~~~~~  228 (264)
T cd06623         167 MSPER-IQGESYSYAADIWS--LGLTLLECALGKFPF-LPPGQPS------------FFELMQAICDGPPPSL--PAEEF  228 (264)
T ss_pred             cCHhh-hCCCCCCchhhHHH--HHHHHHHHHhCCCCC-ccccccC------------HHHHHHHHhcCCCCCC--CcccC
Confidence            57898 76778888999999  999999999999999 4433211            0112222222332333  333 7


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      +..+.+++.+||..+|+.||++.++++|||++..
T Consensus       229 ~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         229 SPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence            8899999999999999999999999999999754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.49  E-value=3.8e-14  Score=104.30  Aligned_cols=108  Identities=19%  Similarity=0.217  Sum_probs=66.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCc------ccchhhH-HhhHHHHHHHhhhCCC---
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPH------FLIPYLF-ILSCRQALYLIATNKK---   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~---   70 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++|..|| ...+.....      +..+... ...+...........+   
T Consensus       184 ~aPE~-~~~~~~~~~~Dvws--lG~~l~~l~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (353)
T cd07850         184 RAPEV-ILGMGYKENVDIWS--VGCIMGEMIRGTVLF-PGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYA  259 (353)
T ss_pred             cCHHH-HhCCCCCCchhhHh--HHHHHHHHHHCCCCC-CCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCC
Confidence            58999 77788999999999  999999999999999 544321100      0000000 0000000000000000   


Q ss_pred             -CCcch--------------hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          71 -PEIKE--------------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        71 -~~~~~--------------~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                       ..+..              +...+..+++|+.+||..||.+||++.++|.|||++.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~  316 (353)
T cd07850         260 GYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV  316 (353)
T ss_pred             CcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence             00000              1123567889999999999999999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.49  E-value=6.2e-14  Score=98.96  Aligned_cols=90  Identities=32%  Similarity=0.647  Sum_probs=64.7

Q ss_pred             CCCccccC---CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC--CCCCcch
Q psy9738           1 MAPEGGHH---RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN--KKPEIKE   75 (133)
Q Consensus         1 maPE~~~~---~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~   75 (133)
                      ||||+ +.   ...++.++|+||  +|+++++|++|..|| ....+..               ........  .++....
T Consensus       173 ~aPE~-~~~~~~~~~~~~~DvwS--lG~il~~l~~~~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~  233 (267)
T cd06645         173 MAPEV-AAVERKGGYNQLCDIWA--VGITAIELAELQPPM-FDLHPMR---------------ALFLMTKSNFQPPKLKD  233 (267)
T ss_pred             cChhh-hccccCCCCCchhhhHH--HHHHHHHHhcCCCCc-ccccchh---------------hHHhhhccCCCCCcccc
Confidence            58998 42   455788999999  999999999999998 5433322               11111111  1122211


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcc
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF  109 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~  109 (133)
                      ....+..+.+|+.+||..+|++||++++++.|||
T Consensus       234 ~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         234 KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             cCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence            2245678999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.49  E-value=5.7e-14  Score=102.20  Aligned_cols=105  Identities=19%  Similarity=0.227  Sum_probs=67.2

Q ss_pred             CCCccccCCC-CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHH-------------HHHHHhh
Q psy9738           1 MAPEGGHHRK-QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCR-------------QALYLIA   66 (133)
Q Consensus         1 maPE~~~~~~-~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~   66 (133)
                      +|||+ +.+. .++.++|+||  +|++++++++|..|| .+.+....     ...+....             .......
T Consensus       173 ~aPE~-~~~~~~~~~~sDi~s--lG~il~~l~~g~~pf-~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~  243 (330)
T cd07834         173 RAPEL-LLSSSRYTKAIDIWS--VGCIFAELLTRKPLF-PGRDYIDQ-----LNLIVEVLGTPSEEDLKFITSEKARNYL  243 (330)
T ss_pred             CCcee-eecccCCCcchhHHH--HHHHHHHHHcCCCCc-CCCCHHHH-----HHHHHHhcCCCChhHhhhccccchhhHH
Confidence            57998 5555 7888999999  999999999999999 54432110     00000000             0000000


Q ss_pred             h--CCCCCcch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          67 T--NKKPEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        67 ~--~~~~~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      .  ........   ....+..+.+|+.+||..+|.+||++.+++.||||+...
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~  296 (330)
T cd07834         244 KSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH  296 (330)
T ss_pred             hhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence            0  00000000   123578889999999999999999999999999997543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.49  E-value=4.5e-14  Score=101.41  Aligned_cols=96  Identities=25%  Similarity=0.440  Sum_probs=68.4

Q ss_pred             CCCccccCCC----CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchh
Q psy9738           1 MAPEGGHHRK----QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEK   76 (133)
Q Consensus         1 maPE~~~~~~----~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (133)
                      +|||. +...    .++.++|+||  +|++++++++|..|| .......              +....+.....+.+...
T Consensus       181 ~aPE~-~~~~~~~~~~~~~~Di~s--lG~il~el~~g~~p~-~~~~~~~--------------~~~~~~~~~~~~~~~~~  242 (296)
T cd06618         181 MAPER-IDPPDPNPKYDIRADVWS--LGISLVELATGQFPY-KNCKTEF--------------EVLTKILQEEPPSLPPN  242 (296)
T ss_pred             cCHhh-cCCCCCccccccchhHHH--HHHHHHHHHhCCCCC-CcchhHH--------------HHHHHHhcCCCCCCCCC
Confidence            57888 5433    3778899999  999999999999999 4321110              01222222222333222


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ...+..+.+|+.+||..+|..||++.+++.|+|+....
T Consensus       243 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  280 (296)
T cd06618         243 EGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYE  280 (296)
T ss_pred             CCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccc
Confidence            34678899999999999999999999999999998533

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.49  E-value=8.4e-14  Score=99.37  Aligned_cols=104  Identities=21%  Similarity=0.294  Sum_probs=70.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||+ +....++.++|+||  +|++++++++|..|| .......+.. .....+.+   ....+.....+.+. ....+
T Consensus       169 ~aPE~-~~~~~~~~~~Di~s--lG~~l~~l~tg~~p~-~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~-~~~~~  239 (284)
T cd06620         169 MSPER-IQGGKYTVKSDVWS--LGISIIELALGKFPF-AFSNIDDDGQ-DDPMGILD---LLQQIVQEPPPRLP-SSDFP  239 (284)
T ss_pred             CCHHH-HccCCCCccchHHH--HHHHHHHHHhCCCCC-cccchhhhhh-hhhhHHHH---HHHHHhhccCCCCC-chhcC
Confidence            57998 66678889999999  999999999999999 4332211000 00001111   11222222223331 12367


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ..+.+|+.+|+..||+.||++.++++|+||...
T Consensus       240 ~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         240 EDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            789999999999999999999999999998654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.49  E-value=6.1e-14  Score=98.16  Aligned_cols=89  Identities=31%  Similarity=0.572  Sum_probs=66.3

Q ss_pred             CCCccccCCCC-CCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-CCCCCcchhhh
Q psy9738           1 MAPEGGHHRKQ-YGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~-~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   78 (133)
                      ++||. +.... ++.++|+|+  +|++++++++|+.|| .......               ....+.. ...+.+  +..
T Consensus       168 ~~pe~-~~~~~~~~~~~D~~s--lG~~l~~l~~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~--~~~  226 (258)
T cd06632         168 MAPEV-IAQQGGYGLAADIWS--LGCTVLEMATGKPPW-SQLEGVA---------------AVFKIGRSKELPPI--PDH  226 (258)
T ss_pred             eCHHH-hcCCCCCCchhhhHH--HHHHHHHHHhCCCCc-ccCcHHH---------------HHHHHHhcccCCCc--CCC
Confidence            47888 55444 888999999  999999999999999 4332211               1222222 112233  345


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      .++.+.+|+.+||..+|..||++.+++.|||+
T Consensus       227 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         227 LSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             cCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence            67889999999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.49  E-value=6.5e-14  Score=99.60  Aligned_cols=103  Identities=21%  Similarity=0.300  Sum_probs=63.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhH---------HH-----HHHHhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC---------RQ-----ALYLIA   66 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------~~-----~~~~~~   66 (133)
                      +|||++.....++.++|+|+  +|++++++++|.++| .+......     ...+...         ..     ....+.
T Consensus       167 ~aPE~~~~~~~~~~~~Di~s--lG~~l~~l~tg~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T cd07832         167 RAPELLYGARKYDPGVDLWA--VGCIFAELLNGSPLF-PGENDIEQ-----LAIVFRTLGTPNEETWPGLTSLPDYNKIT  238 (286)
T ss_pred             cCceeeeccccCCchhHHHH--HHHHHHHHHcCCcCc-CCCCHHHH-----HHHHHHHcCCCChHHHhhccCcchhhccc
Confidence            58998334445688999999  999999999998888 44332110     0000000         00     000000


Q ss_pred             hCCCCC--cc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          67 TNKKPE--IK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        67 ~~~~~~--~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      ......  +. .....+..+.+++.+||..+|.+||+++++++||||.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         239 FPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             CCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence            000000  00 0023467889999999999999999999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=9e-15  Score=106.70  Aligned_cols=92  Identities=25%  Similarity=0.357  Sum_probs=68.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||++.....++.++|+||  +|+++++|++|..|| .+.+..                ............++ ...++
T Consensus       163 ~aPE~~~~~~~~~~~~Dvws--lGvil~elltG~~Pf-~~~~~~----------------~~~~~i~~~~~~~~-~~~~~  222 (330)
T cd05586         163 LAPEVLLDEKGYTKHVDFWS--LGVLVFEMCCGWSPF-YAEDTQ----------------QMYRNIAFGKVRFP-KNVLS  222 (330)
T ss_pred             cCHHHHcCCCCCCCccceec--cccEEEEeccCCCCC-CCCCHH----------------HHHHHHHcCCCCCC-CccCC
Confidence            68999334456889999999  999999999999999 543322                12222222222221 13468


Q ss_pred             HHHHHHHHHHhhhcccccC----CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA----SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~----s~~ell~h~~~~~  112 (133)
                      ..+.+|+.+||..||.+|+    ++.++++||||..
T Consensus       223 ~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~  258 (330)
T cd05586         223 DEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFAD  258 (330)
T ss_pred             HHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccC
Confidence            8899999999999999998    7899999999975

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.49  E-value=7.8e-14  Score=100.87  Aligned_cols=111  Identities=24%  Similarity=0.384  Sum_probs=70.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchh---------------------hHHhhHH
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPY---------------------LFILSCR   59 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~---------------------~~~~~~~   59 (133)
                      ++||+ +.+..++.++|+||  +|++++++++|..|| ...........+..                     .......
T Consensus       165 ~aPE~-~~~~~~~~~~Diws--lG~~l~~l~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (308)
T cd06615         165 MSPER-LQGTHYTVQSDIWS--LGLSLVEMAIGRYPI-PPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIF  240 (308)
T ss_pred             cChhH-hcCCCCCccchHHH--HHHHHHHHHhCCCCC-CCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHH
Confidence            47998 77777889999999  999999999999998 43321110000000                     0000000


Q ss_pred             HHHHHhhhCCCCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCC
Q psy9738          60 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  116 (133)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~  116 (133)
                      .....+.....+.++ ....+.++++|+.+||..+|++||++.++++||||......
T Consensus       241 ~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~  296 (308)
T cd06615         241 ELLDYIVNEPPPKLP-SGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAELE  296 (308)
T ss_pred             HHHHHHhcCCCccCc-CcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcccc
Confidence            011111111112221 12357789999999999999999999999999999865433

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.48  E-value=1.4e-14  Score=105.24  Aligned_cols=90  Identities=20%  Similarity=0.350  Sum_probs=69.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+.. ....+  +..++
T Consensus       165 ~aPE~-~~~~~~~~~~Diws--lG~il~el~tg~~p~-~~~~~~~---------------~~~~i~~-~~~~~--p~~~~  222 (318)
T cd05582         165 MAPEV-VNRRGHTQSADWWS--FGVLMFEMLTGSLPF-QGKDRKE---------------TMTMILK-AKLGM--PQFLS  222 (318)
T ss_pred             cCHHH-HcCCCCCCccceec--cceEeeeeccCCCCC-CCCCHHH---------------HHHHHHc-CCCCC--CCCCC
Confidence            68999 77778899999999  999999999999999 5433221               2222222 22333  44578


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~  112 (133)
                      +.+.+++.+||..||.+|++     +.+++.|+||..
T Consensus       223 ~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~  259 (318)
T cd05582         223 PEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFST  259 (318)
T ss_pred             HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence            89999999999999999999     777999999975

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.48  E-value=5.3e-14  Score=103.24  Aligned_cols=106  Identities=25%  Similarity=0.289  Sum_probs=67.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhh--------HHHH-----HHHhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILS--------CRQA-----LYLIAT   67 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~-----~~~~~~   67 (133)
                      ||||++.....++.++|+||  +|++++++++|+.|| .+.+....     ...+..        ....     ......
T Consensus       181 ~aPE~~~~~~~~~~~~Dv~s--lGvil~el~~g~~pf-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (342)
T cd07879         181 RAPEVILNWMHYNQTVDIWS--VGCIMAEMLTGKTLF-KGKDYLDQ-----LTQILKVTGVPGPEFVQKLEDKAAKSYIK  252 (342)
T ss_pred             cChhhhcCccccCchHHHHH--HHHHHHHHHhCCCCC-CCCCHHHH-----HHHHHHhcCCCCHHHHHHhcccchHHHHh
Confidence            58998333356888999999  999999999999999 54432110     000000        0000     000000


Q ss_pred             CCC--C--Ccc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          68 NKK--P--EIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        68 ~~~--~--~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ..+  +  .+. .....+..+.+|+.+||+.||.+||++++++.||||....
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         253 SLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             hcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence            000  0  000 0023467789999999999999999999999999997644

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0690|consensus

Probab=99.48  E-value=4.9e-14  Score=101.90  Aligned_cols=91  Identities=23%  Similarity=0.455  Sum_probs=76.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..|+..+|.|.  +|+++|+|++|+.|| +..++..                +..++......+  |+.++
T Consensus       335 LAPEV-leDnDYgraVDWWG--~GVVMYEMmCGRLPF-yn~dh~k----------------LFeLIl~ed~kF--Pr~ls  392 (516)
T KOG0690|consen  335 LAPEV-LEDNDYGRAVDWWG--VGVVMYEMMCGRLPF-YNKDHEK----------------LFELILMEDLKF--PRTLS  392 (516)
T ss_pred             cCchh-hccccccceeehhh--hhHHHHHHHhccCcc-cccchhH----------------HHHHHHhhhccC--CccCC
Confidence            58999 99999999999999  999999999999999 7655443                444444444555  77899


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~~  113 (133)
                      ++++.++..+|..||.+|.     .+.|+++|+||...
T Consensus       393 ~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v  430 (516)
T KOG0690|consen  393 PEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV  430 (516)
T ss_pred             HHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence            9999999999999999996     47889999999753

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.48  E-value=8.2e-14  Score=101.88  Aligned_cols=111  Identities=23%  Similarity=0.245  Sum_probs=67.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCccc----------chhhHHhhHHHHHHHhhhCCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFL----------IPYLFILSCRQALYLIATNKK   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~   70 (133)
                      ||||.+.....++.++|+||  +|+++++|++|+.|| .+.+.......          .....+.......+.......
T Consensus       176 ~aPE~~~~~~~~~~~~Dvws--lGvil~el~~G~~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (336)
T cd07849         176 RAPEIMLNSKGYTKAIDIWS--VGCILAEMLSNRPLF-PGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFK  252 (336)
T ss_pred             cChHHhhCCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcC
Confidence            68998344567888999999  999999999999999 54321110000          000000000000000000000


Q ss_pred             CCcch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          71 PEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        71 ~~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      +....   ....+..+.+|+.+||..+|.+||++.++++||||+...
T Consensus       253 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         253 PKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             CcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence            11100   123467889999999999999999999999999997543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=7.1e-14  Score=98.33  Aligned_cols=94  Identities=20%  Similarity=0.247  Sum_probs=67.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (133)
                      ++||. ..+..++.++|+|+  +|++++++++|..|| ...+...               ....+.... .........+
T Consensus       160 ~~pe~-~~~~~~~~~~Dv~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  220 (260)
T cd05611         160 LAPET-ILGVGDDKMSDWWS--LGCVIFEFLFGYPPF-HAETPDA---------------VFDNILSRRINWPEEVKEFC  220 (260)
T ss_pred             cChhh-hcCCCCcchhhhHH--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHhcccCCCCcccccC
Confidence            57898 66666888999999  999999999999999 5433221               111111111 1111112356


Q ss_pred             cHHHHHHHHHHhhhcccccCC---HHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRAS---ASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s---~~ell~h~~~~~~  113 (133)
                      +..+.+++.+||..+|+.|++   +.+++.||||+..
T Consensus       221 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~  257 (260)
T cd05611         221 SPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI  257 (260)
T ss_pred             CHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence            889999999999999999995   5799999999753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.48  E-value=2.2e-14  Score=106.43  Aligned_cols=92  Identities=25%  Similarity=0.402  Sum_probs=68.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-CCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +||++|+|++|..|| .+.....               ....+.. .....++....+
T Consensus       211 ~aPE~-~~~~~~~~~~DiwS--lGvilyell~G~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  271 (376)
T cd05598         211 IAPEV-LLRTGYTQLCDWWS--VGVILYEMLVGQPPF-LADTPAE---------------TQLKVINWETTLHIPSQAKL  271 (376)
T ss_pred             cCHHH-HcCCCCCcceeeee--ccceeeehhhCCCCC-CCCCHHH---------------HHHHHhccCccccCCCCCCC
Confidence            68999 77888999999999  999999999999999 5443322               1122211 111222223457


Q ss_pred             cHHHHHHHHHHhhhcccccC---CHHHHhcCccccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRA---SASLLLKHPFLKI  112 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~---s~~ell~h~~~~~  112 (133)
                      ++.+.+++.+|+ .+|.+|+   ++.+++.||||+.
T Consensus       272 s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~  306 (376)
T cd05598         272 SREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG  306 (376)
T ss_pred             CHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence            889999999876 5999999   9999999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.48  E-value=8.3e-14  Score=99.60  Aligned_cols=101  Identities=29%  Similarity=0.467  Sum_probs=69.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch----h
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE----K   76 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~   76 (133)
                      ++||. +.+..++.++|+|+  +|++++++++|..|| ....... ..  +    .+   ....+.....+.+..    .
T Consensus       170 ~~pE~-~~~~~~~~~~Dv~s--lG~il~~l~~g~~p~-~~~~~~~-~~--~----~~---~~~~~~~~~~~~~~~~~~~~  235 (287)
T cd06621         170 MAPER-IQGKPYSITSDVWS--LGLTLLEVAQNRFPF-PPEGEPP-LG--P----IE---LLSYIVNMPNPELKDEPGNG  235 (287)
T ss_pred             cCHHH-hcCCCCCchhhHHH--HHHHHHHHHhCCCCC-CcccCCC-CC--h----HH---HHHHHhcCCchhhccCCCCC
Confidence            57888 77778889999999  999999999999999 4332100 00  0    00   111111111111110    1


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                      ...++.+.+|+.+||..+|++|||+.+++.|+||+....
T Consensus       236 ~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~  274 (287)
T cd06621         236 IKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK  274 (287)
T ss_pred             CchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence            234678899999999999999999999999999965443

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.47  E-value=8.9e-14  Score=102.06  Aligned_cols=106  Identities=20%  Similarity=0.273  Sum_probs=66.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhh-----------------HHHHHH
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILS-----------------CRQALY   63 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~   63 (133)
                      ++||.+.....++.++|+||  +|++++++++|..|| .+......     ...+.+                 ......
T Consensus       182 ~aPE~~~~~~~~~~~~Dvws--lGv~l~elltg~~pf-~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  253 (343)
T cd07851         182 RAPEIMLNWMHYNQTVDIWS--VGCIMAELLTGKTLF-PGSDHIDQ-----LKRIMNLVGTPDEELLQKISSESARNYIQ  253 (343)
T ss_pred             cCHHHHhCCCCCCchHhHHH--HHHHHHHHHhCCCCC-CCCChHHH-----HHHHHHhcCCCCHHHHhhccchhHHHHHH
Confidence            47888333346788999999  999999999999999 54332110     000000                 000000


Q ss_pred             HhhhCCCCCcch-hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          64 LIATNKKPEIKE-KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        64 ~~~~~~~~~~~~-~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      .........+.. ....+..+.+|+.+||..+|.+|||+.+++.||||+...
T Consensus       254 ~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~  305 (343)
T cd07851         254 SLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYH  305 (343)
T ss_pred             hccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccC
Confidence            000000011100 112478899999999999999999999999999997644

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.47  E-value=1.1e-13  Score=96.47  Aligned_cols=89  Identities=30%  Similarity=0.621  Sum_probs=68.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. .....++.++|+|+  +|++++++++|..|| .......               ..........+.+  +...+
T Consensus       166 ~~pe~-~~~~~~~~~~Dv~~--lG~~l~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  224 (254)
T cd06627         166 MAPEV-IEMSGASTASDIWS--LGCTVIELLTGNPPY-YDLNPMA---------------ALFRIVQDDHPPL--PEGIS  224 (254)
T ss_pred             cCHhh-hcCCCCCcchhHHH--HHHHHHHHHhCCCCC-CCccHHH---------------HHHHHhccCCCCC--CCCCC
Confidence            47888 66666788999999  999999999999999 4433221               2222222333333  34567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+.+++.+||..+|++||++.+++.|+||
T Consensus       225 ~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         225 PELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             HHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence            899999999999999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.47  E-value=8.6e-14  Score=100.06  Aligned_cols=95  Identities=22%  Similarity=0.328  Sum_probs=63.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-------------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-------------   67 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------   67 (133)
                      +|||.+.....++.++|+||  +|+++++|++|.+|| .+.+....            .+.......             
T Consensus       193 ~aPE~~~~~~~~~~~~Dv~s--lG~il~el~~g~~~~-~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~  257 (311)
T cd07866         193 RPPELLLGERRYTTAVDIWG--IGCVFAEMFTRRPIL-QGKSDIDQ------------LHLIFKLCGTPTEETWPGWRSL  257 (311)
T ss_pred             CChHHhhCCCccCchhHhHH--HHHHHHHHHhCCCCC-CCCCHHHH------------HHHHHHHhCCCChhhchhhhhc
Confidence            57898344456888999999  999999999999999 54332210            000000000             


Q ss_pred             ----------CCCCCcch-hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          68 ----------NKKPEIKE-KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        68 ----------~~~~~~~~-~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                                ..++.+.. .....+.+.+|+.+||..+|.+|||+.+++.||||
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         258 PGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             ccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence                      00000000 01234678899999999999999999999999997

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.47  E-value=1.2e-13  Score=96.30  Aligned_cols=90  Identities=37%  Similarity=0.632  Sum_probs=67.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-CCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (133)
                      ++||. .....++.++|+|+  +|++++++++|..|| .......              .....+.. ...+.+  +...
T Consensus       170 ~~pE~-~~~~~~~~~~Dv~s--lG~il~~l~~g~~p~-~~~~~~~--------------~~~~~~~~~~~~~~~--~~~~  229 (260)
T cd06606         170 MAPEV-IRGEEYGRAADIWS--LGCTVIEMATGKPPW-SELGNPM--------------AALYKIGSSGEPPEI--PEHL  229 (260)
T ss_pred             cCHhh-hcCCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCchH--------------HHHHhccccCCCcCC--Cccc
Confidence            47888 66666888999999  999999999999999 4333111              01222221 122233  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      +..+.+|+.+|+..+|..||++.+++.||||
T Consensus       230 ~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         230 SEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             CHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            8899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.47  E-value=8.4e-14  Score=101.92  Aligned_cols=109  Identities=14%  Similarity=0.192  Sum_probs=67.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcc------------cchhhHHhhHHHHHHHhhhC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHF------------LIPYLFILSCRQALYLIATN   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~   68 (133)
                      +|||.+.....++.++|+|+  +|++++++++|..|| .+.+.....-            ...+................
T Consensus       175 ~aPE~~~~~~~~~~~~Diws--lG~il~~l~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (337)
T cd07858         175 RAPELLLNCSEYTTAIDVWS--VGCIFAELLGRKPLF-PGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYT  251 (337)
T ss_pred             cChHHHhcCCCCCCcccHHH--HHHHHHHHHcCCCCC-CCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcc
Confidence            57998344456889999999  999999999999999 5432111000            00000000000000000000


Q ss_pred             CCCCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          69 KKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        69 ~~~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ....+. .....++.+.+++.+||+.+|++||++.++++||||..
T Consensus       252 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~  296 (337)
T cd07858         252 PRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS  296 (337)
T ss_pred             cccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence            011110 01246788999999999999999999999999999975

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.47  E-value=8.1e-14  Score=99.73  Aligned_cols=95  Identities=22%  Similarity=0.349  Sum_probs=69.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|++++++++|..|| .+.....            ..+............+  +...+
T Consensus       168 ~aPE~-~~~~~~~~~~Di~s--lG~~l~~l~~g~~P~-~~~~~~~------------~~~~~~~~~~~~~~~~--~~~~~  229 (285)
T cd05632         168 MAPEV-LNNQRYTLSPDYWG--LGCLIYEMIEGQSPF-RGRKEKV------------KREEVDRRVLETEEVY--SAKFS  229 (285)
T ss_pred             cChHH-hcCCCCCcccchHH--HHHHHHHHHhCCCCC-CCCCHHH------------HHHHHHHhhhcccccc--CccCC
Confidence            68999 77778899999999  999999999999999 5433211            0001111111111222  34567


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~~  113 (133)
                      ..+.+|+..||..+|++|++     +.+++.|+||+..
T Consensus       230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         230 EEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             HHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence            88899999999999999999     8899999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0663|consensus

Probab=99.47  E-value=7.7e-14  Score=100.80  Aligned_cols=93  Identities=22%  Similarity=0.215  Sum_probs=70.6

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC----------C-
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK----------K-   70 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-   70 (133)
                      |||.++....|++++|+||  +||++.|++.+.+.| .|.....               ++..|....          . 
T Consensus       245 aPELLLG~~tyst~iDMWS--vGCI~aE~l~~kPlf-~G~sE~d---------------Ql~~If~llGtPte~iwpg~~  306 (419)
T KOG0663|consen  245 APELLLGAKTYSTAVDMWS--VGCIFAELLTQKPLF-PGKSEID---------------QLDKIFKLLGTPSEAIWPGYS  306 (419)
T ss_pred             CHHHhcCCcccCcchhhhh--HHHHHHHHHhcCCCC-CCCchHH---------------HHHHHHHHhCCCccccCCCcc
Confidence            7999788899999999999  999999999999999 7776554               232222100          0 


Q ss_pred             -------CCcc-------h---h-hhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          71 -------PEIK-------E---K-EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        71 -------~~~~-------~---~-~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                             ..++       .   + ..++....+|+..+|.+||.+|.|+++.|.|.||..
T Consensus       307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e  366 (419)
T KOG0663|consen  307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE  366 (419)
T ss_pred             ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence                   0000       0   0 013467889999999999999999999999999986

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.47  E-value=1.1e-13  Score=105.72  Aligned_cols=108  Identities=20%  Similarity=0.237  Sum_probs=65.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCC--CCcccchhhHHhhH----------------HHHH
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPL--RPHFLIPYLFILSC----------------RQAL   62 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~--~~~~~~~~~~~~~~----------------~~~~   62 (133)
                      ||||+ +.+..++.++||||  +|+++|+|++|..++ ......  ...+......+...                ....
T Consensus       329 ~APE~-~~~~~~~~~sDvwS--lGviL~El~~g~~~l-f~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~  404 (461)
T PHA03211        329 NAPEV-LAGDPYTPSVDIWS--AGLVIFEAAVHTASL-FSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQY  404 (461)
T ss_pred             cCHHH-HcCCCCCchHHHHH--HHHHHHHHHHcCCCc-ccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHH
Confidence            68999 77788999999999  999999999887665 332211  10000000000000                0000


Q ss_pred             HH-hhhCCCCC-----cchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          63 YL-IATNKKPE-----IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        63 ~~-~~~~~~~~-----~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      .. ......+.     +......+..+.+|+.+||..||.+|||+.|+|+||||+.
T Consensus       405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        405 RHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             HhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            00 00000000     0001134568899999999999999999999999999974

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.47  E-value=1.1e-13  Score=98.44  Aligned_cols=94  Identities=26%  Similarity=0.369  Sum_probs=68.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||+ ..+..++.++|+|+  +|++++++++|..|| ........            ...+...........  +...+
T Consensus       161 ~~PE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~~------------~~~~~~~~~~~~~~~--~~~~~  222 (277)
T cd05577         161 MAPEV-LQGEVYDFSVDWFA--LGCTLYEMIAGRSPF-RQRKEKVE------------KEELKRRTLEMAVEY--PDKFS  222 (277)
T ss_pred             CCHHH-hcCCCCCchhhhHH--HHHHHHHHhhCCCCC-CCCccccc------------HHHHHhccccccccC--CccCC
Confidence            57898 66677888999999  999999999999999 44332110            001111111112222  34568


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      +.+.+++.+||+.+|.+|+     ++.+++.||||+.
T Consensus       223 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~  259 (277)
T cd05577         223 PEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKD  259 (277)
T ss_pred             HHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhc
Confidence            8999999999999999999     8899999999964

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.47  E-value=9.6e-14  Score=97.56  Aligned_cols=91  Identities=19%  Similarity=0.282  Sum_probs=67.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||+ +....++.++|+|+  +|++++++++|..|| ........            . ..........+..  +...+
T Consensus       166 ~~PE~-~~~~~~~~~~Di~s--lG~~l~~l~~g~~p~-~~~~~~~~------------~-~~~~~~~~~~~~~--~~~~~  226 (258)
T cd05578         166 MAPEV-LCRQGYSVAVDWWS--LGVTAYECLRGKRPY-RGHSRTIR------------D-QIRAKQETADVLY--PATWS  226 (258)
T ss_pred             cCHHH-HcccCCCCcccchh--hHHHHHHHHhCCCCC-CCCCccHH------------H-HHHHHhccccccC--cccCc
Confidence            47898 77777899999999  999999999999999 44332110            0 1111111122222  34567


Q ss_pred             HHHHHHHHHHhhhcccccCCH--HHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA--SLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~--~ell~h~~~  110 (133)
                      ..+.+++.+||..||.+|+++  .+++.||||
T Consensus       227 ~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         227 TEAIDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence            899999999999999999999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.47  E-value=1.5e-13  Score=96.34  Aligned_cols=89  Identities=19%  Similarity=0.302  Sum_probs=67.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||. ..+..++.++|+||  +|+++++|++|..|| .......               ....+........  +...+
T Consensus       168 ~ape~-~~~~~~~~~~Dv~s--lG~i~~~l~~g~~~~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  226 (256)
T cd08221         168 MSPEL-CQGVKYNFKSDIWA--LGCVLYELLTLKRTF-DATNPLN---------------LVVKIVQGNYTPV--VSVYS  226 (256)
T ss_pred             cCHhh-cCCCCCCCcchhHH--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--ccccC
Confidence            47888 66667888999999  999999999999999 5433222               2333332222222  24567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+.+++.+||..+|..||++.++++|+|+
T Consensus       227 ~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         227 SELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence            889999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.47  E-value=1.3e-13  Score=98.65  Aligned_cols=102  Identities=21%  Similarity=0.256  Sum_probs=63.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhh--------HHHHHHHhhhC--C-
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILS--------CRQALYLIATN--K-   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~--~-   69 (133)
                      ||||.+.....++.++|+||  +|+++++|++|.+|| ........     ..++..        .+.........  . 
T Consensus       173 ~aPE~~~~~~~~~~~~Di~s--lG~~l~~l~~g~~~f-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (293)
T cd07843         173 RAPELLLGAKEYSTAIDMWS--VGCIFAELLTKKPLF-PGKSEIDQ-----LNKIFKLLGTPTEKIWPGFSELPGAKKKT  244 (293)
T ss_pred             cCchhhcCCccccchhhHHH--HHHHHHHHHhCCCCC-CCCChHHH-----HHHHHHHhCCCchHHHHHhhccchhcccc
Confidence            68998333345688999999  999999999999999 54332110     000000        00000000000  0 


Q ss_pred             ----CC-Ccc--hhhh-hcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          70 ----KP-EIK--EKEK-LSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        70 ----~~-~~~--~~~~-~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                          .. .+.  .+.. +++.+.+++.+||+.+|++|||+.|++.|+||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         245 FTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             cccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence                00 000  0111 47788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.47  E-value=1.5e-13  Score=98.39  Aligned_cols=92  Identities=23%  Similarity=0.433  Sum_probs=70.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. +....++.++|+||  +|++++++++|..|| .......               ....+. .....+  +...+
T Consensus       165 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~-~~~~~~--~~~~~  222 (290)
T cd05580         165 LAPEI-ILSKGYGKAVDWWA--LGILIYEMLAGYPPF-FDDNPIQ---------------IYEKIL-EGKVRF--PSFFS  222 (290)
T ss_pred             cChhh-hcCCCCCccccHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHh-cCCccC--CccCC
Confidence            58998 66677888999999  999999999999999 4433211               122222 222333  34568


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~~~  114 (133)
                      ..+++++.+||..+|..|+     ++.+++.||||+...
T Consensus       223 ~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         223 PDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             HHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence            8999999999999999999     899999999997533

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.46  E-value=2e-13  Score=96.37  Aligned_cols=89  Identities=30%  Similarity=0.516  Sum_probs=66.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|+.|| .......               ....+.... .+..  +...
T Consensus       176 ~aPE~-~~~~~~~~~~Dv~s--lG~il~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~--~~~~  234 (265)
T cd06652         176 MSPEV-ISGEGYGRKADIWS--VGCTVVEMLTEKPPW-AEFEAMA---------------AIFKIATQPTNPVL--PPHV  234 (265)
T ss_pred             cChhh-hcCCCCCcchhHHH--HHHHHHHHhhCCCCC-CccchHH---------------HHHHHhcCCCCCCC--chhh
Confidence            58998 76777889999999  999999999999999 4332111               122222221 1222  4456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      +..+.+++.+|+. +|..||+++++++|+|++
T Consensus       235 ~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         235 SDHCRDFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             CHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence            7889999999985 899999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.46  E-value=2.7e-14  Score=105.43  Aligned_cols=93  Identities=18%  Similarity=0.336  Sum_probs=67.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC-CCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN-KKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++|+||  +||++++|++|..|| .+.....               ....+... ....++....+
T Consensus       203 ~APE~-~~~~~~~~~~DiwS--lGvilyel~tG~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~p~~~~~  263 (360)
T cd05627         203 IAPEV-FMQTGYNKLCDWWS--LGVIMYEMLIGYPPF-CSETPQE---------------TYRKVMNWKETLVFPPEVPI  263 (360)
T ss_pred             cCHHH-HcCCCCCCcceecc--ccceeeecccCCCCC-CCCCHHH---------------HHHHHHcCCCceecCCCCCC
Confidence            68999 77888999999999  999999999999999 5443322               22222221 11222222236


Q ss_pred             cHHHHHHHHHHhhhcccccC---CHHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRA---SASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~---s~~ell~h~~~~~~  113 (133)
                      +..+++++.+++. +|..|+   ++.+++.||||+..
T Consensus       264 s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         264 SEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             CHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence            7899999998764 899998   58999999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.46  E-value=1.3e-13  Score=99.15  Aligned_cols=107  Identities=19%  Similarity=0.230  Sum_probs=62.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhH---------HhhHHHHHHHhhhCCCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLF---------ILSCRQALYLIATNKKP   71 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~   71 (133)
                      +|||.+.....++.++|+||  +|++++++++|..|| .+.+.......+....         .................
T Consensus       190 ~aPE~~~~~~~~~~~~Di~s--lG~~l~el~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (310)
T cd07865         190 RPPELLLGERDYGPPIDMWG--AGCIMAEMWTRSPIM-QGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQ  266 (310)
T ss_pred             cCcHHhcCCcccCchhhhHH--HHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCcc
Confidence            58998333345788999999  999999999999999 5433211000000000         00000000000000000


Q ss_pred             --Ccc---hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          72 --EIK---EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        72 --~~~---~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                        ...   .+...+..+.+|+.+||..||.+||+++++++||||
T Consensus       267 ~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         267 KRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             chhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence              000   001134677899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.46  E-value=4e-14  Score=103.18  Aligned_cols=90  Identities=22%  Similarity=0.376  Sum_probs=68.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+. .....+  +...+
T Consensus       163 ~aPE~-~~~~~~~~~~Dvws--lG~il~el~~G~~pf-~~~~~~~---------------~~~~~~-~~~~~~--~~~~~  220 (325)
T cd05604         163 LAPEV-IRKQPYDNTVDWWC--LGAVLYEMLYGLPPF-YCRDVAE---------------MYDNIL-HKPLVL--RPGAS  220 (325)
T ss_pred             CCHHH-HcCCCCCCcCcccc--ccceehhhhcCCCCC-CCCCHHH---------------HHHHHH-cCCccC--CCCCC
Confidence            68999 77888999999999  999999999999999 5433221               222222 222222  23467


Q ss_pred             HHHHHHHHHHhhhcccccCCH----HHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA----SLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~----~ell~h~~~~~  112 (133)
                      ..+.+++.+||..+|.+|+++    .+++.||||..
T Consensus       221 ~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~  256 (325)
T cd05604         221 LTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFES  256 (325)
T ss_pred             HHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence            888999999999999999976    58999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.46  E-value=1.3e-13  Score=98.12  Aligned_cols=102  Identities=30%  Similarity=0.442  Sum_probs=64.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHH----HHHHhh-------hCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ----ALYLIA-------TNK   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-------~~~   69 (133)
                      +|||++.....++.++|+||  +|++++++++|.+|| ........     ...+..+..    ......       ...
T Consensus       167 ~aPE~~~~~~~~~~~~Dv~s--lG~~l~el~~g~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T cd07846         167 RAPELLVGDTKYGRAVDIWA--VGCLVTEMLTGEPLF-PGDSDIDQ-----LYHIIKCLGNLIPRHQEIFQKNPLFAGMR  238 (286)
T ss_pred             cCcHHhccccccCchHhHHH--HHHHHHHHHcCCCCC-CCCchHHH-----HHHHHHHhCCCchhhHHHhccchHhhccc
Confidence            58998333455778899999  999999999999988 44332110     000000000    000000       000


Q ss_pred             CCCcc-------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          70 KPEIK-------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        70 ~~~~~-------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      .+...       ....++..+.+|+.+||..+|++||++.++++|+||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            01100       012356789999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.46  E-value=6.9e-14  Score=101.69  Aligned_cols=90  Identities=20%  Similarity=0.324  Sum_probs=69.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+..                .........+..+  +...+
T Consensus       163 ~aPE~-~~~~~~~~~~Diws--lG~il~el~~g~~pf-~~~~~~----------------~~~~~i~~~~~~~--~~~~~  220 (321)
T cd05603         163 LAPEV-LRKEPYDRTVDWWC--LGAVLYEMLYGLPPF-YSRDVS----------------QMYDNILHKPLQL--PGGKT  220 (321)
T ss_pred             CCHHH-hcCCCCCCcCcccc--cchhhhhhhcCCCCC-CCCCHH----------------HHHHHHhcCCCCC--CCCCC
Confidence            68999 77788999999999  999999999999999 544321                2222222233333  34567


Q ss_pred             HHHHHHHHHHhhhcccccCCH----HHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA----SLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~----~ell~h~~~~~  112 (133)
                      ..+.+++.+||+.+|.+|+++    .++++|+||..
T Consensus       221 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~  256 (321)
T cd05603         221 VAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSP  256 (321)
T ss_pred             HHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence            889999999999999999865    58999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.46  E-value=1.3e-13  Score=100.61  Aligned_cols=96  Identities=25%  Similarity=0.255  Sum_probs=66.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh----CC-------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT----NK-------   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------   69 (133)
                      ++||.+.....++.++|+||  +|++++++++|.+|| .+.+...               ....+..    ..       
T Consensus       200 ~aPE~~~~~~~~~~~~Dv~s--lG~~l~el~tg~~p~-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  261 (335)
T PTZ00024        200 RAPELLMGAEKYHFAVDMWS--VGCIFAELLTGKPLF-PGENEID---------------QLGRIFELLGTPNEDNWPQA  261 (335)
T ss_pred             CCChhcccCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHHHhCCCchhhCcch
Confidence            57898333345788999999  999999999999999 5443221               1110000    00       


Q ss_pred             -------------CCCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          70 -------------KPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        70 -------------~~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                                   +.... .....+..+.+++.+||..+|++||++++++.|+||+...
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~  320 (335)
T PTZ00024        262 KKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP  320 (335)
T ss_pred             hhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence                         00000 0123467889999999999999999999999999998644

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.46  E-value=1.6e-13  Score=98.33  Aligned_cols=109  Identities=18%  Similarity=0.205  Sum_probs=67.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHH-----HHH-------HHhhhC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCR-----QAL-------YLIATN   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~-------~~~~~~   68 (133)
                      +|||.+.....++.++|+|+  +|++++++++|.++| .+..... .+    .++....     ...       ......
T Consensus       169 ~aPE~~~~~~~~~~~~Dv~s--lG~il~e~~~g~~~~-~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (298)
T cd07841         169 RAPELLFGARHYGVGVDMWS--VGCIFAELLLRVPFL-PGDSDID-QL----GKIFEALGTPTEENWPGVTSLPDYVEFK  240 (298)
T ss_pred             eCHHHHhCCCCCCcHHHHHH--HHHHHHHHHcCCccc-cCCccHH-HH----HHHHHHcCCCchhhhhhccccccccccc
Confidence            47888334456788999999  999999999998777 5433221 00    0000000     000       000000


Q ss_pred             CCCCcc---hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCC
Q psy9738          69 KKPEIK---EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  117 (133)
Q Consensus        69 ~~~~~~---~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~  117 (133)
                      ..+..+   .....+..+.+|+.+||..+|.+||++.+++.|+||+....+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~  292 (298)
T cd07841         241 PFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPT  292 (298)
T ss_pred             ccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCC
Confidence            000000   0123467889999999999999999999999999998765443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.46  E-value=1.4e-13  Score=96.18  Aligned_cols=89  Identities=24%  Similarity=0.331  Sum_probs=67.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. ..+..++.++|+|+  +|++++++++|..|| ...+...               ....+.....+.+  +...+
T Consensus       168 ~~Pe~-~~~~~~~~~~D~~s--lG~~~~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  226 (256)
T cd08530         168 MAPEV-WKGRPYSYKSDIWS--LGCLLYEMATFAPPF-EARSMQD---------------LRYKVQRGKYPPI--PPIYS  226 (256)
T ss_pred             cCHHH-HCCCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHhcCCCCCC--chhhC
Confidence            46888 66777888999999  999999999999999 4332211               1222222333333  34678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      .++++++.+||..+|.+||++.++++||++
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         227 QDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence            889999999999999999999999999975

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG1290|consensus

Probab=99.46  E-value=4.6e-14  Score=105.93  Aligned_cols=107  Identities=28%  Similarity=0.302  Sum_probs=69.0

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCC--CCCCCCCCcccchhhHHhhHHHH------------------
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLI--WNENPLRPHFLIPYLFILSCRQA------------------   61 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~--~~~~~~~~~~~~~~~~~~~~~~~------------------   61 (133)
                      |||+ +.+.+|+.++||||  ++|+.||+.||...|.  .+.+...+.-.|.  -|+++-..                  
T Consensus       419 apEV-llGsgY~~~ADiWS--~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA--~i~ELLG~iPr~ia~~Gk~SRdFFnr  493 (590)
T KOG1290|consen  419 APEV-LLGSGYSTSADIWS--TACMAFELATGDYLFEPHSGENYSRDEDHIA--LIMELLGKIPRKIALGGKYSRDFFNR  493 (590)
T ss_pred             Ccce-eecCCCCCchhHHH--HHHHHHHhhcCceeecCCCCCCCCccHHHHH--HHHHHHhhccHHHHhcCcchHhhhcc
Confidence            7999 88999999999999  9999999999998883  1111111100000  01111000                  


Q ss_pred             ---HHHhhhCCCCCcch--------hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          62 ---LYLIATNKKPEIKE--------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        62 ---~~~~~~~~~~~~~~--------~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                         +..|..-+++.+..        +.....++.+||.-||+++|.+|+||.++|+|||++..
T Consensus       494 ~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~  556 (590)
T KOG1290|consen  494 RGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPV  556 (590)
T ss_pred             ccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccccCC
Confidence               01111112222210        22334678899999999999999999999999999853

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.46  E-value=7.3e-14  Score=97.50  Aligned_cols=84  Identities=20%  Similarity=0.287  Sum_probs=64.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      |+||. .....++.++|+||  +|++++++++|..++ .. .+..                .   .......+  +..++
T Consensus       149 ~aPE~-~~~~~~~~~~Dvws--lG~il~el~~g~~~~-~~-~~~~----------------~---~~~~~~~~--~~~~~  202 (237)
T cd05576         149 CAPEV-GGISEETEACDWWS--LGAILFELLTGKTLV-EC-HPSG----------------I---NTHTTLNI--PEWVS  202 (237)
T ss_pred             cCCcc-cCCCCCCchhhHHH--HHHHHHHHHHCcchh-hc-Cchh----------------c---ccccccCC--cccCC
Confidence            68998 77778889999999  999999999999887 32 2111                0   00011122  34567


Q ss_pred             HHHHHHHHHHhhhcccccCCH-----HHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA-----SLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~-----~ell~h~~~  110 (133)
                      ..+++++.+||+.||++|+++     ++++.||||
T Consensus       203 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         203 EEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             HHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            889999999999999999985     899999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.46  E-value=8.3e-14  Score=99.10  Aligned_cols=85  Identities=12%  Similarity=0.198  Sum_probs=65.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||. +....++.++|+||  +|++++++++ |..|| .+.....               ....+.....+..  +...
T Consensus       193 ~aPE~-~~~~~~~~~sDv~s--lG~il~el~~~g~~p~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  251 (283)
T cd05048         193 MPPEA-ILYGKFTTESDIWS--FGVVLWEIFSYGLQPY-YGFSNQE---------------VIEMIRSRQLLPC--PEDC  251 (283)
T ss_pred             cCHHH-hccCcCchhhhHHH--HHHHHHHHHcCCCCCC-CCCCHHH---------------HHHHHHcCCcCCC--cccC
Confidence            68998 66778899999999  9999999997 99999 5443222               2222333332333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|+..+|.+||++.++++
T Consensus       252 ~~~~~~l~~~c~~~~p~~Rp~~~~i~~  278 (283)
T cd05048         252 PARVYALMIECWNEIPARRPRFKDIHT  278 (283)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.46  E-value=5.9e-14  Score=102.26  Aligned_cols=90  Identities=23%  Similarity=0.424  Sum_probs=69.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+ ......+  +..++
T Consensus       163 ~aPE~-~~~~~~~~~~Diws--lG~il~el~~g~~pf-~~~~~~~---------------~~~~i-~~~~~~~--~~~~~  220 (325)
T cd05602         163 LAPEV-LHKQPYDRTVDWWC--LGAVLYEMLYGLPPF-YSRNTAE---------------MYDNI-LNKPLQL--KPNIT  220 (325)
T ss_pred             cCHHH-HcCCCCCCcccccc--ccHHHHHHhcCCCCC-CCCCHHH---------------HHHHH-HhCCcCC--CCCCC
Confidence            68999 77888999999999  999999999999999 5433222               22222 2222222  34578


Q ss_pred             HHHHHHHHHHhhhcccccCCHH----HHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASAS----LLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~----ell~h~~~~~  112 (133)
                      ..+.+++.+||+.+|.+|+++.    ++++|+||..
T Consensus       221 ~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~  256 (325)
T cd05602         221 NSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSP  256 (325)
T ss_pred             HHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCC
Confidence            8999999999999999999865    7889999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.45  E-value=2.3e-13  Score=96.72  Aligned_cols=91  Identities=21%  Similarity=0.257  Sum_probs=64.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-------------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-------------   67 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------   67 (133)
                      ++||+ +.+..++.++|+|+  +|+++++|++|.+|| .+.....               ....+..             
T Consensus       173 ~~PE~-~~~~~~~~~~Di~s--~G~~l~~l~~~~~~~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd07838         173 RAPEV-LLQSSYATPVDMWS--VGCIFAELFRRRPLF-RGTSEAD---------------QLDKIFDVIGLPSEEEWPRN  233 (287)
T ss_pred             cChHH-hccCCCCCcchhhh--HHHHHHHHHhCCCcc-cCCChHH---------------HHHHHHHHcCCCChHhcCCC
Confidence            57898 77777889999999  999999999999998 5433211               0100000             


Q ss_pred             --------CC--CCCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          68 --------NK--KPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        68 --------~~--~~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                              ..  ..... .....+..+.+++.+||..||..||++.+++.||||
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence                    00  00000 012345778899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.45  E-value=1.5e-13  Score=97.30  Aligned_cols=88  Identities=19%  Similarity=0.340  Sum_probs=66.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||+ .....++.++|+|+  +|++++++++|+.|| .......               ....+. .....+  +...+
T Consensus       189 ~~Pe~-~~~~~~~~~~Di~s--lG~~l~~l~~g~~p~-~~~~~~~---------------~~~~~~-~~~~~~--~~~~~  246 (280)
T cd05581         189 VSPEL-LNEKPAGKSSDLWA--LGCIIYQMLTGKPPF-RGSNEYL---------------TFQKIL-KLEYSF--PPNFP  246 (280)
T ss_pred             cCHHH-hCCCCCChhhhHHH--HHHHHHHHHhCCCCC-CCccHHH---------------HHHHHH-hcCCCC--CCccC
Confidence            47887 66667888999999  999999999999999 4333211               111111 222222  34568


Q ss_pred             HHHHHHHHHHhhhcccccCCH----HHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA----SLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~----~ell~h~~~  110 (133)
                      +.+.+|+.+||..+|++||++    ++++.||||
T Consensus       247 ~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         247 PDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             HHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            889999999999999999999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.45  E-value=2e-13  Score=99.78  Aligned_cols=112  Identities=21%  Similarity=0.207  Sum_probs=68.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCc------ccchhhHHhh-H-HHHHHH-h-hhCCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPH------FLIPYLFILS-C-RQALYL-I-ATNKK   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~------~~~~~~~~~~-~-~~~~~~-~-~~~~~   70 (133)
                      ++||.+.....++.++|+|+  +|+++++|++|+.|| .+.+.....      ...+...... . ...... . .....
T Consensus       178 ~~PE~~~~~~~~~~~~Di~s--lG~~l~el~~g~~pf-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  254 (334)
T cd07855         178 RAPELLLSLPEYTTAIDMWS--VGCIFAEMLGRRQLF-PGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRK  254 (334)
T ss_pred             cChHHhcCCcccccccchHH--HHHHHHHHHcCCCcc-CCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccC
Confidence            47888333356888999999  999999999999999 544322100      0000000000 0 000000 0 00011


Q ss_pred             CCcch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          71 PEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        71 ~~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                      .....   ....+..+.+++.+||+.+|.+||++++++.||||.....
T Consensus       255 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~  302 (334)
T cd07855         255 QPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHD  302 (334)
T ss_pred             CCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccC
Confidence            11110   1235788999999999999999999999999999975443

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.45  E-value=1.7e-13  Score=97.21  Aligned_cols=101  Identities=19%  Similarity=0.261  Sum_probs=64.7

Q ss_pred             CCCccccCCC-CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhH----------------HHHHH
Q psy9738           1 MAPEGGHHRK-QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC----------------RQALY   63 (133)
Q Consensus         1 maPE~~~~~~-~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~   63 (133)
                      ++||. +.+. .++.++|+|+  +|++++++++|+.|| .+.+...+     ...+...                .....
T Consensus       165 ~~PE~-~~~~~~~~~~~Di~s--lG~~l~~l~tg~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (283)
T cd05118         165 RAPEL-LLGDKGYSTPVDIWS--VGCIFAELLSRRPLF-PGKSEIDQ-----LFKIFRTLGTPDPEVWPKFTSLARNYKF  235 (283)
T ss_pred             cCcHH-HhcCCCCCchhHHHH--HHHHHHHHHhCCCCC-CCCCHHHH-----HHHHHHHcCCCchHhcccchhhhhhhhh
Confidence            47898 4444 7888999999  999999999999999 54432210     0000000                00000


Q ss_pred             HhhhCCCCCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          64 LIATNKKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        64 ~~~~~~~~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ........... .....+..+.+|+.+||..||.+||++.+++.||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         236 SFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             hhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            00000000000 013457889999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.45  E-value=2e-13  Score=95.72  Aligned_cols=92  Identities=25%  Similarity=0.350  Sum_probs=67.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. .....++.++|+|+  +|++++++++|..|| .......               ....+.. .....+.....+
T Consensus       168 ~~Pe~-~~~~~~~~~~Dv~s--lG~~~~~l~~g~~p~-~~~~~~~---------------~~~~~~~-~~~~~~~~~~~~  227 (265)
T cd05579         168 IAPEV-ILGQGHSKTVDWWS--LGCILYEFLVGIPPF-HGETPEE---------------IFQNILN-GKIEWPEDVEVS  227 (265)
T ss_pred             cCHHH-hcCCCCCcchhhHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHhc-CCcCCCccccCC
Confidence            47888 65666788999999  999999999999999 4333211               1112211 112221112247


Q ss_pred             HHHHHHHHHHhhhcccccCCH---HHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA---SLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~---~ell~h~~~~~  112 (133)
                      ..+.+|+.+||+.+|.+||++   .+++.||||+.
T Consensus       228 ~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~  262 (265)
T cd05579         228 DEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG  262 (265)
T ss_pred             HHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence            899999999999999999999   99999999974

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0986|consensus

Probab=99.45  E-value=7.5e-14  Score=104.23  Aligned_cols=94  Identities=23%  Similarity=0.352  Sum_probs=72.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +..+.|+.++|.|+  +||++|+|+.|+.|| ........            ++.........+..+  +.+++
T Consensus       353 MAPEv-l~ne~Y~~s~Dwf~--lGCllYemi~G~sPF-r~~KeKvk------------~eEvdrr~~~~~~ey--~~kFS  414 (591)
T KOG0986|consen  353 MAPEV-LQNEVYDFSPDWFS--LGCLLYEMIAGHSPF-RQRKEKVK------------REEVDRRTLEDPEEY--SDKFS  414 (591)
T ss_pred             cCHHH-HcCCcccCCccHHH--HHhHHHHHHcccCch-hhhhhhhh------------HHHHHHHHhcchhhc--ccccC
Confidence            89999 88888999999999  999999999999999 54322210            001222233333444  46789


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~  112 (133)
                      ++++++.+..|..||.+|..     +.++.+||||+.
T Consensus       415 ~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~  451 (591)
T KOG0986|consen  415 EEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKD  451 (591)
T ss_pred             HHHHHHHHHHHccCHHHhccCCCcCcchhhhCccccc
Confidence            99999999999999999974     568999999985

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.45  E-value=1.9e-13  Score=96.73  Aligned_cols=91  Identities=32%  Similarity=0.581  Sum_probs=64.6

Q ss_pred             CCCccccCCC--CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhh-hCCCCCcch--
Q psy9738           1 MAPEGGHHRK--QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIA-TNKKPEIKE--   75 (133)
Q Consensus         1 maPE~~~~~~--~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--   75 (133)
                      ++||. +...  .++.++|+|+  +|++++++++|..|| .......               ....+. ......++.  
T Consensus       177 ~~PE~-~~~~~~~~~~~~Dv~s--lG~~l~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~  237 (272)
T cd06629         177 MAPEV-IHSYSQGYSAKVDIWS--LGCVVLEMFAGRRPW-SDEEAIA---------------AMFKLGNKRSAPPIPPDV  237 (272)
T ss_pred             cCHHH-hccccCCCCccchhHH--HHHHHHHHHhCCCCC-cCcchHH---------------HHHHhhccccCCcCCccc
Confidence            47888 5443  3788999999  999999999999999 4332211               111111 111111111  


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ...++..+.+++.+||..+|+.||++.++++|||+
T Consensus       238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         238 SMNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             cccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            12457899999999999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.45  E-value=8.3e-14  Score=99.76  Aligned_cols=100  Identities=19%  Similarity=0.245  Sum_probs=66.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhh--------------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIA--------------   66 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------   66 (133)
                      ++||++.....++.++|+||  +|++++++++|.+|| ........           ..+......              
T Consensus       170 ~~PE~~~~~~~~~~~~Dv~s--lG~i~~~l~tg~~pf-~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~  235 (294)
T PLN00009        170 RAPEILLGSRHYSTPVDIWS--VGCIFAEMVNQKPLF-PGDSEIDE-----------LFKIFRILGTPNEETWPGVTSLP  235 (294)
T ss_pred             cCHHHHhCCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCCHHHH-----------HHHHHHHhCCCChhhccccccch
Confidence            57898333456788999999  999999999999999 54332110           000000000              


Q ss_pred             -----hCCCCCcc---hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          67 -----TNKKPEIK---EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        67 -----~~~~~~~~---~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                           ........   .....+..+.+++.+||..+|.+||++.++++||||....
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~  291 (294)
T PLN00009        236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG  291 (294)
T ss_pred             hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence                 00000000   0123567889999999999999999999999999998643

>KOG0591|consensus

Probab=99.44  E-value=1e-13  Score=98.38  Aligned_cols=81  Identities=21%  Similarity=0.408  Sum_probs=69.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      |+||. +.+.+|+.++||||  +||++|||..-++|| .+++-..               ...+|.....++++. ...+
T Consensus       195 MSPE~-i~~~~Y~~kSDiWs--lGCllyEMcaL~~PF-~g~n~~~---------------L~~KI~qgd~~~~p~-~~YS  254 (375)
T KOG0591|consen  195 MSPER-IHESGYNFKSDIWS--LGCLLYEMCALQSPF-YGDNLLS---------------LCKKIEQGDYPPLPD-EHYS  254 (375)
T ss_pred             cCHHH-HhcCCCCcchhHHH--HHHHHHHHHhcCCCc-ccccHHH---------------HHHHHHcCCCCCCcH-HHhh
Confidence            89999 99999999999999  999999999999999 8876544               566666666566631 6789


Q ss_pred             HHHHHHHHHHhhhcccccCCH
Q psy9738          81 QIFQDFLDQCLEEEVETRASA  101 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~  101 (133)
                      .++..++..|+..|+..||+.
T Consensus       255 ~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  255 TDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             hHHHHHHHHHccCCcccCCCc
Confidence            999999999999999999984

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.44  E-value=3.3e-14  Score=99.65  Aligned_cols=94  Identities=24%  Similarity=0.393  Sum_probs=64.4

Q ss_pred             CCCccccC-CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhhh
Q psy9738           1 MAPEGGHH-RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~-~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   78 (133)
                      +|||+ +. +..++.++|+||  +|+++++|++|..|| .......            ............. ........
T Consensus       165 ~aPE~-~~~~~~~~~~~Di~s--lG~il~~l~~~~~p~-~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~  228 (260)
T PF00069_consen  165 MAPEV-LQQGKKYTRKSDIWS--LGIILYELLTGKLPF-EESNSDD------------QLEIIEKILKRPLPSSSQQSRE  228 (260)
T ss_dssp             SCHHH-HTTTSSBSTHHHHHH--HHHHHHHHHHSSSSS-TTSSHHH------------HHHHHHHHHHTHHHHHTTSHTT
T ss_pred             ccccc-ccccccccccccccc--ccccccccccccccc-ccccchh------------hhhhhhhcccccccccccccch
Confidence            57898 66 778899999999  999999999999999 4331001            0001111110000 00000111


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ....+.+++.+||..||.+||++.++++||||
T Consensus       229 ~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  229 KSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             SHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             hHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence            24789999999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.44  E-value=1.4e-13  Score=102.31  Aligned_cols=94  Identities=19%  Similarity=0.397  Sum_probs=66.5

Q ss_pred             CCCccccCCC----CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcch
Q psy9738           1 MAPEGGHHRK----QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKE   75 (133)
Q Consensus         1 maPE~~~~~~----~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   75 (133)
                      ||||+ +...    .++.++|+||  +|+++++|++|..|| .+.+...               ....+.... ...++.
T Consensus       210 ~aPE~-~~~~~~~~~~~~~~DiwS--lG~ilyell~G~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~p~  270 (370)
T cd05621         210 ISPEV-LKSQGGDGYYGRECDWWS--VGVFLFEMLVGDTPF-YADSLVG---------------TYSKIMDHKNSLNFPE  270 (370)
T ss_pred             CCHHH-HhccCCCCCCCcccCEEe--ehHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhCCcccCCCC
Confidence            68998 5432    3788999999  999999999999999 5443222               222222211 123322


Q ss_pred             hhhhcHHHHHHHHHHhhhccc--ccCCHHHHhcCcccccC
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVE--TRASASLLLKHPFLKIA  113 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~--~R~s~~ell~h~~~~~~  113 (133)
                      ...++..+++++.+||..++.  .|+++.++++||||+..
T Consensus       271 ~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         271 DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            335688999999999975554  38899999999999763

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.44  E-value=1.7e-13  Score=97.25  Aligned_cols=85  Identities=11%  Similarity=0.233  Sum_probs=64.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++ |..|| .+.+...               ....+........  +...
T Consensus       191 ~aPE~-~~~~~~~~~~Di~s--lG~il~e~~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  249 (280)
T cd05049         191 MPPES-IMYRKFTTESDVWS--FGVVLWEIFTYGKQPW-YGLSNEE---------------VIECITQGRLLQR--PRTC  249 (280)
T ss_pred             cChhh-hccCCcchhhhHHH--HHHHHHHHHhcCCCCC-CCCCHHH---------------HHHHHHcCCcCCC--CCCC
Confidence            58999 77788999999999  9999999998 99998 5433222               2222222222222  3457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|..||++.++++
T Consensus       250 ~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         250 PSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.44  E-value=1.5e-13  Score=96.99  Aligned_cols=91  Identities=31%  Similarity=0.610  Sum_probs=64.0

Q ss_pred             CCCcccc--CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC--CCCCcchh
Q psy9738           1 MAPEGGH--HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN--KKPEIKEK   76 (133)
Q Consensus         1 maPE~~~--~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~   76 (133)
                      +|||.+.  ....++.++|+||  +|+++++|++|..|| .......               ....+...  ..+.....
T Consensus       173 ~~PE~~~~~~~~~~~~~~Dvws--~G~il~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~  234 (267)
T cd06646         173 MAPEVAAVEKNGGYNQLCDIWA--VGITAIELAELQPPM-FDLHPMR---------------ALFLMSKSNFQPPKLKDK  234 (267)
T ss_pred             cCHhHcccccCCCCcchhhHHH--HHHHHHHHHhCCCCc-cccchhh---------------hheeeecCCCCCCCCccc
Confidence            5788822  2345778899999  999999999999999 4433222               11111111  11222222


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcc
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPF  109 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~  109 (133)
                      ...+..+.+|+.+||..+|++||+++++++|+|
T Consensus       235 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         235 TKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             cccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence            346789999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.44  E-value=2.5e-13  Score=96.60  Aligned_cols=102  Identities=23%  Similarity=0.251  Sum_probs=64.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHH-----HHHHHhhh-----CCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCR-----QALYLIAT-----NKK   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-----~~~   70 (133)
                      ++||++.....++.++|+|+  +|++++++++|..|| .+.+... .    ...+....     ........     ...
T Consensus       167 ~~PE~~~~~~~~~~~~Dv~s--lG~~l~~l~~g~~~~-~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07836         167 RAPDVLLGSRTYSTSIDIWS--VGCIMAEMITGRPLF-PGTNNED-Q----LLKIFRIMGTPTESTWPGISQLPEYKPTF  238 (284)
T ss_pred             cChHHhcCCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCCcHH-H----HHHHHHHhCCCChhhHHHHhcCchhcccc
Confidence            57898334455788999999  999999999999999 5443211 0    00000000     00000000     000


Q ss_pred             CCcch------hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          71 PEIKE------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        71 ~~~~~------~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      +....      ....+..+++++.+|++.+|.+||++.++++||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         239 PRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             cCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            00000      12346788999999999999999999999999997

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.44  E-value=1.2e-13  Score=98.19  Aligned_cols=86  Identities=12%  Similarity=0.230  Sum_probs=64.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       188 ~aPE~-~~~~~~~~~~Diws--lG~il~el~~~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  246 (277)
T cd05036         188 MPPEA-FLDGIFTSKTDVWS--FGVLLWEIFSLGYMPY-PGRTNQE---------------VMEFVTGGGRLDP--PKGC  246 (277)
T ss_pred             CCHHH-HhcCCcCchhHHHH--HHHHHHHHHcCCCCCC-CCCCHHH---------------HHHHHHcCCcCCC--CCCC
Confidence            68999 66777999999999  9999999996 88999 4332211               1222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      +..+.+++.+|++.+|+.||++.++++|
T Consensus       247 ~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         247 PGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            7889999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.44  E-value=3e-13  Score=96.27  Aligned_cols=101  Identities=26%  Similarity=0.446  Sum_probs=64.2

Q ss_pred             CCCccccCCC-CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHH----HHHHHhh-hC------
Q psy9738           1 MAPEGGHHRK-QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCR----QALYLIA-TN------   68 (133)
Q Consensus         1 maPE~~~~~~-~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~------   68 (133)
                      ||||+ +.+. .++.++|+||  +|++++++++|.+|| .+...... ..    .+....    ....... ..      
T Consensus       168 ~~PE~-~~~~~~~~~~~Dv~s--lG~~l~~l~~g~~~~-~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07833         168 RAPEL-LVGDTNYGKPVDVWA--IGCIMAELLDGEPLF-PGDSDIDQ-LY----LIQKCLGPLPPSHQELFSSNPRFAGV  238 (288)
T ss_pred             cCCch-hcCCCCcCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHHH-HH----HHHHHhCCCCHHHhhhcccCcccccc
Confidence            68999 5555 7888999999  999999999999999 43321110 00    000000    0000000 00      


Q ss_pred             CCCCcc--------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          69 KKPEIK--------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        69 ~~~~~~--------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ..+...        .+...+..+.+|+.+||..+|++||++++++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence            000000        012247889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.43  E-value=2.8e-13  Score=94.53  Aligned_cols=88  Identities=25%  Similarity=0.446  Sum_probs=67.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. ..+..++.++|+|+  +|++++++++|..|| .......               ....+.. ....+  +...+
T Consensus       160 ~~Pe~-~~~~~~~~~~D~~s--lG~~~~~l~~g~~p~-~~~~~~~---------------~~~~~~~-~~~~~--~~~~~  217 (250)
T cd05123         160 LAPEV-LLGKGYGKAVDWWS--LGVLLYEMLTGKPPF-YAEDRKE---------------IYEKILK-DPLRF--PEFLS  217 (250)
T ss_pred             cChHH-hCCCCCCchhhHHH--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHhc-CCCCC--CCCCC
Confidence            47888 66666788899999  999999999999999 4332211               1222222 22333  44568


Q ss_pred             HHHHHHHHHHhhhcccccCCH---HHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA---SLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~---~ell~h~~~  110 (133)
                      ..+.+++.+||..||..||++   .+++.||||
T Consensus       218 ~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         218 PEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             HHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            899999999999999999999   999999997

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.43  E-value=2.9e-13  Score=104.31  Aligned_cols=107  Identities=18%  Similarity=0.175  Sum_probs=65.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhH-----------HHHHHHhhhC-
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC-----------RQALYLIATN-   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~-   68 (133)
                      ||||+ +.+..|+.++||||  +||++++|++|..++ .+........  ....+...           ...+...... 
T Consensus       335 ~aPE~-~~~~~~~~~~DiwS--lGvil~ell~~~~~p-~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~  408 (501)
T PHA03210        335 NSPEI-LAGDGYCEITDIWS--CGLILLDMLSHDFCP-IGDGGGKPGK--QLLKIIDSLSVCDEEFPDPPCKLFDYIDSA  408 (501)
T ss_pred             CCchh-hcCCCCCcHHHHHH--HHHHHHHHHHCCCCC-ccCCCCCHHH--HHHHHHHhcccChhhcCCcHHHHHHHhhhh
Confidence            58999 77888999999999  999999999987544 2322111000  00000000           0000000000 


Q ss_pred             ---CC----CCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          69 ---KK----PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        69 ---~~----~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                         ..    +.+.....++..+.+++.+||..||.+|||+.|+|.||||...
T Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        409 EIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE  460 (501)
T ss_pred             hcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence               00    0000111245678889999999999999999999999999764

>KOG4721|consensus

Probab=99.43  E-value=1.2e-13  Score=105.79  Aligned_cols=95  Identities=20%  Similarity=0.287  Sum_probs=72.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.....+.++||||  ||+++|||++|..|| ..-+...               .++.+..+. ..++-|...+
T Consensus       278 MAPEv-IrnePcsEKVDIwS--fGVVLWEmLT~EiPY-kdVdssA---------------IIwGVGsNs-L~LpvPstcP  337 (904)
T KOG4721|consen  278 MAPEV-IRNEPCSEKVDIWS--FGVVLWEMLTGEIPY-KDVDSSA---------------IIWGVGSNS-LHLPVPSTCP  337 (904)
T ss_pred             hCHHH-hhcCCcccccceeh--hHHHHHHHHhcCCCc-cccchhe---------------eEEeccCCc-ccccCcccCc
Confidence            89999 99999999999999  999999999999999 5443333               222222221 2232256678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                      ..++-|+++||.-.|..||++.+++.|==+....-
T Consensus       338 ~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pel  372 (904)
T KOG4721|consen  338 DGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPEL  372 (904)
T ss_pred             hHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHH
Confidence            89999999999999999999999998865554443

>KOG0580|consensus

Probab=99.42  E-value=1.8e-13  Score=94.96  Aligned_cols=90  Identities=14%  Similarity=0.237  Sum_probs=73.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||+ +.+..++..+|+|+  +|++.|+++.|.+|| .......               ....+.... ..+  |..++
T Consensus       189 l~pEm-v~~~~hd~~Vd~w~--lgvl~yeflvg~ppF-es~~~~e---------------tYkrI~k~~-~~~--p~~is  246 (281)
T KOG0580|consen  189 LPPEM-VEGRGHDKFVDLWS--LGVLCYEFLVGLPPF-ESQSHSE---------------TYKRIRKVD-LKF--PSTIS  246 (281)
T ss_pred             CCHhh-cCCCCccchhhHHH--HHHHHHHHHhcCCch-hhhhhHH---------------HHHHHHHcc-ccC--CcccC
Confidence            47999 99999999999999  999999999999999 5544322               333333322 333  56789


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ..++|+|.+||..+|..|....+++.|||+..
T Consensus       247 ~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  247 GGAADLISRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             hhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence            99999999999999999999999999999864

>KOG0600|consensus

Probab=99.42  E-value=3.1e-13  Score=101.74  Aligned_cols=93  Identities=20%  Similarity=0.279  Sum_probs=70.9

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh---CCC---C---C
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT---NKK---P---E   72 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~---~   72 (133)
                      +||.++....|+..+|+||  +||++.||+.|++.| .+.....               ++..|..   .+.   +   .
T Consensus       287 pPELLLG~t~Yg~aVDlWS--~GCIl~El~~gkPI~-~G~tEve---------------Ql~kIfklcGSP~e~~W~~~k  348 (560)
T KOG0600|consen  287 PPELLLGATSYGTAVDLWS--VGCILAELFLGKPIL-QGRTEVE---------------QLHKIFKLCGSPTEDYWPVSK  348 (560)
T ss_pred             ChHHhcCCcccccceeehh--hhHHHHHHHcCCCCc-CCccHHH---------------HHHHHHHHhCCCChhcccccc
Confidence            7999788899999999999  999999999999999 7766544               2222221   100   0   0


Q ss_pred             cc----------------h-hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          73 IK----------------E-KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        73 ~~----------------~-~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ++                + -..++..+.+|+..+|.+||.+|.|+.++|+|+||..
T Consensus       349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t  405 (560)
T KOG0600|consen  349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT  405 (560)
T ss_pred             CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence            00                0 0235678889999999999999999999999999953

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.42  E-value=3.6e-13  Score=95.52  Aligned_cols=107  Identities=25%  Similarity=0.304  Sum_probs=63.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhH---HhhHHHHHHHh-----hhCCCCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLF---ILSCRQALYLI-----ATNKKPE   72 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~   72 (133)
                      +|||.+.....++.++|+|+  +|++++++++|..|| .+.........+....   ....+......     .......
T Consensus       165 ~aPE~~~~~~~~~~~~Dv~s--lG~~l~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (282)
T cd07829         165 RAPEILLGSKHYSTAVDIWS--VGCIFAEMITGKPLF-PGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPP  241 (282)
T ss_pred             CChHHhcCCcCCCccccHHH--HHHHHHHHHhCCCCC-CCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCc
Confidence            57898333337888999999  999999999999999 5443211000000000   00000000000     0000000


Q ss_pred             c---chhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          73 I---KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        73 ~---~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      .   ......+..+.+++.+||..+|.+||++++++.||||
T Consensus       242 ~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         242 KDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             cchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            0   0001236789999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.42  E-value=2.4e-13  Score=101.09  Aligned_cols=93  Identities=17%  Similarity=0.368  Sum_probs=66.1

Q ss_pred             CCCccccCCC----CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcch
Q psy9738           1 MAPEGGHHRK----QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKE   75 (133)
Q Consensus         1 maPE~~~~~~----~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   75 (133)
                      ||||+ +...    .++.++|+||  +|+++|+|++|..|| .+.+...               ....+.... ...++.
T Consensus       210 ~aPE~-l~~~~~~~~~~~~~DiwS--lGvilyell~G~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~~  270 (371)
T cd05622         210 ISPEV-LKSQGGDGYYGRECDWWS--VGVFLYEMLVGDTPF-YADSLVG---------------TYSKIMNHKNSLTFPD  270 (371)
T ss_pred             cCHHH-HhccCCCccCCCccceee--hhHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHcCCCcccCCC
Confidence            68998 5432    3788999999  999999999999999 5443222               222222221 123333


Q ss_pred             hhhhcHHHHHHHHHHhhhcccc--cCCHHHHhcCccccc
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVET--RASASLLLKHPFLKI  112 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~--R~s~~ell~h~~~~~  112 (133)
                      ...++..+++++.+||..++.+  |+++.++++|+||+.
T Consensus       271 ~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~  309 (371)
T cd05622         271 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN  309 (371)
T ss_pred             cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCC
Confidence            3467899999999999843332  789999999999975

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0587|consensus

Probab=99.42  E-value=1.4e-13  Score=108.88  Aligned_cols=96  Identities=38%  Similarity=0.680  Sum_probs=86.0

Q ss_pred             CCCccccCCC----CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchh
Q psy9738           1 MAPEGGHHRK----QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEK   76 (133)
Q Consensus         1 maPE~~~~~~----~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (133)
                      ||||++.+..    .|+..+|+||  +|++..||.-|.+|+ ...++..               .+..|..+++|.+..+
T Consensus       190 MAPEViac~e~~d~tyd~R~D~Ws--LGITaIEladG~PPl-~DmHPmr---------------aLF~IpRNPPPkLkrp  251 (953)
T KOG0587|consen  190 MAPEVIACDESPDATYDYRSDLWS--LGITAIEMAEGAPPL-CDMHPMR---------------ALFLIPRNPPPKLKRP  251 (953)
T ss_pred             ccceeeecccCCCCCcccccchhh--ccceeehhcCCCCCc-cCcchhh---------------hhccCCCCCCccccch
Confidence            8999955443    4667899999  999999999999999 8888888               8888989999999888


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      .+.+..+-+|+..||..|-.+||+..++|+|||+....
T Consensus       252 ~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~  289 (953)
T KOG0587|consen  252 KKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQP  289 (953)
T ss_pred             hhHHHHHHHHHHHHHhhccccCcchhhhccCCcccccc
Confidence            99999999999999999999999999999999999433

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.42  E-value=5.7e-13  Score=94.70  Aligned_cols=107  Identities=17%  Similarity=0.187  Sum_probs=64.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhh---HHhhHHHHHHHhhh--------CC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYL---FILSCRQALYLIAT--------NK   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--------~~   69 (133)
                      +|||++.....++.++|+||  +|++++++++|.+|| ...........+...   .....+........        ..
T Consensus       165 ~aPE~~~~~~~~~~~~Di~s--~G~~l~el~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (283)
T cd07830         165 RAPEILLRSTSYSSPVDIWA--LGCIMAELYTLRPLF-PGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFA  241 (283)
T ss_pred             cCceeeecCcCcCCccchhh--HHHHHHHHHhCCCcc-CCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccc
Confidence            58998345566788999999  999999999999999 543321100000000   00000000000000        00


Q ss_pred             CCCcch-hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          70 KPEIKE-KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        70 ~~~~~~-~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ...+.. ....+..+.+|+.+||+.+|++||++.+++.||||
T Consensus       242 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         242 PTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             cccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            000000 01225789999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0589|consensus

Probab=99.41  E-value=2.7e-13  Score=101.39  Aligned_cols=90  Identities=21%  Similarity=0.260  Sum_probs=75.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      |+||+ +.+..|+.++||||  +||.+|||.+-+++| .+.+...               ....+......++  +...+
T Consensus       173 mcPEi-l~d~pYn~KSDiWs--LGC~~yEm~~lk~aF-~a~~m~~---------------Li~ki~~~~~~Pl--p~~ys  231 (426)
T KOG0589|consen  173 MCPEI-LSDIPYNEKSDIWS--LGCCLYEMCTLKPAF-KASNMSE---------------LILKINRGLYSPL--PSMYS  231 (426)
T ss_pred             cCHHH-hCCCCCCccCcchh--hcchHHHHHhccccc-CccchHH---------------HHHHHhhccCCCC--Ccccc
Confidence            78999 99999999999999  999999999999999 6555444               4455555544444  55678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      .+++.++..||..+|..||++.++|.+|.+.
T Consensus       232 ~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  232 SELRSLVKSMLRKNPEHRPSALELLRRPHLL  262 (426)
T ss_pred             HHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence            9999999999999999999999999998775

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.41  E-value=2.5e-13  Score=110.51  Aligned_cols=93  Identities=19%  Similarity=0.253  Sum_probs=68.0

Q ss_pred             CCCccccC-CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHH-RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~-~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||++.. ...++.++||||  |||++|+|++|..|| .......               .+....... +.++ ....
T Consensus       208 mAPEvL~ge~~~~s~KSDVWS--LG~ILYELLTGk~PF-~~~~~~~---------------qli~~lk~~-p~lp-i~~~  267 (1021)
T PTZ00266        208 WSPELLLHETKSYDDKSDMWA--LGCIIYELCSGKTPF-HKANNFS---------------QLISELKRG-PDLP-IKGK  267 (1021)
T ss_pred             cCHHHHhccCCCCCchhHHHH--HHHHHHHHHHCCCCC-CcCCcHH---------------HHHHHHhcC-CCCC-cCCC
Confidence            68998332 345888999999  999999999999999 5433222               122222211 2221 1235


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      +..+.+||..||..+|..||++.++|.|+|++..
T Consensus       268 S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        268 SKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             CHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence            7889999999999999999999999999999743

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.41  E-value=3.5e-13  Score=94.85  Aligned_cols=84  Identities=14%  Similarity=0.258  Sum_probs=63.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||. +....++.++|+||  +|++++++++ |..|| .+.....               ....+.....+..  +...
T Consensus       165 ~aPE~-~~~~~~~~~~Di~s--lG~~l~el~t~g~~p~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  223 (257)
T cd05116         165 YAPEC-MNYYKFSSKSDVWS--FGVLMWEAFSYGQKPY-KGMKGNE---------------VTQMIESGERMEC--PQRC  223 (257)
T ss_pred             cCHhH-hccCCcCchhHHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHCCCCCCC--CCCC
Confidence            57898 66777888999999  9999999997 99999 4432222               2233333333333  4457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      ++.+.+++.+|++.||+.||+++++.
T Consensus       224 ~~~l~~li~~~~~~~p~~Rp~~~~i~  249 (257)
T cd05116         224 PPEMYDLMKLCWTYGVDERPGFAVVE  249 (257)
T ss_pred             CHHHHHHHHHHhccCchhCcCHHHHH
Confidence            88999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.41  E-value=4.7e-13  Score=96.04  Aligned_cols=95  Identities=19%  Similarity=0.297  Sum_probs=63.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCC----Cc---
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKP----EI---   73 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---   73 (133)
                      ++||.+.....++.++|+|+  +|++++++++|.+|| ...+...           ... .+........+    .+   
T Consensus       184 ~~PE~~~~~~~~~~~~Di~s--lG~~~~el~~g~~~~-~~~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~  248 (302)
T cd07864         184 RPPELLLGEERYGPAIDVWS--CGCILGELFTKKPIF-QANQELA-----------QLE-LISRLCGSPCPAVWPDVIKL  248 (302)
T ss_pred             cChHHhcCCCCCCchhHHHH--HHHHHHHHHhCCCCC-CCCChHH-----------HHH-HHHHHhCCCChhhccccccc
Confidence            57898333445788999999  999999999999999 4332211           000 01111000000    00   


Q ss_pred             -----------------chhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          74 -----------------KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        74 -----------------~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                                       .....++..+.+++.+||..+|++||++.+++.||||
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         249 PYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             ccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence                             0012357889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0192|consensus

Probab=99.40  E-value=5.9e-13  Score=98.71  Aligned_cols=84  Identities=18%  Similarity=0.368  Sum_probs=68.2

Q ss_pred             CCCccccC--CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhh-hCCCCCcchhh
Q psy9738           1 MAPEGGHH--RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIA-TNKKPEIKEKE   77 (133)
Q Consensus         1 maPE~~~~--~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   77 (133)
                      ||||+ +.  ...|+.++|+||  ||+++||+++|..|| .+....+               ....+. ....+.+  +.
T Consensus       211 MAPEv-~~~~~~~~~~K~DvyS--FgIvlWEl~t~~~Pf-~~~~~~~---------------~~~~v~~~~~Rp~~--p~  269 (362)
T KOG0192|consen  211 MAPEV-LRGEKSPYTEKSDVYS--FGIVLWELLTGEIPF-EDLAPVQ---------------VASAVVVGGLRPPI--PK  269 (362)
T ss_pred             cChhh-hcCCCCcCCccchhhh--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHhcCCCCCC--Cc
Confidence            89999 77  568999999999  999999999999999 6655433               344443 3444555  44


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      ..++.+..++..|+..||..||++.+++
T Consensus       270 ~~~~~l~~l~~~CW~~dp~~RP~f~ei~  297 (362)
T KOG0192|consen  270 ECPPHLSSLMERCWLVDPSRRPSFLEIV  297 (362)
T ss_pred             cCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence            5889999999999999999999998874

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.40  E-value=6.5e-13  Score=97.07  Aligned_cols=85  Identities=15%  Similarity=0.240  Sum_probs=63.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC-CCCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN-KKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   78 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++ |..|| .+.....               ........ .....  +..
T Consensus       243 ~aPE~-~~~~~~~~~sDiws--lG~il~el~~~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~--~~~  301 (338)
T cd05102         243 MAPES-IFDKVYTTQSDVWS--FGVLLWEIFSLGASPY-PGVQINE---------------EFCQRLKDGTRMRA--PEN  301 (338)
T ss_pred             cCcHH-hhcCCCCcccCHHH--HHHHHHHHHhCCCCCC-CCCCccH---------------HHHHHHhcCCCCCC--CCC
Confidence            68999 77788999999999  9999999996 99999 5433221               11111111 11222  345


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      .++.+.+++.+||..||..||++.++++
T Consensus       302 ~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         302 ATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            6788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.40  E-value=9.3e-13  Score=94.97  Aligned_cols=106  Identities=18%  Similarity=0.202  Sum_probs=65.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhH--HhhHHHHH----------------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLF--ILSCRQAL----------------   62 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~----------------   62 (133)
                      +|||++.....++.++|+||  +|++++++++|++|| .+..... ....++..  +......+                
T Consensus       182 ~aPE~~~~~~~~~~~~Dv~s--lG~~l~~l~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  257 (316)
T cd07842         182 RAPELLLGARHYTKAIDIWA--IGCIFAELLTLEPIF-KGREAKI-KKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPE  257 (316)
T ss_pred             cCHHHHhCCCCCCcHHHHHH--HHHHHHHHHhcCCCC-cCCcccc-cccchhHHHHHHHHHHHhCCCchhHHHHHhhccc
Confidence            58998334456888999999  999999999999999 5433211 11111110  00000000                


Q ss_pred             --H--HhhhCCCCC---cch--h--hhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          63 --Y--LIATNKKPE---IKE--K--EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        63 --~--~~~~~~~~~---~~~--~--~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                        .  .........   +..  .  ...+..+.+++.+||..||.+|||+.+++.||||
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         258 YDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             chhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence              0  000000000   000  0  1345678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.40  E-value=6.9e-13  Score=91.36  Aligned_cols=91  Identities=29%  Similarity=0.482  Sum_probs=66.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh-h
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK-L   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   79 (133)
                      ++||. .....++.++|+|+  +|++++++++|..|| .......               .................. .
T Consensus       153 ~~pE~-~~~~~~~~~~Di~s--lG~~l~~l~~~~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  213 (244)
T smart00220      153 MAPEV-LLGKGYGKAVDVWS--LGVILYELLTGKPPF-PGDDQLL---------------ELFKKIGKPKPPFPPPEWKI  213 (244)
T ss_pred             CCHHH-HccCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCcHH---------------HHHHHHhccCCCCccccccC
Confidence            47888 66677888999999  999999999999999 4422222               222222222222211111 6


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      +..+.+++.+|+..+|++||++.++++||||
T Consensus       214 ~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      214 SPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             CHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            7889999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.40  E-value=5.6e-13  Score=97.98  Aligned_cols=109  Identities=18%  Similarity=0.200  Sum_probs=66.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccc--------hhh----HHhhHHHHHHHhhhC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLI--------PYL----FILSCRQALYLIATN   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~--------~~~----~~~~~~~~~~~~~~~   68 (133)
                      +|||.+.....++.++|+||  +|++++++++|..|| ...+.......+        +..    .....+.........
T Consensus       184 ~aPE~~~~~~~~~~~~Dvws--lG~il~el~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (345)
T cd07877         184 RAPEIMLNWMHYNQTVDIWS--VGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM  260 (345)
T ss_pred             cCHHHHhCccCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhccc
Confidence            57898333356788999999  999999999999999 543321100000        000    000000000000000


Q ss_pred             CCCCcch-hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          69 KKPEIKE-KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        69 ~~~~~~~-~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ....+.. ....++.+.+|+.+||..||.+|+++.+++.||||+.
T Consensus       261 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~  305 (345)
T cd07877         261 PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  305 (345)
T ss_pred             CCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence            0001100 0124678899999999999999999999999999985

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0594|consensus

Probab=99.40  E-value=4.6e-13  Score=96.75  Aligned_cols=98  Identities=20%  Similarity=0.259  Sum_probs=71.3

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh----C---------
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT----N---------   68 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---------   68 (133)
                      |||+++....|+..+||||  +||+++||+++++.| .+.+...               ++..+..    .         
T Consensus       188 aPEvLlGs~~Ys~~vDiWs--~GcIfaEm~~~~~LF-pG~se~~---------------ql~~If~~lGtP~e~~Wp~v~  249 (323)
T KOG0594|consen  188 APEVLLGSTSYSTSVDIWS--LGCIFAEMFTRRPLF-PGDSEID---------------QLFRIFRLLGTPNEKDWPGVS  249 (323)
T ss_pred             CHHHhcCCCcCCCCcchHh--HHHHHHHHHhCCCCC-CCCcHHH---------------HHHHHHHHcCCCCccCCCCcc
Confidence            7999666778999999999  999999999999999 7766543               2222111    0         


Q ss_pred             --C-----CCCcchh-------hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCC
Q psy9738          69 --K-----KPEIKEK-------EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  117 (133)
Q Consensus        69 --~-----~~~~~~~-------~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~  117 (133)
                        .     .+....+       ....+...+++.+||+++|..|.|+..+|.||||.......
T Consensus       250 ~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~  312 (323)
T KOG0594|consen  250 SLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKS  312 (323)
T ss_pred             ccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccch
Confidence              0     0000000       11235788999999999999999999999999998754433

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.40  E-value=6.3e-13  Score=95.01  Aligned_cols=103  Identities=17%  Similarity=0.287  Sum_probs=62.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhH-----HHHHHHhhhC-------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC-----RQALYLIATN-------   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-------   68 (133)
                      +|||++.....++.++|+||  +|+++++|++|..|| .+.....+.+.    .+...     ..........       
T Consensus       170 ~aPE~~~~~~~~~~~~Dv~s--lG~il~~l~~g~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (291)
T cd07844         170 RPPDVLLGSTEYSTSLDMWG--VGCIFYEMATGRPLF-PGSTDVEDQLH----KIFRVLGTPTEETWPGVSSNPEFKPYS  242 (291)
T ss_pred             CCcHHhhcCcccCcHHHHHH--HHHHHHHHHhCCCCC-CCCccHHHHHH----HHHHhcCCCChhhhhhhhhcccccccc
Confidence            57998334456888999999  999999999999999 43321110000    00000     0000000000       


Q ss_pred             ----CCCCcc-hhhhhc--HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          69 ----KKPEIK-EKEKLS--QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        69 ----~~~~~~-~~~~~~--~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                          ....+. .....+  ..+.+++.+||..+|..||++.+++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         243 FPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             ccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                000000 001123  778899999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.40  E-value=4.9e-13  Score=95.68  Aligned_cols=92  Identities=13%  Similarity=0.238  Sum_probs=67.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      |+||. +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+.....+..  +...
T Consensus       188 ~~pE~-~~~~~~~~~~Dvws--lG~~l~el~~~~~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  246 (288)
T cd05061         188 MAPES-LKDGVFTTSSDMWS--FGVVLWEITSLAEQPY-QGLSNEQ---------------VLKFVMDGGYLDQ--PDNC  246 (288)
T ss_pred             cCHHH-hccCCCChHhHHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            57898 76778899999999  9999999998 77888 4332211               2222222222222  3345


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc------CcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK------HPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~------h~~~~~~  113 (133)
                      +..+.+++.+||..+|++||++.++++      ||+|++.
T Consensus       247 ~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~  286 (288)
T cd05061         247 PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV  286 (288)
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence            788999999999999999999999874      8888764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.40  E-value=2.4e-13  Score=95.41  Aligned_cols=85  Identities=13%  Similarity=0.214  Sum_probs=64.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| ...+...               ....+.......+  +...+
T Consensus       167 ~aPE~-~~~~~~~~~~Dv~s--lG~i~~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  225 (255)
T cd08219         167 VPPEI-WENMPYNNKSDIWS--LGCILYELCTLKHPF-QANSWKN---------------LILKVCQGSYKPL--PSHYS  225 (255)
T ss_pred             cCHHH-HccCCcCchhhhhh--hchhheehhhccCCC-CCCCHHH---------------HHHHHhcCCCCCC--CcccC
Confidence            58998 77778899999999  999999999999999 4433221               2222222222223  34567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+.+++.+||..+|..||++.+++.
T Consensus       226 ~~~~~li~~~l~~~P~~Rp~~~~il~  251 (255)
T cd08219         226 YELRSLIKQMFKRNPRSRPSATTILS  251 (255)
T ss_pred             HHHHHHHHHHHhCCcccCCCHHHHhh
Confidence            88999999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.39  E-value=8.9e-13  Score=96.39  Aligned_cols=109  Identities=21%  Similarity=0.194  Sum_probs=66.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCccc------c-hhhHHhhHH----HHHH-HhhhC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFL------I-PYLFILSCR----QALY-LIATN   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~------~-~~~~~~~~~----~~~~-~~~~~   68 (133)
                      |+||.+.....++.++|+||  +|++++++++|+.|| .+.........      . +........    .... .+...
T Consensus       179 ~aPE~~~~~~~~~~~sDi~s--lG~~l~el~tg~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (337)
T cd07852         179 RAPEILLGSTRYTKGVDMWS--VGCILGEMLLGKPLF-PGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSR  255 (337)
T ss_pred             cCceeeeccccccccchHHH--HHHHHHHHHhCCCCC-CCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccc
Confidence            57998445566788999999  999999999999999 54332110000      0 000000000    0000 00000


Q ss_pred             CCCCcch-hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          69 KKPEIKE-KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        69 ~~~~~~~-~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ....+.. ....+..+.+++.+|++.+|+.||++.++++|+|++.
T Consensus       256 ~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~  300 (337)
T cd07852         256 PRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ  300 (337)
T ss_pred             cccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence            0011100 1225788999999999999999999999999999964

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.39  E-value=6.9e-13  Score=94.17  Aligned_cols=102  Identities=22%  Similarity=0.327  Sum_probs=63.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHH--------HHH----HHhhhC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCR--------QAL----YLIATN   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~~----~~~~~~   68 (133)
                      ++||.+.....++.++|+|+  +|++++++++|..|| ....... .+    ..+....        ...    ......
T Consensus       168 ~~PE~~~~~~~~~~~~Dv~s--lG~~l~el~t~~~p~-~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd07840         168 RPPELLLGATRYGPEVDMWS--VGCILAELFLGKPIF-QGSTELE-QL----EKIFELCGSPTDENWPGVSKLPWFENLK  239 (287)
T ss_pred             CCceeeEccccCChHHHHHH--HHHHHHHHHhCCCCC-CCCChHH-HH----HHHHHHhCCCchhhccccccchhhhhcc
Confidence            58997344456788999999  999999999999999 4433211 00    0000000        000    000000


Q ss_pred             CCCCc----ch-hhh-hcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          69 KKPEI----KE-KEK-LSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        69 ~~~~~----~~-~~~-~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      .....    .. ... .+..+.+++.+||..+|.+||++.+++.||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         240 PKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             ccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence            00000    00 011 27788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.39  E-value=5.9e-13  Score=93.98  Aligned_cols=85  Identities=13%  Similarity=0.213  Sum_probs=63.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||. +....++.++|+||  +|++++++++ |..|| .+.....               ....+.....+..  +...
T Consensus       182 ~~pe~-~~~~~~~~~~Dv~S--lG~il~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  240 (273)
T cd05035         182 IAIES-LADRVYTSKSDVWA--FGVTMWEIATRGQTPY-PGVENHE---------------IYDYLRHGNRLKQ--PEDC  240 (273)
T ss_pred             cCHhh-cccCCCCcccchHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CcCC
Confidence            57888 77778899999999  9999999998 88888 4433222               2222222222333  4456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.+++.
T Consensus       241 ~~~~~~li~~~l~~~p~~Rp~~~e~~~  267 (273)
T cd05035         241 LDELYDLMYSCWRADPKDRPTFTKLRE  267 (273)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.39  E-value=4.7e-13  Score=95.13  Aligned_cols=85  Identities=11%  Similarity=0.218  Sum_probs=63.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+.....+..  +...
T Consensus       188 ~aPE~-~~~~~~~~~~Di~s--lG~~l~el~~~~~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  246 (277)
T cd05062         188 MSPES-LKDGVFTTYSDVWS--FGVVLWEIATLAEQPY-QGMSNEQ---------------VLRFVMEGGLLDK--PDNC  246 (277)
T ss_pred             cChhH-hhcCCcCchhHHHH--HHHHHHHHHcCCCCCC-CCCCHHH---------------HHHHHHcCCcCCC--CCCC
Confidence            68999 77778899999999  9999999998 67888 4433221               2222222222333  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||+.+|++||++.++++
T Consensus       247 ~~~~~~li~~~l~~~p~~Rps~~e~l~  273 (277)
T cd05062         247 PDMLFELMRMCWQYNPKMRPSFLEIIS  273 (277)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.39  E-value=5.9e-13  Score=95.71  Aligned_cols=85  Identities=13%  Similarity=0.180  Sum_probs=63.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      |+||+ .....++.++|+||  +|+++++|++ |..|| .+.....               ....+.....+..  +...
T Consensus       185 ~aPE~-~~~~~~~~~~DvwS--lG~il~el~t~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  243 (297)
T cd05089         185 MAIES-LNYSVYTTKSDVWS--FGVLLWEIVSLGGTPY-CGMTCAE---------------LYEKLPQGYRMEK--PRNC  243 (297)
T ss_pred             cCchh-hccCCCCchhhHHH--HHHHHHHHHcCCCCCC-CCCCHHH---------------HHHHHhcCCCCCC--CCCC
Confidence            58998 77778899999999  9999999997 99999 4433221               2222222222222  3457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+|+.+||..+|.+||+++++++
T Consensus       244 ~~~~~~li~~~l~~~p~~Rp~~~~i~~  270 (297)
T cd05089         244 DDEVYELMRQCWRDRPYERPPFAQISV  270 (297)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.38  E-value=7.6e-13  Score=92.97  Aligned_cols=85  Identities=16%  Similarity=0.258  Sum_probs=63.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| ...+...               ....+.....+..  +...
T Consensus       168 ~aPE~-~~~~~~~~~~Di~s--~G~~l~el~~~g~~p~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  226 (256)
T cd05114         168 SPPEV-FNFSKYSSKSDVWS--FGVLMWEVFTEGKMPF-EKKSNYE---------------VVEMISRGFRLYR--PKLA  226 (256)
T ss_pred             CChhh-cccCccchhhhhHH--HHHHHHHHHcCCCCCC-CCCCHHH---------------HHHHHHCCCCCCC--CCCC
Confidence            58999 77778899999999  9999999999 88999 5433222               2233332222222  3345


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|+..+|.+||++.++++
T Consensus       227 ~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         227 SMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            778899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.38  E-value=5.7e-13  Score=97.29  Aligned_cols=111  Identities=18%  Similarity=0.179  Sum_probs=67.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCc------ccchhh----HHhhHHHHH--HHhhhC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPH------FLIPYL----FILSCRQAL--YLIATN   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~------~~~~~~----~~~~~~~~~--~~~~~~   68 (133)
                      +|||.+.....++.++|+||  +|++++++++|.+|| .+.+.....      +..+..    .+.......  ......
T Consensus       176 ~aPE~~~~~~~~~~~~Di~s--lGv~l~~l~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (332)
T cd07857         176 RAPEIMLSFQSYTKAIDVWS--VGCILAELLGRKPVF-KGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNI  252 (332)
T ss_pred             cCcHHHhCCCCCCcHHHHHH--HHHHHHHHHhCCcCC-CCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhcccc
Confidence            58998334456888999999  999999999999999 543311100      000000    000000000  000001


Q ss_pred             CCCCcch-hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          69 KKPEIKE-KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        69 ~~~~~~~-~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ....+.. ....+..+.+|+.+||+.+|.+||++.+++.|||++...
T Consensus       253 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~  299 (332)
T cd07857         253 PKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH  299 (332)
T ss_pred             CCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence            1111110 123467899999999999999999999999999997543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.38  E-value=7.3e-13  Score=96.86  Aligned_cols=93  Identities=18%  Similarity=0.395  Sum_probs=65.4

Q ss_pred             CCCccccC-----CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcc
Q psy9738           1 MAPEGGHH-----RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIK   74 (133)
Q Consensus         1 maPE~~~~-----~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   74 (133)
                      ||||+ +.     ...++.++|+||  +|+++++|++|..|| .+.+...               ....+.... ...++
T Consensus       170 ~aPE~-~~~~~~~~~~~~~~~DvwS--lGvil~ell~g~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~p  230 (332)
T cd05623         170 ISPEI-LQAMEDGKGKYGPECDWWS--LGVCMYEMLYGETPF-YAESLVE---------------TYGKIMNHKERFQFP  230 (332)
T ss_pred             cCHHH-HhccccCCCCCCCcCCEEe--eHHHHHHHhcCCCCC-CCCCHHH---------------HHHHHhCCCccccCC
Confidence            68998 53     346788999999  999999999999999 5543322               222222221 11121


Q ss_pred             h-hhhhcHHHHHHHHHHhhhcccc--cCCHHHHhcCccccc
Q psy9738          75 E-KEKLSQIFQDFLDQCLEEEVET--RASASLLLKHPFLKI  112 (133)
Q Consensus        75 ~-~~~~~~~~~~ll~~~L~~~p~~--R~s~~ell~h~~~~~  112 (133)
                      . ....+..+++|+.+||..++.+  |+++.++++||||..
T Consensus       231 ~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~  271 (332)
T cd05623         231 AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG  271 (332)
T ss_pred             CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence            1 2346889999999998664443  689999999999975

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.38  E-value=5.7e-13  Score=95.32  Aligned_cols=84  Identities=12%  Similarity=0.250  Sum_probs=63.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++ |..|| .......               ....+........  +...
T Consensus       189 ~aPE~-~~~~~~~~~sDiws--lG~il~~l~t~g~~p~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  247 (288)
T cd05093         189 MPPES-IMYRKFTTESDVWS--LGVVLWEIFTYGKQPW-YQLSNNE---------------VIECITQGRVLQR--PRTC  247 (288)
T ss_pred             cCHHH-hccCCCCchhhHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCcCCC--CCCC
Confidence            58998 77788899999999  9999999998 88888 4433221               2223333322222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +..+.+++.+||..+|.+||++.+++
T Consensus       248 ~~~l~~li~~~l~~~p~~Rpt~~~v~  273 (288)
T cd05093         248 PKEVYDLMLGCWQREPHMRLNIKEIH  273 (288)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHH
Confidence            78899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.38  E-value=1.3e-12  Score=92.19  Aligned_cols=88  Identities=33%  Similarity=0.585  Sum_probs=66.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-CCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (133)
                      +|||. +.+..++.++|+||  +|++++++++|+.|| .......               ....+.. ...+.+  +..+
T Consensus       176 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~--p~~~  234 (264)
T cd06653         176 MSPEV-ISGEGYGRKADVWS--VACTVVEMLTEKPPW-AEYEAMA---------------AIFKIATQPTKPML--PDGV  234 (264)
T ss_pred             cCHhh-hcCCCCCccccHHH--HHHHHHHHHhCCCCC-CccCHHH---------------HHHHHHcCCCCCCC--Cccc
Confidence            57898 66777888999999  999999999999999 4332211               2222221 222333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      +..+.+|+.+|+.. +..||++.+++.|||+
T Consensus       235 ~~~~~~~i~~~l~~-~~~r~~~~~~~~~~~~  264 (264)
T cd06653         235 SDACRDFLKQIFVE-EKRRPTAEFLLRHPFV  264 (264)
T ss_pred             CHHHHHHHHHHhcC-cccCccHHHHhcCCCC
Confidence            88999999999995 7999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.37  E-value=7.6e-13  Score=94.82  Aligned_cols=85  Identities=14%  Similarity=0.266  Sum_probs=63.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||. +.+..++.++|+||  +|+++++|++ |..|| ...+...               ....+.....+..  +...
T Consensus       192 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  250 (291)
T cd05094         192 MPPES-IMYRKFTTESDVWS--FGVILWEIFTYGKQPW-FQLSNTE---------------VIECITQGRVLER--PRVC  250 (291)
T ss_pred             cChHH-hccCCCCchhhHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHhCCCCCCC--CccC
Confidence            68998 77788899999999  9999999998 99998 4433221               2222222222222  3346


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||+.+|.+||++.++++
T Consensus       251 ~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         251 PKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            788999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.37  E-value=7.8e-13  Score=93.32  Aligned_cols=85  Identities=14%  Similarity=0.191  Sum_probs=62.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||. +.+..++.++|+||  +|+++++|++ |..|| .+.....               ....+.....+..  +...
T Consensus       172 ~aPE~-~~~~~~~~~~Dv~s--lG~il~el~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  230 (263)
T cd05052         172 TAPES-LAYNKFSIKSDVWA--FGVLLWEIATYGMSPY-PGIDLSQ---------------VYELLEKGYRMER--PEGC  230 (263)
T ss_pred             CCHHH-hccCCCCchhHHHH--HHHHHHHHHcCCCCCC-CCCCHHH---------------HHHHHHCCCCCCC--CCCC
Confidence            57998 77778889999999  9999999998 88888 4432211               1122222222222  4456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|++||++.++++
T Consensus       231 ~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         231 PPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.37  E-value=9.6e-13  Score=94.12  Aligned_cols=104  Identities=15%  Similarity=0.202  Sum_probs=62.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCccc-------chhhHHhhHHHHHHH-------hh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFL-------IPYLFILSCRQALYL-------IA   66 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-------~~   66 (133)
                      +|||.+.....++.++|+||  +|++++++++|..|| .+.....+.+.       .+....  .. ....       ..
T Consensus       170 ~aPE~~~~~~~~~~~~Dv~s--lG~~l~~l~~g~~~f-~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~  243 (291)
T cd07870         170 RPPDVLLGATDYSSALDIWG--AGCIFIEMLQGQPAF-PGVSDVFEQLEKIWTVLGVPTEDT--WP-GVSKLPNYKPEWF  243 (291)
T ss_pred             cCCceeecCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCchhHHHHHHHHHHHcCCCChhh--hh-hhhhcccccchhc
Confidence            58998333345788899999  999999999999999 43321100000       000000  00 0000       00


Q ss_pred             hCC-CCCcch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          67 TNK-KPEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        67 ~~~-~~~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      ... +..+..   .-..+..+.+++.+|+..||..|||+.+++.||||
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         244 LPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             cccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            000 000000   00125678899999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.37  E-value=1e-12  Score=92.51  Aligned_cols=84  Identities=15%  Similarity=0.244  Sum_probs=62.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||. .....++.++|+||  +|++++++++ |..|| .+.+...               ....+.....+..  +...
T Consensus       170 ~aPE~-~~~~~~~~~~Di~s--lG~~l~~l~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  228 (260)
T cd05070         170 TAPEA-ALYGRFTIKSDVWS--FGILLTELVTKGRVPY-PGMNNRE---------------VLEQVERGYRMPC--PQDC  228 (260)
T ss_pred             cChHH-HhcCCCcchhhhHH--HHHHHHHHHhcCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCcC
Confidence            58998 66777889999999  9999999998 88898 5433222               2222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +..+.+++.+|+..+|++|||+.++.
T Consensus       229 ~~~~~~li~~~l~~~p~~Rpt~~~l~  254 (260)
T cd05070         229 PISLHELMLQCWKKDPEERPTFEYLQ  254 (260)
T ss_pred             CHHHHHHHHHHcccCcccCcCHHHHH
Confidence            78899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG2345|consensus

Probab=99.37  E-value=2.3e-13  Score=94.88  Aligned_cols=87  Identities=20%  Similarity=0.284  Sum_probs=61.9

Q ss_pred             CCccccCCC---CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           2 APEGGHHRK---QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         2 aPE~~~~~~---~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      |||. +.-+   -.+.++||||  +||++|+|+.|..||. .......              -+.....+....++....
T Consensus       206 APEL-f~vk~~~ti~ertDIWS--LGCtLYa~mf~~sPfe-~~~~~Gg--------------SlaLAv~n~q~s~P~~~~  267 (302)
T KOG2345|consen  206 APEL-FNVKSHCTITERTDIWS--LGCTLYAMMFGESPFE-RIYQQGG--------------SLALAVQNAQISIPNSSR  267 (302)
T ss_pred             Cchh-eecccCcccccccchhh--hhHHHHHHHHcCCcch-HHhhcCC--------------eEEEeeeccccccCCCCC
Confidence            7888 6443   4567999999  9999999999999993 1111100              111112233334443455


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      .+..+..+++.||+.||.+||++.+++.
T Consensus       268 yse~l~~lik~mlqvdP~qRP~i~~ll~  295 (302)
T KOG2345|consen  268 YSEALHQLIKSMLQVDPNQRPTIPELLS  295 (302)
T ss_pred             ccHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence            8999999999999999999999999874

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.37  E-value=7.9e-13  Score=94.25  Aligned_cols=85  Identities=13%  Similarity=0.261  Sum_probs=63.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||. +.+..++.++|+||  +|++++++++ |.+|| .......               ....+........  +...
T Consensus       191 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  249 (280)
T cd05092         191 MPPES-ILYRKFTTESDIWS--FGVVLWEIFTYGKQPW-YQLSNTE---------------AIECITQGRELER--PRTC  249 (280)
T ss_pred             cCHHH-hccCCcCchhhHHH--HHHHHHHHHcCCCCCC-ccCCHHH---------------HHHHHHcCccCCC--CCCC
Confidence            57898 77778899999999  9999999997 88888 4433222               2222322222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++.+.+++.+||..||.+||++.+++.
T Consensus       250 ~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         250 PPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            788999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.37  E-value=1e-12  Score=96.51  Aligned_cols=111  Identities=19%  Similarity=0.230  Sum_probs=66.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcc---cchhhHHhhHHHHH-----HHhhhC----
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHF---LIPYLFILSCRQAL-----YLIATN----   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~-----~~~~~~----   68 (133)
                      |+||.+.....++.++|+|+  +|++++++++|..|| .+.+......   .+.......+...+     ......    
T Consensus       182 ~aPE~~~~~~~~~~~~Di~s--lG~ll~~l~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (343)
T cd07880         182 RAPEVILNWMHYTQTVDIWS--VGCIMAEMLTGKPLF-KGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRF  258 (343)
T ss_pred             cCHHHHhCCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhcccc
Confidence            57888333346788999999  999999999999999 5432211000   00000000000000     000000    


Q ss_pred             CCCCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          69 KKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        69 ~~~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ....+. .....++.+.+++.+||..||.+|||+.+++.||||+...
T Consensus       259 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~  305 (343)
T cd07880         259 RKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH  305 (343)
T ss_pred             CcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence            000000 0123567889999999999999999999999999997643

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.37  E-value=6.8e-13  Score=107.05  Aligned_cols=90  Identities=13%  Similarity=0.068  Sum_probs=63.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +||++|||++|.+|+ .....                 ....+.....+..  .....
T Consensus       182 ~APE~-~~~~~~~~~sDVwS--lGviL~ELl~~~~~~-~~~~~-----------------~~~~~~~~~~~~~--~~~~~  238 (793)
T PLN00181        182 TSPEE-DNGSSSNCASDVYR--LGVLLFELFCPVSSR-EEKSR-----------------TMSSLRHRVLPPQ--ILLNW  238 (793)
T ss_pred             EChhh-hccCCCCchhhhhh--HHHHHHHHhhCCCch-hhHHH-----------------HHHHHHHhhcChh--hhhcC
Confidence            69999 77888999999999  999999999988777 32110                 1111111111110  01123


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      +...+++.+||..+|.+||++.++++||||...
T Consensus       239 ~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        239 PKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             HHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence            455688899999999999999999999999753

>KOG0665|consensus

Probab=99.36  E-value=6.4e-13  Score=95.41  Aligned_cols=106  Identities=23%  Similarity=0.254  Sum_probs=66.9

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcc-cchhhH--HhhHHHHHHHhh----hCC-----
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHF-LIPYLF--ILSCRQALYLIA----TNK-----   69 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~----~~~-----   69 (133)
                      |||+ +.+.+|...+||||  +||++.||+.|...| .|.....+-+ .+..+.  ..++..++..+.    .+.     
T Consensus       185 apev-il~~~~ke~vdiwS--vGci~gEli~~~Vlf-~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~  260 (369)
T KOG0665|consen  185 APEV-ILGMGYKENVDIWS--VGCIMGELILGTVLF-PGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQA  260 (369)
T ss_pred             Cchh-eeccCCcccchhhh--hhhHHHHHhhceEEe-cCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhc
Confidence            7999 77777999999999  999999999999999 6654432100 000000  000000111100    000     


Q ss_pred             ------CCC------cchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          70 ------KPE------IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        70 ------~~~------~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                            .++      +..++.....+++++.+||..+|++|.+++++|+|||++
T Consensus       261 ~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  261 ISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             cchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence                  000      000112235678999999999999999999999999997

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.36  E-value=1.9e-12  Score=94.67  Aligned_cols=108  Identities=20%  Similarity=0.300  Sum_probs=68.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhH--------------HHHHHHhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC--------------RQALYLIA   66 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~   66 (133)
                      ++||.+.....++.++|+|+  +|++++++++|..|| .+.....     ....+...              ........
T Consensus       172 ~aPE~~~~~~~~~~~~Dv~s--lG~il~el~tg~~~f-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (328)
T cd07856         172 RAPEIMLTWQKYDVEVDIWS--AGCIFAEMLEGKPLF-PGKDHVN-----QFSIITDLLGTPPDDVINTICSENTLRFVQ  243 (328)
T ss_pred             cCceeeeccCCcCcHHHHHH--HHHHHHHHHhCCCCC-CCCCHHH-----HHHHHHHHhCCCCHHHHHhccchhhHHHHh
Confidence            57998333467889999999  999999999999999 5432211     00000000              00000000


Q ss_pred             -hCCCCCcchh---hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCC
Q psy9738          67 -TNKKPEIKEK---EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  116 (133)
Q Consensus        67 -~~~~~~~~~~---~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~  116 (133)
                       .......+..   ...+..+.+++.+||+.+|++||++++++.|+|+......
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~  297 (328)
T cd07856         244 SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP  297 (328)
T ss_pred             hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence             0000111101   2356889999999999999999999999999999754433

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.36  E-value=1.2e-12  Score=91.95  Aligned_cols=84  Identities=15%  Similarity=0.234  Sum_probs=62.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||. .....++.++|+||  +|++++++++ |..|| ...+...               ....+.......  .+...
T Consensus       165 ~aPE~-~~~~~~~~~~Di~s--lG~~l~~~~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~--~~~~~  223 (257)
T cd05060         165 YAPEC-INYGKFSSKSDVWS--YGVTLWEAFSYGAKPY-GEMKGAE---------------VIAMLESGERLP--RPEEC  223 (257)
T ss_pred             cCHHH-hcCCCCCccchHHH--HHHHHHHHHcCCCCCc-ccCCHHH---------------HHHHHHcCCcCC--CCCCC
Confidence            57998 77778899999999  9999999997 99999 4332211               112222222222  24456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +..+++++.+||..+|.+||++.+++
T Consensus       224 ~~~l~~li~~cl~~~p~~Rp~~~~l~  249 (257)
T cd05060         224 PQEIYSIMLSCWKYRPEDRPTFSELE  249 (257)
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHH
Confidence            78899999999999999999999986

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.36  E-value=1.5e-12  Score=95.21  Aligned_cols=93  Identities=19%  Similarity=0.403  Sum_probs=63.9

Q ss_pred             CCCccccC-----CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcc
Q psy9738           1 MAPEGGHH-----RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIK   74 (133)
Q Consensus         1 maPE~~~~-----~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   74 (133)
                      ||||+ +.     ...++.++|+||  +|+++++|++|..|| .+.+...               ....+.... ...++
T Consensus       170 ~aPE~-~~~~~~~~~~~~~~~Diws--lG~~l~el~~g~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~  230 (331)
T cd05597         170 ISPEI-LQAMEDGKGRYGPECDWWS--LGVCMYEMLYGETPF-YAESLVE---------------TYGKIMNHKEHFQFP  230 (331)
T ss_pred             cCHHH-HhhccccccCCCCcceeeh--hhhHHHHHhhCCCCC-CCCCHHH---------------HHHHHHcCCCcccCC
Confidence            68998 53     245788999999  999999999999999 5443222               222222111 11111


Q ss_pred             -hhhhhcHHHHHHHHHHhhhccc--ccCCHHHHhcCccccc
Q psy9738          75 -EKEKLSQIFQDFLDQCLEEEVE--TRASASLLLKHPFLKI  112 (133)
Q Consensus        75 -~~~~~~~~~~~ll~~~L~~~p~--~R~s~~ell~h~~~~~  112 (133)
                       ....++..+++|+.+||..++.  .|+++.+++.||||..
T Consensus       231 ~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~  271 (331)
T cd05597         231 PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEG  271 (331)
T ss_pred             CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence             1234688999999998865443  3789999999999975

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.35  E-value=1.2e-12  Score=92.45  Aligned_cols=85  Identities=13%  Similarity=0.267  Sum_probs=63.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||. +....++.++|+||  +|++++++++ |..|| ...+...               ....+.....+..  +...
T Consensus       180 ~aPE~-~~~~~~~~~~Dv~s--lG~il~ellt~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  238 (269)
T cd05044         180 MAPES-LLDGKFTTQSDVWS--FGVLMWEILTLGQQPY-PALNNQE---------------VLQHVTAGGRLQK--PENC  238 (269)
T ss_pred             cCHHH-HccCCcccchhHHH--HHHHHHHHHHcCCCCC-cccCHHH---------------HHHHHhcCCccCC--cccc
Confidence            57998 77778899999999  9999999997 99999 4333221               2222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|.+||++.++++
T Consensus       239 ~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         239 PDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             hHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            788999999999999999999999863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.35  E-value=9.7e-13  Score=93.15  Aligned_cols=85  Identities=13%  Similarity=0.314  Sum_probs=63.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||. +.+..++.++|+||  +|+++++++ +|..|| .+.....               ....+........  +...
T Consensus       175 ~aPE~-~~~~~~~~~~Di~s--lG~~l~ell~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  233 (266)
T cd05064         175 AAPEA-IQYHHFSSASDVWS--FGIVMWEVMSYGERPY-WDMSGQD---------------VIKAVEDGFRLPA--PRNC  233 (266)
T ss_pred             cCHHH-HhhCCccchhHHHH--HHHHHHHHhcCCCCCc-CcCCHHH---------------HHHHHHCCCCCCC--CCCC
Confidence            58998 77788999999999  999999976 599999 5433221               2222222222222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|+..+|..||++.++++
T Consensus       234 ~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         234 PNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             CHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence            888999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.35  E-value=1.4e-12  Score=92.98  Aligned_cols=85  Identities=11%  Similarity=0.234  Sum_probs=63.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++ |..|| .+.....               ....+........  +...
T Consensus       193 ~aPE~-~~~~~~~~~~Dv~s--lG~il~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  251 (283)
T cd05090         193 MPPEA-IMYGKFSSDSDIWS--FGVVLWEIFSFGLQPY-YGFSNQE---------------VIEMVRKRQLLPC--SEDC  251 (283)
T ss_pred             cChHH-hccCCCCchhhhHH--HHHHHHHHHcCCCCCC-CCCCHHH---------------HHHHHHcCCcCCC--CCCC
Confidence            57998 66777899999999  9999999998 88898 5433221               2222222222222  4456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|+..+|..||++.++++
T Consensus       252 ~~~~~~li~~cl~~~p~~Rp~~~~i~~  278 (283)
T cd05090         252 PPRMYSLMTECWQEGPSRRPRFKDIHT  278 (283)
T ss_pred             CHHHHHHHHHHcccCcccCcCHHHHHH
Confidence            889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.35  E-value=1.5e-12  Score=90.97  Aligned_cols=86  Identities=16%  Similarity=0.234  Sum_probs=63.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||. +....++.++|+||  +|++++++++ |..|| .......               ....+........  +...
T Consensus       174 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  232 (262)
T cd00192         174 MAPES-LKDGIFTSKSDVWS--FGVLLWEIFTLGATPY-PGLSNEE---------------VLEYLRKGYRLPK--PEYC  232 (262)
T ss_pred             cCHHH-hccCCcchhhccHH--HHHHHHHHHhcCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CccC
Confidence            58998 76678899999999  9999999998 58898 4332211               2222222222222  4456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      +..+.+++.+||..+|..||++.+++.+
T Consensus       233 ~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         233 PDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             ChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            8899999999999999999999998754

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.35  E-value=1.4e-12  Score=92.83  Aligned_cols=85  Identities=11%  Similarity=0.163  Sum_probs=63.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +....++.++|+||  +|+++++|++ |..|| .+.....               ....+........  +...
T Consensus       193 ~aPE~-~~~~~~~~~~Dv~s--lG~~l~el~~~g~~p~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  251 (283)
T cd05091         193 MSPEA-IMYGKFSIDSDIWS--YGVVLWEVFSYGLQPY-CGYSNQD---------------VIEMIRNRQVLPC--PDDC  251 (283)
T ss_pred             cCHHH-HhcCCCCcchhHHH--HHHHHHHHHcCCCCCC-CCCCHHH---------------HHHHHHcCCcCCC--CCCC
Confidence            68998 66777899999999  9999999997 77888 4432221               2223333322222  3457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|++.+|..||++.+++.
T Consensus       252 ~~~~~~li~~cl~~~p~~RP~~~~i~~  278 (283)
T cd05091         252 PAWVYTLMLECWNEFPSRRPRFKDIHS  278 (283)
T ss_pred             CHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            888999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.34  E-value=2.4e-12  Score=94.55  Aligned_cols=85  Identities=16%  Similarity=0.218  Sum_probs=63.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   78 (133)
                      ||||+ +.+..++.++|+||  +||+++++++ |..|| .+.....               ......... ....  +..
T Consensus       242 ~aPE~-~~~~~~~~~~Di~S--lGv~l~el~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~--~~~  300 (337)
T cd05054         242 MAPES-IFDKVYTTQSDVWS--FGVLLWEIFSLGASPY-PGVQIDE---------------EFCRRLKEGTRMRA--PEY  300 (337)
T ss_pred             cCcHH-hcCCCCCccccHHH--HHHHHHHHHHcCCCCC-CCCCccH---------------HHHHHHhccCCCCC--Ccc
Confidence            68999 77788999999999  9999999997 99999 5432222               121222111 1111  344


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      .++.+.+++.+||+.+|+.||++.++++
T Consensus       301 ~~~~~~~l~~~cl~~~p~~RPs~~ell~  328 (337)
T cd05054         301 ATPEIYSIMLDCWHNNPEDRPTFSELVE  328 (337)
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            6788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0696|consensus

Probab=99.34  E-value=1.2e-12  Score=97.27  Aligned_cols=90  Identities=20%  Similarity=0.332  Sum_probs=72.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|.|+  +|+++|||+.|++|| .+++..+               .. ..+.+.....  |..++
T Consensus       517 iAPEI-i~YqPYgksvDWWa--~GVLLyEmlaGQpPF-dGeDE~e---------------lF-~aI~ehnvsy--PKslS  574 (683)
T KOG0696|consen  517 IAPEI-IAYQPYGKSVDWWA--FGVLLYEMLAGQPPF-DGEDEDE---------------LF-QAIMEHNVSY--PKSLS  574 (683)
T ss_pred             cccce-EEecccccchhHHH--HHHHHHHHHcCCCCC-CCCCHHH---------------HH-HHHHHccCcC--ccccc
Confidence            69999 99999999999999  999999999999999 6665443               22 2233333333  56789


Q ss_pred             HHHHHHHHHHhhhcccccCCH-----HHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA-----SLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~-----~ell~h~~~~~  112 (133)
                      .++.++....|...|.+|..+     .++-.||||+.
T Consensus       575 kEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~  611 (683)
T KOG0696|consen  575 KEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRR  611 (683)
T ss_pred             HHHHHHHHHHhhcCCccccCCCCccccchhhCcchhh
Confidence            999999999999999999754     45889999974

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.34  E-value=1.7e-12  Score=91.37  Aligned_cols=84  Identities=15%  Similarity=0.248  Sum_probs=61.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||. +....++.++|+||  +|++++++++ |..|| .+.....               ....+........  ....
T Consensus       171 ~aPE~-~~~~~~~~~~Di~s--lG~~l~~l~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  229 (261)
T cd05072         171 TAPEA-INFGSFTIKSDVWS--FGILLYEIVTYGKIPY-PGMSNSD---------------VMSALQRGYRMPR--MENC  229 (261)
T ss_pred             CCHHH-hccCCCChhhhhhh--hHHHHHHHHccCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            58998 77778888999999  9999999998 89999 4432211               1222221211111  2356


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +..+.+++.+|+..+|++||+++++.
T Consensus       230 ~~~~~~li~~~l~~~p~~Rp~~~~i~  255 (261)
T cd05072         230 PDELYDIMKTCWKEKAEERPTFDYLQ  255 (261)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHH
Confidence            78899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.33  E-value=1.6e-12  Score=92.95  Aligned_cols=85  Identities=16%  Similarity=0.263  Sum_probs=62.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+.....+..  +...
T Consensus       201 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  259 (293)
T cd05053         201 MAPEA-LFDRVYTHQSDVWS--FGVLLWEIFTLGGSPY-PGIPVEE---------------LFKLLKEGYRMEK--PQNC  259 (293)
T ss_pred             cCHHH-hccCCcCcccceee--hhhHHHHHhcCCCCCC-CCCCHHH---------------HHHHHHcCCcCCC--CCCC
Confidence            58998 77778899999999  9999999997 88888 4332211               1222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+|+.+|+..+|..|||+.++++
T Consensus       260 ~~~~~~li~~~l~~~p~~Rps~~eil~  286 (293)
T cd05053         260 TQELYHLMRDCWHEVPSQRPTFKQLVE  286 (293)
T ss_pred             CHHHHHHHHHHcccCcccCcCHHHHHH
Confidence            788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0670|consensus

Probab=99.33  E-value=4.4e-13  Score=101.68  Aligned_cols=106  Identities=24%  Similarity=0.294  Sum_probs=67.8

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCC------------------------Cccc----chhh
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLR------------------------PHFL----IPYL   53 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~------------------------~~~~----~~~~   53 (133)
                      |||+ +.+..|+...|+||  +||.+||+.+|...| +|....+                        ++|.    +-+.
T Consensus       603 aPEI-iLG~~yd~~iD~WS--vgctLYElYtGkIlF-pG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~  678 (752)
T KOG0670|consen  603 APEI-ILGLPYDYPIDTWS--VGCTLYELYTGKILF-PGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYI  678 (752)
T ss_pred             Ccce-eecCcccCCcccee--eceeeEEeeccceec-CCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEE
Confidence            7999 88999999999999  999999999999999 6543211                        0000    0000


Q ss_pred             --HHhhHHH------------HHHHhhhCCCCCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          54 --FILSCRQ------------ALYLIATNKKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        54 --~~~~~~~------------~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                        .-++.+.            .+...... .+.++ +....-..+++||.+||.+||++|.++.++|.||||..
T Consensus       679 e~D~vT~r~~~~vm~~vkPtkdl~s~l~~-~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  679 EVDKVTEREKRTVMVNVKPTKDLGSELIA-VQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             eccccccceeEEEecccCcchhHHHHHhc-cCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence              0000000            00000000 00010 11334467889999999999999999999999999974

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.33  E-value=1.9e-12  Score=90.65  Aligned_cols=85  Identities=16%  Similarity=0.228  Sum_probs=61.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||. +.+..++.++|+||  +|++++++++ |..|| .......               ....+........  +...
T Consensus       163 ~aPE~-~~~~~~~~~~Dv~s--lG~il~e~~~~~~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  221 (252)
T cd05084         163 TAPEA-LNYGRYSSESDVWS--FGILLWEAFSLGAVPY-ANLSNQQ---------------TREAIEQGVRLPC--PELC  221 (252)
T ss_pred             cCchh-hcCCCCChHHHHHH--HHHHHHHHHhCCCCCc-cccCHHH---------------HHHHHHcCCCCCC--cccC
Confidence            57998 77778889999999  9999999997 88888 3322111               1122222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|++||++.++++
T Consensus       222 ~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         222 PDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            788999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.33  E-value=2.6e-12  Score=90.49  Aligned_cols=85  Identities=13%  Similarity=0.216  Sum_probs=62.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||+ +....++.++|+||  +|++++++++ |..|| .+.+...               ....+........  +...
T Consensus       170 ~~pe~-~~~~~~~~~~Di~s--lG~~l~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  228 (260)
T cd05067         170 TAPEA-INYGTFTIKSDVWS--FGILLTEIVTYGRIPY-PGMTNPE---------------VIQNLERGYRMPR--PDNC  228 (260)
T ss_pred             cCHHH-hccCCcCcccchHH--HHHHHHHHHhCCCCCC-CCCChHH---------------HHHHHHcCCCCCC--CCCC
Confidence            57888 76777888999999  9999999998 99999 5433221               2222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|+.||++++++.
T Consensus       229 ~~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         229 PEELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            788999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0584|consensus

Probab=99.33  E-value=1.2e-12  Score=100.53  Aligned_cols=92  Identities=26%  Similarity=0.382  Sum_probs=71.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ + ...|+..+|||+  ||+-++||+++..|| .....-.               ++|+.+..+..+-.-...-.
T Consensus       211 MAPEm-Y-EE~YnE~VDVYa--FGMCmLEMvT~eYPY-sEC~n~A---------------QIYKKV~SGiKP~sl~kV~d  270 (632)
T KOG0584|consen  211 MAPEM-Y-EENYNELVDVYA--FGMCMLEMVTSEYPY-SECTNPA---------------QIYKKVTSGIKPAALSKVKD  270 (632)
T ss_pred             cChHH-H-hhhcchhhhhhh--hhHHHHHHHhccCCh-hhhCCHH---------------HHHHHHHcCCCHHHhhccCC
Confidence            89999 5 489999999999  999999999999999 3222212               56655544432211123347


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ++.++||.+||.. .+.|+|+.|||.|+||...
T Consensus       271 Pevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  271 PEVREFIEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             HHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence            8999999999999 9999999999999999864

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.33  E-value=3e-12  Score=89.49  Aligned_cols=85  Identities=15%  Similarity=0.200  Sum_probs=62.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||. +.+..++.++|+||  +|++++++++ |..|| .......               ....+........  +...
T Consensus       162 ~~PE~-~~~~~~~~~~Di~s--lG~i~~~l~t~~~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  220 (251)
T cd05041         162 TAPEA-LNYGRYTSESDVWS--YGILLWETFSLGDTPY-PGMSNQQ---------------TRERIESGYRMPA--PQLC  220 (251)
T ss_pred             CChHh-hccCCCCcchhHHH--HHHHHHHHHhccCCCC-ccCCHHH---------------HHHHHhcCCCCCC--CccC
Confidence            47898 67778899999999  9999999998 78888 4332211               1122221111222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|.+||++.++++
T Consensus       221 ~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         221 PEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.32  E-value=1.9e-12  Score=91.75  Aligned_cols=85  Identities=14%  Similarity=0.255  Sum_probs=63.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||. +....++.++|+|+  +|++++++++ |..|| .+.....               ....+.....+..  +...
T Consensus       188 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  246 (277)
T cd05032         188 MAPES-LKDGVFTTKSDVWS--FGVVLWEMATLAEQPY-QGLSNEE---------------VLKFVIDGGHLDL--PENC  246 (277)
T ss_pred             cCHHH-HhcCCCCcccchHH--HHHHHHHhhccCCCCC-ccCCHHH---------------HHHHHhcCCCCCC--CCCC
Confidence            57998 66777889999999  9999999997 88898 4433222               2222222222333  4456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||+.+|+.|||+.+++.
T Consensus       247 ~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         247 PDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.32  E-value=1.7e-12  Score=91.40  Aligned_cols=86  Identities=15%  Similarity=0.180  Sum_probs=62.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||. ..+..++.++|+||  +|+++++|++ |..|| ...+...               ....+........  +...
T Consensus       168 ~~pe~-~~~~~~~~~~Di~s--lG~~l~~l~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  226 (256)
T cd05113         168 SPPEV-LLYSKFSSKSDVWA--FGVLMWEVYSLGKMPY-ERFNNSE---------------TVEKVSQGLRLYR--PHLA  226 (256)
T ss_pred             CCHHH-HhcCcccchhHHHH--HHHHHHHHhcCCCCCc-CcCCHHH---------------HHHHHhcCCCCCC--CCCC
Confidence            47888 66677889999999  9999999998 98998 4332211               2222222222222  3345


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      +..+++++.+||..+|.+||++.+++.+
T Consensus       227 ~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         227 SEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence            7889999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.32  E-value=2.3e-12  Score=90.57  Aligned_cols=85  Identities=18%  Similarity=0.248  Sum_probs=63.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +....++.++|+|+  +|++++++++ |..|| .......               ....+.....+..  +...
T Consensus       166 ~aPE~-~~~~~~~~~~Dv~s--lG~i~~~l~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  224 (256)
T cd05082         166 TAPEA-LREKKFSTKSDVWS--FGILLWEIYSFGRVPY-PRIPLKD---------------VVPRVEKGYKMDA--PDGC  224 (256)
T ss_pred             cCHHH-HccCCCCchhhhHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHhcCCCCCC--CCCC
Confidence            68998 77778899999999  9999999997 89998 4322111               1222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++.+.+++.+|+..+|++||++.++++
T Consensus       225 ~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         225 PPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.32  E-value=4.1e-12  Score=89.48  Aligned_cols=84  Identities=14%  Similarity=0.230  Sum_probs=62.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||. ..+..++.++|+||  +|++++++++ |+.|| .+.....               ....+........  +...
T Consensus       171 ~aPE~-~~~~~~~~~~Di~s--lG~~l~el~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  229 (261)
T cd05068         171 TAPEA-ALYNRFSIKSDVWS--FGILLTEIVTYGRMPY-PGMTNAE---------------VLQQVDQGYRMPC--PPGC  229 (261)
T ss_pred             cCccc-cccCCCCchhhHHH--HHHHHHHHHhcCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCcC
Confidence            58998 77778899999999  9999999998 99999 4433221               2222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +..+.+++.+|+..+|.+||++.++.
T Consensus       230 ~~~~~~li~~~l~~~P~~Rp~~~~l~  255 (261)
T cd05068         230 PKELYDIMLDCWKEDPDDRPTFETLQ  255 (261)
T ss_pred             CHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            78899999999999999999999986

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.32  E-value=2.4e-12  Score=90.68  Aligned_cols=85  Identities=11%  Similarity=0.219  Sum_probs=62.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||. ..+..++.++|+||  +|++++++++ |..|| .+.....               ....+.....+..  +...
T Consensus       170 ~~Pe~-~~~~~~~~~~Di~s--lG~~l~el~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  228 (260)
T cd05069         170 TAPEA-ALYGRFTIKSDVWS--FGILLTELVTKGRVPY-PGMVNRE---------------VLEQVERGYRMPC--PQGC  228 (260)
T ss_pred             CCHHH-hccCCcChHHHHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--Cccc
Confidence            57888 66777888999999  9999999998 88999 5433221               2222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|.+||++.++++
T Consensus       229 ~~~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         229 PESLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            788999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG0668|consensus

Probab=99.32  E-value=2.3e-12  Score=89.45  Aligned_cols=109  Identities=17%  Similarity=0.198  Sum_probs=71.1

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchh-hHHhhHHHHHHHhhhCCCCCcc------
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPY-LFILSCRQALYLIATNKKPEIK------   74 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------   74 (133)
                      -||.++....|+.+.|+||  +||.+..|+..+.||.+|.+...+..-|.. +...++.+.+........+.+.      
T Consensus       200 GPELLVdy~~YDYSLD~WS--~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~  277 (338)
T KOG0668|consen  200 GPELLVDYQMYDYSLDMWS--LGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRH  277 (338)
T ss_pred             CchheeechhccccHHHHH--HHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhcc
Confidence            4888778889999999999  999999999999998444332221111111 1122222222111111111110      


Q ss_pred             ------------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          75 ------------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        75 ------------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                                  ...-.++++.||+.++|.+|...|+|+.|+|.||||..
T Consensus       278 ~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~  327 (338)
T KOG0668|consen  278 SRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP  327 (338)
T ss_pred             ccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence                        01224689999999999999999999999999999964

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.32  E-value=2e-12  Score=91.43  Aligned_cols=85  Identities=12%  Similarity=0.140  Sum_probs=61.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||. .....++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       181 ~~pe~-~~~~~~~~~~Di~s--lG~il~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  239 (272)
T cd05075         181 IAIES-LADRVYTTKSDVWS--FGVTMWEIATRGQTPY-PGVENSE---------------IYDYLRQGNRLKQ--PPDC  239 (272)
T ss_pred             CCHHH-ccCCCcChHHHHHH--HHHHHHHHHcCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            46787 66777889999999  9999999998 78888 4432211               1112222221222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|++||++.++++
T Consensus       240 ~~~~~~li~~~l~~~p~~Rps~~~l~~  266 (272)
T cd05075         240 LDGLYSLMSSCWLLNPKDRPSFETLRC  266 (272)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.32  E-value=2.8e-12  Score=90.16  Aligned_cols=85  Identities=13%  Similarity=0.174  Sum_probs=63.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||. +.+..++.++|+||  +|++++++++ |..|| .......               ....+........  +...
T Consensus       168 ~~Pe~-~~~~~~~~~~Di~s--lG~il~~l~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  226 (256)
T cd05059         168 APPEV-FDYSRFSSKSDVWS--FGVLMWEVFSEGKMPY-ERFSNSE---------------VVESVSAGYRLYR--PKLA  226 (256)
T ss_pred             cCHHH-hccCCCCchhhHHH--HHHHHHHHhccCCCCC-CCCCHHH---------------HHHHHHcCCcCCC--CCCC
Confidence            57898 77778899999999  9999999998 78888 4332221               2222222212222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|++||++.+++.
T Consensus       227 ~~~~~~li~~cl~~~p~~Rpt~~~~l~  253 (256)
T cd05059         227 PTEVYTIMYSCWHEKPEDRPAFKKLLS  253 (256)
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.32  E-value=2.8e-12  Score=95.41  Aligned_cols=86  Identities=14%  Similarity=0.202  Sum_probs=63.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +....++.++|+||  +|+++++|++ |..|| .......               ......... .....+...
T Consensus       281 ~aPE~-~~~~~~~~~~DvwS--lGvil~ellt~G~~Pf-~~~~~~~---------------~~~~~~~~~-~~~~~~~~~  340 (374)
T cd05106         281 MAPES-IFDCVYTVQSDVWS--YGILLWEIFSLGKSPY-PGILVNS---------------KFYKMVKRG-YQMSRPDFA  340 (374)
T ss_pred             eCHHH-hcCCCCCccccHHH--HHHHHHHHHhCCCCCC-ccccccH---------------HHHHHHHcc-cCccCCCCC
Confidence            68999 77778999999999  9999999997 99999 5432222               122222221 111113446


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++++.+++.+||+.||.+||++.++++
T Consensus       341 ~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         341 PPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.32  E-value=2.4e-12  Score=90.52  Aligned_cols=85  Identities=14%  Similarity=0.238  Sum_probs=60.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhC-CCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEG-EPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||. +....++.++|+||  +|++++++++| .+|| ...+...               ....+.....+..  +...
T Consensus       169 ~aPE~-~~~~~~~~~~Di~s--lG~~l~el~~~~~~~~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  227 (262)
T cd05058         169 MALES-LQTQKFTTKSDVWS--FGVLLWELMTRGAPPY-PDVDSFD---------------ITVYLLQGRRLLQ--PEYC  227 (262)
T ss_pred             cChhH-hccCccchHHHHHH--HHHHHHHHHcCCCCCC-CCCCHHH---------------HHHHHhcCCCCCC--CCcC
Confidence            58898 76778889999999  99999999985 5566 3322111               1112222222222  3446


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|++||++.+++.
T Consensus       228 ~~~~~~li~~cl~~~p~~Rp~~~~il~  254 (262)
T cd05058         228 PDPLYEVMLSCWHPKPEMRPTFSELVS  254 (262)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.31  E-value=3e-12  Score=90.43  Aligned_cols=85  Identities=12%  Similarity=0.308  Sum_probs=62.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||. +.+..++.++|+|+  +|++++++++ |..|| .......               ....+........  +...
T Consensus       175 ~~Pe~-~~~~~~~~~~Dv~s--lG~~l~~l~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  233 (266)
T cd05033         175 TAPEA-IAYRKFTSASDVWS--FGIVMWEVMSYGERPY-WDMSNQD---------------VIKAVEDGYRLPP--PMDC  233 (266)
T ss_pred             cChhh-hccCCCccccchHH--HHHHHHHHHccCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            57898 77778899999999  9999999987 98888 4322111               2222222222121  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|++.+|+.||++.++++
T Consensus       234 ~~~l~~li~~cl~~~p~~Rp~~~ei~~  260 (266)
T cd05033         234 PSALYQLMLDCWQKDRNERPTFSQIVS  260 (266)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.31  E-value=2.8e-12  Score=90.13  Aligned_cols=85  Identities=20%  Similarity=0.251  Sum_probs=62.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||. .....++.++|+|+  +|++++++++ |..|| .+.+...               ....+.....+..  +...
T Consensus       171 ~~PE~-~~~~~~~~~~Diws--lG~~l~~l~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  229 (261)
T cd05148         171 TAPEA-ASHGTFSTKSDVWS--FGILLYEMFTYGQVPY-PGMNNHE---------------VYDQITAGYRMPC--PAKC  229 (261)
T ss_pred             cCHHH-HccCCCCchhhHHH--HHHHHHHHHcCCCCCC-CcCCHHH---------------HHHHHHhCCcCCC--CCCC
Confidence            47888 66778888999999  9999999998 88999 4433221               2222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|.+|||+.++++
T Consensus       230 ~~~~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         230 PQEIYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             CHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            788999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.31  E-value=2.5e-12  Score=91.45  Aligned_cols=84  Identities=17%  Similarity=0.252  Sum_probs=62.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +....++.++|+||  +|++++++++ |..|| ...+...               ....+.....+..  +...
T Consensus       186 ~apE~-~~~~~~~~~~Di~s--lG~~l~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  244 (280)
T cd05043         186 MALES-LVNKEYSSASDVWS--FGVLLWELMTLGQTPY-VEIDPFE---------------MAAYLKDGYRLAQ--PINC  244 (280)
T ss_pred             cCHHH-HhcCCCCchhhHHH--hHHHHHHHhcCCCCCc-CcCCHHH---------------HHHHHHcCCCCCC--CCcC
Confidence            58998 66777899999999  9999999998 99999 4433221               1111111212222  3446


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +..+.+++.+|+..+|+.||++.+++
T Consensus       245 ~~~~~~li~~~l~~~p~~Rps~~~~~  270 (280)
T cd05043         245 PDELFAVMACCWALDPEERPSFSQLV  270 (280)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHH
Confidence            78899999999999999999999986

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.31  E-value=4.8e-12  Score=90.39  Aligned_cols=96  Identities=21%  Similarity=0.350  Sum_probs=65.6

Q ss_pred             CCCccccCCCC--CCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHRKQ--YGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~--~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      ++||. +.+..  ++.++|+|+  +|+++++|++|..|| ........           .......+.. ..+..  +..
T Consensus       173 ~aPE~-~~~~~~~~~~~~Dv~s--lG~il~el~tg~~p~-~~~~~~~~-----------~~~~~~~~~~-~~~~~--~~~  234 (288)
T cd05583         173 MAPEV-IRGGSGGHDKAVDWWS--LGVLTFELLTGASPF-TVDGEQNS-----------QSEISRRILK-SKPPF--PKT  234 (288)
T ss_pred             cCHHH-hcCCCCCCcchhhhHH--HHHHHHHHHhCCCCc-ccCcccch-----------HHHHHHHHHc-cCCCC--Ccc
Confidence            47887 54433  677899999  999999999999999 43222110           0001111111 11222  345


Q ss_pred             hcHHHHHHHHHHhhhcccccCC---HHHHhcCcccccCC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRAS---ASLLLKHPFLKIAR  114 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s---~~ell~h~~~~~~~  114 (133)
                      ++..+.+++.+||+.+|+.|||   +.++|.||||+...
T Consensus       235 ~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~  273 (288)
T cd05583         235 MSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID  273 (288)
T ss_pred             cCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence            6788999999999999999998   46679999997653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.31  E-value=2.3e-12  Score=93.03  Aligned_cols=86  Identities=16%  Similarity=0.196  Sum_probs=62.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||. +.+..++.++|+||  +|++++++++ |..|| .+.+...               .............  +...
T Consensus       190 ~aPE~-~~~~~~~~~~Di~s--lG~il~ellt~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  248 (303)
T cd05088         190 MAIES-LNYSVYTTNSDVWS--YGVLLWEIVSLGGTPY-CGMTCAE---------------LYEKLPQGYRLEK--PLNC  248 (303)
T ss_pred             cCHHH-HhccCCcccccchh--hhhHHHHHHhcCCCCc-ccCChHH---------------HHHHHhcCCcCCC--CCCC
Confidence            57888 67777889999999  9999999997 99999 5433221               1111111111112  3345


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      +..+.+++.+||..+|+.||++++++.+
T Consensus       249 ~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         249 DDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            7889999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.31  E-value=2.6e-12  Score=90.11  Aligned_cols=85  Identities=22%  Similarity=0.304  Sum_probs=62.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||. +.++.++.++|+||  +|++++++++ |..|| .......               ....+........  +...
T Consensus       168 ~aPe~-~~~~~~~~~~Dv~s--lG~~l~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  226 (256)
T cd05112         168 SSPEV-FSFSKYSSKSDVWS--FGVLMWEVFSEGKTPY-ENRSNSE---------------VVETINAGFRLYK--PRLA  226 (256)
T ss_pred             cCHhH-hccCCcChHHHHHH--HHHHHHHHHcCCCCCC-CcCCHHH---------------HHHHHhCCCCCCC--CCCC
Confidence            57998 77778889999999  9999999997 89999 4322111               2222222111111  3346


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|..||++.++++
T Consensus       227 ~~~~~~l~~~~l~~~p~~Rp~~~~~l~  253 (256)
T cd05112         227 SQSVYELMQHCWKERPEDRPSFSLLLH  253 (256)
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.31  E-value=5.1e-12  Score=89.09  Aligned_cols=88  Identities=16%  Similarity=0.302  Sum_probs=63.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||. +.+..++.++|+||  +|++++++++|..|| .......             ......+.....+... ....+
T Consensus       173 ~aPE~-~~~~~~~~~~Di~s--lG~~l~el~~g~~p~-~~~~~~~-------------~~~~~~~~~~~~~~~~-~~~~~  234 (267)
T cd08228         173 MSPER-IHENGYNFKSDIWS--LGCLLYEMAALQSPF-YGDKMNL-------------FSLCQKIEQCDYPPLP-TEHYS  234 (267)
T ss_pred             cChhh-hccCCCCchhhHHH--HHHHHHHHhcCCCCC-ccccccH-------------HHHHHHHhcCCCCCCC-hhhcC
Confidence            58998 77777888999999  999999999999999 4432211             0012222222222221 23567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+.+++.+||..+|++||++.++++
T Consensus       235 ~~~~~li~~cl~~~p~~Rp~~~~vl~  260 (267)
T cd08228         235 EKLRELVSMCIYPDPDQRPDIGYVHQ  260 (267)
T ss_pred             HHHHHHHHHHCCCCcccCcCHHHHHH
Confidence            88999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.31  E-value=4.7e-12  Score=89.60  Aligned_cols=85  Identities=12%  Similarity=0.217  Sum_probs=63.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||. +....++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       175 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~~~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  233 (270)
T cd05056         175 MAPES-INFRRFTSASDVWM--FGVCMWEILMLGVKPF-QGVKNND---------------VIGRIENGERLPM--PPNC  233 (270)
T ss_pred             cChhh-hccCCCCchhhhHH--HHHHHHHHHHcCCCCC-CCCCHHH---------------HHHHHHcCCcCCC--CCCC
Confidence            58998 77778899999999  9999999885 99999 4433222               2222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|+..+|+.||++.+++.
T Consensus       234 ~~~~~~li~~~l~~~P~~Rpt~~~~~~  260 (270)
T cd05056         234 PPTLYSLMTKCWAYDPSKRPRFTELKA  260 (270)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            789999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.31  E-value=3e-12  Score=90.41  Aligned_cols=85  Identities=13%  Similarity=0.286  Sum_probs=62.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||+ +....++.++|+||  +|++++++++ |..|| ...+...               ....+........  +...
T Consensus       177 ~~PE~-~~~~~~~~~~Dv~s--lG~il~ell~~g~~p~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  235 (268)
T cd05063         177 TAPEA-IAYRKFTSASDVWS--FGIVMWEVMSFGERPY-WDMSNHE---------------VMKAINDGFRLPA--PMDC  235 (268)
T ss_pred             cCHHH-hhcCCcChHhHHHH--HHHHHHHHHhCCCCCC-CcCCHHH---------------HHHHHhcCCCCCC--CCCC
Confidence            57888 76778889999999  9999999987 99999 5433222               2222222221111  3346


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|+..+|+.||++.++++
T Consensus       236 ~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         236 PSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            788899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.31  E-value=4e-12  Score=89.84  Aligned_cols=85  Identities=16%  Similarity=0.221  Sum_probs=62.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      |+||+ .....++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       170 ~~PE~-~~~~~~~~~~Dvws--lG~~l~ellt~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  228 (262)
T cd05071         170 TAPEA-ALYGRFTIKSDVWS--FGILLTELTTKGRVPY-PGMVNRE---------------VLDQVERGYRMPC--PPEC  228 (262)
T ss_pred             cCHhH-hccCCCCchhhHHH--HHHHHHHHHcCCCCCC-CCCChHH---------------HHHHHhcCCCCCC--cccc
Confidence            57898 77778899999999  9999999999 88888 4332221               2222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|++.+|++||++.++++
T Consensus       229 ~~~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         229 PESLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            788999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.31  E-value=2.7e-12  Score=91.72  Aligned_cols=84  Identities=12%  Similarity=0.257  Sum_probs=61.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||. +.+..++.++|+||  +|+++++|++ |..|| .+.....               ....+........  +...
T Consensus       199 ~aPE~-~~~~~~~~~~Dv~s--lG~il~el~~~~~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  257 (288)
T cd05050         199 MPPES-IFYNRYTTESDVWA--YGVVLWEIFSYGMQPY-YGMAHEE---------------VIYYVRDGNVLSC--PDNC  257 (288)
T ss_pred             cCHHH-HhcCCCCchhHHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHhcCCCCCC--CCCC
Confidence            57888 77778999999999  9999999997 77788 4433221               2222222222222  3346


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +..+.+|+.+||+.+|++||++.|++
T Consensus       258 ~~~l~~li~~~l~~~p~~Rpt~~el~  283 (288)
T cd05050         258 PLELYNLMRLCWSKLPSDRPSFASIN  283 (288)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHH
Confidence            78899999999999999999999986

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.30  E-value=8.3e-12  Score=89.24  Aligned_cols=96  Identities=17%  Similarity=0.316  Sum_probs=67.5

Q ss_pred             CCCccccCC--CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHR--KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~--~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      ++||. +..  ..++.++|+|+  +|++++++++|..|| ........           .. ..........+..  +..
T Consensus       173 ~aPE~-~~~~~~~~~~~~Dv~s--lG~~l~~ll~g~~p~-~~~~~~~~-----------~~-~~~~~~~~~~~~~--~~~  234 (290)
T cd05613         173 MAPDI-VRGGDGGHDKAVDWWS--MGVLMYELLTGASPF-TVDGEKNS-----------QA-EISRRILKSEPPY--PQE  234 (290)
T ss_pred             CChhh-ccCCCCCCCccccHHH--HHHHHHHHhcCCCCC-CcCCcccc-----------HH-HHHHHhhccCCCC--Ccc
Confidence            57888 433  34678899999  999999999999999 43222110           00 1111111122222  345


Q ss_pred             hcHHHHHHHHHHhhhcccccC-----CHHHHhcCcccccCC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIAR  114 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~~~  114 (133)
                      .++.+.+++.+||..+|+.|+     ++.+++.||||+...
T Consensus       235 ~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         235 MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence            788899999999999999997     889999999998654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.30  E-value=3.6e-12  Score=89.05  Aligned_cols=85  Identities=16%  Similarity=0.200  Sum_probs=62.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +....++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       161 ~aPE~-~~~~~~~~~~Di~s--lG~ll~~~~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  219 (250)
T cd05085         161 TAPEA-LNYGRYSSESDVWS--YGILLWETFSLGVCPY-PGMTNQQ---------------AREQVEKGYRMSC--PQKC  219 (250)
T ss_pred             cCHHH-hccCCCCchhHHHH--HHHHHHHHhcCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            57998 77777888999999  9999999998 88999 4332211               1222222212222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|+..+|.+||++.++++
T Consensus       220 ~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         220 PDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.30  E-value=3e-12  Score=90.31  Aligned_cols=85  Identities=12%  Similarity=0.231  Sum_probs=63.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +....++.++|+||  +|++++++++ |..|| .......               ....+.....+..  +...
T Consensus       165 ~aPE~-~~~~~~~~~~Di~s--lG~~l~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  223 (257)
T cd05115         165 YAPEC-INFRKFSSRSDVWS--YGITMWEAFSYGQKPY-KKMKGPE---------------VMSFIEQGKRLDC--PAEC  223 (257)
T ss_pred             CCHHH-HccCCCCchhhHHH--HHHHHHHHhcCCCCCc-CcCCHHH---------------HHHHHHCCCCCCC--CCCC
Confidence            57898 66777889999999  9999999995 99999 4433221               2222333333333  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +.++.+++.+|+..+|++||++.++.+
T Consensus       224 ~~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         224 PPEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            789999999999999999999998853

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.30  E-value=3.5e-12  Score=90.42  Aligned_cols=85  Identities=16%  Similarity=0.199  Sum_probs=61.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +....++.++|+||  +|+++++|++ |..|| .+.+...               ....+........  +...
T Consensus       178 ~apE~-~~~~~~~~~~Di~s--lG~il~el~~~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  236 (270)
T cd05047         178 MAIES-LNYSVYTTNSDVWS--YGVLLWEIVSLGGTPY-CGMTCAE---------------LYEKLPQGYRLEK--PLNC  236 (270)
T ss_pred             CChHH-HccCCCCchhhHHH--HHHHHHHHHcCCCCCc-cccCHHH---------------HHHHHhCCCCCCC--CCcC
Confidence            57898 77778889999999  9999999996 99999 4432211               1222222112222  3345


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|+..+|.+||++.+++.
T Consensus       237 ~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         237 DDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            778899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.30  E-value=5.5e-12  Score=91.07  Aligned_cols=86  Identities=14%  Similarity=0.246  Sum_probs=62.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||. +.+..++.++|+||  +|++++++++ |..|| .......               .......... ....+...
T Consensus       210 ~aPE~-~~~~~~~~~~Diws--lGvil~el~t~g~~p~-~~~~~~~---------------~~~~~~~~~~-~~~~~~~~  269 (302)
T cd05055         210 MAPES-IFNCVYTFESDVWS--YGILLWEIFSLGSNPY-PGMPVDS---------------KFYKLIKEGY-RMAQPEHA  269 (302)
T ss_pred             CCHhh-hccCCCCcHhHHHH--HHHHHHHHHhCCCCCc-CCCCchH---------------HHHHHHHcCC-cCCCCCCC
Confidence            58998 77777889999999  9999999997 99998 4433221               1222222111 11113346


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+|+.+||..+|++||++.+++.
T Consensus       270 ~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         270 PAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             CHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.30  E-value=4.1e-12  Score=92.08  Aligned_cols=85  Identities=13%  Similarity=0.235  Sum_probs=62.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      |+||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       203 ~aPE~-~~~~~~~~~~Diws--lG~~l~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  261 (314)
T cd05099         203 MAPEA-LFDRVYTHQSDVWS--FGILMWEIFTLGGSPY-PGIPVEE---------------LFKLLREGHRMDK--PSNC  261 (314)
T ss_pred             cCHHH-HccCCcCccchhhH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            68998 77778899999999  9999999998 88888 4332211               1222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|..||++.+++.
T Consensus       262 ~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         262 THELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            778999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.30  E-value=5.7e-12  Score=93.77  Aligned_cols=85  Identities=14%  Similarity=0.219  Sum_probs=62.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   78 (133)
                      ||||+ +.+..++.++|+||  +|++++++++ |..|| .......               ......... ....  +..
T Consensus       283 ~aPE~-~~~~~~~~~sDi~s--lG~~l~ellt~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~--~~~  341 (375)
T cd05104         283 MAPES-IFNCVYTFESDVWS--YGILLWEIFSLGSSPY-PGMPVDS---------------KFYKMIKEGYRMLS--PEC  341 (375)
T ss_pred             eChhH-hcCCCCCCCCCHHH--HHHHHHHHHhcCCCCC-CCCCchH---------------HHHHHHHhCccCCC--CCC
Confidence            68999 77788999999999  9999999997 88888 4332211               111112211 1111  334


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      .+.++.+++.+||..||++||++.++++
T Consensus       342 ~~~~l~~li~~cl~~dP~~RPs~~eil~  369 (375)
T cd05104         342 APSEMYDIMKSCWDADPLKRPTFKQIVQ  369 (375)
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            5788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG1006|consensus

Probab=99.29  E-value=6.5e-13  Score=93.72  Aligned_cols=94  Identities=20%  Similarity=0.368  Sum_probs=74.2

Q ss_pred             CCCccccC-CCCCCCccccchhHHHHHHHHHHhCCCCCCCC-CCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHH-RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWN-ENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~-~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      ||||.+-. +.+|+..+|+||  +|+.++|+.+|..|+ .+ .+.+.               ++..+....+|.+..+..
T Consensus       234 mAPERi~p~~~gyDiRSDvWS--LGITL~EvAtG~fPy-r~w~svfe---------------ql~~Vv~gdpp~l~~~~~  295 (361)
T KOG1006|consen  234 MAPERIDPSDKGYDIRSDVWS--LGITLYEVATGNFPY-RKWDSVFE---------------QLCQVVIGDPPILLFDKE  295 (361)
T ss_pred             cChhccCCccCCcchhhhhhh--hcceEeeeecCCCCc-chHHHHHH---------------HHHHHHcCCCCeecCccc
Confidence            89999332 456999999999  999999999999999 32 22222               555555566665544433


Q ss_pred             ---hcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          79 ---LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        79 ---~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                         .+..+..|+..||..|.+.||+..+++.+||.+.
T Consensus       296 ~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~  332 (361)
T KOG1006|consen  296 CVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRM  332 (361)
T ss_pred             ccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhh
Confidence               7889999999999999999999999999999874

>KOG0197|consensus

Probab=99.29  E-value=3.9e-12  Score=95.86  Aligned_cols=84  Identities=17%  Similarity=0.273  Sum_probs=67.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      .|||. +..+.++.++|+||  ||++++|++ .|+.|+ .+....+               .+..+.  ....++.|...
T Consensus       371 tAPEa-~~~~~FS~kSDVWS--FGVlL~E~fT~G~~py-~~msn~e---------------v~~~le--~GyRlp~P~~C  429 (468)
T KOG0197|consen  371 TAPEA-LNYGKFSSKSDVWS--FGVLLWELFTYGRVPY-PGMSNEE---------------VLELLE--RGYRLPRPEGC  429 (468)
T ss_pred             cCHHH-HhhCCcccccceee--hhhhHHHHhccCCCCC-CCCCHHH---------------HHHHHh--ccCcCCCCCCC
Confidence            48999 99999999999999  999999998 577888 5443332               333333  33566667889


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +....+++..|+..+|++|||++.+.
T Consensus       430 P~~vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  430 PDEVYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             CHHHHHHHHHHhhCCcccCCCHHHHH
Confidence            99999999999999999999998654

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.28  E-value=3.8e-12  Score=91.93  Aligned_cols=85  Identities=13%  Similarity=0.229  Sum_probs=62.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++ |..|| .+.....               ....+........  +...
T Consensus       209 ~aPE~-~~~~~~~~~~Dvws--lG~~l~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  267 (307)
T cd05098         209 MAPEA-LFDRIYTHQSDVWS--FGVLLWEIFTLGGSPY-PGVPVEE---------------LFKLLKEGHRMDK--PSNC  267 (307)
T ss_pred             eChHH-hccCCCCcHHHHHH--HHHHHHHHHcCCCCCC-CcCCHHH---------------HHHHHHcCCCCCC--CCcC
Confidence            68998 66777889999999  9999999998 77888 4322111               1112222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|..||++.+++.
T Consensus       268 ~~~~~~li~~~l~~~p~~Rps~~evl~  294 (307)
T cd05098         268 TNELYMMMRDCWHAVPSQRPTFKQLVE  294 (307)
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.28  E-value=4.8e-12  Score=90.55  Aligned_cols=84  Identities=19%  Similarity=0.283  Sum_probs=61.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      |+||. +.+..++.++|+||  +|+++++|++ |..|| .+.....               .............  +...
T Consensus       196 ~apE~-~~~~~~~~~~Di~s--lG~~l~el~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  254 (290)
T cd05045         196 MAIES-LFDHIYTTQSDVWS--FGVLLWEIVTLGGNPY-PGIAPER---------------LFNLLKTGYRMER--PENC  254 (290)
T ss_pred             cCHHH-HccCCcchHhHHHH--HHHHHHHHHhcCCCCC-CCCCHHH---------------HHHHHhCCCCCCC--CCCC
Confidence            57888 66777889999999  9999999998 98898 4433211               1111111111222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +..+.+|+.+||..+|.+||++.+++
T Consensus       255 ~~~~~~~i~~cl~~~P~~Rp~~~~i~  280 (290)
T cd05045         255 SEEMYNLMLTCWKQEPDKRPTFADIS  280 (290)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHH
Confidence            78999999999999999999999986

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0614|consensus

Probab=99.28  E-value=4e-12  Score=96.40  Aligned_cols=92  Identities=17%  Similarity=0.349  Sum_probs=75.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +..++++.++|+|+  +|++++|+++|.+|| .+.+++.                .+.++..+.-.+..|+.++
T Consensus       586 VAPEI-ILnKGHD~avDyWa--LGIli~ELL~G~pPF-s~~dpmk----------------tYn~ILkGid~i~~Pr~I~  645 (732)
T KOG0614|consen  586 VAPEI-ILNKGHDRAVDYWA--LGILIYELLTGSPPF-SGVDPMK----------------TYNLILKGIDKIEFPRRIT  645 (732)
T ss_pred             ccchh-hhccCcchhhHHHH--HHHHHHHHHcCCCCC-CCCchHH----------------HHHHHHhhhhhhhcccccc
Confidence            58999 88999999999999  999999999999999 8877775                3333333322233367889


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~  112 (133)
                      ..+.++++++...+|..|..     +.++..|.||.+
T Consensus       646 k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  646 KTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             hhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence            99999999999999999974     889999999964

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.27  E-value=8.7e-12  Score=87.85  Aligned_cols=84  Identities=12%  Similarity=0.220  Sum_probs=61.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||+ +....++.++|+||  +|++++++++ |..|| .+.+...               ....+........  +...
T Consensus       170 ~~PE~-~~~~~~~~~~Di~s--lG~~l~~l~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  228 (260)
T cd05073         170 TAPEA-INFGSFTIKSDVWS--FGILLMEIVTYGRIPY-PGMSNPE---------------VIRALERGYRMPR--PENC  228 (260)
T ss_pred             cCHhH-hccCCcCccccchH--HHHHHHHHHhcCCCCC-CCCCHHH---------------HHHHHhCCCCCCC--cccC
Confidence            47898 66777888999999  9999999998 89999 5433221               2222222211122  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +..+.+++.+|+..+|++||++.+++
T Consensus       229 ~~~~~~~i~~~l~~~p~~Rp~~~~l~  254 (260)
T cd05073         229 PEELYNIMMRCWKNRPEERPTFEYIQ  254 (260)
T ss_pred             CHHHHHHHHHHcccCcccCcCHHHHH
Confidence            78899999999999999999998875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.27  E-value=7.5e-12  Score=89.24  Aligned_cols=84  Identities=13%  Similarity=0.123  Sum_probs=61.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   78 (133)
                      |+||. +....++.++|+||  +|++++++++ |..|| .+....                ....+.... .+..  +..
T Consensus       178 ~~pE~-~~~~~~~~~~Dv~s--lG~il~el~t~g~~p~-~~~~~~----------------~~~~~~~~~~~~~~--~~~  235 (279)
T cd05111         178 MALES-ILFGRYTHQSDVWS--YGVTVWEMMSYGAEPY-AGMRPH----------------EVPDLLEKGERLAQ--PQI  235 (279)
T ss_pred             cCHHH-hccCCcCchhhHHH--HHHHHHHHHcCCCCCC-CCCCHH----------------HHHHHHHCCCcCCC--CCC
Confidence            57898 66778999999999  9999999997 99999 443221                112222221 1221  334


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      .+..+.+++.+|+..+|+.||++.++++
T Consensus       236 ~~~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         236 CTIDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            5677889999999999999999999864

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.27  E-value=8.2e-12  Score=87.59  Aligned_cols=86  Identities=17%  Similarity=0.242  Sum_probs=62.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||+ +....++.++|+||  +|+++++|++ |..|| ...+...               ....+... ......+...
T Consensus       167 ~~pE~-~~~~~~~~~~Di~s--lG~~l~el~t~g~~p~-~~~~~~~---------------~~~~~~~~-~~~~~~~~~~  226 (257)
T cd05040         167 CAPES-LRTRTFSHASDVWM--FGVTLWEMFTYGEEPW-AGLSGSQ---------------ILKKIDKE-GERLERPEAC  226 (257)
T ss_pred             cCHHH-hcccCcCchhhhHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHhc-CCcCCCCccC
Confidence            57888 77778899999999  9999999998 99999 4332221               12222211 1122223456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|+..+|.+||++.++++
T Consensus       227 ~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         227 PQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             CHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence            788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.27  E-value=9.9e-12  Score=87.63  Aligned_cols=87  Identities=16%  Similarity=0.326  Sum_probs=62.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .+.....             ......+.....+... ....+
T Consensus       173 ~ape~-~~~~~~~~~~Dv~s--lG~il~~l~~g~~p~-~~~~~~~-------------~~~~~~~~~~~~~~~~-~~~~~  234 (267)
T cd08229         173 MSPER-IHENGYNFKSDIWS--LGCLLYEMAALQSPF-YGDKMNL-------------YSLCKKIEQCDYPPLP-SDHYS  234 (267)
T ss_pred             cCHHH-hcCCCccchhhHHH--HHHHHHHHHhCCCCc-ccccchH-------------HHHhhhhhcCCCCCCC-ccccc
Confidence            57898 77777888999999  999999999999999 5432211             0011222222222221 23467


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      ..+++++.+|+..+|.+|||+.+++
T Consensus       235 ~~~~~li~~~l~~~p~~Rpt~~~i~  259 (267)
T cd08229         235 EELRQLVNMCINPDPEKRPDITYVY  259 (267)
T ss_pred             HHHHHHHHHhcCCCcccCCCHHHHH
Confidence            8899999999999999999999775

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.27  E-value=9.1e-12  Score=87.40  Aligned_cols=85  Identities=15%  Similarity=0.210  Sum_probs=61.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||. +....++.++|+||  +|++++++++ |..|| .......               ....+........  +...
T Consensus       166 ~ape~-~~~~~~~~~~Di~s--lG~il~~l~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  224 (256)
T cd05039         166 TAPEA-LREKKFSTKSDVWS--FGILLWEIYSFGRVPY-PRIPLKD---------------VVPHVEKGYRMEA--PEGC  224 (256)
T ss_pred             cCchh-hcCCcCCcHHHHHH--HHHHHHHHHhcCCCCC-CCCCHHH---------------HHHHHhcCCCCCC--ccCC
Confidence            47998 66777888999999  9999999997 99998 4322111               1112222212222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++.+.+++.+||..+|++||++.+++.
T Consensus       225 ~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         225 PPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.27  E-value=7.7e-12  Score=88.97  Aligned_cols=85  Identities=12%  Similarity=0.126  Sum_probs=61.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      |+||. .....++.++|+||  +|++++++++ |..|| .......               ....+.....+..  +...
T Consensus       178 ~~PE~-~~~~~~~~~~Di~s--lG~~l~el~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  236 (279)
T cd05109         178 MALES-ILHRRFTHQSDVWS--YGVTVWELMTFGAKPY-DGIPARE---------------IPDLLEKGERLPQ--PPIC  236 (279)
T ss_pred             CCHHH-hccCCCCchhHHHH--HHHHHHHHHcCCCCCC-CCCCHHH---------------HHHHHHCCCcCCC--CccC
Confidence            58998 67778899999999  9999999987 88888 4322111               1111112122222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||+.||++.+++.
T Consensus       237 ~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         237 TIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            788999999999999999999999873

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG1026|consensus

Probab=99.26  E-value=4.5e-12  Score=100.03  Aligned_cols=83  Identities=13%  Similarity=0.248  Sum_probs=70.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      |+||. +.++.|+..+||||  +|+++||++ .|.-|+ .+-..-+               .+..+.....  ++.|+..
T Consensus       672 MppEs-Ily~kFTteSDVWs--~GVvLWEIFsyG~QPy-~glSn~E---------------VIe~i~~g~l--L~~Pe~C  730 (774)
T KOG1026|consen  672 MPPES-ILYGKFTTESDVWS--FGVVLWEIFSYGKQPY-YGLSNQE---------------VIECIRAGQL--LSCPENC  730 (774)
T ss_pred             CCHHH-hhcCcccchhhhhh--hhhhhhhhhccccCcc-cccchHH---------------HHHHHHcCCc--ccCCCCC
Confidence            89999 99999999999999  999999998 677888 6655444               5555555443  4447789


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHH
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLL  104 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~el  104 (133)
                      +..+.+++..|++..|.+||++.|+
T Consensus       731 P~~vY~LM~~CW~~~P~~RPsF~eI  755 (774)
T KOG1026|consen  731 PTEVYSLMLECWNENPKRRPSFKEI  755 (774)
T ss_pred             CHHHHHHHHHHhhcCcccCCCHHHH
Confidence            9999999999999999999999997

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.26  E-value=1.2e-11  Score=88.09  Aligned_cols=100  Identities=10%  Similarity=0.104  Sum_probs=61.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||+ +....++.++|+||  +|++++++++|..|+ ...................................  +...+
T Consensus       177 ~~PE~-~~~~~~~~~~Di~s--lG~~l~el~tg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  250 (283)
T cd05080         177 YAVEC-LKENKFSYASDVWS--FGVTLYELLTHCDSK-QSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPC--PKNCP  250 (283)
T ss_pred             eCHhH-hcccCCCcccccHH--HHHHHHHHHhCCCCC-CCCcchhhhhhcccccccchhhhhhhhhcCCCCCC--CCCCC
Confidence            47888 66777889999999  999999999999988 33221100000000000000000000111111111  34567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+.+++.+|+..+|+.||++++++.
T Consensus       251 ~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         251 QEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHH
Confidence            89999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.26  E-value=8.7e-12  Score=88.09  Aligned_cols=86  Identities=20%  Similarity=0.305  Sum_probs=62.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. +.+..++.++|+||  +|++++++++|..|| ...+...               ....+......... ....+
T Consensus       180 ~~Pe~-~~~~~~~~~~Dv~s--lG~ll~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~-~~~~~  239 (269)
T cd08528         180 SCPEI-VKNEPYGEKADVWA--FGCILYQMCTLQPPF-YSTNMLS---------------LATKIVEAVYEPLP-EGMYS  239 (269)
T ss_pred             cChhh-hcCCCCchHHHHHH--HHHHHHHHHhCCCcc-cccCHHH---------------HHHHHhhccCCcCC-cccCC
Confidence            57898 66777889999999  999999999999999 4332221               12222222212221 12467


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +.+.+++.+|+..||+.||++.++..
T Consensus       240 ~~l~~li~~cl~~~p~~Rp~~~e~~~  265 (269)
T cd08528         240 EDVTDVITSCLTPDAEARPDIIQVSA  265 (269)
T ss_pred             HHHHHHHHHHCCCCCccCCCHHHHHH
Confidence            88999999999999999999999754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.26  E-value=6.9e-12  Score=91.67  Aligned_cols=86  Identities=13%  Similarity=0.228  Sum_probs=63.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++ |..|| .+.+...               ....+........  +...
T Consensus       203 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  261 (334)
T cd05100         203 MAPEA-LFDRVYTHQSDVWS--FGVLLWEIFTLGGSPY-PGIPVEE---------------LFKLLKEGHRMDK--PANC  261 (334)
T ss_pred             cCHHH-hccCCcCchhhhHH--HHHHHHHHHhcCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            68998 77778899999999  9999999998 88888 4332211               2222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      +..+.+++.+|+..+|.+||++.+++.+
T Consensus       262 ~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         262 THELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            7889999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.26  E-value=1.4e-11  Score=86.74  Aligned_cols=83  Identities=13%  Similarity=0.289  Sum_probs=57.9

Q ss_pred             CCCccccCC-CCCCCccccchhHHHHHHHHHHhCC-CCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHR-KQYGPKVGYFGHWVSMAYLKMIEGE-PPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~-~~~~~~~Diws~~~g~~~~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      ||||+ +.+ ..++.++|+||  +|++++++++|. .|+ .......               ... . ......+  +..
T Consensus       171 ~aPE~-~~~~~~~~~~~Diws--lG~~l~~l~~g~~~~~-~~~~~~~---------------~~~-~-~~~~~~~--~~~  227 (258)
T cd05078         171 VPPEC-IENPQNLSLAADKWS--FGTTLWEIFSGGDKPL-SALDSQK---------------KLQ-F-YEDRHQL--PAP  227 (258)
T ss_pred             cCchh-ccCCCCCCchhhHHH--HHHHHHHHHcCCCCCh-hhccHHH---------------HHH-H-HHccccC--CCC
Confidence            68999 544 56788999999  999999999984 555 3222111               111 1 1111222  223


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ....+.+++.+||+.+|++||+++++++
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rps~~~il~  255 (258)
T cd05078         228 KWTELANLINQCMDYEPDFRPSFRAIIR  255 (258)
T ss_pred             CcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            4577899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.25  E-value=7.1e-12  Score=90.89  Aligned_cols=86  Identities=12%  Similarity=0.143  Sum_probs=62.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      |+||+ +....++.++|+||  +|++++++++ |..|| .+....                ....+.... ...+.+...
T Consensus       178 ~apE~-~~~~~~~~~~Di~s--lGv~l~el~t~g~~p~-~~~~~~----------------~~~~~~~~~-~~~~~~~~~  236 (316)
T cd05108         178 MALES-ILHRIYTHQSDVWS--YGVTVWELMTFGSKPY-DGIPAS----------------EISSILEKG-ERLPQPPIC  236 (316)
T ss_pred             cChHH-hccCCCCchhhhHH--HHHHHHHHHcCCCCCC-CCCCHH----------------HHHHHHhCC-CCCCCCCCC
Confidence            68998 77778899999999  9999999987 99998 432211                112222211 111113456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      +..+.+++.+|+..+|..||++.+++.+
T Consensus       237 ~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         237 TIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            7788999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.25  E-value=8.9e-12  Score=87.61  Aligned_cols=84  Identities=15%  Similarity=0.243  Sum_probs=61.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||. +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       171 ~~PE~-~~~~~~~~~~Di~s--lG~il~~l~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  229 (261)
T cd05034         171 TAPEA-ANYGRFTIKSDVWS--FGILLTEIVTYGRVPY-PGMTNRE---------------VLEQVERGYRMPR--PPNC  229 (261)
T ss_pred             cCHHH-hccCCcCchhHHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            47888 66777888999999  9999999998 99999 4433221               2222322222222  3345


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +..+.+++.+||..+|.+||++.++.
T Consensus       230 ~~~~~~~i~~~l~~~p~~Rp~~~~l~  255 (261)
T cd05034         230 PEELYDLMLQCWDKDPEERPTFEYLQ  255 (261)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHH
Confidence            78899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.25  E-value=1.2e-11  Score=86.50  Aligned_cols=85  Identities=20%  Similarity=0.289  Sum_probs=62.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||. .....++.++|+|+  +|++++++++ |.+|| ...+...               ....+........  +...
T Consensus       171 ~~Pe~-~~~~~~~~~~Di~s--lG~i~~~l~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  229 (258)
T smart00219      171 MAPES-LKDGKFTSKSDVWS--FGVLLWEIFTLGESPY-PGMSNEE---------------VLEYLKKGYRLPK--PENC  229 (258)
T ss_pred             cChHH-hccCCCCcchhHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHhcCCCCCC--CCcC
Confidence            57888 66777889999999  9999999997 78888 4322111               2222222222222  3447


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|+..+|..|||+.++++
T Consensus       230 ~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      230 PPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             CHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence            889999999999999999999999874

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.25  E-value=8.6e-12  Score=91.24  Aligned_cols=93  Identities=17%  Similarity=0.368  Sum_probs=64.3

Q ss_pred             CCCccccCC-----CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcc
Q psy9738           1 MAPEGGHHR-----KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIK   74 (133)
Q Consensus         1 maPE~~~~~-----~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   74 (133)
                      ||||+ +..     ..++.++|+||  +|+++++|++|..|| ...+...               ....+.... ...++
T Consensus       170 ~aPE~-~~~~~~~~~~~~~~~DiwS--lGvil~ell~g~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~p  230 (331)
T cd05624         170 ISPEI-LQAMEDGMGKYGPECDWWS--LGVCMYEMLYGETPF-YAESLVE---------------TYGKIMNHEERFQFP  230 (331)
T ss_pred             CCHHH-HhccccCCCCCCCcccEEe--eehhhhhhhhCCCCc-cCCCHHH---------------HHHHHHcCCCcccCC
Confidence            68998 543     45788999999  999999999999999 5443222               222222211 11221


Q ss_pred             h-hhhhcHHHHHHHHHHhhhcccc--cCCHHHHhcCccccc
Q psy9738          75 E-KEKLSQIFQDFLDQCLEEEVET--RASASLLLKHPFLKI  112 (133)
Q Consensus        75 ~-~~~~~~~~~~ll~~~L~~~p~~--R~s~~ell~h~~~~~  112 (133)
                      . ...++..+++++.+||..++.+  |+++++++.|+||..
T Consensus       231 ~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~  271 (331)
T cd05624         231 SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG  271 (331)
T ss_pred             CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence            1 1235789999999999865544  468999999999975

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.25  E-value=1.2e-12  Score=92.63  Aligned_cols=85  Identities=18%  Similarity=0.328  Sum_probs=58.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||. +....++.++||||  +|++++++++ |..|| ...+...               ....+........  +...
T Consensus       172 ~aPE~-~~~~~~~~ksDVys--fG~~l~ei~~~~~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  230 (259)
T PF07714_consen  172 LAPEV-LKDGEYTKKSDVYS--FGMLLYEILTLGKFPF-SDYDNEE---------------IIEKLKQGQRLPI--PDNC  230 (259)
T ss_dssp             S-HHH-HHHSEESHHHHHHH--HHHHHHHHHTTSSGTT-TTSCHHH---------------HHHHHHTTEETTS--BTTS
T ss_pred             ccccc-cccccccccccccc--cccccccccccccccc-ccccccc---------------cccccccccccee--ccch
Confidence            57888 76677889999999  9999999999 67888 4332111               2222322222222  4457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|.+||++.++++
T Consensus       231 ~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  231 PKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             BHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             hHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            888999999999999999999999863

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.25  E-value=9.8e-12  Score=87.92  Aligned_cols=85  Identities=12%  Similarity=0.325  Sum_probs=62.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||. +.+..++.++|+||  +|++++++++ |..|| ...+...               ....+.......  .+...
T Consensus       178 ~~PE~-~~~~~~~~~~Dvws--lG~~l~e~l~~g~~p~-~~~~~~~---------------~~~~i~~~~~~~--~~~~~  236 (269)
T cd05065         178 TAPEA-IAYRKFTSASDVWS--YGIVMWEVMSYGERPY-WDMSNQD---------------VINAIEQDYRLP--PPMDC  236 (269)
T ss_pred             cCHhH-hccCcccchhhhhh--hHHHHHHHhcCCCCCC-CCCCHHH---------------HHHHHHcCCcCC--CcccC
Confidence            57998 77788899999999  9999999885 99999 4432211               222222221111  13456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|+..+|++||++.+++.
T Consensus       237 ~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         237 PTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            788899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.25  E-value=1e-11  Score=89.42  Aligned_cols=85  Identities=13%  Similarity=0.222  Sum_probs=62.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       206 ~aPE~-~~~~~~~~~~Di~s--lG~~l~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  264 (304)
T cd05101         206 MAPEA-LFDRVYTHQSDVWS--FGVLMWEIFTLGGSPY-PGIPVEE---------------LFKLLKEGHRMDK--PANC  264 (304)
T ss_pred             eCchh-hccCCCCchhhHHH--HHHHHHHHHcCCCCCc-ccCCHHH---------------HHHHHHcCCcCCC--CCCC
Confidence            58998 77778899999999  9999999997 77888 4332111               1222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+|+.+||..+|.+||++.++++
T Consensus       265 ~~~~~~li~~cl~~~p~~Rps~~e~l~  291 (304)
T cd05101         265 TNELYMMMRDCWHAIPSHRPTFKQLVE  291 (304)
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0595|consensus

Probab=99.24  E-value=6.3e-12  Score=92.64  Aligned_cols=91  Identities=27%  Similarity=0.453  Sum_probs=69.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC--CCCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN--KKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   78 (133)
                      ||||+ +...+|+.++|+||  +|+++|++++|.+|| ...+..+               ....+...  ..+.+  +..
T Consensus       181 MAPEV-~~~~~YdAKADLWS--iG~Ilyq~l~g~~Pf-~a~t~~e---------------L~~~~~k~~~~~~~~--~~~  239 (429)
T KOG0595|consen  181 MAPEV-IMSQQYDAKADLWS--IGTILYQCLTGKPPF-DAETPKE---------------LLLYIKKGNEIVPVL--PAE  239 (429)
T ss_pred             cCHHH-HHhccccchhhHHH--HHHHHHHHHhCCCCc-cccCHHH---------------HHHHHhccccccCch--hhh
Confidence            89999 88999999999999  999999999999999 5444332               22222222  12222  345


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      .+....+++...|+.++.+|.+..+-+.|+++..
T Consensus       240 ~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~  273 (429)
T KOG0595|consen  240 LSNPLRELLISLLQRNPKDRISFEDFFDHPFLAA  273 (429)
T ss_pred             ccCchhhhhhHHHhcCccccCchHHhhhhhhccc
Confidence            6677778999999999999999999888888864

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.24  E-value=1.8e-11  Score=86.61  Aligned_cols=85  Identities=13%  Similarity=0.215  Sum_probs=58.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||.+.....++.++|+||  +|+++++++ .|..|+ .......                ........ ...  ....
T Consensus       175 ~aPE~~~~~~~~~~~~Diws--lG~~l~el~~~~~~p~-~~~~~~~----------------~~~~~~~~-~~~--~~~~  232 (262)
T cd05077         175 IAPECVEDSKNLSIAADKWS--FGTTLWEICYNGEIPL-KDKTLAE----------------KERFYEGQ-CML--VTPS  232 (262)
T ss_pred             cChhhhcCCCCCCchhHHHH--HHHHHHHHHhCCCCCC-CCcchhH----------------HHHHHhcC-ccC--CCCC
Confidence            68998333567889999999  999999997 577777 4322111                11111111 111  1123


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      +..+.+++.+||..||.+||++.+++++
T Consensus       233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         233 CKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             hHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            4678899999999999999999999853

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.24  E-value=1.3e-11  Score=86.63  Aligned_cols=85  Identities=18%  Similarity=0.214  Sum_probs=62.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||. +....++.+.|+||  +|++++++++ |..|| .......               ....+.....+..  +...
T Consensus       164 ~~pe~-~~~~~~~~~~Dv~s--lG~~l~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  222 (254)
T cd05083         164 TAPEA-LKHKKFSSKSDVWS--YGVLLWEVFSYGRAPY-PKMSLKE---------------VKECVEKGYRMEP--PEGC  222 (254)
T ss_pred             cCHHH-hccCCcCchhhHHH--HHHHHHHHHhCCCCCC-ccCCHHH---------------HHHHHhCCCCCCC--CCcC
Confidence            57898 77778889999999  9999999997 89998 4332211               1122222211221  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|..||++.+++.
T Consensus       223 ~~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         223 PADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            788999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.23  E-value=1.4e-11  Score=87.13  Aligned_cols=85  Identities=12%  Similarity=0.305  Sum_probs=61.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      |+||. +.+..++.++|+|+  +|++++++++ |..|| .......               ....+........  +...
T Consensus       176 ~~pe~-~~~~~~~~~~Dv~s--lG~~l~ell~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  234 (267)
T cd05066         176 TAPEA-IAYRKFTSASDVWS--YGIVMWEVMSYGERPY-WEMSNQD---------------VIKAIEEGYRLPA--PMDC  234 (267)
T ss_pred             cCHhH-hccCccCchhhhHH--HHHHHHHHhcCCCCCc-ccCCHHH---------------HHHHHhCCCcCCC--CCCC
Confidence            57898 77778899999999  9999999885 99999 4433221               1222222211221  3346


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++.+.+++.+|++.+|..||++.++++
T Consensus       235 ~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         235 PAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             CHHHHHHHHHHcccCchhCCCHHHHHH
Confidence            788999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.23  E-value=1.7e-11  Score=87.78  Aligned_cols=87  Identities=10%  Similarity=0.130  Sum_probs=59.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh--CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC-----CCCCc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE--GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN-----KKPEI   73 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~   73 (133)
                      ||||+ +....++.++|+||  +|++++++++  |..|| .......               .+......     .....
T Consensus       199 ~aPE~-~~~~~~~~~~Dv~s--lG~~l~el~~~~~~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~  259 (296)
T cd05051         199 MAWES-VLLGKFTTKSDVWA--FGVTLWEILTLCREQPY-EHLTDQQ---------------VIENAGHFFRDDGRQIYL  259 (296)
T ss_pred             cCHHH-hhcCCCCccchhhh--hHHHHHHHHhcCCCCCC-CCcChHH---------------HHHHHHhccccccccccC
Confidence            58998 66778899999999  9999999987  56677 3222111               11111111     11111


Q ss_pred             chhhhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          74 KEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        74 ~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+...+..+.+++.+||..+|.+||++.++++
T Consensus       260 ~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         260 PRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             CCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            123345688999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.22  E-value=2.9e-11  Score=85.07  Aligned_cols=88  Identities=19%  Similarity=0.362  Sum_probs=62.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||. +.+..++.++|+||  +|++++++++|..|| .......             ......+.....+..+ ....+
T Consensus       173 ~apE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~-------------~~~~~~~~~~~~~~~~-~~~~~  234 (267)
T cd08224         173 MSPER-IHENGYNFKSDIWS--LGCLLYEMAALQSPF-YGDKMNL-------------YSLCKKIEKCDYPPLP-ADHYS  234 (267)
T ss_pred             cCHHH-hccCCCCchhcHHH--HHHHHHHHHHCCCCc-ccCCccH-------------HHHHhhhhcCCCCCCC-hhhcC
Confidence            47898 67778889999999  999999999999999 4332110             0011112222222221 12567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+.+++.+||..+|+.||++.++++
T Consensus       235 ~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         235 EELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            88999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG0666|consensus

Probab=99.22  E-value=2e-11  Score=88.00  Aligned_cols=110  Identities=15%  Similarity=0.157  Sum_probs=68.4

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCC-CCcccchhhHHhhHHHH-------------------
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPL-RPHFLIPYLFILSCRQA-------------------   61 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~-------------------   61 (133)
                      |||.++....|++.+|+|+  +||++.|+++-.+.| .+.... ...+..+..-+....+.                   
T Consensus       207 APELLLGa~hYT~AiDvWA--iGCIfaElLtl~PlF-~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q  283 (438)
T KOG0666|consen  207 APELLLGARHYTKAIDVWA--IGCIFAELLTLEPLF-KGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQ  283 (438)
T ss_pred             ChHHhcccccccchhhhHH--HHHHHHHHHccCccc-cchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchH
Confidence            7999778889999999999  999999999999999 654321 11111111100000000                   


Q ss_pred             --HHHhhhCCCCC--cch---h-hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          62 --LYLIATNKKPE--IKE---K-EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        62 --~~~~~~~~~~~--~~~---~-~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                        +........-.  +..   . ..-++...+++.++|.+||.+|.|++++|+|+||....
T Consensus       284 ~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~  344 (438)
T KOG0666|consen  284 TLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP  344 (438)
T ss_pred             HHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence              00000000000  000   0 00234477999999999999999999999999998653

>KOG1151|consensus

Probab=99.22  E-value=6.6e-12  Score=94.21  Aligned_cols=97  Identities=21%  Similarity=0.303  Sum_probs=74.1

Q ss_pred             CCCccccCC---CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhh
Q psy9738           1 MAPEGGHHR---KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKE   77 (133)
Q Consensus         1 maPE~~~~~---~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (133)
                      ++||+++-+   ...+.++|+||  +|+++|.++.|+.||  +.+..++++.           ....|.......++..+
T Consensus       647 LPPEcFvVgkePPKIsnKVDVWS--vGVIFyQClYGrKPF--GhnqsQQdIL-----------qeNTIlkAtEVqFP~KP  711 (775)
T KOG1151|consen  647 LPPECFVVGKEPPKISNKVDVWS--VGVIFYQCLYGRKPF--GHNQSQQDIL-----------QENTILKATEVQFPPKP  711 (775)
T ss_pred             cCcceeecCCCCCccccceeeEe--eehhhhhhhccCCCC--CCchhHHHHH-----------hhhchhcceeccCCCCC
Confidence            478885544   35678999999  999999999999999  6665542221           12223333445565566


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ..+.++++||++||++.-++|....++..||+|..
T Consensus       712 vVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  712 VVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             ccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence            78999999999999999999999999999999864

>KOG0669|consensus

Probab=99.22  E-value=3.2e-11  Score=84.87  Aligned_cols=118  Identities=21%  Similarity=0.290  Sum_probs=75.1

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcc------------cchhhHHhhHHHHHHHhhhCC
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHF------------LIPYLFILSCRQALYLIATNK   69 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~   69 (133)
                      +||.++.+..|+++.|+|.  -||++.+|.++.+.+ .+....++.-            ++|...-+.+.+.   +..++
T Consensus       196 ppEllLG~r~yg~~iDiWg--AgCimaeMwtrspim-qgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~s---ie~eP  269 (376)
T KOG0669|consen  196 PPELLLGDREYGPPIDIWG--AGCIMAEMWTRSPIM-QGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQS---IELEP  269 (376)
T ss_pred             CHHHhhcccccCCcchhHh--HHHHHHHHHccCccc-cCChHHHHHHHHHHHhccCCcccCCCcccchHHHh---ccCCC
Confidence            6888778899999999999  999999999999988 5543322000            1111111111111   11110


Q ss_pred             CC-----Ccch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC-CCCCChhHHHHH
Q psy9738          70 KP-----EIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA-RPLASLTPLIMA  125 (133)
Q Consensus        70 ~~-----~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~-~~~~~~~~~~~~  125 (133)
                      .+     .++.   +..-.+++.+++.++|.+||.+|+.+++++.|.||... ...+.++....-
T Consensus       270 l~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~pqanl~~ml~t  334 (376)
T KOG0669|consen  270 LPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMPQANLQDMLST  334 (376)
T ss_pred             CCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcchhhHHHHHHH
Confidence            00     0000   01123577899999999999999999999999998654 444676665443

>KOG1095|consensus

Probab=99.21  E-value=1.4e-11  Score=100.02  Aligned_cols=85  Identities=14%  Similarity=0.266  Sum_probs=68.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||. +.++.++.++||||  ||+++||++ .|..|| .+.+..+               .+.......  .+..|...
T Consensus       871 m~PEs-l~d~iFtskSDvWs--FGVllWEifslG~~PY-~~~~n~~---------------v~~~~~~gg--RL~~P~~C  929 (1025)
T KOG1095|consen  871 MPPES-LKDGIFTSKSDVWS--FGVLLWEIFSLGATPY-PSRSNFE---------------VLLDVLEGG--RLDPPSYC  929 (1025)
T ss_pred             CCHHH-Hhhcccccccchhh--hHHHHHHHHhCCCCCC-CCcchHH---------------HHHHHHhCC--ccCCCCCC
Confidence            89999 77899999999999  999999998 678899 5544443               333233333  55557778


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|++.+|+.||++..+++
T Consensus       930 P~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  930 PEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             ChHHHHHHHHHccCChhhCccHHHHHh
Confidence            888899999999999999999998875

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.21  E-value=3.1e-11  Score=85.55  Aligned_cols=86  Identities=19%  Similarity=0.294  Sum_probs=61.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||. +.+..++.++|+||  +|++++++++ |..|| .......               .. ............+...
T Consensus       185 ~~PE~-~~~~~~~~~~Di~s--lG~~l~~l~~~~~~p~-~~~~~~~---------------~~-~~~~~~~~~~~~~~~~  244 (275)
T cd05046         185 LAPEA-VQEDDFSTKSDVWS--FGVLMWEVFTQGELPF-YGLSDEE---------------VL-NRLQAGKLELPVPEGC  244 (275)
T ss_pred             cChhh-hccCCCCchhhHHH--HHHHHHHHHhCCCCCc-cccchHH---------------HH-HHHHcCCcCCCCCCCC
Confidence            57888 66667888999999  9999999998 77888 4322211               11 1222222222223456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|..||++.+++.
T Consensus       245 ~~~l~~~i~~~l~~~p~~Rp~~~~~l~  271 (275)
T cd05046         245 PSRLYKLMTRCWAVNPKDRPSFSELVS  271 (275)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.21  E-value=1.5e-11  Score=86.99  Aligned_cols=85  Identities=13%  Similarity=0.191  Sum_probs=60.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ++||. .....++.++|+||  +|++++++++ |.+|| .+.....               ....+........  +...
T Consensus       182 ~~pe~-~~~~~~~~~sDi~s--lG~il~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  240 (273)
T cd05074         182 LALES-LADNVYTTHSDVWA--FGVTMWEIMTRGQTPY-AGVENSE---------------IYNYLIKGNRLKQ--PPDC  240 (273)
T ss_pred             cCHhH-HhcCccchhhhhHH--HHHHHHHHhhCCCCCC-CCCCHHH---------------HHHHHHcCCcCCC--CCCC
Confidence            46777 66667888999999  9999999998 88888 4332211               1111222221221  2345


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|+..+|+.||++.+++.
T Consensus       241 ~~~~~~l~~~~l~~~p~~Rps~~~~~~  267 (273)
T cd05074         241 LEDVYELMCQCWSPEPKCRPSFQHLRD  267 (273)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.20  E-value=2.1e-11  Score=95.35  Aligned_cols=35  Identities=20%  Similarity=0.208  Sum_probs=30.7

Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                      ....+|+.+||+.||.+|||+.++|+||||+....
T Consensus       424 ~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~  458 (566)
T PLN03225        424 GAGWELLKSMMRFKGRQRISAKAALAHPYFDREGL  458 (566)
T ss_pred             hHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence            44568999999999999999999999999986443

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.19  E-value=3.6e-11  Score=90.44  Aligned_cols=86  Identities=19%  Similarity=0.233  Sum_probs=62.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|++++++++ |..|| .......               .......... ....+...
T Consensus       306 ~aPE~-~~~~~~~~~~DiwS--lGvil~ellt~g~~P~-~~~~~~~---------------~~~~~~~~~~-~~~~~~~~  365 (400)
T cd05105         306 MAPES-IFDNLYTTLSDVWS--YGILLWEIFSLGGTPY-PGMIVDS---------------TFYNKIKSGY-RMAKPDHA  365 (400)
T ss_pred             EChhh-hcCCCCCchhhHHH--HHHHHHHHHHCCCCCC-cccchhH---------------HHHHHHhcCC-CCCCCccC
Confidence            58998 77778899999999  9999999996 88898 4332211               1222222211 11123456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|+.||++.++.+
T Consensus       366 ~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         366 TQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             CHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            788999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.18  E-value=4.2e-11  Score=87.98  Aligned_cols=86  Identities=15%  Similarity=0.224  Sum_probs=62.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHH-hhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYL-IATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   78 (133)
                      ||||+ +.+..++.++|+|+  +|++++++++ |..|| .......               .... +........  +..
T Consensus       248 ~aPE~-~~~~~~~~~~Di~s--lG~~l~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~--~~~  306 (343)
T cd05103         248 MAPET-IFDRVYTIQSDVWS--FGVLLWEIFSLGASPY-PGVKIDE---------------EFCRRLKEGTRMRA--PDY  306 (343)
T ss_pred             ECcHH-hcCCCCCchhhHHH--HHHHHHHHHHCCCCCC-CCccccH---------------HHHHHHhccCCCCC--CCC
Confidence            58998 66778899999999  9999999996 88888 4332211               1111 111111222  334


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      .++.+.+++..|++.+|++||++.++++|
T Consensus       307 ~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         307 TTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            57788999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.18  E-value=4e-11  Score=86.11  Aligned_cols=91  Identities=9%  Similarity=0.105  Sum_probs=58.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh--CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE--GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      |+||+ ...+.++.++|+||  +|++++++++  |..|| .......  .      +..........  ......+.+..
T Consensus       199 ~~pe~-~~~~~~~~~~DiwS--lG~~l~el~~~~~~~p~-~~~~~~~--~------~~~~~~~~~~~--~~~~~~~~~~~  264 (296)
T cd05095         199 MSWES-ILLGKFTTASDVWA--FGVTLWEILTLCKEQPY-SQLSDEQ--V------IENTGEFFRDQ--GRQVYLPKPAL  264 (296)
T ss_pred             CCHHH-HhcCCccchhhhhH--HHHHHHHHHHhCCCCCc-cccChHH--H------HHHHHHHHhhc--cccccCCCCCC
Confidence            57887 55667899999999  9999999997  66777 4322211  0      00000000000  01111111334


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      .+..+.+|+.+||+.||.+||++.++.
T Consensus       265 ~~~~~~~li~~cl~~~p~~Rp~~~~i~  291 (296)
T cd05095         265 CPDSLYKLMLSCWRRNAKERPSFQEIH  291 (296)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence            568899999999999999999999985

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.18  E-value=3.7e-11  Score=85.44  Aligned_cols=84  Identities=15%  Similarity=0.174  Sum_probs=61.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      |+||. +....++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       178 ~~PE~-~~~~~~~~~~Di~s--lG~~l~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  236 (279)
T cd05057         178 MALES-ILHRIYTHKSDVWS--YGVTVWELMTFGAKPY-EGIPAVE---------------IPDLLEKGERLPQ--PPIC  236 (279)
T ss_pred             cCHHH-hhcCCcCchhhHHH--HHHHHHHHhcCCCCCC-CCCCHHH---------------HHHHHhCCCCCCC--CCCC
Confidence            57888 66778889999999  9999999998 99999 4432211               1122222222222  3446


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +..+.+++.+|+..+|..||++.+++
T Consensus       237 ~~~~~~~~~~~l~~~p~~Rp~~~~l~  262 (279)
T cd05057         237 TIDVYMVLVKCWMIDAESRPTFKELI  262 (279)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHH
Confidence            77889999999999999999999876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG4236|consensus

Probab=99.17  E-value=1.8e-12  Score=98.85  Aligned_cols=105  Identities=20%  Similarity=0.281  Sum_probs=82.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +..++|+.+.|+||  +|+++|-.++|.+|| ..+....+              +++.....-++.  ....++
T Consensus       733 LaPEV-LrnkGyNrSLDMWS--VGVIiYVsLSGTFPF-NEdEdInd--------------QIQNAaFMyPp~--PW~eis  792 (888)
T KOG4236|consen  733 LAPEV-LRNKGYNRSLDMWS--VGVIIYVSLSGTFPF-NEDEDIND--------------QIQNAAFMYPPN--PWSEIS  792 (888)
T ss_pred             cCHHH-Hhhcccccccccee--eeEEEEEEecccccC-CCccchhH--------------HhhccccccCCC--chhhcC
Confidence            58999 99999999999999  999999999999999 32222210              333322222222  146789


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMA  125 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~  125 (133)
                      +.+.+||..+|+..-.+|.+.+..|.|||++.......+..+..+
T Consensus       793 ~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~DLRelE~~  837 (888)
T KOG4236|consen  793 PEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLDLRELEVR  837 (888)
T ss_pred             HHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHHHHHHHHHh
Confidence            999999999999999999999999999999998877777766544

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.17  E-value=8.1e-11  Score=84.69  Aligned_cols=92  Identities=13%  Similarity=0.053  Sum_probs=61.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ ..+..++.++|+||  +|++++++++|..|| .+......  .+...+..    ....+. .....   ....+
T Consensus       200 ~ape~-~~~~~~~~~~DiwS--lG~~l~el~~g~~P~-~~~~~~~~--~~~~~~~~----~~~~~~-~~~~~---~~~~~  265 (294)
T PHA02882        200 AGLDA-HNGACVTRRGDLES--LGYCMLKWAGIKLPW-KGFGHNGN--LIHAAKCD----FIKRLH-EGKIK---IKNAN  265 (294)
T ss_pred             cCHHH-hCCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CccccchH--HHHHhHHH----HHHHhh-hhhhc---cCCCC
Confidence            57888 77888999999999  999999999999999 54422210  00000000    011111 11111   12346


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+.+++..|+..+|++||++.++++
T Consensus       266 ~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        266 KFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            88899999999999999999999864

>KOG0612|consensus

Probab=99.17  E-value=2e-11  Score=99.11  Aligned_cols=93  Identities=19%  Similarity=0.391  Sum_probs=67.7

Q ss_pred             CCCcccc---CC-CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcch
Q psy9738           1 MAPEGGH---HR-KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKE   75 (133)
Q Consensus         1 maPE~~~---~~-~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   75 (133)
                      ++||++-   .+ +.|+..+|.||  +|+.+|||+.|..|| +.++-..               ....|..-+ ...++.
T Consensus       243 ISPEvLqs~~~~~g~yG~ecDwWS--lGV~~YEMlyG~TPF-Yadslve---------------TY~KIm~hk~~l~FP~  304 (1317)
T KOG0612|consen  243 ISPEVLQSQGDGKGEYGRECDWWS--LGVFMYEMLYGETPF-YADSLVE---------------TYGKIMNHKESLSFPD  304 (1317)
T ss_pred             cCHHHHHhhcCCccccCCccchhh--hHHHHHHHHcCCCcc-hHHHHHH---------------HHHHHhchhhhcCCCc
Confidence            4788832   23 67999999999  999999999999999 7654332               222222111 133432


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCC---HHHHhcCccccc
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRAS---ASLLLKHPFLKI  112 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s---~~ell~h~~~~~  112 (133)
                      ...++..+++||.+.+.- |+.|.+   ++++..||||.+
T Consensus       305 ~~~VSeeakdLI~~ll~~-~e~RLgrngiedik~HpFF~g  343 (1317)
T KOG0612|consen  305 ETDVSEEAKDLIEALLCD-REVRLGRNGIEDIKNHPFFEG  343 (1317)
T ss_pred             ccccCHHHHHHHHHHhcC-hhhhcccccHHHHHhCccccC
Confidence            356899999999987765 778877   999999999976

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.17  E-value=3.4e-11  Score=86.86  Aligned_cols=85  Identities=12%  Similarity=0.160  Sum_probs=60.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      |+||+ +.+..++.++|+||  +|++++++++ |..|| .+... .               .......... ..+.+...
T Consensus       178 ~~PE~-~~~~~~~~~~Diws--lG~~l~el~t~g~~p~-~~~~~-~---------------~~~~~~~~~~-~~~~~~~~  236 (303)
T cd05110         178 MALEC-IHYRKFTHQSDVWS--YGVTIWELMTFGGKPY-DGIPT-R---------------EIPDLLEKGE-RLPQPPIC  236 (303)
T ss_pred             CCHHH-hccCCCChHHHHHH--HHHHHHHHHhCCCCCC-CCCCH-H---------------HHHHHHHCCC-CCCCCCCC
Confidence            57888 77778889999999  9999999986 88888 43321 1               1111221111 11113345


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++..|+..+|+.||++.+++.
T Consensus       237 ~~~~~~li~~c~~~~p~~Rp~~~~l~~  263 (303)
T cd05110         237 TIDVYMVMVKCWMIDADSRPKFKELAA  263 (303)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            678899999999999999999999764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.16  E-value=5.3e-11  Score=84.92  Aligned_cols=100  Identities=10%  Similarity=0.115  Sum_probs=60.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|+++++++++..|. ............+......................  +...+
T Consensus       179 ~apE~-~~~~~~~~~~Di~s--lG~il~ellt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  252 (284)
T cd05079         179 YAPEC-LIQSKFYIASDVWS--FGVTLYELLTYCDSE-SSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPR--PPNCP  252 (284)
T ss_pred             cCHHH-hccCCCCccccchh--hhhhhhhhhcCCCCC-ccccchhhhhcccccccccHHHHHHHHHcCccCCC--CCCCC
Confidence            57898 66677888999999  999999999987655 22110000000000000000001111111111222  34567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+.+|+.+||+.+|.+||++.++++
T Consensus       253 ~~~~~li~~~l~~~p~~Rpt~~~il~  278 (284)
T cd05079         253 EEVYQLMRKCWEFQPSKRTTFQNLIE  278 (284)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHH
Confidence            89999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.16  E-value=4.6e-11  Score=86.10  Aligned_cols=91  Identities=13%  Similarity=0.127  Sum_probs=58.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh--CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE--GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      ||||+ +....++.++|+||  +|++++++++  +..|| .+.+...        .+........  ..........+..
T Consensus       207 ~aPE~-~~~~~~~~~~Dv~s--lG~~l~el~~~~~~~p~-~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~~~~  272 (304)
T cd05096         207 MAWEC-ILMGKFTTASDVWA--FGVTLWEILMLCKEQPY-GELTDEQ--------VIENAGEFFR--DQGRQVYLFRPPP  272 (304)
T ss_pred             cCHHH-HhcCCCCchhhhHH--HHHHHHHHHHccCCCCC-CcCCHHH--------HHHHHHHHhh--hccccccccCCCC
Confidence            68998 77778999999999  9999999986  45666 3322111        0000000000  0001111111234


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      .+..+.+++.+|+..+|.+|||+.++.
T Consensus       273 ~~~~~~~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         273 CPQGLYELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             CCHHHHHHHHHHccCCchhCcCHHHHH
Confidence            578899999999999999999999984

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG1989|consensus

Probab=99.16  E-value=2.7e-11  Score=95.74  Aligned_cols=82  Identities=16%  Similarity=0.184  Sum_probs=63.8

Q ss_pred             CCcccc---CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           2 APEGGH---HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         2 aPE~~~---~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      +||+ +   .+..++.++|||+  +||++|.+++...|| .....+.                    +....+.++....
T Consensus       223 sPEM-IDlysg~pI~eKsDIWA--LGclLYkLCy~t~PF-e~sg~la--------------------Ilng~Y~~P~~p~  278 (738)
T KOG1989|consen  223 SPEM-IDLYSGLPIGEKSDIWA--LGCLLYKLCYFTTPF-EESGKLA--------------------ILNGNYSFPPFPN  278 (738)
T ss_pred             ChHH-HhhhcCCCCcchhHHHH--HHHHHHHHHHhCCCc-CcCccee--------------------EEeccccCCCCcc
Confidence            6888 5   4667899999999  999999999999999 3322322                    2223344443456


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      .+..+.+||..||+.+|+.||++-+++.+
T Consensus       279 ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  279 YSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             HHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence            88999999999999999999999988743

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.16  E-value=6.1e-11  Score=89.23  Aligned_cols=85  Identities=19%  Similarity=0.276  Sum_probs=62.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-CCCCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   78 (133)
                      |+||. +....++.++|+|+  +|++++++++ |..|| .......               ....... ...+..  +..
T Consensus       308 ~aPE~-~~~~~~~~~~Dvws--lGvil~e~l~~g~~P~-~~~~~~~---------------~~~~~~~~~~~~~~--p~~  366 (401)
T cd05107         308 MAPES-IFNNLYTTLSDVWS--FGILLWEIFTLGGTPY-PELPMNE---------------QFYNAIKRGYRMAK--PAH  366 (401)
T ss_pred             eChHH-hcCCCCCcHhHHHH--HHHHHHHHHHcCCCCC-CCCCchH---------------HHHHHHHcCCCCCC--CCC
Confidence            57898 66777889999999  9999999997 88888 4322211               1222221 212222  345


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      .+..+.+++.+|+..+|..||++.+++.
T Consensus       367 ~~~~l~~li~~cl~~~P~~RPs~~ell~  394 (401)
T cd05107         367 ASDEIYEIMQKCWEEKFEIRPDFSQLVH  394 (401)
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            6789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.15  E-value=7.7e-11  Score=83.96  Aligned_cols=85  Identities=22%  Similarity=0.327  Sum_probs=58.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||.+.....++.++|+||  +|+++++++ .|..|| .......               .. .... ....+  +...
T Consensus       187 ~aPe~~~~~~~~~~~~Dv~s--lG~~l~el~~~g~~p~-~~~~~~~---------------~~-~~~~-~~~~~--~~~~  244 (274)
T cd05076         187 IAPECVPGGNSLSTAADKWS--FGTTLLEICFDGEVPL-KERTPSE---------------KE-RFYE-KKHRL--PEPS  244 (274)
T ss_pred             cCchhhcCCCCCCcHHHHHH--HHHHHHHHHhCCCCCc-cccChHH---------------HH-HHHH-hccCC--CCCC
Confidence            58998334466889999999  999999984 788888 4432221               11 1111 11112  1224


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      .+.+.+++.+||..+|+.||++.+++++
T Consensus       245 ~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         245 CKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             ChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            5678999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.15  E-value=7.2e-11  Score=96.96  Aligned_cols=95  Identities=17%  Similarity=0.296  Sum_probs=60.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHH------HhhhCC-CCCc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALY------LIATNK-KPEI   73 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~   73 (133)
                      ||||+ +.+..|+.++||||  +|++++|+++|+.|| .........       +..+.+...      ...... ....
T Consensus       845 ~aPE~-~~~~~~~~~sDv~S--~Gvvl~el~tg~~p~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  913 (968)
T PLN00113        845 VAPET-RETKDITEKSDIYG--FGLILIELLTGKSPA-DAEFGVHGS-------IVEWARYCYSDCHLDMWIDPSIRGDV  913 (968)
T ss_pred             cCccc-ccCCCCCcccchhh--HHHHHHHHHhCCCCC-CcccCCCCc-------HHHHHHHhcCccchhheeCccccCCC
Confidence            79999 77888999999999  999999999999999 432211111       111100000      000000 0000


Q ss_pred             chhhhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          74 KEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        74 ~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      .........+.+++.+|+..+|++||++.++++
T Consensus       914 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~  946 (968)
T PLN00113        914 SVNQNEIVEVMNLALHCTATDPTARPCANDVLK  946 (968)
T ss_pred             CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHH
Confidence            111223346678899999999999999999874

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.14  E-value=8.1e-11  Score=84.47  Aligned_cols=87  Identities=9%  Similarity=0.130  Sum_probs=59.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh--CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhh----h-CCCCCc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE--GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIA----T-NKKPEI   73 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~   73 (133)
                      +|||+ .....++.++|+||  +|++++++++  |..|| .......               ......    . ......
T Consensus       198 ~aPE~-~~~~~~~~~~DvwS--lG~~l~el~~~~~~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~  258 (295)
T cd05097         198 MAWES-ILLGKFTTASDVWA--FGVTLWEMFTLCKEQPY-SLLSDEQ---------------VIENTGEFFRNQGRQIYL  258 (295)
T ss_pred             cChhh-hccCCcCchhhHHH--HHHHHHHHHHcCCCCCC-cccChHH---------------HHHHHHHhhhhccccccC
Confidence            57898 66777899999999  9999999987  55677 3222111               111110    0 011111


Q ss_pred             chhhhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          74 KEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        74 ~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+...+..+.+++.+|+..+|.+||+++++++
T Consensus       259 ~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         259 SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            113346788999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.14  E-value=1.1e-10  Score=82.54  Aligned_cols=85  Identities=18%  Similarity=0.267  Sum_probs=55.5

Q ss_pred             CCCccccCCC-------CCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCC
Q psy9738           1 MAPEGGHHRK-------QYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPE   72 (133)
Q Consensus         1 maPE~~~~~~-------~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (133)
                      ||||+ +...       .++.++|+||  +|++++++++ |..|| .......               ............
T Consensus       169 ~aPE~-~~~~~~~~~~~~~~~~~Diws--lG~~l~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~  229 (269)
T cd05087         169 IAPEL-VDEVHGNLLVVDQTKESNVWS--LGVTIWELFELGSQPY-RHLSDEQ---------------VLTYTVREQQLK  229 (269)
T ss_pred             cCHhH-hccccccccccCCCccchhHH--HHHHHHHHHhCCCCCC-CCCChHH---------------HHHHHhhcccCC
Confidence            57888 5321       3577899999  9999999996 99999 4332211               111111111111


Q ss_pred             cch---hhhhcHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          73 IKE---KEKLSQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        73 ~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +..   ....+..+.+++.+|+ .+|++||++++++
T Consensus       230 ~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~  264 (269)
T cd05087         230 LPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVH  264 (269)
T ss_pred             CCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHH
Confidence            111   1235677889999998 6899999999986

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0695|consensus

Probab=99.13  E-value=8.6e-11  Score=85.73  Aligned_cols=98  Identities=21%  Similarity=0.311  Sum_probs=74.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..|+.++|.|+  +|+++++|+.|+.||+.......+.+.-.|         +..++.++...+  |+.++
T Consensus       418 iapei-lrgeeygfsvdwwa--lgvlmfemmagrspfdivgm~n~d~ntedy---------lfqvilekqiri--prsls  483 (593)
T KOG0695|consen  418 IAPEI-LRGEEYGFSVDWWA--LGVLMFEMMAGRSPFDIVGMDNPDMNTEDY---------LFQVILEKQIRI--PRSLS  483 (593)
T ss_pred             cchhh-hcccccCceehHHH--HHHHHHHHHcCCCCcceecCCCcccchhHH---------HHHHHhhhcccc--cceee
Confidence            58999 99999999999999  999999999999999622222333344333         223334443444  66778


Q ss_pred             HHHHHHHHHHhhhcccccCC------HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS------ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s------~~ell~h~~~~~  112 (133)
                      ..+...++..|..||..|..      ..++..|+||+.
T Consensus       484 vkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~  521 (593)
T KOG0695|consen  484 VKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRS  521 (593)
T ss_pred             hhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence            88889999999999999963      577889999973

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.10  E-value=1.4e-10  Score=82.29  Aligned_cols=100  Identities=12%  Similarity=0.114  Sum_probs=61.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ++||. .....++.++|+||  +|+++++|++|..|+ ............+...... ........... .....+...+
T Consensus       179 ~~Pe~-~~~~~~~~~~Di~s--lG~~l~el~tg~~p~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~  252 (284)
T cd05038         179 YAPEC-LRTSKFSSASDVWS--FGVTLYELFTYGDPS-QSPPAEFLRMIGIAQGQMI-VTRLLELLKEG-ERLPRPPSCP  252 (284)
T ss_pred             cCcHH-HccCCCCcccchHH--HhhhhheeeccCCCc-ccccchhcccccccccccc-HHHHHHHHHcC-CcCCCCccCC
Confidence            46888 66677888999999  999999999999888 4321111000000000000 00111111111 1111133456


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+.+++.+||..+|.+||++.++++
T Consensus       253 ~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         253 DEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHH
Confidence            78999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.09  E-value=3e-10  Score=79.56  Aligned_cols=83  Identities=16%  Similarity=0.245  Sum_probs=56.9

Q ss_pred             CCCccccCCC--CCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhh
Q psy9738           1 MAPEGGHHRK--QYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKE   77 (133)
Q Consensus         1 maPE~~~~~~--~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (133)
                      +|||+ +...  .++.++|+||  +|++++++++ |..|+ .......               .............    
T Consensus       171 ~aPE~-~~~~~~~~~~~~Di~s--lG~~~~~l~~~~~~p~-~~~~~~~---------------~~~~~~~~~~~~~----  227 (259)
T cd05037         171 IAPEC-IRNGQASLTIAADKWS--FGTTLLEICSNGEEPL-STLSSSE---------------KERFYQDQHRLPM----  227 (259)
T ss_pred             cChhh-hcCCCCCcchhhHHHH--HHHHHHHHHhCCCCCc-ccCCchh---------------HHHHHhcCCCCCC----
Confidence            58998 5544  7888999999  9999999998 56777 3332211               1111111111111    


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      .....+.+++.+||..+|.+||++.++++
T Consensus       228 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         228 PDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence            12378889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.08  E-value=1.5e-10  Score=94.11  Aligned_cols=86  Identities=14%  Similarity=0.136  Sum_probs=60.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .......               .........+..+.....++
T Consensus       198 mAPE~-l~g~~~S~kSDIWS--LGVILyELLTG~~PF-~~~~~~k---------------i~~~~~i~~P~~~~p~~~iP  258 (932)
T PRK13184        198 MAPER-LLGVPASESTDIYA--LGVILYQMLTLSFPY-RRKKGRK---------------ISYRDVILSPIEVAPYREIP  258 (932)
T ss_pred             CCHHH-hcCCCCCcHhHHHH--HHHHHHHHHHCCCCC-CCcchhh---------------hhhhhhccChhhccccccCC
Confidence            68999 77888899999999  999999999999999 5432211               11111111111221123567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +.+.+++.+||..||.+|++..+.+
T Consensus       259 ~~L~~LI~rcL~~DP~kR~ss~eeL  283 (932)
T PRK13184        259 PFLSQIAMKALAVDPAERYSSVQEL  283 (932)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHH
Confidence            8899999999999999998765543

>KOG0193|consensus

Probab=99.08  E-value=8.4e-11  Score=90.48  Aligned_cols=87  Identities=17%  Similarity=0.397  Sum_probs=63.4

Q ss_pred             CCCcccc---CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcch-
Q psy9738           1 MAPEGGH---HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKE-   75 (133)
Q Consensus         1 maPE~~~---~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-   75 (133)
                      ||||+ +   ....|+..+|+|+  ||+++|||++|..|| ...+..+               .++.+.... .+++.. 
T Consensus       557 mAPEv-IRmqd~nPfS~qSDVYa--FGiV~YELltg~lPy-si~~~dq---------------IifmVGrG~l~pd~s~~  617 (678)
T KOG0193|consen  557 MAPEV-IRMQDDNPFSFQSDVYA--FGIVWYELLTGELPY-SIQNRDQ---------------IIFMVGRGYLMPDLSKI  617 (678)
T ss_pred             hcHHH-HhhcccCCCCcccchhh--hhHHHHHHHhCcCCc-CCCChhh---------------eEEEecccccCccchhh
Confidence            89999 6   3457899999999  999999999999999 5333333               222222221 122211 


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ....+.++++|+..|+.++++.||.+.++|.
T Consensus       618 ~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  618 RSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             hccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            2345679999999999999999999998874

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.07  E-value=2e-10  Score=81.16  Aligned_cols=86  Identities=16%  Similarity=0.244  Sum_probs=56.6

Q ss_pred             CCCccccC-------CCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCC
Q psy9738           1 MAPEGGHH-------RKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPE   72 (133)
Q Consensus         1 maPE~~~~-------~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (133)
                      +|||+ +.       ...++.++|+||  +|++++++++ |..|| .......               ....+.......
T Consensus       169 ~aPE~-~~~~~~~~~~~~~~~~~Diws--lG~~l~el~~~~~~p~-~~~~~~~---------------~~~~~~~~~~~~  229 (269)
T cd05042         169 LAPEL-VEIRGQDLLPKDQTKKSNIWS--LGVTMWELFTAADQPY-PDLSDEQ---------------VLKQVVREQDIK  229 (269)
T ss_pred             cCHHH-HhhccccccccccchhhHHHH--HHHHHHHHHhCCCCCC-CcCCHHH---------------HHHHHhhccCcc
Confidence            57887 42       235677899999  9999999998 77788 4332211               222222222211


Q ss_pred             cc---hhhhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          73 IK---EKEKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        73 ~~---~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++   .+...+....+++..|+ .||++||+++++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         230 LPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             CCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            11   12356788888988888 59999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG0586|consensus

Probab=99.07  E-value=3.4e-11  Score=92.45  Aligned_cols=93  Identities=22%  Similarity=0.255  Sum_probs=72.1

Q ss_pred             CCccccCCCCCC-CccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           2 APEGGHHRKQYG-PKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         2 aPE~~~~~~~~~-~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      |||+ ..+..|+ +.+|+|+  +|+++|.++.|..|| .+.+-..                +..........+  +..++
T Consensus       222 aPEl-~~g~~y~gpe~D~Ws--lgvvly~LV~GsLPF-DG~~lk~----------------Lr~rvl~gk~rI--p~~ms  279 (596)
T KOG0586|consen  222 APEL-FNGKKYDGPEVDIWS--LGVVLYALVEGSLPF-DGQNLKE----------------LRPRVLRGKYRI--PFYMS  279 (596)
T ss_pred             ChHh-hcCcccCCcceehhh--hhhhheeeeeccccc-CCccccc----------------ccchheeeeecc--cceee
Confidence            7899 7777785 5799999  999999999999999 4433222                222222233334  55678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  116 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~  116 (133)
                      .++.++|+++|.++|.+|+++++++.|.|+......
T Consensus       280 ~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  280 CDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             chhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence            999999999999999999999999999999764443

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.06  E-value=2.2e-10  Score=81.61  Aligned_cols=100  Identities=10%  Similarity=0.056  Sum_probs=60.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCC-CcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLR-PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..++ ....... .............. .+....... ...+.+...
T Consensus       178 ~aPE~-~~~~~~~~~~Di~s--lG~~l~el~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~  251 (284)
T cd05081         178 YAPES-LTESKFSVASDVWS--FGVVLYELFTYSDKS-CSPPAEFMRMMGNDKQGQMIVY-HLIELLKNN-GRLPAPPGC  251 (284)
T ss_pred             eCHHH-hccCCcChHHHHHH--HHHHHHHHhhcCCcC-CCcchhhhhhcccccccccchH-HHHHHHhcC-CcCCCCCCC
Confidence            47898 67778889999999  999999999987665 2211100 00000000000000 011111111 111113456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+|+..+|++|||+.+++.
T Consensus       252 ~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         252 PAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG0608|consensus

Probab=99.05  E-value=1.6e-10  Score=89.91  Aligned_cols=95  Identities=23%  Similarity=0.385  Sum_probs=69.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +...+|+..+|.|+  +|+++|+|+.|++|| ....+...++              ..+.......+....+++
T Consensus       838 iapev-l~r~g~~q~cdwws--~gvil~em~~g~~pf-~~~tp~~tq~--------------kv~nw~~~l~~~~~~~ls  899 (1034)
T KOG0608|consen  838 IAPEV-LARTGYTQLCDWWS--VGVILYEMLVGQPPF-LADTPGETQY--------------KVINWRNFLHIPYQGNLS  899 (1034)
T ss_pred             cChHH-hcccCccccchhhH--hhHHHHHHhhCCCCc-cCCCCCccee--------------eeeehhhccccccccccC
Confidence            69999 88899999999999  999999999999999 6665554111              111112223343356789


Q ss_pred             HHHHHHHHHHhhhcccccC---CHHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRA---SASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~---s~~ell~h~~~~~~~  114 (133)
                      +++.++|.++. .+++.|.   .++++..||||++-.
T Consensus       900 ~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgID  935 (1034)
T KOG0608|consen  900 KEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGID  935 (1034)
T ss_pred             HHHHHHHHHHh-cChhhhhcccchhhhhcCccccccc
Confidence            99999998743 4577776   467799999998643

>KOG1027|consensus

Probab=99.04  E-value=4.4e-11  Score=94.64  Aligned_cols=88  Identities=20%  Similarity=0.307  Sum_probs=63.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhC-CCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC--CCcchhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEG-EPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK--PEIKEKE   77 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~   77 (133)
                      +|||+ +....-..++||+|  +||++|..++| ..||  +++..+                ...|.....  ..+.  .
T Consensus       681 ~APE~-L~~~~~~~avDiFs--lGCvfyYvltgG~HpF--Gd~~~R----------------~~NIl~~~~~L~~L~--~  737 (903)
T KOG1027|consen  681 QAPEQ-LREDRKTQAVDIFS--LGCVFYYVLTGGSHPF--GDSLER----------------QANILTGNYTLVHLE--P  737 (903)
T ss_pred             cCHHH-HhccccCcccchhh--cCceEEEEecCCccCC--CchHHh----------------hhhhhcCccceeeec--c
Confidence            58999 66666677999999  99999998876 7888  554332                223332221  1111  1


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      ....++.++|.+|+.++|..||++.++|.||+|=
T Consensus       738 ~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW  771 (903)
T KOG1027|consen  738 LPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW  771 (903)
T ss_pred             CchHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence            1112889999999999999999999999999984

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.01  E-value=8.7e-10  Score=78.11  Aligned_cols=86  Identities=15%  Similarity=0.227  Sum_probs=54.6

Q ss_pred             CCCccccCC-------CCCCCccccchhHHHHHHHHHHhC-CCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCC
Q psy9738           1 MAPEGGHHR-------KQYGPKVGYFGHWVSMAYLKMIEG-EPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPE   72 (133)
Q Consensus         1 maPE~~~~~-------~~~~~~~Diws~~~g~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (133)
                      +|||+ +..       ..++.++|+||  +|+++++|+++ ..|| .......               ....+.......
T Consensus       168 ~aPE~-~~~~~~~~~~~~~~~~~Diws--lG~~l~el~~~~~~p~-~~~~~~~---------------~~~~~~~~~~~~  228 (268)
T cd05086         168 LAPEL-VGEFHGGLITAEQTKPSNVWA--LGVTLWELFENAAQPY-SHLSDRE---------------VLNHVIKDQQVK  228 (268)
T ss_pred             cCchh-cccccCccccCCCCCcchhHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHhhcccc
Confidence            57888 422       23567899999  99999999864 5677 3322211               122222221111


Q ss_pred             cch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          73 IKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        73 ~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..   ....+..+.+++..|+ .+|.+||+++++++
T Consensus       229 ~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         229 LFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             cCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            111   2336778889999998 67999999999863

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0200|consensus

Probab=99.00  E-value=7.1e-10  Score=87.49  Aligned_cols=85  Identities=19%  Similarity=0.314  Sum_probs=63.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||. +....|+.++|+||  +|+++||++ .|..|| .+-....               .+...... ...+..|...
T Consensus       488 mApEs-l~~~~ft~kSDVWS--fGI~L~EifsLG~~PY-p~~~~~~---------------~l~~~l~~-G~r~~~P~~c  547 (609)
T KOG0200|consen  488 MAPES-LFDRVFTSKSDVWS--FGILLWEIFTLGGTPY-PGIPPTE---------------ELLEFLKE-GNRMEQPEHC  547 (609)
T ss_pred             cCHHH-hccCcccccchhhH--HHHHHHHHhhCCCCCC-CCCCcHH---------------HHHHHHhc-CCCCCCCCCC
Confidence            89999 87799999999999  999999987 566788 4421111               12222222 2333346667


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +.++.++++.|+..+|++||+..++.
T Consensus       548 ~~eiY~iM~~CW~~~p~~RP~F~~~~  573 (609)
T KOG0200|consen  548 SDEIYDLMKSCWNADPEDRPTFSECV  573 (609)
T ss_pred             CHHHHHHHHHHhCCCcccCCCHHHHH
Confidence            89999999999999999999998875

>KOG1024|consensus

Probab=98.99  E-value=3.9e-10  Score=83.53  Aligned_cols=84  Identities=14%  Similarity=0.209  Sum_probs=66.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      |++|. +....|+..+|+|+  ||+++||++ .|+.|+ ..-++.+                .+...+. ...+.+|.+.
T Consensus       465 MslEa-l~n~~yssasDvWs--fGVllWELmtlg~~Py-aeIDPfE----------------m~~ylkd-GyRlaQP~NC  523 (563)
T KOG1024|consen  465 MSLEA-LQNSHYSSASDVWS--FGVLLWELMTLGKLPY-AEIDPFE----------------MEHYLKD-GYRLAQPFNC  523 (563)
T ss_pred             cCHHH-HhhhhhcchhhhHH--HHHHHHHHHhcCCCCc-cccCHHH----------------HHHHHhc-cceecCCCCC
Confidence            78888 88889999999999  999999987 677888 4333332                3333333 3455557788


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +.++...+..|+..+|+.||+.+++.
T Consensus       524 PDeLf~vMacCWallpeeRPsf~Qlv  549 (563)
T KOG1024|consen  524 PDELFTVMACCWALLPEERPSFSQLV  549 (563)
T ss_pred             cHHHHHHHHHHHhcCcccCCCHHHHH
Confidence            99999999999999999999999975

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.98  E-value=2e-09  Score=83.22  Aligned_cols=90  Identities=14%  Similarity=0.120  Sum_probs=55.7

Q ss_pred             ccccchhHHHHHHHHHHhCCC-CCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhcHHHHHHHHHHhhh
Q psy9738          15 KVGYFGHWVSMAYLKMIEGEP-PLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEE   93 (133)
Q Consensus        15 ~~Diws~~~g~~~~~~~~g~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~   93 (133)
                      ..|+||  +||++++|++|.. |+ .+.......+. .+.+...    ...........+......+....+|+.++|..
T Consensus       412 ~~DvwS--lGvil~em~~~~l~p~-~~~~~f~~~~~-~~~~~~~----~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~  483 (507)
T PLN03224        412 LFDSYT--AGVLLMQMCVPELRPV-ANIRLFNTELR-QYDNDLN----RWRMYKGQKYDFSLLDRNKEAGWDLACKLITK  483 (507)
T ss_pred             ccchhh--HHHHHHHHHhCCCCCc-cchhhhhhHHh-hccchHH----HHHhhcccCCCcccccccChHHHHHHHHHhcc
Confidence            479999  9999999999874 55 32111110000 0000000    01111222233333345688999999999997


Q ss_pred             cc---cccCCHHHHhcCccccc
Q psy9738          94 EV---ETRASASLLLKHPFLKI  112 (133)
Q Consensus        94 ~p---~~R~s~~ell~h~~~~~  112 (133)
                      ++   .+|+|++++|.||||..
T Consensus       484 ~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        484 RDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             CCCCcccCCCHHHHhCCCCcCC
Confidence            66   68999999999999963

>KOG0611|consensus

Probab=98.95  E-value=1.4e-09  Score=81.09  Aligned_cols=87  Identities=15%  Similarity=0.182  Sum_probs=67.3

Q ss_pred             CCccccCCCCCC-CccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           2 APEGGHHRKQYG-PKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         2 aPE~~~~~~~~~-~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +||+ +.+..|. +.+|.||  +|+++|.++.|.-|| .+.+...               .. ..++.+.+.-  | ..+
T Consensus       220 SPEI-vNG~PY~GPEVDsWs--LGvLLYtLVyGtMPF-DG~Dhk~---------------lv-rQIs~GaYrE--P-~~P  276 (668)
T KOG0611|consen  220 SPEI-VNGTPYKGPEVDSWS--LGVLLYTLVYGTMPF-DGRDHKR---------------LV-RQISRGAYRE--P-ETP  276 (668)
T ss_pred             Cccc-cCCCCCCCCccchhh--HHHHHHHHhhccccc-CCchHHH---------------HH-HHhhcccccC--C-CCC
Confidence            6899 8899984 6799999  999999999999999 5544332               22 2333333322  2 235


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      .++.-+|+.||..+|.+|.|+.++..|=|++
T Consensus       277 SdA~gLIRwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  277 SDASGLIRWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             chHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence            6778899999999999999999999998886

>KOG1167|consensus

Probab=98.95  E-value=7.5e-10  Score=81.94  Aligned_cols=111  Identities=22%  Similarity=0.368  Sum_probs=67.2

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhH----HhhHHH-----------------
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLF----ILSCRQ-----------------   60 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~-----------------   60 (133)
                      |||++.....-++++|+||  .|+++..++++..||....+...-...+...+    ++.+-.                 
T Consensus       245 aPEvL~k~~~QttaiDiws--~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~  322 (418)
T KOG1167|consen  245 APEVLFRCPRQTTAIDIWS--AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIP  322 (418)
T ss_pred             chHHHhhccCcCCccceee--ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccH
Confidence            6899666677788999999  99999999999999932222111000000000    000000                 


Q ss_pred             -HH--HH------hhhCCCC---CcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          61 -AL--YL------IATNKKP---EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        61 -~~--~~------~~~~~~~---~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                       ..  +.      +.....+   ........+..+.+|+++||..||.+|.|++++|.||||....
T Consensus       323 e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~  388 (418)
T KOG1167|consen  323 ELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD  388 (418)
T ss_pred             HHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence             00  00      0000000   0000123456788999999999999999999999999998544

>KOG4257|consensus

Probab=98.94  E-value=7.4e-10  Score=86.16  Aligned_cols=84  Identities=12%  Similarity=0.207  Sum_probs=68.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||- +...+++..+|+|-  ||+-+||++ .|..|| .+-....               .+..+..+...+.  |...
T Consensus       559 maPES-INfRrFTtASDVWM--FgVCmWEIl~lGvkPf-qgvkNsD---------------VI~~iEnGeRlP~--P~nC  617 (974)
T KOG4257|consen  559 MAPES-INFRRFTTASDVWM--FGVCMWEILSLGVKPF-QGVKNSD---------------VIGHIENGERLPC--PPNC  617 (974)
T ss_pred             cCccc-cchhcccchhhHHH--HHHHHHHHHHhcCCcc-ccccccc---------------eEEEecCCCCCCC--CCCC
Confidence            89999 99999999999999  999999976 888999 6654444               3334444444444  6788


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      ++.+..++.+|+.++|.+||.+.++.
T Consensus       618 Pp~LYslmskcWayeP~kRPrftei~  643 (974)
T KOG4257|consen  618 PPALYSLMSKCWAYEPSKRPRFTEIK  643 (974)
T ss_pred             ChHHHHHHHHHhccCcccCCcHHHHH
Confidence            99999999999999999999988864

>KOG0662|consensus

Probab=98.91  E-value=3.2e-09  Score=71.65  Aligned_cols=95  Identities=20%  Similarity=0.246  Sum_probs=64.2

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh---CC--------
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT---NK--------   69 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------   69 (133)
                      +|.+++..+-|+.+.|+||  -||++.|+. .|++.| .+.+...               ++..+..   .+        
T Consensus       169 ppdvlfgakly~tsidmws--agcifaelanagrplf-pg~dvdd---------------qlkrif~~lg~p~ed~wps~  230 (292)
T KOG0662|consen  169 PPDVLFGAKLYSTSIDMWS--AGCIFAELANAGRPLF-PGNDVDD---------------QLKRIFRLLGTPTEDQWPSM  230 (292)
T ss_pred             CcceeeeeehhccchHhhh--cchHHHHHhhcCCCCC-CCCcHHH---------------HHHHHHHHhCCCccccCCcc
Confidence            4666556677999999999  999999997 566666 5443222               1111111   00        


Q ss_pred             --------CCCcc----h---hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          70 --------KPEIK----E---KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        70 --------~~~~~----~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                              .|..+    .   -+++....++++++.|..+|.+|.+++.+|+||||....
T Consensus       231 t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s  290 (292)
T KOG0662|consen  231 TKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS  290 (292)
T ss_pred             ccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence                    00000    0   123445678999999999999999999999999998654

>KOG0576|consensus

Probab=98.89  E-value=1.3e-09  Score=85.09  Aligned_cols=104  Identities=29%  Similarity=0.554  Sum_probs=82.1

Q ss_pred             CCCcccc---CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh--CCCCCcch
Q psy9738           1 MAPEGGH---HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT--NKKPEIKE   75 (133)
Q Consensus         1 maPE~~~---~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~   75 (133)
                      ||||+ .   ..++|+..+|+|+  +|+...++..-++|. ...++.+               .++...+  ..++.+.+
T Consensus       179 mapEv-aaverkggynqlcdiwa--~gitAiel~eLqppl-fdlhpmr---------------~l~LmTkS~~qpp~lkD  239 (829)
T KOG0576|consen  179 MAPEV-AAVERKGGYNQLCDIWA--LGITAIELGELQPPL-FDLHPMR---------------ALFLMTKSGFQPPTLKD  239 (829)
T ss_pred             cchhH-HHHHhcccccccccccc--cccchhhhhhcCCcc-cccchHH---------------HHHHhhccCCCCCcccC
Confidence            78998 5   3568999999999  999999998888888 6666665               4444333  34577777


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHH
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLI  123 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~  123 (133)
                      +.+.++.+.+|++.+|..+|.+||+++.+|.|||+....+..-..+++
T Consensus       240 k~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLL  287 (829)
T KOG0576|consen  240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELL  287 (829)
T ss_pred             CccchHHHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHH
Confidence            888999999999999999999999999999999998764333333333

>KOG0196|consensus

Probab=98.89  E-value=2.8e-10  Score=89.98  Aligned_cols=84  Identities=12%  Similarity=0.302  Sum_probs=67.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      .|||. +....++.++|+||  +|+++||.+ .|..|| +....-.               .+..+.  ..+.++.|...
T Consensus       801 TAPEA-Ia~RKFTsASDVWS--yGIVmWEVmSyGERPY-WdmSNQd---------------VIkaIe--~gyRLPpPmDC  859 (996)
T KOG0196|consen  801 TAPEA-IAYRKFTSASDVWS--YGIVMWEVMSYGERPY-WDMSNQD---------------VIKAIE--QGYRLPPPMDC  859 (996)
T ss_pred             cChhH-hhhcccCchhhccc--cceEEEEecccCCCcc-cccchHH---------------HHHHHH--hccCCCCCCCC
Confidence            38999 88999999999999  999999965 899999 5443222               343333  33556557788


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +..+..|+..|+++|...||++.+++
T Consensus       860 P~aL~qLMldCWqkdR~~RP~F~qiV  885 (996)
T KOG0196|consen  860 PAALYQLMLDCWQKDRNRRPKFAQIV  885 (996)
T ss_pred             cHHHHHHHHHHHHHHhhcCCCHHHHH
Confidence            99999999999999999999999975

>KOG0199|consensus

Probab=98.87  E-value=1.4e-09  Score=85.42  Aligned_cols=88  Identities=16%  Similarity=0.238  Sum_probs=69.0

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      |||. +....++.++|+|.  +|+.+|||+ .|+.|| .+....+               .+..+.  ....+..+...+
T Consensus       283 aPEs-Lrh~kFShaSDvWm--yGVTiWEMFtyGEePW-~G~~g~q---------------IL~~iD--~~erLpRPk~cs  341 (1039)
T KOG0199|consen  283 APES-LRHRKFSHASDVWM--YGVTIWEMFTYGEEPW-VGCRGIQ---------------ILKNID--AGERLPRPKYCS  341 (1039)
T ss_pred             CHhH-hccccccccchhhh--hhhhHHhhhccCCCCC-CCCCHHH---------------HHHhcc--ccccCCCCCCCh
Confidence            7888 88889999999999  999999998 567888 6665544               444443  334455566788


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      .+..+++..|+..+|.+||++..+.+..+.
T Consensus       342 edIY~imk~cWah~paDRptFsair~~~~l  371 (1039)
T KOG0199|consen  342 EDIYQIMKNCWAHNPADRPTFSAIREDLVL  371 (1039)
T ss_pred             HHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence            999999999999999999999887543333

>KOG1035|consensus

Probab=98.84  E-value=5e-09  Score=86.08  Aligned_cols=87  Identities=21%  Similarity=0.303  Sum_probs=59.7

Q ss_pred             CCCccccCCC---CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHH-HHHHhhhCCCCCcchh
Q psy9738           1 MAPEGGHHRK---QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ-ALYLIATNKKPEIKEK   76 (133)
Q Consensus         1 maPE~~~~~~---~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   76 (133)
                      +|||+ +.+.   .|+.++|+||  +|++++||+.   ||  +....+              . .+..+.   ...++.+
T Consensus       782 vAPEl-l~~~~~~~Yn~KiDmYS--LGIVlFEM~y---PF--~TsMER--------------a~iL~~LR---~g~iP~~  836 (1351)
T KOG1035|consen  782 VAPEL-LSDTSSNKYNSKIDMYS--LGIVLFEMLY---PF--GTSMER--------------ASILTNLR---KGSIPEP  836 (1351)
T ss_pred             ecHHH-hcccccccccchhhhHH--HHHHHHHHhc---cC--CchHHH--------------HHHHHhcc---cCCCCCC
Confidence            58999 5443   5999999999  9999999986   46  222111              0 222222   1222111


Q ss_pred             ----hhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          77 ----EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        77 ----~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                          ...-+.-..+|+.+++.||++||||.|+|.+.|+-.
T Consensus       837 ~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  837 ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP  876 (1351)
T ss_pred             cccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence                111245567999999999999999999999999975

>KOG0664|consensus

Probab=98.82  E-value=4.2e-09  Score=75.18  Aligned_cols=108  Identities=18%  Similarity=0.244  Sum_probs=68.0

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccc-hhhH---HhhHHHH----HHHhhhC--CCC
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLI-PYLF---ILSCRQA----LYLIATN--KKP   71 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~-~~~~---~~~~~~~----~~~~~~~--~~~   71 (133)
                      |||++.....|+..+||||  +||++.|++..+..| ...++.++.-.| .-+.   +..-+..    -..+...  +.|
T Consensus       225 APEiLMGaRhYs~AvDiWS--VGCIFaELLgRrILF-QAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~P  301 (449)
T KOG0664|consen  225 APELLMGARRYTGAVDIWS--VGCIFAELLQRKILF-QAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAP  301 (449)
T ss_pred             cHHHhhcchhhcCccceeh--hhHHHHHHHhhhhhh-hccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCC
Confidence            7999667788999999999  999999999888888 666655421111 1110   0000000    0111111  112


Q ss_pred             Ccc------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          72 EIK------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        72 ~~~------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      +++      .+..-..+..+++.++|.+||..|.+..+.+.|++...
T Consensus       302 s~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e  348 (449)
T KOG0664|consen  302 DTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE  348 (449)
T ss_pred             CccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence            221      11122345667888899999999999999999998753

>KOG0194|consensus

Probab=98.81  E-value=1.2e-09  Score=83.18  Aligned_cols=85  Identities=18%  Similarity=0.262  Sum_probs=64.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||. +...-|+.++|||+  +|+++||+++ |..|| .+.....               ....+.... ..++.+...
T Consensus       329 LAPEt-l~~~~~s~kTDV~s--fGV~~~Eif~~g~~Py-~g~~~~~---------------v~~kI~~~~-~r~~~~~~~  388 (474)
T KOG0194|consen  329 LAPET-LNTGIFSFKTDVWS--FGVLLWEIFENGAEPY-PGMKNYE---------------VKAKIVKNG-YRMPIPSKT  388 (474)
T ss_pred             cChhh-hccCccccccchhh--eeeeEEeeeccCCCCC-CCCCHHH---------------HHHHHHhcC-ccCCCCCCC
Confidence            68999 87789999999999  9999999986 77899 6554332               333342322 222224466


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +.....++.+|+..+|+.|+++.++.
T Consensus       389 p~~~~~~~~~c~~~~p~~R~tm~~i~  414 (474)
T KOG0194|consen  389 PKELAKVMKQCWKKDPEDRPTMSTIK  414 (474)
T ss_pred             HHHHHHHHHHhccCChhhccCHHHHH
Confidence            78888899999999999999998874

>KOG4278|consensus

Probab=98.77  E-value=1.1e-08  Score=79.86  Aligned_cols=83  Identities=16%  Similarity=0.221  Sum_probs=65.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      .|||- +....++.++|+|+  ||+++||+. .|-.|| .+-+ ..               +.+.+. +..+.|..|.-+
T Consensus       433 TAPEs-LAyNtFSiKSDVWA--FGVLLWEIATYGMsPY-PGid-lS---------------qVY~LL-EkgyRM~~PeGC  491 (1157)
T KOG4278|consen  433 TAPES-LAYNTFSIKSDVWA--FGVLLWEIATYGMSPY-PGID-LS---------------QVYGLL-EKGYRMDGPEGC  491 (1157)
T ss_pred             cCccc-ccccccccchhhHH--HHHHHHHHHhcCCCCC-CCcc-HH---------------HHHHHH-hccccccCCCCC
Confidence            37898 88888999999999  999999997 566788 4432 22               333333 334667667778


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHH
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLL  104 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~el  104 (133)
                      ++...+|++.|++..|++||++.|+
T Consensus       492 PpkVYeLMraCW~WsPsDRPsFaei  516 (1157)
T KOG4278|consen  492 PPKVYELMRACWNWSPSDRPSFAEI  516 (1157)
T ss_pred             CHHHHHHHHHHhcCCcccCccHHHH
Confidence            9999999999999999999999987

>KOG0590|consensus

Probab=98.76  E-value=1.2e-09  Score=85.91  Aligned_cols=98  Identities=18%  Similarity=0.238  Sum_probs=69.6

Q ss_pred             CCCccccCCCCCCC-ccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcc-cchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGP-KVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHF-LIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~-~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      +|||+ +.+..|++ .+||||  .|+++..|..|+.|| .......+.+ ...+        .........+..+  ...
T Consensus       491 ~apE~-~~~~~ydpr~vDiwS--~~ii~~~m~~~~~~W-k~a~~~~~~~~~~~~--------~~~~~~~~~~~~~--~~~  556 (601)
T KOG0590|consen  491 LAPEV-LTGKEYDPRAVDVWS--CGIIYICMILGRFPW-KVAKKSDNSFKTNNY--------SDQRNIFEGPNRL--LSL  556 (601)
T ss_pred             cCccc-ccccccCcchhhhhh--ccceEEEEecCCCcc-ccccccccchhhhcc--------ccccccccChHHH--HHh
Confidence            68999 88889986 689999  999999999999999 5443332111 0000        0000011111111  345


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ++...+.++.+||+.+|.+|.+++++++.+||+.
T Consensus       557 lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~  590 (601)
T KOG0590|consen  557 LPRETRIIIYRMLQLDPTKRITIEQILNDEWIRS  590 (601)
T ss_pred             chhhHHHHHHHHccCChhheecHHHHhhChHhhh
Confidence            7788899999999999999999999999999975

>KOG0606|consensus

Probab=98.67  E-value=2e-08  Score=81.88  Aligned_cols=96  Identities=22%  Similarity=0.354  Sum_probs=71.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      .|||+ +...+|++.+|.|+  +|+++|+.+-|..|| .++.+..               .+...+.....-.......+
T Consensus       225 iaPeV-ilrqgygkpvdwwa--mGiIlyeFLVgcvpf-fGdtpee---------------lfg~visd~i~wpE~dea~p  285 (1205)
T KOG0606|consen  225 IAPEV-ILRQGYGKPVDWWA--MGIILYEFLVGCVPF-FGDTPEE---------------LFGQVISDDIEWPEEDEALP  285 (1205)
T ss_pred             cChhh-hhhhccCCCccHHH--HHHHHHHHheeeeec-cCCCHHH---------------HHhhhhhhhccccccCcCCC
Confidence            47999 88999999999999  999999999999999 7765543               22222222111111123468


Q ss_pred             HHHHHHHHHHhhhcccccC---CHHHHhcCcccccCCC
Q psy9738          81 QIFQDFLDQCLEEEVETRA---SASLLLKHPFLKIARP  115 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~---s~~ell~h~~~~~~~~  115 (133)
                      +++++++.++|+.+|..|.   ++-++.+|+||+.-..
T Consensus       286 ~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw  323 (1205)
T KOG0606|consen  286 PEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDW  323 (1205)
T ss_pred             HHHHHHHHHHHHhChHhhcccchhhhhhhccceeeccc
Confidence            9999999999999999995   4566789999986443

>KOG1187|consensus

Probab=98.55  E-value=2e-07  Score=69.44  Aligned_cols=97  Identities=20%  Similarity=0.308  Sum_probs=57.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhh-HHhhHHHHHHHhhhCCCCCcc---hh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYL-FILSCRQALYLIATNKKPEIK---EK   76 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~   76 (133)
                      ++||. +..+..+.++|+||  ||++++|+++|+.+. ....+..+.....+. ....-. ....+.   .+.+.   .+
T Consensus       245 ~~PEy-~~~g~lt~KsDVyS--FGVvllElitgr~~~-d~~~~~~~~~l~~w~~~~~~~~-~~~eii---D~~l~~~~~~  316 (361)
T KOG1187|consen  245 LAPEY-ASTGKLTEKSDVYS--FGVVLLELITGRKAV-DQSRPRGELSLVEWAKPLLEEG-KLREIV---DPRLKEGEYP  316 (361)
T ss_pred             CChhh-hccCCcCccccccc--chHHHHHHHhCCccc-CCCCCcccccHHHHHHHHHHCc-chhhee---CCCccCCCCC
Confidence            58999 77788899999999  999999999999888 322212211111111 000000 011111   12211   01


Q ss_pred             h-hhcHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          77 E-KLSQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        77 ~-~~~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      . ..-..+..+...|++.+|..||++.++.
T Consensus       317 ~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv  346 (361)
T KOG1187|consen  317 DEKEVKKLAELALRCLRPDPKERPTMSQVV  346 (361)
T ss_pred             hHHHHHHHHHHHHHHcCcCCCcCcCHHHHH
Confidence            0 1223355677899999999999999964

>KOG0984|consensus

Probab=98.42  E-value=1.5e-07  Score=64.83  Aligned_cols=57  Identities=21%  Similarity=0.336  Sum_probs=45.0

Q ss_pred             CCCccccC----CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch
Q psy9738           1 MAPEGGHH----RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE   75 (133)
Q Consensus         1 maPE~~~~----~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (133)
                      ||||. +.    .++|+.++|+||  +|+.+.||.+++.||.....+++               ++..+...+.|.++.
T Consensus       215 maPEr-i~~e~n~~gY~vksDvWS--LGItmiElA~lr~PY~~w~tpF~---------------qLkqvVeep~P~Lp~  275 (282)
T KOG0984|consen  215 MAPER-INPELNQKGYSVKSDVWS--LGITMIEMAILRFPYESWGTPFQ---------------QLKQVVEEPSPQLPA  275 (282)
T ss_pred             CChhh-cCcccCcccceeehhhhh--hhhhhhhhhhccccccccCCHHH---------------HHHHHhcCCCCCCcc
Confidence            78998 53    458999999999  99999999999999954455555               677777777777743

>KOG0603|consensus

Probab=98.40  E-value=3.9e-07  Score=70.82  Aligned_cols=84  Identities=17%  Similarity=0.259  Sum_probs=66.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.  ++...+|.||  +|+++++|++|..|| .+    .               ....|.... ..+  |..++
T Consensus       160 mApEI-~~--gh~~a~D~ws--~gvl~felltg~~pf-~~----~---------------~~~~Il~~~-~~~--p~~l~  211 (612)
T KOG0603|consen  160 RAPEI-IN--GHLSAADWWS--FGVLAFELLTGTLPF-GG----D---------------TMKRILKAE-LEM--PRELS  211 (612)
T ss_pred             hhhHh-hh--ccCCcccchh--hhhhHHHHhhCCCCC-ch----H---------------HHHHHhhhc-cCC--chhhh
Confidence            78999 55  6788999999  999999999999999 43    1               333333322 333  67889


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~  112 (133)
                      +.+++++..++..+|..|..     +.++++|+||+.
T Consensus       212 ~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~  248 (612)
T KOG0603|consen  212 AEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQS  248 (612)
T ss_pred             HHHHHHHHHHHhhCHHHHhccCcchhHHHhccchhee
Confidence            99999999999999999964     467889999974

>KOG0195|consensus

Probab=98.31  E-value=5.5e-07  Score=64.52  Aligned_cols=83  Identities=18%  Similarity=0.350  Sum_probs=60.7

Q ss_pred             CCCccccCCCCCC---CccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchh
Q psy9738           1 MAPEGGHHRKQYG---PKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEK   76 (133)
Q Consensus         1 maPE~~~~~~~~~---~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   76 (133)
                      |+||. +..++-+   ..+|+||  |.++++|+.+...|| ..-.+.+               .--++..++ .+.+  |
T Consensus       353 mspea-lqrkped~n~raadmws--faillwel~trevpf-adlspme---------------cgmkialeglrv~i--p  411 (448)
T KOG0195|consen  353 MSPEA-LQRKPEDLNIRAADMWS--FAILLWELNTREVPF-ADLSPME---------------CGMKIALEGLRVHI--P  411 (448)
T ss_pred             CCHHH-HhcCchhcchhhhhHHH--HHHHHHHhhcccccc-ccCCchh---------------hhhhhhhccccccC--C
Confidence            78998 6655543   4689999  999999999999999 5555444               112222222 2344  5


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHH
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLL  104 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~el  104 (133)
                      +-++.....++.-|+..||.+||.+..+
T Consensus       412 pgis~hm~klm~icmnedpgkrpkfdmi  439 (448)
T KOG0195|consen  412 PGISRHMNKLMNICMNEDPGKRPKFDMI  439 (448)
T ss_pred             CCccHHHHHHHHHHhcCCCCcCCCccee
Confidence            5678888899999999999999987654

>KOG1025|consensus

Probab=98.23  E-value=1.4e-06  Score=70.05  Aligned_cols=79  Identities=8%  Similarity=0.105  Sum_probs=58.6

Q ss_pred             cCCCCCCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhcHHHHH
Q psy9738           7 HHRKQYGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQD   85 (133)
Q Consensus         7 ~~~~~~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (133)
                      +....|...+|+|+  +|+..||++ .|..|+ .+-. ..               .+...... .-.++.|...+.+..-
T Consensus       872 i~~~~~thqSDVWs--fGVtiWElmTFGa~Py-~gi~-~~---------------eI~dlle~-geRLsqPpiCtiDVy~  931 (1177)
T KOG1025|consen  872 IRIRKYTHQSDVWS--FGVTIWELMTFGAKPY-DGIP-AE---------------EIPDLLEK-GERLSQPPICTIDVYM  931 (1177)
T ss_pred             hhccCCCchhhhhh--hhhhHHHHHhcCCCcc-CCCC-HH---------------HhhHHHhc-cccCCCCCCccHHHHH
Confidence            45678899999999  999999987 688888 4332 22               22222222 2236667778889999


Q ss_pred             HHHHHhhhcccccCCHHHHh
Q psy9738          86 FLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        86 ll~~~L~~~p~~R~s~~ell  105 (133)
                      ++.+||..|+..||+++++-
T Consensus       932 ~mvkCwmid~~~rp~fkel~  951 (1177)
T KOG1025|consen  932 VMVKCWMIDADSRPTFKELA  951 (1177)
T ss_pred             HHHHHhccCcccCccHHHHH
Confidence            99999999999999998863

>KOG1033|consensus

Probab=98.21  E-value=8.4e-07  Score=67.80  Aligned_cols=86  Identities=23%  Similarity=0.231  Sum_probs=58.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhC-CCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEG-EPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      |+||. +.+..|+.++||++  +|++++|++.. ...+ .   ...               .+..+.....++.  -..-
T Consensus       429 msPEQ-i~g~~y~~kvdIya--LGlil~EL~~~f~T~~-e---r~~---------------t~~d~r~g~ip~~--~~~d  484 (516)
T KOG1033|consen  429 MSPEQ-IRGQQYSEKVDIYA--LGLILAELLIQFSTQF-E---RIA---------------TLTDIRDGIIPPE--FLQD  484 (516)
T ss_pred             CCHHH-Hhhhhhhhhcchhh--HHHHHHHHHHHhccHH-H---HHH---------------hhhhhhcCCCChH--Hhhc
Confidence            79999 99999999999999  99999999872 2222 0   000               2222222222211  0111


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      -+.-..|+.++|.+.|.+||++.+.-.|.|.
T Consensus       485 ~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  485 YPEEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             CcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence            3455689999999999999988777667664

>KOG1094|consensus

Probab=98.21  E-value=9.2e-07  Score=68.80  Aligned_cols=86  Identities=14%  Similarity=0.139  Sum_probs=60.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHH--hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHH---hhhCC--CCCc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMI--EGEPPLIWNENPLRPHFLIPYLFILSCRQALYL---IATNK--KPEI   73 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~--~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~   73 (133)
                      ||+|. +.-+.++.++|+|+  ||+.+||++  +.+.|| ......+               ....   .....  ..-+
T Consensus       706 mawEs-illgkFttaSDvWa--fgvTlwE~~~~C~e~Py-~~lt~e~---------------vven~~~~~~~~~~~~~l  766 (807)
T KOG1094|consen  706 MAWES-ILLGKFTTASDVWA--FGVTLWEVFMLCREQPY-SQLTDEQ---------------VVENAGEFFRDQGRQVVL  766 (807)
T ss_pred             hhHHH-HHhccccchhhhhh--hHHHHHHHHHHHhhCch-hhhhHHH---------------HHHhhhhhcCCCCcceec
Confidence            78898 77788999999999  999999975  667888 3322211               1111   11111  1112


Q ss_pred             chhhhhcHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          74 KEKEKLSQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        74 ~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      ..|...+..+.+++..|+..+..+||+++++-
T Consensus       767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh  798 (807)
T KOG1094|consen  767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLH  798 (807)
T ss_pred             cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHH
Confidence            33566778888999999999999999999973

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=97.97  E-value=1.4e-05  Score=53.34  Aligned_cols=28  Identities=29%  Similarity=0.483  Sum_probs=24.3

Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHP  108 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~  108 (133)
                      ..+.+++.+|+..+|+.||++.++++|+
T Consensus       188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence            4557889999999999999999998764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1240|consensus

Probab=97.85  E-value=7.1e-06  Score=67.92  Aligned_cols=73  Identities=14%  Similarity=0.225  Sum_probs=48.6

Q ss_pred             CCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCC--cchhhhhcHHHHHHHH
Q psy9738          12 YGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPE--IKEKEKLSQIFQDFLD   88 (133)
Q Consensus        12 ~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~   88 (133)
                      ..++.||+|  .||+++|++ .|+++|  .-.                  ++..+.......  ..-...-....+.++.
T Consensus       215 L~paMDIFS--~GCViaELf~Eg~PlF--~LS------------------QL~aYr~~~~~~~e~~Le~Ied~~~Rnlil  272 (1431)
T KOG1240|consen  215 LTPAMDIFS--AGCVIAELFLEGRPLF--TLS------------------QLLAYRSGNADDPEQLLEKIEDVSLRNLIL  272 (1431)
T ss_pred             cChhhhhhh--hhHHHHHHHhcCCCcc--cHH------------------HHHhHhccCccCHHHHHHhCcCccHHHHHH
Confidence            456789999  999999997 567887  211                  222222221100  0001123457899999


Q ss_pred             HHhhhcccccCCHHHHhc
Q psy9738          89 QCLEEEVETRASASLLLK  106 (133)
Q Consensus        89 ~~L~~~p~~R~s~~ell~  106 (133)
                      .|++.||++|.+|++.|+
T Consensus       273 ~Mi~rdPs~RlSAedyL~  290 (1431)
T KOG1240|consen  273 SMIQRDPSKRLSAEDYLQ  290 (1431)
T ss_pred             HHHccCchhccCHHHHHH
Confidence            999999999999999875

>KOG0606|consensus

Probab=97.75  E-value=3e-05  Score=63.99  Aligned_cols=95  Identities=24%  Similarity=0.358  Sum_probs=71.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      .+||. ..+...+..+|.|+  +|+.+++.++|.+|| ....+-+               ....+.....+.-.-+...+
T Consensus      1002 laPe~-~lg~~hgs~ad~~~--~g~~l~e~l~g~pp~-na~tpq~---------------~f~ni~~~~~~~p~g~~~~s 1062 (1205)
T KOG0606|consen 1002 LAPEI-LLGRRHGSAADWWS--SGVCLFEVLTGIPPF-NAETPQQ---------------IFENILNRDIPWPEGPEEGS 1062 (1205)
T ss_pred             cCCcc-cccccCCCcchhhh--hhhhhhhhhcCCCCC-CCcchhh---------------hhhccccCCCCCCCCccccC
Confidence            37898 88888999999999  999999999999999 5444433               23333333222211235678


Q ss_pred             HHHHHHHHHHhhhcccccCCHH---HHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASAS---LLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~---ell~h~~~~~~~  114 (133)
                      ..+++++...|..++.+|..+.   ++-.|+||+...
T Consensus      1063 ~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~ 1099 (1205)
T KOG0606|consen 1063 YEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVD 1099 (1205)
T ss_pred             hhhhhhhhhhhccCchhccCcccccccccCCccCCCC
Confidence            8999999999999999998776   788999998643

>KOG4158|consensus

Probab=97.70  E-value=4.4e-05  Score=57.51  Aligned_cols=82  Identities=12%  Similarity=0.208  Sum_probs=57.9

Q ss_pred             CCCccccCCC-----CCC-CccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc
Q psy9738           1 MAPEGGHHRK-----QYG-PKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK   74 (133)
Q Consensus         1 maPE~~~~~~-----~~~-~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (133)
                      ||||+ ....     ..+ .+.|.|.  .|.+.||++...-|| ++......              ....+....-|.+ 
T Consensus       418 mAPEi-~ta~PGp~avvny~kAD~WA--~GalaYEIfg~~NPF-Y~rGem~L--------------~~r~Yqe~qLPal-  478 (598)
T KOG4158|consen  418 MAPEI-ATAVPGPNAVVNYEKADTWA--AGALAYEIFGRSNPF-YKRGEMLL--------------DTRTYQESQLPAL-  478 (598)
T ss_pred             cchhh-hhcCCCCceeeccchhhhhh--hhhhHHHHhccCCcc-cccchhee--------------chhhhhhhhCCCC-
Confidence            79998 5321     123 3689999  999999999999999 76332220              0111223334555 


Q ss_pred             hhhhhcHHHHHHHHHHhhhcccccCCHH
Q psy9738          75 EKEKLSQIFQDFLDQCLEEEVETRASAS  102 (133)
Q Consensus        75 ~~~~~~~~~~~ll~~~L~~~p~~R~s~~  102 (133)
                       +...++.+++++...|+.||++|++..
T Consensus       479 -p~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  479 -PSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             -cccCChHHHHHHHHHhcCCccccCCcc
Confidence             567899999999999999999999853

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=97.43  E-value=0.00015  Score=49.22  Aligned_cols=36  Identities=25%  Similarity=0.456  Sum_probs=30.4

Q ss_pred             CCCcccc-CCCCCCCccccchhHHHHHHHHHHhCCCCCCCC
Q psy9738           1 MAPEGGH-HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWN   40 (133)
Q Consensus         1 maPE~~~-~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~   40 (133)
                      ++||. . ....++.++|+|+  +|++++++++|+.|| ..
T Consensus       166 ~~pe~-~~~~~~~~~~~Dv~~--lG~~~~~l~~g~~pf-~~  202 (225)
T smart00221      166 LAPEV-LLGGKGYGEAVDIWS--LGVILYELLWGPEPF-SG  202 (225)
T ss_pred             CCHhH-hcCCCCCCchhhHHH--HHHHHHHHHHCCCCc-cc
Confidence            46787 5 5566777999999  999999999999999 55

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG4250|consensus

Probab=97.29  E-value=0.00012  Score=58.06  Aligned_cols=35  Identities=26%  Similarity=0.490  Sum_probs=30.6

Q ss_pred             CCCccccC-CCCCCCccccchhHHHHHHHHHHhCCCCCC
Q psy9738           1 MAPEGGHH-RKQYGPKVGYFGHWVSMAYLKMIEGEPPLI   38 (133)
Q Consensus         1 maPE~~~~-~~~~~~~~Diws~~~g~~~~~~~~g~~p~~   38 (133)
                      ++||+ +. .+.|+..+|.||  +|+++|++.+|..||.
T Consensus       190 LhPel-~E~q~~y~~tVDLWS--~GvtlY~caTG~lPF~  225 (732)
T KOG4250|consen  190 LHPEL-YERQKKYTATVDLWS--FGVTLYECATGELPFI  225 (732)
T ss_pred             cChHH-HhhccCcCceeehhh--hhhHHHHHhccCCCCC
Confidence            36777 65 478899999999  9999999999999994

>KOG1023|consensus

Probab=97.21  E-value=0.00097  Score=51.58  Aligned_cols=90  Identities=17%  Similarity=0.206  Sum_probs=56.5

Q ss_pred             CCCccccCCC---C----CCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-C---C
Q psy9738           1 MAPEGGHHRK---Q----YGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-N---K   69 (133)
Q Consensus         1 maPE~~~~~~---~----~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~   69 (133)
                      .|||. +...   .    -+.+.|++|  +|++++++++...|| .........           .+....+.. .   .
T Consensus       118 ~aPel-lr~~~~~~~~~~~~~~gdiYs--~~ii~~ei~~r~~~~-~~~~~~~~~-----------~eii~~~~~~~~~~~  182 (484)
T KOG1023|consen  118 TAPEL-LRGALSQSLESALTQKGDIYS--FGIIMYEILFRSGPF-DLRNLVEDP-----------DEIILRVKKGGSNPF  182 (484)
T ss_pred             cCHHH-hcccccccccccccccCCeeh--HHHHHHHHHhccCcc-ccccccCCh-----------HHHHHHHHhcCCCCc
Confidence            37887 5332   1    345689999  999999999999999 432222110           001222222 1   1


Q ss_pred             CCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          70 KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        70 ~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      .|.+.......+++..++..|+..+|..||++..+-
T Consensus       183 rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  183 RPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             CcchhhhhhcchHHHHHHHHhcccChhhCccHHHHH
Confidence            123221124556788999999999999999998864

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.18  E-value=0.00013  Score=52.89  Aligned_cols=63  Identities=13%  Similarity=0.154  Sum_probs=40.6

Q ss_pred             CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhcHHHHHHHHHH
Q psy9738          11 QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQC   90 (133)
Q Consensus        11 ~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~   90 (133)
                      .++.+.|.|.  +|+++|.+.+|..|| .......                .      ..+.+.....++...+.+|.++
T Consensus       226 ~~t~~~DaW~--LG~~ly~lWC~~lPf-~~~~~~~----------------~------~~~~f~~C~~~Pe~v~~LI~~l  280 (288)
T PF14531_consen  226 PYTFATDAWQ--LGITLYSLWCGRLPF-GLSSPEA----------------D------PEWDFSRCRDMPEPVQFLIRGL  280 (288)
T ss_dssp             EE-HHHHHHH--HHHHHHHHHHSS-ST-CCCGGGS----------------T------SGGGGTTSS---HHHHHHHHHH
T ss_pred             eeeeccCHHH--HHHHHHHHHHccCCC-CCCCccc----------------c------ccccchhcCCcCHHHHHHHHHH
Confidence            3567789999  999999999999999 3221111                0      0002222336788899999999


Q ss_pred             hhhccccc
Q psy9738          91 LEEEVETR   98 (133)
Q Consensus        91 L~~~p~~R   98 (133)
                      |+.+|.+|
T Consensus       281 L~~~~~~R  288 (288)
T PF14531_consen  281 LQRNPEDR  288 (288)
T ss_dssp             T-SSGGGS
T ss_pred             ccCCcccC
Confidence            99999987

>KOG1345|consensus

Probab=97.17  E-value=0.00015  Score=52.15  Aligned_cols=75  Identities=12%  Similarity=0.251  Sum_probs=47.9

Q ss_pred             CCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchh-hhhcHHHHHHHHHH
Q psy9738          12 YGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEK-EKLSQIFQDFLDQC   90 (133)
Q Consensus        12 ~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~   90 (133)
                      .+++.|+|.  +|++++.+++|.+|| .......+.++          +.. .-.....+.++.. ..+++.+..+.++-
T Consensus       202 ~~ps~D~Wq--fGIi~f~cltG~~PW-Qka~~~d~~Y~----------~~~-~w~~rk~~~~P~~F~~fs~~a~r~Fkk~  267 (378)
T KOG1345|consen  202 VNPSTDIWQ--FGIIFFYCLTGKFPW-QKASIMDKPYW----------EWE-QWLKRKNPALPKKFNPFSEKALRLFKKS  267 (378)
T ss_pred             ecccccchh--eeeeeeeeecCCCcc-hhhhccCchHH----------HHH-HHhcccCccCchhhcccCHHHHHHHHHh
Confidence            467899999  999999999999999 54333332221          011 1111122222211 33678888888999


Q ss_pred             hhhcccccCC
Q psy9738          91 LEEEVETRAS  100 (133)
Q Consensus        91 L~~~p~~R~s  100 (133)
                      |..++.+|..
T Consensus       268 lt~~~~drck  277 (378)
T KOG1345|consen  268 LTPRFKDRCK  277 (378)
T ss_pred             cCCcccccch
Confidence            9999998843

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.11  E-value=0.0022  Score=44.98  Aligned_cols=96  Identities=20%  Similarity=0.264  Sum_probs=60.9

Q ss_pred             CCCccccCC---CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCC-cchh
Q psy9738           1 MAPEGGHHR---KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPE-IKEK   76 (133)
Q Consensus         1 maPE~~~~~---~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   76 (133)
                      ++||. +.+   ..++...|+|+  +|+++++++.|..|+ .......           ... ............ ....
T Consensus       175 ~~pe~-~~~~~~~~~~~~~D~~s--~g~~~~~~~~~~~p~-~~~~~~~-----------~~~-~~~~~~~~~~~~~~~~~  238 (384)
T COG0515         175 MAPEV-LLGLSLAYASSSSDIWS--LGITLYELLTGLPPF-EGEKNSS-----------ATS-QTLKIILELPTPSLASP  238 (384)
T ss_pred             CCHHH-hcCCCCCCCCchHhHHH--HHHHHHHHHhCCCCC-CCCCccc-----------cHH-HHHHHHHhcCCcccccc
Confidence            47888 544   56788999999  999999999999998 4433210           000 111111111111 1101


Q ss_pred             --hh----hcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          77 --EK----LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        77 --~~----~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                        ..    ......+++..++..+|..|.+..+...+++...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  280 (384)
T COG0515         239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH  280 (384)
T ss_pred             cCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence              11    1257889999999999999999988777765543

>KOG2052|consensus

Probab=97.02  E-value=0.00079  Score=51.25  Aligned_cols=90  Identities=17%  Similarity=0.376  Sum_probs=51.3

Q ss_pred             CCCccccCCC----CCC--CccccchhHHHHHHHHHHh----C------CCCCCCCCCCCCCcccchhhHHhhHHHHHHH
Q psy9738           1 MAPEGGHHRK----QYG--PKVGYFGHWVSMAYLKMIE----G------EPPLIWNENPLRPHFLIPYLFILSCRQALYL   64 (133)
Q Consensus         1 maPE~~~~~~----~~~--~~~Diws~~~g~~~~~~~~----g------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (133)
                      ||||+ +...    .+.  ..+||||  ||.++||+..    |      ++|| ++--+....+.           .+.+
T Consensus       387 MAPEv-Ldetin~~~Fesyk~ADIYa--fgLVlWEiarRc~~ggi~eey~~Py-yd~Vp~DPs~e-----------eMrk  451 (513)
T KOG2052|consen  387 MAPEV-LDETINMKHFESYKRADIYA--FGLVLWEIARRCESGGIVEEYQLPY-YDVVPSDPSFE-----------EMRK  451 (513)
T ss_pred             cChHH-hhhhcChhhhhhhhHHHHHH--HHHHHHHHHHHhhcCCEehhhcCCc-ccCCCCCCCHH-----------HHhc
Confidence            89999 6432    222  3589999  9999999862    2      3677 44322221111           2222


Q ss_pred             hhhC--CCCCcchhhhhcH---HHHHHHHHHhhhcccccCCHHHHh
Q psy9738          65 IATN--KKPEIKEKEKLSQ---IFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        65 ~~~~--~~~~~~~~~~~~~---~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +.-.  ..|.++..-.-.+   .+..+++.|+..+|..|.|+-.+.
T Consensus       452 VVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  452 VVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             ceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence            2211  1233322212223   345678899999999999986653

>KOG0590|consensus

Probab=96.85  E-value=0.0003  Score=55.89  Aligned_cols=95  Identities=21%  Similarity=0.222  Sum_probs=65.5

Q ss_pred             CCCccccCCC-CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRK-QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~-~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||. ..+. ..+...|+||  .|+++..+++|..|+ .........+.           ..  +.............+
T Consensus       196 ~a~E~-~~~~~~~~~~~d~~S--~g~~l~~~~~g~~p~-~~~~~~~~~~~-----------~~--~~~~~~~~~~~~~~~  258 (601)
T KOG0590|consen  196 GAPEH-LSGKAYRGPSVDVWS--LGIVLSAMLTGELPW-DFPSRKDGRYS-----------SW--KSNKGRFTQLPWNSI  258 (601)
T ss_pred             CCccc-ccchhhcCCCccccc--ccccccccccCCCCc-cccccccccce-----------ee--cccccccccCccccC
Confidence            57888 5553 4467899999  999999999999988 33222221110           00  001111111113557


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      +....+++.+++..+++.|.+.+++..++|+..
T Consensus       259 ~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  259 SDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             ChhhhhcccccccCCchhccccccccccccccc
Confidence            788889999999999999999999999999876

>KOG3653|consensus

Probab=96.69  E-value=0.0031  Score=48.41  Aligned_cols=96  Identities=14%  Similarity=0.287  Sum_probs=53.8

Q ss_pred             CCCccccCC-CCCC-----CccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhh----HHhhHHHHHHHhhhC-C
Q psy9738           1 MAPEGGHHR-KQYG-----PKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYL----FILSCRQALYLIATN-K   69 (133)
Q Consensus         1 maPE~~~~~-~~~~-----~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~   69 (133)
                      ||||+ +.+ -.+.     ...|+|+  +|.++||+++.-.-+ ..  .....+..||.    +.-++.+....+... .
T Consensus       385 MAPEv-LEgainl~d~~Afkr~DvYa--mgLVLWEi~SRC~~~-~~--~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~  458 (534)
T KOG3653|consen  385 MAPEV-LEGAINLQDRDAFKRIDVYA--MGLVLWEIASRCTDA-DP--GPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQ  458 (534)
T ss_pred             cCHHH-HhhhcccccHHHHHHHHHHH--HHHHHHHHHhhcccc-cC--CCCCcccCchhHHhcCCCCHHHHHHHHHhhcc
Confidence            89999 532 1222     3589999  999999998754333 21  11233333333    111111122222222 2


Q ss_pred             CCCcchh---hhhcHHHHHHHHHHhhhcccccCCHH
Q psy9738          70 KPEIKEK---EKLSQIFQDFLDQCLEEEVETRASAS  102 (133)
Q Consensus        70 ~~~~~~~---~~~~~~~~~ll~~~L~~~p~~R~s~~  102 (133)
                      .|.++.-   +.....+++.+..|+-.|++.|.|+.
T Consensus       459 RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  459 RPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             CCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence            3444321   22335677889999999999999874

>KOG2137|consensus

Probab=96.31  E-value=0.0014  Score=52.28  Aligned_cols=96  Identities=17%  Similarity=0.209  Sum_probs=64.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHH-hCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMI-EGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      .|||. +....-+..+|++|  +|+++|.+. .|...+ .+..... .             ..................+
T Consensus       176 ~apE~-~~~~~~~~~sd~fS--lG~li~~i~~~gk~i~-~a~~~~~-~-------------~~~~~~~~~~~~~~~s~~~  237 (700)
T KOG2137|consen  176 LAPEY-LLGTTNTPASDVFS--LGVLIYTIYNGGKSII-AANGGLL-S-------------YSFSRNLLNAGAFGYSNNL  237 (700)
T ss_pred             ccchh-hcccccccccccee--eeeEEEEEecCCcchh-hccCCcc-h-------------hhhhhcccccccccccccC
Confidence            37888 66666677899999  999999988 444444 2222111 0             0011111111111123568


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      +.++++-+.+++..+..-||++.+++..+||....
T Consensus       238 p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~  272 (700)
T KOG2137|consen  238 PSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPG  272 (700)
T ss_pred             cHHHHHHHHHHhcCCcccCcchhhhhcccccCCch
Confidence            89999999999999999999999999999998643

>KOG1266|consensus

Probab=95.35  E-value=0.012  Score=43.80  Aligned_cols=82  Identities=23%  Similarity=0.218  Sum_probs=49.9

Q ss_pred             CCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhcHHHHHHHHHHhh
Q psy9738          13 GPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLE   92 (133)
Q Consensus        13 ~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~   92 (133)
                      +..+||++  +|+-..+|..+..--..+.+...                ....+..-...+     ....-++++.+|++
T Consensus       260 ~~a~dIy~--fgmcAlemailEiq~tnseS~~~----------------~ee~ia~~i~~l-----en~lqr~~i~kcl~  316 (458)
T KOG1266|consen  260 TGASDIYK--FGMCALEMAILEIQSTNSESKVE----------------VEENIANVIIGL-----ENGLQRGSITKCLE  316 (458)
T ss_pred             ccchhhhh--hhHHHHHHHHheeccCCCcceee----------------hhhhhhhheeec-----cCccccCcCccccc
Confidence            45689999  99999999877543201111111                001111111111     11223578899999


Q ss_pred             hcccccCCHHHHhcCcccccCCCCC
Q psy9738          93 EEVETRASASLLLKHPFLKIARPLA  117 (133)
Q Consensus        93 ~~p~~R~s~~ell~h~~~~~~~~~~  117 (133)
                      -.|..||++.+++.||.+.......
T Consensus       317 ~eP~~rp~ar~llfHpllfeVhslk  341 (458)
T KOG1266|consen  317 GEPNGRPDARLLLFHPLLFEVHSLK  341 (458)
T ss_pred             CCCCCCcchhhhhcCceeeecchHH
Confidence            9999999999999999876554433

>KOG0601|consensus

Probab=87.52  E-value=0.59  Score=36.88  Aligned_cols=87  Identities=17%  Similarity=0.061  Sum_probs=54.5

Q ss_pred             CCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhhhc
Q psy9738           2 APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEKLS   80 (133)
Q Consensus         2 aPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   80 (133)
                      +||.  ..+-++...|+++  +|.++.+...+.... ..+....                +..+.... +..+  ....+
T Consensus       296 ~ke~--~~~l~~~~~di~s--l~ev~l~~~l~~~~~-~~g~~~~----------------W~~~r~~~ip~e~--~~~~s  352 (524)
T KOG0601|consen  296 AKEL--LNGLATFASDIFS--LGEVILEAILGSHLP-SVGKNSS----------------WSQLRQGYIPLEF--CEGGS  352 (524)
T ss_pred             Chhh--hccccchHhhhcc--hhhhhHhhHhhcccc-cCCCCCC----------------ccccccccCchhh--hcCcc
Confidence            4444  3445677899999  999999998887655 3321111                00011000 0111  11234


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      ..+...+.+++..++-.|++++.++.|+++.
T Consensus       353 ~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~  383 (524)
T KOG0601|consen  353 SSLRSVTSQMLDEDPRLRLTAQILTALNVIH  383 (524)
T ss_pred             hhhhhHHHHhcCcchhhhhHHHHHhcccccc
Confidence            4555577889999999999999999999886

>KOG1093|consensus

Probab=85.30  E-value=0.49  Score=37.67  Aligned_cols=86  Identities=19%  Similarity=0.113  Sum_probs=52.1

Q ss_pred             CCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCc------chhhhhcHHHHHH
Q psy9738          13 GPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEI------KEKEKLSQIFQDF   86 (133)
Q Consensus        13 ~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l   86 (133)
                      ++++|||+  +|.++.++.-|...+ ......+      +++      .+...........      ...-..+..+..+
T Consensus       109 ~pKsdVws--l~~i~~el~L~~~l~-~~~~~s~------~l~------~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~  173 (725)
T KOG1093|consen  109 GPKSDVWS--LGFIILELYLGISLE-AELTESE------YLE------ILLKYYTDDQELLSTAMEHLIQLLADKKRLPL  173 (725)
T ss_pred             Ccchhhhh--HHHHHHHHHHhhHHH-HHHHHHH------HHH------HHHHhccCchhHHHHHHHHHHHHhhhHhHHHH
Confidence            46899999  999999999887655 2111111      000      0000000000000      0012245667788


Q ss_pred             HHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          87 LDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        87 l~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      +.+|+...|..||...+++.++.|..+
T Consensus       174 ~~~c~~~~~~ir~l~~~~~k~~i~~ev  200 (725)
T KOG1093|consen  174 LKKCLWLEPIIRPLPMELSKRCSFTEV  200 (725)
T ss_pred             hccCCccccccccchhHHhcCccHHHH
Confidence            899999999999998888888888655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	133
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		3e-29
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		4e-29
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		5e-29
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		5e-29
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		5e-29
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-10
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-10
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-10
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-10
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-10
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-10
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		4e-10
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		5e-09
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		9e-08
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		1e-07
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		5e-06
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-05
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-05
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		2e-05
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-05
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		2e-05
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		6e-04
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		7e-04

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score =  123 bits (309), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/133 (54%), Positives = 89/133 (66%), Gaps = 19/133 (14%)
Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 183 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 223
Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  LL+H FLKIA+PL+SLT
Sbjct: 224 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLT 283
Query: 121 PLIMAAKEAAKGH 133
           PLI AAKEA K +
Sbjct: 284 PLIAAAKEATKNN 296

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score =  122 bits (307), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 72/133 (54%), Positives = 89/133 (66%), Gaps = 19/133 (14%)
Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 184 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 224
Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  L++H FLKIA+PL+SLT
Sbjct: 225 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLT 284
Query: 121 PLIMAAKEAAKGH 133
           PLI AAKEA K +
Sbjct: 285 PLIAAAKEATKNN 297

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score =  122 bits (307), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 72/133 (54%), Positives = 89/133 (66%), Gaps = 19/133 (14%)
Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 184 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 224
Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  L++H FLKIA+PL+SLT
Sbjct: 225 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLT 284
Query: 121 PLIMAAKEAAKGH 133
           PLI AAKEA K +
Sbjct: 285 PLIAAAKEATKNN 297

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score =  122 bits (307), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 72/133 (54%), Positives = 89/133 (66%), Gaps = 19/133 (14%)
Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 183 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 223
Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  EKLS IF+DFL++CL+ +VE R SA  LL+H FLKIA+PL+SLT
Sbjct: 224 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLT 283
Query: 121 PLIMAAKEAAKGH 133
           PLI AAKEA K +
Sbjct: 284 PLIAAAKEATKNN 296

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score =  122 bits (306), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 72/133 (54%), Positives = 89/133 (66%), Gaps = 19/133 (14%)
Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   + +  ++MIEGEPP + NENPLR               
Sbjct: 183 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 223
Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  EKLS IF+DFL++CL+ +VE R SA  LL+H FLKIA+PL+SLT
Sbjct: 224 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLT 283
Query: 121 PLIMAAKEAAKGH 133
           PLI AAKEA K +
Sbjct: 284 PLIAAAKEATKNN 296

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 19/123 (15%)
Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    R  YGP+V  +   + +  ++M++GEPP  +NE PL+               
Sbjct: 237 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK--------------- 277
Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           A+ +I  N  P +K   K+S   + FLD+ L  +   RA+A+ LLKHPFL  A P AS+ 
Sbjct: 278 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIV 337
Query: 121 PLI 123
           PL+
Sbjct: 338 PLM 340

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 19/123 (15%)
Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    R  YGP+V  +   + +  ++M++GEPP  +NE PL+               
Sbjct: 194 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK--------------- 234
Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           A+ +I  N  P +K   K+S   + FLD+ L  +   RA+A+ LLKHPFL  A P AS+ 
Sbjct: 235 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIV 294
Query: 121 PLI 123
           PL+
Sbjct: 295 PLM 297

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 19/123 (15%)
Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    R  YGP+V  +   + +  ++M++GEPP  +NE PL+               
Sbjct: 314 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK--------------- 354
Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           A+ +I  N  P +K   K+S   + FLD+ L  +   RA+A+ LLKHPFL  A P AS+ 
Sbjct: 355 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIV 414
Query: 121 PLI 123
           PL+
Sbjct: 415 PLM 417

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 19/123 (15%)
Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    R  YGP+V  +   + +  ++M++GEPP  +NE PL+               
Sbjct: 183 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK--------------- 223
Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           A+ +I  N  P +K   K+S   + FLD+ L  +   RA+A+ LLKHPFL  A P AS+ 
Sbjct: 224 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIV 283
Query: 121 PLI 123
           PL+
Sbjct: 284 PLM 286

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 19/123 (15%)
Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    R  YGP+V  +   + +  ++M++GEPP  +NE PL+               
Sbjct: 187 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK--------------- 227
Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           A+ +I  N  P +K   K+S   + FLD+ L  +   RA+A+ LLKHPFL  A P AS+ 
Sbjct: 228 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIV 287
Query: 121 PLI 123
           PL+
Sbjct: 288 PLM 290

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 19/123 (15%)
Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    R  YGP+V  +   + +  ++M++GEPP  +NE PL+               
Sbjct: 192 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK--------------- 232
Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           A+ +I  N  P +K   K+S   + FLD+ L  +   RA+A+ LLKHPFL  A P AS+ 
Sbjct: 233 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIV 292
Query: 121 PLI 123
           PL+
Sbjct: 293 PLM 295

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 19/123 (15%)
Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    R  YG +V  +   + +  ++MI+GEPP  +NE PL               Q
Sbjct: 208 MAPEV-ISRLPYGTEVDIWS--LGIMVIEMIDGEPPY-FNEPPL---------------Q 248
Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           A+  I  +  P +K+  K+S + + FLD  L  E   RA+A  LL HPFLK+A P + + 
Sbjct: 249 AMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLKLAGPPSCIV 308
Query: 121 PLI 123
           PL+
Sbjct: 309 PLM 311

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 16/107 (14%)
Query: 23  VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQI 82
           + +  ++M EG+PP   + +P+R  F+IP               TN  P  ++ E  S  
Sbjct: 211 LGITAIEMAEGKPPYA-DIHPMRAIFMIP---------------TNPPPTFRKPELWSDN 254
Query: 83  FQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEA 129
           F DF+ QCL +  E RA+A+ LL+HPF++ A+ ++ L  LI  A + 
Sbjct: 255 FTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSILRDLINEAMDV 301

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 51  PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
           P LF ++   ALY IA N+ P ++     S+ F++F+D CL++  + R ++ +LLKH F+
Sbjct: 251 PPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309
Query: 111 KIARPLASLTPLIMAAKEAAK 131
              RP   +  LI   K+A +
Sbjct: 310 LRERPPTVIMDLIQRTKDAVR 330

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 51  PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
           P LF ++   ALY IA N+ P ++     S+ F++F+D CL++  + R ++ +LLKH F+
Sbjct: 212 PPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270
Query: 111 KIARPLASLTPLIMAAKEAAK 131
              RP   +  LI   K+A +
Sbjct: 271 LRERPPTVIMDLIQRTKDAVR 291

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 19/123 (15%)
Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    R  Y  +V  +   + +  ++M++GEPP  ++++P+               Q
Sbjct: 208 MAPEV-ISRSLYATEVDIWS--LGIMVIEMVDGEPPY-FSDSPV---------------Q 248
Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           A+  +  +  P++K   K+S + +DFL++ L  + + RA+A  LL HPFL        L 
Sbjct: 249 AMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLV 308
Query: 121 PLI 123
           PLI
Sbjct: 309 PLI 311

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 17/89 (19%)
Query: 23  VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQI 82
           + +  ++M EG PPL  + +P+R               AL+LI  N  P +K K K S+ 
Sbjct: 220 LGITAIEMAEGAPPLC-DMHPMR---------------ALFLIPRNPAPRLKSK-KWSKK 262
Query: 83  FQDFLDQCLEEEVETRASASLLLKHPFLK 111
           FQ F++ CL +    R +   L+KHPF++
Sbjct: 263 FQSFIESCLVKNHSQRPATEQLMKHPFIR 291

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 60  QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
           + L  IA ++ P + +  + S  F+DFL +CLE+ V+ R + S LL+HPF+ +
Sbjct: 247 RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 299

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 60  QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
           + L  IA ++ P + +  + S  F+DFL +CLE+ V+ R + S LL+HPF+ +
Sbjct: 247 RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 299

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 60  QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
           + L  IA ++ P + +  + S  F+DFL +CLE+ V+ R + S LL+HPF+ +
Sbjct: 247 RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 299

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 56  LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 115
           L+  + L  IA +  P +    K S  F+DFL   L++  ETR SA+ LL+HPF+     
Sbjct: 217 LNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITS 276
Query: 116 LASLTPLIMAAK 127
             +L  L+  AK
Sbjct: 277 NKALRELVAEAK 288

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 56  LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 115
           L+  + L  IA +  P +    K S  F+DFL   L++  ETR SA+ LL+HPF+     
Sbjct: 225 LNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITS 284
Query: 116 LASLTPLIMAAK 127
             +L  L+  AK
Sbjct: 285 NKALRELVAEAK 296

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	133
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-35
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	8e-33
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	6e-31
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-29
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	4e-29
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-22
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-21
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-21
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-20
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-16
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	8e-15
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-14
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-11
3fme_A	290	Dual specificity mitogen-activated protein kinase;	6e-11
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-10
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-10
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-08
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-07
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-07
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	7e-07
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	8e-07
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-06
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-04
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-04
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	8e-04

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  122 bits (309), Expect = 2e-35
 Identities = 77/136 (56%), Positives = 89/136 (65%), Gaps = 25/136 (18%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVS---MAYLKMIEGEPPLIWNENPLRPHFLIPYLFILS 57
           MAPE    RK YGPKV     W S   MA ++MIEGEPP   NENPLR            
Sbjct: 183 MAPEV-VTRKAYGPKVDI---W-SLGIMA-IEMIEGEPPY-LNENPLR------------ 223

Query: 58  CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA 117
              ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  LL+H FLKIA+PL+
Sbjct: 224 ---ALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLS 280

Query: 118 SLTPLIMAAKEAAKGH 133
           SLTPLI AAKEA K +
Sbjct: 281 SLTPLIAAAKEATKNN 296

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  116 bits (292), Expect = 8e-33
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 25/133 (18%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVS---MAYLKMIEGEPPLIWNENPLRPHFLIPYLFILS 57
           MAPE    R  Y  +V     W S   M  ++M++GEPP  ++++P++            
Sbjct: 208 MAPEV-ISRSLYATEVDI---W-SLGIMV-IEMVDGEPPY-FSDSPVQ------------ 248

Query: 58  CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA 117
              A+  +  +  P++K   K+S + +DFL++ L  + + RA+A  LL HPFL       
Sbjct: 249 ---AMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPE 305

Query: 118 SLTPLIMAAKEAA 130
            L PLI   ++  
Sbjct: 306 CLVPLIQLYRKQT 318

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  111 bits (279), Expect = 6e-31
 Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 25/134 (18%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVS---MAYLKMIEGEPPLIWNENPLRPHFLIPYLFILS 57
           MAPE       Y         W S    A ++M EG+PP   + +P+R            
Sbjct: 192 MAPEV-IQEIGYNCVADI---W-SLGITA-IEMAEGKPPY-ADIHPMR------------ 232

Query: 58  CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA 117
              A+++I TN  P  ++ E  S  F DF+ QCL +  E RA+A+ LL+HPF++ A+ ++
Sbjct: 233 ---AIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289

Query: 118 SLTPLIMAAKEAAK 131
            L  LI  A +   
Sbjct: 290 ILRDLINEAMDVKL 303

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  106 bits (266), Expect = 4e-29
 Identities = 40/136 (29%), Positives = 54/136 (39%), Gaps = 28/136 (20%)

Query: 1   MAPE----GGHHRKQYGPKVGYFGHWVS---MAYLKMIEGEPPLIWNENPLRPHFLIPYL 53
           MAPE           Y  K      W S      ++M + EPP     NP+R        
Sbjct: 184 MAPEVVMCETMKDTPYDYKADI---W-SLGITL-IEMAQIEPPH-HELNPMR-------- 229

Query: 54  FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA 113
                   L  IA +  P +    K S  F+DFL   L++  ETR SA+ LL+HPF+   
Sbjct: 230 -------VLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI 282

Query: 114 RPLASLTPLIMAAKEA 129
               +L  L+  AK  
Sbjct: 283 TSNKALRELVAEAKAE 298

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  107 bits (268), Expect = 4e-29
 Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 27/136 (19%)

Query: 1   MAPE--GGHHRKQYGPKVGYFGHWVS---MAYLKMIEGEPPLIWNENPLRPHFLIPYLFI 55
           MAPE        QY  KV     W S      +++ E +PPL +N N +           
Sbjct: 217 MAPEVILAMDEGQYDGKVDV---W-SLGITC-IELAERKPPL-FNMNAMS---------- 260

Query: 56  LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 115
                ALY IA N+ P ++     S+ F++F+D CL++  + R ++ +LLKH F+   RP
Sbjct: 261 -----ALYHIAQNESPALQSG-HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 314

Query: 116 LASLTPLIMAAKEAAK 131
              +  LI   K+A +
Sbjct: 315 PTVIMDLIQRTKDAVR 330

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 88.6 bits (220), Expect = 3e-22
 Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 29/138 (21%)

Query: 1   MAPE----GGHHRKQYGPKVGYFGHWVS---MAYLKMIEGEPPLIWNENPLRPHFLIPYL 53
           MAPE      +    Y  K      W S    A  +M EG PPL  + +P+R        
Sbjct: 196 MAPEVIACDENPDATYDFKSDL---W-SLGITAI-EMAEGAPPL-CDMHPMR-------- 241

Query: 54  FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA 113
                  AL+LI  N  P +K K K S+ FQ F++ CL +    R +   L+KHPF++  
Sbjct: 242 -------ALFLIPRNPAPRLKSK-KWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ 293

Query: 114 RPLASLTPLIMAAKEAAK 131
                +   +    +  K
Sbjct: 294 PNERQVRIQLKDHIDRTK 311

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 85.8 bits (213), Expect = 2e-21
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 28/132 (21%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVS---MAYLKMIEGEPPLIWNENPLRPHFLIPYLFILS 57
           MAPE    +  Y  K      W S    A  ++  GEPP     +P++            
Sbjct: 186 MAPEV-IKQSAYDSKADI---W-SLGITAI-ELARGEPPH-SELHPMK------------ 226

Query: 58  CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL-KIARPL 116
               L+LI  N  P ++     S+  ++F++ CL +E   R +A  LLKH F+ + A+  
Sbjct: 227 ---VLFLIPKNNPPTLEGN--YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKT 281

Query: 117 ASLTPLIMAAKE 128
           + LT LI   K 
Sbjct: 282 SYLTELIDRYKR 293

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 85.8 bits (213), Expect = 2e-21
 Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 29/129 (22%)

Query: 1   MAPEGGHHRKQYGPKVGY--FGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC 58
           MAPE     + Y  K     FG    +  +++  G  P      P++             
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFG----ITAIELATGAAPY-HKYPPMK------------- 234

Query: 59  RQALYLIATNKKPEIKE-------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
              L L   N  P ++         +K  + F+  +  CL+++ E R +A+ LL+H F +
Sbjct: 235 --VLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292

Query: 112 IARPLASLT 120
            A+    L 
Sbjct: 293 KAKNKEFLQ 301

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 84.0 bits (208), Expect = 1e-20
 Identities = 17/104 (16%), Positives = 28/104 (26%), Gaps = 16/104 (15%)

Query: 28  LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 87
           L M+ G  P                            IA+   P  +     + +    +
Sbjct: 247 LHMLNGCHPW-TQYFRG---------------PLCLKIASEPPPIREIPPSCAPLTAQAI 290

Query: 88  DQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK 131
            + L +E   RASA  L +     +       +P     KE   
Sbjct: 291 QEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEPRG 334

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 71.6 bits (176), Expect = 4e-16
 Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 24/113 (21%)

Query: 1   MAPEGGHHRKQYGPKVG-Y-FGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC 58
           MAPE     ++Y   V  Y FG    M  L+M   E P  ++E                 
Sbjct: 197 MAPEMY--EEKYDESVDVYAFG----MCMLEMATSEYP--YSE--------------CQN 234

Query: 59  RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
              +Y   T+        +      ++ ++ C+ +  + R S   LL H F +
Sbjct: 235 AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 287

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 68.4 bits (167), Expect = 8e-15
 Identities = 23/129 (17%), Positives = 34/129 (26%), Gaps = 31/129 (24%)

Query: 30  MIEGEPPLIWNENPLRPHFLIP----------------------------YLFILSCRQA 61
           +  G  P   +    +                                       S   +
Sbjct: 230 LANGHVPF-KDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTS 288

Query: 62  LYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLAS--L 119
               +    P        S  F  F++QCL+   + R SAS LL H F K  +  AS  L
Sbjct: 289 TPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEAL 348

Query: 120 TPLIMAAKE 128
             L+     
Sbjct: 349 PELLRPVTP 357

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 66.2 bits (162), Expect = 4e-14
 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 18/97 (18%)

Query: 28  LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKLSQIFQDF 86
           ++M  G+PP      P                 A++ +   K  PEI E   +S   + F
Sbjct: 216 IEMATGKPPFYELGEPQ---------------AAMFKVGMFKVHPEIPES--MSAEAKAF 258

Query: 87  LDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLI 123
           + +C E + + RA A+ LL   FLK++       P +
Sbjct: 259 ILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQPKL 295

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 15/88 (17%)

Query: 28  LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 87
           +++  G+ P    +                    L  +   + P +      S  FQ F+
Sbjct: 220 VELATGQFPYKNCKTDFE---------------VLTKVLQEEPPLLPGHMGFSGDFQSFV 264

Query: 88  DQCLEEEVETRASASLLLKHPFLKIARP 115
             CL ++   R   + LL+H F+K    
Sbjct: 265 KDCLTKDHRKRPKYNKLLEHSFIKRYET 292

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 57.3 bits (139), Expect = 6e-11
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 25/119 (21%)

Query: 1   MAPE---GGHHRKQYGPK--VGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFI 55
           MAPE      ++K Y  K  +   G  ++M  +++     P      P +          
Sbjct: 176 MAPERINPELNQKGYSVKSDIWSLG--ITM--IELAILRFPYDSWGTPFQ---------- 221

Query: 56  LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR 114
                 L  +     P++   +K S  F DF  QCL++  + R +   L++HPF  +  
Sbjct: 222 -----QLKQVVEEPSPQLPA-DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 274

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 55.8 bits (135), Expect = 2e-10
 Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 26/121 (21%)

Query: 1   MAPE---GGHHRKQYGPK--VGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFI 55
           MAPE       R+ Y  +  V   G  +++   ++  G  P     +             
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLG--ITL--YELATGRFPYPKWNSVFD---------- 237

Query: 56  LSCRQALYLIATNKKPEIKEKEKL--SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA 113
                 L  +     P++   E+   S  F +F++ CL ++   R     LLKHPF+ + 
Sbjct: 238 -----QLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292

Query: 114 R 114
            
Sbjct: 293 E 293

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 49.8 bits (119), Expect = 3e-08
 Identities = 15/47 (31%), Positives = 23/47 (48%)

Query: 68  NKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR 114
           N+ P        S  FQDF+++CL +    RA    L+ H F+K + 
Sbjct: 286 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 332

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 48.1 bits (115), Expect = 1e-07
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 57  SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR 114
                 + I   + P I +   LSQ F + L   +  + E R SA  L+KH  L  A 
Sbjct: 232 RNGDQWHEIRQGRLPRIPQV--LSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 287

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 47.5 bits (113), Expect = 2e-07
 Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 19/113 (16%)

Query: 1   MAPE--GGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC 58
           +APE      ++     V  F       Y+ + EG  P                      
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYV-ISEGSHPF-GKSLQ--------------- 235

Query: 59  RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
           RQA  L+       +  ++    I ++ +++ +  + + R SA  +LKHPF  
Sbjct: 236 RQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFW 288

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 45.8 bits (109), Expect = 7e-07
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 51  PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
           P+  I++    L+ I  +   EI+  +   +  QD L  CL+ + + R S   LL HP++
Sbjct: 219 PFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277

Query: 111 KIARP 115
           +I   
Sbjct: 278 QIQTH 282

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 45.6 bits (108), Expect = 8e-07
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 51  PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
           P+  I++    L+ I  +   EI+  +   +  QD L  CL+ + + R S   LL HP++
Sbjct: 266 PFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324

Query: 111 KIARP 115
           +I   
Sbjct: 325 QIQTH 329

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 51  PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
           P+  I++    L+ I  +   EI+  +   +  QD L  CL+ + + R S   LL HP++
Sbjct: 238 PFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296

Query: 111 KI 112
           +I
Sbjct: 297 QI 298

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%)

Query: 64  LIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
           L      PE      LS   +  L   LE + + RA+A  LL  P L+
Sbjct: 264 LRQGYLPPEFTAG--LSSELRSVLVMMLEPDPKLRATAEALLALPVLR 309

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 70  KPEIKEKEKLS----QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTP 121
           +  + EK K S    +   DFL   L+ +   RA A  L+ HP+LK    +  +  
Sbjct: 293 EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV 348

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 8/82 (9%), Positives = 24/82 (29%), Gaps = 9/82 (10%)

Query: 53  LFILSC-------RQALYLIATNKKPEIKEK--EKLSQIFQDFLDQCLEEEVETRASASL 103
            F +         R  +     +   E      +   ++ +  +   ++ +   R  A  
Sbjct: 221 FFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGART 280

Query: 104 LLKHPFLKIARPLASLTPLIMA 125
           LL   +L +      +   + +
Sbjct: 281 LLNSGWLPVKHQDEVIKEALKS 302

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 37.0 bits (86), Expect = 8e-04
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 69  KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
           +  E          F+D + + L+ + +TR      L+H F K
Sbjct: 335 RAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	133
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.89
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.88
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.85
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.83
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.83
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.82
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.82
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.82
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.8
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.79
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.78
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.77
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.77
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.74
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.73
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.72
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.71
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.7
3niz_A	311	Rhodanese family protein; structural genomics, str	99.69
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.69
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.69
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.69
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.68
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.68
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.67
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.67
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.67
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.67
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.67
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.67
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.67
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.67
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.66
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.66
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.66
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.66
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.66
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.66
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.66
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.66
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.66
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.66
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.66
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.65
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.65
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.65
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.65
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.65
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.65
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.65
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.65
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.65
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.65
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.65
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.65
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.65
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.65
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.64
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.64
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.64
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.64
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.64
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.64
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.64
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.64
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.64
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.64
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.64
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.64
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.64
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.64
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.64
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.63
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.63
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.63
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.63
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.63
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.63
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.63
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.63
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.63
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.63
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.63
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.62
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.62
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.62
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.62
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.62
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.62
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.62
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.62
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.62
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.62
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.62
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.62
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.62
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.61
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.61
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.61
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.61
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.61
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.61
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.6
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.6
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.6
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.6
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.6
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.6
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.6
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.6
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.6
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.6
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.6
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.6
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.6
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.6
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.6
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.6
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.6
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.59
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.59
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.59
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.59
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.59
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.59
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.59
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.59
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.59
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.59
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.59
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.58
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.58
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.58
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.58
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.58
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.58
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.58
3bhy_A	283	Death-associated protein kinase 3; death associate	99.58
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.58
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.58
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.58
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.57
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.57
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.56
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.56
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.56
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.56
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.55
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.54
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.54
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.53
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.52
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.52
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.51
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.51
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.5
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.49
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.48
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.46
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.46
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.45
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.45
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.44
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.44
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.44
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.44
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.43
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.43
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.43
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.43
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.42
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.42
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.42
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.42
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.42
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.42
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.41
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.41
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.41
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.41
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.4
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.4
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.4
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.4
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.4
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.39
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.39
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.39
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.39
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.39
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.39
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.39
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.39
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.39
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.38
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.38
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.38
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.38
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.37
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.37
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.37
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.36
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.36
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.36
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.35
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.35
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.35
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.35
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.35
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.34
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.34
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.34
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.34
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.33
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.33
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.33
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.33
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.32
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.32
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.32
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.31
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.31
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.3
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.3
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.3
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.3
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.3
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.29
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.28
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.27
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.27
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.27
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.26
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.26
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.26
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.26
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.25
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.24
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.23
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.23
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.23
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.2
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.18
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.15
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.14
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.11
3uqc_A	286	Probable conserved transmembrane protein; structur	98.97
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.84
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.83
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.81

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.89  E-value=1.8e-24  Score=158.13  Aligned_cols=106  Identities=42%  Similarity=0.725  Sum_probs=89.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|.+|| .+.+...               .+..+.....+.+..+..++
T Consensus       237 mAPEv-l~~~~y~~~~DiWS--lGvilyeml~G~~PF-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~s  297 (346)
T 4fih_A          237 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK---------------AMKMIRDNLPPRLKNLHKVS  297 (346)
T ss_dssp             CCHHH-HTTCCBCTHHHHHH--HHHHHHHHHHSSCTT-TTSCHHH---------------HHHHHHHSSCCCCSCGGGSC
T ss_pred             CCHHH-HCCCCCCcHHHHHH--HHHHHHHHHHCCCCC-CCcCHHH---------------HHHHHHcCCCCCCCccccCC
Confidence            79999 88889999999999  999999999999999 6554333               44455555555555567789


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMA  125 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~  125 (133)
                      +++++|+.+||..||.+|+|+.|+|+||||+.....+++.|++..
T Consensus       298 ~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~p~~l~pl~~~  342 (346)
T 4fih_A          298 PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQ  342 (346)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGGGTGGGSTT
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCCCcccCccccc
Confidence            999999999999999999999999999999998888888877654

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.88  E-value=5.7e-24  Score=159.02  Aligned_cols=106  Identities=42%  Similarity=0.725  Sum_probs=90.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|.+|| .+.+...               .+..+.....+.+..+..++
T Consensus       314 mAPEv-l~~~~y~~~~DiWS--lGvilyeml~G~~PF-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~s  374 (423)
T 4fie_A          314 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK---------------AMKMIRDNLPPRLKNLHKVS  374 (423)
T ss_dssp             CCHHH-HTTCCBCTHHHHHH--HHHHHHHHHHSSCTT-TTSCHHH---------------HHHHHHHSCCCCCSCTTSSC
T ss_pred             CCHHH-HCCCCCCcHHHHHH--HHHHHHHHHHCCCCC-CCcCHHH---------------HHHHHHcCCCCCCcccccCC
Confidence            89999 88899999999999  999999999999999 6554433               44555555555555556789


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMA  125 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~  125 (133)
                      +++++|+.+||..||.+|+|+.|+|+||||+.....+++.|++..
T Consensus       375 ~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~p~~l~pl~~~  419 (423)
T 4fie_A          375 PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQ  419 (423)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGGGTGGGSGG
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCCCccccchhhh
Confidence            999999999999999999999999999999999888888887654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.85  E-value=1.4e-21  Score=139.99  Aligned_cols=92  Identities=22%  Similarity=0.330  Sum_probs=71.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+ .|+.++||||  +||++|+|++|..|| .+.....               .+.............+...+
T Consensus       197 mAPE~-~~~-~y~~~~DiwS--lGvilyelltg~~Pf-~~~~~~~---------------~~~~~i~~~~~~~~~~~~~~  256 (290)
T 3fpq_A          197 MAPEM-YEE-KYDESVDVYA--FGMCMLEMATSEYPY-SECQNAA---------------QIYRRVTSGVKPASFDKVAI  256 (290)
T ss_dssp             CCGGG-GGT-CCCTHHHHHH--HHHHHHHHHHSSCTT-TTCSSHH---------------HHHHHHTTTCCCGGGGGCCC
T ss_pred             cCHHH-cCC-CCCcHHHHHH--HHHHHHHHHHCCCCC-CCCCcHH---------------HHHHHHHcCCCCCCCCccCC
Confidence            89999 654 6999999999  999999999999999 5443322               33333333332222245678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      +++++|+.+||..||.+|||++++|+||||+.
T Consensus       257 ~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          257 PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence            89999999999999999999999999999985

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.83  E-value=2e-21  Score=142.23  Aligned_cols=91  Identities=14%  Similarity=0.213  Sum_probs=76.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|..|| .+.+...               ....+.....+.+  +..++
T Consensus       192 mAPE~-l~~~~y~~~~DiwS--lGvilyemltG~~PF-~~~~~~~---------------~~~~i~~~~~~~~--~~~~s  250 (350)
T 4b9d_A          192 LSPEI-CENKPYNNKSDIWA--LGCVLYELCTLKHAF-EAGSMKN---------------LVLKIISGSFPPV--SLHYS  250 (350)
T ss_dssp             CCHHH-HTTCCCCHHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH---------------HHHHHHHTCCCCC--CTTSC
T ss_pred             cCHHH-HCCCCCCcHHHHHH--HHHHHHHHHHCCCCC-CCcCHHH---------------HHHHHHcCCCCCC--CccCC
Confidence            79999 88889999999999  999999999999999 6554333               4445555554444  45689


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      +++++|+.+||..||.+|||+.++|+||||+.
T Consensus       251 ~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          251 YDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence            99999999999999999999999999999975

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.83  E-value=6.7e-21  Score=136.00  Aligned_cols=112  Identities=65%  Similarity=1.008  Sum_probs=92.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| .+.+...               ....+.....+.+..+...+
T Consensus       183 ~aPE~-~~~~~~~~~~Diws--lG~il~ell~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  243 (297)
T 3fxz_A          183 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMIEGEPPY-LNENPLR---------------ALYLIATNGTPELQNPEKLS  243 (297)
T ss_dssp             CCHHH-HHCSCBCTHHHHHH--HHHHHHHHHHSSCTT-TTSCHHH---------------HHHHHHHHCSCCCSCGGGSC
T ss_pred             cChhh-hcCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhCCCCCCCCccccC
Confidence            68999 77888999999999  999999999999999 5443322               33333334444444466789


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK  131 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~~~  131 (133)
                      ..+.+|+.+||..||.+|||+.++++||||+.........|++.++++..+
T Consensus       244 ~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~~~p~~~~~~~~~~  294 (297)
T 3fxz_A          244 AIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATK  294 (297)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGGGGHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhhChhhcccCcccccchHHHHHhhhhh
Confidence            999999999999999999999999999999999999999999999887765

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.82  E-value=3.8e-21  Score=136.73  Aligned_cols=91  Identities=21%  Similarity=0.255  Sum_probs=72.7

Q ss_pred             CCCccccCCCCC-CCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQY-GPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~-~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..| +.++||||  +||++|+|++|+.|| .+.+..                .+........+.+  +..+
T Consensus       178 ~APE~-~~~~~y~~~~~DiwS--lGvily~lltg~~PF-~~~~~~----------------~~~~~i~~~~~~~--p~~~  235 (275)
T 3hyh_A          178 AAPEV-ISGKLYAGPEVDVWS--CGVILYVMLCRRLPF-DDESIP----------------VLFKNISNGVYTL--PKFL  235 (275)
T ss_dssp             SCHHH-HSSSSCCCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHH----------------HHHHHHHHTCCCC--CTTS
T ss_pred             CChhh-hcCCCCCCChhhhHH--HHHHHHHHHHCCCCC-CCCCHH----------------HHHHHHHcCCCCC--CCCC
Confidence            79999 777776 57899999  999999999999999 543321                2222233334444  4568


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ++++++|+.+||..||.+|+|++|+++||||+..
T Consensus       236 s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          236 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence            9999999999999999999999999999999753

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.82  E-value=1.9e-20  Score=136.44  Aligned_cols=97  Identities=25%  Similarity=0.205  Sum_probs=77.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|..|| .+.+...               ....+....++....+..++
T Consensus       223 mAPE~-~~~~~y~~~~DiwS--lGvilyemltG~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~s  283 (336)
T 4g3f_A          223 MAPEV-VMGKPCDAKVDIWS--SCCMMLHMLNGCHPW-TQYFRGP---------------LCLKIASEPPPIREIPPSCA  283 (336)
T ss_dssp             CCHHH-HTTCCCCTHHHHHH--HHHHHHHHHHSSCSS-TTTCCSC---------------CHHHHHHSCCGGGGSCTTSC
T ss_pred             cCHHH-HCCCCCCcHHHHHH--HHHHHHHHHHCcCCC-CCCCHHH---------------HHHHHHcCCCCchhcCccCC
Confidence            79999 88889999999999  999999999999999 6655444               34444444432222245789


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHH-------------hcCcccccCCCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLL-------------LKHPFLKIARPL  116 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~el-------------l~h~~~~~~~~~  116 (133)
                      +.+.+|+.+||..||.+|||+.|+             ++|||+.....+
T Consensus       284 ~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~P  332 (336)
T 4g3f_A          284 PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEP  332 (336)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCCC
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCCC
Confidence            999999999999999999999997             579999875544

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.82  E-value=8.2e-21  Score=136.73  Aligned_cols=91  Identities=19%  Similarity=0.313  Sum_probs=74.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +||++|+|++|..|| .+.+...               ....+... .+.+  +..++
T Consensus       193 mAPE~-~~~~~y~~~~DiwS--lGvilyemltG~~PF-~~~~~~~---------------~~~~i~~~-~~~~--p~~~s  250 (304)
T 3ubd_A          193 MAPEV-VNRRGHTQSADWWS--FGVLMFEMLTGTLPF-QGKDRKE---------------TMTMILKA-KLGM--PQFLS  250 (304)
T ss_dssp             CCHHH-HHTSCCCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHC-CCCC--CTTSC
T ss_pred             CCHHH-hccCCCCCCCcccc--hHHHHHHHHhCCCCC-CCcCHHH---------------HHHHHHcC-CCCC--CCcCC
Confidence            79999 88889999999999  999999999999999 6544332               33334333 3344  55789


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~~  113 (133)
                      +++++|+.+||+.||.+|+|     ++|+++||||+..
T Consensus       251 ~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          251 PEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence            99999999999999999998     5899999999864

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.80  E-value=9.7e-21  Score=136.68  Aligned_cols=91  Identities=19%  Similarity=0.268  Sum_probs=74.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|..|| .+.+...               ....+.. ..+.+  +..++
T Consensus       201 mAPEv-l~~~~y~~~~DiWS--lGvilyeml~G~~PF-~~~~~~~---------------~~~~i~~-~~~~~--p~~~s  258 (311)
T 4aw0_A          201 VSPEL-LTEKSACKSSDLWA--LGCIIYQLVAGLPPF-RAGNEGL---------------IFAKIIK-LEYDF--PEKFF  258 (311)
T ss_dssp             CCHHH-HHHSCBCHHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHH-TCCCC--CTTCC
T ss_pred             CCHHH-HcCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHc-CCCCC--CcccC
Confidence            79999 88889999999999  999999999999999 6544322               3333333 33445  45789


Q ss_pred             HHHHHHHHHHhhhcccccCCHHH------HhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASL------LLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~e------ll~h~~~~~~  113 (133)
                      +++++|+.+||..||.+|+|++|      +++||||++.
T Consensus       259 ~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i  297 (311)
T 4aw0_A          259 PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  297 (311)
T ss_dssp             HHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence            99999999999999999999987      5899999864

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.79  E-value=5.6e-20  Score=135.13  Aligned_cols=105  Identities=18%  Similarity=0.278  Sum_probs=67.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhH----------------------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC----------------------   58 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------   58 (133)
                      ||||++.....|+.++|+||  +||++|+|++|+.|| .+.+...+.+.    .|...                      
T Consensus       213 ~APE~l~~~~~y~~~~DiWS--lG~il~ell~G~~Pf-~~~~~~~~~l~----~I~~~~G~~~~~~~~~~~~~~~~~~~~  285 (361)
T 4f9c_A          213 RAPEVLTKCPNQTTAIDMWS--AGVIFLSLLSGRYPF-YKASDDLTALA----QIMTIRGSRETIQAAKTFGKSILCSKE  285 (361)
T ss_dssp             CCHHHHTTCSCCCTHHHHHH--HHHHHHHHHHTCSSS-SCCSSHHHHHH----HHHHHHCHHHHHHHHHHTTEEEEESSC
T ss_pred             cCHHHHcCCCCCCCccchhh--hHHHHHHHHHCCCCC-CCCCCHHHHHH----HHHHhcCCccchhhhhhcccccccccc
Confidence            79999444456999999999  999999999999999 54432110000    00000                      


Q ss_pred             ------HHHHHHhhh-------------CCCCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          59 ------RQALYLIAT-------------NKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        59 ------~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                            +.....+..             ...........+++++.||+.+||+.||.+|+|++|+|+||||+.
T Consensus       286 ~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          286 VPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD  358 (361)
T ss_dssp             CCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred             CcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence                  000000000             000000111346789999999999999999999999999999985

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.78  E-value=1.2e-19  Score=134.87  Aligned_cols=95  Identities=23%  Similarity=0.257  Sum_probs=69.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-------------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-------------   67 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------   67 (133)
                      ||||++.....|+.++||||  +||++|+|++|.+|| .+.+...               .+..+..             
T Consensus       229 ~APEv~~~~~~~~~~~DiWS--lG~il~ell~G~~pF-~g~~~~~---------------~l~~I~~~~g~p~~~~~~~~  290 (398)
T 4b99_A          229 RAPELMLSLHEYTQAIDLWS--VGCIFGEMLARRQLF-PGKNYVH---------------QLQLIMMVLGTPSPAVIQAV  290 (398)
T ss_dssp             CCHHHHTTCSCCCTHHHHHH--HHHHHHHHHHTSCSS-CCSSHHH---------------HHHHHHHHHCCCCGGGTC--
T ss_pred             cCHHHhcCCCCCCChhheeh--hHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHHhcCCCChHHhhhh
Confidence            79999444456799999999  999999999999999 6654322               1111111             


Q ss_pred             ----------CCCC--Ccch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          68 ----------NKKP--EIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        68 ----------~~~~--~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                                ..+.  ..+.   ....++++.+|+.+||..||.+|+|+.|+|+||||+..
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  351 (398)
T 4b99_A          291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY  351 (398)
T ss_dssp             ---CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred             hhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence                      0000  0000   12357899999999999999999999999999999864

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.77  E-value=3.5e-19  Score=128.44  Aligned_cols=111  Identities=32%  Similarity=0.607  Sum_probs=87.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+.....+.+......+
T Consensus       208 ~aPE~-~~~~~~~~~~Dv~s--lG~il~el~~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  268 (321)
T 2c30_A          208 MAPEV-ISRSLYATEVDIWS--LGIMVIEMVDGEPPY-FSDSPVQ---------------AMKRLRDSPPPKLKNSHKVS  268 (321)
T ss_dssp             CCHHH-HTTCCBCTHHHHHH--HHHHHHHHHHSSCTT-TTSCHHH---------------HHHHHHHSSCCCCTTGGGSC
T ss_pred             cCHhh-hcCCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHhcCCCCCcCccccCC
Confidence            68999 77888999999999  999999999999999 5443222               23333444444444456678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHHh
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAA  130 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~~  130 (133)
                      +.+.+|+.+||..||.+||++.++++||||......+.+.+++...++..
T Consensus       269 ~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~~~~~~~~~~~~~~~~  318 (321)
T 2c30_A          269 PVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLVPLIQLYRKQT  318 (321)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCCCGGGGHHHHHHC----
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcChhhccCCCcccchHHHHHHHHhh
Confidence            99999999999999999999999999999999888999999888766543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.77  E-value=2.1e-19  Score=138.88  Aligned_cols=95  Identities=22%  Similarity=0.253  Sum_probs=75.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|.+|| .+.+...               .+..+..... ........+
T Consensus       323 ~APEv-~~~~~y~~~~DiWS--lGvilyeml~G~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  383 (573)
T 3uto_A          323 AAPEV-AEGKPVGYYTDMWS--VGVLSYILLSGLSPF-GGENDDE---------------TLRNVKSCDWNMDDSAFSGI  383 (573)
T ss_dssp             CCHHH-HTTCCBCHHHHHHH--HHHHHHHHHHSCCSS-CCSSHHH---------------HHHHHHTTCCCCCSGGGTTS
T ss_pred             cCHHH-hCCCCCCcHHHHHH--HHHHHHHHHHCCCCC-CCcCHHH---------------HHHHHHhCCCCCCcccccCC
Confidence            79999 88899999999999  999999999999999 6554332               3333333221 222223568


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      +..+++|+.+||+.||.+|+|+.|+|+||||+...
T Consensus       384 s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~  418 (573)
T 3uto_A          384 SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN  418 (573)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCC
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCC
Confidence            99999999999999999999999999999998644

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.74  E-value=5e-18  Score=120.59  Aligned_cols=113  Identities=34%  Similarity=0.499  Sum_probs=88.4

Q ss_pred             CCCcccc----CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchh
Q psy9738           1 MAPEGGH----HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEK   76 (133)
Q Consensus         1 maPE~~~----~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (133)
                      +|||++.    ....++.++|+||  +|++++++++|..|| ...+...               ....+.....+....+
T Consensus       184 ~aPE~~~~~~~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~  245 (302)
T 2j7t_A          184 MAPEVVMCETMKDTPYDYKADIWS--LGITLIEMAQIEPPH-HELNPMR---------------VLLKIAKSDPPTLLTP  245 (302)
T ss_dssp             CCHHHHHHHHTTSTTTTTHHHHHH--HHHHHHHHHHSSCTT-TTSCHHH---------------HHHHHHHSCCCCCSSG
T ss_pred             cCCeeeccccCCCCCCchhhhHHH--HHHHHHHHhcCCCCC-ccCCHHH---------------HHHHHhccCCcccCCc
Confidence            5888822    4667888999999  999999999999999 4433221               2333333444444345


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHHhc
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK  131 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~~~  131 (133)
                      ...+..+.+++.+||..||.+|||+.++++||||+.......+..++.+.++.+.
T Consensus       246 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~  300 (302)
T 2j7t_A          246 SKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKAEVM  300 (302)
T ss_dssp             GGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCCHHHHHHHHHHHHHHT
T ss_pred             cccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccchhHHHHHHHHhhhhh
Confidence            6778999999999999999999999999999999998888888888888776654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.73  E-value=1.5e-18  Score=135.83  Aligned_cols=94  Identities=19%  Similarity=0.384  Sum_probs=72.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||++..+..|+.++|+||  +||++|+|++|.+|| .+.+... ..            .+........+.+  +..++
T Consensus       357 mAPEvl~~~~~y~~~vDiWS--LGvilYEmLtG~~PF-~~~~~~~-~~------------~i~~~i~~~~~~~--p~~~S  418 (689)
T 3v5w_A          357 MAPEVLQKGVAYDSSADWFS--LGCMLFKLLRGHSPF-RQHKTKD-KH------------EIDRMTLTMAVEL--PDSFS  418 (689)
T ss_dssp             CCHHHHSTTCCCCTHHHHHH--HHHHHHHHHHSSCTT-CGGGCCC-HH------------HHHHHHHHCCCCC--CTTSC
T ss_pred             cCHHHHhCCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCChHH-HH------------HHHHhhcCCCCCC--CccCC
Confidence            89999334568999999999  999999999999999 6543332 00            1222222333444  55789


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~  112 (133)
                      +++++|+.+||..||.+|++     ++++++||||++
T Consensus       419 ~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~  455 (689)
T 3v5w_A          419 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS  455 (689)
T ss_dssp             HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTT
T ss_pred             HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccC
Confidence            99999999999999999997     799999999975

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.72  E-value=7e-18  Score=123.05  Aligned_cols=112  Identities=35%  Similarity=0.625  Sum_probs=87.8

Q ss_pred             CCCcccc--CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGH--HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~--~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      ||||++.  ....++.++|+||  +|+++++|++|..|| .+.+...               ....+.....+... +..
T Consensus       217 ~aPE~~~~~~~~~~~~~~Diws--lG~il~ell~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~-~~~  277 (348)
T 1u5q_A          217 MAPEVILAMDEGQYDGKVDVWS--LGITCIELAERKPPL-FNMNAMS---------------ALYHIAQNESPALQ-SGH  277 (348)
T ss_dssp             CCHHHHHTTSSCCBCTHHHHHH--HHHHHHHHHHSSCTT-TTSCHHH---------------HHHHHHHSCCCCCC-CTT
T ss_pred             eCHhhhccccCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCChHH---------------HHHHHHhcCCCCCC-CCC
Confidence            6899832  3567899999999  999999999999999 5443222               33334444333322 345


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK  131 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~~~  131 (133)
                      .+..+.+|+.+||..||.+|||+.++++|||+........+.+++...++.++
T Consensus       278 ~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~  330 (348)
T 1u5q_A          278 WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVR  330 (348)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCTTHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccCCcchhhHHHHHHHHHHh
Confidence            78899999999999999999999999999999988888888888888777664

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.71  E-value=1.3e-17  Score=119.06  Aligned_cols=107  Identities=36%  Similarity=0.632  Sum_probs=84.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| ...+...               ....+.....+.+..+...+
T Consensus       192 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  252 (314)
T 3com_A          192 MAPEV-IQEIGYNCVADIWS--LGITAIEMAEGKPPY-ADIHPMR---------------AIFMIPTNPPPTFRKPELWS  252 (314)
T ss_dssp             CCHHH-HSSSCBCTTHHHHH--HHHHHHHHHHSSCTT-TTSCHHH---------------HHHHHHHSCCCCCSSGGGSC
T ss_pred             cChhh-cCCCCCCccccHHH--HHHHHHHHHhCCCCC-CCCChHH---------------HHHHHhcCCCcccCCcccCC
Confidence            58898 77778999999999  999999999999999 5433221               22333334444444456678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAA  126 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~  126 (133)
                      ..+.+|+.+||..||.+||++.++++||||+.......+..++...
T Consensus       253 ~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~~~~~~~~~~~~  298 (314)
T 3com_A          253 DNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSILRDLINEA  298 (314)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCcchHHHHHhhhh
Confidence            9999999999999999999999999999999888888787777654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.70  E-value=2.9e-18  Score=123.12  Aligned_cols=91  Identities=16%  Similarity=0.220  Sum_probs=67.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++   || .+....              ...+..+.....+..  ....+
T Consensus       197 mAPE~-~~~~~y~~~~DiwS--lGvilyell~---Pf-~~~~~~--------------~~~~~~~~~~~~p~~--~~~~~  253 (299)
T 4g31_A          197 MSPEQ-IHGNSYSHKVDIFS--LGLILFELLY---PF-STQMER--------------VRTLTDVRNLKFPPL--FTQKY  253 (299)
T ss_dssp             SCHHH-HTTCCCCTHHHHHH--HHHHHHHHHS---CC-SSHHHH--------------HHHHHHHHTTCCCHH--HHHHC
T ss_pred             cCHHH-HcCCCCCCHHHHHH--HHHHHHHHcc---CC-CCccHH--------------HHHHHHHhcCCCCCC--CcccC
Confidence            79999 88889999999999  9999999995   77 321100              002222222222222  34567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      +...+|+.+||+.||.+|||+.++++||||+...
T Consensus       254 ~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~  287 (299)
T 4g31_A          254 PCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD  287 (299)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence            7888999999999999999999999999998643

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.69  E-value=3.4e-17  Score=117.44  Aligned_cols=96  Identities=23%  Similarity=0.226  Sum_probs=69.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHh---hhCCC-CCcc--
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLI---ATNKK-PEIK--   74 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~--   74 (133)
                      ||||++.....|+.++|+||  +|+++++|++|..|| .+.....               ....+   ..... ....  
T Consensus       186 ~aPE~~~~~~~~~~~~Diws--lG~il~~ll~g~~pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  247 (311)
T 3niz_A          186 RAPDVLMGSKKYSTSVDIWS--IGCIFAEMITGKPLF-PGVTDDD---------------QLPKIFSILGTPNPREWPQV  247 (311)
T ss_dssp             CCHHHHTTCCSCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSTTT---------------HHHHHHHHHCCCCTTTSGGG
T ss_pred             CCHHHhcCCCCCCchHHhHH--HHHHHHHHHhCCCCC-CCCChHH---------------HHHHHHHHHCCCChHHhhhh
Confidence            68999334467899999999  999999999999999 5544333               11111   11110 0000  


Q ss_pred             ---------------------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          75 ---------------------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        75 ---------------------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                                           .....++++.+|+.+||..||.+|||+.++++||||+...
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             TTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             hccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence                                 0123567899999999999999999999999999998644

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.69  E-value=1.3e-17  Score=122.83  Aligned_cols=94  Identities=24%  Similarity=0.312  Sum_probs=67.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC-CCC--------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN-KKP--------   71 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------   71 (133)
                      ||||++.....|+.++||||  +||++++|++|.+|| .+.+...               .+..+... ..+        
T Consensus       197 ~aPE~~~~~~~~~~~~DiwS--lG~il~ell~g~~pf-~~~~~~~---------------~~~~i~~~~~~p~~~~~~~~  258 (388)
T 3oz6_A          197 RAPEILLGSTKYTKGIDMWS--LGCILGEILCGKPIF-PGSSTMN---------------QLERIIGVIDFPSNEDVESI  258 (388)
T ss_dssp             CCHHHHTTCCCCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH---------------HHHHHHHHHCCCCHHHHHTS
T ss_pred             CCHHHhcCCCCCCChhhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHHhcCCCCHHHHHhc
Confidence            68999444478999999999  999999999999999 6543221               11111000 000        


Q ss_pred             ------------------------C-cc----------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          72 ------------------------E-IK----------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        72 ------------------------~-~~----------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                                              . ++          .+...++.+.+|+.+||..||.+|+|++++|+||||+.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~  334 (388)
T 3oz6_A          259 QSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSI  334 (388)
T ss_dssp             CCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTT
T ss_pred             cCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHH
Confidence                                    0 00          01145788999999999999999999999999999864

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.69  E-value=2.2e-17  Score=121.20  Aligned_cols=93  Identities=19%  Similarity=0.354  Sum_probs=72.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch--hhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE--KEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~   78 (133)
                      ||||+ +.+..|+.++|+||  +|+++|+|++|..|| .+.+...               ....+. .....+..  ...
T Consensus       185 ~aPE~-~~~~~~~~~~Diws--lGvil~~ll~g~~Pf-~~~~~~~---------------~~~~i~-~~~~~~~~~~~~~  244 (361)
T 2yab_A          185 VAPEI-VNYEPLGLEADMWS--IGVITYILLSGASPF-LGDTKQE---------------TLANIT-AVSYDFDEEFFSQ  244 (361)
T ss_dssp             CCHHH-HTTCCCCTHHHHHH--HHHHHHHHHHSCCSS-CCSSHHH---------------HHHHHH-TTCCCCCHHHHTT
T ss_pred             ECchH-HcCCCCCccccHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHH-hcCCCCCchhccC
Confidence            68999 77888999999999  999999999999999 5543222               222232 22233321  245


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      .+..+++|+.+||..||.+|||+.++++||||+..
T Consensus       245 ~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          245 TSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence            78999999999999999999999999999999853

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.69  E-value=1.2e-17  Score=121.03  Aligned_cols=92  Identities=18%  Similarity=0.271  Sum_probs=71.0

Q ss_pred             CCCccccCCCCCC-CccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYG-PKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~-~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..+. .++|+||  +|+++++|++|..|| .+.+...               ....+. .....+  +...
T Consensus       180 ~aPE~-~~~~~~~~~~~Diws--lG~il~ell~g~~pf-~~~~~~~---------------~~~~i~-~~~~~~--p~~~  237 (328)
T 3fe3_A          180 AAPEL-FQGKKYDGPEVDVWS--LGVILYTLVSGSLPF-DGQNLKE---------------LRERVL-RGKYRI--PFYM  237 (328)
T ss_dssp             CCHHH-HHTCCCCSHHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHH-HCCCCC--CTTS
T ss_pred             eCccc-ccCCCcCCchhhhhh--hHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHH-hCCCCC--CCCC
Confidence            68999 6666664 6899999  999999999999999 5443221               222222 223333  4467


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ++.+.+|+.+||..||.+|||++++++||||+...
T Consensus       238 s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          238 STDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             CHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence            89999999999999999999999999999998644

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.68  E-value=1.1e-16  Score=112.23  Aligned_cols=96  Identities=19%  Similarity=0.215  Sum_probs=71.3

Q ss_pred             CCCccccCCCCC-CCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQY-GPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~-~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..+ +.++|+||  +|++++++++|..|| .+.....               ...................
T Consensus       174 ~aPE~-~~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~  234 (276)
T 2yex_A          174 VAPEL-LKRREFHAEPVDVWS--CGIVLTAMLAGELPW-DQPSDSC---------------QEYSDWKEKKTYLNPWKKI  234 (276)
T ss_dssp             CCGGG-GTCSSBCHHHHHHHH--HHHHHHHHHHSSCCC-SCSCTTS---------------HHHHHHHTTCTTSTTGGGS
T ss_pred             cChHH-HhcCCCCCCcchHHH--HHHHHHHHHhCCCCC-CCCchHH---------------HHHHHhhhcccccCchhhc
Confidence            58999 655554 67899999  999999999999999 5443332               1111112222222223567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                      +..+.+++.+||..||.+|||+.++++||||+....
T Consensus       235 ~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          235 DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             CHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence            899999999999999999999999999999986543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.68  E-value=6.4e-17  Score=117.65  Aligned_cols=90  Identities=24%  Similarity=0.443  Sum_probs=72.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| .+.+...               ....+.. ....+  +..++
T Consensus       172 ~aPE~-~~~~~~~~~~Diws--lG~il~ell~g~~Pf-~~~~~~~---------------~~~~i~~-~~~~~--p~~~s  229 (337)
T 1o6l_A          172 LAPEV-LEDNDYGRAVDWWG--LGVVMYEMMCGRLPF-YNQDHER---------------LFELILM-EEIRF--PRTLS  229 (337)
T ss_dssp             CCGGG-GSSSCBCTTHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHH-CCCCC--CTTSC
T ss_pred             CChhh-hcCCCCCchhhccc--chhHHHHHhcCCCCC-CCCCHHH---------------HHHHHHc-CCCCC--CCCCC
Confidence            69999 88888999999999  999999999999999 5443221               2222222 23334  45678


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      +.+.+|+.+||..||.+|+     ++.++++||||+.
T Consensus       230 ~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~  266 (337)
T 1o6l_A          230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence            9999999999999999999     8999999999974

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.67  E-value=8.5e-17  Score=117.24  Aligned_cols=97  Identities=19%  Similarity=0.240  Sum_probs=73.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc--hhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK--EKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   78 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++|..|| .......               ..............  ....
T Consensus       217 ~aPE~-~~~~~~~~~~Diws--lG~il~ell~g~~pf-~~~~~~~---------------~~~~~i~~~~~~~~~~~~~~  277 (349)
T 2w4o_A          217 CAPEI-LRGCAYGPEVDMWS--VGIITYILLCGFEPF-YDERGDQ---------------FMFRRILNCEYYFISPWWDE  277 (349)
T ss_dssp             SCHHH-HTTCCCCTHHHHHH--HHHHHHHHHHSSCTT-CCTTCHH---------------HHHHHHHTTCCCCCTTTTTT
T ss_pred             cCHHH-hcCCCCCcccchHH--HHHHHHHHHhCCCCC-CCCcccH---------------HHHHHHHhCCCccCCchhhh
Confidence            68999 77888999999999  999999999999999 5433221               12222222222111  1245


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  116 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~  116 (133)
                      .+..+.+|+.+||..||.+||++.++++||||......
T Consensus       278 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~  315 (349)
T 2w4o_A          278 VSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAAN  315 (349)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCC
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCccc
Confidence            78899999999999999999999999999999875543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.67  E-value=1.4e-17  Score=121.02  Aligned_cols=85  Identities=14%  Similarity=0.259  Sum_probs=68.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++||||  +|+++|||++ |+.|| .+.+...               ....+.....+..  |..+
T Consensus       227 mAPE~-~~~~~~~~~sDvwS--~Gvvl~Ellt~G~~Pf-~~~~~~~---------------~~~~i~~g~~~~~--p~~~  285 (329)
T 4aoj_A          227 MPPES-ILYRKFTTESDVWS--FGVVLWEIFTYGKQPW-YQLSNTE---------------AIDCITQGRELER--PRAC  285 (329)
T ss_dssp             CCHHH-HTTCCCCHHHHHHH--HHHHHHHHHTTSCCTT-CSSCHHH---------------HHHHHHHTCCCCC--CTTC
T ss_pred             cChhh-hcCCCCCccccccc--hHHHHHHHHcCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--cccc
Confidence            79999 88889999999999  9999999998 89999 5443322               3344444444444  5578


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++++.+|+.+||..||++|||+.++++
T Consensus       286 ~~~~~~li~~cl~~dP~~RPs~~ei~~  312 (329)
T 4aoj_A          286 PPEVYAIMRGCWQREPQQRHSIKDVHA  312 (329)
T ss_dssp             CHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred             cHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            899999999999999999999999864

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.67  E-value=9.9e-17  Score=113.49  Aligned_cols=93  Identities=22%  Similarity=0.329  Sum_probs=68.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +. ..++.++|+||  +|++++++++|..|| .......               ...............+...+
T Consensus       197 ~aPE~-~~-~~~~~~~Di~s--lG~~l~~l~~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  256 (290)
T 1t4h_A          197 MAPEM-YE-EKYDESVDVYA--FGMCMLEMATSEYPY-SECQNAA---------------QIYRRVTSGVKPASFDKVAI  256 (290)
T ss_dssp             CCGGG-GG-TCCCTHHHHHH--HHHHHHHHHHSSCTT-TTCSSHH---------------HHHHHHTTTCCCGGGGGCCC
T ss_pred             CCHHH-Hh-ccCCCcchHHH--HHHHHHHHHhCCCCC-CCcCcHH---------------HHHHHHhccCCccccCCCCC
Confidence            58998 54 45899999999  999999999999999 4433222               22222222222222244567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      +.+.+++.+||..||.+||++.++++||||+..
T Consensus       257 ~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          257 PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence            899999999999999999999999999999853

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.67  E-value=1.5e-17  Score=119.41  Aligned_cols=84  Identities=12%  Similarity=0.244  Sum_probs=68.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++||||  +|+++|||++ |+.|| .+.+...               ....+.....+..  |...
T Consensus       197 mAPE~-~~~~~~~~k~DVwS--~Gvvl~Ellt~G~~Pf-~~~~~~~---------------~~~~i~~~~~~~~--p~~~  255 (299)
T 4asz_A          197 MPPES-IMYRKFTTESDVWS--LGVVLWEIFTYGKQPW-YQLSNNE---------------VIECITQGRVLQR--PRTC  255 (299)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTTCCTT-TTSCHHH---------------HHHHHHHTCCCCC--CTTC
T ss_pred             cCHHH-HcCCCCCchhhHHH--HHHHHHHHHcCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--Cccc
Confidence            79999 88889999999999  9999999998 89999 5543322               3444444444444  5568


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      ++++.+|+.+||..||++|||++++.
T Consensus       256 ~~~~~~li~~cl~~dP~~RPs~~~i~  281 (299)
T 4asz_A          256 PQEVYELMLGCWQREPHMRKNIKGIH  281 (299)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             hHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            89999999999999999999999984

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.67  E-value=4.2e-17  Score=117.72  Aligned_cols=94  Identities=18%  Similarity=0.319  Sum_probs=72.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc--hhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK--EKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   78 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.....               ....+.... ..+.  ....
T Consensus       184 ~aPE~-~~~~~~~~~~Diws--lG~il~~ll~g~~pf-~~~~~~~---------------~~~~~~~~~-~~~~~~~~~~  243 (326)
T 2y0a_A          184 VAPEI-VNYEPLGLEADMWS--IGVITYILLSGASPF-LGDTKQE---------------TLANVSAVN-YEFEDEYFSN  243 (326)
T ss_dssp             CCHHH-HTTCCCCTHHHHHH--HHHHHHHHHHSCCSS-CCSSHHH---------------HHHHHHHTC-CCCCHHHHTT
T ss_pred             CCcee-ecCCCCCcHHHHHH--HHHHHHHHHHCcCCC-CCCCHHH---------------HHHHHHhcC-CCcCcccccc
Confidence            68999 77888999999999  999999999999999 5433221               222222221 2221  1245


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      .+..+.+|+.+||..||.+|||+.++++||||+...
T Consensus       244 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence            788999999999999999999999999999998643

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.67  E-value=6.8e-17  Score=118.91  Aligned_cols=110  Identities=23%  Similarity=0.382  Sum_probs=66.8

Q ss_pred             CCCccccCC--CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhH---HhhHHH---------------
Q psy9738           1 MAPEGGHHR--KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLF---ILSCRQ---------------   60 (133)
Q Consensus         1 maPE~~~~~--~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~---------------   60 (133)
                      ||||+ +.+  ..|+.++||||  +||++++|++|..|| .+.+.......+....   +.....               
T Consensus       202 ~aPE~-~~~~~~~~~~~~Diws--lG~il~el~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (389)
T 3gni_B          202 LSPEV-LQQNLQGYDAKSDIYS--VGITACELANGHVPF-KDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVA  277 (389)
T ss_dssp             SCHHH-HSTTSSCBCTHHHHHH--HHHHHHHHHHSSCTT-TTCCSTTHHHHC----------------------------
T ss_pred             cCHHH-HhccCCCCCcHhHHHH--HHHHHHHHHHCCCCC-CCCCHHHHHHHHhcCCCCcccccccccccccccccccccc
Confidence            68999 655  67899999999  999999999999999 5543322000000000   000000               


Q ss_pred             --HHHH-h-------hhCCCCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          61 --ALYL-I-------ATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        61 --~~~~-~-------~~~~~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                        .... .       .....+....+..+++.+.+|+.+||..||.+|||+.++|+||||+...
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~  341 (389)
T 3gni_B          278 NSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  341 (389)
T ss_dssp             ----------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred             ccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence              0000 0       0000000111344678899999999999999999999999999998643

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.67  E-value=1.4e-17  Score=120.05  Aligned_cols=85  Identities=12%  Similarity=0.164  Sum_probs=67.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.++.|+.++||||  +|+++|||++ |..|| .+.+...               ....+.....++.  +...
T Consensus       214 mAPE~-l~~~~~s~ksDVwS--fGvvl~El~t~g~~Pf-~~~~~~~---------------~~~~i~~~~~~~~--p~~~  272 (308)
T 4gt4_A          214 MAPEA-IMYGKFSIDSDIWS--YGVVLWEVFSYGLQPY-CGYSNQD---------------VVEMIRNRQVLPC--PDDC  272 (308)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTTCCTT-TTCCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cCHHH-HhCCCCCccchhhh--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--cccc
Confidence            79999 77889999999999  9999999998 89999 5443222               3333443333333  5578


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+|||+.++++
T Consensus       273 ~~~~~~li~~C~~~dP~~RPs~~ei~~  299 (308)
T 4gt4_A          273 PAWVYALMIECWNEFPSRRPRFKDIHS  299 (308)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            899999999999999999999999874

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.66  E-value=3.9e-17  Score=122.83  Aligned_cols=93  Identities=23%  Similarity=0.429  Sum_probs=72.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++||||  +|+++++|++|.+|| .+.+...               ....+..... ...+....+
T Consensus       180 ~APE~-l~~~~~~~~~DIwS--lGvilyell~G~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  240 (444)
T 3soa_A          180 LSPEV-LRKDPYGKPVDLWA--CGVILYILLVGYPPF-WDEDQHR---------------LYQQIKAGAYDFPSPEWDTV  240 (444)
T ss_dssp             CCHHH-HTTCCBCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH---------------HHHHHHHTCCCCCTTTTTTS
T ss_pred             CCHHH-hcCCCCCCccccHH--HHHHHHHHHhCCCCC-CCccHHH---------------HHHHHHhCCCCCCccccccC
Confidence            68999 77888999999999  999999999999999 5543222               2222222221 111112467


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ++.+.+|+.+||..||.+|||+.++|+||||+.
T Consensus       241 s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          241 TPEAKDLINKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence            899999999999999999999999999999964

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.66  E-value=2.9e-17  Score=120.78  Aligned_cols=95  Identities=22%  Similarity=0.303  Sum_probs=66.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh--CCCC-------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT--NKKP-------   71 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------   71 (133)
                      ||||+ +.+..|+.++||||  +|+++++|++|..|| .+.+...               ....+..  ..++       
T Consensus       225 ~aPE~-~~~~~~~~~~DiwS--lG~il~elltg~~pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  285 (382)
T 2vx3_A          225 RSPEV-LLGMPYDLAIDMWS--LGCILVEMHTGEPLF-SGANEVD---------------QMNKIVEVLGIPPAHILDQA  285 (382)
T ss_dssp             CCHHH-HTTCCCCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHHHCSCCHHHHTTC
T ss_pred             cChHH-HcCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHHHhCCCCHHHHHhh
Confidence            68999 77788999999999  999999999999999 5443211               1111100  0000       


Q ss_pred             -------------------------Ccchh---------------------------hhhcHHHHHHHHHHhhhcccccC
Q psy9738          72 -------------------------EIKEK---------------------------EKLSQIFQDFLDQCLEEEVETRA   99 (133)
Q Consensus        72 -------------------------~~~~~---------------------------~~~~~~~~~ll~~~L~~~p~~R~   99 (133)
                                               ....+                           ....+.+.+|+.+||..||.+||
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rp  365 (382)
T 2vx3_A          286 PKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRI  365 (382)
T ss_dssp             TTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSC
T ss_pred             HHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCC
Confidence                                     00000                           00124789999999999999999


Q ss_pred             CHHHHhcCcccccCC
Q psy9738         100 SASLLLKHPFLKIAR  114 (133)
Q Consensus       100 s~~ell~h~~~~~~~  114 (133)
                      |+.++|+||||+...
T Consensus       366 ta~e~L~hp~f~~~~  380 (382)
T 2vx3_A          366 QPYYALQHSFFKKTA  380 (382)
T ss_dssp             CHHHHTTSGGGCC--
T ss_pred             CHHHHhcCcccccCC
Confidence            999999999998643

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.66  E-value=3.8e-17  Score=123.39  Aligned_cols=103  Identities=16%  Similarity=0.193  Sum_probs=68.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhH------------HHHHHHhhhC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC------------RQALYLIATN   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~   68 (133)
                      +|||+ +.+..|+.++||||  +||++++|++|+.|| .+.+...+     ...+...            ..........
T Consensus       230 ~aPE~-~~~~~~~~~~DiwS--lG~il~ell~g~~pF-~g~~~~~~-----~~~i~~~lg~p~~~~~~~~~~~~~~~~~~  300 (464)
T 3ttj_A          230 RAPEV-ILGMGYKENVDIWS--VGCIMGEMVRHKILF-PGRDYIDQ-----WNKVIEQLGTPCPEFMKKLQPTVRNYVEN  300 (464)
T ss_dssp             CCHHH-HTTCCCCTTHHHHH--HHHHHHHHHHSSCSS-CCSSHHHH-----HHHHHHHHCSCCHHHHTTSCHHHHHHHTT
T ss_pred             cCHHH-HcCCCCCHHHHHHH--HHHHHHHHHhCCCCC-CCCCHHHH-----HHHHHHhcCCCCHHHHHHcchhhhhHhhc
Confidence            68999 77789999999999  999999999999999 65432210     0000000            0000000000


Q ss_pred             CC--CCcchh---------------hhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          69 KK--PEIKEK---------------EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        69 ~~--~~~~~~---------------~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      .+  .....+               ...++.+.+|+.+||..||.+|+|++++|+||||+.
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             SCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             ccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence            00  000001               112577899999999999999999999999999975

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.66  E-value=7e-17  Score=114.90  Aligned_cols=108  Identities=31%  Similarity=0.536  Sum_probs=82.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .......               ....+.....+.+  +...+
T Consensus       186 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  244 (303)
T 3a7i_A          186 MAPEV-IKQSAYDSKADIWS--LGITAIELARGEPPH-SELHPMK---------------VLFLIPKNNPPTL--EGNYS  244 (303)
T ss_dssp             CCHHH-HTTCCBCTHHHHHH--HHHHHHHHHHSSCTT-TTSCHHH---------------HHHHHHHSCCCCC--CSSCC
T ss_pred             cCHHH-HhcCCCCchhhhHH--HHHHHHHHccCCCCC-CCcCHHH---------------HHHHhhcCCCCCC--ccccC
Confidence            58999 77788899999999  999999999999999 4332221               2223333333333  34678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCC-CCCChhHHHHHHHHH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR-PLASLTPLIMAAKEA  129 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~-~~~~~~~~~~~~~~~  129 (133)
                      ..+.+++.+||..||.+||++.++++||||.... ....+..+++..++.
T Consensus       245 ~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~  294 (303)
T 3a7i_A          245 KPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRW  294 (303)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCCCGGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCCccHHHHHHHHHHHHh
Confidence            8999999999999999999999999999996543 445567777776654

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.66  E-value=1.2e-16  Score=115.19  Aligned_cols=93  Identities=19%  Similarity=0.230  Sum_probs=69.9

Q ss_pred             CCCccccCCCCC-CCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQY-GPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~-~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..+ +.++|+||  +|+++++|++|..|| .+.....               ..................+
T Consensus       174 ~aPE~-~~~~~~~~~~~Diws--lG~il~~ll~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~  234 (323)
T 3tki_A          174 VAPEL-LKRREFHAEPVDVWS--CGIVLTAMLAGELPW-DQPSDSC---------------QEYSDWKEKKTYLNPWKKI  234 (323)
T ss_dssp             SCHHH-HHCSSBCHHHHHHHH--HHHHHHHHHHSSCSC-SSSCTTS---------------HHHHHHHTTCTTSTTGGGS
T ss_pred             cCcHH-hccCCCCCCcccHHH--HHHHHHHHHhCCCCC-CCCchHH---------------HHHHHHhcccccCCccccC
Confidence            58998 555554 67899999  999999999999999 5444332               2222222222222223567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      +..+.+|+.+||..||.+|||+.++++||||+.
T Consensus       235 ~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~  267 (323)
T 3tki_A          235 DSAPLALLHKILVENPSARITIPDIKKDRWYNK  267 (323)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhhChhhcc
Confidence            899999999999999999999999999999974

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.66  E-value=9.5e-17  Score=116.51  Aligned_cols=108  Identities=18%  Similarity=0.237  Sum_probs=73.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCc-ch----
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEI-KE----   75 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----   75 (133)
                      +|||++.....|+.++||||  +|+++++|++|..|| .+.....            ....+........+.. +.    
T Consensus       195 ~aPE~~~~~~~~~~~~Diws--lG~il~ell~g~~pf-~~~~~~~------------~~~~i~~~~~~~~~~~~~~~~~~  259 (351)
T 3mi9_A          195 RPPELLLGERDYGPPIDLWG--AGCIMAEMWTRSPIM-QGNTEQH------------QLALISQLCGSITPEVWPNVDNY  259 (351)
T ss_dssp             CCHHHHTTCCSCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH------------HHHHHHHHHCCCCTTTSTTGGGC
T ss_pred             cCchhhcCCCCCCcHhHHHH--HHHHHHHHHhCCCCC-CCCChHH------------HHHHHHHHhCCCChhhccccccc
Confidence            68998334466899999999  999999999999999 5433211            0001111111111110 00    


Q ss_pred             ----------------h-----hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHH
Q psy9738          76 ----------------K-----EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLI  123 (133)
Q Consensus        76 ----------------~-----~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~  123 (133)
                                      .     ...++.+.+|+.+||..||.+|||+.++++||||+.......+...+
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~~  328 (351)
T 3mi9_A          260 ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKGML  328 (351)
T ss_dssp             GGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCCCCSHHHH
T ss_pred             hhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCcccccccc
Confidence                            0     01267789999999999999999999999999998877666655544

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.66  E-value=5e-17  Score=114.52  Aligned_cols=97  Identities=20%  Similarity=0.358  Sum_probs=73.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .+.....               ....+.... ..........
T Consensus       174 ~aPE~-~~~~~~~~~~Di~s--lG~~l~~l~~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  234 (284)
T 3kk8_A          174 LSPEV-LKKDPYSKPVDIWA--CGVILYILLVGYPPF-WDEDQHR---------------LYAQIKAGAYDYPSPEWDTV  234 (284)
T ss_dssp             CCHHH-HTTCCBCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHTCCCCCTTTTTTS
T ss_pred             cCchh-hcCCCCCcccchHH--HHHHHHHHHHCCCCC-CCCchhH---------------HHHHHHhccccCCchhhccc
Confidence            58999 77888999999999  999999999999999 5433221               222222211 1122122467


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  116 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~  116 (133)
                      ++.+.+|+.+||..||.+||++.++++||||+.....
T Consensus       235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~  271 (284)
T 3kk8_A          235 TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERV  271 (284)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCG
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhH
Confidence            8999999999999999999999999999999865443

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.66  E-value=1.9e-16  Score=117.40  Aligned_cols=98  Identities=17%  Similarity=0.284  Sum_probs=73.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc--hhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK--EKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   78 (133)
                      ||||+ +.+..|+.++||||  +|+++++|++|..|| .+.+.......           ....+... ...++  ....
T Consensus       230 ~aPE~-~~~~~~~~~~Diws--lG~il~ell~g~~pf-~~~~~~~~~~~-----------~~~~i~~~-~~~~~~~~~~~  293 (400)
T 1nxk_A          230 VAPEV-LGPEKYDKSCDMWS--LGVIMYILLCGYPPF-YSNHGLAISPG-----------MKTRIRMG-QYEFPNPEWSE  293 (400)
T ss_dssp             CCGGG-SCCCCSSSHHHHHH--HHHHHHHHHHSSCSC-CCCTTCSSCCS-----------HHHHHHHT-CCCCCTTTTTT
T ss_pred             cCHhh-cCCCCCCCcccHHH--HHHHHHHHHhCCCCC-CCCccccccHH-----------HHHHHHcC-cccCCCccccc
Confidence            68999 88889999999999  999999999999999 55443221100           11122221 11221  1245


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ++..+.+|+.+||..||.+|||+.++++||||....
T Consensus       294 ~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          294 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence            789999999999999999999999999999997543

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.66  E-value=2.3e-17  Score=120.93  Aligned_cols=86  Identities=15%  Similarity=0.224  Sum_probs=68.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHH-hhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYL-IATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   78 (133)
                      ||||+ +.+..|+.++||||  +||++|||++ |..|| .+.+...               .... +.....+..  |..
T Consensus       254 mAPE~-l~~~~y~~ksDVwS--~Gv~l~El~t~G~~Pf-~~~~~~~---------------~~~~~i~~g~~~~~--p~~  312 (353)
T 4ase_A          254 MAPET-IFDRVYTIQSDVWS--FGVLLWEIFSLGASPY-PGVKIDE---------------EFCRRLKEGTRMRA--PDY  312 (353)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHTTTSCCSS-TTCCCSH---------------HHHHHHHHTCCCCC--CTT
T ss_pred             cCHHH-HhcCCCCCcccEee--hHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHHcCCCCCC--Ccc
Confidence            89999 77889999999999  9999999997 89999 5544332               2222 223333333  556


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      .++++.+++.+||..||.+|||++++++|
T Consensus       313 ~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          313 TTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            78999999999999999999999999876

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.66  E-value=5.7e-17  Score=118.81  Aligned_cols=93  Identities=20%  Similarity=0.362  Sum_probs=71.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++|+||  +|+++|+|++|..|| .+.+...               ....+..... ........+
T Consensus       197 ~aPE~-~~~~~~~~~~Diws--lG~il~~ll~g~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  257 (362)
T 2bdw_A          197 LSPEV-LKKDPYSKPVDIWA--CGVILYILLVGYPPF-WDEDQHR---------------LYAQIKAGAYDYPSPEWDTV  257 (362)
T ss_dssp             CCHHH-HTTCCCCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHTCCCCCTTGGGGS
T ss_pred             cCHHH-HccCCCCchhhHHH--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHhCCCCCCcccccCC
Confidence            68999 77888999999999  999999999999999 5443221               2222222211 111123467


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ++.+.+|+.+||..||.+||++.++++||||..
T Consensus       258 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          258 TPEAKSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence            899999999999999999999999999999964

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.66  E-value=1.2e-16  Score=115.16  Aligned_cols=95  Identities=18%  Similarity=0.263  Sum_probs=72.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++|..|| .+.....               ....+.... ..........
T Consensus       200 ~aPE~-~~~~~~~~~~Diws--lG~il~~ll~g~~pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  260 (327)
T 3lm5_A          200 LAPEI-LNYDPITTATDMWN--IGIIAYMLLTHTSPF-VGEDNQE---------------TYLNISQVNVDYSEETFSSV  260 (327)
T ss_dssp             CCHHH-HTTCCCCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHTCCCCCTTTTTTS
T ss_pred             cCCee-ecCCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCchH---------------HHHHHHhcccccCchhhccc
Confidence            68999 77888999999999  999999999999999 5433221               222222211 1121113457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      +..+.+|+.+||..||.+|||+.++++||||+...
T Consensus       261 ~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~  295 (327)
T 3lm5_A          261 SQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD  295 (327)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccc
Confidence            89999999999999999999999999999998654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.65  E-value=2.7e-17  Score=117.37  Aligned_cols=95  Identities=19%  Similarity=0.213  Sum_probs=67.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh----CCCCCc---
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT----NKKPEI---   73 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---   73 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| .+.+...               ....+..    ......   
T Consensus       186 ~aPE~-~~~~~~~~~~Diws--lG~il~~l~~g~~pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  246 (308)
T 3g33_A          186 RAPEV-LLQSTYATPVDMWS--VGCIFAEMFRRKPLF-CGNSEAD---------------QLGKIFDLIGLPPEDDWPRD  246 (308)
T ss_dssp             CCHHH-HHTSCCCSTHHHHH--HHHHHHHTTTSSCSC-CCSSHHH---------------HHHHHHHHHCCCCTTTSCSS
T ss_pred             cCchH-HcCCCCCchHHHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHHHhCCCChhhccch
Confidence            68999 77788999999999  999999999999999 5443221               1111111    000000   


Q ss_pred             -----------------chhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          74 -----------------KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        74 -----------------~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                                       ......+..+.+|+.+||..||.+|||+.++|+||||+...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence                             00124678899999999999999999999999999998654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.65  E-value=4.2e-17  Score=121.95  Aligned_cols=105  Identities=26%  Similarity=0.389  Sum_probs=67.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHH----HH-------HHhhh-C
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ----AL-------YLIAT-N   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~-~   68 (133)
                      ||||+ +.+..|+.++||||  +||++++|++|.+|| .+.+... .+    ..+.....    ..       ..... .
T Consensus       266 ~aPE~-~~~~~~~~~~DiwS--lG~il~elltG~~pf-~~~~~~~-~l----~~i~~~~~~p~~~~~~~~~~~~~~~~~~  336 (429)
T 3kvw_A          266 RAPEV-ILGARYGMPIDMWS--LGCILAELLTGYPLL-PGEDEGD-QL----ACMIELLGMPSQKLLDASKRAKNFVSSK  336 (429)
T ss_dssp             CCHHH-HHTBCCCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH-HH----HHHHHHHCCCCHHHHHTBTTHHHHBCTT
T ss_pred             cChHH-HhCCCCCchHHHHh--HHHHHHHHHhCCCCC-CCCCHHH-HH----HHHHHHcCCCCHHHHHhhhhhhhccCCC
Confidence            68999 77788999999999  999999999999999 5543211 00    00000000    00       00000 0


Q ss_pred             CC-----------------------------CCcch-----hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          69 KK-----------------------------PEIKE-----KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        69 ~~-----------------------------~~~~~-----~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ..                             +....     +...++.+.+|+.+||..||.+|||+.++|+||||+...
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~  416 (429)
T 3kvw_A          337 GYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL  416 (429)
T ss_dssp             SCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC---
T ss_pred             CCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCC
Confidence            00                             00000     012367899999999999999999999999999998643

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.65  E-value=1.5e-16  Score=111.81  Aligned_cols=92  Identities=23%  Similarity=0.351  Sum_probs=58.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .......               ....+.. ....+  +...+
T Consensus       179 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~-~~~~~--~~~~~  236 (278)
T 3cok_A          179 ISPEI-ATRSAHGLESDVWS--LGCMFYTLLIGRPPF-DTDTVKN---------------TLNKVVL-ADYEM--PSFLS  236 (278)
T ss_dssp             --------------CTHHHH--HHHHHHHHHHSSCSS-CCCSCC--------------------CCS-SCCCC--CTTSC
T ss_pred             CCcch-hcCCCCCchhhHHH--HHHHHHHHHhCCCCC-CChhHHH---------------HHHHHhh-cccCC--ccccC
Confidence            58999 77778899999999  999999999999999 5433222               1222111 11222  45678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ..+.+++.+||..||.+||++.++++||||....
T Consensus       237 ~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          237 IEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred             HHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence            8999999999999999999999999999998644

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.65  E-value=8.7e-17  Score=113.85  Aligned_cols=94  Identities=20%  Similarity=0.274  Sum_probs=67.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh---CC-CC-----
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT---NK-KP-----   71 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~-----   71 (133)
                      ||||++.....++.++|+||  +|+++++|++|..|| .+.+...               ....+..   .. ..     
T Consensus       167 ~aPE~~~~~~~~~~~~Diws--lG~il~~l~~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  228 (288)
T 1ob3_A          167 RAPDVLMGSKKYSTTIDIWS--VGCIFAEMVNGTPLF-PGVSEAD---------------QLMRIFRILGTPNSKNWPNV  228 (288)
T ss_dssp             CCHHHHTTCCSCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH---------------HHHHHHHHHCCCCTTTSTTG
T ss_pred             cCchheeCCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHHHHCCCChhhchhh
Confidence            68999334456899999999  999999999999999 5433211               1111100   00 00     


Q ss_pred             --------Cc------c---hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          72 --------EI------K---EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        72 --------~~------~---~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                              .+      +   .....+..+.+|+.+||..||.+|||+.++++||||+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             GGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             hcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence                    00      0   01236788999999999999999999999999999985

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.65  E-value=7.4e-17  Score=116.42  Aligned_cols=96  Identities=20%  Similarity=0.256  Sum_probs=68.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh----CCCCCcc--
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT----NKKPEIK--   74 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--   74 (133)
                      +|||++.....|+.++||||  +|++++++++|..|| .+.....               ....+..    .......  
T Consensus       204 ~aPE~~~~~~~~~~~~Diws--lG~il~ell~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  265 (329)
T 3gbz_A          204 RPPEILLGSRHYSTSVDIWS--IACIWAEMLMKTPLF-PGDSEID---------------QLFKIFEVLGLPDDTTWPGV  265 (329)
T ss_dssp             CCHHHHTTCCCCCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHHHCCCCTTTSTTG
T ss_pred             cCHHHhcCCCCCCcHHHHHH--HHHHHHHHHHCCCCc-CCCCHHH---------------HHHHHHHHhCCCchhhhhhh
Confidence            68999333456899999999  999999999999999 5443221               1111111    0000000  


Q ss_pred             ---------------------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          75 ---------------------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        75 ---------------------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                                           .+...+..+.+|+.+||..||.+|||+.++++||||+...
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND  326 (329)
T ss_dssp             GGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred             hhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCC
Confidence                                 0122578899999999999999999999999999998653

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.65  E-value=5.9e-17  Score=115.16  Aligned_cols=91  Identities=18%  Similarity=0.357  Sum_probs=67.4

Q ss_pred             CCCccccCCCC---CCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhh
Q psy9738           1 MAPEGGHHRKQ---YGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKE   77 (133)
Q Consensus         1 maPE~~~~~~~---~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (133)
                      ||||+ +.+..   ++.++|+||  +|+++++|++|..|| .+.....               ....+. ......+...
T Consensus       204 ~aPE~-~~~~~~~~~~~~~Di~s--lG~~l~~l~~g~~pf-~~~~~~~---------------~~~~~~-~~~~~~~~~~  263 (298)
T 2zv2_A          204 MAPES-LSETRKIFSGKALDVWA--MGVTLYCFVFGQCPF-MDERIMC---------------LHSKIK-SQALEFPDQP  263 (298)
T ss_dssp             CCGGG-CCTTCCCEESHHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHH-HCCCCCCSSS
T ss_pred             cChhh-hccCCCCCCCchhhhHh--HHHHHHHHHHCCCCC-CCccHHH---------------HHHHHh-cccCCCCCcc
Confidence            68999 65443   367899999  999999999999999 4432111               112222 2222232234


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      ..+..+.+++.+||..||.+||++.++++||||+
T Consensus       264 ~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          264 DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             CCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             ccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            5789999999999999999999999999999985

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.65  E-value=7.8e-17  Score=116.09  Aligned_cols=99  Identities=20%  Similarity=0.255  Sum_probs=68.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCc------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEI------   73 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------   73 (133)
                      +|||++.....|+.++|+||  +|+++++|++|..|| .+.+...            ............. ..+      
T Consensus       167 ~aPE~~~~~~~~~~~~Diws--lG~il~~l~~g~~pf-~~~~~~~------------~~~~i~~~~~~~~~~~~~~~~~~  231 (324)
T 3mtl_A          167 RPPDILLGSTDYSTQIDMWG--VGCIFYEMATGRPLF-PGSTVEE------------QLHFIFRILGTPTEETWPGILSN  231 (324)
T ss_dssp             CCHHHHTTCCCCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH------------HHHHHHHHHCCCCTTTSTTGGGC
T ss_pred             cChhhhcCCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCCHHH------------HHHHHHHHhCCCChHhchhhhcc
Confidence            68998334467899999999  999999999999999 5433211            0001111110000 000      


Q ss_pred             -----------------chhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          74 -----------------KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        74 -----------------~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                                       .....+++.+.+|+.+||..||.+|||+.++++||||....
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  289 (324)
T 3mtl_A          232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG  289 (324)
T ss_dssp             HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcc
Confidence                             01124578899999999999999999999999999997543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.65  E-value=1.5e-16  Score=114.88  Aligned_cols=101  Identities=16%  Similarity=0.193  Sum_probs=64.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc--hhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK--EKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   78 (133)
                      ||||+ +.+..|+.++|+||  +|++++++++|..|| .+.+.......        .......+. .....+.  ....
T Consensus       176 ~aPE~-~~~~~~~~~~Diws--lG~il~~ll~g~~pf-~~~~~~~~~~~--------~~~~~~~i~-~~~~~~~~~~~~~  242 (325)
T 3kn6_A          176 AAPEL-LNQNGYDESCDLWS--LGVILYTMLSGQVPF-QSHDRSLTCTS--------AVEIMKKIK-KGDFSFEGEAWKN  242 (325)
T ss_dssp             ---------CCCCHHHHHHH--HHHHHHHHHHSSCTT-C-------CCC--------HHHHHHHHT-TTCCCCCSHHHHT
T ss_pred             cCHHH-hcCCCCCCccchHH--HHHHHHHHHhCCCCC-CCCcccccccc--------HHHHHHHHH-cCCCCCCcccccC
Confidence            68999 88888999999999  999999999999999 54332110000        001222222 2222221  2245


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      +++.+.+|+.+||..||.+||++.++++||||+...
T Consensus       243 ~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~  278 (325)
T 3kn6_A          243 VSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGS  278 (325)
T ss_dssp             SCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTC
T ss_pred             CCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCc
Confidence            789999999999999999999999999999998654

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.65  E-value=5.5e-17  Score=116.55  Aligned_cols=102  Identities=23%  Similarity=0.305  Sum_probs=68.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC----------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK----------   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------   70 (133)
                      ||||++.....|+.++|+||  +|+++++|++|..|| .+.+...            ....+........          
T Consensus       175 ~aPE~~~~~~~~~~~~Diws--lG~il~el~~g~~pf-~~~~~~~------------~~~~i~~~~~~~~~~~~~~~~~~  239 (317)
T 2pmi_A          175 RAPDVLMGSRTYSTSIDIWS--CGCILAEMITGKPLF-PGTNDEE------------QLKLIFDIMGTPNESLWPSVTKL  239 (317)
T ss_dssp             CCHHHHTTCCCCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH------------HHHHHHHHHCSCCTTTCGGGGGC
T ss_pred             cCchHhhCCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCChHH------------HHHHHHHHhCCCChhHhhhhhhh
Confidence            68999333456899999999  999999999999999 5443211            0000111000000          


Q ss_pred             ------------CCcc------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCC
Q psy9738          71 ------------PEIK------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  117 (133)
Q Consensus        71 ------------~~~~------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~  117 (133)
                                  ..+.      .+...+..+.+|+.+||..||.+|||+.++++||||+.....+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~  304 (317)
T 2pmi_A          240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHA  304 (317)
T ss_dssp             TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC--
T ss_pred             hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccchh
Confidence                        0000      0123578899999999999999999999999999998755443

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.65  E-value=9.9e-17  Score=116.70  Aligned_cols=95  Identities=21%  Similarity=0.242  Sum_probs=65.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCC---------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKP---------   71 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------   71 (133)
                      ||||+ +.+..|+.++||||  +|+++++|++|..|| .+.+... ..           ..+.......+.         
T Consensus       226 ~aPE~-~~~~~~~~~~Diws--lG~il~ell~g~~pf-~~~~~~~-~~-----------~~~~~~~~~~p~~~~~~~~~~  289 (360)
T 3llt_A          226 RAPEV-ILNLGWDVSSDMWS--FGCVLAELYTGSLLF-RTHEHME-HL-----------AMMESIIQPIPKNMLYEATKT  289 (360)
T ss_dssp             CCHHH-HTTCCCCTTHHHHH--HHHHHHHHHHSSCSC-CCSSHHH-HH-----------HHHHHHTCCCCHHHHHHHTTS
T ss_pred             cCcHH-HcCCCCCCccchHH--HHHHHHHHHHCCCCC-CCCcHHH-HH-----------HHHHHhcCCCCHHHHhhhhhc
Confidence            68999 77888999999999  999999999999999 5433211 00           000000000000         


Q ss_pred             -------------Ccc------------------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          72 -------------EIK------------------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        72 -------------~~~------------------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                                   ..+                  .....++.+.+|+.+||..||.+|||+.++|+||||+
T Consensus       290 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          290 NGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             GGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             cCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                         000                  0011236788999999999999999999999999985

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.65  E-value=7.6e-17  Score=115.01  Aligned_cols=118  Identities=21%  Similarity=0.377  Sum_probs=69.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhh--HHhhHHHHHHHh---hh-CCCCC--
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYL--FILSCRQALYLI---AT-NKKPE--   72 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~-~~~~~--   72 (133)
                      +|||++.....++.++|+||  +|++++++++|..|| .+.........+...  ............   .. ...+.  
T Consensus       169 ~aPE~~~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (311)
T 4agu_A          169 RSPELLVGDTQYGPPVDVWA--IGCVFAELLSGVPLW-PGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPE  245 (311)
T ss_dssp             CCHHHHHTCSCCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCS
T ss_pred             cChHHHhcCCCCCcchhhHH--HHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCcc
Confidence            58998444577899999999  999999999999999 543322100000000  000000000000   00 00000  


Q ss_pred             -cc----hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhH
Q psy9738          73 -IK----EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTP  121 (133)
Q Consensus        73 -~~----~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~  121 (133)
                       ..    .....+..+.+|+.+||..||.+|||++++++||||+.......+..
T Consensus       246 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~~~  299 (311)
T 4agu_A          246 DMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDLAK  299 (311)
T ss_dssp             SCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-------
T ss_pred             ccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccCHHHHHH
Confidence             00    00246788999999999999999999999999999997665554433

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.65  E-value=9.8e-17  Score=118.71  Aligned_cols=95  Identities=22%  Similarity=0.283  Sum_probs=72.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+..... ........+
T Consensus       217 ~aPE~-~~~~~~~~~~DiwS--lG~il~elltg~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  277 (387)
T 1kob_A          217 AAPEI-VDREPVGFYTDMWA--IGVLGYVLLSGLSPF-AGEDDLE---------------TLQNVKRCDWEFDEDAFSSV  277 (387)
T ss_dssp             CCHHH-HTTCCBCHHHHHHH--HHHHHHHHHHSCCSS-CCSSHHH---------------HHHHHHHCCCCCCSSTTTTS
T ss_pred             cCchh-ccCCCCCCcccEee--HhHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhCCCCCCccccccC
Confidence            68999 77888999999999  999999999999999 5443222               2222222211 111112457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ++.+.+|+.+||..||.+|||+.++++||||+...
T Consensus       278 s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          278 SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence            89999999999999999999999999999998643

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.65  E-value=2.5e-17  Score=118.85  Aligned_cols=93  Identities=24%  Similarity=0.334  Sum_probs=72.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc--hhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK--EKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   78 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+.... ..+.  ....
T Consensus       170 ~aPE~-~~~~~~~~~~Diws--lG~il~~ll~g~~pf-~~~~~~~---------------~~~~i~~~~-~~~~~~~~~~  229 (321)
T 1tki_A          170 YAPEV-HQHDVVSTATDMWS--LGTLVYVLLSGINPF-LAETNQQ---------------IIENIMNAE-YTFDEEAFKE  229 (321)
T ss_dssp             SCHHH-HTTCEECHHHHHHH--HHHHHHHHHHSSCTT-CCSSHHH---------------HHHHHHHTC-CCCCHHHHTT
T ss_pred             cCcHH-hcCCCCCchhhHHH--HHHHHHHHHhCCCCC-cCCCHHH---------------HHHHHHcCC-CCCChhhhcc
Confidence            68999 77777899999999  999999999999999 5443222               223333222 2221  1245


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ++..+.+|+.+||..||.+|||+.++++||||+..
T Consensus       230 ~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          230 ISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence            78999999999999999999999999999999753

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.64  E-value=9.1e-17  Score=113.71  Aligned_cols=93  Identities=23%  Similarity=0.246  Sum_probs=67.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +. ..++.++|+||  +|+++++|++|..|| .+.....               ...................+
T Consensus       193 ~aPE~-~~-~~~~~~~Di~s--lG~il~~ll~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  252 (285)
T 3is5_A          193 MAPEV-FK-RDVTFKCDIWS--AGVVMYFLLTGCLPF-TGTSLEE---------------VQQKATYKEPNYAVECRPLT  252 (285)
T ss_dssp             CCHHH-HT-TCCCHHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHCCCCCCC--CCCC
T ss_pred             CChHH-hc-cCCCcccCeeh--HHHHHHHHHhCCCCC-CCCCHHH---------------HHhhhccCCcccccccCcCC
Confidence            58888 54 56788999999  999999999999999 5432111               12222222211111123368


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      +.+.+|+.+||..||.+||++.++++||||+.+
T Consensus       253 ~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~a  285 (285)
T 3is5_A          253 PQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA  285 (285)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC-
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCHHhhcC
Confidence            899999999999999999999999999999853

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.64  E-value=7.6e-17  Score=113.50  Aligned_cols=92  Identities=15%  Similarity=0.286  Sum_probs=71.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .+.....               ....+ ......+  +...+
T Consensus       174 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~-~~~~~~~--~~~~~  231 (279)
T 3fdn_A          174 LPPEM-IEGRMHDEKVDLWS--LGVLCYEFLVGKPPF-EANTYQE---------------TYKRI-SRVEFTF--PDFVT  231 (279)
T ss_dssp             CCHHH-HTTCCCCTTHHHHH--HHHHHHHHHHSSCTT-CCSSHHH---------------HHHHH-HHTCCCC--CTTSC
T ss_pred             cCHhH-hccCCCCccchhHh--HHHHHHHHHHCCCCC-CCCcHHH---------------HHHHH-HhCCCCC--CCcCC
Confidence            58998 77788899999999  999999999999999 4332111               12222 2222233  44578


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ..+.+|+.+||..||.+||++.++++||||+...
T Consensus       232 ~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~  265 (279)
T 3fdn_A          232 EGARDLISRLLKHNPSQRPMLREVLEHPWITANS  265 (279)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHC
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHhhCccccCCc
Confidence            8999999999999999999999999999997644

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.64  E-value=1e-16  Score=120.14  Aligned_cols=91  Identities=22%  Similarity=0.425  Sum_probs=72.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| .+.+...               ....+.. ....+  +..++
T Consensus       316 ~aPE~-~~~~~~~~~~Diws--lG~il~ell~g~~Pf-~~~~~~~---------------~~~~i~~-~~~~~--p~~~~  373 (446)
T 4ejn_A          316 LAPEV-LEDNDYGRAVDWWG--LGVVMYEMMCGRLPF-YNQDHEK---------------LFELILM-EEIRF--PRTLG  373 (446)
T ss_dssp             CCHHH-HHTSCCCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHH-CCCCC--CTTSC
T ss_pred             cCHhh-cCCCCCCCccchhh--hHHHHHHHhhCCCCC-CCCCHHH---------------HHHHHHh-CCCCC--CccCC
Confidence            68999 77888999999999  999999999999999 5443221               2222222 22333  45678


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~~  113 (133)
                      +.+.+|+.+||..||.+|+     ++.++++||||+..
T Consensus       374 ~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          374 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            9999999999999999999     99999999999853

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.64  E-value=8.6e-17  Score=119.89  Aligned_cols=100  Identities=19%  Similarity=0.239  Sum_probs=72.1

Q ss_pred             CCCccccC---CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc--h
Q psy9738           1 MAPEGGHH---RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK--E   75 (133)
Q Consensus         1 maPE~~~~---~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~   75 (133)
                      ||||+ +.   ...|+.++|+||  +|+++++|++|..|| .......               ..............  .
T Consensus       308 ~aPE~-~~~~~~~~~~~~~Diws--lG~il~~lltg~~pf-~~~~~~~---------------~~~~~i~~~~~~~~~~~  368 (419)
T 3i6u_A          308 LAPEV-LVSVGTAGYNRAVDCWS--LGVILFICLSGYPPF-SEHRTQV---------------SLKDQITSGKYNFIPEV  368 (419)
T ss_dssp             CCTTT-TC----CTTHHHHHHHH--HHHHHHHHHHSSCSS-CCCSSSC---------------CHHHHHHTTCCCCCHHH
T ss_pred             cCcee-eecCCCCCCCchhhhHh--HHHHHHHHHHCCCCC-CCCcchH---------------HHHHHHhcCCCCCCchh
Confidence            68999 53   356788999999  999999999999999 5433222               12222222222221  1


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCCh
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL  119 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~  119 (133)
                      ....+..+.+|+.+||..||.+||++.++++||||+.......+
T Consensus       369 ~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~~~~  412 (419)
T 3i6u_A          369 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF  412 (419)
T ss_dssp             HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHHHHHHH
T ss_pred             hcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCChhHHHHH
Confidence            24578999999999999999999999999999999865433333

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.64  E-value=1.3e-16  Score=115.10  Aligned_cols=90  Identities=18%  Similarity=0.402  Sum_probs=72.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| .+.+...               ....+... ...+  +..++
T Consensus       170 ~aPE~-~~~~~~~~~~Diws--lG~il~ell~g~~pf-~~~~~~~---------------~~~~i~~~-~~~~--p~~~~  227 (318)
T 1fot_A          170 IAPEV-VSTKPYNKSIDWWS--FGILIYEMLAGYTPF-YDSNTMK---------------TYEKILNA-ELRF--PPFFN  227 (318)
T ss_dssp             CCHHH-HTTCCBCTTHHHHH--HHHHHHHHHHSSCTT-CCSSHHH---------------HHHHHHHC-CCCC--CTTSC
T ss_pred             cCHhH-hcCCCCCcccchhh--hHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhC-CCCC--CCCCC
Confidence            68999 78888999999999  999999999999999 5443222               22333332 2333  45678


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      ..+.+++.+||..||.+|+     +++++++||||+.
T Consensus       228 ~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~  264 (318)
T 1fot_A          228 EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE  264 (318)
T ss_dssp             HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred             HHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccC
Confidence            9999999999999999999     8999999999975

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.64  E-value=1.3e-16  Score=117.93  Aligned_cols=95  Identities=22%  Similarity=0.305  Sum_probs=68.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-------------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-------------   67 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------   67 (133)
                      +|||++.....|+.++|+||  +||++++|++|..|| .+.+...               .+..+..             
T Consensus       208 ~aPE~~~~~~~~~~~~DiwS--lG~il~ell~g~~pf-~~~~~~~---------------~l~~i~~~~g~p~~~~~~~~  269 (394)
T 4e7w_A          208 RAPELIFGATNYTTNIDIWS--TGCVMAELMQGQPLF-PGESGID---------------QLVEIIKVLGTPSREQIKTM  269 (394)
T ss_dssp             CCHHHHTTCSSCCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHHHCCCCHHHHHHH
T ss_pred             cCHHHHcCCCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHHHhCCCCHHHHHhh
Confidence            68998334456899999999  999999999999999 6543222               1111111             


Q ss_pred             ------CCCCCcc-------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          68 ------NKKPEIK-------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        68 ------~~~~~~~-------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                            ...+...       .+...++.+.+|+.+||..||.+|||+.++++||||+..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (394)
T 4e7w_A          270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL  328 (394)
T ss_dssp             CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred             ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence                  0000000       012367899999999999999999999999999999854

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.64  E-value=4.4e-17  Score=119.19  Aligned_cols=90  Identities=23%  Similarity=0.373  Sum_probs=72.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++|+|++|..|| .+.+...               ....+.. ....+  +..++
T Consensus       191 ~aPE~-~~~~~~~~~~Diws--lG~il~ell~G~~Pf-~~~~~~~---------------~~~~i~~-~~~~~--p~~~~  248 (353)
T 3txo_A          191 IAPEI-LQEMLYGPAVDWWA--MGVLLYEMLCGHAPF-EAENEDD---------------LFEAILN-DEVVY--PTWLH  248 (353)
T ss_dssp             CCHHH-HHHHHCTTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHH-CCCCC--CTTSC
T ss_pred             EChhh-cCCCCcCCccCCCc--chHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHc-CCCCC--CCCCC
Confidence            68999 77788999999999  999999999999999 5543322               2333333 23333  45678


Q ss_pred             HHHHHHHHHHhhhcccccCCH------HHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA------SLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~------~ell~h~~~~~  112 (133)
                      ..+.+|+.+||..||.+|+++      .++++||||+.
T Consensus       249 ~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~  286 (353)
T 3txo_A          249 EDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE  286 (353)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTT
T ss_pred             HHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccC
Confidence            999999999999999999998      89999999975

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.64  E-value=1.6e-16  Score=120.22  Aligned_cols=95  Identities=21%  Similarity=0.375  Sum_probs=73.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (133)
                      ||||+ +.+ .|+.++||||  +|+++++|++|..|| .+.+...               ....+.... ....+....+
T Consensus       190 ~aPE~-~~~-~~~~~~Diws--lG~il~~ll~g~~pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  249 (486)
T 3mwu_A          190 IAPEV-LRG-TYDEKCDVWS--AGVILYILLSGTPPF-YGKNEYD---------------ILKRVETGKYAFDLPQWRTI  249 (486)
T ss_dssp             CCGGG-GGS-CCCHHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHTCCCSCSGGGGGS
T ss_pred             CCHHH-hCC-CCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhCCCCCCCcccCCC
Confidence            68999 544 5899999999  999999999999999 6543322               233333322 2333334568


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                      ++.+++|+.+||..||.+|||+.++|+||||+....
T Consensus       250 s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (486)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCC
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcc
Confidence            899999999999999999999999999999976443

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.64  E-value=3.2e-17  Score=119.25  Aligned_cols=90  Identities=20%  Similarity=0.301  Sum_probs=69.2

Q ss_pred             CCCccccCCCCC-CCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQY-GPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~-~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..+ +.++|+||  +|+++++|++|..|| .+.....                ...........+  +...
T Consensus       174 ~aPE~-~~~~~~~~~~~Diws--lG~il~~ll~g~~Pf-~~~~~~~----------------~~~~i~~~~~~~--p~~~  231 (336)
T 3h4j_B          174 AAPEV-INGKLYAGPEVDVWS--CGIVLYVMLVGRLPF-DDEFIPN----------------LFKKVNSCVYVM--PDFL  231 (336)
T ss_dssp             SCGGG-SCCSGGGCHHHHHHH--HHHHHHHHHHSSCSS-BCSSSTT----------------CBCCCCSSCCCC--CTTS
T ss_pred             CCHHH-HcCCCCCCCccchhH--HHHHHHHHHhCCCCC-CCccHHH----------------HHHHHHcCCCCC--cccC
Confidence            68999 766666 67899999  999999999999999 5433221                111111122223  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ++.+.+|+.+||..||.+|||+.++++||||+.
T Consensus       232 s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~  264 (336)
T 3h4j_B          232 SPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV  264 (336)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence            899999999999999999999999999999975

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.64  E-value=8.9e-17  Score=121.41  Aligned_cols=93  Identities=24%  Similarity=0.337  Sum_probs=72.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (133)
                      ||||+ +.+ .|+.++||||  +|+++++|++|.+|| .+.+...               ....+.... ....+....+
T Consensus       195 ~aPE~-~~~-~~~~~~Diws--lG~il~~ll~g~~pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  254 (484)
T 3nyv_A          195 IAPEV-LHG-TYDEKCDVWS--TGVILYILLSGCPPF-NGANEYD---------------ILKKVEKGKYTFELPQWKKV  254 (484)
T ss_dssp             CCHHH-HHT-CCCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHCCCCCCSGGGGGS
T ss_pred             cCcee-ecC-CCCCcceeHH--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHcCCCCCCCcccccC
Confidence            68998 544 6899999999  999999999999999 5543322               233333332 2333334568


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ++.+++|+.+||..||.+|||+.++|+||||+..
T Consensus       255 s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          255 SESAKDLIRKMLTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence            9999999999999999999999999999999753

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.64  E-value=1.4e-16  Score=113.89  Aligned_cols=112  Identities=21%  Similarity=0.328  Sum_probs=70.0

Q ss_pred             CCCccccCC-----CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch
Q psy9738           1 MAPEGGHHR-----KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE   75 (133)
Q Consensus         1 maPE~~~~~-----~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (133)
                      +|||+ +..     ..++.++||||  +|+++++|++|..|| .+.......+..... ..................++.
T Consensus       188 ~aPE~-~~~~~~~~~~~~~~~Diws--lG~il~~l~~g~~pf-~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~  262 (316)
T 2ac3_A          188 MAPEV-VEAFSEEASIYDKRCDLWS--LGVILYILLSGYPPF-VGRCGSDCGWDRGEA-CPACQNMLFESIQEGKYEFPD  262 (316)
T ss_dssp             CCHHH-HHHTSHHHHHHTTTHHHHH--HHHHHHHHHHSSCSC-CCCCCSCSCC----C-CHHHHHHHHHHHHHCCCCCCH
T ss_pred             cChHH-hhcccccccCCCcccccHh--HHHHHHHHHHCCCCC-ccccccccccccccc-chhHHHHHHHHHhccCcccCc
Confidence            57888 432     45788999999  999999999999999 554322211110000 000011122222222233322


Q ss_pred             h--hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCC
Q psy9738          76 K--EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  117 (133)
Q Consensus        76 ~--~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~  117 (133)
                      .  ..++..+.+|+.+||..||.+|||+.++++||||+......
T Consensus       263 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~~  306 (316)
T 2ac3_A          263 KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN  306 (316)
T ss_dssp             HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC------
T ss_pred             hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCCcc
Confidence            1  35788999999999999999999999999999998755443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.64  E-value=6.5e-17  Score=117.88  Aligned_cols=91  Identities=25%  Similarity=0.403  Sum_probs=70.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc--hhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK--EKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   78 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| .+.. ..               ....+.... ..+.  ....
T Consensus       200 ~aPE~-~~~~~~~~~~Diws--lG~il~~ll~g~~pf-~~~~-~~---------------~~~~i~~~~-~~~~~~~~~~  258 (351)
T 3c0i_A          200 MAPEV-VKREPYGKPVDVWG--CGVILFILLSGCLPF-YGTK-ER---------------LFEGIIKGK-YKMNPRQWSH  258 (351)
T ss_dssp             CCHHH-HTTCCBCTHHHHHH--HHHHHHHHHHSSCSS-CSSH-HH---------------HHHHHHHTC-CCCCHHHHTT
T ss_pred             cCHHH-HcCCCCCchHhhHH--HHHHHHHHHHCCCCC-CCcH-HH---------------HHHHHHcCC-CCCCcccccc
Confidence            68999 77888999999999  999999999999999 5421 11               222222222 2221  1245


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ++..+.+|+.+||..||.+||++.++++||||+.
T Consensus       259 ~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence            7899999999999999999999999999999975

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.64  E-value=1.4e-16  Score=115.09  Aligned_cols=95  Identities=24%  Similarity=0.354  Sum_probs=71.7

Q ss_pred             CCCccccCC--CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhh
Q psy9738           1 MAPEGGHHR--KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKE   77 (133)
Q Consensus         1 maPE~~~~~--~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   77 (133)
                      +|||+ +.+  ..++.++|+||  +|+++++|++|..|| .+.....               ....+..... ...+...
T Consensus       241 ~aPE~-~~~~~~~~~~~~Diws--lG~il~el~~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~  301 (345)
T 3hko_A          241 VAPEV-LNTTNESYGPKCDAWS--AGVLLHLLLMGAVPF-PGVNDAD---------------TISQVLNKKLCFENPNYN  301 (345)
T ss_dssp             CCHHH-HTCSSSCCCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHCCCCTTSGGGG
T ss_pred             cCchh-hccCCCCCCcHHHHHH--HHHHHHHHHHCCCCC-CCCChHH---------------HHHHHHhcccccCCcccc
Confidence            68998 543  67889999999  999999999999999 5433222               2222222221 2222234


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ..++.+.+|+.+||..||.+||++.++++||||+...
T Consensus       302 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          302 VLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             GSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             cCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence            5789999999999999999999999999999998644

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.64  E-value=2.7e-16  Score=112.04  Aligned_cols=96  Identities=22%  Similarity=0.338  Sum_probs=72.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .+.....               ....+..... .........
T Consensus       174 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  234 (304)
T 2jam_A          174 VAPEV-LAQKPYSKAVDCWS--IGVITYILLCGYPPF-YEETESK---------------LFEKIKEGYYEFESPFWDDI  234 (304)
T ss_dssp             CCTTT-BSSCSCCHHHHHHH--HHHHHHHHHHSSCTT-TTSCHHH---------------HHHHHHHCCCCCCTTTTTTS
T ss_pred             cChHH-hccCCCCchhhHHH--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHcCCCCCCccccccC
Confidence            68999 77888999999999  999999999999999 5433211               2222222211 111113457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                      +..+.+|+.+||..||.+||++.++++||||.....
T Consensus       235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  270 (304)
T 2jam_A          235 SESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTA  270 (304)
T ss_dssp             CHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSCS
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCCc
Confidence            899999999999999999999999999999986543

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.64  E-value=6.8e-17  Score=117.90  Aligned_cols=91  Identities=20%  Similarity=0.326  Sum_probs=72.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| .+.+...               ....+.. ..+.+  +..++
T Consensus       185 ~aPE~-~~~~~~~~~~Diws--lG~il~ell~g~~Pf-~~~~~~~---------------~~~~i~~-~~~~~--p~~~s  242 (345)
T 1xjd_A          185 IAPEI-LLGQKYNHSVDWWS--FGVLLYEMLIGQSPF-HGQDEEE---------------LFHSIRM-DNPFY--PRWLE  242 (345)
T ss_dssp             CCHHH-HTTCCBCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHH-CCCCC--CTTSC
T ss_pred             CChhh-hcCCCCCChhhhHH--HHHHHHHHhcCCCCC-CCCCHHH---------------HHHHHHh-CCCCC--CcccC
Confidence            68999 77888999999999  999999999999999 5443221               2223332 23334  45678


Q ss_pred             HHHHHHHHHHhhhcccccCCHH-HHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASAS-LLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~-ell~h~~~~~~  113 (133)
                      ..+.+|+.+||..||.+|+++. ++++||||+..
T Consensus       243 ~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          243 KEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             HHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             HHHHHHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence            9999999999999999999997 99999999753

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=1.6e-16  Score=116.57  Aligned_cols=111  Identities=20%  Similarity=0.229  Sum_probs=69.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchh-------hH---H--hhHHHHHHHhhhC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPY-------LF---I--LSCRQALYLIATN   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-------~~---~--~~~~~~~~~~~~~   68 (133)
                      +|||++.....|+.++|+||  +||++++|++|..|| .+.+.......+-.       ..   +  ...+.........
T Consensus       192 ~aPE~~~~~~~~~~~~Diws--lG~il~ell~g~~pf-~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  268 (367)
T 1cm8_A          192 RAPEVILNWMRYTQTVDIWS--VGCIMAEMITGKTLF-KGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL  268 (367)
T ss_dssp             CCTHHHHTTTCCCTTHHHHH--HHHHHHHHHHSSCSS-CCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCC
T ss_pred             CCHHHHhCCCCCChhhhHHH--HHHHHHHHHhCCCCC-CCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCC
Confidence            68999444478999999999  999999999999999 55432210000000       00   0  0000000000000


Q ss_pred             CCCCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          69 KKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        69 ~~~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ....+. .....++.+.+|+.+||..||.+|+|+.++|+||||+...
T Consensus       269 ~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          269 EKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             CCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             CCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence            001110 0134578999999999999999999999999999998643

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.63  E-value=1.6e-16  Score=115.42  Aligned_cols=95  Identities=24%  Similarity=0.252  Sum_probs=66.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-------------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-------------   67 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------   67 (133)
                      +|||++.....++.++|+||  +|++++++++|..|| .+.+...               ....+..             
T Consensus       198 ~aPE~~~~~~~~~~~~Di~s--lG~il~ell~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  259 (360)
T 3e3p_A          198 RAPELIFGNQHYTTAVDIWS--VGCIFAEMMLGEPIF-RGDNSAG---------------QLHEIVRVLGCPSREVLRKL  259 (360)
T ss_dssp             CCHHHHTTCSSCCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHHHCCCCHHHHHHH
T ss_pred             eCHHHHcCCCCCCcHHHHHH--HHHHHHHHHhCCCCc-CCCChHH---------------HHHHHHHHcCCCCHHHHHhc
Confidence            68998334455899999999  999999999999999 5433211               1111110             


Q ss_pred             -CCCC--------Ccch-------hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          68 -NKKP--------EIKE-------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        68 -~~~~--------~~~~-------~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                       ....        ....       ....+..+.+|+.+||..||.+|||+.++++||||+..
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  321 (360)
T 3e3p_A          260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL  321 (360)
T ss_dssp             CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcccccc
Confidence             0000        0000       01146789999999999999999999999999999754

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.63  E-value=5.1e-16  Score=112.26  Aligned_cols=94  Identities=24%  Similarity=0.257  Sum_probs=69.2

Q ss_pred             CCCccccCCC-CCCC-ccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch---
Q psy9738           1 MAPEGGHHRK-QYGP-KVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE---   75 (133)
Q Consensus         1 maPE~~~~~~-~~~~-~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   75 (133)
                      +|||+ +.+. .++. ++|+||  +|++++++++|..|| .......               ............++.   
T Consensus       217 ~aPE~-~~~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~---------------~~~~~i~~~~~~~~~~~~  277 (348)
T 2pml_X          217 MPPEF-FSNESSYNGAKVDIWS--LGICLYVMFYNVVPF-SLKISLV---------------ELFNNIRTKNIEYPLDRN  277 (348)
T ss_dssp             CCGGG-GSSCCCEEHHHHHHHH--HHHHHHHHHHSSCSS-CCSSCSH---------------HHHHHHTSCCCCCCCSSS
T ss_pred             cCchh-hcCCCCCCcchhhHHH--HHHHHHHHHhCCCCC-CCCCcHH---------------HHHHHHhccCcCCccchh
Confidence            58999 6555 6766 899999  999999999999999 5443322               222222222222210   


Q ss_pred             --------------hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          76 --------------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        76 --------------~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                                    ....+..+.+|+.+||..||.+||++.++++||||+..
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~  329 (348)
T 2pml_X          278 HFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT  329 (348)
T ss_dssp             SSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             hhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence                          14578899999999999999999999999999999853

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.63  E-value=7.5e-17  Score=118.63  Aligned_cols=94  Identities=26%  Similarity=0.295  Sum_probs=72.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+..... ........+
T Consensus       255 ~aPE~-~~~~~~~~~~Diws--lG~il~elltg~~pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  315 (373)
T 2x4f_A          255 LAPEV-VNYDFVSFPTDMWS--VGVIAYMLLSGLSPF-LGDNDAE---------------TLNNILACRWDLEDEEFQDI  315 (373)
T ss_dssp             CCHHH-HTTCBCCHHHHHHH--HHHHHHHHHHSSCTT-CCSSHHH---------------HHHHHHHTCCCSCSGGGTTS
T ss_pred             eChhh-ccCCCCCcHHhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhccCCCChhhhccC
Confidence            68999 77788899999999  999999999999999 5543222               2233332221 111112457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ++.+.+|+.+||..||.+||++.++++||||+..
T Consensus       316 ~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          316 SEEAKEFISKLLIKEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence            8999999999999999999999999999999854

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.63  E-value=1.3e-16  Score=118.47  Aligned_cols=99  Identities=20%  Similarity=0.313  Sum_probs=72.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| .............       ...+..........+  +..++
T Consensus       220 ~aPE~-l~~~~~~~~~Diws--lGvllyell~G~~Pf-~~~~~~~~~~~~~-------~~~~~~~i~~~~~~~--p~~~s  286 (396)
T 4dc2_A          220 IAPEI-LRGEDYGFSVDWWA--LGVLMFEMMAGRSPF-DIVGSSDNPDQNT-------EDYLFQVILEKQIRI--PRSLS  286 (396)
T ss_dssp             CCHHH-HTTCCBCTHHHHHH--HHHHHHHHHHSSCSS-TTTTC------CC-------HHHHHHHHHHCCCCC--CTTSC
T ss_pred             CCchh-hcCCCCChHHHHHH--HHHHHHHHHhCCCCC-cccccccccchhh-------HHHHHHHHhccccCC--CCcCC
Confidence            68999 88889999999999  999999999999999 5332111000000       001222233333444  45689


Q ss_pred             HHHHHHHHHHhhhcccccCCH------HHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA------SLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~------~ell~h~~~~~  112 (133)
                      ..+++|+.+||..||.+|+++      .++++||||+.
T Consensus       287 ~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~  324 (396)
T 4dc2_A          287 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  324 (396)
T ss_dssp             HHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred             HHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence            999999999999999999984      79999999975

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.63  E-value=2.3e-16  Score=111.79  Aligned_cols=100  Identities=17%  Similarity=0.265  Sum_probs=66.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CC-------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PE-------   72 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------   72 (133)
                      ||||++.....++.++|+||  +|+++++|++|..|+ .......+           ............. ..       
T Consensus       168 ~aPE~~~~~~~~~~~~Diws--lG~il~~l~~~~~p~-~~~~~~~~-----------~~~~i~~~~~~~~~~~~~~~~~~  233 (292)
T 3o0g_A          168 RPPDVLFGAKLYSTSIDMWS--AGCIFAELANAGRPL-FPGNDVDD-----------QLKRIFRLLGTPTEEQWPSMTKL  233 (292)
T ss_dssp             CCHHHHTTCSCCCTHHHHHH--HHHHHHHHTTTSCCS-CCCSSHHH-----------HHHHHHHHHCCCCTTTCTTGGGS
T ss_pred             cChHHHcCCCCcCchHHHHH--HHHHHHHHHHcCCCC-cCCCCHHH-----------HHHHHHHHhCCCChhhhhhhccc
Confidence            68999333445899999999  999999999888886 33322110           0001111000000 00       


Q ss_pred             ---------------cchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          73 ---------------IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        73 ---------------~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                                     .......+..+++|+.+||..||.+|||++++++||||+...
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred             ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence                           000124678999999999999999999999999999998643

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.63  E-value=1.4e-16  Score=116.73  Aligned_cols=108  Identities=19%  Similarity=0.250  Sum_probs=67.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcc------cchhh-HHhhHHHHHHHhhhCCC--C
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHF------LIPYL-FILSCRQALYLIATNKK--P   71 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~--~   71 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| .+.+......      ..+.. ................+  .
T Consensus       193 ~aPE~-~~~~~~~~~~Diws--lG~il~el~~g~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (371)
T 2xrw_A          193 RAPEV-ILGMGYKENVDIWS--VGCIMGEMIKGGVLF-PGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYA  268 (371)
T ss_dssp             CCHHH-HTTCCCCTTHHHHH--HHHHHHHHHHSSCSS-CCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCC
T ss_pred             cCHHH-hcCCCCCchHhHHH--HHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCcccc
Confidence            68999 77788999999999  999999999999999 5543211000      00000 00000000000000000  0


Q ss_pred             ---------------CcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          72 ---------------EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        72 ---------------~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                                     ........+..+++|+.+||..||.+|||+.++++||||+.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  324 (371)
T 2xrw_A          269 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  324 (371)
T ss_dssp             CCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             ccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence                           00001223678899999999999999999999999999974

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.63  E-value=2.2e-16  Score=111.44  Aligned_cols=91  Identities=20%  Similarity=0.258  Sum_probs=71.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .......               ....+ ......+  +...+
T Consensus       179 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~---------------~~~~~-~~~~~~~--~~~~~  236 (284)
T 2vgo_A          179 LPPEM-IEGKTHDEKVDLWC--AGVLCYEFLVGMPPF-DSPSHTE---------------THRRI-VNVDLKF--PPFLS  236 (284)
T ss_dssp             CCHHH-HTTCCBCTTHHHHH--HHHHHHHHHHSSCTT-CCSSHHH---------------HHHHH-HTTCCCC--CTTSC
T ss_pred             CCHHH-hccCCCCcccchhh--HHHHHHHHHHCCCCC-CCCCHhH---------------HHHHH-hccccCC--CCcCC
Confidence            58998 77788899999999  999999999999999 4432211               12222 2222333  45678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ..+.+++.+||..||.+||++.++++||||+..
T Consensus       237 ~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~  269 (284)
T 2vgo_A          237 DGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN  269 (284)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred             HHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence            999999999999999999999999999999753

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.63  E-value=1.8e-16  Score=118.23  Aligned_cols=94  Identities=14%  Similarity=0.147  Sum_probs=68.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-------------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-------------   67 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------   67 (133)
                      ||||++.....|+.++||||  +||++++|++|+.|| .+.+...               .+..+..             
T Consensus       223 ~aPE~~~~~~~~~~~~DiwS--lG~il~ell~G~~pf-~~~~~~~---------------~l~~i~~~lg~p~~~~~~~~  284 (420)
T 1j1b_A          223 RAPELIFGATDYTSSIDVWS--AGCVLAELLLGQPIF-PGDSGVD---------------QLVEIIKVLGTPTREQIREM  284 (420)
T ss_dssp             CCHHHHTTCSSCCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHHHCSCCHHHHHHH
T ss_pred             CCHHHHcCCCCCCchhhhHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHHHhCCCCHHHHHhh
Confidence            68999334457999999999  999999999999999 5543221               1111110             


Q ss_pred             -C--CCCCcc----------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          68 -N--KKPEIK----------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        68 -~--~~~~~~----------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                       .  ....++          .+...++.+.+|+.+||..||.+|+++.++++||||+.
T Consensus       285 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~  342 (420)
T 1j1b_A          285 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE  342 (420)
T ss_dssp             CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcc
Confidence             0  000110          01235789999999999999999999999999999975

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.63  E-value=3e-16  Score=114.66  Aligned_cols=110  Identities=21%  Similarity=0.238  Sum_probs=69.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhh----------HHhhHHHHHHHhhhCCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYL----------FILSCRQALYLIATNKK   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~   70 (133)
                      +|||++.....++.++|+||  +|+++++|++|..|| .+.+.......+...          .+...............
T Consensus       198 ~aPE~~~~~~~~~~~~Diws--lG~il~ell~g~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (364)
T 3qyz_A          198 RAPEIMLNSKGYTKSIDIWS--VGCILAEMLSNRPIF-PGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK  274 (364)
T ss_dssp             CCHHHHHTBCSCSTHHHHHH--HHHHHHHHHHSSCSS-CCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCC
T ss_pred             CCCHHhcCCCCCCcchhHHH--HHHHHHHHHHCCCCC-CCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCc
Confidence            58998455666899999999  999999999999999 554433200000000          00000000000000000


Q ss_pred             CCcch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          71 PEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        71 ~~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      .....   ....++.+.+|+.+||..||.+|||+.++++||||+..
T Consensus       275 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          275 NKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             CCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             cCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence            11110   13457889999999999999999999999999999853

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.63  E-value=2e-16  Score=115.72  Aligned_cols=90  Identities=17%  Similarity=0.285  Sum_probs=72.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| .+.+...               ....+.. ....+  +..++
T Consensus       188 ~aPE~-~~~~~~~~~~Diws--lG~il~ell~G~~Pf-~~~~~~~---------------~~~~i~~-~~~~~--p~~~s  245 (353)
T 2i0e_A          188 IAPEI-IAYQPYGKSVDWWA--FGVLLYEMLAGQAPF-EGEDEDE---------------LFQSIME-HNVAY--PKSMS  245 (353)
T ss_dssp             CCHHH-HTTCCBSTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHH-CCCCC--CTTSC
T ss_pred             cChhh-hcCCCcCCcccccc--hHHHHHHHHcCCCCC-CCCCHHH---------------HHHHHHh-CCCCC--CCCCC
Confidence            68999 78888999999999  999999999999999 5443222               2233332 23334  45688


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~  112 (133)
                      ..+.+|+.+||..||.+|++     +.++++||||+.
T Consensus       246 ~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          246 KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             HHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence            99999999999999999994     699999999974

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.62  E-value=1.5e-16  Score=112.31  Aligned_cols=105  Identities=23%  Similarity=0.395  Sum_probs=72.5

Q ss_pred             CCCccc---cCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhh
Q psy9738           1 MAPEGG---HHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKE   77 (133)
Q Consensus         1 maPE~~---~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (133)
                      +|||++   .....++.++|+||  +|++++++++|..|| .......              ...........+... ..
T Consensus       176 ~aPE~~~~~~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~--------------~~~~~~~~~~~~~~~-~~  237 (290)
T 3fme_A          176 MAPERINPELNQKGYSVKSDIWS--LGITMIELAILRFPY-DSWGTPF--------------QQLKQVVEEPSPQLP-AD  237 (290)
T ss_dssp             SCHHHHSCCTTC--CCHHHHHHH--HHHHHHHHHHTSCSS-CCCSCHH--------------HHHHHHHHSCCCCCC-TT
T ss_pred             cChhhcChhhcCcCCCcHHHHHH--HHHHHHHHHHCCCCc-cccCchH--------------HHHHHHhccCCCCcc-cc
Confidence            588883   24556888999999  999999999999999 4322111              022223333333332 24


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC-CCCChhHHH
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR-PLASLTPLI  123 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~-~~~~~~~~~  123 (133)
                      ..+..+.+++.+||..||.+|||+.++++||||+... .......++
T Consensus       238 ~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~~~~~~~~~~~  284 (290)
T 3fme_A          238 KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFV  284 (290)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHHSCCCHHHHH
T ss_pred             cCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCcccccCHHHHH
Confidence            5789999999999999999999999999999997533 333334333

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.62  E-value=2.4e-16  Score=115.11  Aligned_cols=90  Identities=21%  Similarity=0.415  Sum_probs=72.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| .+.+...               ....+... ...+  +..++
T Consensus       205 ~aPE~-~~~~~~~~~~Diws--lG~il~ell~g~~Pf-~~~~~~~---------------~~~~i~~~-~~~~--p~~~~  262 (350)
T 1rdq_E          205 LAPEI-ILSKGYNKAVDWWA--LGVLIYEMAAGYPPF-FADQPIQ---------------IYEKIVSG-KVRF--PSHFS  262 (350)
T ss_dssp             CCHHH-HTTCCBCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHC-CCCC--CTTCC
T ss_pred             cCHHH-hcCCCCCCcCCEec--ccHhHhHHhhCCCCC-CCCCHHH---------------HHHHHHcC-CCCC--CCCCC
Confidence            68999 77888999999999  999999999999999 5443222               22333332 3334  45678


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~  112 (133)
                      ..+.+++.+||..||.+|++     ++++++||||+.
T Consensus       263 ~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~  299 (350)
T 1rdq_E          263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             HHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence            99999999999999999998     999999999975

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.62  E-value=2.2e-16  Score=113.26  Aligned_cols=96  Identities=35%  Similarity=0.654  Sum_probs=70.6

Q ss_pred             CCCccccC-----CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch
Q psy9738           1 MAPEGGHH-----RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE   75 (133)
Q Consensus         1 maPE~~~~-----~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (133)
                      +|||+ +.     ...++.++|+||  +|++++++++|..|| .+.+...               ....+.....+.+. 
T Consensus       196 ~aPE~-~~~~~~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~-  255 (326)
T 2x7f_A          196 MAPEV-IACDENPDATYDFKSDLWS--LGITAIEMAEGAPPL-CDMHPMR---------------ALFLIPRNPAPRLK-  255 (326)
T ss_dssp             CCHHH-HC--------CCTTHHHHH--HHHHHHHHHHSSCTT-TTSCHHH---------------HHHHHHHSCCCCCS-
T ss_pred             cChhh-hccccccCcCCCccchHHH--HHHHHHHHHhCCCCC-CCCcHHH---------------HHHHhhcCccccCC-
Confidence            58888 54     456888999999  999999999999999 5433222               22333333333221 


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCC
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  116 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~  116 (133)
                      ....+..+.+|+.+||..||.+||++.++++||||+.....
T Consensus       256 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~  296 (326)
T 2x7f_A          256 SKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNE  296 (326)
T ss_dssp             CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTTH
T ss_pred             ccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCccc
Confidence            34568899999999999999999999999999999865443

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.62  E-value=3.3e-16  Score=115.93  Aligned_cols=106  Identities=11%  Similarity=0.137  Sum_probs=65.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCC-cccchhhHHhhHHHHHHHhhhCC-CCCcch---
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRP-HFLIPYLFILSCRQALYLIATNK-KPEIKE---   75 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---   75 (133)
                      +|||++.....|+.++||||  +||++++|++|.+|| .+...... .......   .+. .+....... ...+..   
T Consensus       202 ~aPE~~~~~~~~~~~~DiwS--lG~il~ell~g~~pf-~~~~~~~~~~~~~~~~---~l~-~i~~~~g~p~~~~~~~~~~  274 (405)
T 3rgf_A          202 RAPELLLGARHYTKAIDIWA--IGCIFAELLTSEPIF-HCRQEDIKTSNPYHHD---QLD-RIFNVMGFPADKDWEDIKK  274 (405)
T ss_dssp             CCHHHHTTCCSCCHHHHHHH--HHHHHHHHHHSSCTT-CCCC------CCCCHH---HHH-HHHHHHCCCCTTTCGGGGG
T ss_pred             cCchhhcCCCcccchhhhHH--HHHHHHHHHhCCCCC-CCccccccccccchHH---HHH-HHHHhhCCCChhhcchhhc
Confidence            68999333456899999999  999999999999999 54332100 0000000   000 000000000 000000   


Q ss_pred             ----------------------------hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          76 ----------------------------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        76 ----------------------------~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                                                  ....+..+.+|+.+||..||.+|||+.++|+||||...
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~  340 (405)
T 3rgf_A          275 MPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED  340 (405)
T ss_dssp             STTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSS
T ss_pred             CcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccC
Confidence                                        00125678899999999999999999999999999764

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.62  E-value=2.1e-16  Score=115.82  Aligned_cols=101  Identities=17%  Similarity=0.112  Sum_probs=67.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCC---------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKP---------   71 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------   71 (133)
                      ||||+ +.+..|+.++||||  +|+++++|++|..|| .+.+..........     .. .+.......+.         
T Consensus       260 ~aPE~-~~~~~~~~~~Diws--lG~il~elltg~~pf-~~~~~~~~~~~~~~-----~~-~~~~~~~~~p~~~~~~~~~~  329 (397)
T 1wak_A          260 RSLEV-LIGSGYNTPADIWS--TACMAFELATGDYLF-EPHSGEEYTRDEDH-----IA-LIIELLGKVPRKLIVAGKYS  329 (397)
T ss_dssp             CCHHH-HHTSCCCTHHHHHH--HHHHHHHHHHSSCSC-CCCCCSSSCHHHHH-----HH-HHHHHHCSCCHHHHHHCTTG
T ss_pred             cCChh-hcCCCCCcHHHHHH--HHHHHHHHhhCCCCC-CCCcccccCchHHH-----HH-HHHHhcCCCChHHhhccccc
Confidence            68999 77778999999999  999999999999999 54332210000000     00 00000000000         


Q ss_pred             ---------------------------CcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          72 ---------------------------EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        72 ---------------------------~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                                                 ....+...+..+.+|+.+||..||.+|||+.++|+||||+
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          330 KEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             GGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             ccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence                                       0001234467889999999999999999999999999997

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.62  E-value=1.6e-16  Score=116.88  Aligned_cols=94  Identities=24%  Similarity=0.372  Sum_probs=67.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC------------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN------------   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------   68 (133)
                      +|||++.....|+.++|+||  +|+++++|++|..|| .+.+...               .+..+...            
T Consensus       208 ~aPE~~~~~~~~~~~~Diws--lG~il~ell~g~~pf-~~~~~~~---------------~~~~i~~~~g~p~~~~~~~~  269 (383)
T 3eb0_A          208 RAPELMLGATEYTPSIDLWS--IGCVFGELILGKPLF-SGETSID---------------QLVRIIQIMGTPTKEQMIRM  269 (383)
T ss_dssp             CCHHHHTTCSSCCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHHHCCCCHHHHHHH
T ss_pred             cCHHHhcCCCCCCcchhhhh--HHHHHHHHHhCCCCC-CCCChHH---------------HHHHHHHHhCCCCHHHHHHh
Confidence            68998334456899999999  999999999999999 5543222               11111110            


Q ss_pred             -------CCCCcc-------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          69 -------KKPEIK-------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        69 -------~~~~~~-------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                             ..+.+.       .+...++.+.+|+.+||..||.+|||+.++++||||+.
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          270 NPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             CTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             CcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence                   000000       02336788999999999999999999999999999974

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.62  E-value=2.4e-16  Score=115.34  Aligned_cols=96  Identities=20%  Similarity=0.287  Sum_probs=68.3

Q ss_pred             CCCccccCCCCCCCc-cccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPK-VGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~-~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..+..+ +|+||  +|+++++|++|..|| .+......           .......+. .....++.....
T Consensus       184 ~aPE~-~~~~~~~~~~~Diws--lG~il~ell~g~~Pf-~~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~  247 (361)
T 3uc3_A          184 IAPEV-LLRQEYDGKIADVWS--CGVTLYVMLVGAYPF-EDPEEPRD-----------YRKTIQRIL-SVKYSIPDDIRI  247 (361)
T ss_dssp             SCHHH-HHCSSCCHHHHHHHH--HHHHHHHHHHSSCSC-C----CCC-----------HHHHHHHHH-TTCCCCCTTSCC
T ss_pred             CChhh-hcCCCCCCCeeeeeh--hHHHHHHHHhCCCCC-CCCccHHH-----------HHHHHHHHh-cCCCCCCCcCCC
Confidence            68999 666666554 89999  999999999999999 54433220           011222222 222333333457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ++.+.+|+.+||..||.+|||+.++++||||..
T Consensus       248 s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~  280 (361)
T 3uc3_A          248 SPECCHLISRIFVADPATRISIPEIKTHSWFLK  280 (361)
T ss_dssp             CHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHhCcchhc
Confidence            899999999999999999999999999999954

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.62  E-value=2.6e-16  Score=114.70  Aligned_cols=99  Identities=20%  Similarity=0.317  Sum_probs=71.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| ...........    .  . ..............+  +...+
T Consensus       177 ~aPE~-~~~~~~~~~~Diws--lG~il~ell~g~~pf-~~~~~~~~~~~----~--~-~~~~~~~i~~~~~~~--p~~~s  243 (345)
T 3a8x_A          177 IAPEI-LRGEDYGFSVDWWA--LGVLMFEMMAGRSPF-DIVGSSDNPDQ----N--T-EDYLFQVILEKQIRI--PRSLS  243 (345)
T ss_dssp             CCHHH-HTTCCBCTHHHHHH--HHHHHHHHHHSSCTT-TTTTC-------------C-HHHHHHHHHHCCCCC--CTTSC
T ss_pred             cCccc-cCCCCCChHHhHHH--HHHHHHHHHhCCCCc-CCccccccccc----c--c-HHHHHHHHHcCCCCC--CCCCC
Confidence            68999 77888999999999  999999999999999 43211110000    0  0 001222222333444  45678


Q ss_pred             HHHHHHHHHHhhhcccccCCH------HHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA------SLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~------~ell~h~~~~~  112 (133)
                      ..+++++.+||..||.+|+++      .++++||||+.
T Consensus       244 ~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~  281 (345)
T 3a8x_A          244 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  281 (345)
T ss_dssp             HHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence            999999999999999999985      89999999975

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.62  E-value=3.1e-16  Score=115.15  Aligned_cols=110  Identities=19%  Similarity=0.212  Sum_probs=68.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccc------hhh----HHh--hHHHHHHHhhhC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLI------PYL----FIL--SCRQALYLIATN   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~------~~~----~~~--~~~~~~~~~~~~   68 (133)
                      +|||++.....|+.++|+||  +||++++|++|..|| .+.+.......+      +..    .+.  ..+.........
T Consensus       196 ~aPE~~~~~~~~~~~~Diws--lG~il~ell~g~~pf-~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~  272 (367)
T 2fst_X          196 RAPEIMLNWMHYNQTVDIWS--VGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM  272 (367)
T ss_dssp             CCHHHHTTCCSCCTTHHHHH--HHHHHHHHHHSSCSC-CCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCC
T ss_pred             cChHHHcCCcCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCC
Confidence            68999334478899999999  999999999999999 554322100000      000    000  000000000000


Q ss_pred             CCCCcch-hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          69 KKPEIKE-KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        69 ~~~~~~~-~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ....+.. ....++.+.+|+.+||..||.+|+|+.++|+||||+..
T Consensus       273 ~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~  318 (367)
T 2fst_X          273 PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  318 (367)
T ss_dssp             CCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             CCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhc
Confidence            0011100 02357889999999999999999999999999999853

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.62  E-value=3.2e-16  Score=113.13  Aligned_cols=90  Identities=27%  Similarity=0.408  Sum_probs=71.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.+...               ....+... ...+  +..++
T Consensus       188 ~aPE~-~~~~~~~~~~Diws--lG~il~el~~g~~pf-~~~~~~~---------------~~~~i~~~-~~~~--p~~~~  245 (327)
T 3a62_A          188 MAPEI-LMRSGHNRAVDWWS--LGALMYDMLTGAPPF-TGENRKK---------------TIDKILKC-KLNL--PPYLT  245 (327)
T ss_dssp             SCHHH-HTTSCCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH---------------HHHHHHHT-CCCC--CTTSC
T ss_pred             cCHhh-CcCCCCCCcccchh--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHhC-CCCC--CCCCC
Confidence            68999 77788999999999  999999999999999 5443221               22223222 2333  45678


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      ..+.+|+.+||..||.+|+     ++.++++||||+.
T Consensus       246 ~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~  282 (327)
T 3a62_A          246 QEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH  282 (327)
T ss_dssp             HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred             HHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence            9999999999999999999     8899999999975

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.62  E-value=2.4e-16  Score=113.25  Aligned_cols=94  Identities=18%  Similarity=0.326  Sum_probs=71.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc--hhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK--EKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   78 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++|..|| .+.....               ....+.. ....+.  ....
T Consensus       185 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~---------------~~~~i~~-~~~~~~~~~~~~  244 (321)
T 2a2a_A          185 VAPEI-VNYEPLGLEADMWS--IGVITYILLSGASPF-LGDTKQE---------------TLANITS-VSYDFDEEFFSH  244 (321)
T ss_dssp             CCHHH-HTTCCCCTHHHHHH--HHHHHHHHHHSCCSS-CCSSHHH---------------HHHHHHT-TCCCCCHHHHTT
T ss_pred             cCccc-ccCCCCCCccccHH--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHh-cccccChhhhcc
Confidence            58999 77888999999999  999999999999999 5433221               2222222 222221  1245


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      .+..+.+|+.+||..||.+|||+.++++||||+...
T Consensus       245 ~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          245 TSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             CCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             cCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence            688999999999999999999999999999998543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.62  E-value=1.5e-16  Score=117.58  Aligned_cols=95  Identities=25%  Similarity=0.363  Sum_probs=67.3

Q ss_pred             CCCccccCC-----------CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC
Q psy9738           1 MAPEGGHHR-----------KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK   69 (133)
Q Consensus         1 maPE~~~~~-----------~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (133)
                      ||||+ +.+           ..|+.++||||  +|+++++|++|..|| .......              ..+..+.. .
T Consensus       223 ~aPE~-~~~~~~~~~~~~~~~~~~~~~DiwS--lGvil~ell~G~~Pf-~~~~~~~--------------~~~~~~~~-~  283 (390)
T 2zmd_A          223 MPPEA-IKDMSSSRENGKSKSKISPKSDVWS--LGCILYYMTYGKTPF-QQIINQI--------------SKLHAIID-P  283 (390)
T ss_dssp             CCHHH-HHCC------------CCHHHHHHH--HHHHHHHHHHSSCTT-TTCCCHH--------------HHHHHHHC-T
T ss_pred             cChHH-hhhccccccccccccCCCChhhHHH--HHHHHHHHHHCCCcc-hhhhHHH--------------HHHHHHhC-c
Confidence            68888 432           46888999999  999999999999999 4322110              01222222 1


Q ss_pred             CCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          70 KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        70 ~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ......+...+..+.+|+.+||..||.+||++.++++||||+...
T Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          284 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             cccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence            111211344578899999999999999999999999999997543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.62  E-value=1.3e-16  Score=115.82  Aligned_cols=94  Identities=26%  Similarity=0.368  Sum_probs=66.3

Q ss_pred             CCCccccCC-----------CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC
Q psy9738           1 MAPEGGHHR-----------KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK   69 (133)
Q Consensus         1 maPE~~~~~-----------~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (133)
                      ||||+ +.+           ..|+.++||||  +|+++++|++|..|| .......              .....+.. .
T Consensus       176 ~aPE~-~~~~~~~~~~~~~~~~~~~~~Diws--lG~il~ell~g~~pf-~~~~~~~--------------~~~~~~~~-~  236 (343)
T 3dbq_A          176 MPPEA-IKDMSSSRENGKSKSKISPKSDVWS--LGCILYYMTYGKTPF-QQIINQI--------------SKLHAIID-P  236 (343)
T ss_dssp             CCHHH-HHHCC-----------CCHHHHHHH--HHHHHHHHHHSSCTT-TTCCSHH--------------HHHHHHHC-T
T ss_pred             CCHHH-HhhccccccccccccCCCchhhHHH--HHHHHHHHHhCCCcc-hhhhhHH--------------HHHHHHhc-C
Confidence            57888 432           56788999999  999999999999999 4321110              01222221 1


Q ss_pred             CCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          70 KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        70 ~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ......+...+..+.+|+.+||..||.+|||+.++++||||+..
T Consensus       237 ~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          237 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             CcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence            11111244567889999999999999999999999999999753

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.61  E-value=3.4e-16  Score=110.94  Aligned_cols=98  Identities=26%  Similarity=0.511  Sum_probs=66.9

Q ss_pred             CCCccccCC-CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc-----
Q psy9738           1 MAPEGGHHR-KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK-----   74 (133)
Q Consensus         1 maPE~~~~~-~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----   74 (133)
                      +|||+ +.. ..++.++|+||  +|++++++++|..|| .......               ..........+...     
T Consensus       193 ~aPE~-~~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~  253 (303)
T 2vwi_A          193 MAPEV-MEQVRGYDFKADIWS--FGITAIELATGAAPY-HKYPPMK---------------VLMLTLQNDPPSLETGVQD  253 (303)
T ss_dssp             CCHHH-HHHHHCCCTHHHHHH--HHHHHHHHHHSSCTT-TTSCGGG---------------HHHHHHTSSCCCTTC----
T ss_pred             cCHHH-hccccCCCchhhHHH--HHHHHHHHHhCCCCC-ccCchhh---------------HHHHHhccCCCcccccccc
Confidence            57888 433 56889999999  999999999999999 5433322               22222222211111     


Q ss_pred             --hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCC
Q psy9738          75 --EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  117 (133)
Q Consensus        75 --~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~  117 (133)
                        .....+..+.+++.+||..||.+||++.++++||||+.....+
T Consensus       254 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~  298 (303)
T 2vwi_A          254 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKE  298 (303)
T ss_dssp             -CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-------
T ss_pred             chhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCCCCc
Confidence              0134678899999999999999999999999999998765443

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.61  E-value=3.3e-16  Score=112.87  Aligned_cols=86  Identities=15%  Similarity=0.325  Sum_probs=63.2

Q ss_pred             CCCccccC---CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC--CCCcc-
Q psy9738           1 MAPEGGHH---RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK--KPEIK-   74 (133)
Q Consensus         1 maPE~~~~---~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-   74 (133)
                      ||||+ +.   ...|+.++||||  +|+++|||++|+.|| .+.+...               ....+....  .+.+. 
T Consensus       201 mAPE~-l~~~~~~~y~~ksDVwS--~Gvvl~Elltg~~Pf-~~~~~~~---------------~~~~~~~~~~~~p~~~~  261 (307)
T 3omv_A          201 MAPEV-IRMQDNNPFSFQSDVYS--YGIVLYELMTGELPY-SHINNRD---------------QIIFMVGRGYASPDLSK  261 (307)
T ss_dssp             CCHHH-HHCCSSCCCCHHHHHHH--HHHHHHHHHHSSCTT-TTCCCHH---------------HHHHHHHTTCCCCCSTT
T ss_pred             cCHHH-hhccCCCCCCcHHHhHh--HHHHHHHHHHCCCCC-CCCChHH---------------HHHHHHhcCCCCCCccc
Confidence            89999 53   346899999999  999999999999999 5443322               222222221  12221 


Q ss_pred             hhhhhcHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          75 EKEKLSQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        75 ~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      .+...++.+.+|+.+||..||.+|||+.+++
T Consensus       262 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~  292 (307)
T 3omv_A          262 LYKNCPKAMKRLVADCVKKVKEERPLFPQIL  292 (307)
T ss_dssp             SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHH
T ss_pred             ccccchHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence            1356789999999999999999999999864

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.61  E-value=3e-16  Score=114.33  Aligned_cols=103  Identities=18%  Similarity=0.183  Sum_probs=67.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-----------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-----------   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------   69 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.........  ...+   . .+.......           
T Consensus       202 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~~g~~pf-~~~~~~~~~~~--~~~~---~-~~~~~~~~~p~~~~~~~~~~  271 (373)
T 1q8y_A          202 RSPEV-LLGAPWGCGADIWS--TACLIFELITGDFLF-EPDEGHSYTKD--DDHI---A-QIIELLGELPSYLLRNGKYT  271 (373)
T ss_dssp             CCHHH-HHTCCCCTHHHHHH--HHHHHHHHHHSSCCC----------CH--HHHH---H-HHHHHHCSCCHHHHHHCTTH
T ss_pred             cCcHH-HhCCCCCchHhHHH--HHHHHHHHHhCCCCC-CCCcccccCCh--HHHH---H-HHHHhcCCCCHHHHhccchh
Confidence            68999 77778999999999  999999999999999 54322110000  0000   0 000000000           


Q ss_pred             ---------------------------CCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          70 ---------------------------KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        70 ---------------------------~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                                                 ...+  +...+..+.+|+.+||..||.+|||+.++++||||+....
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  342 (373)
T 1q8y_A          272 RTFFNSRGLLRNISKLKFWPLEDVLTEKYKF--SKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG  342 (373)
T ss_dssp             HHHBCC--CBSSCCCCCBCCHHHHHHHTTCC--CHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTT
T ss_pred             hhhcCCcchhcccccccccchhhhhhhcccC--CcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccC
Confidence                                       0011  2345678899999999999999999999999999986543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.61  E-value=1.3e-16  Score=116.87  Aligned_cols=98  Identities=7%  Similarity=0.017  Sum_probs=70.0

Q ss_pred             CCCccccCC--CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCC-CcccchhhHHhhHHHHHHHhhhCCCCCcchhh
Q psy9738           1 MAPEGGHHR--KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLR-PHFLIPYLFILSCRQALYLIATNKKPEIKEKE   77 (133)
Q Consensus         1 maPE~~~~~--~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (133)
                      ||||+ +.+  ..|+.++|+||  +|+++++|++|..|| .+..... ..+..          ............++...
T Consensus       258 ~aPE~-~~~~~~~~~~~~DiwS--lG~il~elltg~~Pf-~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~  323 (371)
T 3q60_A          258 APREF-LNASTATFTHALNAWQ--LGLSIYRVWCLFLPF-GLVTPGIKGSWKR----------PSLRVPGTDSLAFGSCT  323 (371)
T ss_dssp             CCHHH-HTCSEEECCHHHHHHH--HHHHHHHHHHSSCST-TBCCTTCTTCCCB----------CCTTSCCCCSCCCTTSS
T ss_pred             cChhh-ccCCCCCcCccccHHH--HHHHHHHHHhCCCCC-CCcCcccccchhh----------hhhhhccccccchhhcc
Confidence            68999 665  67899999999  999999999999999 5442221 00000          00000001112222234


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      .+++.+.+|+.+||..||.+||++.++++||||+.
T Consensus       324 ~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  358 (371)
T 3q60_A          324 PLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ  358 (371)
T ss_dssp             CCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence            67899999999999999999999999999999974

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.61  E-value=4.3e-16  Score=113.12  Aligned_cols=95  Identities=20%  Similarity=0.182  Sum_probs=67.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh----CCC------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT----NKK------   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~------   70 (133)
                      +|||++.....|+.++|+||  +|+++++|++|.+|| .+.+...               ....+..    ...      
T Consensus       179 ~aPE~~~~~~~~~~~~Diws--lG~il~ell~g~~~~-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  240 (346)
T 1ua2_A          179 RAPELLFGARMYGVGVDMWA--VGCILAELLLRVPFL-PGDSDLD---------------QLTRIFETLGTPTEEQWPDM  240 (346)
T ss_dssp             CCHHHHTTCSCCCHHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHHHCCCCTTTSSST
T ss_pred             cCchHhhCCCCCCchhhhHh--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHHHcCCCChhhhhhh
Confidence            68998334456888999999  999999999999999 5443221               1111111    000      


Q ss_pred             ------------CCcch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          71 ------------PEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        71 ------------~~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                                  +..+.   ....+..+.+|+.+||..||.+|||+.++++||||+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~  298 (346)
T 1ua2_A          241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR  298 (346)
T ss_dssp             TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcC
Confidence                        00000   13456889999999999999999999999999999753

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.61  E-value=3.8e-16  Score=109.74  Aligned_cols=93  Identities=18%  Similarity=0.232  Sum_probs=72.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| ...+...               ....+.....+.+  +...+
T Consensus       183 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~~  241 (279)
T 2w5a_A          183 MSPEQ-MNRMSYNEKSDIWS--LGCLLYELCALMPPF-TAFSQKE---------------LAGKIREGKFRRI--PYRYS  241 (279)
T ss_dssp             CCHHH-HHCC-CCHHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHTCCCCC--CTTSC
T ss_pred             cChHH-hccCCCCchhhHHH--HHHHHHHHHHCCCCC-cccCHHH---------------HHHHHhhcccccC--CcccC
Confidence            58998 77778899999999  999999999999999 4432211               2223333333334  34678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ..+.+++.+||..||.+||++.++++|+|+....
T Consensus       242 ~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          242 DELNEIITRMLNLKDYHRPSVEEILENPLILEHH  275 (279)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence            9999999999999999999999999999998654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.60  E-value=1.2e-15  Score=109.27  Aligned_cols=88  Identities=23%  Similarity=0.240  Sum_probs=66.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+ .++.++||||  +|++++++++|..++ .+..                  ....+.. .......+...+
T Consensus       223 ~aPE~-~~~-~~~~~~Diws--lG~il~el~~g~~~~-~~~~------------------~~~~~~~-~~~~~~~~~~~~  278 (311)
T 3p1a_A          223 MAPEL-LQG-SYGTAADVFS--LGLTILEVACNMELP-HGGE------------------GWQQLRQ-GYLPPEFTAGLS  278 (311)
T ss_dssp             CCGGG-GGT-CCSTHHHHHH--HHHHHHHHHHTCCCC-SSHH------------------HHHHHTT-TCCCHHHHTTSC
T ss_pred             cCHhH-hcC-CCCchhhHHH--HHHHHHHHHhCCCCC-CCcc------------------HHHHHhc-cCCCcccccCCC
Confidence            68998 654 7899999999  999999999997666 3321                  1111111 111111234578


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ..+.+|+.+||..||.+|||+.++++||||+.
T Consensus       279 ~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          279 SELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            99999999999999999999999999999974

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.60  E-value=3.7e-16  Score=118.50  Aligned_cols=92  Identities=25%  Similarity=0.395  Sum_probs=70.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (133)
                      ||||+ +. ..|+.++||||  +|+++++|++|..|| .+.....               ....+..... ...+....+
T Consensus       205 ~aPE~-l~-~~~~~~~Diws--lG~il~~ll~g~~pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  264 (494)
T 3lij_A          205 IAPEV-LR-KKYDEKCDVWS--IGVILFILLAGYPPF-GGQTDQE---------------ILRKVEKGKYTFDSPEWKNV  264 (494)
T ss_dssp             CCHHH-HT-TCBCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHTCCCCCSGGGTTS
T ss_pred             eCHHH-Hc-ccCCCchhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhCCCCCCchhcccC
Confidence            68998 54 56899999999  999999999999999 5443222               2233332221 222223467


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ++.+.+|+.+||..||.+|||+.++|+||||+.
T Consensus       265 s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          265 SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             CHHHHHHHHHHCCCChhhCccHHHHhcCccccc
Confidence            899999999999999999999999999999974

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.60  E-value=4.4e-16  Score=122.30  Aligned_cols=90  Identities=17%  Similarity=0.291  Sum_probs=73.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++|+|++|..|| .+.+...               ....+ ......+  +..++
T Consensus       509 ~APE~-l~~~~~~~~~DvwS--lGvilyelltG~~Pf-~~~~~~~---------------~~~~i-~~~~~~~--p~~~s  566 (674)
T 3pfq_A          509 IAPEI-IAYQPYGKSVDWWA--FGVLLYEMLAGQAPF-EGEDEDE---------------LFQSI-MEHNVAY--PKSMS  566 (674)
T ss_dssp             CCHHH-HTCCCBSTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHH-HSSCCCC--CTTSC
T ss_pred             cCHhh-hcCCCCCccceEec--hHHHHHHHHcCCCCC-CCCCHHH---------------HHHHH-HhCCCCC--CccCC
Confidence            69999 88889999999999  999999999999999 6543322               23333 3333444  45789


Q ss_pred             HHHHHHHHHHhhhcccccCCH-----HHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA-----SLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~-----~ell~h~~~~~  112 (133)
                      +++.+|+.+||..||.+|+++     +++++||||+.
T Consensus       567 ~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~  603 (674)
T 3pfq_A          567 KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  603 (674)
T ss_dssp             HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred             HHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccC
Confidence            999999999999999999987     99999999975

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.60  E-value=3.4e-16  Score=118.94  Aligned_cols=96  Identities=18%  Similarity=0.272  Sum_probs=72.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (133)
                      +|||+ +. ..|+.++|+||  +|+++++|++|..|| .+.+...               ....+..... ........+
T Consensus       215 ~aPE~-~~-~~~~~~~Diws--lG~il~~ll~g~~pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  274 (504)
T 3q5i_A          215 IAPEV-LK-KKYNEKCDVWS--CGVIMYILLCGYPPF-GGQNDQD---------------IIKKVEKGKYYFDFNDWKNI  274 (504)
T ss_dssp             CCHHH-HT-TCBCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHCCCCCCHHHHTTS
T ss_pred             CCHHH-hc-cCCCchHHHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHcCCCCCCccccCCC
Confidence            68998 54 46899999999  999999999999999 5443222               2333333222 222223567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  116 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~  116 (133)
                      ++.+++|+.+||..||.+|||+.++|+||||+.....
T Consensus       275 s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~  311 (504)
T 3q5i_A          275 SDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANN  311 (504)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCC
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhc
Confidence            8999999999999999999999999999999865543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.60  E-value=3.8e-16  Score=110.43  Aligned_cols=94  Identities=21%  Similarity=0.377  Sum_probs=70.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (133)
                      +|||+ +.+ .++.++|+||  +|++++++++|..|| .+.+...               ....+.... ....+....+
T Consensus       190 ~aPE~-~~~-~~~~~~Di~s--lG~~l~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  249 (287)
T 2wei_A          190 IAPEV-LRG-TYDEKCDVWS--AGVILYILLSGTPPF-YGKNEYD---------------ILKRVETGKYAFDLPQWRTI  249 (287)
T ss_dssp             CCHHH-HTT-CCCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHCCCCCCSGGGTTS
T ss_pred             cChHH-hcC-CCCCchhhHh--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHcCCCCCCchhhhhc
Confidence            58888 544 4888999999  999999999999999 5433211               222222222 1233223567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      +..+.+++.+||..||.+|||+.++++||||+...
T Consensus       250 ~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  284 (287)
T 2wei_A          250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS  284 (287)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHhcCHHHhccc
Confidence            89999999999999999999999999999997644

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.60  E-value=1.2e-15  Score=112.95  Aligned_cols=93  Identities=18%  Similarity=0.269  Sum_probs=70.1

Q ss_pred             CCCccccC---CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhh
Q psy9738           1 MAPEGGHH---RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKE   77 (133)
Q Consensus         1 maPE~~~~---~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (133)
                      ||||+ +.   +..|+.++|+||  +|+++|+|++|..|| .......            .. ............+  +.
T Consensus       181 ~aPE~-~~~~~~~~~~~~~DiwS--lG~il~elltG~~Pf-~~~~~~~------------~~-~~~~~~~~~~~~~--p~  241 (384)
T 4fr4_A          181 MAPEM-FSSRKGAGYSFAVDWWS--LGVTAYELLRGRRPY-HIRSSTS------------SK-EIVHTFETTVVTY--PS  241 (384)
T ss_dssp             CCGGG-TCCCSSCCBCTTHHHHH--HHHHHHHHHHSSCSS-CCCTTSC------------HH-HHHHHHHHCCCCC--CT
T ss_pred             cCCee-eccCCCCCCCccceeec--hHHHHHHHHhCCCCC-CCCCCcc------------HH-HHHHHHhhcccCC--CC
Confidence            68999 54   346889999999  999999999999999 5443322            00 1112222222333  45


Q ss_pred             hhcHHHHHHHHHHhhhcccccCC-HHHHhcCccccc
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRAS-ASLLLKHPFLKI  112 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s-~~ell~h~~~~~  112 (133)
                      .++..+.+|+.+||..||.+|++ +++++.||||+.
T Consensus       242 ~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~  277 (384)
T 4fr4_A          242 AWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND  277 (384)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTT
T ss_pred             cCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhc
Confidence            67899999999999999999998 899999999974

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.60  E-value=1.2e-16  Score=115.29  Aligned_cols=110  Identities=24%  Similarity=0.356  Sum_probs=68.1

Q ss_pred             CCCccccCC-CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhh--HH-hhHHHHHHHhhh---CCCCCc
Q psy9738           1 MAPEGGHHR-KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYL--FI-LSCRQALYLIAT---NKKPEI   73 (133)
Q Consensus         1 maPE~~~~~-~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~---~~~~~~   73 (133)
                      +|||+ +.+ ..++.++|+||  +|+++++|++|..|| .+.........+...  .. -...........   ...+.+
T Consensus       191 ~aPE~-~~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (331)
T 4aaa_A          191 RAPEL-LVGDVKYGKAVDVWA--IGCLVTEMFMGEPLF-PGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEI  266 (331)
T ss_dssp             CCHHH-HTTCTTCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCC
T ss_pred             cCccc-ccCCCCcchHHHHHH--HHHHHHHHHhCCCCC-CCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccc
Confidence            58998 544 47889999999  999999999999999 544322100000000  00 000000000000   000000


Q ss_pred             c-------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          74 K-------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        74 ~-------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      .       ....++..+.+|+.+||..||.+|||+.++++||||+...
T Consensus       267 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  314 (331)
T 4aaa_A          267 KEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDG  314 (331)
T ss_dssp             SSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGGG
T ss_pred             cccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccCC
Confidence            0       0124678999999999999999999999999999998653

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.60  E-value=1.8e-16  Score=115.46  Aligned_cols=95  Identities=22%  Similarity=0.349  Sum_probs=70.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc--hhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK--EKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   78 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| .+.....            .......+.... ..+.  ....
T Consensus       187 ~aPE~-~~~~~~~~~~Diws--lG~il~ell~g~~Pf-~~~~~~~------------~~~~~~~i~~~~-~~~~~~~~~~  249 (342)
T 2qr7_A          187 VAPEV-LERQGYDAACDIWS--LGVLLYTMLTGYTPF-ANGPDDT------------PEEILARIGSGK-FSLSGGYWNS  249 (342)
T ss_dssp             CCHHH-HHHHHHHHHHHHHH--HHHHHHHHHHSSCSS-CSSTTSC------------HHHHHHHHHHCC-CCCCSTTTTT
T ss_pred             cCHHH-hcCCCCCCccCeee--HhHHHHHHhcCCCCC-CCCCcCC------------HHHHHHHHccCC-cccCcccccc
Confidence            68888 66667888999999  999999999999999 5432211            000222222222 2221  1245


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ++..+.+|+.+||..||.+||++.++++||||..
T Consensus       250 ~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          250 VSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence            7899999999999999999999999999999964

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.60  E-value=4.1e-16  Score=114.26  Aligned_cols=92  Identities=25%  Similarity=0.509  Sum_probs=67.9

Q ss_pred             CCCccccC------CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCc
Q psy9738           1 MAPEGGHH------RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEI   73 (133)
Q Consensus         1 maPE~~~~------~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   73 (133)
                      +|||+ +.      ...|+.++|+||  +|+++++|++|..|| .+.....               ....+..... ...
T Consensus       266 ~aPE~-~~~~~~~~~~~~~~~~Di~s--lG~il~ell~g~~pf-~~~~~~~---------------~~~~i~~~~~~~~~  326 (365)
T 2y7j_A          266 LAPEI-LKCSMDETHPGYGKEVDLWA--CGVILFTLLAGSPPF-WHRRQIL---------------MLRMIMEGQYQFSS  326 (365)
T ss_dssp             CCHHH-HHHTTCTTSCCBCTTHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHTCCCCCH
T ss_pred             cChhh-ccccccccCcCCCchhhHHh--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHhCCCCCCC
Confidence            57888 42      335888999999  999999999999999 5433211               2222222221 222


Q ss_pred             chhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          74 KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        74 ~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      +.....+..+.+|+.+||..||.+||++.++++||||+
T Consensus       327 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          327 PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence            22245688899999999999999999999999999996

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.60  E-value=3.8e-16  Score=112.76  Aligned_cols=98  Identities=13%  Similarity=0.125  Sum_probs=68.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC----------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK----------   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------   70 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++|..|| .+..... ..           .....+....+          
T Consensus       206 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~~g~~pf-~~~~~~~-~~-----------~~~~~~~~~~p~~~~~~~~~~  269 (355)
T 2eu9_A          206 RPPEV-ILELGWAQPCDVWS--IGCILFEYYRGFTLF-QTHENRE-HL-----------VMMEKILGPIPSHMIHRTRKQ  269 (355)
T ss_dssp             CCHHH-HTTCCCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH-HH-----------HHHHHHHCCCCHHHHHHCSCG
T ss_pred             cCCee-eecCCCCCccchHH--HHHHHHHHHhCCCCC-CCCCHHH-HH-----------HHHHHHcCCCcHHHhhhccch
Confidence            68999 77888999999999  999999999999999 4432111 00           00001100000          


Q ss_pred             ------------------------C----CcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          71 ------------------------P----EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        71 ------------------------~----~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                                              .    ........+..+.+|+.+||..||.+|||+.++++||||+...
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          270 KYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             GGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred             hhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence                                    0    0000112356788999999999999999999999999998643

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.60  E-value=5.2e-16  Score=108.95  Aligned_cols=90  Identities=28%  Similarity=0.337  Sum_probs=66.4

Q ss_pred             CCCccccCCC-CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRK-QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~-~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+. .++.++||||  +|++++++++|.+++ ....                  ....+.....+.+  +...
T Consensus       197 ~aPE~-~~~~~~~~~~~Di~s--lG~il~~l~~~~~~~-~~~~------------------~~~~~~~~~~~~~--~~~~  252 (289)
T 1x8b_A          197 LANEV-LQENYTHLPKADIFA--LALTVVCAAGAEPLP-RNGD------------------QWHEIRQGRLPRI--PQVL  252 (289)
T ss_dssp             CCHHH-HTTCCTTHHHHHHHH--HHHHHHHHTTCCCCC-SSSH------------------HHHHHHTTCCCCC--SSCC
T ss_pred             cChhH-hcCCCCCCchhhHHH--HHHHHHHHhcCCCCC-cchh------------------HHHHHHcCCCCCC--Cccc
Confidence            58998 5443 6667999999  999999999998776 3221                  2223333333344  4467


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      +..+.+++.+||..||.+||++.++++||||+...
T Consensus       253 ~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          253 SQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS  287 (289)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC----
T ss_pred             CHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhhc
Confidence            89999999999999999999999999999998643

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.60  E-value=4.2e-16  Score=111.79  Aligned_cols=98  Identities=15%  Similarity=0.212  Sum_probs=68.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCC---------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKP---------   71 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------   71 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .+.+... ..           .....+....+.         
T Consensus       201 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~~g~~pf-~~~~~~~-~~-----------~~~~~~~~~~p~~~~~~~~~~  264 (339)
T 1z57_A          201 RAPEV-ILALGWSQPCDVWS--IGCILIEYYLGFTVF-PTHDSKE-HL-----------AMMERILGPLPKHMIQKTRKR  264 (339)
T ss_dssp             CCHHH-HTTSCCCTHHHHHH--HHHHHHHHHHSSCSC-CCSCHHH-HH-----------HHHHHHHCSCCHHHHHHCSCG
T ss_pred             cChHH-hhCCCCCcchhhHH--HHHHHHHHHhCCCCC-CCCChHH-HH-----------HHHHHHhCCCCHHHHhhccch
Confidence            68999 77888999999999  999999999999999 5432211 00           000000000000         


Q ss_pred             -------------------------C----cchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          72 -------------------------E----IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        72 -------------------------~----~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                                               .    .......+..+.+|+.+||..||.+|||+.++++||||+..+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  336 (339)
T 1z57_A          265 KYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK  336 (339)
T ss_dssp             GGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred             hHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHh
Confidence                                     0    000123457789999999999999999999999999998643

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.60  E-value=6.4e-16  Score=113.31  Aligned_cols=109  Identities=21%  Similarity=0.262  Sum_probs=67.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccc------hhh------HHhhHHHHHHHhhhC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLI------PYL------FILSCRQALYLIATN   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~------~~~------~~~~~~~~~~~~~~~   68 (133)
                      +|||++.....++.++|+||  +|+++++|++|..|| .+.+.......+      +..      ...............
T Consensus       208 ~aPE~~~~~~~~~~~~Diws--lG~il~el~~g~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (371)
T 4exu_A          208 RAPEVILSWMHYNQTVDIWS--VGCIMAEMLTGKTLF-KGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT  284 (371)
T ss_dssp             SCHHHHSCCSCCCTTHHHHH--HHHHHHHHHHSSCSC-CCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCC
T ss_pred             cCHHHhcCCCCCCcHHhHHH--HHHHHHHHHhCCCCC-CCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCC
Confidence            68998333478899999999  999999999999999 543321100000      000      000000000000000


Q ss_pred             CCCCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          69 KKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        69 ~~~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ....+. .....++.+.+|+.+||..||.+|||+.++++||||+.
T Consensus       285 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  329 (371)
T 4exu_A          285 PRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP  329 (371)
T ss_dssp             CCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             cchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCccccc
Confidence            001110 01245789999999999999999999999999999974

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.60  E-value=3.8e-16  Score=111.49  Aligned_cols=95  Identities=23%  Similarity=0.403  Sum_probs=69.4

Q ss_pred             CCCcccc-----CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch
Q psy9738           1 MAPEGGH-----HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE   75 (133)
Q Consensus         1 maPE~~~-----~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (133)
                      +|||+ +     ....++.++|+||  +|+++++|++|..|| .......              .....+.....+.++.
T Consensus       191 ~aPE~-~~~~~~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~--------------~~~~~~~~~~~~~~~~  252 (318)
T 2dyl_A          191 MAPER-IDPPDPTKPDYDIRADVWS--LGISLVELATGQFPY-KNCKTDF--------------EVLTKVLQEEPPLLPG  252 (318)
T ss_dssp             CCHHH-HC--------CCTHHHHHH--HHHHHHHHHHSSCTT-TTCCSHH--------------HHHHHHHHSCCCCCCS
T ss_pred             cChhh-cccccccccCCccccchhh--HHHHHHHHHhCCCCC-CCCCccH--------------HHHHHHhccCCCCCCc
Confidence            58888 5     3456788999999  999999999999999 4322111              0233333444444433


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ....++.+.+++.+||..||.+||++.++++||||+..
T Consensus       253 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          253 HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY  290 (318)
T ss_dssp             SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred             cCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence            34578999999999999999999999999999999753

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.60  E-value=1.1e-15  Score=114.58  Aligned_cols=92  Identities=20%  Similarity=0.321  Sum_probs=65.4

Q ss_pred             CCCccccC---CCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcch
Q psy9738           1 MAPEGGHH---RKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKE   75 (133)
Q Consensus         1 maPE~~~~---~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   75 (133)
                      ||||+ +.   ...++.++||||  +||+++++++ |..|| . .....               .......... .....
T Consensus       193 ~APE~-l~~~~~~~~t~~~DiwS--lG~il~ellt~g~~pf-~-~~~~~---------------~~~~~~~~~~~~~~~~  252 (432)
T 3p23_A          193 IAPEM-LSEDCKENPTYTVDIFS--AGCVFYYVISEGSHPF-G-KSLQR---------------QANILLGACSLDCLHP  252 (432)
T ss_dssp             CCGGG-TSCC---CCCTHHHHHH--HHHHHHHHHTTSCBTT-B-STTTH---------------HHHHHTTCCCCTTSCT
T ss_pred             cChhh-hhcccccCCCcHHHHHH--HHHHHHHHHcCCCCCc-c-hhhHH---------------HHHHHhccCCccccCc
Confidence            69999 54   456677999999  9999999999 88888 3 32222               1222221111 11111


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ....+..+.+|+.+||..||.+|||+.++++||||..
T Consensus       253 ~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          253 EKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             cccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence            2345677899999999999999999999999999964

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.59  E-value=7.2e-16  Score=110.68  Aligned_cols=97  Identities=20%  Similarity=0.245  Sum_probs=70.2

Q ss_pred             CCCcccc--CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc-hhh
Q psy9738           1 MAPEGGH--HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK-EKE   77 (133)
Q Consensus         1 maPE~~~--~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   77 (133)
                      +|||++.  ....++.++|+||  +|++++++++|..|| ........              ....+........+ ...
T Consensus       183 ~aPE~~~~~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~~--------------~~~~~~~~~~~~~~~~~~  245 (322)
T 2ycf_A          183 LAPEVLVSVGTAGYNRAVDCWS--LGVILFICLSGYPPF-SEHRTQVS--------------LKDQITSGKYNFIPEVWA  245 (322)
T ss_dssp             CCHHHHHHTTTTTCTTHHHHHH--HHHHHHHHHHSSCSS-CSTTCSSC--------------HHHHHHHTCCCCCHHHHT
T ss_pred             cCchhhccCCCCCCCchhhHHH--HHHHHHHHHhCCCCC-cccchHHH--------------HHHHHHhCccccCchhhh
Confidence            5889832  3567889999999  999999999999999 54332220              11222222211111 124


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ..+..+.+|+.+||..||.+||++.++++||||+...
T Consensus       246 ~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~~  282 (322)
T 2ycf_A          246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED  282 (322)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCHH
T ss_pred             hcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCHH
Confidence            5688999999999999999999999999999998543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.59  E-value=6.4e-16  Score=117.15  Aligned_cols=90  Identities=19%  Similarity=0.262  Sum_probs=69.8

Q ss_pred             CCCccccCCCCC-CCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQY-GPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~-~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..+ +.++|+||  +|+++++|++|..|| .+.+...               ....+ .......  +...
T Consensus       182 ~aPE~-~~~~~~~~~~~DiwS--lGvil~elltG~~Pf-~~~~~~~---------------~~~~i-~~~~~~~--p~~~  239 (476)
T 2y94_A          182 AAPEV-ISGRLYAGPEVDIWS--SGVILYALLCGTLPF-DDDHVPT---------------LFKKI-CDGIFYT--PQYL  239 (476)
T ss_dssp             CCHHH-HTTCCBCSHHHHHHH--HHHHHHHHHHSSCSS-CCSSSHH---------------HHHHH-HTTCCCC--CTTC
T ss_pred             EChhh-ccCCCCCCCcceehh--hHHHHHHHhhCCCCC-CCCCHHH---------------HHHHH-hcCCcCC--CccC
Confidence            58999 666655 67899999  999999999999999 5433221               22222 2222333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ++.+.+|+.+||..||.+|||+.++++||||+.
T Consensus       240 s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~  272 (476)
T 2y94_A          240 NPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ  272 (476)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred             CHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence            899999999999999999999999999999975

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.59  E-value=6.7e-16  Score=108.31  Aligned_cols=92  Identities=22%  Similarity=0.268  Sum_probs=69.2

Q ss_pred             CCCccccCCCCC-CCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQY-GPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~-~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..+ +.++|+||  +|++++++++|..|| .......               ....+. .....+  +...
T Consensus       177 ~aPE~-~~~~~~~~~~~Di~s--lG~~l~~l~~g~~p~-~~~~~~~---------------~~~~~~-~~~~~~--~~~~  234 (276)
T 2h6d_A          177 AAPEV-ISGRLYAGPEVDIWS--CGVILYALLCGTLPF-DDEHVPT---------------LFKKIR-GGVFYI--PEYL  234 (276)
T ss_dssp             CCTGG-GTTSCCCHHHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHH-HCCCCC--CTTS
T ss_pred             cCHHH-HcCCCCCCccchHHH--HHHHHHHHHhCCCCC-CCCcHHH---------------HHHHhh-cCcccC--chhc
Confidence            58999 665555 57899999  999999999999999 4332111               122222 222223  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      +..+.+++.+||..||.+||++.++++||||+...
T Consensus       235 ~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~  269 (276)
T 2h6d_A          235 NRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL  269 (276)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence            88999999999999999999999999999997643

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.59  E-value=9e-16  Score=115.20  Aligned_cols=110  Identities=15%  Similarity=0.150  Sum_probs=65.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-----------CCCCCCCCCCCCC--------CcccchhhHHhhHHHH
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-----------GEPPLIWNENPLR--------PHFLIPYLFILSCRQA   61 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-----------g~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~   61 (133)
                      ||||++.....|+.++||||  +||++++|++           |.++| .+.+...        ..+.........-...
T Consensus       250 ~aPE~~~~~~~~~~~~DiwS--lG~il~elltg~~~~~~~~~~~~p~f-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  326 (458)
T 3rp9_A          250 RAPELILLQENYTEAIDVWS--IGCIFAELLNMIKENVAYHADRGPLF-PGSSCFPLSPDQKAGNDFKFHTRGNRDQLNV  326 (458)
T ss_dssp             CCHHHHTTCCCCCTHHHHHH--HHHHHHHHHTTSTTTCSSGGGCCCSC-C--------------------CHHHHHHHHH
T ss_pred             cChHHhhCCCCCCcHhHHHH--HHHHHHHHHHhccccccccccccccC-CCCccccccccccccccccccccCCHHHHHH
Confidence            68998456778999999999  9999999998           56666 4432110        0000000000000000


Q ss_pred             HHHhhhC------------------------CCCCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          62 LYLIATN------------------------KKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        62 ~~~~~~~------------------------~~~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      +..+...                        ....+. .....++.+.+|+.+||..||.+|+|++++|+||||+..
T Consensus       327 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~  403 (458)
T 3rp9_A          327 IFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV  403 (458)
T ss_dssp             HHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence            0000000                        000010 012357899999999999999999999999999999854

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.59  E-value=3.2e-16  Score=111.75  Aligned_cols=96  Identities=20%  Similarity=0.284  Sum_probs=68.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC------------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN------------   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------   68 (133)
                      +|||++.....++.++|+||  +|++++++++|..|| .+.+...               ....+...            
T Consensus       191 ~aPE~~~~~~~~~~~~Di~s--lG~il~el~~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  252 (320)
T 2i6l_A          191 RSPRLLLSPNNYTKAIDMWA--AGCIFAEMLTGKTLF-AGAHELE---------------QMQLILESIPVVHEEDRQEL  252 (320)
T ss_dssp             CCHHHHHCTTCCCHHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHHSCCCCHHHHHHH
T ss_pred             cCcHHhcCcccCCchhhhHh--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHHhcCCCchhhhhhh
Confidence            57888344577889999999  999999999999999 5443211               11111100            


Q ss_pred             --------------CCCCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          69 --------------KKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        69 --------------~~~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                                    ....+. ....++..+.+|+.+||..||.+||++.++++||||+...
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          253 LSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS  313 (320)
T ss_dssp             HTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred             hhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence                          000100 0134688999999999999999999999999999998644

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.59  E-value=6.3e-16  Score=111.98  Aligned_cols=108  Identities=18%  Similarity=0.165  Sum_probs=68.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccc-----------hhhHHhhHHHHHHHhhhC-
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLI-----------PYLFILSCRQALYLIATN-   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~-   68 (133)
                      +|||++.....++.++|+||  +|+++++|++|..|| .+.+.......+           ....+...  ........ 
T Consensus       189 ~aPE~~~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  263 (353)
T 2b9h_A          189 RAPEVMLTSAKYSRAMDVWS--CGCILAELFLRRPIF-PGRDYRHQLLLIFGIIGTPHSDNDLRCIESP--RAREYIKSL  263 (353)
T ss_dssp             CCHHHHHSCCCCCHHHHHHH--HHHHHHHHHHSSCSC-CCSSHHHHHHHHHHHHCCCCSTTTTTTCCCH--HHHHHHHTS
T ss_pred             cCCeeeccCCCccchhhHHH--HHHHHHHHHhCCCCC-CCCCcHHHHHHHHHHhCCCchhccccccccc--hhhHHhhcc
Confidence            58998445577889999999  999999999999999 543311100000           00000000  00000000 


Q ss_pred             C-CC--Ccc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          69 K-KP--EIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        69 ~-~~--~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      . .+  .+. .....++.+.+|+.+||..||.+|||+.++++||||+..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (353)
T 2b9h_A          264 PMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY  312 (353)
T ss_dssp             CCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             cCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence            0 00  000 013467899999999999999999999999999999754

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.59  E-value=9.3e-16  Score=109.90  Aligned_cols=95  Identities=23%  Similarity=0.319  Sum_probs=69.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh----CC-------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT----NK-------   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------   69 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .+.....               ....+..    ..       
T Consensus       186 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  246 (326)
T 1blx_A          186 RAPEV-LLQSSYATPVDLWS--VGCIFAEMFRRKPLF-RGSSDVD---------------QLGKILDVIGLPGEEDWPRD  246 (326)
T ss_dssp             CCHHH-HTTCCCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH---------------HHHHHHHHHCCCCGGGSCTT
T ss_pred             eCHHH-HhcCCCCcchhHHH--HHHHHHHHHcCCCCC-CCCCHHH---------------HHHHHHHHcCCCCcccCccc
Confidence            58999 77778999999999  999999999999999 5433211               1111110    00       


Q ss_pred             ------------CCCc-chhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          70 ------------KPEI-KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        70 ------------~~~~-~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                                  ...+ .....++..+.+|+.+||..||.+||++.++++||||+...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  304 (326)
T 1blx_A          247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE  304 (326)
T ss_dssp             CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             cccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccc
Confidence                        0000 00134678899999999999999999999999999998644

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.59  E-value=7.3e-16  Score=113.54  Aligned_cols=90  Identities=22%  Similarity=0.427  Sum_probs=71.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++|+|++|..|| .+.+...               ....+.. ....+  +..++
T Consensus       206 ~aPE~-~~~~~~~~~~Diws--lG~il~ell~G~~Pf-~~~~~~~---------------~~~~i~~-~~~~~--~~~~~  263 (373)
T 2r5t_A          206 LAPEV-LHKQPYDRTVDWWC--LGAVLYEMLYGLPPF-YSRNTAE---------------MYDNILN-KPLQL--KPNIT  263 (373)
T ss_dssp             CCHHH-HTTCCCCTHHHHHH--HHHHHHHHHHSSCTT-CCSBHHH---------------HHHHHHH-SCCCC--CSSSC
T ss_pred             cCHHH-hCCCCCCchhhhHH--HHHHHHHHHcCCCCC-CCCCHHH---------------HHHHHHh-cccCC--CCCCC
Confidence            68999 88888999999999  999999999999999 5543222               2223332 23333  34678


Q ss_pred             HHHHHHHHHHhhhcccccCCH----HHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASA----SLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~----~ell~h~~~~~  112 (133)
                      ..+++|+.+||..||.+|+++    .+++.||||+.
T Consensus       264 ~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~  299 (373)
T 2r5t_A          264 NSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL  299 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence            999999999999999999986    68999999974

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.59  E-value=2.4e-15  Score=112.36  Aligned_cols=36  Identities=25%  Similarity=0.332  Sum_probs=33.4

Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ..++.+.+|+.+||..||.+|+|++++|+||||+..
T Consensus       333 ~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  368 (432)
T 3n9x_A          333 SISDDGINLLESMLKFNPNKRITIDQALDHPYLKDV  368 (432)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTT
T ss_pred             CCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhc
Confidence            468899999999999999999999999999999864

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.59  E-value=5.8e-16  Score=110.70  Aligned_cols=94  Identities=24%  Similarity=0.363  Sum_probs=67.0

Q ss_pred             CCCccccCC-----------CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC-
Q psy9738           1 MAPEGGHHR-----------KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN-   68 (133)
Q Consensus         1 maPE~~~~~-----------~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   68 (133)
                      +|||+ +.+           ..++.++|+||  +|++++++++|..|| .......              .....+... 
T Consensus       195 ~aPE~-~~~~~~~~~~~~~~~~~~~~~Di~s--lG~il~el~~g~~pf-~~~~~~~--------------~~~~~~~~~~  256 (313)
T 3cek_A          195 MPPEA-IKDMSSSRENGKSKSKISPKSDVWS--LGCILYYMTYGKTPF-QQIINQI--------------SKLHAIIDPN  256 (313)
T ss_dssp             CCHHH-HTTCC----------CCCHHHHHHH--HHHHHHHHHHSSCTT-TTCCSHH--------------HHHHHHHCTT
T ss_pred             CCHHH-HhhcccccccccccccCCchHHHHH--HHHHHHHHHhCCCch-hhHHHHH--------------HHHHHHHhcc
Confidence            57888 543           46788999999  999999999999999 4322110              011111111 


Q ss_pred             CCCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          69 KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        69 ~~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ....+  +...+..+.+++.+||..||.+||++.++++||||+...
T Consensus       257 ~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          257 HEIEF--PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             SCCCC--CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             cccCC--cccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence            11222  344578899999999999999999999999999998643

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.59  E-value=8.6e-16  Score=111.80  Aligned_cols=106  Identities=15%  Similarity=0.139  Sum_probs=68.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHH-------------HHHHHhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCR-------------QALYLIAT   67 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~   67 (133)
                      +|||++.....++.++|+||  +|++++++++|..|| .+......     ...+....             ........
T Consensus       200 ~aPE~~~~~~~~~~~~Diws--lG~il~~l~~g~~pf-~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  271 (362)
T 3pg1_A          200 RAPELVMQFKGFTKLVDMWS--AGCVMAEMFNRKALF-RGSTFYNQ-----LNKIVEVVGTPKIEDVVMFSSPSARDYLR  271 (362)
T ss_dssp             CCHHHHTTCTTCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHHH-----HHHHHHHHCCCCHHHHHHTSCHHHHHHTT
T ss_pred             cCcHHhcCCCCCCcHhHHHh--HHHHHHHHHhCCCCC-CCCCHHHH-----HHHHHHHcCCCChHHhhhccchhhhHHHH
Confidence            68998334477899999999  999999999999999 54332110     00000000             00000000


Q ss_pred             CCCCCcc------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          68 NKKPEIK------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        68 ~~~~~~~------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ......+      .....++.+.+|+.+||..||.+|||+.++++||||+...
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          272 NSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             TCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             hhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence            0000000      0123578899999999999999999999999999998654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.58  E-value=2.8e-16  Score=117.16  Aligned_cols=94  Identities=17%  Similarity=0.365  Sum_probs=69.8

Q ss_pred             CCCccccCCCC----CCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcch
Q psy9738           1 MAPEGGHHRKQ----YGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKE   75 (133)
Q Consensus         1 maPE~~~~~~~----~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   75 (133)
                      ||||+ +....    |+.++|+||  +|+++|+|++|..|| .+.+...               ....+.... ...++.
T Consensus       236 ~APE~-l~~~~~~~~~~~~~DiwS--lGvilyell~G~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~p~  296 (410)
T 3v8s_A          236 ISPEV-LKSQGGDGYYGRECDWWS--VGVFLYEMLVGDTPF-YADSLVG---------------TYSKIMNHKNSLTFPD  296 (410)
T ss_dssp             CCHHH-HHTTTTTCEEETHHHHHH--HHHHHHHHHHSSCTT-CCSSHHH---------------HHHHHHTHHHHCCCCT
T ss_pred             cCHHH-hhccCCCcCCCCcceEec--chHHHHHHHhCCCCC-CCCChhh---------------HHHHHHhccccccCCC
Confidence            68999 54433    788999999  999999999999999 6544322               222222111 122222


Q ss_pred             hhhhcHHHHHHHHHHhhhcccc--cCCHHHHhcCcccccC
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVET--RASASLLLKHPFLKIA  113 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~--R~s~~ell~h~~~~~~  113 (133)
                      ...++..+++|+.+||..+|.+  |++++++++||||+..
T Consensus       297 ~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          297 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             cccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence            3457899999999999988888  9999999999999864

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.58  E-value=1.3e-15  Score=110.61  Aligned_cols=105  Identities=22%  Similarity=0.306  Sum_probs=68.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhh-----------------HHHHHH
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILS-----------------CRQALY   63 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~   63 (133)
                      +|||++.....++.++|+||  +|+++++|++|..|| .+.+... .    ...+..                 ......
T Consensus       190 ~aPE~~~~~~~~~~~~Di~s--lG~il~el~~g~~pf-~~~~~~~-~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
T 3coi_A          190 RAPEVILSWMHYNQTVDIWS--VGCIMAEMLTGKTLF-KGKDYLD-Q----LTQILKVTGVPGTEFVQKLNDKAAKSYIQ  261 (353)
T ss_dssp             SCHHHHSCCSCCCTTHHHHH--HHHHHHHHHHSSCSS-BSSCHHH-H----HHHHHHHHCBCCHHHHTTCSCHHHHHHHH
T ss_pred             CCHHHHhCcCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHH-H----HHHHHHHhCCCCHHHHHHHhhHHHHHHHH
Confidence            58998333477899999999  999999999999999 5433211 0    000000                 000000


Q ss_pred             HhhhCCCCCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          64 LIATNKKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        64 ~~~~~~~~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      .........+. .....++.+.+|+.+||..||.+|||+.++++||||+..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          262 SLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             TSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             hCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence            00000011110 013468899999999999999999999999999999753

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.58  E-value=2.1e-15  Score=108.30  Aligned_cols=110  Identities=17%  Similarity=0.253  Sum_probs=68.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC---CC------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK---KP------   71 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------   71 (133)
                      +|||++.....++.++|+||  +|+++++|++|..|| .......+.+. ..............+....   .+      
T Consensus       197 ~aPE~~~~~~~~~~~~Diws--lG~il~~ll~g~~p~-~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (330)
T 3nsz_A          197 KGPELLVDYQMYDYSLDMWS--LGCMLASMIFRKEPF-FHGHDNYDQLV-RIAKVLGTEDLYDYIDKYNIELDPRFNDIL  272 (330)
T ss_dssp             CCHHHHTTCCCCCTHHHHHH--HHHHHHHHHHTCSSS-SCCSSHHHHHH-HHHHHHCHHHHHHHHHHTTCCCCTHHHHHH
T ss_pred             cChhhhcCCCcCCchhhHHH--HHHHHHHHHhCCCCc-ccCCchHHHHH-HHHHhcCCchhhhHHHHhccccccchhhhh
Confidence            58998334477899999999  999999999999999 43322110000 0000000000000000000   00      


Q ss_pred             ------------CcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          72 ------------EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        72 ------------~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                                  ....+..+++.+.+|+.+||..||.+|||++++|+||||+...
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          273 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             CCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             hhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence                        0001223689999999999999999999999999999998654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.58  E-value=8.4e-16  Score=108.89  Aligned_cols=92  Identities=16%  Similarity=0.301  Sum_probs=71.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .......               ....+ ......+  +...+
T Consensus       182 ~aPE~-~~~~~~~~~~Di~s--lG~~l~~l~~g~~p~-~~~~~~~---------------~~~~~-~~~~~~~--~~~~~  239 (294)
T 2rku_A          182 IAPEV-LSKKGHSFEVDVWS--IGCIMYTLLVGKPPF-ETSCLKE---------------TYLRI-KKNEYSI--PKHIN  239 (294)
T ss_dssp             CCHHH-HTTSCBCTHHHHHH--HHHHHHHHHHSSCTT-CCSSHHH---------------HHHHH-HTTCCCC--CTTSC
T ss_pred             CCcch-hccCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHH-hhccCCC--ccccC
Confidence            58898 77778899999999  999999999999999 4332111               12222 2222333  44678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ..+.+++.+||..||.+||++.++++||||....
T Consensus       240 ~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  273 (294)
T 2rku_A          240 PVAASLIQKMLQTDPTARPTINELLNDEFFTSGY  273 (294)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHhhChheecCC
Confidence            8999999999999999999999999999997643

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.58  E-value=1.8e-15  Score=107.19  Aligned_cols=96  Identities=23%  Similarity=0.439  Sum_probs=69.7

Q ss_pred             CCCcccc-----CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcc
Q psy9738           1 MAPEGGH-----HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIK   74 (133)
Q Consensus         1 maPE~~~-----~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   74 (133)
                      +|||++.     ....++.++|+||  +|++++++++|..|| .+.+...               ....+.... ....+
T Consensus       190 ~aPE~~~~~~~~~~~~~~~~~Di~s--lG~~l~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~  251 (298)
T 1phk_A          190 LAPEIIECSMNDNHPGYGKEVDMWS--TGVIMYTLLAGSPPF-WHRKQML---------------MLRMIMSGNYQFGSP  251 (298)
T ss_dssp             CCHHHHHHHHCTTSCCBCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHTCCCCCTT
T ss_pred             cCHHHhccccccccccCCcccccHh--HHHHHHHHHHCCCCC-cCccHHH---------------HHHHHhcCCcccCcc
Confidence            5788722     2456788999999  999999999999999 5433211               222222221 11222


Q ss_pred             hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          75 EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        75 ~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      .....+..+.+++.+||..||.+||++.++++||||+...
T Consensus       252 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          252 EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             cccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            2346789999999999999999999999999999998643

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.58  E-value=7.1e-16  Score=108.34  Aligned_cols=92  Identities=15%  Similarity=0.268  Sum_probs=69.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch--hhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE--KEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~   78 (133)
                      +|||+ +.+ .++.++|+||  +|++++++++|..|| .+.....               ....+.... ...+.  ...
T Consensus       175 ~aPE~-~~~-~~~~~~Di~s--lG~~l~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~-~~~~~~~~~~  233 (277)
T 3f3z_A          175 VSPQV-LEG-LYGPECDEWS--AGVMMYVLLCGYPPF-SAPTDSE---------------VMLKIREGT-FTFPEKDWLN  233 (277)
T ss_dssp             CCHHH-HTT-CBCTTHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHCC-CCCCHHHHTT
T ss_pred             cChHH-hcc-cCCchhhehh--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHhCC-CCCCchhhhc
Confidence            57888 544 4889999999  999999999999999 5433221               222222222 22221  135


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      .++.+.+++.+||..||.+||++.++++||||+..
T Consensus       234 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          234 VSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence            78999999999999999999999999999999753

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.58  E-value=1.1e-15  Score=118.22  Aligned_cols=94  Identities=21%  Similarity=0.315  Sum_probs=73.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++|+|++|..|| .+.......            ..+.......+..+  +..++
T Consensus       352 ~APEv-l~~~~~~~~~DiwS--LGvilyeLltG~~PF-~~~~~~~~~------------~~i~~~i~~~~~~~--p~~~s  413 (576)
T 2acx_A          352 MAPEV-VKNERYTFSPDWWA--LGCLLYEMIAGQSPF-QQRKKKIKR------------EEVERLVKEVPEEY--SERFS  413 (576)
T ss_dssp             CCHHH-HTTCEESSHHHHHH--HHHHHHHHHHSSCSS-SCSSSCCCH------------HHHHHHHHHCCCCC--CTTSC
T ss_pred             cCHHH-HcCCCCCccchHHH--HHHHHHHHHhCCCCC-cccccchhH------------HHHHHHhhcccccC--CccCC
Confidence            68999 77888999999999  999999999999999 544322100            02222223333344  45688


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      +.+++|+.+||..||.+|+     ++.++++||||+.
T Consensus       414 ~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          414 PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence            9999999999999999999     7899999999985

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.58  E-value=5.1e-16  Score=109.28  Aligned_cols=92  Identities=18%  Similarity=0.329  Sum_probs=70.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc--hhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK--EKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   78 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .+.....               ....+.. ......  ....
T Consensus       178 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~~~~-~~~~~~~~~~~~  237 (283)
T 3bhy_A          178 VAPEI-VNYEPLGLEADMWS--IGVITYILLSGASPF-LGETKQE---------------TLTNISA-VNYDFDEEYFSN  237 (283)
T ss_dssp             CCHHH-HTTCCCCTHHHHHH--HHHHHHHHHHSSCTT-CCSSHHH---------------HHHHHHT-TCCCCCHHHHTT
T ss_pred             cCcce-ecCCCCCcchhhhh--HHHHHHHHHHCCCCC-CCcchHH---------------HHHHhHh-cccCCcchhccc
Confidence            58998 77788999999999  999999999999999 5433211               2222222 222221  1245


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      .+..+.+|+.+||..||.+||++.++++||||+.
T Consensus       238 ~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  271 (283)
T 3bhy_A          238 TSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA  271 (283)
T ss_dssp             CCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred             CCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHH
Confidence            6888999999999999999999999999999975

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.58  E-value=6e-16  Score=111.91  Aligned_cols=92  Identities=16%  Similarity=0.296  Sum_probs=70.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++|..|| .......               ....+.. ....+  +...+
T Consensus       208 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~---------------~~~~~~~-~~~~~--~~~~~  265 (335)
T 2owb_A          208 IAPEV-LSKKGHSFEVDVWS--IGCIMYTLLVGKPPF-ETSCLKE---------------TYLRIKK-NEYSI--PKHIN  265 (335)
T ss_dssp             CCHHH-HHTSCBCTHHHHHH--HHHHHHHHHHSSCTT-CCSSHHH---------------HHHHHHH-TCCCC--CTTSC
T ss_pred             cCHHH-hccCCCCchhhHHH--HHHHHHHHHHCcCCC-CCCCHHH---------------HHHHHhc-CCCCC--CccCC
Confidence            58898 77778889999999  999999999999999 4332111               1222222 22233  34678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ..+.+|+.+||..||.+||++.++++|+||....
T Consensus       266 ~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~  299 (335)
T 2owb_A          266 PVAASLIQKMLQTDPTARPTINELLNDEFFTSGY  299 (335)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCccccCCC
Confidence            8999999999999999999999999999997654

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.58  E-value=1.3e-16  Score=117.15  Aligned_cols=86  Identities=14%  Similarity=0.137  Sum_probs=65.1

Q ss_pred             CCCccccCCC-----------CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC
Q psy9738           1 MAPEGGHHRK-----------QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK   69 (133)
Q Consensus         1 maPE~~~~~~-----------~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (133)
                      ||||+ +.+.           .|+.++|+||  +|+++++|++|..|| .+.....               ....+. ..
T Consensus       269 ~aPE~-~~~~~~~~~~~~~~~~~~~~~DvwS--lG~il~elltg~~Pf-~~~~~~~---------------~~~~~~-~~  328 (377)
T 3byv_A          269 EPPEL-EARRATISYHRDRRTLMTFSFDAWA--LGLVIYWIWCADLPI-TKDAALG---------------GSEWIF-RS  328 (377)
T ss_dssp             CCHHH-HHHHTSTHHHHCCEEECCHHHHHHH--HHHHHHHHHHSSCCC-------C---------------CSGGGG-SS
T ss_pred             cChhh-hcccccccccccccccCChhhhHHH--HHHHHHHHHHCCCCC-ccccccc---------------chhhhh-hh
Confidence            68898 6555           7899999999  999999999999999 5433222               111111 11


Q ss_pred             CCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          70 KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        70 ~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                            ...+++.+.+|+.+||..||.+||++.++++||||+.
T Consensus       329 ------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          329 ------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             ------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             ------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence                  1346788999999999999999999999999999974

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.58  E-value=6.9e-16  Score=112.32  Aligned_cols=109  Identities=21%  Similarity=0.348  Sum_probs=71.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcc---------------------------cchhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHF---------------------------LIPYL   53 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~---------------------------~~~~~   53 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++|..|| ...+......                           .....
T Consensus       197 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (360)
T 3eqc_A          197 MSPER-LQGTHYSVQSDIWS--MGLSLVEMAVGRYPI-PPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSR  272 (360)
T ss_dssp             CCHHH-HTTCCCSHHHHHHH--HHHHHHHHHHTSCCS-SCCCHHHHHHHHC-----------------------------
T ss_pred             ECHHH-HcCCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCC
Confidence            68999 77888999999999  999999999999999 4322100000                           00000


Q ss_pred             HHhhHHHHHHHhhhCCCCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          54 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ...........+.....+... ...++..+.+|+.+||..||.+|||+.++++||||+...
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  332 (360)
T 3eqc_A          273 PPMAIFELLDYIVNEPPPKLP-SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  332 (360)
T ss_dssp             -CCCHHHHHHHHHHSCCCCCC-TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             CcccchhhhhHHhccCCCCCC-cccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence            000000111222222222221 234688999999999999999999999999999998643

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.57  E-value=3.9e-16  Score=110.37  Aligned_cols=97  Identities=27%  Similarity=0.453  Sum_probs=68.0

Q ss_pred             CCCccccCCC--CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHRK--QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~--~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      +|||+ +.+.  .++.++|+||  +|++++++++|..|| .......             ............+.+  +..
T Consensus       190 ~aPE~-~~~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~-------------~~~~~~~~~~~~~~~--~~~  250 (295)
T 2clq_A          190 MAPEI-IDKGPRGYGKAADIWS--LGCTIIEMATGKPPF-YELGEPQ-------------AAMFKVGMFKVHPEI--PES  250 (295)
T ss_dssp             CCHHH-HHHGGGGCSHHHHHHH--HHHHHHHHHHTSCTT-GGGSSHH-------------HHHHHHHHHCCCCCC--CTT
T ss_pred             cChhh-hcCCCCCCCcHHHHHH--HHHHHHHHHHCCCCc-cCCCchh-------------HHHHhhccccccccc--ccc
Confidence            57888 5433  3788999999  999999999999999 4322111             001111111222333  456


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  116 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~  116 (133)
                      .+..+.+++.+||..||.+||++.++++||||+.....
T Consensus       251 ~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~  288 (295)
T 2clq_A          251 MSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKK  288 (295)
T ss_dssp             SCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC----
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcccc
Confidence            78999999999999999999999999999999865543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.57  E-value=1.1e-15  Score=108.62  Aligned_cols=92  Identities=20%  Similarity=0.231  Sum_probs=68.3

Q ss_pred             CCCccccCCCC--CCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHRKQ--YGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~--~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      +|||+ +.+..  ++.++|+||  +|++++++++|..|| .+.+...               ....+.. ....+  +..
T Consensus       178 ~aPE~-~~~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~---------------~~~~i~~-~~~~~--~~~  235 (305)
T 2wtk_C          178 QPPEI-ANGLDTFSGFKVDIWS--AGVTLYNITTGLYPF-EGDNIYK---------------LFENIGK-GSYAI--PGD  235 (305)
T ss_dssp             CCHHH-HTCCSCEESHHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH---------------HHHHHHH-CCCCC--CSS
T ss_pred             cChhh-ccCcccCCcchhhHHH--HHHHHHHHHhCCCCC-CCchHHH---------------HHHHHhc-CCCCC--CCc
Confidence            57888 54433  366899999  999999999999999 5432111               2222222 22333  345


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      .+..+.+|+.+||..||.+||++.++++||||+...
T Consensus       236 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  271 (305)
T 2wtk_C          236 CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH  271 (305)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred             cCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCC
Confidence            788999999999999999999999999999997544

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.56  E-value=2.3e-15  Score=115.73  Aligned_cols=94  Identities=23%  Similarity=0.356  Sum_probs=71.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++|+|++|..|| .+.......           . .+..........+  +..++
T Consensus       356 ~APE~-l~~~~~~~~~DiwS--lGvilyelltG~~PF-~~~~~~~~~-----------~-~~~~~i~~~~~~~--p~~~s  417 (543)
T 3c4z_A          356 MAPEL-LLGEEYDFSVDYFA--LGVTLYEMIAARGPF-RARGEKVEN-----------K-ELKQRVLEQAVTY--PDKFS  417 (543)
T ss_dssp             SCHHH-HTTCCBCTHHHHHH--HHHHHHHHHHSSCSS-CCTTCCCCH-----------H-HHHHHHHHCCCCC--CTTSC
T ss_pred             cChhh-hcCCCCChHHhcCc--chHHHHHHHhCCCCC-CCCccchhH-----------H-HHHHHHhhcccCC--CcccC
Confidence            68999 77888999999999  999999999999999 554322100           0 1222222223333  45678


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~  112 (133)
                      +.+.+|+.+||..||.+|++     +++++.||||+.
T Consensus       418 ~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~  454 (543)
T 3c4z_A          418 PASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD  454 (543)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred             HHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence            99999999999999999995     588999999985

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.56  E-value=2.5e-15  Score=112.40  Aligned_cols=91  Identities=18%  Similarity=0.277  Sum_probs=66.4

Q ss_pred             CCCccccCC-------CCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC---
Q psy9738           1 MAPEGGHHR-------KQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK---   69 (133)
Q Consensus         1 maPE~~~~~-------~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   69 (133)
                      ||||+ +.+       ..++.++||||  +||++++|++ |..|| .... ..                ...+....   
T Consensus       199 ~aPE~-~~~~~~~~~~~~~~~~~DiwS--lG~il~ellt~g~~Pf-~~~~-~~----------------~~~i~~~~~~~  257 (434)
T 2rio_A          199 RAPEL-LEESNNLQTKRRLTRSIDIFS--MGCVFYYILSKGKHPF-GDKY-SR----------------ESNIIRGIFSL  257 (434)
T ss_dssp             SCHHH-HSCCCTTSCCCCCCTHHHHHH--HHHHHHHHHTTSCCTT-CSTT-TH----------------HHHHHHTCCCC
T ss_pred             cCHHH-hccccccccccCcchhhhhHh--HHHHHHHHHhCCCCCC-CCch-hh----------------HHHHhcCCCCc
Confidence            68998 543       56889999999  9999999998 89999 4322 11                11111111   


Q ss_pred             -CCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          70 -KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        70 -~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                       ..........+..+.+++.+||..||.+|||+.++++||||..
T Consensus       258 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          258 DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence             1111112356788999999999999999999999999999964

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.56  E-value=1.5e-15  Score=110.04  Aligned_cols=86  Identities=16%  Similarity=0.275  Sum_probs=66.8

Q ss_pred             CCCccccCCCCC-CCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQY-GPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~-~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..+ +.++|+||  +|++++++++|..|| ......                     . .....  .+...
T Consensus       196 ~aPE~-~~~~~~~~~~~Diws--lG~il~el~~g~~pf-~~~~~~---------------------~-~~~~~--~~~~~  247 (335)
T 3dls_A          196 CAPEV-LMGNPYRGPELEMWS--LGVTLYTLVFEENPF-CELEET---------------------V-EAAIH--PPYLV  247 (335)
T ss_dssp             CCHHH-HTTCCBCSHHHHHHH--HHHHHHHHHHSSCSC-SSGGGG---------------------T-TTCCC--CSSCC
T ss_pred             cChhh-hcCCCCCCCcccchh--HHHHHHHHHhCCCch-hhHHHH---------------------H-hhccC--CCccc
Confidence            68999 666666 77899999  999999999999999 431110                     0 01111  13346


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      +..+.+|+.+||..||.+||++.++++||||+...
T Consensus       248 ~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  282 (335)
T 3dls_A          248 SKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV  282 (335)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence            88999999999999999999999999999997643

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.56  E-value=9.3e-16  Score=111.09  Aligned_cols=98  Identities=14%  Similarity=0.212  Sum_probs=60.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC-CCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN-KKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   79 (133)
                      +|||+ +....++.++|+||  +|++++++++|..|| .+.........           ....+... ...........
T Consensus       196 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~  260 (336)
T 3fhr_A          196 VAPEV-LGPEKYDKSCDMWS--LGVIMYILLCGFPPF-YSNTGQAISPG-----------MKRRIRLGQYGFPNPEWSEV  260 (336)
T ss_dssp             ---------CHHHHHHHHHH--HHHHHHHHHHSSCCC---------------------------------CCCTTTSTTC
T ss_pred             cChhh-hCCCCCCchhhHHH--HHHHHHHHHHCCCCC-CCccchhhhhh-----------HHHhhhccccccCchhhccC
Confidence            58999 77778889999999  999999999999999 44332110000           00001100 01111112457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      +..+.+|+.+||..||.+|||+.++++||||+..
T Consensus       261 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          261 SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence            8999999999999999999999999999999753

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.55  E-value=1.8e-15  Score=108.69  Aligned_cols=94  Identities=24%  Similarity=0.479  Sum_probs=60.8

Q ss_pred             CCCcccc----CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch-
Q psy9738           1 MAPEGGH----HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE-   75 (133)
Q Consensus         1 maPE~~~----~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   75 (133)
                      +|||+ +    .+..++.++|+||  +|+++++|++|..|| .+.....+              ....+.....+.+.. 
T Consensus       192 ~aPE~-~~~~~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~~--------------~~~~~~~~~~~~~~~~  253 (327)
T 3aln_A          192 MAPER-IDPSASRQGYDVRSDVWS--LGITLYELATGRFPY-PKWNSVFD--------------QLTQVVKGDPPQLSNS  253 (327)
T ss_dssp             ---------------CCSHHHHHH--HHHHHHHHHHSCCCS-SCC---------------------CCCCCSCCCCCCCC
T ss_pred             cCcee-eccccCcCCCCchhhHHH--HHHHHHHHHHCCCCC-CCcchHHH--------------HHHHHhcCCCCCCCCc
Confidence            58999 5    4567889999999  999999999999999 44322110              111122222222211 


Q ss_pred             -hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          76 -KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        76 -~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                       ....++.+.+|+.+||..||.+||++.++++||||..
T Consensus       254 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~  291 (327)
T 3aln_A          254 EEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILM  291 (327)
T ss_dssp             SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHH
Confidence             2346889999999999999999999999999999975

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.54  E-value=7.6e-15  Score=107.06  Aligned_cols=94  Identities=15%  Similarity=0.304  Sum_probs=67.4

Q ss_pred             CCCccccCC--CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHR--KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~--~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      ||||+ +.+  ..++.++|+||  +|+++++|++|..|| .........           . .+........+.+  +..
T Consensus       227 ~aPE~-~~~~~~~~~~~~Dvws--lG~il~ell~g~~pf-~~~~~~~~~-----------~-~~~~~~~~~~~~~--~~~  288 (355)
T 1vzo_A          227 MAPDI-VRGGDSGHDKAVDWWS--LGVLMYELLTGASPF-TVDGEKNSQ-----------A-EISRRILKSEPPY--PQE  288 (355)
T ss_dssp             CCHHH-HTTCC---CTHHHHHH--HHHHHHHHHHSSCTT-SCTTSCCCH-----------H-HHHHHHHHCCCCC--CTT
T ss_pred             cChhh-hcCCCCCCCchhhHHH--HHHHHHHHHHCCCCC-ccCCccchH-----------H-HHHHHHhccCCCC--Ccc
Confidence            68999 543  45788999999  999999999999999 543322200           0 1111111222333  446


Q ss_pred             hcHHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      ++..+.+|+.+||..||.+||     ++.++++|+||+.
T Consensus       289 ~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~  327 (355)
T 1vzo_A          289 MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  327 (355)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence            788999999999999999999     9999999999975

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.54  E-value=1.2e-15  Score=109.16  Aligned_cols=89  Identities=16%  Similarity=0.226  Sum_probs=66.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|+ ....  .               ..........+..  ....+
T Consensus       243 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~~~~~~~-~~~~--~---------------~~~~~~~~~~~~~--~~~~~  299 (332)
T 3qd2_B          243 MSPEQ-IHGNNYSHKVDIFS--LGLILFELLYSFSTQ-MERV--R---------------IITDVRNLKFPLL--FTQKY  299 (332)
T ss_dssp             SCHHH-HHCCCCCTHHHHHH--HHHHHHHHHSCCCCH-HHHH--H---------------HHHHHHTTCCCHH--HHHHC
T ss_pred             cChHH-hcCCCCcchhhHHH--HHHHHHHHHHcCCCh-hHHH--H---------------HHHHhhccCCCcc--cccCC
Confidence            58998 77788999999999  999999999986655 1100  0               1112222221221  34567


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      +.+.+|+.+||..||.+||++.++++||||+.
T Consensus       300 ~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          300 PQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             HHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             hhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence            88899999999999999999999999999974

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.53  E-value=2.9e-15  Score=111.68  Aligned_cols=90  Identities=23%  Similarity=0.416  Sum_probs=66.4

Q ss_pred             CCCccccC-------CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh----CC
Q psy9738           1 MAPEGGHH-------RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT----NK   69 (133)
Q Consensus         1 maPE~~~~-------~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~   69 (133)
                      ||||+ +.       ...|+.++|+||  +|+++|+|++|..|| .+.+...               ....+..    ..
T Consensus       230 ~APE~-l~~~~~~~~~~~~~~~~DiwS--lGvilyelltG~~Pf-~~~~~~~---------------~~~~i~~~~~~~~  290 (412)
T 2vd5_A          230 LSPEI-LQAVGGGPGTGSYGPECDWWA--LGVFAYEMFYGQTPF-YADSTAE---------------TYGKIVHYKEHLS  290 (412)
T ss_dssp             CCHHH-HHHHHTCTTCSEECTHHHHHH--HHHHHHHHHHSSCTT-CCSSHHH---------------HHHHHHTHHHHCC
T ss_pred             CCHHH-HhhcccCcCCCCCChHHhhhH--HhHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhcccCcC
Confidence            68998 53       456899999999  999999999999999 5543222               2222221    11


Q ss_pred             CCCcchhhhhcHHHHHHHHHHhhhccccc---CCHHHHhcCccccc
Q psy9738          70 KPEIKEKEKLSQIFQDFLDQCLEEEVETR---ASASLLLKHPFLKI  112 (133)
Q Consensus        70 ~~~~~~~~~~~~~~~~ll~~~L~~~p~~R---~s~~ell~h~~~~~  112 (133)
                      .+..  +..+++.+++|+.+||. +|.+|   ++++++++||||+.
T Consensus       291 ~p~~--~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~  333 (412)
T 2vd5_A          291 LPLV--DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFG  333 (412)
T ss_dssp             CC------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTT
T ss_pred             CCcc--ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCC
Confidence            1222  24578999999999999 99998   58999999999975

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.52  E-value=2.5e-15  Score=108.05  Aligned_cols=87  Identities=17%  Similarity=0.329  Sum_probs=66.8

Q ss_pred             CCCccccCCCCC-CCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQY-GPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~-~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..+ +.++|+||  +|++++++++|..|| ....                     .+.... ..+  +..+
T Consensus       215 ~aPE~-~~~~~~~~~~~Di~s--lG~il~el~~g~~pf-~~~~---------------------~~~~~~-~~~--~~~~  266 (320)
T 3a99_A          215 SPPEW-IRYHRYHGRSAAVWS--LGILLYDMVCGDIPF-EHDE---------------------EIIRGQ-VFF--RQRV  266 (320)
T ss_dssp             SCHHH-HHHSCBCHHHHHHHH--HHHHHHHHHHSSCSC-CSHH---------------------HHHHCC-CCC--SSCC
T ss_pred             CChHH-hccCCCCCccchHHh--HHHHHHHHHHCCCCC-CChh---------------------hhhccc-ccc--cccC
Confidence            58888 544444 67899999  999999999999999 3211                     111111 112  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                      +..+.+|+.+||..||.+||++.++++||||+....
T Consensus       267 ~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  302 (320)
T 3a99_A          267 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL  302 (320)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccC
Confidence            889999999999999999999999999999987554

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.52  E-value=5.9e-15  Score=105.78  Aligned_cols=93  Identities=13%  Similarity=0.191  Sum_probs=66.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       206 ~aPE~-~~~~~~~~~~Di~s--lG~il~ell~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  264 (323)
T 3qup_A          206 LALES-LADNLYTVHSDVWA--FGVTMWEIMTRGQTPY-AGIENAE---------------IYNYLIGGNRLKQ--PPEC  264 (323)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCTT-TTCCGGG---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cCchh-hcCCCCCCccchhh--HHHHHHHHHhCCCCCc-cccChHH---------------HHHHHhcCCCCCC--CCcc
Confidence            57888 77778899999999  9999999999 89999 5444333               3333333332333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCC-------HHHHhcCcccccCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRAS-------ASLLLKHPFLKIAR  114 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s-------~~ell~h~~~~~~~  114 (133)
                      +..+.+++.+||..||.+||+       .++++.|+|+....
T Consensus       265 ~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~  306 (323)
T 3qup_A          265 MEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS  306 (323)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-------
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCC
Confidence            899999999999999999999       56677899987643

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.51  E-value=3.1e-15  Score=112.32  Aligned_cols=93  Identities=19%  Similarity=0.404  Sum_probs=68.4

Q ss_pred             CCCccccC-----CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcc
Q psy9738           1 MAPEGGHH-----RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIK   74 (133)
Q Consensus         1 maPE~~~~-----~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   74 (133)
                      ||||+ +.     ...|+.++|+||  +|+++++|++|..|| .+.+...               ....+.... ...++
T Consensus       243 ~APE~-l~~~~~~~~~~~~~~DvwS--lGvil~elltG~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~p  303 (437)
T 4aw2_A          243 ISPEI-LQAMEGGKGRYGPECDWWS--LGVCMYEMLYGETPF-YAESLVE---------------TYGKIMNHKERFQFP  303 (437)
T ss_dssp             CCHHH-HHHHHTSCCEECTHHHHHH--HHHHHHHHHHSSCTT-CCSSHHH---------------HHHHHHTHHHHCCCC
T ss_pred             eChHH-HhhcccCCCCCCCcCeeHH--HHHHHHHHHhCCCCC-CCCChhH---------------HHHhhhhccccccCC
Confidence            68998 53     567899999999  999999999999999 6543222               222222110 11111


Q ss_pred             h-hhhhcHHHHHHHHHHhhhcccc--cCCHHHHhcCccccc
Q psy9738          75 E-KEKLSQIFQDFLDQCLEEEVET--RASASLLLKHPFLKI  112 (133)
Q Consensus        75 ~-~~~~~~~~~~ll~~~L~~~p~~--R~s~~ell~h~~~~~  112 (133)
                      . ...+++.+++|+.+||..+|.+  |++++++++||||++
T Consensus       304 ~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~  344 (437)
T 4aw2_A          304 TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSG  344 (437)
T ss_dssp             SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTT
T ss_pred             cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCC
Confidence            1 1347899999999999888887  999999999999975

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.51  E-value=1.6e-15  Score=112.90  Aligned_cols=86  Identities=15%  Similarity=0.132  Sum_probs=66.5

Q ss_pred             CCCcccc----------CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC
Q psy9738           1 MAPEGGH----------HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK   70 (133)
Q Consensus         1 maPE~~~----------~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (133)
                      ||||+ +          ....|+.++|+||  +|+++++|++|+.|| .+.+...               ....+ ... 
T Consensus       274 ~aPE~-~~~~~~~~~~~~~~~~~~~~DvwS--lGvil~elltg~~Pf-~~~~~~~---------------~~~~~-~~~-  332 (413)
T 3dzo_A          274 APPET-TAERMLPFGQHHPTLMTFAFDTWT--LGLAIYWIWCADLPN-TDDAALG---------------GSEWI-FRS-  332 (413)
T ss_dssp             CCHHH-HHHHTSTTGGGCCEEECHHHHHHH--HHHHHHHHHHSSCCC-CTTGGGS---------------CSGGG-GSS-
T ss_pred             eCchh-hhccccccccccCcCCCchhhHHH--HHHHHHHHHHCCCCC-CCcchhh---------------hHHHH-Hhh-
Confidence            68998 5          5556888999999  999999999999999 5433222               11111 111 


Q ss_pred             CCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          71 PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        71 ~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                           ...++..+.+|+.+||..||.+||++.++++||||+.
T Consensus       333 -----~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          333 -----CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             -----CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             -----cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence                 1245788999999999999999999999999999963

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.50  E-value=5.3e-15  Score=105.54  Aligned_cols=93  Identities=19%  Similarity=0.344  Sum_probs=65.0

Q ss_pred             CCCccccCCCCC-CCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQY-GPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~-~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..+ +.++|+||  +|++++++++|..|| ....                  .   +.. ....+  +...
T Consensus       205 ~aPE~-~~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~------------------~---~~~-~~~~~--~~~~  256 (312)
T 2iwi_A          205 SPPEW-ISRHQYHALPATVWS--LGILLYDMVCGDIPF-ERDQ------------------E---ILE-AELHF--PAHV  256 (312)
T ss_dssp             SCHHH-HHHSCBCHHHHHHHH--HHHHHHHHHHSSCSC-CSHH------------------H---HHH-TCCCC--CTTS
T ss_pred             cCcee-eecCCCCCccchHHH--HHHHHHHHHHCCCCC-CChH------------------H---Hhh-hccCC--cccC
Confidence            57888 544455 45899999  999999999999999 3211                  1   111 11222  3457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhH
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTP  121 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~  121 (133)
                      +..+.+++.+||..||.+||++.++++||||+.......+.+
T Consensus       257 ~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~~~~~~~  298 (312)
T 2iwi_A          257 SPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNP  298 (312)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---------
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchhcccccc
Confidence            889999999999999999999999999999987665444433

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.49  E-value=1e-14  Score=103.08  Aligned_cols=92  Identities=15%  Similarity=0.300  Sum_probs=63.9

Q ss_pred             CCCccccC-CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC---CCCCcchh
Q psy9738           1 MAPEGGHH-RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN---KKPEIKEK   76 (133)
Q Consensus         1 maPE~~~~-~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~   76 (133)
                      +|||+ +. ...++.++|+||  +|++++++++   || .......              .....+...   .++.+  +
T Consensus       197 ~aPE~-~~~~~~~~~~~Di~s--lG~il~~l~~---p~-~~~~~~~--------------~~~~~~~~~~~~~~~~~--~  253 (303)
T 1zy4_A          197 VATEV-LDGTGHYNEKIDMYS--LGIIFFEMIY---PF-STGMERV--------------NILKKLRSVSIEFPPDF--D  253 (303)
T ss_dssp             SCHHH-HTSCSCCCTHHHHHH--HHHHHHHHHS---CC-SSHHHHH--------------HHHHHHHSTTCCCCTTC--C
T ss_pred             cCccc-ccCCCCCcchhhHHH--HHHHHHHHHh---cc-CCchhHH--------------HHHHhccccccccCccc--c
Confidence            58898 54 447889999999  9999999997   55 2111000              011111111   11222  2


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                      ...+..+.+++.+||..||.+|||+.++++||||+....
T Consensus       254 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  292 (303)
T 1zy4_A          254 DNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQ  292 (303)
T ss_dssp             TTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCCH
T ss_pred             ccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCCh
Confidence            456778999999999999999999999999999986443

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.48  E-value=1.8e-14  Score=103.22  Aligned_cols=92  Identities=22%  Similarity=0.335  Sum_probs=68.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhh-hCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIA-TNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .+.+...               ....+. ......+  +..+
T Consensus       206 ~aPE~-~~~~~~~~~~Diws--lG~il~elltg~~Pf-~~~~~~~---------------~~~~~~~~~~~~~~--~~~~  264 (309)
T 3p86_A          206 MAPEV-LRDEPSNEKSDVYS--FGVILWELATLQQPW-GNLNPAQ---------------VVAAVGFKCKRLEI--PRNL  264 (309)
T ss_dssp             SCHHH-HTTCCCCTTHHHHH--HHHHHHHHHHCCCTT-TTSCHHH---------------HHHHHHHSCCCCCC--CTTS
T ss_pred             cChhh-hcCCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhcCCCCCC--CccC
Confidence            68999 77888999999999  999999999999999 5433221               222221 2222333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc--CcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK--HPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~--h~~~~~~  113 (133)
                      ++.+.+++.+||..||.+||++.++++  .++++..
T Consensus       265 ~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~  300 (309)
T 3p86_A          265 NPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA  300 (309)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence            899999999999999999999999875  4555543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.46  E-value=5.3e-15  Score=105.75  Aligned_cols=93  Identities=16%  Similarity=0.368  Sum_probs=70.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.....               .......... +.......+
T Consensus       186 ~aPE~-~~~~~~~~~~Di~s--lG~~l~~ll~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  246 (311)
T 3ork_A          186 LSPEQ-ARGDSVDARSDVYS--LGCVLYEVLTGEPPF-TGDSPVS---------------VAYQHVREDPIPPSARHEGL  246 (311)
T ss_dssp             CCHHH-HHTCCCCHHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH---------------HHHHHHHCCCCCHHHHSTTC
T ss_pred             CCHHH-hcCCCCCchHhHHH--HHHHHHHHHhCCCCC-CCCChHH---------------HHHHHhcCCCCCcccccCCC
Confidence            68999 77778999999999  999999999999999 5443222               2222222222 111112347


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      +..+.+++.+||..||.+||++.+++.|+|++.
T Consensus       247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            889999999999999999999999999999863

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.46  E-value=3.5e-14  Score=104.19  Aligned_cols=85  Identities=13%  Similarity=0.226  Sum_probs=65.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++ |..|| .+.....               ....+.....+..  +...
T Consensus       272 ~aPE~-~~~~~~~~~~Dvws--lG~il~ellt~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  330 (370)
T 2psq_A          272 MAPEA-LFDRVYTHQSDVWS--FGVLMWEIFTLGGSPY-PGIPVEE---------------LFKLLKEGHRMDK--PANC  330 (370)
T ss_dssp             CCHHH-HHTCCCCHHHHHHH--HHHHHHHHHTTSCCSS-TTCCGGG---------------HHHHHHTTCCCCC--CTTS
T ss_pred             ECHhH-hcCCCCCcHHHHHH--HHHHHHHHHcCCCCCC-CCCCHHH---------------HHHHHhcCCCCCC--CCCC
Confidence            68999 77788999999999  9999999998 99999 5433222               2223333333333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       331 ~~~l~~li~~~l~~dP~~Rpt~~ell~  357 (370)
T 2psq_A          331 TNELYMMMRDCWHAVPSQRPTFKQLVE  357 (370)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            889999999999999999999999875

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.45  E-value=3.1e-14  Score=100.30  Aligned_cols=85  Identities=12%  Similarity=0.216  Sum_probs=65.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +....++.++|+||  +|++++++++ |..|| .+.....               ....+.......+  +...
T Consensus       184 ~aPE~-~~~~~~~~~~Di~s--lG~~l~ell~~g~~pf-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  242 (281)
T 1mp8_A          184 MAPES-INFRRFTSASDVWM--FGVCMWEILMHGVKPF-QGVKNND---------------VIGRIENGERLPM--PPNC  242 (281)
T ss_dssp             CCHHH-HHHCCCSHHHHHHH--HHHHHHHHHTTSCCTT-TTCCGGG---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cChhh-cccCCCCCccCchH--HHHHHHHHHhcCCCCC-CcCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            58898 76778899999999  9999999996 99999 5443332               3333333333333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++.+.+++.+||..||.+||++.++++
T Consensus       243 ~~~l~~li~~~l~~~p~~Rps~~~l~~  269 (281)
T 1mp8_A          243 PPTLYSLMTKCWAYDPSRRPRFTELKA  269 (281)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            899999999999999999999999874

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.45  E-value=1.6e-14  Score=105.90  Aligned_cols=89  Identities=13%  Similarity=0.256  Sum_probs=68.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++ |..|| .+.....               ....+........  +...
T Consensus       253 ~aPE~-~~~~~~~~~~Dvws--lG~il~ellt~g~~pf-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  311 (367)
T 3l9p_A          253 MPPEA-FMEGIFTSKTDTWS--FGVLLWEIFSLGYMPY-PSKSNQE---------------VLEFVTSGGRMDP--PKNC  311 (367)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCSS-TTCCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             ECHHH-hcCCCCCcHHHHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CccC
Confidence            68998 77778999999999  9999999998 99999 4433221               2233333332333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      +..+.+++.+||..||.+||++.+++++.+.
T Consensus       312 ~~~l~~li~~~l~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          312 PGPVYRIMTQCWQHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            8899999999999999999999999987654

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.44  E-value=4e-14  Score=99.60  Aligned_cols=85  Identities=9%  Similarity=0.263  Sum_probs=64.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .......               ....+........  +...
T Consensus       181 ~aPE~-~~~~~~~~~~Di~s--lG~il~~llt~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  239 (281)
T 3cc6_A          181 MSPES-INFRRFTTASDVWM--FAVCMWEILSFGKQPF-FWLENKD---------------VIGVLEKGDRLPK--PDLC  239 (281)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTTCCTT-TTSCGGG---------------HHHHHHHTCCCCC--CTTC
T ss_pred             eCchh-hccCCCCchhccHH--HHHHHHHHHhCCCCCc-ccCChHH---------------HHHHHhcCCCCCC--CCCC
Confidence            58898 66778899999999  9999999998 99999 5433322               2222333322222  3457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++.+.+++.+||..||.+||++.++++
T Consensus       240 ~~~l~~li~~~l~~~p~~Rps~~ell~  266 (281)
T 3cc6_A          240 PPVLYTLMTRCWDYDPSDRPRFTELVC  266 (281)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCCchhCcCHHHHHH
Confidence            889999999999999999999999875

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.44  E-value=2.7e-14  Score=99.91  Aligned_cols=86  Identities=20%  Similarity=0.259  Sum_probs=65.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       174 ~aPE~-~~~~~~~~~~Di~s--lG~~l~~ll~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  232 (269)
T 4hcu_A          174 ASPEV-FSFSRYSSKSDVWS--FGVLMWEVFSEGKIPY-ENRSNSE---------------VVEDISTGFRLYK--PRLA  232 (269)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCTT-TTCCHHH---------------HHHHHHTTCCCCC--CTTS
T ss_pred             CCHHH-hcCCCCCchhhhHH--HHHHHHHHhcCCCCCC-CCCCHHH---------------HHHHHhcCccCCC--CCcC
Confidence            58898 77778899999999  9999999999 89999 4432221               2223333222222  4557


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      +..+.+++.+||..||.+||++.++++|
T Consensus       233 ~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          233 STHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            8999999999999999999999998854

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.44  E-value=3.7e-14  Score=99.14  Aligned_cols=87  Identities=20%  Similarity=0.353  Sum_probs=65.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .+.+...               ......... .....+...+
T Consensus       181 ~aPE~-~~~~~~~~~~Di~s--lG~~l~~l~~g~~p~-~~~~~~~---------------~~~~~~~~~-~~~~~~~~~~  240 (271)
T 3dtc_A          181 MAPEV-IRASMFSKGSDVWS--YGVLLWELLTGEVPF-RGIDGLA---------------VAYGVAMNK-LALPIPSTCP  240 (271)
T ss_dssp             SCHHH-HHHCCCSHHHHHHH--HHHHHHHHHHCCCTT-TTSCHHH---------------HHHHHHTSC-CCCCCCTTCC
T ss_pred             eCHHH-hccCCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHhhhcCC-CCCCCCcccC
Confidence            58888 76778899999999  999999999999999 5433221               222222222 1122245678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      ..+.+++.+||..||.+||++.+++++
T Consensus       241 ~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          241 EPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            999999999999999999999998753

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.44  E-value=3.8e-14  Score=101.58  Aligned_cols=94  Identities=18%  Similarity=0.335  Sum_probs=64.6

Q ss_pred             CCCccccC--------CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCC-
Q psy9738           1 MAPEGGHH--------RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKP-   71 (133)
Q Consensus         1 maPE~~~~--------~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   71 (133)
                      +|||+ +.        +..++.++|+||  +|++++++++|..|| .........           ......+....+. 
T Consensus       182 ~aPE~-~~~~~~~~~~~~~~~~~~Diws--lG~il~el~~g~~pf-~~~~~~~~~-----------~~~~~~~~~~~p~~  246 (319)
T 4euu_A          182 LHPDM-YERAVLRKDHQKKYGATVDLWS--IGVTFYHAATGSLPF-RPFEGPRRN-----------KEVMYKIITGKPSG  246 (319)
T ss_dssp             CCHHH-HHHHTSCCCCCCCBCTTHHHHH--HHHHHHHHHHSSCSE-ECTTCGGGC-----------HHHHHHHHHHCCTT
T ss_pred             cCHHH-hhhccccccccCCCCcHHHHHH--HHHHHHHHHhCCCCC-CCCCccchh-----------HHHHHHHhcCCCcc
Confidence            57887 43        567889999999  999999999999999 432221100           0022222222211 


Q ss_pred             -----------------Cc----chhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcc
Q psy9738          72 -----------------EI----KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF  109 (133)
Q Consensus        72 -----------------~~----~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~  109 (133)
                                       .+    ......+..+.+|+.+||..||.+|+|+.++++||-
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             cchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence                             00    112456678899999999999999999999998874

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.43  E-value=2.6e-14  Score=100.92  Aligned_cols=87  Identities=13%  Similarity=0.214  Sum_probs=66.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+.....+.+  +...
T Consensus       180 ~aPE~-~~~~~~~~~~Di~s--lG~il~ellt~g~~p~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  238 (287)
T 1u59_A          180 YAPEC-INFRKFSSRSDVWS--YGVTMWEALSYGQKPY-KKMKGPE---------------VMAFIEQGKRMEC--PPEC  238 (287)
T ss_dssp             CCHHH-HHHCEECHHHHHHH--HHHHHHHHHTTSCCTT-TTCCTHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cCHHH-hccCCCCchhhHHH--HHHHHHHHHcCCCCCc-ccCCHHH---------------HHHHHhcCCcCCC--CCCc
Confidence            57888 66677888999999  9999999998 99999 5433222               2233333333333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHP  108 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~  108 (133)
                      ++.+.+++.+||..||.+||++.+++++.
T Consensus       239 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          239 PPELYALMSDCWIYKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            89999999999999999999999998643

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.43  E-value=5.4e-14  Score=101.31  Aligned_cols=85  Identities=11%  Similarity=0.127  Sum_probs=65.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       186 ~aPE~-~~~~~~~~~~Di~s--lG~il~ellt~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  244 (327)
T 3poz_A          186 MALES-ILHRIYTHQSDVWS--YGVTVWELMTFGSKPY-DGIPASE---------------ISSILEKGERLPQ--PPIC  244 (327)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCTT-TTCCGGG---------------HHHHHHTTCCCCC--CTTB
T ss_pred             cChHH-hccCCCCchhhhhh--hHHHHHHHHhcCCCCc-cCCCHHH---------------HHHHHHcCCCCCC--CccC
Confidence            68898 77788999999999  9999999999 99999 5443322               2222222222222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|.+||++.++++
T Consensus       245 ~~~~~~li~~~l~~~p~~Rps~~ell~  271 (327)
T 3poz_A          245 TIDVYMIMVKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             CHHHHHHHHHHTCSCGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            889999999999999999999999874

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.43  E-value=5.7e-14  Score=99.89  Aligned_cols=92  Identities=13%  Similarity=0.264  Sum_probs=62.7

Q ss_pred             CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch--hhhhcHHHHH
Q psy9738           8 HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE--KEKLSQIFQD   85 (133)
Q Consensus         8 ~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   85 (133)
                      .+..|+.++|+||  +|+++++|++|..|| .+.+......            ............++.  ....+..+.+
T Consensus       171 ~~~~~~~~~Diws--lG~il~el~tg~~pf-~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (299)
T 3m2w_A          171 TGEKYDKSCDMWS--LGVIMYILLCGYPPF-YSNHGLAISP------------GMKTRIRMGQYEFPNPEWSEVSEEVKM  235 (299)
T ss_dssp             TTCGGGGHHHHHH--HHHHHHHHHHSSCSC-CC-------C------------CSCCSSCTTCCSSCHHHHTTSCHHHHH
T ss_pred             ccccCCchhhHHH--HHHHHHHHHHCCCCC-CCCcchhhhH------------HHHHHHhhccccCCchhcccCCHHHHH
Confidence            3456788999999  999999999999999 5433221000            000001111122211  1457899999


Q ss_pred             HHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          86 FLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        86 ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      |+.+||..||.+||++.++++||||+...
T Consensus       236 li~~~l~~dP~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          236 LIRNLLKTEPTQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred             HHHHHcccChhhCCCHHHHhcChhhcccc
Confidence            99999999999999999999999997543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.43  E-value=4e-14  Score=100.76  Aligned_cols=85  Identities=20%  Similarity=0.288  Sum_probs=65.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++ |..|| .+.....               ....+........  +...
T Consensus       219 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  277 (314)
T 2ivs_A          219 MAIES-LFDHIYTTQSDVWS--FGVLLWEIVTLGGNPY-PGIPPER---------------LFNLLKTGHRMER--PDNC  277 (314)
T ss_dssp             CCHHH-HHHCEECHHHHHHH--HHHHHHHHHTTSCCSS-TTCCGGG---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cChhh-hcCCCcCchhhHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHhhcCCcCCC--CccC
Confidence            57888 66677889999999  9999999999 99999 5443322               2222333322333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       278 ~~~~~~li~~~l~~dp~~Rps~~~l~~  304 (314)
T 2ivs_A          278 SEEMYRLMLQCWKQEPDKRPVFADISK  304 (314)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            899999999999999999999999875

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.42  E-value=4.8e-14  Score=101.23  Aligned_cols=102  Identities=11%  Similarity=0.122  Sum_probs=60.2

Q ss_pred             CCCccccCCC------CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC-CCCCc
Q psy9738           1 MAPEGGHHRK------QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN-KKPEI   73 (133)
Q Consensus         1 maPE~~~~~~------~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   73 (133)
                      ||||+ +.+.      .|+.++||||  +||++|||++|.+|+ .........+................+... ..+.+
T Consensus       179 mAPE~-l~~~~~~~~~~~~~k~DVwS--~Gvvl~El~tg~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~  254 (303)
T 3hmm_A          179 MAPEV-LDDSINMKHFESFKRADIYA--MGLVFWEIARRCSIG-GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI  254 (303)
T ss_dssp             CCHHH-HTTCSCTTCHHHHHHHHHHH--HHHHHHHHHHTBCBT-TBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCC
T ss_pred             cCHHH-hcccccccCCccChhHhhhh--HHHHHHHHHHCCCCC-CccccccccchhcccccchHHHHHHHHhcccCCCCC
Confidence            79999 5433      4677899999  999999999998877 332221111100000000000011111111 12333


Q ss_pred             chh---hhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          74 KEK---EKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        74 ~~~---~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..   ...+..+.+++.+||..||.+|||+.++++
T Consensus       255 p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          255 PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             CGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             CccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            221   123457789999999999999999999874

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.42  E-value=2.9e-14  Score=102.49  Aligned_cols=89  Identities=13%  Similarity=0.256  Sum_probs=67.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+.....+..  +...
T Consensus       212 ~aPE~-~~~~~~~~~~Di~s--lG~il~ellt~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  270 (327)
T 2yfx_A          212 MPPEA-FMEGIFTSKTDTWS--FGVLLWEIFSLGYMPY-PSKSNQE---------------VLEFVTSGGRMDP--PKNC  270 (327)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCSS-TTCCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             eCHhH-hcCCCCCchhhHHH--HHHHHHHHHcCCCCCC-CCcCHHH---------------HHHHHhcCCCCCC--CCCC
Confidence            58898 66778899999999  9999999998 88999 4332211               2222333332333  4467


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      +..+.+++.+||..||.+||++.+++++.+.
T Consensus       271 ~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          271 PGPVYRIMTQCWQHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            8899999999999999999999999987764

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.42  E-value=1.4e-13  Score=103.36  Aligned_cols=85  Identities=15%  Similarity=0.223  Sum_probs=66.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       353 ~aPE~-~~~~~~~~~sDvws--lG~~l~el~t~g~~P~-~~~~~~~---------------~~~~i~~~~~~~~--p~~~  411 (450)
T 1k9a_A          353 TAPEA-LREKKFSTKSDVWS--FGILLWEIYSFGRVPY-PRIPLKD---------------VVPRVEKGYKMDA--PDGC  411 (450)
T ss_dssp             SCHHH-HHSSCCCHHHHHHH--HHHHHHHHHTTTCCSS-TTSCTTT---------------HHHHHHTTCCCCC--CTTC
T ss_pred             eCHHH-hcCCCCCcHHHHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCcC
Confidence            68999 77788999999999  9999999998 99999 5544333               3333333332333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++.+.+++.+||..||.+|||+.++++
T Consensus       412 ~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          412 PPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            899999999999999999999999863

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.42  E-value=3.5e-14  Score=99.19  Aligned_cols=86  Identities=17%  Similarity=0.216  Sum_probs=64.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .......               ....+........  +...
T Consensus       172 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  230 (268)
T 3sxs_A          172 SAPEV-FHYFKYSSKSDVWA--FGILMWEVFSLGKMPY-DLYTNSE---------------VVLKVSQGHRLYR--PHLA  230 (268)
T ss_dssp             CCHHH-HHHSEEETTHHHHH--HHHHHHHHHTTTCCTT-TTSCHHH---------------HHHHHHTTCCCCC--CTTS
T ss_pred             CCHHH-HhccCCchhhhhHH--HHHHHHHHHcCCCCCc-cccChHH---------------HHHHHHcCCCCCC--CCcC
Confidence            58888 77778899999999  9999999998 99999 4332221               2222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      +..+.+++.+||..||.+|||+.+++++
T Consensus       231 ~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          231 SDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             hHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            8899999999999999999999999853

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.42  E-value=9.5e-14  Score=100.14  Aligned_cols=85  Identities=11%  Similarity=0.137  Sum_probs=65.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       186 ~aPE~-~~~~~~~~~~Di~s--lG~il~ell~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  244 (327)
T 3lzb_A          186 MALES-ILHRIYTHQSDVWS--YGVTVWELMTFGSKPY-DGIPASE---------------ISSILEKGERLPQ--PPIC  244 (327)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCTT-TTCCGGG---------------HHHHHHTTCCCCC--CTTB
T ss_pred             cCHHH-HcCCCCChHHHHHH--HHHHHHHHHHCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CccC
Confidence            58898 77778999999999  9999999999 99999 5443322               2222222222222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       245 ~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          245 TIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            889999999999999999999999864

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.42  E-value=8.9e-14  Score=99.21  Aligned_cols=85  Identities=13%  Similarity=0.173  Sum_probs=65.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++ |..|| .+.....               ....+.....+..  +...
T Consensus       216 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  274 (313)
T 3brb_A          216 IAIES-LADRVYTSKSDVWA--FGVTMWEIATRGMTPY-PGVQNHE---------------MYDYLLHGHRLKQ--PEDC  274 (313)
T ss_dssp             SCHHH-HHSSCCCHHHHHHH--HHHHHHHHHTTSCCSS-TTCCGGG---------------HHHHHHTTCCCCC--BTTC
T ss_pred             cCchh-hcCCCccchhhhHH--HHHHHHHHHhcCCCCC-ccCCHHH---------------HHHHHHcCCCCCC--Cccc
Confidence            57888 77778899999999  9999999999 88888 5443332               2333333333333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       275 ~~~l~~li~~~l~~dp~~Rps~~~l~~  301 (313)
T 3brb_A          275 LDELYEIMYSCWRTDPLDRPTFSVLRL  301 (313)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            899999999999999999999999874

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.41  E-value=1.3e-13  Score=97.40  Aligned_cols=92  Identities=9%  Similarity=0.047  Sum_probs=62.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .+..........        ..............+  ....+
T Consensus       182 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~~~~~~--------~~~~~~~~~~~~~~~--~~~~~  247 (296)
T 3uzp_A          182 ASINT-HLGIEQSRRDDLES--LGYVLMYFNLGSLPW-QGLKAATKRQKY--------ERISEKKMSTPIEVL--CKGYP  247 (296)
T ss_dssp             CCHHH-HTTCCCCHHHHHHH--HHHHHHHHHHSSCTT-SSCCCSSSSSHH--------HHHHHHHHHSCHHHH--TTTSC
T ss_pred             CChhh-hcCCCCCcchhhHH--HHHHHHHHHhCCCCC-CCcCchhhhhhh--------hhhcccccCCchHHH--HhhCC
Confidence            58899 77778899999999  999999999999999 543322110000        000111111110011  24568


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +.+.+++.+||..||.+||++.++++
T Consensus       248 ~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          248 SEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence            89999999999999999999999863

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.41  E-value=1.3e-13  Score=97.24  Aligned_cols=90  Identities=12%  Similarity=0.102  Sum_probs=62.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCc-chhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEI-KEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~   78 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .+........            ....+.... .... .....
T Consensus       182 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~  245 (296)
T 4hgt_A          182 ASINT-HLGIEQSRRDDLES--LGYVLMYFNLGSLPW-QGLKAATKRQ------------KYERISEKKMSTPIEVLCKG  245 (296)
T ss_dssp             CCHHH-HTTCCCCHHHHHHH--HHHHHHHHHHSSCTT-SSCCCSSSSS------------HHHHHHHHHHHSCHHHHTTT
T ss_pred             cchHH-hcCCCCCchhHHHH--HHHHHHHHhcCCCCC-cccchhhhhh------------hhhhhhcccccchhhhhhcc
Confidence            58898 77778999999999  999999999999999 5433222111            111111100 0010 00134


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++..+.+++.+||..||.+||+++++++
T Consensus       246 ~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          246 YPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             SCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             CCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            6889999999999999999999999864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.41  E-value=5.8e-14  Score=101.83  Aligned_cols=86  Identities=15%  Similarity=0.219  Sum_probs=65.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHH-HHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQAL-YLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   78 (133)
                      ||||+ +.+..|+.++||||  +|+++++|++ |..|| .+.....               .. ..+........  +..
T Consensus       262 ~aPE~-~~~~~~~~~~Di~s--lG~il~ellt~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~--~~~  320 (359)
T 3vhe_A          262 MAPET-IFDRVYTIQSDVWS--FGVLLWEIFSLGASPY-PGVKIDE---------------EFCRRLKEGTRMRA--PDY  320 (359)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHTTTSCCSS-TTCCCSH---------------HHHHHHHHTCCCCC--CTT
T ss_pred             EChhh-hcCCCCCchhhhhh--HHHHHHHHHhcCCCCC-CccchhH---------------HHHHHHHcCCCCCC--CCC
Confidence            68998 77788999999999  9999999998 99999 5443322               12 22222222333  456


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      .++.+.+++.+||..||.+||++.++++|
T Consensus       321 ~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          321 TTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            78899999999999999999999999864

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.41  E-value=6.2e-14  Score=97.70  Aligned_cols=85  Identities=20%  Similarity=0.257  Sum_probs=63.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .......               ....+........  +...
T Consensus       172 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~~g~~p~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  230 (267)
T 3t9t_A          172 ASPEV-FSFSRYSSKSDVWS--FGVLMWEVFSEGKIPY-ENRSNSE---------------VVEDISTGFRLYK--PRLA  230 (267)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCTT-TTCCHHH---------------HHHHHHTTCCCCC--CTTS
T ss_pred             cChhh-hcCCCccchhchhh--hHHHHHHHhccCCCCC-CCCCHHH---------------HHHHHhcCCcCCC--CccC
Confidence            58888 66777889999999  9999999999 89999 4432211               2223333222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       231 ~~~l~~li~~~l~~~p~~Rps~~~ll~  257 (267)
T 3t9t_A          231 STHVYQIMNHCWRERPEDRPAFSRLLR  257 (267)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            889999999999999999999999874

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.40  E-value=2e-13  Score=97.56  Aligned_cols=87  Identities=17%  Similarity=0.352  Sum_probs=65.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++|+||  +|++++++++|..|| .......             ............+..  +...+
T Consensus       170 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~~g~~p~-~~~~~~~-------------~~~~~~~~~~~~~~~--~~~~~  230 (307)
T 2eva_A          170 MAPEV-FEGSNYSEKCDVFS--WGIILWEVITRRKPF-DEIGGPA-------------FRIMWAVHNGTRPPL--IKNLP  230 (307)
T ss_dssp             SCHHH-HTCCCCCTHHHHHH--HHHHHHHHHHTCCTT-TTTCSSH-------------HHHHHHHHTTCCCCC--BTTCC
T ss_pred             EChhh-hCCCCCCcHHHHHH--HHHHHHHHHHCCCCc-hhhCccH-------------HHHHHHHhcCCCCCc--ccccC
Confidence            68999 77888999999999  999999999999999 4322111             001122222333333  34678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+.+++.+||..||.+|||+.++++
T Consensus       231 ~~l~~li~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          231 KPIESLMTRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            89999999999999999999999874

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.40  E-value=6.2e-14  Score=98.65  Aligned_cols=86  Identities=15%  Similarity=0.192  Sum_probs=64.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .......               ....+........  +...
T Consensus       188 ~aPE~-~~~~~~~~~~Dv~s--lG~~l~~l~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  246 (283)
T 3gen_A          188 SPPEV-LMYSKFSSKSDIWA--FGVLMWEIYSLGKMPY-ERFTNSE---------------TAEHIAQGLRLYR--PHLA  246 (283)
T ss_dssp             CCHHH-HHHCCCSHHHHHHH--HHHHHHHHHTTTCCTT-TTSCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             CCHHH-hccCCCCchhhHHH--HHHHHHHHHhCCCCCc-cccChhH---------------HHHHHhcccCCCC--CCcC
Confidence            58898 76778899999999  9999999998 99999 4433221               2222332222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      +..+.+++.+||..+|.+||++.++++|
T Consensus       247 ~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          247 SEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            8899999999999999999999998854

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.40  E-value=1.3e-13  Score=95.99  Aligned_cols=85  Identities=15%  Similarity=0.330  Sum_probs=62.4

Q ss_pred             CCCccccCCCCCCC---ccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC-CCCCcchh
Q psy9738           1 MAPEGGHHRKQYGP---KVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN-KKPEIKEK   76 (133)
Q Consensus         1 maPE~~~~~~~~~~---~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   76 (133)
                      ||||+ +.+..++.   ++|+||  +|++++++++|..|| .+.+...               ....+... ..+.+  +
T Consensus       175 ~aPE~-~~~~~~~~~~~~~Di~s--lG~il~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~--~  233 (271)
T 3kmu_A          175 VAPEA-LQKKPEDTNRRSADMWS--FAVLLWELVTREVPF-ADLSNME---------------IGMKVALEGLRPTI--P  233 (271)
T ss_dssp             SCHHH-HHSCGGGSCHHHHHHHH--HHHHHHHHHHCSCTT-TTSCHHH---------------HHHHHHHSCCCCCC--C
T ss_pred             cChhh-hccCCCCCCCchhhHHH--HHHHHHHHHhCCCCc-cccChHH---------------HHHHHHhcCCCCCC--C
Confidence            68998 65554444   799999  999999999999999 5433221               22222222 22333  4


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ...+..+.+++.+||..||.+|||+.++++
T Consensus       234 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          234 PGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            567899999999999999999999999874

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.40  E-value=7.2e-14  Score=100.67  Aligned_cols=85  Identities=13%  Similarity=0.262  Sum_probs=65.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++ |..|| .+.....               ....+........  +...
T Consensus       243 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  301 (343)
T 1luf_A          243 MPPES-IFYNRYTTESDVWA--YGVVLWEIFSYGLQPY-YGMAHEE---------------VIYYVRDGNILAC--PENC  301 (343)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTTCCTT-TTSCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cChhh-hccCCcCcccccHH--HHHHHHHHHhcCCCcC-CCCChHH---------------HHHHHhCCCcCCC--CCCC
Confidence            58998 66778999999999  9999999998 99999 5433221               2233333333333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       302 ~~~l~~li~~~l~~~p~~Rps~~~~~~  328 (343)
T 1luf_A          302 PLELYNLMRLCWSKLPADRPSFCSIHR  328 (343)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            889999999999999999999999874

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.40  E-value=8.1e-14  Score=102.45  Aligned_cols=85  Identities=13%  Similarity=0.229  Sum_probs=65.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++||||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       260 ~aPE~-~~~~~~~~~~Diws--lG~il~ellt~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  318 (382)
T 3tt0_A          260 MAPEA-LFDRIYTHQSDVWS--FGVLLWEIFTLGGSPY-PGVPVEE---------------LFKLLKEGHRMDK--PSNC  318 (382)
T ss_dssp             SCHHH-HHSCCCCHHHHHHH--HHHHHHHHHTTSCCSS-TTCCHHH---------------HHHHHHTTCCCCC--CSSC
T ss_pred             eCHHH-hcCCCCCchhHHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CccC
Confidence            58998 77788899999999  9999999998 99999 4432211               2222333322333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+|+.+||..||.+||++.++++
T Consensus       319 ~~~l~~li~~~l~~dP~~Rps~~ell~  345 (382)
T 3tt0_A          319 TNELYMMMRDCWHAVPSQRPTFKQLVE  345 (382)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            899999999999999999999999875

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.39  E-value=2.5e-13  Score=95.70  Aligned_cols=87  Identities=21%  Similarity=0.382  Sum_probs=63.2

Q ss_pred             CCCcccc--CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh-CCCCCcchhh
Q psy9738           1 MAPEGGH--HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKE   77 (133)
Q Consensus         1 maPE~~~--~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   77 (133)
                      +|||+ +  ....++.++|+||  +|++++++++|..|| ........            . ....+.. ...+.+  +.
T Consensus       193 ~aPE~-~~~~~~~~~~~~Di~s--lG~~l~~l~~g~~pf-~~~~~~~~------------~-~~~~~~~~~~~~~~--~~  253 (287)
T 4f0f_A          193 MAPET-IGAEEESYTEKADTYS--FAMILYTILTGEGPF-DEYSYGKI------------K-FINMIREEGLRPTI--PE  253 (287)
T ss_dssp             SCGGG-SSCSSCEECHHHHHHH--HHHHHHHHHHSSCTT-TTCCCCHH------------H-HHHHHHHSCCCCCC--CT
T ss_pred             cCchh-hccCCCCcCchhhHHH--HHHHHHHHHcCCCCC-ccccccHH------------H-HHHHHhccCCCCCC--Cc
Confidence            58999 6  3455788999999  999999999999999 44332220            0 1111222 222333  45


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..++.+.+++.+||..||.+||++.++++
T Consensus       254 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          254 DCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            67899999999999999999999999874

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.39  E-value=5.8e-14  Score=100.92  Aligned_cols=85  Identities=16%  Similarity=0.199  Sum_probs=64.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++ |..|| .+.....               ....+........  +...
T Consensus       208 ~aPE~-~~~~~~~~~~Di~s--lG~il~ellt~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  266 (327)
T 1fvr_A          208 MAIES-LNYSVYTTNSDVWS--YGVLLWEIVSLGGTPY-CGMTCAE---------------LYEKLPQGYRLEK--PLNC  266 (327)
T ss_dssp             CCHHH-HHHCEECHHHHHHH--HHHHHHHHHTTSCCTT-TTCCHHH---------------HHHHGGGTCCCCC--CTTB
T ss_pred             cChhh-hccccCCchhcchH--HHHHHHHHHcCCCCCC-CCCcHHH---------------HHHHhhcCCCCCC--CCCC
Confidence            57888 66677889999999  9999999998 99999 5433211               2222332222222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       267 ~~~l~~li~~~l~~dp~~Rps~~ell~  293 (327)
T 1fvr_A          267 DDEVYDLMRQCWREKPYERPSFAQILV  293 (327)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            899999999999999999999999875

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.39  E-value=1.5e-13  Score=96.46  Aligned_cols=85  Identities=14%  Similarity=0.205  Sum_probs=64.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .......               ....+.....+..  +...
T Consensus       181 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  239 (278)
T 1byg_A          181 TAPEA-LREKKFSTKSDVWS--FGILLWEIYSFGRVPY-PRIPLKD---------------VVPRVEKGYKMDA--PDGC  239 (278)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCSC-TTSCGGG---------------HHHHHTTTCCCCC--CTTC
T ss_pred             cCHHH-hCCCCCCchhcHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHhcCCCCCC--cccC
Confidence            58898 76778899999999  9999999998 99999 4433222               2223332222333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++.+.+++.+||..||.+||++.++++
T Consensus       240 ~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          240 PPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            899999999999999999999999864

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.39  E-value=1.8e-13  Score=100.65  Aligned_cols=85  Identities=18%  Similarity=0.288  Sum_probs=64.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|++++++++ |.+|| .+.+...               ....+........  +...
T Consensus       263 ~aPE~-~~~~~~~~~~DvwS--lG~il~ellt~~~~p~-~~~~~~~---------------~~~~~~~~~~~~~--p~~~  321 (373)
T 3c1x_A          263 MALES-LQTQKFTTKSDVWS--FGVLLWELMTRGAPPY-PDVNTFD---------------ITVYLLQGRRLLQ--PEYC  321 (373)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCSC-TTSCSSC---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cChHH-hcCCCCCcHHHHHH--HHHHHHHHHhCcCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            68898 77778899999999  9999999999 67777 5444333               3333333332222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       322 ~~~l~~li~~cl~~dp~~RPs~~ell~  348 (373)
T 3c1x_A          322 PDPLYEVMLKCWHPKAEMRPSFSELVS  348 (373)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            889999999999999999999999864

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.39  E-value=5.3e-14  Score=101.21  Aligned_cols=86  Identities=13%  Similarity=0.135  Sum_probs=64.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       184 ~aPE~-~~~~~~~~~~Di~s--lG~~l~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  242 (325)
T 3kex_A          184 MALES-IHFGKYTHQSDVWS--YGVTVWELMTFGAEPY-AGLRLAE---------------VPDLLEKGERLAQ--PQIC  242 (325)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCTT-TTSCTTH---------------HHHHHHTTCBCCC--CTTB
T ss_pred             cChHH-hccCCCChhhHhHH--hHHHHHHHHhCCCCCc-cccCHHH---------------HHHHHHcCCCCCC--CCcC
Confidence            58888 77778899999999  9999999999 99999 5443322               2222222222222  3456


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      +..+.+++.+||..||.+||++.+++++
T Consensus       243 ~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          243 TIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             CTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             cHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            7788999999999999999999998753

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.39  E-value=8.8e-14  Score=99.51  Aligned_cols=86  Identities=10%  Similarity=0.212  Sum_probs=64.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       207 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  265 (322)
T 1p4o_A          207 MSPES-LKDGVFTTYSDVWS--FGVVLWEIATLAEQPY-QGLSNEQ---------------VLRFVMEGGLLDK--PDNC  265 (322)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHHTSCCTT-TTSCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cChhh-hccCCCCchhhHHH--HHHHHHHHHhcCCCcc-ccCCHHH---------------HHHHHHcCCcCCC--CCCC
Confidence            58898 76777899999999  9999999999 88888 4432211               2222333322333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      +..+.+++.+||..||.+||++.+++++
T Consensus       266 ~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          266 PDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            8899999999999999999999998754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.39  E-value=1.3e-13  Score=99.60  Aligned_cols=87  Identities=17%  Similarity=0.167  Sum_probs=65.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   78 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++ |..|| .+.....               ......... .+..  +..
T Consensus       241 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~--~~~  299 (344)
T 1rjb_A          241 MAPES-LFEGIYTIKSDVWS--YGILLWEIFSLGVNPY-PGIPVDA---------------NFYKLIQNGFKMDQ--PFY  299 (344)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHTTTSCCSS-TTCCCSH---------------HHHHHHHTTCCCCC--CTT
T ss_pred             cCHHH-hccCCCChhHhHHH--HHHHHHHHHcCCCCCc-ccCCcHH---------------HHHHHHhcCCCCCC--CCC
Confidence            68998 76778899999999  9999999998 99999 5443322               222222222 2222  455


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHP  108 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~  108 (133)
                      .+..+.+++.+||..||.+||++.++++|-
T Consensus       300 ~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          300 ATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            789999999999999999999999998643

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.39  E-value=6.6e-14  Score=102.83  Aligned_cols=85  Identities=16%  Similarity=0.245  Sum_probs=64.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       282 ~aPE~-~~~~~~~~~~Dvws--lG~il~el~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  340 (377)
T 3cbl_A          282 TAPEA-LNYGRYSSESDVWS--FGILLWETFSLGASPY-PNLSNQQ---------------TREFVEKGGRLPC--PELC  340 (377)
T ss_dssp             SCHHH-HHHCEEEHHHHHHH--HHHHHHHHHTTSCCSS-TTSCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             CCHhH-hccCCCCchhhHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            68998 77778899999999  9999999998 99999 4432211               2222222222222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+|||+.++++
T Consensus       341 ~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          341 PDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            889999999999999999999999863

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.39  E-value=8.2e-14  Score=100.41  Aligned_cols=85  Identities=13%  Similarity=0.300  Sum_probs=64.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++||||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       221 ~aPE~-~~~~~~~~~~Di~s--lG~il~ell~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  279 (325)
T 3kul_A          221 TAPEA-IAFRTFSSASDVWS--FGVVMWEVLAYGERPY-WNMTNRD---------------VISSVEEGYRLPA--PMGC  279 (325)
T ss_dssp             SCHHH-HHHCEECHHHHHHH--HHHHHHHHHTTSCCTT-TTSCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cCHhH-hcCCCCCcHHHHHH--HHHHHHHHHcCCCCCc-ccCCHHH---------------HHHHHHcCCCCCC--CCCc
Confidence            58898 77778899999999  9999999998 99999 5433222               2233333322222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       280 ~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          280 PHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            899999999999999999999999874

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.38  E-value=2.2e-13  Score=95.95  Aligned_cols=85  Identities=14%  Similarity=0.205  Sum_probs=64.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .+.+...               ....+........  +...
T Consensus       179 ~aPE~-~~~~~~~~~~Di~s--lG~il~~ll~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  237 (288)
T 3kfa_A          179 TAPES-LAYNKFSIKSDVWA--FGVLLWEIATYGMSPY-PGIDLSQ---------------VYELLEKDYRMER--PEGC  237 (288)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCSS-TTCCGGG---------------HHHHHHTTCCCCC--CTTC
T ss_pred             CChhh-hccCCCCchhhHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHhccCCCCC--CCCC
Confidence            58888 76778899999999  9999999999 88999 5433222               2222222222222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++.+.+++.+||..||.+||++.++++
T Consensus       238 ~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          238 PEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence            899999999999999999999999864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.38  E-value=7.8e-14  Score=98.65  Aligned_cols=85  Identities=13%  Similarity=0.225  Sum_probs=64.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+.....+..  +...
T Consensus       187 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  245 (291)
T 1xbb_A          187 YAPEC-INYYKFSSKSDVWS--FGVLMWEAFSYGQKPY-RGMKGSE---------------VTAMLEKGERMGC--PAGC  245 (291)
T ss_dssp             CCHHH-HHHCEEEHHHHHHH--HHHHHHHHHTTTCCSS-TTCCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             eChHH-hccCCCChhhhHHH--HHHHHHHHHhcCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            57888 66667888999999  9999999998 99999 5433211               2222333333333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       246 ~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          246 PREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            899999999999999999999999863

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.38  E-value=1.2e-13  Score=103.71  Aligned_cols=84  Identities=12%  Similarity=0.220  Sum_probs=64.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +....++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       352 ~aPE~-~~~~~~~~~~Dvws--lG~~l~el~t~g~~P~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  410 (454)
T 1qcf_A          352 TAPEA-INFGSFTIKSDVWS--FGILLMEIVTYGRIPY-PGMSNPE---------------VIRALERGYRMPR--PENC  410 (454)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCSS-TTCCHHH---------------HHHHHHHTCCCCC--CTTS
T ss_pred             cCHHH-hccCCCCcHHHHHh--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            68999 77778999999999  9999999998 99999 5433221               2222333222222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +..+.+++.+||..||.+|||+.+++
T Consensus       411 ~~~l~~li~~cl~~dp~~RPt~~~i~  436 (454)
T 1qcf_A          411 PEELYNIMMRCWKNRPEERPTFEYIQ  436 (454)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHH
Confidence            89999999999999999999999986

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.38  E-value=1.7e-13  Score=97.65  Aligned_cols=87  Identities=15%  Similarity=0.201  Sum_probs=65.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .+.....              .....+........  +...
T Consensus       217 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~t~g~~p~-~~~~~~~--------------~~~~~~~~~~~~~~--~~~~  276 (316)
T 2xir_A          217 MAPET-IFDRVYTIQSDVWS--FGVLLWEIFSLGASPY-PGVKIDE--------------EFCRRLKEGTRMRA--PDYT  276 (316)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCSS-TTCCCSH--------------HHHHHHHHTCCCCC--CTTC
T ss_pred             cCchh-hccccccchhHHHH--HHHHHHHHHhCCCCCC-cccchhH--------------HHHHHhccCccCCC--CCCC
Confidence            58898 66778899999999  9999999998 99999 5433222              01122222222333  3457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      ++.+.+++.+||..||.+||++.++++|
T Consensus       277 ~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          277 TPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            8899999999999999999999999864

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.37  E-value=1.7e-13  Score=96.80  Aligned_cols=90  Identities=10%  Similarity=0.149  Sum_probs=63.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcc-hhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIK-EKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~   78 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++|..|| .+.......            .....+.... ..... ....
T Consensus       185 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~~g~~pf-~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~  248 (298)
T 1csn_A          185 MSINT-HLGREQSRRDDLEA--LGHVFMYFLRGSLPW-QGLKAATNK------------QKYERIGEKKQSTPLRELCAG  248 (298)
T ss_dssp             CCHHH-HTTCCCCHHHHHHH--HHHHHHHHHHSSCTT-SSCCSCCHH------------HHHHHHHHHHHHSCHHHHTTT
T ss_pred             CCchh-hcCCCCChHHHHHH--HHHHHHHHHcCCCCc-chhhccccH------------HHHHHHHhhccCccHHHHHhh
Confidence            58998 77788899999999  999999999999999 554332200            0111111100 01110 0235


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++..+.+++.+||..||.+||++.++++
T Consensus       249 ~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          249 FPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             SCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             CcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence            6889999999999999999999999863

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.37  E-value=4.4e-13  Score=94.89  Aligned_cols=85  Identities=18%  Similarity=0.288  Sum_probs=63.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |.+|| .+.+...               ....+........  +...
T Consensus       199 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~~~~~~~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  257 (298)
T 3f66_A          199 MALES-LQTQKFTTKSDVWS--FGVLLWELMTRGAPPY-PDVNTFD---------------ITVYLLQGRRLLQ--PEYC  257 (298)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCSS-TTSCTTT---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cChHH-hcCCCCChHHHHHH--HHHHHHHHHhCCCCCC-ccCCHHH---------------HHHHHhcCCCCCC--CccC
Confidence            57888 66778899999999  9999999999 55666 4444333               3333333332222  3457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       258 ~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          258 PDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            889999999999999999999999874

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.37  E-value=2e-13  Score=97.07  Aligned_cols=85  Identities=14%  Similarity=0.226  Sum_probs=63.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   78 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++ |..|| .+.....               ......... ....  +..
T Consensus       214 ~aPE~-~~~~~~~~~~Di~s--lG~il~ellt~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~--~~~  272 (313)
T 1t46_A          214 MAPES-IFNCVYTFESDVWS--YGIFLWELFSLGSSPY-PGMPVDS---------------KFYKMIKEGFRMLS--PEH  272 (313)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTTCCSS-TTCCSSH---------------HHHHHHHHTCCCCC--CTT
T ss_pred             eChHH-hcCCCCChHHHHHH--HHHHHHHHHhCCCCCC-Ccccchh---------------HHHHHhccCCCCCC--ccc
Confidence            58898 66778899999999  9999999998 99999 5433222               222222211 1221  345


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      .+..+.+++.+||..||.+||++.++++
T Consensus       273 ~~~~l~~li~~~l~~dp~~Rps~~ell~  300 (313)
T 1t46_A          273 APAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (313)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            7889999999999999999999999874

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.36  E-value=5.8e-13  Score=94.08  Aligned_cols=86  Identities=14%  Similarity=0.256  Sum_probs=62.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||. +.+..++.++|+||  +|+++++|++|..|+....+...               ....+........  +...+
T Consensus       195 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~~~~~~~~~~~---------------~~~~~~~~~~~~~--~~~~~  254 (298)
T 3pls_A          195 TALES-LQTYRFTTKSDVWS--FGVLLWELLTRGAPPYRHIDPFD---------------LTHFLAQGRRLPQ--PEYCP  254 (298)
T ss_dssp             SCHHH-HTTCCCCHHHHHHH--HHHHHHHHHHTSCCTTTTSCGGG---------------HHHHHHTTCCCCC--CTTCC
T ss_pred             cChhh-hccCCCChhhchhh--HHHHHHHHhhCCCCCCccCCHHH---------------HHHHhhcCCCCCC--Cccch
Confidence            57888 77778899999999  99999999996555413322222               2222333332322  45678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+.+++.+||..||.+|||+.++++
T Consensus       255 ~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          255 DSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHH
Confidence            89999999999999999999999863

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.36  E-value=2e-13  Score=102.52  Aligned_cols=90  Identities=16%  Similarity=0.234  Sum_probs=67.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +....++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       348 ~aPE~-~~~~~~~~~sDvws--lG~~l~el~t~g~~P~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  406 (452)
T 1fmk_A          348 TAPEA-ALYGRFTIKSDVWS--FGILLTELTTKGRVPY-PGMVNRE---------------VLDQVERGYRMPC--PPEC  406 (452)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTTCCSS-TTCCHHH---------------HHHHHHTTCCCCC--CTTS
T ss_pred             cCHhH-HhcCCCCccccHHh--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            68998 76778999999999  9999999999 89999 5433221               2222332222222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc--Ccccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK--HPFLK  111 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~--h~~~~  111 (133)
                      +..+.+++.+||..||.+|||++++++  ..++.
T Consensus       407 ~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          407 PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence            889999999999999999999999874  34443

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.36  E-value=1.5e-13  Score=107.91  Aligned_cols=102  Identities=15%  Similarity=0.140  Sum_probs=63.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHh----hh-----CC--
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLI----AT-----NK--   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~--   69 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .+..... .+.  . .+ .........    ..     ..  
T Consensus       190 ~APE~-l~~~~~s~ksDIwS--LGviLyeLltG~~Pf-~~~~~~~-~~~--~-~i-~~~~~~~~~~~~~l~g~~~~~~~l  260 (676)
T 3qa8_A          190 LAPEL-LEQKKYTVTVDYWS--FGTLAFECITGFRPF-LPNWQPV-QWH--G-KV-REKSNEHIVVYDDLTGAVKFSSVL  260 (676)
T ss_dssp             CSSCS-SCCSCCSTTHHHHH--HHHHHHHHHSSCSSC-CSSCHHH-HSS--T-TC-C------CCSCCCCSSSCCCCSSS
T ss_pred             CChHH-hccCCCCchhHHHH--HHHHHHHHHHCCCCC-Ccccchh-hhh--h-hh-hcccchhhhhhhhhcccccccccc
Confidence            58999 78888999999999  999999999999999 4321000 000  0 00 000000000    00     00  


Q ss_pred             CCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          70 KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        70 ~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      +..-.....++..+.+|+.+||..||.+|||+.++++||||+
T Consensus       261 p~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~  302 (676)
T 3qa8_A          261 PTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQ  302 (676)
T ss_dssp             CCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHH
T ss_pred             CCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHH
Confidence            000001234678899999999999999999999999999986

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.35  E-value=4.7e-13  Score=95.59  Aligned_cols=86  Identities=14%  Similarity=0.240  Sum_probs=59.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCC-Ccchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKP-EIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .+....                ..........+ ....+..+
T Consensus       202 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~  261 (309)
T 2h34_A          202 MAPER-FSESHATYRADIYA--LTCVLYECLTGSPPY-QGDQLS----------------VMGAHINQAIPRPSTVRPGI  261 (309)
T ss_dssp             CCGGG-TCC----CCCHHHH--HHHHHHHHHHSSCSS-CSCHHH----------------HHHHHHHSCCCCGGGTSTTC
T ss_pred             cCHHH-HcCCCCCchHhHHH--HHHHHHHHHHCCCCC-CCchHH----------------HHHHHhccCCCCccccCCCC
Confidence            58999 77788899999999  999999999999999 432211                12222222221 11123457


Q ss_pred             cHHHHHHHHHHhhhcccccC-CHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRA-SASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~-s~~ell~  106 (133)
                      +..+.+++.+||..||.+|| ++++++.
T Consensus       262 ~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          262 PVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             CTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             CHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence            88999999999999999999 8888763

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.35  E-value=2.5e-13  Score=98.14  Aligned_cols=85  Identities=14%  Similarity=0.297  Sum_probs=64.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       217 ~aPE~-~~~~~~~~~~Di~s--lG~il~ellt~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  275 (333)
T 1mqb_A          217 TAPEA-ISYRKFTSASDVWS--FGIVMWEVMTYGERPY-WELSNHE---------------VMKAINDGFRLPT--PMDC  275 (333)
T ss_dssp             SCHHH-HHSCCCCHHHHHHH--HHHHHHHHHTTSCCTT-TTCCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cCchh-cccCCCCchhhhHH--HHHHHHHHHcCCCCCc-ccCCHHH---------------HHHHHHCCCcCCC--cccC
Confidence            58898 77778899999999  9999999998 99999 4432211               2222332222222  4467


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..+|.+||++.++++
T Consensus       276 ~~~l~~li~~~l~~~p~~Rps~~~l~~  302 (333)
T 1mqb_A          276 PSAIYQLMMQCWQQERARRPKFADIVS  302 (333)
T ss_dssp             BHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            889999999999999999999999864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.35  E-value=1.5e-13  Score=99.13  Aligned_cols=85  Identities=13%  Similarity=0.226  Sum_probs=63.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       226 ~aPE~-~~~~~~~~~~Di~s--lG~il~ellt~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  284 (334)
T 2pvf_A          226 MAPEA-LFDRVYTHQSDVWS--FGVLMWEIFTLGGSPY-PGIPVEE---------------LFKLLKEGHRMDK--PANC  284 (334)
T ss_dssp             CCHHH-HHHCEECHHHHHHH--HHHHHHHHHTTSCCSS-TTCCHHH---------------HHHHHHHTCCCCC--CTTC
T ss_pred             eChHH-hcCCCcChHHHHHH--HHHHHHHHHhCCCCCc-CcCCHHH---------------HHHHHhcCCCCCC--CccC
Confidence            58888 66677889999999  9999999998 99999 4432111               2222222322333  4467


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       285 ~~~l~~li~~~l~~dp~~Rps~~ell~  311 (334)
T 2pvf_A          285 TNELYMMMRDCWHAVPSQRPTFKQLVE  311 (334)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            889999999999999999999999874

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.35  E-value=3e-13  Score=102.73  Aligned_cols=85  Identities=14%  Similarity=0.205  Sum_probs=65.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +....|+.++||||  +|+++++|++ |..|| .+.+...               ....+........  +...
T Consensus       386 ~aPE~-~~~~~~~~~sDvwS--lG~~l~el~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  444 (495)
T 1opk_A          386 TAPES-LAYNKFSIKSDVWA--FGVLLWEIATYGMSPY-PGIDLSQ---------------VYELLEKDYRMER--PEGC  444 (495)
T ss_dssp             CCHHH-HHHCEECHHHHHHH--HHHHHHHHHTTSCCSS-TTCCGGG---------------HHHHHHTTCCCCC--CTTC
T ss_pred             eCHhH-HhcCCCCcHHhHHh--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            68998 77778899999999  9999999998 89999 5443222               2222222222222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       445 ~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          445 PEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            899999999999999999999999874

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.35  E-value=1.7e-13  Score=96.52  Aligned_cols=86  Identities=19%  Similarity=0.254  Sum_probs=64.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .+.+...               ....+.... .....+...
T Consensus       191 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~~g~~p~-~~~~~~~---------------~~~~~~~~~-~~~~~~~~~  250 (291)
T 1u46_A          191 CAPES-LKTRTFSHASDTWM--FGVTLWEMFTYGQEPW-IGLNGSQ---------------ILHKIDKEG-ERLPRPEDC  250 (291)
T ss_dssp             CCHHH-HHHCEEEHHHHHHH--HHHHHHHHHTTSCCTT-TTCCHHH---------------HHHHHHTSC-CCCCCCTTC
T ss_pred             eCchh-hcCCCCCchhhHHH--HHHHHHHHHhCCCCCc-ccCCHHH---------------HHHHHHccC-CCCCCCcCc
Confidence            57888 66677888999999  9999999999 99999 5433221               222232222 222224567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       251 ~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          251 PQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            899999999999999999999999875

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.34  E-value=2.2e-13  Score=95.62  Aligned_cols=85  Identities=13%  Similarity=0.201  Sum_probs=63.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++ |..|| .+.....               ....+........  +...
T Consensus       177 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~--~~~~  235 (279)
T 1qpc_A          177 TAPEA-INYGTFTIKSDVWS--FGILLTEIVTHGRIPY-PGMTNPE---------------VIQNLERGYRMVR--PDNC  235 (279)
T ss_dssp             SCHHH-HHHCEECHHHHHHH--HHHHHHHHHTTTCCSS-TTCCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cChhh-hccCCCCchhhhHH--HHHHHHHHHhCCCCCC-cccCHHH---------------HHHHHhcccCCCC--cccc
Confidence            57888 66677888999999  9999999998 89999 4432211               2222222222222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       236 ~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          236 PEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            899999999999999999999999864

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.34  E-value=3.3e-13  Score=105.00  Aligned_cols=84  Identities=13%  Similarity=0.223  Sum_probs=65.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +....|+.++||||  +|+++++|++ |..|| .+.....               ....+........  +...
T Consensus       506 ~APE~-~~~~~~~~~sDvwS--lGv~l~ellt~G~~Pf-~~~~~~~---------------~~~~i~~~~~~~~--p~~~  564 (613)
T 2ozo_A          506 YAPEC-INFRKFSSRSDVWS--YGVTMWEALSYGQKPY-KKMKGPE---------------VMAFIEQGKRMEC--PPEC  564 (613)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCTT-TTCCSHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             eCHhh-hcCCCCCcHHHHHH--HHHHHHHHHHCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCcC
Confidence            68999 77788999999999  9999999997 99999 5443322               3333333333333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      ++.+.+++.+||..+|.+||++.+++
T Consensus       565 ~~~l~~li~~cl~~dP~~RPs~~~l~  590 (613)
T 2ozo_A          565 PPELYALMSDCWIYKWEDRPDFLTVE  590 (613)
T ss_dssp             CHHHHHHHHHTTCSSTTTSCCHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            89999999999999999999999975

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.34  E-value=3.7e-13  Score=96.44  Aligned_cols=84  Identities=15%  Similarity=0.168  Sum_probs=53.9

Q ss_pred             CCCcccc---CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhh
Q psy9738           1 MAPEGGH---HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKE   77 (133)
Q Consensus         1 maPE~~~---~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (133)
                      +|||+ +   ....++.++|+||  +|++++++++|..|| .......               .....     .......
T Consensus       217 ~aPE~-~~~~~~~~~~~~~Dv~s--lG~il~el~~g~~p~-~~~~~~~---------------~~~~~-----~~~~~~~  272 (337)
T 3ll6_A          217 RTPEI-IDLYSNFPIGEKQDIWA--LGCILYLLCFRQHPF-EDGAKLR---------------IVNGK-----YSIPPHD  272 (337)
T ss_dssp             --------CCTTSCSSHHHHHHH--HHHHHHHHHHSSCCC---------------------------------CCCCTTC
T ss_pred             CChhh-hhccccCCCChHHhHHH--HHHHHHHHHhCCCCC-cchhHHH---------------hhcCc-----ccCCccc
Confidence            58998 5   4567788999999  999999999999999 4433222               11111     1111123


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcCc
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKHP  108 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~  108 (133)
                      ..+..+.+|+.+||..||.+||++.+++++-
T Consensus       273 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l  303 (337)
T 3ll6_A          273 TQYTVFHSLIRAMLQVNPEERLSIAEVVHQL  303 (337)
T ss_dssp             CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             ccchHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            4456788999999999999999999998754

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.33  E-value=7.6e-13  Score=93.56  Aligned_cols=87  Identities=17%  Similarity=0.375  Sum_probs=61.5

Q ss_pred             CCCccccC---CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhh-hCC-CCCcc-
Q psy9738           1 MAPEGGHH---RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIA-TNK-KPEIK-   74 (133)
Q Consensus         1 maPE~~~~---~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~-   74 (133)
                      +|||+ +.   ...++.++|+||  +|++++++++|..|| .+.....               ...... ... .+.+. 
T Consensus       189 ~aPE~-~~~~~~~~~~~~~Di~s--lG~il~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~~~~  249 (289)
T 3og7_A          189 MAPEV-IRMQDSNPYSFQSDVYA--FGIVLYELMTGQLPY-SNINNRD---------------QIIEMVGRGSLSPDLSK  249 (289)
T ss_dssp             CCHHH-HC----CCSCHHHHHHH--HHHHHHHHHHSSCTT-SSCCCHH---------------HHHHHHHHTSCCCCTTS
T ss_pred             cCchh-hcccCCCCCCcccchHH--HHHHHHHHHHCCCCc-cccchHH---------------HHHHHhcccccCcchhh
Confidence            58888 54   556788999999  999999999999999 5433222               121111 111 11111 


Q ss_pred             hhhhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          75 EKEKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        75 ~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      .....++.+.+|+.+||..+|.+||++.++++
T Consensus       250 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          250 VRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            12457889999999999999999999999874

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.33  E-value=3e-13  Score=97.19  Aligned_cols=85  Identities=13%  Similarity=0.160  Sum_probs=63.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   78 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++ |..|| .+.....               ......... ....  +..
T Consensus       233 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~t~g~~p~-~~~~~~~---------------~~~~~~~~~~~~~~--~~~  291 (333)
T 2i1m_A          233 MAPES-IFDCVYTVQSDVWS--YGILLWEIFSLGLNPY-PGILVNS---------------KFYKLVKDGYQMAQ--PAF  291 (333)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHTTTSCCSS-TTCCSSH---------------HHHHHHHHTCCCCC--CTT
T ss_pred             cCHHH-hccCCCChHHHHHH--HHHHHHHHHcCCCCCC-cccchhH---------------HHHHHHhcCCCCCC--CCC
Confidence            58898 66778899999999  9999999998 88999 5433222               222222221 1222  345


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      .+..+.+++.+||..||.+||++.++++
T Consensus       292 ~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          292 APKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            6889999999999999999999999874

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.33  E-value=3.9e-13  Score=105.05  Aligned_cols=84  Identities=13%  Similarity=0.236  Sum_probs=65.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++||||  +|+++++|++ |..|| .+.....               ....+........  +...
T Consensus       539 ~APE~-~~~~~~~~~sDvwS--lGv~l~ellt~G~~Pf-~~~~~~~---------------~~~~i~~~~~~~~--p~~~  597 (635)
T 4fl3_A          539 YAPEC-INYYKFSSKSDVWS--FGVLMWEAFSYGQKPY-RGMKGSE---------------VTAMLEKGERMGC--PAGC  597 (635)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTTCCSS-TTCCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             eChhh-hcCCCCCcHHHHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            68999 77788999999999  9999999998 99999 5443222               2333333333333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +..+.+++.+||..||.+||++.+++
T Consensus       598 ~~~l~~li~~cl~~dP~~RPs~~~l~  623 (635)
T 4fl3_A          598 PREMYDLMNLCWTYDVENRPGFAAVE  623 (635)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             CHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence            89999999999999999999999986

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.33  E-value=9e-13  Score=94.44  Aligned_cols=95  Identities=17%  Similarity=0.218  Sum_probs=63.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-----CCc--
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-----PEI--   73 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--   73 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|+.|| .+..+........+        ..........     +..  
T Consensus       208 ~aPE~-~~~~~~~~~~Di~s--lG~il~ell~g~~p~-~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~  275 (321)
T 2qkw_B          208 IDPEY-FIKGRLTEKSDVYS--FGVVLFEVLCARSAI-VQSLPREMVNLAEW--------AVESHNNGQLEQIVDPNLAD  275 (321)
T ss_dssp             CCHHH-HHHCBCCTHHHHHH--HHHHHHHHHHCCTTC-SCSSSSSCCCHHHH--------THHHHTTTCCCSSSSSSCTT
T ss_pred             cCHHH-hcCCCCCcccchHh--HHHHHHHHHhCCCcc-cccCcHHHHHHHHH--------hhhccccccHHHhcChhhcc
Confidence            58998 66778999999999  999999999999999 54433221110000        0000000000     111  


Q ss_pred             chhhhhcHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          74 KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        74 ~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      ..+...+..+.+++.+||..||.+||++.+++++
T Consensus       276 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          276 KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            1124456788999999999999999999999854

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.32  E-value=9.1e-13  Score=93.84  Aligned_cols=88  Identities=16%  Similarity=0.328  Sum_probs=63.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| .+.....             ......+.....+... ....+
T Consensus       203 ~aPE~-~~~~~~~~~~Dv~s--lG~il~~l~~g~~p~-~~~~~~~-------------~~~~~~~~~~~~~~~~-~~~~~  264 (310)
T 2wqm_A          203 MSPER-IHENGYNFKSDIWS--LGCLLYEMAALQSPF-YGDKMNL-------------YSLCKKIEQCDYPPLP-SDHYS  264 (310)
T ss_dssp             CCHHH-HTTCCCCHHHHHHH--HHHHHHHHHHSSCTT-C---CCH-------------HHHHHHHHTTCSCCCC-TTTSC
T ss_pred             eChHH-hCCCCCCchhhHHH--HHHHHHHHHhCCCCC-cccchhH-------------HHHHHHhhcccCCCCc-ccccC
Confidence            58898 77788899999999  999999999999999 5432211             0011222222222221 24578


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+.+++.+||..||.+||++.++++
T Consensus       265 ~~l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          265 EELRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            89999999999999999999999874

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.32  E-value=2.5e-13  Score=96.92  Aligned_cols=88  Identities=16%  Similarity=0.185  Sum_probs=61.1

Q ss_pred             CCCccccCCC---CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhh
Q psy9738           1 MAPEGGHHRK---QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKE   77 (133)
Q Consensus         1 maPE~~~~~~---~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (133)
                      +|||+ +...   .++.++|+||  +|++++++++|..|| .........             ....+..  ....+...
T Consensus       210 ~aPE~-~~~~~~~~~~~~~Di~s--lG~il~el~~g~~p~-~~~~~~~~~-------------~~~~~~~--~~~~~~~~  270 (317)
T 2buj_A          210 RAPEL-FSVQSHCVIDERTDVWS--LGCVLYAMMFGEGPY-DMVFQKGDS-------------VALAVQN--QLSIPQSP  270 (317)
T ss_dssp             CCGGG-SSCCSEEEECTHHHHHH--HHHHHHHHHHSSCTT-HHHHHTTSC-------------HHHHHHC--C--CCCCT
T ss_pred             CCHhH-hccCCCcCCCchhhHHH--HHHHHHHHHhCCCCh-hhhhcccch-------------hhHHhhc--cCCCCccc
Confidence            58998 6543   3688999999  999999999999999 321110000             1111111  11122234


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      ..+..+.+++.+||..||.+||++.+++++
T Consensus       271 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          271 RHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            578899999999999999999999999864

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.32  E-value=5.7e-13  Score=96.73  Aligned_cols=91  Identities=15%  Similarity=0.104  Sum_probs=63.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch----h
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE----K   76 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~   76 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++|..|| .+......       .+   ........ .....+..    .
T Consensus       235 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~~g~~pf-~~~~~~~~-------~~---~~~~~~~~-~~~~~~~~~~~~~  299 (352)
T 2jii_A          235 ISMDL-HKGCGPSRRSDLQS--LGYCMLKWLYGFLPW-TNCLPNTE-------DI---MKQKQKFV-DKPGPFVGPCGHW  299 (352)
T ss_dssp             CCHHH-HTTCCCCHHHHHHH--HHHHHHHHHHSCCTT-GGGTTCHH-------HH---HHHHHHHH-HSCCCEECTTSCE
T ss_pred             cCHHH-HccCCCCchhhHHH--HHHHHHHHHhCCCCc-ccCCcCHH-------HH---HHHHHhcc-CChhhhhhhcccc
Confidence            58898 77778999999999  999999999999999 44321110       00   00111111 12222211    1


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..++..+.+++.+||..||.+||++.++++
T Consensus       300 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          300 IRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             ECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             CCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            245899999999999999999999999863

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.31  E-value=6e-13  Score=94.50  Aligned_cols=90  Identities=14%  Similarity=0.309  Sum_probs=63.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch--hhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE--KEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~   78 (133)
                      ||||+ +.+..++.++|+||  +|++++++++|..|| .+.....               ..........+....  ...
T Consensus       179 ~aPE~-~~~~~~~~~~Di~s--lG~~l~~ll~g~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  239 (294)
T 4eqm_A          179 FSPEQ-AKGEATDECTDIYS--IGIVLYEMLVGEPPF-NGETAVS---------------IAIKHIQDSVPNVTTDVRKD  239 (294)
T ss_dssp             CCHHH-HHTCCCCTTHHHHH--HHHHHHHHHHSSCSS-CSSCHHH---------------HHHHHHSSCCCCHHHHSCTT
T ss_pred             cCHhH-hcCCCCCchHhHHH--HHHHHHHHHhCCCCC-CCCChHH---------------HHHHHhhccCCCcchhcccC
Confidence            68998 77788899999999  999999999999999 5443222               222223333232211  245


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPF  109 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~  109 (133)
                      ++..+.+++.+||..||.+||+..+.+.+.+
T Consensus       240 ~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l  270 (294)
T 4eqm_A          240 IPQSLSNVILRATEKDKANRYKTIQEMKDDL  270 (294)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCSSHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcCCHhHccccHHHHHHHH
Confidence            7889999999999999999994444444444

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.31  E-value=3.6e-13  Score=98.92  Aligned_cols=85  Identities=9%  Similarity=0.280  Sum_probs=61.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|++++++++ |..|| .......               ....+........  +...
T Consensus       217 ~aPE~-~~~~~~~~~~Dv~S--lG~il~ellt~g~~P~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  275 (373)
T 2qol_A          217 TSPEA-IAYRKFTSASDVWS--YGIVLWEVMSYGERPY-WEMSNQD---------------VIKAVDEGYRLPP--PMDC  275 (373)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTC-CTT-TTCCHHH---------------HHHHHHTTEECCC--CTTC
T ss_pred             cChhh-hccCCcCchhcHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--Cccc
Confidence            58998 77778999999999  9999999997 99999 5433211               2222222211111  3457


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       276 ~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          276 PAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             BHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            889999999999999999999999763

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.30  E-value=3.6e-13  Score=97.64  Aligned_cols=92  Identities=10%  Similarity=0.027  Sum_probs=61.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch---hh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE---KE   77 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~   77 (133)
                      ||||+ +.+..++.++||||  +|+++++|++|..|| .+......       ..   ...........+..+..   ..
T Consensus       227 ~aPE~-~~~~~~~~~~Di~s--lG~il~ell~g~~pf-~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~~  292 (345)
T 2v62_A          227 TSLDA-HKGVALSRRSDVEI--LGYCMLRWLCGKLPW-EQNLKDPV-------AV---QTAKTNLLDELPQSVLKWAPSG  292 (345)
T ss_dssp             CCHHH-HHTCCCCHHHHHHH--HHHHHHHHHHSSCTT-GGGTTCHH-------HH---HHHHHHHHHTTTHHHHHHSCTT
T ss_pred             cCHHH-hcCCCCCchhhHHH--HHHHHHHHHhCCCCc-cccccccH-------HH---HHHHHhhcccccHHHHhhcccc
Confidence            68998 77778899999999  999999999999999 43221110       00   00111111111110000   11


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+..+.+++.+||..||.+||++.++++
T Consensus       293 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          293 SSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             SCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            56789999999999999999999999863

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.30  E-value=2.8e-12  Score=91.99  Aligned_cols=91  Identities=13%  Similarity=0.264  Sum_probs=58.6

Q ss_pred             CCCccccCCCCCCCc------cccchhHHHHHHHHHHhC----------CCCCCCCCCCCCCcccchhhHHhhHHHHHHH
Q psy9738           1 MAPEGGHHRKQYGPK------VGYFGHWVSMAYLKMIEG----------EPPLIWNENPLRPHFLIPYLFILSCRQALYL   64 (133)
Q Consensus         1 maPE~~~~~~~~~~~------~Diws~~~g~~~~~~~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (133)
                      ||||+ +.+..+...      +||||  +|+++++|++|          ..|| .........+.           ....
T Consensus       213 ~aPE~-~~~~~~~~~~~~~~~~Diws--lG~il~el~tg~~~~~~~~~~~~p~-~~~~~~~~~~~-----------~~~~  277 (337)
T 3mdy_A          213 MPPEV-LDESLNRNHFQSYIMADMYS--FGLILWEVARRCVSGGIVEEYQLPY-HDLVPSDPSYE-----------DMRE  277 (337)
T ss_dssp             CCHHH-HTTCCCTTCTHHHHHHHHHH--HHHHHHHHHTTBCBTTBCCCCCCTT-TTTSCSSCCHH-----------HHHH
T ss_pred             eChhh-cccccCCccccCccccchHH--HHHHHHHHHhccCcccccccccccH-hhhcCCCCchh-----------hhHH
Confidence            68998 666555554      89999  99999999999          5555 32211110000           1111


Q ss_pred             hhh--CCCCCcch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          65 IAT--NKKPEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        65 ~~~--~~~~~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ...  ...+.++.   ....+..+.+++.+||..||.+||++.++++
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  324 (337)
T 3mdy_A          278 IVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKK  324 (337)
T ss_dssp             HHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHH
Confidence            111  11122211   2346678999999999999999999999875

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.30  E-value=6.9e-13  Score=103.95  Aligned_cols=85  Identities=12%  Similarity=0.216  Sum_probs=65.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++ |..|| .+.....               ....+.......+  +...
T Consensus       559 ~aPE~-~~~~~~~~~~DiwS--lG~il~ellt~g~~Pf-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  617 (656)
T 2j0j_A          559 MAPES-INFRRFTSASDVWM--FGVCMWEILMHGVKPF-QGVKNND---------------VIGRIENGERLPM--PPNC  617 (656)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCTT-TTCCHHH---------------HHHHHHHTCCCCC--CTTC
T ss_pred             eCHHH-hcCCCCCchhhHHH--HHHHHHHHHHcCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--Cccc
Confidence            68999 77778999999999  9999999996 99999 5433222               2333333333333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++.+.+++.+||..||.+||++.++++
T Consensus       618 ~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          618 PPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            899999999999999999999999863

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.30  E-value=1.2e-12  Score=92.52  Aligned_cols=91  Identities=18%  Similarity=0.370  Sum_probs=59.7

Q ss_pred             CCCccccCCC------CCCCccccchhHHHHHHHHHHhC----------CCCCCCCCCCCCCcccchhhHHhhHHHHHHH
Q psy9738           1 MAPEGGHHRK------QYGPKVGYFGHWVSMAYLKMIEG----------EPPLIWNENPLRPHFLIPYLFILSCRQALYL   64 (133)
Q Consensus         1 maPE~~~~~~------~~~~~~Diws~~~g~~~~~~~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (133)
                      +|||+ +.+.      .++.++|+||  +|+++++|++|          ..|| .........+.           ....
T Consensus       184 ~aPE~-~~~~~~~~~~~~~~~~Dvws--lG~il~el~tg~~~~~~~~~~~~pf-~~~~~~~~~~~-----------~~~~  248 (301)
T 3q4u_A          184 MAPEV-LDETIQVDCFDSYKRVDIWA--FGLVLWEVARRMVSNGIVEDYKPPF-YDVVPNDPSFE-----------DMRK  248 (301)
T ss_dssp             CCHHH-HTTCCCTTCHHHHHHHHHHH--HHHHHHHHHTTBCBTTBCCCCCCTT-TTTSCSSCCHH-----------HHHH
T ss_pred             eChhh-hcCcCCCCcccCCchhhHHH--HHHHHHHHHhhhcCccccccccccc-cccCCCCcchh-----------hhhH
Confidence            58998 5544      3446899999  99999999999          7777 43322211110           1111


Q ss_pred             hh--hCCCCCcch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          65 IA--TNKKPEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        65 ~~--~~~~~~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..  ....+.++.   ....+..+.+++.+||..||.+|||+.++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          249 VVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             HHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             HHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            11  111222221   1235678999999999999999999999874

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.30  E-value=3.6e-13  Score=94.86  Aligned_cols=84  Identities=10%  Similarity=0.214  Sum_probs=58.6

Q ss_pred             CCCccccCC-CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHR-KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~-~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+ ..++.++|+||  +|+++++|++|..|+ .......               ........ ...+  +...
T Consensus       184 ~aPE~-~~~~~~~~~~~Diws--lG~il~el~~g~~~~-~~~~~~~---------------~~~~~~~~-~~~~--~~~~  241 (289)
T 4fvq_A          184 VPPEC-IENPKNLNLATDKWS--FGTTLWEICSGGDKP-LSALDSQ---------------RKLQFYED-RHQL--PAPK  241 (289)
T ss_dssp             SCHHH-HHCGGGCCHHHHHHH--HHHHHHHHHTTTCCT-TTTSCHH---------------HHHHHHHT-TCCC--CCCS
T ss_pred             cCHHH-hCCCCCCCchhHHHH--HHHHHHHHHcCCCCC-ccccchH---------------HHHHHhhc-cCCC--CCCC
Confidence            68998 544 77899999999  999999999965544 2322211               11111111 1222  2334


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+|||+.++++
T Consensus       242 ~~~l~~li~~~l~~dp~~Rps~~~ll~  268 (289)
T 4fvq_A          242 AAELANLINNCMDYEPDHRPSFRAIIR  268 (289)
T ss_dssp             SCTTHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            677899999999999999999999875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.29  E-value=6.7e-13  Score=101.73  Aligned_cols=90  Identities=16%  Similarity=0.234  Sum_probs=66.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +....|+.++||||  +|+++++|++ |..|| .+.....               ....+........  +..+
T Consensus       431 ~aPE~-~~~~~~~~~sDvwS--lGv~l~el~t~g~~P~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  489 (535)
T 2h8h_A          431 TAPEA-ALYGRFTIKSDVWS--FGILLTELTTKGRVPY-PGMVNRE---------------VLDQVERGYRMPC--PPEC  489 (535)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHTTTTCCSS-TTCCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cCHHH-hccCCCCchhhHHH--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            68998 66778999999999  9999999999 89999 5432211               2222322222222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc--Ccccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK--HPFLK  111 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~--h~~~~  111 (133)
                      +..+.+|+.+||..||.+||++.+++.  ..++.
T Consensus       490 ~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          490 PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            889999999999999999999999874  34444

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.28  E-value=9.8e-13  Score=94.66  Aligned_cols=90  Identities=12%  Similarity=0.119  Sum_probs=60.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (133)
                      ||||+ +.+..++.++|+||  +|+++++|++|..|| .+.....  .          ......+..... .........
T Consensus       184 ~aPE~-~~~~~~~~~~Di~s--lG~il~ell~g~~Pf-~~~~~~~--~----------~~~~~~i~~~~~~~~~~~~~~~  247 (330)
T 2izr_A          184 MSINT-HLGKEQSRRDDLEA--LGHMFMYFLRGSLPW-QGLKADT--L----------KERYQKIGDTKRATPIEVLCEN  247 (330)
T ss_dssp             CCHHH-HTTCCCCHHHHHHH--HHHHHHHHHHSSCTT-TTCCCSS--H----------HHHHHHHHHHHHHSCHHHHTTT
T ss_pred             cChHH-HcCCCCCchhHHHH--HHHHHHHHhcCCCCc-ccccccc--H----------HHHHHHHHhhhccCCHHHHhcc
Confidence            68999 77888999999999  999999999999999 5543322  0          001111111100 010000111


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      .+.+.+++..||..||..||+++++.+
T Consensus       248 ~p~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          248 FPEMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             CHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             ChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            238999999999999999999988753

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.27  E-value=1.7e-13  Score=98.51  Aligned_cols=100  Identities=10%  Similarity=0.077  Sum_probs=63.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| ..........................+........  +...+
T Consensus       197 ~aPE~-~~~~~~~~~~Di~s--lG~il~~ll~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  270 (327)
T 3lxl_A          197 YAPES-LSDNIFSRQSDVWS--FGVVLYELFTYCDKS-CSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPA--PPACP  270 (327)
T ss_dssp             SCHHH-HHHCEEEHHHHHHH--HHHHHHHHHTTTCGG-GSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCC--CTTCC
T ss_pred             cCHHH-hccCCCChHHhHHH--HHHHHHHHHhCCCCC-ccccchhhhhcccccccccHHHHHHHhhcccCCCC--CCccc
Confidence            57888 66777888999999  999999999999998 43211000000000000000111122222222222  45678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +.+.+++.+||..||.+||++.++++
T Consensus       271 ~~l~~li~~~l~~dP~~Rps~~ell~  296 (327)
T 3lxl_A          271 AEVHELMKLCWAPSPQDRPSFSALGP  296 (327)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999999864

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.27  E-value=8e-13  Score=93.53  Aligned_cols=100  Identities=10%  Similarity=0.038  Sum_probs=63.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCC-CcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLR-PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++||||  +|++++++++|..|+ ....... ...................+........  +...
T Consensus       184 ~aPE~-~~~~~~~~~~Di~s--lG~~l~~l~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  257 (295)
T 3ugc_A          184 YAPES-LTESKFSVASDVWS--FGVVLYELFTYIEKS-KSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR--PDGC  257 (295)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHHTTCTT-CSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCC--CTTC
T ss_pred             eCcHH-hcCCCCChHHHHHH--HHHHHHHHHhccccc-CCChHHHHhhhcCccccchhHHHHHHHHhccCcCCC--CcCc
Confidence            58898 77778899999999  999999999999888 3211000 0000000000000011122222222222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+|||+.++++
T Consensus       258 ~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          258 PDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            899999999999999999999999863

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.27  E-value=1.9e-12  Score=92.38  Aligned_cols=86  Identities=19%  Similarity=0.312  Sum_probs=61.5

Q ss_pred             CCCccccCC---------CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCC
Q psy9738           1 MAPEGGHHR---------KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKP   71 (133)
Q Consensus         1 maPE~~~~~---------~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (133)
                      +|||+ +..         ..++.++|+||  +|++++++++|..|| .......               ....+.....+
T Consensus       201 ~aPE~-~~~~~~~~~~~~~~~~~~~Di~s--lG~il~el~~g~~p~-~~~~~~~---------------~~~~~~~~~~~  261 (319)
T 2y4i_B          201 LAPEI-IRQLSPDTEEDKLPFSKHSDVFA--LGTIWYELHAREWPF-KTQPAEA---------------IIWQMGTGMKP  261 (319)
T ss_dssp             SCHHH-HSCBSCC--CCCSCCCHHHHHHH--HHHHHHHHHHSSCSS-SSCCHHH---------------HHHHHHTTCCC
T ss_pred             cChHH-hhhccccccccccCCCchhhHHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHhccCCCC
Confidence            57887 432         45788999999  999999999999999 4432211               22222222222


Q ss_pred             CcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          72 EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        72 ~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ... ....+..+.+++.+||..||.+||++.++++
T Consensus       262 ~~~-~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          262 NLS-QIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             CCC-CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             CCC-cCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            221 2346788999999999999999999999874

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.26  E-value=1.1e-12  Score=94.24  Aligned_cols=99  Identities=14%  Similarity=0.238  Sum_probs=60.0

Q ss_pred             CCCccccCC-----CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhH----HhhHHHHHHHhhhC-CC
Q psy9738           1 MAPEGGHHR-----KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLF----ILSCRQALYLIATN-KK   70 (133)
Q Consensus         1 maPE~~~~~-----~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~   70 (133)
                      +|||+ +.+     ..++.++||||  +|+++++|++|..|| .+.....   ..++..    .............. ..
T Consensus       200 ~aPE~-~~~~~~~~~~~~~~~Diws--lG~il~el~tg~~pf-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (322)
T 3soc_A          200 MAPEV-LEGAINFQRDAFLRIDMYA--MGLVLWELASRCTAA-DGPVDEY---MLPFEEEIGQHPSLEDMQEVVVHKKKR  272 (322)
T ss_dssp             CCHHH-HTTCCCCCHHHHHHHHHHH--HHHHHHHHHTTBTTS-SSCCCCC---CCTTHHHHCSSCCHHHHHHHHTTSCCC
T ss_pred             cCHhh-cccccccCcCCCccchhHH--HHHHHHHHHhCCCCC-CCCcchh---ccchhhhhccCCchhhhhhhhhcccCC
Confidence            58898 544     34556789999  999999999999999 5433211   011110    00000011111111 11


Q ss_pred             CCcch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          71 PEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        71 ~~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +.+..   ....+..+.+|+.+||..||.+|||+.++++
T Consensus       273 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          273 PVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             CCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            22211   1223566899999999999999999999874

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.26  E-value=3e-13  Score=96.39  Aligned_cols=87  Identities=20%  Similarity=0.180  Sum_probs=62.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++||||  +|++++++++|..|+ .............         .........      +...+
T Consensus       189 ~aPE~-~~~~~~~~~~Di~s--lG~~l~el~~g~~~~-~~~~~~~~~~~~~---------~~~~~~~~~------~~~~~  249 (310)
T 3s95_A          189 MAPEM-INGRSYDEKVDVFS--FGIVLCEIIGRVNAD-PDYLPRTMDFGLN---------VRGFLDRYC------PPNCP  249 (310)
T ss_dssp             CCHHH-HTTCCCCTHHHHHH--HHHHHHHHHHTCCSS-TTTSCBCTTSSBC---------HHHHHHHTC------CTTCC
T ss_pred             eCHHH-hcCCCCCcHHHHHH--HHHHHHHHhcCCCCC-cchhhhHHHHhhh---------hhccccccC------CCCCC
Confidence            58999 78888999999999  999999999999988 4332222111100         001111111      23456


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +.+.+++.+||..||.+||++.++++
T Consensus       250 ~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          250 PSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             TTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHH
Confidence            78899999999999999999999874

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.26  E-value=1e-12  Score=95.86  Aligned_cols=90  Identities=4%  Similarity=0.018  Sum_probs=61.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcch----h
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKE----K   76 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~   76 (133)
                      ||||+ +.+..++.++||||  +|+++++|++|..|| .+..... ..    ..      ............+..    .
T Consensus       228 ~aPE~-~~~~~~~~~~Di~s--lG~~l~el~~g~~Pf-~~~~~~~-~~----~~------~~~~~~~~~~~~~~~~~~~~  292 (364)
T 3op5_A          228 TSIDA-HNGVAPSRRGDLEI--LGYCMIQWLTGHLPW-EDNLKDP-KY----VR------DSKIRYRENIASLMDKCFPA  292 (364)
T ss_dssp             CCHHH-HTTCCCCHHHHHHH--HHHHHHHHHHSCCTT-GGGTTCH-HH----HH------HHHHHHHHCHHHHHHHHSCT
T ss_pred             cCHHH-hCCCCCCchhhHHH--HHHHHHHHHhCCCCc-cccccCH-HH----HH------HHHHHhhhhHHHHHHHhccc
Confidence            68999 77888999999999  999999999999999 4322221 00    00      000000000000000    1


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      ...+..+.+++..|+..+|.+||++.+++
T Consensus       293 ~~~~~~~~~li~~cl~~~p~~RP~~~~l~  321 (364)
T 3op5_A          293 ANAPGEIAKYMETVKLLDYTEKPLYENLR  321 (364)
T ss_dssp             TCCCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred             ccCHHHHHHHHHHHhcCCCCCCCCHHHHH
Confidence            34578899999999999999999999875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.26  E-value=2.8e-13  Score=95.97  Aligned_cols=100  Identities=11%  Similarity=0.103  Sum_probs=63.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|+ ............+.............+........  +...+
T Consensus       196 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  269 (302)
T 4e5w_A          196 YAPEC-LMQSKFYIASDVWS--FGVTLHELLTYCDSD-SSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC--PPNCP  269 (302)
T ss_dssp             CCHHH-HHHCEEEHHHHHHH--HHHHHHHHHTTTCGG-GSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCC--CTTCC
T ss_pred             cCCee-ecCCCCCcchhHHH--HHHHHHHHHHccCCC-cchhhHHhhccCCcccccCHHHHHHHHhccCCCCC--CCCCC
Confidence            57888 66777888999999  999999999998876 22100000000000000011111222222222222  45678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +.+.+++.+||..||.+|||+.++++
T Consensus       270 ~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          270 DEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            99999999999999999999999874

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.25  E-value=7.5e-13  Score=94.87  Aligned_cols=95  Identities=16%  Similarity=0.134  Sum_probs=61.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCC--CCCCcccchhhHHhhHHHHHHHhhhCC--------C
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNEN--PLRPHFLIPYLFILSCRQALYLIATNK--------K   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~   70 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| ....  .......         ...........        .
T Consensus       202 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~g~~pf-~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~  268 (326)
T 3uim_A          202 IAPEY-LSTGKSSEKTDVFG--YGVMLLELITGQRAF-DLARLANDDDVML---------LDWVKGLLKEKKLEALVDVD  268 (326)
T ss_dssp             CCHHH-HHHSEECHHHHHHH--HHHHHHHHHHCCCSB-CHHHHTTTSCSBH---------HHHHTTTTSSCCSTTSSCTT
T ss_pred             cCHHH-hccCCCCccccchh--HHHHHHHHHhCCCcc-cccccccccchhH---------HHHHHHHhhchhhhhhcChh
Confidence            58898 66777889999999  999999999999999 3110  0000000         00000000000        0


Q ss_pred             CCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCc
Q psy9738          71 PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHP  108 (133)
Q Consensus        71 ~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~  108 (133)
                      .....+...+..+.+++.+||..||.+|||+.++++|-
T Consensus       269 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L  306 (326)
T 3uim_A          269 LQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML  306 (326)
T ss_dssp             CTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred             hccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence            00001234567889999999999999999999998654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.24  E-value=4.8e-13  Score=95.89  Aligned_cols=99  Identities=11%  Similarity=0.094  Sum_probs=63.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCC-CcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLR-PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|| ....... ....... ...........+........  +...
T Consensus       204 ~aPE~-~~~~~~~~~~Di~s--lG~il~~ll~g~~p~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~  276 (318)
T 3lxp_A          204 YAPEC-LKEYKFYYASDVWS--FGVTLYELLTHCDSS-QSPPTKFLELIGIAQ-GQMTVLRLTELLERGERLPR--PDKC  276 (318)
T ss_dssp             CCHHH-HHHCEEEHHHHHHH--HHHHHHHHHTTTCGG-GSHHHHHHHHHCSCC-HHHHHHHHHHHHHTTCCCCC--CTTC
T ss_pred             eChHH-hcCCCCCcHHHHHH--HHHHHHHHHhCCCcc-cccchhhhhhhcccc-cchhHHHHHHHHhcccCCCC--Cccc
Confidence            57888 66777888999999  999999999999998 3211000 0000000 00000001111222222222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+|+.+||..||.+||++.++++
T Consensus       277 ~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          277 PAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            899999999999999999999999873

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.23  E-value=1.2e-12  Score=91.87  Aligned_cols=85  Identities=15%  Similarity=0.283  Sum_probs=64.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+..++.++|+||  +|+++++|++|..|+ ....  .               ....+...   .+  +...+
T Consensus       188 ~aPE~-~~~~~~~~~~Di~s--lG~il~~l~~~~~~~-~~~~--~---------------~~~~~~~~---~~--~~~~~  241 (284)
T 2a19_B          188 MSPEQ-ISSQDYGKEVDLYA--LGLILAELLHVCDTA-FETS--K---------------FFTDLRDG---II--SDIFD  241 (284)
T ss_dssp             SCHHH-HHCSCCCTHHHHHH--HHHHHHHHHSCCSSH-HHHH--H---------------HHHHHHTT---CC--CTTSC
T ss_pred             cChhh-hccCCCcchhhhHH--HHHHHHHHHhcCCcc-hhHH--H---------------HHHHhhcc---cc--cccCC
Confidence            58898 77778899999999  999999999998877 3110  0               11111111   11  23467


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      ..+.+++.+||..||.+||++.++++|.+.-
T Consensus       242 ~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          242 KKEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            8899999999999999999999999887643

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.23  E-value=7.9e-12  Score=94.90  Aligned_cols=91  Identities=8%  Similarity=0.059  Sum_probs=62.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..++.++||||  +|+++++|++|..|| .+........     .   ...............+  ...++
T Consensus       180 ~aPE~-~~~~~~s~~sDvwS--lGvil~elltG~~Pf-~~~~~~~~~~-----~---~~~i~~~~~~~~~~~l--~~~~p  245 (483)
T 3sv0_A          180 ASVNT-HLGIEQSRRDDLES--LGYVLMYFLRGSLPW-QGLKAGTKKQ-----K---YEKISEKKVATSIEAL--CRGYP  245 (483)
T ss_dssp             CCHHH-HTTCCCCHHHHHHH--HHHHHHHHHHSSCTT-SSCCCSSHHH-----H---HHHHHHHHHHSCHHHH--HTTSC
T ss_pred             cCHHH-hcCCCCChHHHHHH--HHHHHHHHHhCCCCC-ccccchhHHH-----H---HHHHhhccccccHHHH--hcCCc
Confidence            58898 77888999999999  999999999999999 5443322000     0   0000011111110111  24568


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      .++.+|+..||..+|.+||++.+++
T Consensus       246 ~~l~~li~~cl~~dP~~RPs~~el~  270 (483)
T 3sv0_A          246 TEFASYFHYCRSLRFDDKPDYSYLK  270 (483)
T ss_dssp             HHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHH
Confidence            8999999999999999999998864

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.23  E-value=3.6e-12  Score=90.55  Aligned_cols=98  Identities=18%  Similarity=0.235  Sum_probs=59.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      +|||+ +.+ .++.++|+||  +|++++++++|..|| ...........+.. .+......+...........  +...+
T Consensus       202 ~aPE~-~~~-~~~~~~Dv~s--lG~il~~l~~g~~p~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~  273 (307)
T 2nru_A          202 MAPEA-LRG-EITPKSDIYS--FGVVLLEIITGLPAV-DEHREPQLLLDIKE-EIEDEEKTIEDYIDKKMNDA--DSTSV  273 (307)
T ss_dssp             CCHHH-HTT-EECTHHHHHH--HHHHHHHHHHCCCSB-CTTBSSSBTTHHHH-HHHTTSCCHHHHSCSSCSCC--CHHHH
T ss_pred             CChHH-hcC-CCCccchhHH--HHHHHHHHHHCCCCc-ccCcchHHHHHHHH-Hhhhhhhhhhhhcccccccc--chHHH
Confidence            57888 543 4788999999  999999999999999 44332220000000 00000000000000111111  23456


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+.+++.+||..+|.+||++.++++
T Consensus       274 ~~l~~li~~cl~~~p~~Rps~~~l~~  299 (307)
T 2nru_A          274 EAMYSVASQCLHEKKNKRPDIKKVQQ  299 (307)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            78899999999999999999999874

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.20  E-value=6.9e-12  Score=90.22  Aligned_cols=91  Identities=14%  Similarity=0.309  Sum_probs=57.8

Q ss_pred             CCCccccCCC------CCCCccccchhHHHHHHHHHHhC----------CCCCCCCCCCCCCcccchhhHHhhHHHHHHH
Q psy9738           1 MAPEGGHHRK------QYGPKVGYFGHWVSMAYLKMIEG----------EPPLIWNENPLRPHFLIPYLFILSCRQALYL   64 (133)
Q Consensus         1 maPE~~~~~~------~~~~~~Diws~~~g~~~~~~~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (133)
                      +|||+ +.+.      .++.++|+||  +|+++++|++|          ..|| ..........          . ....
T Consensus       218 ~aPE~-~~~~~~~~~~~~~~~~Di~s--lG~il~el~tg~~~~~~~~~~~~p~-~~~~~~~~~~----------~-~~~~  282 (342)
T 1b6c_B          218 MAPEV-LDDSINMKHFESFKRADIYA--MGLVFWEIARRCSIGGIHEDYQLPY-YDLVPSDPSV----------E-EMRK  282 (342)
T ss_dssp             CCHHH-HTSCCCTTCHHHHHHHHHHH--HHHHHHHHHTTBCBTTBCCCCCCTT-TTTSCSSCCH----------H-HHHH
T ss_pred             CCHhh-hcccccccccccCCcccHHH--HHHHHHHHHhccCcCCcccccccCc-cccCcCcccH----------H-HHHH
Confidence            58888 5443      2336799999  99999999999          6677 4332211000          0 1111


Q ss_pred             hh-h-CCCCCcch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          65 IA-T-NKKPEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        65 ~~-~-~~~~~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      .. . ...+.++.   ....+..+.+++.+||..||.+||++.++++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~  329 (342)
T 1b6c_B          283 VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  329 (342)
T ss_dssp             HHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            11 1 11223321   1234567889999999999999999999875

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.18  E-value=2.3e-12  Score=92.58  Aligned_cols=108  Identities=13%  Similarity=0.213  Sum_probs=62.1

Q ss_pred             CCCccccCC-------CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcc-cchhh--HHhhHHHHHHHhh-hCC
Q psy9738           1 MAPEGGHHR-------KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHF-LIPYL--FILSCRQALYLIA-TNK   69 (133)
Q Consensus         1 maPE~~~~~-------~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~-~~~   69 (133)
                      +|||+ +.+       ..++.++||||  +|+++++|++|..|+ .......... .+...  ............. ...
T Consensus       195 ~aPE~-~~~~~~~~~~~~~~~~~Diws--lG~il~ell~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (336)
T 3g2f_A          195 MAPEV-LEGAVNLRDXESALKQVDMYA--LGLIYWEIFMRCTDL-FPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQ  270 (336)
T ss_dssp             CCHHH-HTTCCCGGGHHHHHHHHHHHH--HHHHHHHHHTTBGGG-STTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCC
T ss_pred             eCchh-hcCCcccccccccccccchHH--HHHHHHHHHhcCCcC-CCccchhHHHHhhhcccCCCchHHHHHhhhccccc
Confidence            58888 544       45567899999  999999999997666 3332221110 00000  0000000001111 111


Q ss_pred             CCCcc----hhhhhcHHHHHHHHHHhhhcccccCCHHHHh------cCccccc
Q psy9738          70 KPEIK----EKEKLSQIFQDFLDQCLEEEVETRASASLLL------KHPFLKI  112 (133)
Q Consensus        70 ~~~~~----~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell------~h~~~~~  112 (133)
                      .+.++    .....++.+.+|+.+||..||.+|||+.+++      .++|-+.
T Consensus       271 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~  323 (336)
T 3g2f_A          271 RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN  323 (336)
T ss_dssp             CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred             CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence            12221    1123566899999999999999999999984      4566554

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.15  E-value=6.3e-12  Score=92.79  Aligned_cols=90  Identities=20%  Similarity=0.359  Sum_probs=60.3

Q ss_pred             CCCccccCC--------CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCC
Q psy9738           1 MAPEGGHHR--------KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPE   72 (133)
Q Consensus         1 maPE~~~~~--------~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (133)
                      +|||+ +.+        ..|+.++|+||  +|++++++++|..|| .+.......           ......+....+..
T Consensus       182 ~aPE~-~~~~~~~~~~~~~~~~~~DiwS--lG~il~el~tg~~Pf-~~~~~~~~~-----------~~~~~~~~~~~p~~  246 (396)
T 4eut_A          182 LHPDM-YERAVLRKDHQKKYGATVDLWS--IGVTFYHAATGSLPF-RPFEGPRRN-----------KEVMYKIITGKPSG  246 (396)
T ss_dssp             CCHHH-HHHHCC--CHHHHHHHHHHHHH--HHHHHHHHHHSSCSE-ECTTCTTTC-----------HHHHHHHHHSCCTT
T ss_pred             cCHHH-hhccccccccccCCCcHHHHHH--HHHHHHHHHHCCCCC-CCCCcccch-----------HHHHHHHhcCCCcc
Confidence            57787 432        46778899999  999999999999999 432221110           01233333322211


Q ss_pred             ------------------c----chhhhhcHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          73 ------------------I----KEKEKLSQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        73 ------------------~----~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                                        +    ......+..+.+++.+||..||.+|+++.+++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l  301 (396)
T 4eut_A          247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFF  301 (396)
T ss_dssp             CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHH
T ss_pred             cchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHH
Confidence                              0    01234667889999999999999999999874

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.14  E-value=2.5e-11  Score=87.15  Aligned_cols=100  Identities=10%  Similarity=0.059  Sum_probs=62.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCC-CCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENP-LRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      +|||+ +.+..++.++|+||  +|++++++++|..|+ ..... .....................+........  +...
T Consensus       215 ~aPE~-~~~~~~~~~~Di~s--lG~il~el~tg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  288 (326)
T 2w1i_A          215 YAPES-LTESKFSVASDVWS--FGVVLYELFTYIEKS-KSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR--PDGC  288 (326)
T ss_dssp             CCHHH-HHHCEEEHHHHHHH--HHHHHHHHHHTTCGG-GSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCC--CTTC
T ss_pred             ECchh-hcCCCCCchhhHHH--HHHHHHHHHhcCCCC-CCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCC--CCcc
Confidence            57888 66667888999999  999999999999888 32100 000000000000000001111222222222  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+||++.++++
T Consensus       289 ~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          289 PDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            899999999999999999999999873

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.97  E-value=1e-10  Score=82.96  Aligned_cols=80  Identities=14%  Similarity=0.071  Sum_probs=54.3

Q ss_pred             CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCc-chhhhhcHHHHHHHHH
Q psy9738          11 QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEI-KEKEKLSQIFQDFLDQ   89 (133)
Q Consensus        11 ~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~   89 (133)
                      .++.++|+||  +|+++|+|++|..|| .+.+.......            .........+.. .....++..+.+++.+
T Consensus       178 ~~~~~~Di~s--lG~il~elltg~~Pf-~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~  242 (286)
T 3uqc_A          178 DANPQDDIRG--IGASLYALLVNRWPL-PEAGVRSGLAP------------AERDTAGQPIEPADIDRDIPFQISAVAAR  242 (286)
T ss_dssp             TCCHHHHHHH--HHHHHHHHHHSEECS-CCCSBCCCSEE------------CCBCTTSCBCCHHHHCTTSCHHHHHHHHH
T ss_pred             CCCchhHHHH--HHHHHHHHHHCCCCC-CcCCcchhhHH------------HHHHhccCCCChhhcccCCCHHHHHHHHH
Confidence            4677899999  999999999999999 55443220000            000111111111 1124578899999999


Q ss_pred             HhhhcccccCCHHHHhc
Q psy9738          90 CLEEEVETRASASLLLK  106 (133)
Q Consensus        90 ~L~~~p~~R~s~~ell~  106 (133)
                      ||..||..| |+.++++
T Consensus       243 ~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          243 SVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             HHCTTSSCC-CHHHHHH
T ss_pred             HcccCCccC-CHHHHHH
Confidence            999999999 9999874

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.84  E-value=3.4e-10  Score=82.43  Aligned_cols=78  Identities=15%  Similarity=0.146  Sum_probs=55.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| .......                 .. ........    ..+
T Consensus       252 ~aPE~-~~~~~~~~~~Diws--lG~il~elltg~~pf-~~~~~~~-----------------~~-~~~~~~~~----~~~  305 (365)
T 3e7e_A          252 QCVEM-LSNKPWNYQIDYFG--VAATVYCMLFGTYMK-VKNEGGE-----------------CK-PEGLFRRL----PHL  305 (365)
T ss_dssp             CCHHH-HTTCCBSTHHHHHH--HHHHHHHHHHSSCCC-EEEETTE-----------------EE-ECSCCTTC----SSH
T ss_pred             CChHH-hcCCCCCccccHHH--HHHHHHHHHhCCCcc-ccCCCCc-----------------ee-echhcccc----CcH
Confidence            68999 77888999999999  999999999999999 4332211                 00 00000111    125


Q ss_pred             HHHHHHHHHHhhhcccccCC-HHHH
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-ASLL  104 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-~~el  104 (133)
                      ....+++..||..+|..|++ +.++
T Consensus       306 ~~~~~~~~~~l~~~p~~r~~~~~~l  330 (365)
T 3e7e_A          306 DMWNEFFHVMLNIPDCHHLPSLDLL  330 (365)
T ss_dssp             HHHHHHHHHHHCCCCTTCCCCHHHH
T ss_pred             HHHHHHHHHHcCCCCCCcchHHHHH
Confidence            66788999999999999965 4443

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.83  E-value=6.1e-10  Score=87.45  Aligned_cols=81  Identities=12%  Similarity=0.064  Sum_probs=58.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+ .++.++||||  +|+++++|++|.+|+ .+.....                       . +........+
T Consensus       244 ~aPE~-~~~-~~~~~sDi~s--lG~~l~~l~~g~~~~-~~~~~~~-----------------------~-~~~~~~~~~~  294 (681)
T 2pzi_A          244 QAPEI-VRT-GPTVATDIYT--VGRTLAALTLDLPTR-NGRYVDG-----------------------L-PEDDPVLKTY  294 (681)
T ss_dssp             SCTTH-HHH-CSCHHHHHHH--HHHHHHHHHSCCCEE-TTEECSS-----------------------C-CTTCHHHHHC
T ss_pred             cCHHH-HcC-CCCCceehhh--hHHHHHHHHhCCCCC-ccccccc-----------------------c-cccccccccC
Confidence            68998 543 3477899999  999999999998888 4321111                       0 0111123356


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      +.+.+++.+||..||.+||+..+.+.|+|+
T Consensus       295 ~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          295 DSYGRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             HHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             HHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence            788999999999999999987777777665

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.81  E-value=1.7e-09  Score=77.89  Aligned_cols=87  Identities=16%  Similarity=0.086  Sum_probs=56.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHH-HHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhh----hCCCCCcch
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMA-YLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIA----TNKKPEIKE   75 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~-~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   75 (133)
                      ||||+ +.+.. +.++||||  +++. .++++.|..|| .+....              ......+.    .........
T Consensus       244 ~aPE~-~~g~~-~~~~Diws--l~~~~~~~~~~g~~p~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~  304 (336)
T 2vuw_A          244 MDEDL-FTGDG-DYQFDIYR--LMKKENNNRWGEYHPY-SNVLWL--------------HYLTDKMLKQMTFKTKCNTPA  304 (336)
T ss_dssp             TCSGG-GCCCS-SHHHHHHH--HHHHHHTTCTTSCCTH-HHHHHH--------------HHHHHHHHHTCCCSSCCCSHH
T ss_pred             cChhh-hcCCC-ccceehhh--hhCCCCcccccccCCC-cchhhh--------------hHHHHhhhhhhccCcccchhh
Confidence            79999 65554 78999999  9777 55667787777 211000              00111111    111122222


Q ss_pred             hhhhcHHHHHHHHHHhhhcccccCCHHHHh-cCcccc
Q psy9738          76 KEKLSQIFQDFLDQCLEEEVETRASASLLL-KHPFLK  111 (133)
Q Consensus        76 ~~~~~~~~~~ll~~~L~~~p~~R~s~~ell-~h~~~~  111 (133)
                      ...+++++++|+.+||+.|     |+.++| +||||+
T Consensus       305 ~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          305 MKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             hhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            3567899999999999986     999999 999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	133
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-21
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-12
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-10
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	6e-09
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	8e-08
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-07
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-07
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-07
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-07
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-07
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	9e-07
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-06
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-06
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-06
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-06
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-06
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-06
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-06
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	8e-06
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-05
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-05
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-05
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-05
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-05
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-05
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-05
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	5e-05
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	5e-05
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	9e-05
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-04
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-04
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-04
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-04
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	0.001
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	0.001
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	0.001
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	0.003
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	0.003
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	0.004

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.7 bits (209), Expect = 2e-21
 Identities = 70/129 (54%), Positives = 85/129 (65%), Gaps = 19/129 (14%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE    RK YGPKV  +   +    ++MIEGEPP   NENPL               +
Sbjct: 183 MAPEV-VTRKAYGPKVDIWSLGIMA--IEMIEGEPPY-LNENPL---------------R 223

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
           ALYLIATN  PE++  EKLS IF+DFL++CL+ +VE R SA  LL+H FLKIA+PL+SLT
Sbjct: 224 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLT 283

Query: 121 PLIMAAKEA 129
           PLI AAKEA
Sbjct: 284 PLIAAAKEA 292

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 58.9 bits (142), Expect = 7e-12
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 21/133 (15%)

Query: 1   MAPEG--GHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC 58
           MAPE        QY  KV  +   ++   +++ E +PPL +N N +              
Sbjct: 178 MAPEVILAMDEGQYDGKVDVWSLGITC--IELAERKPPL-FNMNAM-------------- 220

Query: 59  RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLAS 118
             ALY IA N+ P ++     S+ F++F+D CL++  + R ++ +LLKH F+   RP   
Sbjct: 221 -SALYHIAQNESPALQSGH-WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTV 278

Query: 119 LTPLIMAAKEAAK 131
           +  LI   K+A +
Sbjct: 279 IMDLIQRTKDAVR 291

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (129), Expect = 3e-10
 Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 23/131 (17%)

Query: 1   MAPE----GGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFIL 56
           MAPE         + Y  K   +   +++  ++M E EPP     NP+            
Sbjct: 177 MAPEVVMCETSKDRPYDYKADVWSLGITL--IEMAEIEPPH-HELNPM------------ 221

Query: 57  SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL 116
              + L  IA ++ P + +  + S  F+DFL +CLE+ V+ R + S LL+HPF+ +    
Sbjct: 222 ---RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN- 277

Query: 117 ASLTPLIMAAK 127
             +  LI  AK
Sbjct: 278 KPIRELIAEAK 288

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 6e-09
 Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 20/111 (18%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE   + ++Y   V  +   + M  L+M   E P    +N                  
Sbjct: 180 MAPE--MYEEKYDESVDVYAFGMCM--LEMATSEYPYSECQNA----------------A 219

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
            +Y   T+        +      ++ ++ C+ +  + R S   LL H F +
Sbjct: 220 QIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 8e-08
 Identities = 18/111 (16%), Positives = 34/111 (30%), Gaps = 18/111 (16%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           +APE    R+ +   V  +   + +    M+ GE P     +  +               
Sbjct: 172 VAPELLKRREFHAEPVDVWSCGIVL--TAMLAGELPWDQPSDSCQ--------------- 214

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
             Y     KK  +   +K+       L + L E    R +   + K  +  
Sbjct: 215 -EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 264

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 1e-07
 Identities = 23/123 (18%), Positives = 35/123 (28%), Gaps = 14/123 (11%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNEN------------PLRPHF 48
            APE   + K Y   +  +     +A   M+   P                         
Sbjct: 179 RAPEIMLNSKGYTKSIDIWSVGCILAE--MLSNRPIFPGKHYLDQLNHILGILGSPSQED 236

Query: 49  LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHP 108
           L   + + +    L L   NK P  +          D LD+ L      R      L HP
Sbjct: 237 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 296

Query: 109 FLK 111
           +L+
Sbjct: 297 YLE 299

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 1e-07
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 14/123 (11%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENP------LRPHFLIPYLF 54
            APE   +  +Y   V  +     MA   MI G+     +++       ++     P  F
Sbjct: 185 RAPEVILNWMRYTQTVDIWSVGCIMAE--MITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 242

Query: 55  ILSCRQALYLIATNKKPEIKEKE------KLSQIFQDFLDQCLEEEVETRASASLLLKHP 108
           +   +           PE+++K+        S +  + L++ L  + E R +A   L HP
Sbjct: 243 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 302

Query: 109 FLK 111
           + +
Sbjct: 303 YFE 305

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 2e-07
 Identities = 17/120 (14%), Positives = 32/120 (26%), Gaps = 11/120 (9%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENP---------LRPHFLIP 51
            APE     + YG  V  +     +A   ++   P L  + +          L       
Sbjct: 167 RAPELLFGARMYGVGVDMWAVGCILAE--LLLRVPFLPGDSDLDQLTRIFETLGTPTEEQ 224

Query: 52  YLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
           +  + S    +   +    P             D +          R +A+  LK  +  
Sbjct: 225 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 284

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 3e-07
 Identities = 21/120 (17%), Positives = 36/120 (30%), Gaps = 16/120 (13%)

Query: 3   PEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPP-----------LIWNENPLRPHFLIP 51
                 +  Y   V  +      A   M   +P             I +   L      P
Sbjct: 183 APEVLLQSSYATPVDLWSVGCIFAE--MFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 240

Query: 52  YLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
               L  +      + + +P  K    + ++ +D L +CL      R SA   L HP+ +
Sbjct: 241 RDVALPRQA---FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (104), Expect = 7e-07
 Identities = 15/111 (13%), Positives = 34/111 (30%), Gaps = 27/111 (24%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
             PE   + + +G     +   + +    M+ G+ P   +E  +R               
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYD--MVCGDIPFEHDEEIIRGQVFFR--------- 224

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
                           +++S   Q  +  CL      R +   +  HP+++
Sbjct: 225 ----------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 44.1 bits (103), Expect = 9e-07
 Identities = 19/121 (15%), Positives = 34/121 (28%), Gaps = 12/121 (9%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENP----------LRPHFLI 50
            AP+     K+Y   +  +      A   M+ G P                    P+   
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAE--MVNGTPLFPGVSEADQLMRIFRILGTPNSKN 224

Query: 51  PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
                   +           P     + L +   D L + L+ +   R +A   L+H + 
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284

Query: 111 K 111
           K
Sbjct: 285 K 285

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.1 bits (101), Expect = 2e-06
 Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 18/111 (16%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           +APE    +K Y   V  +   V      ++ G PP  ++EN  +    I          
Sbjct: 176 VAPEV-LAQKPYSKAVDCWSIGVIAYI--LLCGYPPF-YDENDAKLFEQI---------- 221

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
               +    + +    + +S   +DF+   +E++ E R +    L+HP++ 
Sbjct: 222 ----LKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 268

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 43.1 bits (101), Expect = 2e-06
 Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 18/111 (16%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
            APE     K  G     +   V      ++ G  P    EN       +          
Sbjct: 192 AAPEV-AEGKPVGYYTDMWSVGVLSYI--LLSGLSPF-GGENDDETLRNV---------- 237

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
                + +   +      +S+  +DF+ + L  +  TR +    L+HP+L 
Sbjct: 238 ----KSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 284

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 2e-06
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 1/84 (1%)

Query: 28  LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 87
                  PP           + +     ++  + L  I     P++      S  FQDF+
Sbjct: 220 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSG-VFSLEFQDFV 278

Query: 88  DQCLEEEVETRASASLLLKHPFLK 111
           ++CL +    RA    L+ H F+K
Sbjct: 279 NKCLIKNPAERADLKQLMVHAFIK 302

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 42.7 bits (100), Expect = 3e-06
 Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 22/116 (18%)

Query: 1   MAPE-----GGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFI 55
           +APE        +   YG +V  +   V M    ++ G PP  W+   +    +I     
Sbjct: 176 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT--LLAGSPPF-WHRKQMLMLRMI----- 227

Query: 56  LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
                    ++ N +    E +  S   +D + + L  + + R +A   L HPF +
Sbjct: 228 ---------MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 274

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 3e-06
 Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 22/111 (19%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           + PE     + +  KV  +     + Y + + G+PP          +  I          
Sbjct: 171 LPPEM-IEGRMHDEKVDLWS-LGVLCY-EFLVGKPPF-EANTYQETYKRI---------- 216

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
                    + E    + +++  +D + + L+     R     +L+HP++ 
Sbjct: 217 --------SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 259

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.7 bits (99), Expect = 3e-06
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 2/89 (2%)

Query: 25  MAYLKMIEGEPP--LIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQI 82
           +A +  + GE P  L+ N    R  F    L     +   + +      + K  +  ++ 
Sbjct: 244 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKE 303

Query: 83  FQDFLDQCLEEEVETRASASLLLKHPFLK 111
             DFL   L+ +   RA A  L+ HP+LK
Sbjct: 304 ISDFLSPMLQLDPRKRADAGGLVNHPWLK 332

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 4e-06
 Identities = 21/126 (16%), Positives = 34/126 (26%), Gaps = 13/126 (10%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
             P+     K Y   +  +      A   +     PL    +       I  L      +
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAE--LANAGRPLFPGNDVDDQLKRIFRLLGTPTEE 225

Query: 61  AL-----------YLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF 109
                        Y +       +    KL+   +D L   L+     R SA   L+HP+
Sbjct: 226 QWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285

Query: 110 LKIARP 115
                P
Sbjct: 286 FSDFCP 291

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 8e-06
 Identities = 20/123 (16%), Positives = 38/123 (30%), Gaps = 14/123 (11%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPP-----------LIWNENPLRPHFL 49
            APE   +   Y   V  +   V     +++ G              LI          L
Sbjct: 185 RAPEIMLNWMHYNQTVDIWS--VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 242

Query: 50  IPYLFILSCRQALYLIATNKKPEIKEK-EKLSQIFQDFLDQCLEEEVETRASASLLLKHP 108
           +  +   S R  +  +    K          + +  D L++ L  + + R +A+  L H 
Sbjct: 243 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 302

Query: 109 FLK 111
           +  
Sbjct: 303 YFA 305

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 1e-05
 Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 18/111 (16%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           +APE   + +  G +   +   V      ++ G  P + +                    
Sbjct: 183 VAPEI-VNYEPLGLEADMWSIGVITYI--LLSGASPFLGDTKQ---------------ET 224

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
              + A N + E +     S + +DF+ + L ++ + R +    L+HP++K
Sbjct: 225 LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 41.0 bits (95), Expect = 1e-05
 Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 21/130 (16%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLI------PYLF 54
             PE     + Y   +  +     +A   MI  + P     +       I        L+
Sbjct: 196 KGPELLVDYQMYDYSLDMWSLGCMLAS--MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 253

Query: 55  ILSCRQALYLIAT-------------NKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA 101
               +  + L                 +    + +  +S    DFLD+ L  + ++R +A
Sbjct: 254 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 313

Query: 102 SLLLKHPFLK 111
              ++HP+  
Sbjct: 314 REAMEHPYFY 323

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (95), Expect = 1e-05
 Identities = 17/110 (15%), Positives = 34/110 (30%), Gaps = 21/110 (19%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           M+PE   +R  Y  K   +     +   ++    PP                      ++
Sbjct: 181 MSPEQ-MNRMSYNEKSDIWSLGCLL--YELCALMPPFTAFSQ----------------KE 221

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
               I   K   I  +   S    + + + L  +   R S   +L++P +
Sbjct: 222 LAGKIREGKFRRIPYR--YSDELNEIITRMLNLKDYHRPSVEEILENPLI 269

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 2e-05
 Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 21/107 (19%)

Query: 7   HHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIA 66
           H           +     +    ++ G  P                 F+    Q +    
Sbjct: 175 HQHDVVSTATDMWSLGTLVYV--LLSGINP-----------------FLAETNQQIIENI 215

Query: 67  TNKKPEIKEK--EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
            N +    E+  +++S    DF+D+ L +E ++R +AS  L+HP+LK
Sbjct: 216 MNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK 262

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 2e-05
 Identities = 22/130 (16%), Positives = 39/130 (30%), Gaps = 13/130 (10%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWN----------ENPLRPHFLI 50
            APE     K Y   V  +   +   + +M+        +               P  ++
Sbjct: 169 RAPEILLGCKYYSTAVDIWS--LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226

Query: 51  PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
                             ++   K    L +  +  L Q L  +   R SA   L HPF 
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

Query: 111 K-IARPLASL 119
           + + +P+  L
Sbjct: 287 QDVTKPVPHL 296

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 2e-05
 Identities = 19/113 (16%), Positives = 39/113 (34%), Gaps = 18/113 (15%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           +APE     ++Y      +   V M    ++ G PP   N               L+   
Sbjct: 180 VAPEV-LGPEKYDKSCDMWSLGVIMYI--LLCGYPPFYSNHG-------------LAISP 223

Query: 61  ALYLIATNKKPEIKEKE--KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
            +       + E    E  ++S+  +  +   L+ E   R + +  + HP++ 
Sbjct: 224 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 276

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 2e-05
 Identities = 23/124 (18%), Positives = 37/124 (29%), Gaps = 15/124 (12%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPP-----------LIWNENPLRPHFL 49
             PE     + YGP +  +G    MA   M    P            LI          +
Sbjct: 188 RPPELLLGERDYGPPIDLWGAGCIMAE--MWTRSPIMQGNTEQHQLALISQLCGSITPEV 245

Query: 50  IPYLFILSCRQALYLIATNKK--PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH 107
            P +      + L L+   K+   +  +         D +D+ L  +   R  +   L H
Sbjct: 246 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305

Query: 108 PFLK 111
            F  
Sbjct: 306 DFFW 309

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 5e-05
 Identities = 15/109 (13%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 18  YFGHWVSMAYLKMIEGE----PPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEI 73
           + G      + K+IE      P  +    P   +++                 +    + 
Sbjct: 218 FPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS 277

Query: 74  KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPL 122
           +  +  +   +D L + L  +   R S    L+HP++ +    A +   
Sbjct: 278 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 326

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 5e-05
 Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 14/122 (11%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
            APE       Y   +  +     +A   ++ G+P     ++ +     I  +     R+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAE--LLLGQPIF-PGDSGVDQLVEIIKVLGTPTRE 245

Query: 61  ALYLIATN----KKPEIKEKE-------KLSQIFQDFLDQCLEEEVETRASASLLLKHPF 109
            +  +  N    K P+IK          +          + LE     R +      H F
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305

Query: 110 LK 111
             
Sbjct: 306 FD 307

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 38.5 bits (89), Expect = 9e-05
 Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 18/111 (16%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
            APE    R+  G     +   V      ++ G  P    E+ L     +          
Sbjct: 195 AAPEI-VDREPVGFYTDMWAIGVLGYV--LLSGLSPF-AGEDDLETLQNV---------- 240

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
                  + + +      +S   +DF+   L++E   R +    L+HP+LK
Sbjct: 241 ----KRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 287

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.8 bits (87), Expect = 1e-04
 Identities = 15/114 (13%), Positives = 36/114 (31%), Gaps = 18/114 (15%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           ++PE          +   +     +    ++ GEPP    ++P+                
Sbjct: 181 LSPEQ-ARGDSVDARSDVYSLGCVLYE--VLTGEPPF-TGDSPVS--------------V 222

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR 114
           A   +  +  P     E LS      + + L +  E R   +  ++   +++  
Sbjct: 223 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 276

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 1e-04
 Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 26/115 (22%)

Query: 2   APEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQA 61
                     YG  V ++G  V M    M+ G  P  +N++                 + 
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYE--MMCGRLPF-YNQDH----------------ER 212

Query: 62  LYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETR-----ASASLLLKHPFLK 111
           L+ +   ++        LS   +  L   L+++ + R     + A  +++H F  
Sbjct: 213 LFELILMEEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.2 bits (83), Expect = 6e-04
 Identities = 17/116 (14%), Positives = 41/116 (35%), Gaps = 27/116 (23%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           +APE     K Y   + ++   + +   +M+ G  P  ++ N ++ +  I          
Sbjct: 168 IAPEV-VSTKPYNKSIDWWSFGILI--YEMLAGYTPF-YDSNTMKTYEKI---------- 213

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETR-----ASASLLLKHPFLK 111
                      E++     ++  +D L + +  ++  R          +  HP+ K
Sbjct: 214 --------LNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFK 261

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 35.9 bits (82), Expect = 8e-04
 Identities = 16/116 (13%), Positives = 34/116 (29%), Gaps = 23/116 (19%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MAPE       Y     +F     +    ++ G  P   ++                 + 
Sbjct: 172 MAPEVLQKGVAYDSSADWFSLGCMLFK--LLRGHSPFRQHKT----------------KD 213

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLK 111
              +        ++  +  S   +  L+  L+ +V  R       A  + + PF +
Sbjct: 214 KHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 269

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 0.001
 Identities = 20/112 (17%), Positives = 36/112 (32%), Gaps = 23/112 (20%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           +APE     ++Y   V ++   V +    M+ G+ P                 F     +
Sbjct: 170 IAPEI-LLGQKYNHSVDWWSFGVLLYE--MLIGQSP-----------------FHGQDEE 209

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA-SLLLKHPFLK 111
            L+       P       L +  +D L +    E E R      + +HP  +
Sbjct: 210 ELFHSIRMDNPFYPRW--LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFR 259

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 0.001
 Identities = 16/117 (13%), Positives = 33/117 (28%), Gaps = 28/117 (23%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           ++PE     K        +     +   +++ G PP                 F      
Sbjct: 177 VSPEL-LTEKSACKSSDLWALGCII--YQLVAGLPP-----------------FRAGNEY 216

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA------SLLLKHPFLK 111
            ++      + +  EK       +D +++ L  +   R           L  HPF +
Sbjct: 217 LIFQKIIKLEYDFPEK--FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 0.001
 Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 20/107 (18%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
             PE      ++  K   +   V M  +    G+ P     N                 +
Sbjct: 168 SPPEV-LMYSKFSSKSDIWAFGVLMWEI-YSLGKMPYERFTNS----------------E 209

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH 107
               IA   +         S+     +  C  E+ + R +  +LL +
Sbjct: 210 TAEHIAQGLRLYRPHL--ASEKVYTIMYSCWHEKADERPTFKILLSN 254

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (77), Expect = 0.003
 Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 21/115 (18%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
           MA E   HR  Y  +   + + V++  L M  G  P  ++  P                +
Sbjct: 180 MALESILHRI-YTHQSDVWSYGVTVWEL-MTFGSKP--YDGIPAS--------------E 221

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 115
              ++   ++         +      + +C   + ++R     L+   F K+AR 
Sbjct: 222 ISSILEKGERLPQPPI--CTIDVYMIMVKCWMIDADSRPKFRELIIE-FSKMARD 273

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.003
 Identities = 19/107 (17%), Positives = 34/107 (31%), Gaps = 20/107 (18%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
            +PE      +Y  K   +   V + +    EG+ P     N                 +
Sbjct: 169 ASPEV-FSFSRYSSKSDVWSFGV-LMWEVFSEGKIPYENRSNS----------------E 210

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH 107
            +  I+T  +         S      ++ C +E  E R + S LL+ 
Sbjct: 211 VVEDISTGFRLYKPRL--ASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (76), Expect = 0.004
 Identities = 12/107 (11%), Positives = 28/107 (26%), Gaps = 20/107 (18%)

Query: 1   MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
            APE     K++  K   +   + +  +    G  P                   +  + 
Sbjct: 167 TAPEA-LREKKFSTKSDVWSFGILLWEI-YSFGRVPY----------------PRIPLKD 208

Query: 61  ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH 107
            +  +    K +  +         + +  C   +   R S   L + 
Sbjct: 209 VVPRVEKGYKMDAPDG--CPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	133
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.9
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.86
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.84
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.84
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.83
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.82
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.82
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.82
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.8
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.79
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.79
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.79
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.78
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.77
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.77
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.77
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.77
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.76
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.76
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.76
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.75
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.75
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.74
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.73
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.73
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.72
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.71
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.71
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.7
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.7
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.69
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.68
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.67
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.67
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.67
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.66
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.66
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.66
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.65
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.65
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.64
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.63
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.63
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.63
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.62
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.61
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.61
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.59
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.59
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.58
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.58
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.57
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.56
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.56
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.55
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.55
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.52
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.51
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.48
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.46
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.3
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.29

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.2e-24  Score=154.27  Aligned_cols=110  Identities=65%  Similarity=1.012  Sum_probs=93.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|..|| .+.+...               ....+.....+.+..+..++
T Consensus       183 ~aPE~-~~~~~~~~~~DiwS--lGvilyemltG~~Pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~s  243 (293)
T d1yhwa1         183 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMIEGEPPY-LNENPLR---------------ALYLIATNGTPELQNPEKLS  243 (293)
T ss_dssp             CCHHH-HSSSCBCTHHHHHH--HHHHHHHHHHSSCTT-TTSCHHH---------------HHHHHHHHCSCCCSSGGGSC
T ss_pred             cChhh-hcCCCCCchhceeh--HhHHHHHHhhCCCCC-CCCCHHH---------------HHHHHHhCCCCCCCCcccCC
Confidence            79999 88889999999999  999999999999999 6544333               44445555555555567789


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHH
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEA  129 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~  129 (133)
                      +.+++|+.+||..||.+|||+.|+|+||||+.....+++.|++..++++
T Consensus       244 ~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~~~~~~~l~p~~~~~~ea  292 (293)
T d1yhwa1         244 AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEA  292 (293)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGGCCCGGGGHHHHHHHHHC
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCCCCCcCCCCCcccccC
Confidence            9999999999999999999999999999999988999999999888763

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.6e-22  Score=142.95  Aligned_cols=106  Identities=34%  Similarity=0.600  Sum_probs=83.6

Q ss_pred             CCCcccc----CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchh
Q psy9738           1 MAPEGGH----HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEK   76 (133)
Q Consensus         1 maPE~~~----~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (133)
                      ||||++.    ....|+.++||||  +||++|+|++|..|| .+.+...               ....+.....+.+..+
T Consensus       177 ~APE~l~~~~~~~~~y~~k~DiwS--lGvilyemltg~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~~  238 (288)
T d2jfla1         177 MAPEVVMCETSKDRPYDYKADVWS--LGITLIEMAEIEPPH-HELNPMR---------------VLLKIAKSEPPTLAQP  238 (288)
T ss_dssp             CCHHHHTTCSTTTSSTTTHHHHHH--HHHHHHHHHHSSCTT-TTSCGGG---------------HHHHHHHSCCCCCSSG
T ss_pred             CCHHHHhhcccCCCCCChhhhHHH--HHHHHHHHhhCCCCC-CCCCHHH---------------HHHHHHcCCCCCCCcc
Confidence            7999832    3556889999999  999999999999999 6655544               5555666665555556


Q ss_pred             hhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHH
Q psy9738          77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMA  125 (133)
Q Consensus        77 ~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~  125 (133)
                      ..+++++++|+.+||+.||.+|||++|+++||||+... ...+..++.+
T Consensus       239 ~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~~-~~p~~~li~e  286 (288)
T d2jfla1         239 SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS-NKPIRELIAE  286 (288)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCCC-CHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC-CCCcHHHHhc
Confidence            78899999999999999999999999999999997432 2334555543

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=9.2e-22  Score=140.22  Aligned_cols=111  Identities=35%  Similarity=0.636  Sum_probs=88.0

Q ss_pred             CCCccccC---CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhh
Q psy9738           1 MAPEGGHH---RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKE   77 (133)
Q Consensus         1 maPE~~~~---~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (133)
                      ||||+ +.   .+.|+.++||||  +||++|+|++|..|| .+.+...               .+..+.....+.+. +.
T Consensus       178 ~APE~-~~~~~~~~y~~~~DiwS--lGvilyel~~g~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~-~~  237 (309)
T d1u5ra_         178 MAPEV-ILAMDEGQYDGKVDVWS--LGITCIELAERKPPL-FNMNAMS---------------ALYHIAQNESPALQ-SG  237 (309)
T ss_dssp             CCHHH-HTTTTSCCBCTHHHHHH--HHHHHHHHHHSSCTT-TTSCHHH---------------HHHHHHHSCCCCCS-CT
T ss_pred             cCHHH-HhccCCCCcCchhhhhh--HHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHhCCCCCCC-CC
Confidence            79999 53   356899999999  999999999999999 5543322               44455555444332 34


Q ss_pred             hhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChhHHHHHHHHHhc
Q psy9738          78 KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK  131 (133)
Q Consensus        78 ~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~~~~~~~~~~~~  131 (133)
                      ..++.+++|+.+||..||.+|||++++|+||||........+.+++...++.++
T Consensus       238 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~~~~~~~~~~~~~~~~~~  291 (309)
T d1u5ra_         238 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVR  291 (309)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCTTHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCCCCchhhHHHHHHHHHHHH
Confidence            578999999999999999999999999999999988777777888877766554

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=6.8e-22  Score=138.07  Aligned_cols=91  Identities=14%  Similarity=0.272  Sum_probs=74.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|+.|| .+.+...               .... .....+.+  +..++
T Consensus       171 ~APE~-~~~~~~~~~~DiwS--lGvilyell~G~~Pf-~~~~~~~---------------~~~~-i~~~~~~~--p~~~s  228 (263)
T d2j4za1         171 LPPEM-IEGRMHDEKVDLWS--LGVLCYEFLVGKPPF-EANTYQE---------------TYKR-ISRVEFTF--PDFVT  228 (263)
T ss_dssp             CCHHH-HTTCCCCTTHHHHH--HHHHHHHHHHSSCTT-CCSSHHH---------------HHHH-HHTTCCCC--CTTSC
T ss_pred             cCHHH-HcCCCCCchhhhhh--HhHHHHHHhcCCCCC-CCCCHHH---------------HHHH-HHcCCCCC--CccCC
Confidence            79999 88888999999999  999999999999999 5443222               2222 23333444  45689


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      +.+++|+.+||..||.+|||++|+|+||||+..
T Consensus       229 ~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~~  261 (263)
T d2j4za1         229 EGARDLISRLLKHNPSQRPMLREVLEHPWITAN  261 (263)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHHH
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHcCcCcCCc
Confidence            999999999999999999999999999999753

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=3.5e-21  Score=134.85  Aligned_cols=91  Identities=22%  Similarity=0.343  Sum_probs=70.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+ .|+.++||||  +||++|+|++|+.|| .+.....               .+.............+...+
T Consensus       180 ~aPE~-~~~-~~~~~~DIwS--lGvilyel~~g~~Pf-~~~~~~~---------------~~~~~i~~~~~~~~~~~~~~  239 (270)
T d1t4ha_         180 MAPEM-YEE-KYDESVDVYA--FGMCMLEMATSEYPY-SECQNAA---------------QIYRRVTSGVKPASFDKVAI  239 (270)
T ss_dssp             CCGGG-GGT-CCCTHHHHHH--HHHHHHHHHHSSCTT-TTCSSHH---------------HHHHHHTTTCCCGGGGGCCC
T ss_pred             cCHHH-hCC-CCCCcCchhh--HHHHHHHHHHCCCCC-CCcccHH---------------HHHHHHHcCCCCcccCccCC
Confidence            79999 654 6999999999  999999999999999 5433222               23333333322222245578


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCcccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFLK  111 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~  111 (133)
                      +++++|+.+||..||++|||++|+|+||||+
T Consensus       240 ~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         240 PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            8999999999999999999999999999996

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.1e-21  Score=135.86  Aligned_cols=89  Identities=19%  Similarity=0.261  Sum_probs=73.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|+.|| .+.+...               ....+.....+.+  +..++
T Consensus       181 ~APE~-l~~~~~~~~~DIwS--lGvilyel~tg~~Pf-~~~~~~~---------------~~~~i~~~~~~~~--~~~~s  239 (269)
T d2java1         181 MSPEQ-MNRMSYNEKSDIWS--LGCLLYELCALMPPF-TAFSQKE---------------LAGKIREGKFRRI--PYRYS  239 (269)
T ss_dssp             CCHHH-HTTCCCCHHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH---------------HHHHHHHTCCCCC--CTTSC
T ss_pred             CCHHH-HcCCCCChHHHHHh--hCHHHHHHhhCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CcccC
Confidence            79999 88889999999999  999999999999999 5443222               3334444444444  45688


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcCccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKHPFL  110 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h~~~  110 (133)
                      +++.+|+.+||..||.+|||++|+++|||+
T Consensus       240 ~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         240 DELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            999999999999999999999999999996

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.2e-20  Score=132.27  Aligned_cols=94  Identities=19%  Similarity=0.229  Sum_probs=72.6

Q ss_pred             CCCccccCCCCC-CCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQY-GPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~-~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..| +.++||||  +||++|+|++|+.|| .......               ..................+
T Consensus       172 ~APE~-~~~~~~~~~~~DiwS--lGvilyeml~G~~pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~  232 (271)
T d1nvra_         172 VAPEL-LKRREFHAEPVDVWS--CGIVLTAMLAGELPW-DQPSDSC---------------QEYSDWKEKKTYLNPWKKI  232 (271)
T ss_dssp             SCTHH-HHCSSBCHHHHHHHH--HHHHHHHHHHSSCSC-SSSSTTS---------------HHHHHHHTTCTTSTTGGGS
T ss_pred             cCHhH-hcCCCCCCCceeeeH--hHHHHHHHHhCCCCC-CCCChHH---------------HHHHHHhcCCCCCCccccC
Confidence            79999 666665 57899999  999999999999999 5444333               2222333333333224567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ++.+.+|+.+||..||.+|||++++++||||+..
T Consensus       233 s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  266 (271)
T d1nvra_         233 DSAPLALLHKILVENPSARITIPDIKKDRWYNKP  266 (271)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence            8999999999999999999999999999999753

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.82  E-value=5.5e-21  Score=136.03  Aligned_cols=95  Identities=22%  Similarity=0.384  Sum_probs=74.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|..|| .+.+...               ....+..... ...+....+
T Consensus       176 ~APE~-~~~~~~~~~~DiwS--lGvilyell~g~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  236 (307)
T d1a06a_         176 VAPEV-LAQKPYSKAVDCWS--IGVIAYILLCGYPPF-YDENDAK---------------LFEQILKAEYEFDSPYWDDI  236 (307)
T ss_dssp             SCHHH-HTTCCCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH---------------HHHHHHTTCCCCCTTTTTTS
T ss_pred             cCcHH-HcCCCCCcHHHhhh--hhHHHHHHHhCCCCC-CCCCHHH---------------HHHHHhccCCCCCCccccCC
Confidence            79999 88889999999999  999999999999999 5443222               2333333221 222223568


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ++.+.+|+.+||..||.+|||++|+++||||+...
T Consensus       237 s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~  271 (307)
T d1a06a_         237 SDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDT  271 (307)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSSC
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence            89999999999999999999999999999998643

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=8.1e-21  Score=134.14  Aligned_cols=95  Identities=18%  Similarity=0.316  Sum_probs=73.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc--hhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK--EKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   78 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|..|| .+.+...               ....+.... ..+.  .+..
T Consensus       183 ~APE~-~~~~~~~~~~DiwS--lGvilyell~g~~Pf-~~~~~~~---------------~~~~i~~~~-~~~~~~~~~~  242 (293)
T d1jksa_         183 VAPEI-VNYEPLGLEADMWS--IGVITYILLSGASPF-LGDTKQE---------------TLANVSAVN-YEFEDEYFSN  242 (293)
T ss_dssp             CCHHH-HTTCCBCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHTTC-CCCCHHHHTT
T ss_pred             cCHHH-HcCCCCCCcccchh--hhHHHHHHHcCCCCC-CCCCHHH---------------HHHHHHhcC-CCCCchhcCC
Confidence            79999 88888999999999  999999999999999 5543322               233333322 2222  2356


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                      .++.+++|+.+||..||.+|||++++++||||+....
T Consensus       243 ~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~  279 (293)
T d1jksa_         243 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT  279 (293)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC---
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCh
Confidence            7899999999999999999999999999999986443

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2e-20  Score=132.39  Aligned_cols=94  Identities=23%  Similarity=0.325  Sum_probs=70.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh----C--------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT----N--------   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--------   68 (133)
                      ||||+ +.+..|+.++||||  +||++++|++|..|| .+.+...               .+..+..    .        
T Consensus       182 ~APE~-~~~~~y~~~~DiwS--lG~il~ell~g~~pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  242 (305)
T d1blxa_         182 RAPEV-LLQSSYATPVDLWS--VGCIFAEMFRRKPLF-RGSSDVD---------------QLGKILDVIGLPGEEDWPRD  242 (305)
T ss_dssp             CCHHH-HTTCCCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH---------------HHHHHHHHHCCCCGGGSCTT
T ss_pred             cCcch-hcCCCCChhehhhc--hHHHHHHHHHCCCCC-CCCCHHH---------------HHHHHHHhhCCCchhccccc
Confidence            79999 88899999999999  999999999999999 5543221               1111110    0        


Q ss_pred             -----------CCCCc-chhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          69 -----------KKPEI-KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        69 -----------~~~~~-~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                                 ..... ......++.+.+|+.+||..||.+|||+.|+|+||||+.-
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i  299 (305)
T d1blxa_         243 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  299 (305)
T ss_dssp             CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             ccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCc
Confidence                       00000 0013467899999999999999999999999999999864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.79  E-value=6.2e-20  Score=133.28  Aligned_cols=94  Identities=19%  Similarity=0.388  Sum_probs=72.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||++..+..|+.++||||  +||++|+|++|..|| .+.+... .            ...........+.+  +..++
T Consensus       172 ~APE~~~~~~~~~~~~DiwS--lGvilyemltG~~Pf-~~~~~~~-~------------~~~~~~~~~~~~~~--~~~~s  233 (364)
T d1omwa3         172 MAPEVLQKGVAYDSSADWFS--LGCMLFKLLRGHSPF-RQHKTKD-K------------HEIDRMTLTMAVEL--PDSFS  233 (364)
T ss_dssp             CCHHHHSTTCCCCTHHHHHH--HHHHHHHHHHSSCSS-CSSCSSC-H------------HHHHHHSSSCCCCC--CSSSC
T ss_pred             chhHHhhcCCCCCcccchhH--HHHHHHHHHhCCCCC-CCCCHHH-H------------HHHHHhcccCCCCC--CCCCC
Confidence            79999334667999999999  999999999999999 5544333 0            01122222223333  45689


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~  112 (133)
                      +.+++|+.+||..||.+|+|     ++++++||||+.
T Consensus       234 ~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~  270 (364)
T d1omwa3         234 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS  270 (364)
T ss_dssp             HHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccC
Confidence            99999999999999999999     799999999975

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.79  E-value=3.2e-20  Score=134.20  Aligned_cols=94  Identities=22%  Similarity=0.255  Sum_probs=74.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|..|| .+.+...               ....+..... ........+
T Consensus       192 ~aPEv-~~~~~~~~~~DiwS--lGvilyell~G~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  252 (350)
T d1koaa2         192 AAPEV-AEGKPVGYYTDMWS--VGVLSYILLSGLSPF-GGENDDE---------------TLRNVKSCDWNMDDSAFSGI  252 (350)
T ss_dssp             CCHHH-HHTCCBCHHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHTCCCSCCGGGGGC
T ss_pred             cCHHH-HcCCCCChhHhhhh--hhHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhCCCCCCcccccCC
Confidence            79999 88888999999999  999999999999999 5543322               3333333221 222223567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ++.+++|+.+||..||.+|||++++|+||||+..
T Consensus       253 s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~  286 (350)
T d1koaa2         253 SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG  286 (350)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            8999999999999999999999999999999754

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.78  E-value=4.6e-20  Score=133.43  Aligned_cols=94  Identities=22%  Similarity=0.284  Sum_probs=74.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|..|| .+.+...               .+..+..... +.......+
T Consensus       195 ~aPE~-~~~~~~~~~~DiwS--lGvilyelltG~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  255 (352)
T d1koba_         195 AAPEI-VDREPVGFYTDMWA--IGVLGYVLLSGLSPF-AGEDDLE---------------TLQNVKRCDWEFDEDAFSSV  255 (352)
T ss_dssp             CCHHH-HTTCCBCHHHHHHH--HHHHHHHHHHSCCSS-CCSSHHH---------------HHHHHHHCCCCCCSSTTTTS
T ss_pred             cCHHH-HcCCCCCCccchHH--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhCCCCCCcccccCC
Confidence            79999 88889999999999  999999999999999 5544322               3333333221 222123568


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ++.+.+|+.+||..||.+|||+.|+|+||||+..
T Consensus       256 s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         256 SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence            8999999999999999999999999999999864

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.7e-19  Score=129.77  Aligned_cols=90  Identities=22%  Similarity=0.425  Sum_probs=73.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +||++|+|++|.+|| .+.+..                .+........+.+  +..++
T Consensus       172 ~aPE~-~~~~~y~~~~DiwS--lGvilyeml~G~~pf-~~~~~~----------------~~~~~i~~~~~~~--p~~~s  229 (337)
T d1o6la_         172 LAPEV-LEDNDYGRAVDWWG--LGVVMYEMMCGRLPF-YNQDHE----------------RLFELILMEEIRF--PRTLS  229 (337)
T ss_dssp             CCGGG-GSSSCBCTTHHHHH--HHHHHHHHHHSSCSS-CCSSHH----------------HHHHHHHHCCCCC--CTTSC
T ss_pred             hhhhh-ccCCCCChhhcccc--hhhHHHHHHHCCCCC-CCcCHH----------------HHHHHHhcCCCCC--CccCC
Confidence            79999 88899999999999  999999999999999 654432                2222233333444  56789


Q ss_pred             HHHHHHHHHHhhhcccccCC-----HHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s-----~~ell~h~~~~~  112 (133)
                      +.+++|+.+||+.||.+|++     ++++++||||+.
T Consensus       230 ~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~  266 (337)
T d1o6la_         230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             HHHHHHHHhhccCCchhhcccccccHHHHHcCccccc
Confidence            99999999999999999994     899999999975

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=8.7e-20  Score=130.39  Aligned_cols=108  Identities=21%  Similarity=0.358  Sum_probs=72.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCccc-chhh--------------------------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFL-IPYL--------------------------   53 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~-~~~~--------------------------   53 (133)
                      ||||+ +.+..|+.++||||  +||++++|++|+.|| .+.+....... +...                          
T Consensus       170 ~APEv-l~~~~y~~~~DiWS--lGvil~ell~G~~Pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (322)
T d1s9ja_         170 MSPER-LQGTHYSVQSDIWS--MGLSLVEMAVGRYPI-PPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSR  245 (322)
T ss_dssp             CCHHH-HHCSCCCTTHHHHH--HHHHHHHHHHSSCCS-SCCCTTHHHHHC------------------------------
T ss_pred             cCchH-HcCCCCCcHHHHHH--HHHHHHHHHHCCCCC-CCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccc
Confidence            79999 77889999999999  999999999999999 55432210000 0000                          


Q ss_pred             HHhhHHHHHHHhhhCCCCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          54 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ......+....+....++.++ ....+.++.+|+.+||..||.+|||++|+|+||||+..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~  304 (322)
T d1s9ja_         246 PPMAIFELLDYIVNEPPPKLP-SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  304 (322)
T ss_dssp             CCCCHHHHHHHHHTSCCCCCC-BTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             cchhHHHHHhhhhccCCccCc-cccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence            000000011111122222221 13467899999999999999999999999999999753

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=3.4e-20  Score=130.85  Aligned_cols=91  Identities=19%  Similarity=0.288  Sum_probs=73.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|..|| .+.+...               ....+. ...+.+  +..++
T Consensus       177 ~APE~-~~~~~~~~~~DiwS--lGvilyell~g~~Pf-~~~~~~~---------------~~~~i~-~~~~~~--p~~~s  234 (288)
T d1uu3a_         177 VSPEL-LTEKSACKSSDLWA--LGCIIYQLVAGLPPF-RAGNEYL---------------IFQKII-KLEYDF--PEKFF  234 (288)
T ss_dssp             CCHHH-HHTCCCCHHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHH-TTCCCC--CTTCC
T ss_pred             cCcee-eccCCCCcccceeh--hhHHHHHHhhCCCCC-CCcCHHH---------------HHHHHH-cCCCCC--CccCC
Confidence            79999 88889999999999  999999999999999 5543322               233333 333444  45689


Q ss_pred             HHHHHHHHHHhhhcccccCCHHH------HhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASL------LLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~e------ll~h~~~~~~  113 (133)
                      +.+++|+.+||..||.+|+|++|      +++||||+..
T Consensus       235 ~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i  273 (288)
T d1uu3a_         235 PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  273 (288)
T ss_dssp             HHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence            99999999999999999999987      5789999764

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=1.1e-19  Score=131.31  Aligned_cols=91  Identities=21%  Similarity=0.412  Sum_probs=73.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|..|| .+.+...               ....+... .+.+  +..++
T Consensus       205 ~APE~-~~~~~~~~~~DiwS--lGvilyemltG~~Pf-~~~~~~~---------------~~~~i~~~-~~~~--p~~~s  262 (350)
T d1rdqe_         205 LAPEI-ILSKGYNKAVDWWA--LGVLIYEMAAGYPPF-FADQPIQ---------------IYEKIVSG-KVRF--PSHFS  262 (350)
T ss_dssp             CCHHH-HTTCCBCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHC-CCCC--CTTCC
T ss_pred             CCHHH-HcCCCCCccccccc--hhHHHHHHHhCCCCC-CCcCHHH---------------HHHHHhcC-CCCC--CccCC
Confidence            79999 88889999999999  999999999999999 6544322               33333333 2333  45689


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCcccccC
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  113 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~~  113 (133)
                      +++.+|+.+||..||.+|+     +++++++||||+..
T Consensus       263 ~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence            9999999999999999995     89999999999753

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.76  E-value=1.3e-19  Score=129.28  Aligned_cols=90  Identities=18%  Similarity=0.402  Sum_probs=73.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|+.|| .+.+...               ....+... ...+  +..++
T Consensus       168 ~APE~-l~~~~y~~~~DiwS--lGvilyemltG~~Pf-~~~~~~~---------------~~~~i~~~-~~~~--p~~~s  225 (316)
T d1fota_         168 IAPEV-VSTKPYNKSIDWWS--FGILIYEMLAGYTPF-YDSNTMK---------------TYEKILNA-ELRF--PPFFN  225 (316)
T ss_dssp             CCHHH-HTTCCBCTTHHHHH--HHHHHHHHHHSSCTT-CCSSHHH---------------HHHHHHHC-CCCC--CTTSC
T ss_pred             cCHHH-HcCCCCCchhhccc--cchhHHHHHhCCCCC-CCcCHHH---------------HHHHHHcC-CCCC--CCCCC
Confidence            79999 88889999999999  999999999999999 6544322               33333333 2333  45678


Q ss_pred             HHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      +++++++.+||..||.+|+     |++++++||||+.
T Consensus       226 ~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~  262 (316)
T d1fota_         226 EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE  262 (316)
T ss_dssp             HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred             HHHHHHHHHHhhhCHHhccccchhhHHHHHcCccccc
Confidence            9999999999999999996     8999999999976

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.3e-19  Score=128.01  Aligned_cols=95  Identities=20%  Similarity=0.168  Sum_probs=69.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh---CC--------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT---NK--------   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------   69 (133)
                      ||||++.....|+.++||||  +||++++|++|.+|| .+.+...               .+..+..   ..        
T Consensus       167 ~aPE~~~~~~~~~~~~DiwS--lGvil~el~~g~~pf-~~~~~~~---------------~l~~i~~~~~~~~~~~~~~~  228 (299)
T d1ua2a_         167 RAPELLFGARMYGVGVDMWA--VGCILAELLLRVPFL-PGDSDLD---------------QLTRIFETLGTPTEEQWPDM  228 (299)
T ss_dssp             CCHHHHTTCSCCCHHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHHHCCCCTTTSSST
T ss_pred             ccHHHHccCCCCChhhhhhh--cchHHHHHHhCcCCC-CCCCHHH---------------HHHHHHHhcCCCChhhccch
Confidence            69999445667899999999  999999999999999 5543322               1211111   00        


Q ss_pred             -----------CCCcch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          70 -----------KPEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        70 -----------~~~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                                 .+..+.   ....++++.+|+.+||+.||.+|||++|+|+||||+..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~  286 (299)
T d1ua2a_         229 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR  286 (299)
T ss_dssp             TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             hccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCC
Confidence                       000000   12457899999999999999999999999999999853

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=7e-20  Score=130.92  Aligned_cols=90  Identities=20%  Similarity=0.327  Sum_probs=73.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|+.|| .+.+...               ....+. ...+.+  +..++
T Consensus       170 ~aPE~-~~~~~~~~~~DiwS--lGvilyemltG~~PF-~~~~~~~---------------~~~~i~-~~~~~~--p~~~s  227 (320)
T d1xjda_         170 IAPEI-LLGQKYNHSVDWWS--FGVLLYEMLIGQSPF-HGQDEEE---------------LFHSIR-MDNPFY--PRWLE  227 (320)
T ss_dssp             CCHHH-HTTCCBCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHH-HCCCCC--CTTSC
T ss_pred             CCHHH-HcCCCCCchhhhhh--hhHHHHHHHhCCCCC-CCCCHHH---------------HHHHHH-cCCCCC--CccCC
Confidence            69999 88889999999999  999999999999999 6544322               233333 333444  45679


Q ss_pred             HHHHHHHHHHhhhcccccCCHH-HHhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASAS-LLLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~-ell~h~~~~~  112 (133)
                      +.+.+|+.+||..||.+||++. ++++||||+.
T Consensus       228 ~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~  260 (320)
T d1xjda_         228 KEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE  260 (320)
T ss_dssp             HHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             HHHHHHHHHhcccCCCCCcCHHHHHHhCchhcc
Confidence            9999999999999999999995 8999999975

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2.3e-19  Score=128.95  Aligned_cols=98  Identities=16%  Similarity=0.288  Sum_probs=72.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc--hhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK--EKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   78 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|..|| .+.+......            .+..........++  ....
T Consensus       180 ~aPE~-~~~~~y~~~~DiwS--lGvily~lltg~~Pf-~~~~~~~~~~------------~~~~~i~~~~~~~~~~~~~~  243 (335)
T d2ozaa1         180 VAPEV-LGPEKYDKSCDMWS--LGVIMYILLCGYPPF-YSNHGLAISP------------GMKTRIRMGQYEFPNPEWSE  243 (335)
T ss_dssp             CCCCC-CCGGGGSHHHHHHH--HHHHHHHHTTSSCSC-EETTCC--------------------CCCSCSSSCCTTHHHH
T ss_pred             CCcHH-HcCCCCCHHHHHHh--hchhHHHHhhCCCCC-CCCCHHHHHH------------HHHHHHhcCCCCCCCccccc
Confidence            79999 88889999999999  999999999999999 6554332000            11111112222222  2346


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      +++++.+|+.+||..||++|||+.++++||||....
T Consensus       244 ~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~  279 (335)
T d2ozaa1         244 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  279 (335)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTT
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCC
Confidence            789999999999999999999999999999996543

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.3e-19  Score=126.80  Aligned_cols=86  Identities=17%  Similarity=0.342  Sum_probs=67.7

Q ss_pred             CCCccccCCCCC-CCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQY-GPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~-~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..+ +.++||||  +||++|+|++|+.|| .+.+                     .+... ...+  +..+
T Consensus       176 ~aPE~-~~~~~~~~~~~DiwS--lGvilyell~g~~Pf-~~~~---------------------~i~~~-~~~~--~~~~  227 (273)
T d1xwsa_         176 SPPEW-IRYHRYHGRSAAVWS--LGILLYDMVCGDIPF-EHDE---------------------EIIRG-QVFF--RQRV  227 (273)
T ss_dssp             SCHHH-HHHSCBCHHHHHHHH--HHHHHHHHHHSSCSC-CSHH---------------------HHHHC-CCCC--SSCC
T ss_pred             CCHHH-HcCCCCCCccccccc--ceeeehhHhhCCCCC-CCch---------------------HHhhc-ccCC--CCCC
Confidence            68999 655554 67799999  999999999999999 4311                     11111 1222  3467


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                      ++++++|+.+||..||.+|||++|+++||||+...
T Consensus       228 s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         228 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  262 (273)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence            89999999999999999999999999999998644

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.74  E-value=9.8e-19  Score=122.66  Aligned_cols=94  Identities=23%  Similarity=0.463  Sum_probs=70.1

Q ss_pred             CCCcccc-----CCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcc
Q psy9738           1 MAPEGGH-----HRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIK   74 (133)
Q Consensus         1 maPE~~~-----~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   74 (133)
                      +|||.+.     ....|+.++||||  +||++++|++|+.|| .+.+...               ....+.... .+..+
T Consensus       176 ~~PE~~~~~~~~~~~~~~~~~Diws--lGvilyeml~g~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~  237 (277)
T d1phka_         176 LAPEIIECSMNDNHPGYGKEVDMWS--TGVIMYTLLAGSPPF-WHRKQML---------------MLRMIMSGNYQFGSP  237 (277)
T ss_dssp             CCHHHHHHHHCTTSCCBCTHHHHHH--HHHHHHHHHHSSCSS-CCSSHHH---------------HHHHHHHTCCCCCTT
T ss_pred             CCHHHhhccccccCCCCCchheEcc--cchhhhhhccCCCCC-CCCCHHH---------------HHHHHHhCCCCCCCc
Confidence            4677722     2345788999999  999999999999999 5543222               233333322 12222


Q ss_pred             hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          75 EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        75 ~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ....+++++++|+.+||..||.+|||+.++|+||||+.
T Consensus       238 ~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         238 EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence            23568999999999999999999999999999999974

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=8.2e-19  Score=124.68  Aligned_cols=98  Identities=16%  Similarity=0.217  Sum_probs=67.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC----------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK----------   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------   70 (133)
                      +|||++.....|+.++||||  +||++++|++|+.|| .+.+...            .............          
T Consensus       188 ~aPE~~~~~~~~~~k~DiwS--lGvil~el~~g~~pf-~~~~~~~------------~~~~i~~~~~~~~~~~~~~~~~~  252 (318)
T d3blha1         188 RPPELLLGERDYGPPIDLWG--AGCIMAEMWTRSPIM-QGNTEQH------------QLALISQLCGSITPEVWPNVDNY  252 (318)
T ss_dssp             CCHHHHTTCSSCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH------------HHHHHHHHHCCCCTTTSTTCCCC
T ss_pred             hhHHHHcCCCCCCcHHHccc--CCceeeeHhhCCCCC-CCCCHHH------------HHHHHHHhcCCCChhhccccchh
Confidence            68999445567999999999  999999999999999 5433211            0001111110000          


Q ss_pred             -------------CCcch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          71 -------------PEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        71 -------------~~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                                   .....   ....++.+.+|+.+||+.||++|+|++|+|+||||+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         253 ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             -------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred             hhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence                         00000   01236788899999999999999999999999999864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.4e-19  Score=128.15  Aligned_cols=92  Identities=24%  Similarity=0.339  Sum_probs=72.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcc--hhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIK--EKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   78 (133)
                      ||||. ..+..|+.++||||  +||++|+|++|..|| .+.+...               ....+.... ..++  ....
T Consensus       170 ~ape~-~~~~~~~~~~DiWS--lGvily~ll~G~~Pf-~~~~~~~---------------~~~~i~~~~-~~~~~~~~~~  229 (321)
T d1tkia_         170 YAPEV-HQHDVVSTATDMWS--LGTLVYVLLSGINPF-LAETNQQ---------------IIENIMNAE-YTFDEEAFKE  229 (321)
T ss_dssp             SCHHH-HTTCEECHHHHHHH--HHHHHHHHHHSSCTT-CCSSHHH---------------HHHHHHHTC-CCCCHHHHTT
T ss_pred             ccchh-ccCCCCCchhhccc--HHHHHHHHHhCCCCC-CCCCHHH---------------HHHHHHhCC-CCCChhhccC
Confidence            68888 77888999999999  999999999999999 5544322               333333332 2222  1245


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      +++++++|+.+||..||.+|||+.|+++||||+.
T Consensus       230 ~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~  263 (321)
T d1tkia_         230 ISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence            7899999999999999999999999999999964

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.72  E-value=1.4e-18  Score=121.92  Aligned_cols=94  Identities=20%  Similarity=0.268  Sum_probs=67.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhh---CC--------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIAT---NK--------   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------   69 (133)
                      ++||.+.....++.++|+||  +|+++++|++|+.|| .+.+...               .+..+..   ..        
T Consensus       167 ~~pE~~~~~~~~~~~~Diws--lGv~l~el~~G~~pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  228 (286)
T d1ob3a_         167 RAPDVLMGSKKYSTTIDIWS--VGCIFAEMVNGTPLF-PGVSEAD---------------QLMRIFRILGTPNSKNWPNV  228 (286)
T ss_dssp             CCHHHHTTCCSCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH---------------HHHHHHHHHCCCCTTTSTTG
T ss_pred             hhHHHHhCCCCCCcceeehh--cCcHHHHHHHCCCCC-CCCCHHH---------------HHHHHHHhhCCCChhhccch
Confidence            57888445566789999999  999999999999999 5443211               1111100   00        


Q ss_pred             ------------CCCcc---hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          70 ------------KPEIK---EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        70 ------------~~~~~---~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                                  ....+   .....++.+.+|+.+||+.||.+|||++|+|+||||+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             GGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             hhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence                        00000   01235789999999999999999999999999999973

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3.4e-18  Score=123.39  Aligned_cols=108  Identities=16%  Similarity=0.168  Sum_probs=69.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCccc------c-hhhHHhhHHHHHHHhhhCCC---
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFL------I-PYLFILSCRQALYLIATNKK---   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~---   70 (133)
                      +|||+ +.+..|+.++||||  +||++++|++|.+|| .+.+.......      . +...+...............   
T Consensus       185 ~aPE~-l~~~~~~~~~DiwS--lG~~l~ell~g~~pF-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (355)
T d2b1pa1         185 RAPEV-ILGMGYKENVDIWS--VGCIMGEMVRHKILF-PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA  260 (355)
T ss_dssp             CCHHH-HTTCCCCTTHHHHH--HHHHHHHHHHSSCSS-CCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCC
T ss_pred             cChhh-hcCCCCCCCccccc--ccchHHHHhhCCCCC-CCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccc
Confidence            68999 77889999999999  999999999999999 55432110000      0 00000000000011111110   


Q ss_pred             --------------CCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          71 --------------PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        71 --------------~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                                    .........++.+.+|+.+||..||++|||++|+|+||||+.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~  316 (355)
T d2b1pa1         261 GLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  316 (355)
T ss_dssp             CCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             ccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence                          011112335778999999999999999999999999999975

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=2.5e-18  Score=121.42  Aligned_cols=97  Identities=22%  Similarity=0.268  Sum_probs=68.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC--CC--------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN--KK--------   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------   70 (133)
                      +|||++.....++.++|+||  +|+++|+|++|..|| .+.+...               .++.+...  .+        
T Consensus       169 ~apE~~~~~~~~~~~~DiwS--lGvily~m~~G~~Pf-~~~~~~~---------------~~~~i~~~~~~~~~~~~~~~  230 (298)
T d1gz8a_         169 RAPEILLGCKYYSTAVDIWS--LGCIFAEMVTRRALF-PGDSEID---------------QLFRIFRTLGTPDEVVWPGV  230 (298)
T ss_dssp             CCHHHHTTCSSCCTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH---------------HHHHHHHHHCCCCTTTSTTG
T ss_pred             eehhhhccccCCCccccccc--cchhhhHHhhCCCCC-CCCCHHH---------------HHHHHHHhcCCCchhhcccc
Confidence            58898334444578999999  999999999999999 5543221               11111100  00        


Q ss_pred             ----------CCcc------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCC
Q psy9738          71 ----------PEIK------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  115 (133)
Q Consensus        71 ----------~~~~------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~  115 (133)
                                +...      .....+..+.+|+.+||..||.+|||++|+++||||+....
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~  291 (298)
T d1gz8a_         231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK  291 (298)
T ss_dssp             GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             ccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence                      0000      01235688999999999999999999999999999986544

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=5.4e-18  Score=121.76  Aligned_cols=109  Identities=20%  Similarity=0.222  Sum_probs=68.3

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccc-------hhh-----HHhhHHHHHHHhhhC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLI-------PYL-----FILSCRQALYLIATN   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~-------~~~-----~~~~~~~~~~~~~~~   68 (133)
                      ||||++.....++.++||||  +||++++|++|.+|| .+.+.......+       +..     ...............
T Consensus       185 ~aPE~~~~~~~~~~~~DiwS--lGvil~ell~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (346)
T d1cm8a_         185 RAPEVILNWMRYTQTVDIWS--VGCIMAEMITGKTLF-KGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL  261 (346)
T ss_dssp             CCTHHHHTTTCCCTTHHHHH--HHHHHHHHHHSSCSS-CCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCC
T ss_pred             cCHHHHcCCCCCCccchhhc--chHHHHHHHHCcCCC-CCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcc
Confidence            68999445566789999999  999999999999999 544321100000       000     000000000000000


Q ss_pred             CCCCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          69 KKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        69 ~~~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ....+. .....++.+.+|+.+||..||.+|||+.|+|+||||+.
T Consensus       262 ~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~  306 (346)
T d1cm8a_         262 EKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES  306 (346)
T ss_dssp             CCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred             cccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCc
Confidence            001110 01345789999999999999999999999999999975

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=3.9e-18  Score=122.84  Aligned_cols=105  Identities=16%  Similarity=0.204  Sum_probs=68.7

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhH-----HHHHHHh----hhCCCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC-----RQALYLI----ATNKKP   71 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~----~~~~~~   71 (133)
                      +|||.+.....|+.++||||  +||++++|++|..|| .+.+....     ...+...     .+.....    .....+
T Consensus       189 ~aPE~~~~~~~~~~~~DIwS--lG~il~el~~g~~pf-~~~~~~~~-----l~~i~~~~g~~~~~~~~~~~~~~~~~~~~  260 (350)
T d1q5ka_         189 RAPELIFGATDYTSSIDVWS--AGCVLAELLLGQPIF-PGDSGVDQ-----LVEIIKVLGTPTREQIREMNPNYTEFKFP  260 (350)
T ss_dssp             CCHHHHTTCSSCCTHHHHHH--HHHHHHHHHHTSCSS-CCSSHHHH-----HHHHHHHHCCCCHHHHHHHCC---CCCCC
T ss_pred             cChHHhhcccCCCcceeecc--cceEEEehhhCCCCC-CCCCHHHH-----HHHHHHHhCCChHHhhhhhccchhhcccc
Confidence            58898455668999999999  999999999999999 54432110     0000000     0000000    000000


Q ss_pred             Ccc-------hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          72 EIK-------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        72 ~~~-------~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      ...       .....++.+.+|+.+||..||.+|||+.|+|+||||+.-
T Consensus       261 ~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         261 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             CCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             ccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence            000       013467899999999999999999999999999999753

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=9.2e-18  Score=120.44  Aligned_cols=110  Identities=18%  Similarity=0.199  Sum_probs=67.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchh------hH----HhhHHHHHHHhhhCCC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPY------LF----ILSCRQALYLIATNKK   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~------~~----~~~~~~~~~~~~~~~~   70 (133)
                      ||||+......++.++||||  +|+++++|++|..|| .+.+.......+-.      ..    ................
T Consensus       185 ~apE~~~~~~~~~~~~DiwS--lGv~l~~ll~g~~pF-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (348)
T d2gfsa1         185 RAPEIMLNWMHYNQTVDIWS--VGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM  261 (348)
T ss_dssp             SCHHHHTTCSCCCTTHHHHH--HHHHHHHHHHSSCSC-CCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCC
T ss_pred             cCchhhcCCccCCcccchhh--hhHHHHHHHhCCCCC-CCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccC
Confidence            68998444456788999999  999999999999999 65432110000000      00    0000000000000000


Q ss_pred             CCcch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          71 PEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        71 ~~~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                      +....   ....++.+.+|+.+||..||.+|+|+.|+|+||||+..
T Consensus       262 ~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         262 PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  307 (348)
T ss_dssp             CCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             CCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence            11100   12367889999999999999999999999999999853

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2.1e-17  Score=118.02  Aligned_cols=94  Identities=15%  Similarity=0.298  Sum_probs=68.3

Q ss_pred             CCCccccCC--CCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHR--KQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~--~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
                      |+||. +..  ..++.++||||  +||++|+|++|..|| .+.+......            .+........+.+  +..
T Consensus       197 ~~pe~-~~~~~~~~~~ksDIWS--lG~iLyelltG~~PF-~~~~~~~~~~------------~i~~~~~~~~~~~--~~~  258 (322)
T d1vzoa_         197 MAPDI-VRGGDSGHDKAVDWWS--LGVLMYELLTGASPF-TVDGEKNSQA------------EISRRILKSEPPY--PQE  258 (322)
T ss_dssp             CCHHH-HTTCC---CTHHHHHH--HHHHHHHHHHSSCTT-SCTTSCCCHH------------HHHHHHHHCCCCC--CTT
T ss_pred             chhHH-hhcCCcCCCchhhhHH--HHHHHHHHHhCCCCC-CCCCHHHHHH------------HHHHhcccCCCCC--ccc
Confidence            57888 433  24677899999  999999999999999 6554433100            1222222233333  456


Q ss_pred             hcHHHHHHHHHHhhhcccccC-----CHHHHhcCccccc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  112 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~-----s~~ell~h~~~~~  112 (133)
                      .++.+.+|+.+||..||.+|+     +++|+++||||+.
T Consensus       259 ~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~  297 (322)
T d1vzoa_         259 MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  297 (322)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             CCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcC
Confidence            899999999999999999999     5899999999975

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.67  E-value=1.9e-17  Score=118.01  Aligned_cols=110  Identities=15%  Similarity=0.205  Sum_probs=69.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHH---HHHHHhhhCCC-------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCR---QALYLIATNKK-------   70 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-------   70 (133)
                      +|||++.....|+.++|+||  +||+++++++|..|| ........... -...+....   ...........       
T Consensus       196 ~aPE~~~~~~~~~~~~Diws--lG~~l~e~~~g~~pf-~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  271 (328)
T d3bqca1         196 KGPELLVDYQMYDYSLDMWS--LGCMLASMIFRKEPF-FHGHDNYDQLV-RIAKVLGTEDLYDYIDKYNIELDPRFNDIL  271 (328)
T ss_dssp             CCHHHHTTCCCCCTHHHHHH--HHHHHHHHHHTCSSS-SCCSSHHHHHH-HHHHHHCHHHHHHHHHHTTCCCCGGGGGTC
T ss_pred             cCcccccCCCCCCcccchhh--hhhhhHHhccCCCCC-CCCchhHHHHH-HHHHHHCCchhhhhhhhcccccCcccchhc
Confidence            58999445567899999999  999999999999999 44332110000 000000000   00000000000       


Q ss_pred             -----------CCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          71 -----------PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        71 -----------~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                                 ........+++++.+|+.+||..||.+|+|++|+|+||||+...
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~  326 (328)
T d3bqca1         272 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  326 (328)
T ss_dssp             CCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSC
T ss_pred             ccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence                       00001234678999999999999999999999999999998643

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.5e-17  Score=115.32  Aligned_cols=100  Identities=17%  Similarity=0.265  Sum_probs=66.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-----------
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-----------   69 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------   69 (133)
                      ++||++.....++.++||||  +||++++|++|+.|| .......+.           .+.........           
T Consensus       168 ~~pe~~~~~~~~~~~~DiwS--lG~il~ell~g~~p~-~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~  233 (292)
T d1unla_         168 RPPDVLFGAKLYSTSIDMWS--AGCIFAELANAGRPL-FPGNDVDDQ-----------LKRIFRLLGTPTEEQWPSMTKL  233 (292)
T ss_dssp             CCHHHHTTCSCCCTHHHHHH--HHHHHHHHTTTSCCS-CCCSSHHHH-----------HHHHHHHHCCCCTTTCTTGGGS
T ss_pred             hhhhHhccCCCCCchhhccc--cchHHHHHhhCCCCC-CCCCCHHHH-----------HHHHHhhcCCCChhhhhhhhhc
Confidence            46777334445789999999  999999999999987 433221100           00111100000           


Q ss_pred             ------------CCCcchhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccCC
Q psy9738          70 ------------KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  114 (133)
Q Consensus        70 ------------~~~~~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~  114 (133)
                                  ..........++.+.+|+.+||+.||.+|||++|+|+||||+.-.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~  290 (292)
T d1unla_         234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred             ccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence                        000001234678999999999999999999999999999998543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.8e-17  Score=118.13  Aligned_cols=109  Identities=21%  Similarity=0.205  Sum_probs=67.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCccc------chhhH------HhhHHHHHHHhhhC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFL------IPYLF------ILSCRQALYLIATN   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~------~~~~~------~~~~~~~~~~~~~~   68 (133)
                      +|||++.....|+.++||||  +|+++++|++|..|| .+.+.......      .+...      ....+.........
T Consensus       179 ~aPE~l~~~~~~~~~~DiwS--lG~il~eml~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (345)
T d1pmea_         179 RAPEIMLNSKGYTKSIDIWS--VGCILAEMLSNRPIF-PGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK  255 (345)
T ss_dssp             CCGGGTTTBCSCSTHHHHHH--HHHHHHHHHHSSCSC-CCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCC
T ss_pred             chHHHhhcCCCCCchhhhhc--cCceehHHhhCCCCC-CCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCcc
Confidence            68999446667889999999  999999999999999 54432110000      00000      00000000000000


Q ss_pred             CCCCcc-hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCccccc
Q psy9738          69 KKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  112 (133)
Q Consensus        69 ~~~~~~-~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~  112 (133)
                      ...... .....++.+.+|+.+||..||.+|||++++|+||||+.
T Consensus       256 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~  300 (345)
T d1pmea_         256 NKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ  300 (345)
T ss_dssp             CCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred             CCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence            001110 01245788999999999999999999999999999974

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.66  E-value=2.9e-17  Score=118.10  Aligned_cols=109  Identities=18%  Similarity=0.187  Sum_probs=66.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhH-HhhH-----HHHHHH------hhhC
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLF-ILSC-----RQALYL------IATN   68 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~------~~~~   68 (133)
                      ||||+ +....|+.++|+||  +|+++++|++|+.|| ................ ....     ......      ....
T Consensus       196 ~aPE~-~~~~~~~~~~DiwS--lG~il~el~~g~~pF-~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  271 (362)
T d1q8ya_         196 RSPEV-LLGAPWGCGADIWS--TACLIFELITGDFLF-EPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNS  271 (362)
T ss_dssp             CCHHH-HHTCCCCTHHHHHH--HHHHHHHHHHSSCCC----------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC
T ss_pred             cChhh-ccccCCCccccccc--hHHHHHHHHHCCCCC-CCCccccccchhHHHHHHHHHhCCCCHHHhhccccccccccc
Confidence            68999 77888999999999  999999999999999 4432211000000000 0000     000000      0000


Q ss_pred             -----CCCC-----c--------chhhhhcHHHHHHHHHHhhhcccccCCHHHHhcCcccccC
Q psy9738          69 -----KKPE-----I--------KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  113 (133)
Q Consensus        69 -----~~~~-----~--------~~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~  113 (133)
                           ....     .        ......++.+.+|+.+||..||.+|||++|+|+||||+..
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         272 RGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  334 (362)
T ss_dssp             --CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             chhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence                 0000     0        0013356789999999999999999999999999999854

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.4e-17  Score=118.99  Aligned_cols=86  Identities=17%  Similarity=0.178  Sum_probs=68.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCC-CCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   78 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++ |..|| .+.+...               .+..+.... .++.  +..
T Consensus       233 ~aPE~-l~~~~~~~~~DiwS--~Gvil~emlt~g~~Pf-~~~~~~~---------------~~~~~~~~~~~~~~--p~~  291 (325)
T d1rjba_         233 MAPES-LFEGIYTIKSDVWS--YGILLWEIFSLGVNPY-PGIPVDA---------------NFYKLIQNGFKMDQ--PFY  291 (325)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHTTTSCCSS-TTCCCSH---------------HHHHHHHTTCCCCC--CTT
T ss_pred             CChHH-HcCCCCCcceeccc--hhHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHhcCCCCCC--CCc
Confidence            79999 77888999999999  9999999997 89999 5544333               333333332 2333  567


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      .++.+.+|+.+||..||++|||++++++|
T Consensus       292 ~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         292 ATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            88999999999999999999999999864

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=3.8e-18  Score=119.57  Aligned_cols=89  Identities=12%  Similarity=0.244  Sum_probs=68.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++||||  +|+++|+|++ |+.|| .+.+..+               ....+.....+..  +..+
T Consensus       177 ~APE~-l~~~~~~~~sDiwS--~Gv~l~ellt~g~~Pf-~~~~~~~---------------~~~~i~~~~~~~~--p~~~  235 (277)
T d1xbba_         177 YAPEC-INYYKFSSKSDVWS--FGVLMWEAFSYGQKPY-RGMKGSE---------------VTAMLEKGERMGC--PAGC  235 (277)
T ss_dssp             CCHHH-HHHCEEEHHHHHHH--HHHHHHHHHTTTCCSS-TTCCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cCchh-hcCCCCCchhhhcc--chhhhhHHhhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--Cccc
Confidence            79999 77788999999999  9999999997 89999 5433222               2333434444444  4568


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh---cCccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL---KHPFL  110 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell---~h~~~  110 (133)
                      +..+.+|+.+||..||.+|||+++++   +|+|+
T Consensus       236 ~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         236 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence            89999999999999999999999974   55554

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2e-17  Score=115.37  Aligned_cols=86  Identities=12%  Similarity=0.218  Sum_probs=68.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++||||  +|+++|+|++ |.+|| .+.+...               ....+.....+.+  +..+
T Consensus       176 ~apE~-l~~~~~~~~~DiwS--lGvil~e~lt~g~~P~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  234 (273)
T d1mp8a_         176 MAPES-INFRRFTSASDVWM--FGVCMWEILMHGVKPF-QGVKNND---------------VIGRIENGERLPM--PPNC  234 (273)
T ss_dssp             CCHHH-HHHCCCSHHHHHHH--HHHHHHHHHTTSCCTT-TTCCGGG---------------HHHHHHTTCCCCC--CTTC
T ss_pred             chhhH-hccCCCCCcccccc--chHHHHHHHhcCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCCC
Confidence            68999 77888999999999  9999999997 88999 5544433               3444444444444  5578


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      ++.+.+|+.+||..||.+|||+.++++|
T Consensus       235 ~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         235 PPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            8999999999999999999999999753

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=7.9e-18  Score=118.41  Aligned_cols=90  Identities=12%  Similarity=0.244  Sum_probs=70.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +..+.|+.++||||  +|+++|||++ |..|| .+.+...               ....+.....+.+  +..+
T Consensus       179 ~aPE~-~~~~~~~~ksDVwS--~Gv~l~E~lt~G~~Pf-~~~~~~~---------------~~~~i~~~~~~~~--p~~~  237 (285)
T d1u59a_         179 YAPEC-INFRKFSSRSDVWS--YGVTMWEALSYGQKPY-KKMKGPE---------------VMAFIEQGKRMEC--PPEC  237 (285)
T ss_dssp             CCHHH-HHHCEECHHHHHHH--HHHHHHHHHTTSCCTT-TTCCTHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cChHH-HhCCCCCccchhhc--chHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CCcC
Confidence            79999 77788999999999  9999999997 89999 5443322               3334444444444  5578


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHH---hcCcccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLL---LKHPFLK  111 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~el---l~h~~~~  111 (133)
                      ++++.+++.+||..||.+|||+.++   |+|.|+.
T Consensus       238 ~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         238 PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            8999999999999999999999887   5677764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=2.1e-17  Score=114.73  Aligned_cols=86  Identities=15%  Similarity=0.192  Sum_probs=68.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +..+.|+.++||||  +|+++|+|++ |+.|| .+.+...               ....+.....+..  +...
T Consensus       168 ~aPE~-~~~~~~~~ksDiwS--~G~~l~el~t~g~~Pf-~~~~~~~---------------~~~~i~~~~~~~~--p~~~  226 (258)
T d1k2pa_         168 SPPEV-LMYSKFSSKSDIWA--FGVLMWEIYSLGKMPY-ERFTNSE---------------TAEHIAQGLRLYR--PHLA  226 (258)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCTT-TTSCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             CCcHH-hcCCCCCcceeecc--cchhhHhHHhcCCCCC-CCCCHHH---------------HHHHHHhCCCCCC--cccc
Confidence            68999 77888999999999  9999999997 89999 5443222               3333444333333  5567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      ++.+.+|+.+||..||++|||++++++|
T Consensus       227 ~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         227 SEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             cHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            8999999999999999999999999875

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.63  E-value=2.1e-17  Score=115.40  Aligned_cols=90  Identities=18%  Similarity=0.356  Sum_probs=67.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCC-CCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++||||  +|+++|+|++|..|| .+.+...               ....+....+ +.......+
T Consensus       181 ~aPE~-~~~~~~~~~~DiwS--lGvilyelltG~~Pf-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  241 (277)
T d1o6ya_         181 LSPEQ-ARGDSVDARSDVYS--LGCVLYEVLTGEPPF-TGDSPVS---------------VAYQHVREDPIPPSARHEGL  241 (277)
T ss_dssp             CCHHH-HTTCCCCHHHHHHH--HHHHHHHHHHSSCSC-CCSSHHH---------------HHHHHHHCCCCCGGGTSSSC
T ss_pred             cCHHH-HcCCCCCcceeccc--chHHHHHHHhCCCCC-CCcCHHH---------------HHHHHHhcCCCCCchhccCC
Confidence            79999 88888999999999  999999999999999 5544322               3333443332 222223467


Q ss_pred             cHHHHHHHHHHhhhcccccC-CHHHHhcCccc
Q psy9738          80 SQIFQDFLDQCLEEEVETRA-SASLLLKHPFL  110 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~-s~~ell~h~~~  110 (133)
                      ++.+.+|+.+||..||.+|| |+++++ |+|.
T Consensus       242 s~~l~~li~~~L~~dp~~R~~sa~~l~-~~l~  272 (277)
T d1o6ya_         242 SADLDAVVLKALAKNPENRYQTAAEMR-ADLV  272 (277)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCSSHHHHH-HHHH
T ss_pred             CHHHHHHHHHHccCCHhHCHhHHHHHH-HHHH
Confidence            89999999999999999999 566654 5554

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=5.7e-17  Score=112.59  Aligned_cols=86  Identities=19%  Similarity=0.234  Sum_probs=64.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhC-CCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEG-EPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++||||  +|+++|+|+++ .+|+ ...+...               ....+.....+..  +...
T Consensus       169 ~aPE~-l~~~~~~~k~DVwS--~Gvil~el~t~~~~~~-~~~~~~~---------------~~~~i~~~~~~~~--p~~~  227 (263)
T d1sm2a_         169 ASPEV-FSFSRYSSKSDVWS--FGVLMWEVFSEGKIPY-ENRSNSE---------------VVEDISTGFRLYK--PRLA  227 (263)
T ss_dssp             CCHHH-HTTCCCCHHHHHHH--HHHHHHHHHTTSCCTT-CSCCHHH---------------HHHHHHHTCCCCC--CTTS
T ss_pred             CChHH-hcCCCCCchhhhcc--hHHHHHHHHHCCCCCC-CCCCHHH---------------HHHHHHhcCCCCC--cccc
Confidence            79999 88889999999999  99999999985 5555 3222111               2333333333333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      ++.+.+++.+||..||.+|||++++++|
T Consensus       228 ~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         228 STHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            8999999999999999999999999864

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.5e-17  Score=116.13  Aligned_cols=91  Identities=11%  Similarity=0.173  Sum_probs=68.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +..+.|+.++||||  +|+++|+|++|..|+ .......              .....+.....+..  +..++
T Consensus       177 ~APE~-~~~~~~~~~sDvwS--~Gvvl~ellt~~~~~-~~~~~~~--------------~~~~~i~~~~~~~~--p~~~~  236 (272)
T d1qpca_         177 TAPEA-INYGTFTIKSDVWS--FGILLTEIVTHGRIP-YPGMTNP--------------EVIQNLERGYRMVR--PDNCP  236 (272)
T ss_dssp             SCHHH-HHHCEECHHHHHHH--HHHHHHHHHTTTCCS-STTCCHH--------------HHHHHHHTTCCCCC--CTTCC
T ss_pred             cChHH-HhCCCCCchhhhhh--hHHHHHHHHhCCCCC-CCCCCHH--------------HHHHHHHhcCCCCC--cccCh
Confidence            79999 77778999999999  999999999965554 2322211              02333333333333  45688


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc--Ccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK--HPFLK  111 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~--h~~~~  111 (133)
                      ..+.+|+.+||..||.+|||++++++  |+||.
T Consensus       237 ~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         237 EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            99999999999999999999999986  77775

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=5.6e-17  Score=112.77  Aligned_cols=85  Identities=14%  Similarity=0.205  Sum_probs=67.5

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.++.|+.++||||  +|+++|+|++ |.+|| ...+...               ....+.....+.+  +...
T Consensus       167 ~aPE~-l~~~~~t~~sDIwS--fG~il~el~t~~~~p~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  225 (262)
T d1byga_         167 TAPEA-LREKKFSTKSDVWS--FGILLWEIYSFGRVPY-PRIPLKD---------------VVPRVEKGYKMDA--PDGC  225 (262)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCSC-TTSCGGG---------------HHHHHTTTCCCCC--CTTC
T ss_pred             CChHH-HhCCCCChHHHHHh--HHHHHHHHHHCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--CccC
Confidence            68999 77788999999999  9999999997 67878 4443333               3444444444555  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++.+.+|+.+||..||.+|||+.++++
T Consensus       226 ~~~~~~li~~cl~~dP~~Rps~~~l~~  252 (262)
T d1byga_         226 PPAVYEVMKNCWHLDAAMRPSFLQLRE  252 (262)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            899999999999999999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=9.2e-17  Score=114.22  Aligned_cols=86  Identities=10%  Similarity=0.127  Sum_probs=66.9

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.++.|+.++||||  +|+++|+|++ |.+|| .+.+...               ....+.....+..  +...
T Consensus       180 ~APE~-l~~~~~~~~sDvwS--~Gvil~el~t~g~~p~-~~~~~~~---------------~~~~i~~~~~~~~--p~~~  238 (317)
T d1xkka_         180 MALES-ILHRIYTHQSDVWS--YGVTVWELMTFGSKPY-DGIPASE---------------ISSILEKGERLPQ--PPIC  238 (317)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCTT-TTSCGGG---------------HHHHHHHTCCCCC--CTTB
T ss_pred             cChHH-HhcCCCChhhhhhh--HHHHHHHHHHCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--Cccc
Confidence            79999 77788999999999  9999999998 78888 4433322               2222333333333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      ++.+.+++.+||..||.+|||+.+++.|
T Consensus       239 ~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         239 TIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence            8999999999999999999999999865

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.61  E-value=1.2e-16  Score=113.00  Aligned_cols=85  Identities=12%  Similarity=0.323  Sum_probs=66.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +..+.|+.++||||  +||++|+|++ |..|| .+.....               ....+.....+..  +...
T Consensus       200 ~aPE~-~~~~~~~~~sDvwS--~Gvvl~el~t~g~~Pf-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  258 (299)
T d1jpaa_         200 TAPEA-IQYRKFTSASDVWS--YGIVMWEVMSYGERPY-WDMTNQD---------------VINAIEQDYRLPP--PMDC  258 (299)
T ss_dssp             SCHHH-HHSCCCCHHHHHHH--HHHHHHHHHTTSCCTT-TTCCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             cCHHH-HhcCCCCccccccc--chHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--Cccc
Confidence            78999 77888999999999  9999999997 89999 5433222               3333433333333  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      +..+.+++.+||..||.+|||+.++++
T Consensus       259 ~~~l~~li~~cl~~~P~~RPs~~ei~~  285 (299)
T d1jpaa_         259 PSALHQLMLDCWQKDRNHRPKFGQIVN  285 (299)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             hHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            899999999999999999999999875

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3.5e-16  Score=109.39  Aligned_cols=88  Identities=16%  Similarity=0.386  Sum_probs=64.4

Q ss_pred             CCCccccC---CCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHH-hhhCC-CCCcc-
Q psy9738           1 MAPEGGHH---RKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYL-IATNK-KPEIK-   74 (133)
Q Consensus         1 maPE~~~~---~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~-   74 (133)
                      ||||+ +.   ...|+.++||||  +|+++|+|++|+.|| .+.+...               .... +.... .+.+. 
T Consensus       173 ~APE~-l~~~~~~~~~~~sDiwS--~Gv~l~el~tg~~Pf-~~~~~~~---------------~~~~~~~~~~~~p~~~~  233 (276)
T d1uwha_         173 MAPEV-IRMQDKNPYSFQSDVYA--FGIVLYELMTGQLPY-SNINNRD---------------QIIFMVGRGYLSPDLSK  233 (276)
T ss_dssp             CCHHH-HTTCSSCCCCHHHHHHH--HHHHHHHHHHSSCTT-TTCCCHH---------------HHHHHHHHTSCCCCGGG
T ss_pred             CCHHH-HhcccCCCCCchhhhhh--hHHHHHHHHHCCCCC-CCCChHH---------------HHHHHHhcCCCCCcchh
Confidence            79999 53   245888999999  999999999999999 5443322               2222 22221 22221 


Q ss_pred             hhhhhcHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          75 EKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        75 ~~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      .+...++.+.+|+.+||..||.+|||+.+++++
T Consensus       234 ~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         234 VRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             SCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            134578899999999999999999999999864

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2.3e-16  Score=110.84  Aligned_cols=94  Identities=14%  Similarity=0.199  Sum_probs=70.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +..+.++.++||||  +|+++|+|++|..|+ .......              .....+.....++.  +..++
T Consensus       181 ~aPE~-~~~~~~~~ksDI~S--~Giil~el~t~~~p~-~~~~~~~--------------~~~~~i~~~~~~~~--~~~~~  240 (285)
T d1fmka3         181 TAPEA-ALYGRFTIKSDVWS--FGILLTELTTKGRVP-YPGMVNR--------------EVLDQVERGYRMPC--PPECP  240 (285)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTTCCS-STTCCHH--------------HHHHHHHTTCCCCC--CTTSC
T ss_pred             cChHH-HhCCCCCcHHhhhc--chHHHHHHHhCCCCC-CCCCCHH--------------HHHHHHHhcCCCCC--CcccC
Confidence            68999 77888999999999  999999999976555 3332221              02333333333344  55788


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc--CcccccCC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK--HPFLKIAR  114 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~--h~~~~~~~  114 (133)
                      ..+.+|+.+||..||++||++++++.  ++||....
T Consensus       241 ~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         241 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             HHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence            99999999999999999999999876  78886543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1.9e-16  Score=111.78  Aligned_cols=85  Identities=13%  Similarity=0.229  Sum_probs=65.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +..+.|+.++||||  +|+++|+|++ |.+|| .+.+...               ....+.....+..  +...
T Consensus       204 ~aPE~-l~~~~y~~k~DiwS--~Gvvl~ell~~g~~p~-~~~~~~~---------------~~~~i~~~~~~~~--p~~~  262 (299)
T d1fgka_         204 MAPEA-LFDRIYTHQSDVWS--FGVLLWEIFTLGGSPY-PGVPVEE---------------LFKLLKEGHRMDK--PSNC  262 (299)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCSS-TTCCHHH---------------HHHHHHTTCCCCC--CSSC
T ss_pred             hhhhH-hcCCCCCchhhhHH--hHHHHHHhccCCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--Cccc
Confidence            68999 77789999999999  9999999997 68888 4332211               2222333333444  5567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++.+.+|+.+||+.||+.|||+.++++
T Consensus       263 ~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         263 TNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            899999999999999999999999974

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=3e-16  Score=110.51  Aligned_cols=86  Identities=14%  Similarity=0.179  Sum_probs=66.1

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCC-CCCCCCCCCCCCcccchhhHHhhHHHHHH-HhhhCCCCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGE-PPLIWNENPLRPHFLIPYLFILSCRQALY-LIATNKKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   78 (133)
                      ||||+ +.+..|+.++||||  +||++|+|++|. +|| .+.....               ... .+.....+..  +..
T Consensus       203 ~APE~-l~~~~~~~~sDiwS--~Gvil~ellt~~~~p~-~~~~~~~---------------~~~~~~~~~~~~~~--~~~  261 (299)
T d1ywna1         203 MAPET-IFDRVYTIQSDVWS--FGVLLWEIFSLGASPY-PGVKIDE---------------EFCRRLKEGTRMRA--PDY  261 (299)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCSS-TTCCCSH---------------HHHHHHHHTCCCCC--CTT
T ss_pred             cchhH-hhcCCCCcccceee--hHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHhcCCCCCC--Ccc
Confidence            79999 77888999999999  999999999874 677 4433322               222 2223333444  456


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      .++++.+++.+||..||.+|||+.++++|
T Consensus       262 ~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         262 TTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            78999999999999999999999999875

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.57  E-value=4.6e-16  Score=109.31  Aligned_cols=97  Identities=12%  Similarity=0.159  Sum_probs=69.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhh-hCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIA-TNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++||||  +|+++|+|++|..|+ .......               ...... ....+..  +...
T Consensus       183 ~aPE~-~~~~~~~~k~DiwS--~Gv~l~ell~~~~p~-~~~~~~~---------------~~~~~i~~~~~~~~--~~~~  241 (287)
T d1opja_         183 TAPES-LAYNKFSIKSDVWA--FGVLLWEIATYGMSP-YPGIDLS---------------QVYELLEKDYRMER--PEGC  241 (287)
T ss_dssp             CCHHH-HHHCCCSHHHHHHH--HHHHHHHHHTTSCCS-STTCCHH---------------HHHHHHHTTCCCCC--CTTC
T ss_pred             cChHH-HcCCCCCchhhhhh--HHHHHHHHHhCCCCC-CCcchHH---------------HHHHHHhcCCCCCC--Cccc
Confidence            69999 77888999999999  999999999977666 3433222               222222 2223333  5568


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcCcccccCCCCCChh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT  120 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h~~~~~~~~~~~~~  120 (133)
                      ++.+.+|+.+||..||.+|||++++++  ++..-....++.
T Consensus       242 ~~~l~~li~~cl~~dP~~Rps~~ei~~--~L~~~~~~~~~~  280 (287)
T d1opja_         242 PEKVYELMRACWQWNPSDRPSFAEIHQ--AFETMFQESSIS  280 (287)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH--HHHHTTSSSCHH
T ss_pred             hHHHHHHHHHHcCCCHhHCcCHHHHHH--HHHHHHHhCCCC
Confidence            899999999999999999999999964  443333334443

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.5e-16  Score=111.61  Aligned_cols=86  Identities=15%  Similarity=0.154  Sum_probs=66.4

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCC-CCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGE-PPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||. +..+.|+.++||||  +|+++++|++|. +|| .+.+...               ....+.....+..  +...
T Consensus       193 ~aPE~-l~~~~~~~~sDvwS--fGvil~ell~~~~~p~-~~~~~~~---------------~~~~i~~~~~~~~--~~~~  251 (309)
T d1fvra_         193 MAIES-LNYSVYTTNSDVWS--YGVLLWEIVSLGGTPY-CGMTCAE---------------LYEKLPQGYRLEK--PLNC  251 (309)
T ss_dssp             CCHHH-HHHCEECHHHHHHH--HHHHHHHHHTTSCCTT-TTCCHHH---------------HHHHGGGTCCCCC--CTTB
T ss_pred             cchHH-hccCCCCccceeeh--hHHHHHHHHhcCCCCC-CCCCHHH---------------HHHHHHhcCCCCC--CccC
Confidence            68999 77788999999999  999999999976 456 4333222               3333444434444  4568


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      ++++.+|+.+||..||++|||+++++++
T Consensus       252 ~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         252 DDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            8999999999999999999999999865

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.56  E-value=5.1e-16  Score=109.58  Aligned_cols=85  Identities=12%  Similarity=0.228  Sum_probs=66.0

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCC-CCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGE-PPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++||||  +|+++|+|++|. +|| .+.+...               ....+.....+..  +..+
T Consensus       209 ~aPE~-~~~~~~t~ksDVwS--~Gvvl~ell~~~~~p~-~~~~~~e---------------~~~~v~~~~~~~~--p~~~  267 (301)
T d1lufa_         209 MPPES-IFYNRYTTESDVWA--YGVVLWEIFSYGLQPY-YGMAHEE---------------VIYYVRDGNILAC--PENC  267 (301)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTTCCTT-TTSCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             CCHHH-HccCCCChhhhhcc--chhhHHHHHccCCCCC-CCCCHHH---------------HHHHHHcCCCCCC--Cccc
Confidence            68999 77888999999999  999999999885 567 4433222               3334444443444  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++++.+++.+||..+|.+|||+.++++
T Consensus       268 ~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         268 PLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            899999999999999999999999853

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=4.9e-16  Score=108.45  Aligned_cols=85  Identities=19%  Similarity=0.255  Sum_probs=65.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||+ +.+..|+.++||||  +|+++|+|++ |..|| .+.+...               ....+.... ...+.+..+
T Consensus       181 ~aPE~-~~~~~~~~~~Di~S--~Gvil~emlt~G~~Pf-~~~~~~~---------------~~~~i~~~~-~~~~~~~~~  240 (273)
T d1u46a_         181 CAPES-LKTRTFSHASDTWM--FGVTLWEMFTYGQEPW-IGLNGSQ---------------ILHKIDKEG-ERLPRPEDC  240 (273)
T ss_dssp             CCHHH-HHHCEEEHHHHHHH--HHHHHHHHHTTSCCTT-TTCCHHH---------------HHHHHHTSC-CCCCCCTTC
T ss_pred             CCHHH-HhCCCCCcchhhhh--hHHHHHHHHhCCCCCC-CCcCHHH---------------HHHHHHhCC-CCCCCcccc
Confidence            68998 77788999999999  9999999997 89999 5543322               333343332 222224567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      ++.+.+++.+||..||.+|||+.+++
T Consensus       241 ~~~l~~li~~cl~~dp~~RPt~~ei~  266 (273)
T d1u46a_         241 PQDIYNVMVQCWAHKPEDRPTFVALR  266 (273)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             cHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            89999999999999999999999985

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=8.6e-16  Score=107.58  Aligned_cols=86  Identities=10%  Similarity=0.157  Sum_probs=64.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.++.|+.++||||  +|+++|+|++|..|+ .......              +....+.....+..  +...+
T Consensus       180 ~APE~-l~~~~~~~~sDI~S--~Gvil~el~t~~~~~-~~~~~~~--------------~~~~~i~~~~~~~~--~~~~~  239 (283)
T d1mqba_         180 TAPEA-ISYRKFTSASDVWS--FGIVMWEVMTYGERP-YWELSNH--------------EVMKAINDGFRLPT--PMDCP  239 (283)
T ss_dssp             SCHHH-HHSCCCCHHHHHHH--HHHHHHHHHTTSCCT-TTTCCHH--------------HHHHHHHTTCCCCC--CTTCB
T ss_pred             cCHHH-HccCCCCCcccccc--cHHHHHHHHhCCCCc-cccCCHH--------------HHHHHHhccCCCCC--chhhH
Confidence            79999 88889999999999  999999999976665 3332211              02223333333333  45678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ..+.+++.+||..||++||++.++++
T Consensus       240 ~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         240 SAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            99999999999999999999999875

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.5e-15  Score=107.81  Aligned_cols=87  Identities=14%  Similarity=0.202  Sum_probs=64.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||. +....++.++||||  +|++++++++|..|| .......+              ....+.....+..  +...+
T Consensus       201 ~aPE~-~~~~~~~~ksDI~S--fGivl~El~t~~~p~-~~~~~~~~--------------~~~~i~~g~~~~~--p~~~~  260 (311)
T d1r0pa_         201 MALES-LQTQKFTTKSDVWS--FGVLLWELMTRGAPP-YPDVNTFD--------------ITVYLLQGRRLLQ--PEYCP  260 (311)
T ss_dssp             SCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTSCCS-CC--------------------CHHHHHTTCCCCC--CTTCC
T ss_pred             cChHH-HhcCCCCChhHhhh--hHHHHHHHHHCCCCC-CCCCCHHH--------------HHHHHHcCCCCCC--cccCc
Confidence            68888 77788999999999  999999999988777 33322110              2223333333333  45678


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHhcC
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLLKH  107 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell~h  107 (133)
                      +.+.+|+.+||..||.+||++.|+++|
T Consensus       261 ~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         261 DPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            999999999999999999999999865

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.8e-15  Score=107.06  Aligned_cols=85  Identities=9%  Similarity=0.182  Sum_probs=65.6

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCC-CCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGE-PPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL   79 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (133)
                      ||||. +.++.|+.++|+||  +|+++++|++|. +|| .+.+..+               ....+.....+..  +...
T Consensus       202 ~aPe~-l~~~~~~~~~Dv~S--~G~il~El~t~~~~p~-~~~~~~~---------------~~~~i~~~~~~~~--p~~~  260 (308)
T d1p4oa_         202 MSPES-LKDGVFTTYSDVWS--FGVVLWEIATLAEQPY-QGLSNEQ---------------VLRFVMEGGLLDK--PDNC  260 (308)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHHTSCCTT-TTSCHHH---------------HHHHHHTTCCCCC--CTTC
T ss_pred             CCHHH-HccCCCCccccccc--HHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHhCCCCCC--cccc
Confidence            68888 77888999999999  999999999985 666 4333222               3333444333433  4567


Q ss_pred             cHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          80 SQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        80 ~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++.+.+++.+||+.+|++|||+.++++
T Consensus       261 ~~~l~~li~~cl~~~P~~RPs~~~il~  287 (308)
T d1p4oa_         261 PDMLFELMRMCWQYNPKMRPSFLEIIS  287 (308)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            899999999999999999999999875

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=8.2e-15  Score=103.74  Aligned_cols=85  Identities=14%  Similarity=0.218  Sum_probs=63.8

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHh-CCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC-CCCCcchhhh
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIE-GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN-KKPEIKEKEK   78 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   78 (133)
                      ||||+ +.++.++.++||||  +|+++++|++ |.+++ .+.+...               ....+... ..+..  +..
T Consensus       214 ~aPE~-~~~~~~~~~~DIwS--~G~~l~ellt~g~p~~-~~~~~~~---------------~~~~~i~~~~~~~~--~~~  272 (311)
T d1t46a_         214 MAPES-IFNCVYTFESDVWS--YGIFLWELFSLGSSPY-PGMPVDS---------------KFYKMIKEGFRMLS--PEH  272 (311)
T ss_dssp             CCHHH-HHHCCCCHHHHHHH--HHHHHHHHHTTTCCSS-TTCCSSH---------------HHHHHHHHTCCCCC--CTT
T ss_pred             cCHHH-hcCCCCCCcccccc--hHHHHHHHHhCCCCCC-CCCCHHH---------------HHHHHHhcCCCCCC--ccc
Confidence            68998 77788999999999  9999999998 45555 4433332               23333322 22333  456


Q ss_pred             hcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          79 LSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        79 ~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      .+..+.+|+.+||..||.+|||++++++
T Consensus       273 ~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         273 APAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            7899999999999999999999999874

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.46  E-value=1.3e-14  Score=101.92  Aligned_cols=98  Identities=9%  Similarity=0.079  Sum_probs=65.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++||||  +|+++++|++|..|| ...........+        ............+.+  ...++
T Consensus       180 ~aPE~-~~~~~~~~~~DiwS--lG~~l~el~tg~~P~-~~~~~~~~~~~~--------~~~~~~~~~~~~~~~--~~~~p  245 (299)
T d1ckia_         180 ASINT-HLGIEQSRRDDLES--LGYVLMYFNLGSLPW-QGLKAATKRQKY--------ERISEKKMSTPIEVL--CKGYP  245 (299)
T ss_dssp             CCHHH-HTTBCCCHHHHHHH--HHHHHHHHHHSSCTT-CCCC-------H--------HHHHHHHHHSCHHHH--TTTSC
T ss_pred             cCHHH-HhCCCCCChhhEEe--cCHHHHHHHhCCCcc-cccchHHHHHHH--------HHhhcccCCCChhHh--ccCCC
Confidence            78999 88888999999999  999999999999999 544332211000        000000001110111  23568


Q ss_pred             HHHHHHHHHHhhhcccccCCHHH---HhcCccccc
Q psy9738          81 QIFQDFLDQCLEEEVETRASASL---LLKHPFLKI  112 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~e---ll~h~~~~~  112 (133)
                      +++.+|+..|+..+|++||++++   +|+|.|.+.
T Consensus       246 ~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~  280 (299)
T d1ckia_         246 SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  280 (299)
T ss_dssp             HHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHc
Confidence            89999999999999999999875   466776543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=3.5e-13  Score=95.01  Aligned_cols=101  Identities=11%  Similarity=0.114  Sum_probs=58.8

Q ss_pred             CCCccccCCC------CCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhC--CCCC
Q psy9738           1 MAPEGGHHRK------QYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATN--KKPE   72 (133)
Q Consensus         1 maPE~~~~~~------~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   72 (133)
                      ||||+ +.+.      .++.++||||  +|+++|+|++|..|+ .........+........... ........  ..+.
T Consensus       179 ~aPE~-~~~~~~~~~~~~~~k~Di~S--~Gvvl~el~tg~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~  253 (303)
T d1vjya_         179 MAPEV-LDDSINMKHFESFKRADIYA--MGLVFWEIARRCSIG-GIHEDYQLPYYDLVPSDPSVE-EMRKVVCEQKLRPN  253 (303)
T ss_dssp             CCHHH-HTTCSCTTCHHHHHHHHHHH--HHHHHHHHHHTBCBT-TBCCCCCCTTTTTSCSSCCHH-HHHHHHTTSCCCCC
T ss_pred             CChhh-ccccccccCCCcCcchhhhh--hHHHHHHHhhCCCCC-CcccccccchhhcccccchHH-HHHHHHhccccCCC
Confidence            68998 5443      2567899999  999999999998877 322211111100000000000 11111111  1133


Q ss_pred             cch---hhhhcHHHHHHHHHHhhhcccccCCHHHHhc
Q psy9738          73 IKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLK  106 (133)
Q Consensus        73 ~~~---~~~~~~~~~~ll~~~L~~~p~~R~s~~ell~  106 (133)
                      ++.   .......+.+++.+||+.||.+|||+.|+++
T Consensus       254 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         254 IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             CCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             CCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            321   1223456889999999999999999999864

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.29  E-value=1.4e-12  Score=91.38  Aligned_cols=91  Identities=8%  Similarity=0.091  Sum_probs=62.2

Q ss_pred             CCCccccCCCCCCCccccchhHHHHHHHHHHhCCCCCCCCCCCCCCcccchhhHHhhHHHHHHHhhhCCCCCcchhhhhc
Q psy9738           1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS   80 (133)
Q Consensus         1 maPE~~~~~~~~~~~~Diws~~~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (133)
                      ||||+ +.+..|+.++|+||  +|+++++|++|..|| .+........        ...+............+  ...++
T Consensus       180 ~aPE~-~~~~~~~~~~DiwS--lG~~l~elltg~~Pf-~~~~~~~~~~--------~~~~i~~~~~~~~~~~l--~~~~p  245 (293)
T d1csna_         180 MSINT-HLGREQSRRDDLEA--LGHVFMYFLRGSLPW-QGLKAATNKQ--------KYERIGEKKQSTPLREL--CAGFP  245 (293)
T ss_dssp             CCHHH-HTTCCCCHHHHHHH--HHHHHHHHHHSSCTT-SSCCSCCHHH--------HHHHHHHHHHHSCHHHH--TTTSC
T ss_pred             cCHHH-hcCCCCChHHHHHH--hhHHHHHHHhCCCcC-CCccchhHHH--------HHHHHHhccCCCChHHh--cCCCC
Confidence            79999 88888999999999  999999999999999 5544332000        00000000011110111  23467


Q ss_pred             HHHHHHHHHHhhhcccccCCHHHHh
Q psy9738          81 QIFQDFLDQCLEEEVETRASASLLL  105 (133)
Q Consensus        81 ~~~~~ll~~~L~~~p~~R~s~~ell  105 (133)
                      +++.+++..|+..+|++||+.+.+.
T Consensus       246 ~~l~~ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         246 EEFYKYMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             HHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHH
Confidence            8899999999999999999876653