Psyllid ID: psy9959

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
Protein Sequence
MEEGPQQLIDLNSSEYQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDINPDPEHVEMKKPQPRPKPKPLSKKLTKSEEEDLTVYDFEEVDEVDPIGEEAPSSEEEDLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAIR
Secondary Structure (PSIPRED)
cccccccccccccccccEEEEEcccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccHHHHHcccccccccccccccccccccccccHHHHccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHcccccHHHHHHHccccccccccccccccccccccccccHHcccccHHHHHHHHcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEccccccccccccccccccccccEEEEccccccccccccccccEccccccEEEEEcccccccccccccccccccccccHHHHcEEcccccccccccccccccccEcccHHcEEcccccccccccccHccccccHHHHHHHHccccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHcccccEccccccEcccHHHHHHHHcEEcccccccccccccccEccccHHHHHHHHcccccccccccEEcccccccccccccccEccccHHHEHHHHcccccccccccccccEccccHHHccc
Coil and Loop (DISEMBL)
meegpqqlidlnsseyqtvtivpsegstgeVSYVLIVQqnetepgqisveqdinpdpehvemkkpqprpkpkplskkltkseeedltvydfeevdevdpigeeapsseeedltvydfeevdevdpigeeapstieedvdekpklsklnkkqvvapahmcnycnytspKRYLLARHLkshseerphkcsvcERGFKTIASLQNHInthtgvkphkckycesrfttsgeLVRHVrykhthekphkcsicDYASVELSKMRNhmrshtgerpyqlhckshegekcwkcelcpyasssqrhLESHMlihtdqkpylcdhcDQIRILICVIIAIR
Flexible Loop (DISEMBL)
MEEGPQQLidlnsseyQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDINPDPehvemkkpqprpkpkplskkltkseeedltvydfeevdevdpigeeapsseeedltvydFEEVDevdpigeeapstieedvdekpklsklnkkqvvapahMCNYCNYTSPKRYLLARHLKShseerphkcsVCERGFKTIASLQNHinthtgvkphkckYCESRFTTSGELVRHVRykhthekphkcsiCDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAIR
Low Complexity Region (SEG)
MEEGPQQLIDLNSSEYQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDINPDPEHVEMkkpqprpkpkplskkltksEEEDLTVYDFEEVDEVDPIGEEAPSSEEEDLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQirilicviiaiR
Disordered region (IsUnstruct)
*****************TVTIV******GEVSYVLIV*****************************************************************************************************************QVVAPAHMCNYCNYTSPKRYLLARHLK*******HKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVEL***************YQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAI*
Disordered Region (DISOPRED)
**EGPQQLIDLN********************************************************************************************PSSEE*****************GEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVI**I*
Disordered Region (DISEMBL)
MEEGPQQLIDLNSSEYQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDINPDPEH************************EDLTVYDFEEVDEVDPIG**********LTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSPKRYLLARHL***********SVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAIR
Disordered Region (DISPRO)
***GPQQLIDLNSSEYQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDINPDPEHVEMKKPQPRPKPKPLSKKLTKSEEEDLTVYDFEEVDEVDPIGEEAPSSEEEDLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILI*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEEGPQQLIDLNSSEYQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDINPDPEHVEMKKPQPRPKPKPLSKKLTKSEEEDLTVYDFEEVDEVDPIGEEAPSSEEEDLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAIR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	330	2.2.26 [Sep-21-2011]
Q08705	728	Transcriptional repressor	yes	N/A	0.578	0.262	0.490	4e-50
Q9R1D1	737	Transcriptional repressor	yes	N/A	0.578	0.259	0.490	5e-50
P49711	727	Transcriptional repressor	yes	N/A	0.578	0.262	0.490	5e-50
Q61164	736	Transcriptional repressor	yes	N/A	0.578	0.259	0.5	6e-50
A2APF3	636	Transcriptional repressor	no	N/A	0.727	0.377	0.394	2e-43
Q8NI51	663	Transcriptional repressor	no	N/A	0.530	0.263	0.468	3e-43
Q96MU6	729	Zinc finger protein 778 O	no	N/A	0.612	0.277	0.336	4e-29
P58317	390	Zinc finger protein 121 O	no	N/A	0.442	0.374	0.4	3e-28
Q9NW07	568	Zinc finger protein 358 O	no	N/A	0.806	0.468	0.283	6e-28
Q9NPA5	681	Zinc finger protein 64 ho	no	N/A	0.439	0.212	0.397	2e-27

>sp|Q08705|CTCF_CHICK Transcriptional repressor CTCF OS=Gallus gallus GN=CTCF PE=1 SV=1

 Score =  198 bits (504), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 101/206 (49%), Positives = 130/206 (63%), Gaps = 15/206 (7%)

Query: 111 DLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSPKRY 170
           D++VYDFEE  +   + E     +  ++          KK+ V     C  C+YT P+R 
Sbjct: 222 DVSVYDFEEEQQEGLLSEVNAEKVVGNMKPP--KPTKIKKKGVKKTFQCELCSYTCPRRS 279

Query: 171 LLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVR 230
            L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVR
Sbjct: 280 NLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVR 339

Query: 231 HVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPY 290
           H RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+Q             C LC Y
Sbjct: 340 HRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQ-------------CSLCSY 386

Query: 291 ASSSQRHLESHMLIHTDQKPYLCDHC 316
           AS     L+ HM  H+ +KPY C  C
Sbjct: 387 ASRDTYKLKRHMRTHSGEKPYECYIC 412

Acts as both a transcriptional activator and repressor of the MYC gene.
Gallus gallus (taxid: 9031)

>sp|Q9R1D1|CTCF_RAT Transcriptional repressor CTCF OS=Rattus norvegicus GN=Ctcf PE=2 SV=1

 Score =  198 bits (503), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 101/206 (49%), Positives = 130/206 (63%), Gaps = 15/206 (7%)

Query: 111 DLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSPKRY 170
           D++VYDFEE  +   + E     +  ++          KK+ V     C  C+YT P+R 
Sbjct: 222 DVSVYDFEEEQQEGLLSEVNAEKVVGNMKPP--KPTKIKKKGVKKTFQCELCSYTCPRRS 279

Query: 171 LLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVR 230
            L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVR
Sbjct: 280 NLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVR 339

Query: 231 HVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPY 290
           H RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+Q             C LC Y
Sbjct: 340 HRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQ-------------CSLCSY 386

Query: 291 ASSSQRHLESHMLIHTDQKPYLCDHC 316
           AS     L+ HM  H+ +KPY C  C
Sbjct: 387 ASRDTYKLKRHMRTHSGEKPYECYIC 412

Chromatin binding factor that binds to DNA sequence specific sites. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Acts as transcriptional repressor binding to promoters of vertebrate MYC gene and BAG1 gene. Also binds to the PLK and PIM1 promoters. Acts as a transcriptional activator of APP. Regulates APOA1/C3/A4/A5 gene cluster and controls MHC class II gene expression. Plays an essential role in oocyte and preimplantation embryo development by activating or repressing transcription. Seems to act as tumor suppressor. Plays a critical role in the epigenetic regulation. Participates in the allele-specific gene expression at the imprinted IGF2/H19 gene locus. On the maternal allele, binding within the H19 imprinting control region (ICR) mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to IGF2. Plays a critical role in gene silencing over considerable distances in the genome. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation and maintaining methylation-free zones. Inversely, binding to target sites is prevented by CpG methylation. Plays a important role in chromatin remodeling. Can dimerize when it is bound to different DNA sequences, mediating long-range chromatin looping. Mediates interchromosomal association between IGF2/H19 and WSB1/NF1 and may direct distant DNA segments to a common transcription factory. Causes local loss of histone acetylation and gain of histone methylation in the beta-globin locus, without affecting transcription. When bound to chromatin, it provides an anchor point for nucleosomes positioning. Seems to be essential for homologous X-chromosome pairing. May participate with Tsix in establishing a regulatable epigenetic switch for X chromosome inactivation. May play a role in preventing the propagation of stable methylation at the escape genes from X-inactivation. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites. Regulates asynchronous replication of IGF2/H19.

Rattus norvegicus (taxid: 10116)

>sp|P49711|CTCF_HUMAN Transcriptional repressor CTCF OS=Homo sapiens GN=CTCF PE=1 SV=1

 Score =  198 bits (503), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 101/206 (49%), Positives = 130/206 (63%), Gaps = 15/206 (7%)

Query: 111 DLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSPKRY 170
           D++VYDFEE  +   + E     +  ++          KK+ V     C  C+YT P+R 
Sbjct: 222 DVSVYDFEEEQQEGLLSEVNAEKVVGNMKPP--KPTKIKKKGVKKTFQCELCSYTCPRRS 279

Query: 171 LLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVR 230
            L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVR
Sbjct: 280 NLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVR 339

Query: 231 HVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPY 290
           H RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+Q             C LC Y
Sbjct: 340 HRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQ-------------CSLCSY 386

Query: 291 ASSSQRHLESHMLIHTDQKPYLCDHC 316
           AS     L+ HM  H+ +KPY C  C
Sbjct: 387 ASRDTYKLKRHMRTHSGEKPYECYIC 412

Chromatin binding factor that binds to DNA sequence specific sites. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Acts as transcriptional repressor binding to promoters of vertebrate MYC gene and BAG1 gene. Also binds to the PLK and PIM1 promoters. Acts as a transcriptional activator of APP. Regulates APOA1/C3/A4/A5 gene cluster and controls MHC class II gene expression. Plays an essential role in oocyte and preimplantation embryo development by activating or repressing transcription. Seems to act as tumor suppressor. Plays a critical role in the epigenetic regulation. Participates in the allele-specific gene expression at the imprinted IGF2/H19 gene locus. On the maternal allele, binding within the H19 imprinting control region (ICR) mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to IGF2. Plays a critical role in gene silencing over considerable distances in the genome. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation and maintaining methylation-free zones. Inversely, binding to target sites is prevented by CpG methylation. Plays a important role in chromatin remodeling. Can dimerize when it is bound to different DNA sequences, mediating long-range chromatin looping. Mediates interchromosomal association between IGF2/H19 and WSB1/NF1 and may direct distant DNA segments to a common transcription factory. Causes local loss of histone acetylation and gain of histone methylation in the beta-globin locus, without affecting transcription. When bound to chromatin, it provides an anchor point for nucleosomes positioning. Seems to be essential for homologous X-chromosome pairing. May participate with Tsix in establishing a regulatable epigenetic switch for X chromosome inactivation. May play a role in preventing the propagation of stable methylation at the escape genes from X- inactivation. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites. Regulates asynchronous replication of IGF2/H19.

Homo sapiens (taxid: 9606)

>sp|Q61164|CTCF_MOUSE Transcriptional repressor CTCF OS=Mus musculus GN=Ctcf PE=1 SV=2

 Score =  198 bits (503), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 103/206 (50%), Positives = 132/206 (64%), Gaps = 15/206 (7%)

Query: 111 DLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSPKRY 170
           D++VYDFEE  +   + E     +  ++  KP      KK+ V     C  C+YT P+R 
Sbjct: 222 DVSVYDFEEEQQEGLLSEVNAEKVVGNM--KPPKPTKIKKKGVKKTFQCELCSYTCPRRS 279

Query: 171 LLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVR 230
            L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVR
Sbjct: 280 NLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVR 339

Query: 231 HVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPY 290
           H RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+Q             C LC Y
Sbjct: 340 HRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQ-------------CSLCSY 386

Query: 291 ASSSQRHLESHMLIHTDQKPYLCDHC 316
           AS     L+ HM  H+ +KPY C  C
Sbjct: 387 ASRDTYKLKRHMRTHSGEKPYECYIC 412

Chromatin binding factor that binds to DNA sequence specific sites. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Acts as transcriptional repressor binding to promoters of vertebrate MYC gene and BAG1 gene. Also binds to the PLK and PIM1 promoters. Acts as a transcriptional activator of APP. Regulates APOA1/C3/A4/A5 gene cluster and controls MHC class II gene expression. Plays an essential role in oocyte and preimplantation embryo development by activating or repressing transcription. Seems to act as tumor suppressor. Plays a critical role in the epigenetic regulation. Participates in the allele-specific gene expression at the imprinted IGF2/H19 gene locus. On the maternal allele, binding within the H19 imprinting control region (ICR) mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to IGF2. Plays a critical role in gene silencing over considerable distances in the genome. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation and maintaining methylation-free zones. Inversely, binding to target sites is prevented by CpG methylation. Plays a important role in chromatin remodeling. Can dimerize when it is bound to different DNA sequences, mediating long-range chromatin looping (By similarity). Mediates interchromosomal association between IGF2/H19 and WSB1/NF1 and may direct distant DNA segments to a common transcription factory. Causes local loss of histone acetylation and gain of histone methylation in the beta-globin locus, without affecting transcription. When bound to chromatin, it provides an anchor point for nucleosomes positioning. Seems to be essential for homologous X-chromosome pairing. May participate with Tsix in establishing a regulatable epigenetic switch for X chromosome inactivation. May play a role in preventing the propagation of stable methylation at the escape genes from X-inactivation. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites. Regulates asynchronous replication of IGF2/H19.

Mus musculus (taxid: 10090)

>sp|A2APF3|CTCFL_MOUSE Transcriptional repressor CTCFL OS=Mus musculus GN=Ctcfl PE=1 SV=1

 Score =  176 bits (446), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/266 (39%), Positives = 145/266 (54%), Gaps = 26/266 (9%)

Query: 52  DINPD-PEHVEMKKPQPRPKPKPLSKKLTKSEEEDLTVYDFEEVDEVDPIGEEAPSSEEE 110
           ++ PD  E   +KKP+   K +   +  T   EE L + + +  +  D         +E 
Sbjct: 163 ELTPDLDESTALKKPEEDEKDQLPPQGETDKREERLLLLEMKPKEGKD---------DEI 213

Query: 111 DLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSPKRY 170
            LT+      ++ DP      +++      KPK  +  K +    +  C+ C +TS K  
Sbjct: 214 VLTISHLSLEEQQDPPAANQ-TSVPGAKAAKPKRRRQTKGK--PQSFQCDTCPFTSSKLS 270

Query: 171 LLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVR 230
              RH+K HS ERPH C +C + F+T+  L+NH+NTHTG +PHKC+ C+  F TSGELVR
Sbjct: 271 TFNRHIKIHSNERPHLCHLCLKAFRTVTLLRNHVNTHTGTRPHKCRDCDMAFVTSGELVR 330

Query: 231 HVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPY 290
           H RYKHT+EKP KCS+C YASVE SKM+ H+RSHTGERP+Q             C  C Y
Sbjct: 331 HRRYKHTYEKPFKCSLCKYASVEASKMKRHIRSHTGERPFQ-------------CCQCAY 377

Query: 291 ASSSQRHLESHMLIHTDQKPYLCDHC 316
           AS     L+ HM  H+ +KPY C  C
Sbjct: 378 ASRDSYKLKRHMRTHSGEKPYECPTC 403

Testis-specific DNA binding protein responsible for insulator function, nuclear architecture and transcriptional control, which probably acts by recruiting epigenetic chromatin modifiers. Plays a key role in gene imprinting in male germline, by participating in the establishment of differential methylation at the IGF2/H19 imprinted control region (ICR). Directly binds the unmethylated H19 ICR and recruits the PRMT7 methyltransferase, leading to methylate histone H4 'Arg-3' to form H4R3sme2. This probably leads to recruit de novo DNA methyltransferases at these sites. Seems to act as tumor suppressor. In association with DNMT1 and DNMT3B, involved in activation of BAG1 gene expression by binding to its promoter. Required for dimethylation of H3 lysine 4 (H3K4me2) of MYC and BRCA1 promoters.

Mus musculus (taxid: 10090)

>sp|Q8NI51|CTCFL_HUMAN Transcriptional repressor CTCFL OS=Homo sapiens GN=CTCFL PE=1 SV=2

 Score =  176 bits (445), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 89/190 (46%), Positives = 117/190 (61%), Gaps = 15/190 (7%)

Query: 128 EEAPSTIEEDVDEKPKLSKLNKKQVVAPAHM-CNYCNYTSPKRYLLARHLKSHSEERPHK 186
           E+ P+  + D  EK K +K  +K   A     C+ C +TS +     RH+K+H+ E+PH 
Sbjct: 228 EDQPTAGQADA-EKAKSTKNQRKTKGAKGTFHCDVCMFTSSRMSSFNRHMKTHTSEKPHL 286

Query: 187 CSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI 246
           C +C + F+T+  L+NH+NTHTG +P+KC  C   F TSGELVRH RYKHTHEKP KCS+
Sbjct: 287 CHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHRRYKHTHEKPFKCSM 346

Query: 247 CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHT 306
           C YASVE SK++ H+RSHTGERP+Q             C  C YAS     L+ HM  H+
Sbjct: 347 CKYASVEASKLKRHVRSHTGERPFQ-------------CCQCSYASRDTYKLKRHMRTHS 393

Query: 307 DQKPYLCDHC 316
            +KPY C  C
Sbjct: 394 GEKPYECHIC 403

Testis-specific DNA binding protein responsible for insulator function, nuclear architecture and transcriptional control, which probably acts by recruiting epigenetic chromatin modifiers. Plays a key role in gene imprinting in male germline, by participating in the establishment of differential methylation at the IGF2/H19 imprinted control region (ICR). Directly binds the unmethylated H19 ICR and recruits the PRMT7 methyltransferase, leading to methylate histone H4 'Arg-3' to form H4R3sme2. This probably leads to recruit de novo DNA methyltransferases at these sites (By similarity). Seems to act as tumor suppressor. In association with DNMT1 and DNMT3B, involved in activation of BAG1 gene expression by binding to its promoter. Required for dimethylation of H3 lysine 4 (H3K4me2) of MYC and BRCA1 promoters.

Homo sapiens (taxid: 9606)

>sp|Q96MU6|ZN778_HUMAN Zinc finger protein 778 OS=Homo sapiens GN=ZNF778 PE=2 SV=3

 Score =  129 bits (323), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 107/232 (46%), Gaps = 30/232 (12%)

Query: 116 DFEEVDEVDPIGEEAPSTIEEDVDEKP-----------KLSKLNKKQVVAPA---HMCNY 161
           + EE  +  P+       +     EKP            LS L+K     P    + C  
Sbjct: 282 ELEECGKASPVSSSLTQHVRIHAAEKPCECKECGKAFTGLSGLSKHVQTDPGQKPYECKD 341

Query: 162 CNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESR 221
           C       YLL  H K+H+ E+P  C VC + F+  + L NH+  HTG+KP+ C YC   
Sbjct: 342 CGKACGGFYLLNEHGKTHTREKPFACVVCGKYFRNSSCLNNHVRIHTGIKPYTCSYCGKA 401

Query: 222 FTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQL--------- 272
           FT    L RHVR  HT EKP+ C  C  A    S +  H+R+HTGE+PY+          
Sbjct: 402 FTVRCGLTRHVR-THTGEKPYTCKDCGKAFCTSSGLTEHVRTHTGEKPYECKDCGKSFTV 460

Query: 273 ------HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQ 318
                 H + H GEK ++C+ C  A + +  L  HM  HT +KPY C  C +
Sbjct: 461 SSSLTEHARIHTGEKPYECKQCGKAFTGRSGLTKHMRTHTGEKPYECKDCGK 512

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P58317|ZN121_HUMAN Zinc finger protein 121 OS=Homo sapiens GN=ZNF121 PE=2 SV=2

 Score =  126 bits (316), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 92/160 (57%), Gaps = 14/160 (8%)

Query: 159 CNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC 218
           CN C     + YLL  H K+H+EE+P +C VC + F++ + L+NH   HTG+KP+KCK C
Sbjct: 230 CNECGKAYNRFYLLTEHFKTHTEEKPFECKVCGKSFRSSSCLKNHFRIHTGIKPYKCKEC 289

Query: 219 ESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHE 278
              FT S  L  HV+  HT EKP++C  C  A    S++  H+R+HTGE+PY        
Sbjct: 290 GKAFTVSSSLHNHVKI-HTGEKPYECKDCGKAFATSSQLIEHIRTHTGEKPYI------- 341

Query: 279 GEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQ 318
                 C+ C     +  HL+ H+ IHT +KPY+C+ C +
Sbjct: 342 ------CKECGKTFRASSHLQKHVRIHTGEKPYICNECGK 375

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9NW07|ZN358_HUMAN Zinc finger protein 358 OS=Homo sapiens GN=ZNF358 PE=1 SV=2

 Score =  125 bits (313), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 140/310 (45%), Gaps = 44/310 (14%)

Query: 48  SVEQDINPDPEHVEMKKPQPRPKPKPLSKKLTKSEEEDLTVYDFEEVDE-VDPIGEEAPS 106
           S  +D++P+PE ++     P P P+ L+   T  E+ D +  D E V E +DP   EAP 
Sbjct: 24  SDSEDLDPNPEDLDPVSEDPEPDPEDLN---TVPEDVDPSYEDLEPVSEDLDPD-AEAPG 79

Query: 107 SEEED----LTVYDFEEVDEVDPI-------------GEEAPSTIEEDVDEKPKLSKLNK 149
           SE +D     + +D +  D + P+             G+     I   +   P++   + 
Sbjct: 80  SEPQDPDPMSSSFDLDP-DVIGPVPLILDPNSDTLSPGDPKVDPISSGLTATPQVLATSP 138

Query: 150 KQVVAPA-----HMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHI 204
             + APA       C  C     +   L++H ++HS E+P++C  C + F   A+L  H 
Sbjct: 139 AVLPAPASPPRPFSCPDCGRAFRRSSGLSQHRRTHSGEKPYRCPDCGKSFSHGATLAQHR 198

Query: 205 NTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSH 264
             HTG +P++C  C   F     L++H R  H+ EKPH C +C  A    S +  H+R+H
Sbjct: 199 GIHTGARPYQCAACGKAFGWRSTLLKH-RSSHSGEKPHHCPVCGKAFGHGSLLAQHLRTH 257

Query: 265 TGERPYQL---------------HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQK 309
            G RP++                H ++H GE+ + C  C  A      L  H   HT ++
Sbjct: 258 GGPRPHKCPVCAKGFGQGSALLKHLRTHTGERPYPCPQCGKAFGQSSALLQHQRTHTAER 317

Query: 310 PYLCDHCDQI 319
           PY C HC + 
Sbjct: 318 PYRCPHCGKA 327

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9NPA5|ZF64A_HUMAN Zinc finger protein 64 homolog, isoforms 1 and 2 OS=Homo sapiens GN=ZFP64 PE=1 SV=3

 Score =  123 bits (309), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 90/161 (55%), Gaps = 16/161 (9%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 231
           + RHLK H+ ++PHKC VC + F     L+ H+  HTGVKP+KCK C+     S  L +H
Sbjct: 162 MERHLKIHTGDKPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH 221

Query: 232 VRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQL---------------HCKS 276
           +R  H+ E+P KC IC YAS   S++  H+RSHTG+ P+Q                H + 
Sbjct: 222 LRI-HSDERPFKCQICPYASRNSSQLTVHLRSHTGDAPFQCWLCSAKFKISSDLKRHMRV 280

Query: 277 HEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCD 317
           H GEK +KCE C    + + +L+SH+ I      + C HCD
Sbjct: 281 HSGEKPFKCEFCNVRCTMKGNLKSHIRIKHSGNNFKCPHCD 321

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	330
242022342	785	zinc finger protein, putative [Pediculus	0.790	0.332	0.510	2e-77
321456217	700	putative CCCTC-binding factor protein [D	0.818	0.385	0.496	7e-77
345495056	709	PREDICTED: transcriptional repressor CTC	0.721	0.335	0.533	7e-77
380019440	718	PREDICTED: transcriptional repressor CTC	0.751	0.345	0.514	2e-75
332021814	731	Transcriptional repressor CTCF [Acromyrm	0.781	0.352	0.532	3e-75
383860283	716	PREDICTED: transcriptional repressor CTC	0.751	0.346	0.517	4e-75
427795365	916	Putative transcriptional repressor ctcf,	0.842	0.303	0.504	1e-74
340716607	727	PREDICTED: transcriptional repressor CTC	0.748	0.339	0.518	3e-74
427788693	875	Putative transcriptional repressor ctcf	0.733	0.276	0.501	3e-72
350404458	752	PREDICTED: hypothetical protein LOC10074	0.751	0.329	0.504	3e-72

>gi|242022342|ref|XP_002431599.1| zinc finger protein, putative [Pediculus humanus corporis] gi|212516907|gb|EEB18861.1| zinc finger protein, putative [Pediculus humanus corporis]

 Score =  295 bits (756), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 163/319 (51%), Positives = 201/319 (63%), Gaps = 58/319 (18%)

Query: 3   EGPQQLIDLNSSE--YQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDINPDPEHV 60
           EG  Q++ LN++E  Y TVT++P + STGE+SYVLIVQ +                 E  
Sbjct: 143 EGSNQMV-LNTTEGSYGTVTLMPQDTSTGELSYVLIVQPSAGN--------------EKT 187

Query: 61  EMKKPQPRPKPKPLSKKLTKSEEEDLTVYDFEEVDEVDPIGEEAPSSEEEDLTVYDFEEV 120
           E  + Q +P    +       +++DLTVYDF+                       D EE 
Sbjct: 188 ETMEKQTKPF---VVGSGENEQDQDLTVYDFD-----------------------DGEEN 221

Query: 121 DEVDPIGEEAPSTIEEDVDEKPKLSKL---NKKQVVAPAHMCNYCNYTSPKRYLLARHLK 177
           +E+DP+         E+ D+K K+ K+    K Q ++  HMCNYCNYTSPKRYLL+RH+K
Sbjct: 222 NEMDPLE-------SENEDDKSKIGKVVPTKKSQTISTTHMCNYCNYTSPKRYLLSRHMK 274

Query: 178 SHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHT 237
           SHSEERPHKCSVCERGFKT+ASLQNH+NTHTG KPH CK+C+S FTTSGELVRHVRYKHT
Sbjct: 275 SHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHHCKFCDSAFTTSGELVRHVRYKHT 334

Query: 238 HEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRH 297
           HEKPH+C  CDYASVELSK++ H+R HTGERPYQ     H  EK  KC LC YAS     
Sbjct: 335 HEKPHRCPECDYASVELSKLKRHIRCHTGERPYQ-----HTHEKPHKCSLCDYASVELSK 389

Query: 298 LESHMLIHTDQKPYLCDHC 316
           L +H   HT ++PY C HC
Sbjct: 390 LRNHFRCHTGERPYQCQHC 408

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321456217|gb|EFX67330.1| putative CCCTC-binding factor protein [Daphnia pulex]

 Score =  293 bits (750), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 159/320 (49%), Positives = 202/320 (63%), Gaps = 50/320 (15%)

Query: 16  YQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDINPDPEHVEMKKPQPRPKPKPLS 75
           YQTVTI+P E S+GEVSYVLIVQQ +    Q  +  ++    E   +++ +     +   
Sbjct: 114 YQTVTILPPESSSGEVSYVLIVQQPDGAE-QAVISSEVLDGTEGEVIQEDEEAEDDENFD 172

Query: 76  KKLTKSEEEDLTVYDFEEVDEVDPIGEEAPSSEEEDLTVYDFEEVDEVDPIGEEAPSTIE 135
               K E+++L VYDF+E       GEE  S++ +D                        
Sbjct: 173 GDEDKDEDQNLAVYDFDE-------GEEGGSADGQD-----------------------S 202

Query: 136 EDVDEKPKLSKLNKK---QVVAPAHMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCER 192
           ED D KP++SK   K   Q V+ AHMCNYCNYTSPKRYLL+RH+K HSEERPHKCSVC+R
Sbjct: 203 EDEDIKPRMSKGGSKKVTQTVSQAHMCNYCNYTSPKRYLLSRHMKCHSEERPHKCSVCDR 262

Query: 193 GFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASV 252
           GFKT+ASLQNH+NTHTG KPH+CK+C S FTTSGELVRHVRY+HTHEKPH+C+ CDYASV
Sbjct: 263 GFKTLASLQNHVNTHTGTKPHRCKHCHSSFTTSGELVRHVRYRHTHEKPHRCTECDYASV 322

Query: 253 ELSKMRNHMRSHTGERPYQL---------------HCKSHEGEKCWKCELCPYASSSQRH 297
           ELSK++ HMR HTGERPYQ                H + H GEK ++C++C    +    
Sbjct: 323 ELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNS 382

Query: 298 LESHMLIHTDQKP-YLCDHC 316
           L++H LIHT  KP + C+ C
Sbjct: 383 LKAHKLIHTGNKPIFQCELC 402

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345495056|ref|XP_001606075.2| PREDICTED: transcriptional repressor CTCFL-like [Nasonia vitripennis]

 Score =  293 bits (750), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 166/311 (53%), Positives = 196/311 (63%), Gaps = 73/311 (23%)

Query: 11  LNSSE-YQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDINPDPEHVEMKKPQPRP 69
           LNS E YQTVTIVPS+ + GEVSYVLIVQQ               PD E  E K      
Sbjct: 125 LNSGEAYQTVTIVPSDSNPGEVSYVLIVQQ---------------PDGEKSERK------ 163

Query: 70  KPKPLSKKLTKSEEEDLTVYDFEEVDEVDPIGEEAPSSEEEDLTVYDFEEVDEVDPIGEE 129
                                   ++  +  GE+     E+DLTVYDFE+ ++ D     
Sbjct: 164 ------------------------IENENGEGEDG----EQDLTVYDFEDNEDND----- 190

Query: 130 APSTIEEDV-DEKPKLSKL--NKKQVVAPAHMCNYCNYTSPKRYLLARHLKSHSEERPHK 186
             + IE +V D+K K+ K    K Q V+ AHMCNYCNYTSPKRYLL+RH+KSHSEERPHK
Sbjct: 191 --AAIESEVEDDKTKIVKFIPKKSQTVSQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHK 248

Query: 187 CSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI 246
           CSVCERGFKT+ASLQNH+NTHTG KPH CK+C+S FTTSGELVRHVRY+HTHEKPHKC+ 
Sbjct: 249 CSVCERGFKTLASLQNHVNTHTGTKPHNCKFCDSAFTTSGELVRHVRYRHTHEKPHKCND 308

Query: 247 CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHT 306
           CDYASVELSK++ H+R HTGERPYQ             C  C YAS     L+ H+ IHT
Sbjct: 309 CDYASVELSKLKRHIRCHTGERPYQ-------------CPHCTYASPDTFKLKRHLRIHT 355

Query: 307 DQKPYLCDHCD 317
            +KPY CD C+
Sbjct: 356 GEKPYECDICN 366

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380019440|ref|XP_003693613.1| PREDICTED: transcriptional repressor CTCFL-like [Apis florea]

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 162/315 (51%), Positives = 192/315 (60%), Gaps = 67/315 (21%)

Query: 4   GPQQLIDLNSSEYQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDINPDPEHVEMK 63
           G  Q++  +   YQTVTIVPS+ + GEVSYVLIVQQ               PD E  +  
Sbjct: 124 GNNQVVINSGDAYQTVTIVPSDTNPGEVSYVLIVQQ---------------PDAEDKD-- 166

Query: 64  KPQPRPKPKPLSKKLTKSEEEDLTVYDFEEVDEVDPIGEEAPSSEEEDLTVYDFEEVDEV 123
               RP  +  ++      E+DLTVYDFE+ ++      EAP   E +            
Sbjct: 167 ---SRPVEREGTEGEEGEGEQDLTVYDFEDNED-----NEAPVESEAE------------ 206

Query: 124 DPIGEEAPSTIEEDVDEKPKLSKL--NKKQVVAPAHMCNYCNYTSPKRYLLARHLKSHSE 181
                          D+K K+ K    K Q V  AHMCNYCNYTSPKRYLL+RH+KSHSE
Sbjct: 207 ---------------DDKTKIIKFLPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSE 251

Query: 182 ERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 241
           ERPHKCSVCERGFKT+ASLQNH+NTHTG KPH+CK+C+S FTTSGELVRHVRY+HTHEKP
Sbjct: 252 ERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKP 311

Query: 242 HKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESH 301
           HKC  CDYASVELSK++ H+R HTGERPYQ             C  C YAS     L+ H
Sbjct: 312 HKCHECDYASVELSKLKRHIRCHTGERPYQ-------------CPHCTYASPDTFKLKRH 358

Query: 302 MLIHTDQKPYLCDHC 316
           + IHT +KPY CD C
Sbjct: 359 LRIHTGEKPYECDFC 373

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021814|gb|EGI62160.1| Transcriptional repressor CTCF [Acromyrmex echinatior]

 Score =  288 bits (736), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 166/312 (53%), Positives = 191/312 (61%), Gaps = 54/312 (17%)

Query: 7   QLIDLNSSEYQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDINPDPEHVEMKKPQ 66
           Q++  +   YQTVTIVPS+ + GEVSYVLIVQQ ETE                      +
Sbjct: 127 QVVINSGDAYQTVTIVPSDTNPGEVSYVLIVQQPETE----------------------E 164

Query: 67  PRPKPKPLSKKLTKSEEEDLTVYDFEEVDEVDPIGEEAPSSEEEDLTVYDFEEVDEVDPI 126
              KP            ED                E   +  E+DLTVYDFE+ ++    
Sbjct: 165 KESKPT-----------EDDATTVAVAAAAAAAPAEGEEAEGEQDLTVYDFEDNED---- 209

Query: 127 GEEAPSTIEEDVDEKPKLSKL--NKKQVVAPAHMCNYCNYTSPKRYLLARHLKSHSEERP 184
             EAP   E + D+K K+ K    K Q V  AHMCNYCNYTSPKRYLL+RH+KSHSEERP
Sbjct: 210 -NEAPVESETE-DDKTKIIKFLPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERP 267

Query: 185 HKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKC 244
           HKCSVCERGFKT+ASLQNH+NTHTG KPH CKYCES FTTSGELVRHVRY+HTHEKPHKC
Sbjct: 268 HKCSVCERGFKTLASLQNHVNTHTGTKPHHCKYCESAFTTSGELVRHVRYRHTHEKPHKC 327

Query: 245 SICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLI 304
             CDYASVELSK++ H+R HTGERPYQ             C  C YAS     L+ H+ I
Sbjct: 328 HECDYASVELSKLKRHIRCHTGERPYQ-------------CPHCTYASPDTFKLKRHLRI 374

Query: 305 HTDQKPYLCDHC 316
           HT +KPY CD C
Sbjct: 375 HTGEKPYECDFC 386

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383860283|ref|XP_003705620.1| PREDICTED: transcriptional repressor CTCFL-like [Megachile rotundata]

 Score =  288 bits (736), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 163/315 (51%), Positives = 191/315 (60%), Gaps = 67/315 (21%)

Query: 4   GPQQLIDLNSSEYQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDINPDPEHVEMK 63
           G  Q++  +   YQTVTIVPS+ + GEVSYVLIVQQ               PD E  E  
Sbjct: 125 GNNQVVINSGDAYQTVTIVPSDTNPGEVSYVLIVQQ---------------PDSEDKE-- 167

Query: 64  KPQPRPKPKPLSKKLTKSEEEDLTVYDFEEVDEVDPIGEEAPSSEEEDLTVYDFEEVDEV 123
               RP  +  ++      E+DLTVYDFE+ ++      EAP   E +            
Sbjct: 168 ---SRPVEREGTEGEEGEGEQDLTVYDFEDNED-----NEAPVESEAE------------ 207

Query: 124 DPIGEEAPSTIEEDVDEKPKLSKL--NKKQVVAPAHMCNYCNYTSPKRYLLARHLKSHSE 181
                          D+K K+ K    K Q V  AHMCNYCNYTSPKRYLL+RH+KSHSE
Sbjct: 208 ---------------DDKTKIIKFLPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSE 252

Query: 182 ERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 241
           ERPHKCSVCERGFKT+ASLQNH+NTHTG KPH CK+C+S FTTSGELVRHVRY+HTHEKP
Sbjct: 253 ERPHKCSVCERGFKTLASLQNHVNTHTGTKPHHCKFCDSAFTTSGELVRHVRYRHTHEKP 312

Query: 242 HKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESH 301
           HKC  CDYASVELSK++ H+R HTGERPYQ             C  C YAS     L+ H
Sbjct: 313 HKCHECDYASVELSKLKRHIRCHTGERPYQ-------------CPHCTYASPDTFKLKRH 359

Query: 302 MLIHTDQKPYLCDHC 316
           + IHT +KPY CD C
Sbjct: 360 LRIHTGEKPYECDFC 374

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427795365|gb|JAA63134.1| Putative transcriptional repressor ctcf, partial [Rhipicephalus pulchellus]

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 161/319 (50%), Positives = 196/319 (61%), Gaps = 41/319 (12%)

Query: 6   QQLIDLNSSEYQTVTIVPSEGSTGEVSYVLIVQQ-NETEPGQISVEQDINPDPEHVEMKK 64
           QQ+I    + YQTVTIVPS+ + GEVSYVLIV Q +E++      + D++    H     
Sbjct: 232 QQVILNTGNSYQTVTIVPSDTNPGEVSYVLIVSQPDESKEDLAKADMDMSVYDFHEGGDX 291

Query: 65  PQPRPKPKPLSKKLTKSE----EEDLTVYDFEEVDEVDPIGEEAPSSEEEDLTVYDFEEV 120
                 P  +S  L  S+    +EDL   D                    D++VYDF E 
Sbjct: 292 XXXXTNPGEVSYVLIVSQPDESKEDLAKADM-------------------DMSVYDFHEG 332

Query: 121 DE---VDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSPKRYLLARHLK 177
            +    + + EEA ST E     +       K Q V  AHMCNYCNYTSPKRYLL+RH+K
Sbjct: 333 GDKTGAEVVAEEA-STPEPVAKMRTIKIAPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMK 391

Query: 178 SHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHT 237
           SHSEERPHKCSVCERGFKT+ASLQNH+NTHTG +PH+CK C++ FTTSGELVRHVRY+HT
Sbjct: 392 SHSEERPHKCSVCERGFKTLASLQNHVNTHTGTRPHQCKECDAAFTTSGELVRHVRYRHT 451

Query: 238 HEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRH 297
           HEKPH+C+ CDYASVELSK++ HMR HTGERPYQ             C  C YAS     
Sbjct: 452 HEKPHRCTECDYASVELSKLKRHMRCHTGERPYQ-------------CPHCTYASPDTYK 498

Query: 298 LESHMLIHTDQKPYLCDHC 316
           L+ H+ IHT +KPY CD C
Sbjct: 499 LKRHLRIHTGEKPYECDVC 517

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340716607|ref|XP_003396788.1| PREDICTED: transcriptional repressor CTCFL-like [Bombus terrestris]

 Score =  285 bits (728), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 164/316 (51%), Positives = 197/316 (62%), Gaps = 69/316 (21%)

Query: 4   GPQQLIDLNSSEYQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDINPDPEHVEMK 63
           G  +++  +   YQTVTIVPS+ + GEVSYVLIVQQ               PD E  E  
Sbjct: 125 GNNEVVINSGDAYQTVTIVPSDTNPGEVSYVLIVQQ---------------PDAEDKE-- 167

Query: 64  KPQPRPKPKPLSKKLTKSEEEDLTVYDFEEVDEVDPIGEEAPSSEEEDLTVYDFEEVDEV 123
                   KP++++ T+ EE                         E+DLTVYDFE+ ++ 
Sbjct: 168 -------SKPIAREGTEGEE----------------------GEGEQDLTVYDFEDNEDN 198

Query: 124 D-PIGEEAPSTIEEDVDEKPKLSKL--NKKQVVAPAHMCNYCNYTSPKRYLLARHLKSHS 180
           + P+  EA        D+K K+ K+   K Q V  AHMCNYCNYTSPKRYLL+RH+KSHS
Sbjct: 199 EVPVESEAE-------DDKTKIVKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHS 251

Query: 181 EERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEK 240
           EERPHKCSVCERGFKT+ASLQNH+NTHTG KPH CK+C+S FTTSGELVRHVRY+HTHEK
Sbjct: 252 EERPHKCSVCERGFKTLASLQNHVNTHTGTKPHHCKFCDSAFTTSGELVRHVRYRHTHEK 311

Query: 241 PHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLES 300
           PHKC  CDYASVELSK++ H+R HTGERPYQ             C  C YAS     L+ 
Sbjct: 312 PHKCHECDYASVELSKLKRHIRCHTGERPYQ-------------CPHCTYASPDTFKLKR 358

Query: 301 HMLIHTDQKPYLCDHC 316
           H+ IHT +KPY CD C
Sbjct: 359 HLRIHTGEKPYECDFC 374

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427788693|gb|JAA59798.1| Putative transcriptional repressor ctcf [Rhipicephalus pulchellus]

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 156/311 (50%), Positives = 185/311 (59%), Gaps = 69/311 (22%)

Query: 6   QQLIDLNSSEYQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDINPDPEHVEMKKP 65
           QQ+I    + YQTVTIVPS+ + GEVSYVLIV Q               PD    ++ K 
Sbjct: 235 QQVILNTGNSYQTVTIVPSDTNPGEVSYVLIVSQ---------------PDESKEDLAK- 278

Query: 66  QPRPKPKPLSKKLTKSEEEDLTVYDFEEVDEVDPIGEEAPSSEEEDLTVYDFEEVDEVDP 125
                            + D++VYDF E    D  G E  +           EE    +P
Sbjct: 279 ----------------ADMDMSVYDFHEGG--DKTGAEVVA-----------EEASTPEP 309

Query: 126 IGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSPKRYLLARHLKSHSEERPH 185
           + +     I       PK     K Q V  AHMCNYCNYTSPKRYLL+RH+KSHSEERPH
Sbjct: 310 VAKMRTIKI------APK-----KSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPH 358

Query: 186 KCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           KCSVCERGFKT+ASLQNH+NTHTG +PH+CK C++ FTTSGELVRHVRY+HTHEKPH+C+
Sbjct: 359 KCSVCERGFKTLASLQNHVNTHTGTRPHQCKECDAAFTTSGELVRHVRYRHTHEKPHRCT 418

Query: 246 ICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIH 305
            CDYASVELSK++ HMR HTGERPYQ             C  C YAS     L+ H+ IH
Sbjct: 419 ECDYASVELSKLKRHMRCHTGERPYQ-------------CPHCTYASPDTYKLKRHLRIH 465

Query: 306 TDQKPYLCDHC 316
           T +KPY CD C
Sbjct: 466 TGEKPYECDVC 476

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350404458|ref|XP_003487111.1| PREDICTED: hypothetical protein LOC100745727 [Bombus impatiens]

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 159/315 (50%), Positives = 188/315 (59%), Gaps = 67/315 (21%)

Query: 4   GPQQLIDLNSSEYQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDINPDPEHVEMK 63
           G  +++  +   YQTVTIVPS+ +  EVSYVLIVQQ               PD E     
Sbjct: 125 GNNEVVINSGDPYQTVTIVPSDTNPAEVSYVLIVQQ---------------PDDE----- 164

Query: 64  KPQPRPKPKPLSKKLTKSEEEDLTVYDFEEVDEVDPIGEEAPSSEEEDLTVYDFEEVDEV 123
               R   +  ++      E+DLTVYDFE+ ++      E P   E +            
Sbjct: 165 DKGSRLVEQEGTEGEEGKGEQDLTVYDFEDNED-----NEVPVESEVE------------ 207

Query: 124 DPIGEEAPSTIEEDVDEKPKLSKL--NKKQVVAPAHMCNYCNYTSPKRYLLARHLKSHSE 181
                          D+K K+ K+   K Q V  AHMCNYCNYTSPKRYLL+RH+KSHSE
Sbjct: 208 ---------------DDKTKIVKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSE 252

Query: 182 ERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 241
           ERPHKCSVCERGFKT+ASLQNH+NTHTG KPH+CK+CES FTTSGELVRHVRY+HTHEKP
Sbjct: 253 ERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCESAFTTSGELVRHVRYRHTHEKP 312

Query: 242 HKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESH 301
           HKC  CDYASVELSK+  H+R HTGERPYQ             C  C YAS     L+ H
Sbjct: 313 HKCPECDYASVELSKLHRHIRCHTGERPYQ-------------CPHCTYASPDTFKLKRH 359

Query: 302 MLIHTDQKPYLCDHC 316
           + IHT +KPY CD C
Sbjct: 360 LRIHTGEKPYECDFC 374

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	330
UNIPROTKB|F1NFT1	728	CTCF "Transcriptional represso	0.587	0.266	0.497	1.1e-53
UNIPROTKB|Q08705	728	CTCF "Transcriptional represso	0.587	0.266	0.497	1.1e-53
UNIPROTKB|Q08DH9	727	CTCF "Uncharacterized protein"	0.587	0.266	0.497	1.1e-53
UNIPROTKB|E2RJR9	728	CTCF "Uncharacterized protein"	0.587	0.266	0.497	1.1e-53
UNIPROTKB|P49711	727	CTCF "Transcriptional represso	0.587	0.266	0.497	1.1e-53
MGI|MGI:109447	736	Ctcf "CCCTC-binding factor" [M	0.587	0.263	0.497	1.1e-53
RGD|621344	737	Ctcf "CCCTC-binding factor (zi	0.587	0.263	0.497	1.1e-53
UNIPROTKB|Q9R1D1	737	Ctcf "Transcriptional represso	0.587	0.263	0.497	1.1e-53
UNIPROTKB|I3LDG5	722	CTCF "Uncharacterized protein"	0.587	0.268	0.497	1.1e-53
ZFIN|ZDB-GENE-040624-5	798	ctcf "CCCTC-binding factor (zi	0.587	0.243	0.497	1.5e-53

UNIPROTKB|F1NFT1 CTCF "Transcriptional repressor CTCF" [Gallus gallus (taxid:9031)]

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 104/209 (49%), Positives = 137/209 (65%)

Query:   108 EEEDLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSP 167
             ++ D++VYDFEE  +   + E     +  ++ + PK +K+ KK V      C  C+YT P
Sbjct:   219 KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNM-KPPKPTKIKKKGV-KKTFQCELCSYTCP 276

Query:   168 KRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGE 227
             +R  L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGE
Sbjct:   277 RRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGE 336

Query:   228 LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL 287
             LVRH RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+Q             C L
Sbjct:   337 LVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQ-------------CSL 383

Query:   288 CPYASSSQRHLESHMLIHTDQKPYLCDHC 316
             C YAS     L+ HM  H+ +KPY C  C
Sbjct:   384 CSYASRDTYKLKRHMRTHSGEKPYECYIC 412

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q08705 CTCF "Transcriptional repressor CTCF" [Gallus gallus (taxid:9031)]

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 104/209 (49%), Positives = 137/209 (65%)

Query:   108 EEEDLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSP 167
             ++ D++VYDFEE  +   + E     +  ++ + PK +K+ KK V      C  C+YT P
Sbjct:   219 KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNM-KPPKPTKIKKKGV-KKTFQCELCSYTCP 276

Query:   168 KRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGE 227
             +R  L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGE
Sbjct:   277 RRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGE 336

Query:   228 LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL 287
             LVRH RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+Q             C L
Sbjct:   337 LVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQ-------------CSL 383

Query:   288 CPYASSSQRHLESHMLIHTDQKPYLCDHC 316
             C YAS     L+ HM  H+ +KPY C  C
Sbjct:   384 CSYASRDTYKLKRHMRTHSGEKPYECYIC 412

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q08DH9 CTCF "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 104/209 (49%), Positives = 137/209 (65%)

Query:   108 EEEDLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSP 167
             ++ D++VYDFEE  +   + E     +  ++ + PK +K+ KK V      C  C+YT P
Sbjct:   219 KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNM-KPPKPTKIKKKGV-KKTFQCELCSYTCP 276

Query:   168 KRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGE 227
             +R  L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGE
Sbjct:   277 RRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGE 336

Query:   228 LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL 287
             LVRH RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+Q             C L
Sbjct:   337 LVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQ-------------CSL 383

Query:   288 CPYASSSQRHLESHMLIHTDQKPYLCDHC 316
             C YAS     L+ HM  H+ +KPY C  C
Sbjct:   384 CSYASRDTYKLKRHMRTHSGEKPYECYIC 412

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0043035 "chromatin insulator sequence binding" evidence=IEA

GO:0040030 "regulation of molecular function, epigenetic" evidence=IEA

GO:0035065 "regulation of histone acetylation" evidence=IEA

GO:0031060 "regulation of histone methylation" evidence=IEA

GO:0016584 "nucleosome positioning" evidence=IEA

GO:0010216 "maintenance of DNA methylation" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0000793 "condensed chromosome" evidence=IEA

GO:0000775 "chromosome, centromeric region" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2RJR9 CTCF "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 104/209 (49%), Positives = 137/209 (65%)

Query:   108 EEEDLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSP 167
             ++ D++VYDFEE  +   + E     +  ++ + PK +K+ KK V      C  C+YT P
Sbjct:   219 KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNM-KPPKPTKIKKKGV-KKTFQCELCSYTCP 276

Query:   168 KRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGE 227
             +R  L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGE
Sbjct:   277 RRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGE 336

Query:   228 LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL 287
             LVRH RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+Q             C L
Sbjct:   337 LVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQ-------------CSL 383

Query:   288 CPYASSSQRHLESHMLIHTDQKPYLCDHC 316
             C YAS     L+ HM  H+ +KPY C  C
Sbjct:   384 CSYASRDTYKLKRHMRTHSGEKPYECYIC 412

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0043035 "chromatin insulator sequence binding" evidence=IEA

GO:0040030 "regulation of molecular function, epigenetic" evidence=IEA

GO:0035065 "regulation of histone acetylation" evidence=IEA

GO:0031060 "regulation of histone methylation" evidence=IEA

GO:0016584 "nucleosome positioning" evidence=IEA

GO:0010216 "maintenance of DNA methylation" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0000793 "condensed chromosome" evidence=IEA

GO:0000775 "chromosome, centromeric region" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|P49711 CTCF "Transcriptional repressor CTCF" [Homo sapiens (taxid:9606)]

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 104/209 (49%), Positives = 137/209 (65%)

Query:   108 EEEDLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSP 167
             ++ D++VYDFEE  +   + E     +  ++ + PK +K+ KK V      C  C+YT P
Sbjct:   219 KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNM-KPPKPTKIKKKGV-KKTFQCELCSYTCP 276

Query:   168 KRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGE 227
             +R  L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGE
Sbjct:   277 RRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGE 336

Query:   228 LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL 287
             LVRH RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+Q             C L
Sbjct:   337 LVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQ-------------CSL 383

Query:   288 CPYASSSQRHLESHMLIHTDQKPYLCDHC 316
             C YAS     L+ HM  H+ +KPY C  C
Sbjct:   384 CSYASRDTYKLKRHMRTHSGEKPYECYIC 412

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0007059 "chromosome segregation" evidence=IEA

GO:0016568 "chromatin modification" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0010216 "maintenance of DNA methylation" evidence=IEA

GO:0031060 "regulation of histone methylation" evidence=IEA

GO:0035065 "regulation of histone acetylation" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0008270 "zinc ion binding" evidence=TAS

GO:0005730 "nucleolus" evidence=IDA

GO:0005654 "nucleoplasm" evidence=IDA

GO:0000793 "condensed chromosome" evidence=IDA

GO:0000775 "chromosome, centromeric region" evidence=IDA

GO:0070602 "regulation of centromeric sister chromatid cohesion" evidence=NAS

GO:0010628 "positive regulation of gene expression" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP;IDA

GO:0016584 "nucleosome positioning" evidence=IDA

GO:0043035 "chromatin insulator sequence binding" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0040029 "regulation of gene expression, epigenetic" evidence=IMP

GO:0040030 "regulation of molecular function, epigenetic" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0003714 "transcription corepressor activity" evidence=TAS

MGI|MGI:109447 Ctcf "CCCTC-binding factor" [Mus musculus (taxid:10090)]

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 104/209 (49%), Positives = 137/209 (65%)

Query:   108 EEEDLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSP 167
             ++ D++VYDFEE  +   + E     +  ++ + PK +K+ KK V      C  C+YT P
Sbjct:   219 KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNM-KPPKPTKIKKKGV-KKTFQCELCSYTCP 276

Query:   168 KRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGE 227
             +R  L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGE
Sbjct:   277 RRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGE 336

Query:   228 LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL 287
             LVRH RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+Q             C L
Sbjct:   337 LVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQ-------------CSL 383

Query:   288 CPYASSSQRHLESHMLIHTDQKPYLCDHC 316
             C YAS     L+ HM  H+ +KPY C  C
Sbjct:   384 CSYASRDTYKLKRHMRTHSGEKPYECYIC 412

GO:0000775 "chromosome, centromeric region" evidence=ISO

GO:0000793 "condensed chromosome" evidence=ISO

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005654 "nucleoplasm" evidence=ISO

GO:0005694 "chromosome" evidence=IEA

GO:0005730 "nucleolus" evidence=ISO

GO:0006306 "DNA methylation" evidence=IDA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IMP;IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0007059 "chromosome segregation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009048 "dosage compensation by inactivation of X chromosome" evidence=TAS

GO:0010216 "maintenance of DNA methylation" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=ISO;IMP

GO:0010629 "negative regulation of gene expression" evidence=IMP

GO:0016568 "chromatin modification" evidence=IEA

GO:0016584 "nucleosome positioning" evidence=ISO

GO:0031060 "regulation of histone methylation" evidence=IMP

GO:0035065 "regulation of histone acetylation" evidence=IMP

GO:0040029 "regulation of gene expression, epigenetic" evidence=ISO

GO:0040030 "regulation of molecular function, epigenetic" evidence=ISO

GO:0043035 "chromatin insulator sequence binding" evidence=ISO

GO:0043565 "sequence-specific DNA binding" evidence=ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

RGD|621344 Ctcf "CCCTC-binding factor (zinc finger protein)" [Rattus norvegicus (taxid:10116)]

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 104/209 (49%), Positives = 137/209 (65%)

Query:   108 EEEDLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSP 167
             ++ D++VYDFEE  +   + E     +  ++ + PK +K+ KK V      C  C+YT P
Sbjct:   219 KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNM-KPPKPTKIKKKGV-KKTFQCELCSYTCP 276

Query:   168 KRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGE 227
             +R  L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGE
Sbjct:   277 RRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGE 336

Query:   228 LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL 287
             LVRH RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+Q             C L
Sbjct:   337 LVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQ-------------CSL 383

Query:   288 CPYASSSQRHLESHMLIHTDQKPYLCDHC 316
             C YAS     L+ HM  H+ +KPY C  C
Sbjct:   384 CSYASRDTYKLKRHMRTHSGEKPYECYIC 412

GO:0000775 "chromosome, centromeric region" evidence=IEA;ISO

GO:0000793 "condensed chromosome" evidence=IEA;ISO

GO:0003677 "DNA binding" evidence=ISO;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISO;TAS

GO:0005634 "nucleus" evidence=ISO

GO:0005654 "nucleoplasm" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0006306 "DNA methylation" evidence=ISO

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA;ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISO

GO:0007059 "chromosome segregation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010216 "maintenance of DNA methylation" evidence=IEA;ISO

GO:0010628 "positive regulation of gene expression" evidence=ISO

GO:0010629 "negative regulation of gene expression" evidence=ISO

GO:0016568 "chromatin modification" evidence=IEA

GO:0016584 "nucleosome positioning" evidence=IEA;ISO

GO:0031060 "regulation of histone methylation" evidence=IEA;ISO

GO:0035065 "regulation of histone acetylation" evidence=IEA;ISO

GO:0040029 "regulation of gene expression, epigenetic" evidence=ISO

GO:0040030 "regulation of molecular function, epigenetic" evidence=IEA;ISO

GO:0043035 "chromatin insulator sequence binding" evidence=IEA;ISO

GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA;ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA;ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA;ISO

UNIPROTKB|Q9R1D1 Ctcf "Transcriptional repressor CTCF" [Rattus norvegicus (taxid:10116)]

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 104/209 (49%), Positives = 137/209 (65%)

Query:   108 EEEDLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSP 167
             ++ D++VYDFEE  +   + E     +  ++ + PK +K+ KK V      C  C+YT P
Sbjct:   219 KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNM-KPPKPTKIKKKGV-KKTFQCELCSYTCP 276

Query:   168 KRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGE 227
             +R  L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGE
Sbjct:   277 RRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGE 336

Query:   228 LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL 287
             LVRH RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+Q             C L
Sbjct:   337 LVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQ-------------CSL 383

Query:   288 CPYASSSQRHLESHMLIHTDQKPYLCDHC 316
             C YAS     L+ HM  H+ +KPY C  C
Sbjct:   384 CSYASRDTYKLKRHMRTHSGEKPYECYIC 412

GO:0000793 "condensed chromosome" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010216 "maintenance of DNA methylation" evidence=IEA

GO:0016584 "nucleosome positioning" evidence=IEA

GO:0031060 "regulation of histone methylation" evidence=IEA

GO:0035065 "regulation of histone acetylation" evidence=IEA

GO:0040030 "regulation of molecular function, epigenetic" evidence=IEA

GO:0043035 "chromatin insulator sequence binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|I3LDG5 CTCF "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 104/209 (49%), Positives = 137/209 (65%)

Query:   108 EEEDLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSP 167
             ++ D++VYDFEE  +   + E     +  ++ + PK +K+ KK V      C  C+YT P
Sbjct:   219 KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNM-KPPKPTKIKKKGV-KKTFQCELCSYTCP 276

Query:   168 KRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGE 227
             +R  L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGE
Sbjct:   277 RRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGE 336

Query:   228 LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL 287
             LVRH RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+Q             C L
Sbjct:   337 LVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQ-------------CSL 383

Query:   288 CPYASSSQRHLESHMLIHTDQKPYLCDHC 316
             C YAS     L+ HM  H+ +KPY C  C
Sbjct:   384 CSYASRDTYKLKRHMRTHSGEKPYECYIC 412

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-040624-5 ctcf "CCCTC-binding factor (zinc finger protein)" [Danio rerio (taxid:7955)]

 Score = 555 (200.4 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 104/209 (49%), Positives = 137/209 (65%)

Query:   108 EEEDLTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSP 167
             ++ D++VYDFEE  +   + E     +  ++ + PK +K+ KK V      C  C+YT P
Sbjct:   259 KDMDVSVYDFEEEQQEGLLSEVNAEKVVGNM-KPPKPTKIKKKGV-KKTFQCELCSYTCP 316

Query:   168 KRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGE 227
             +R  L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGE
Sbjct:   317 RRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGE 376

Query:   228 LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL 287
             LVRH RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+Q             C L
Sbjct:   377 LVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQ-------------CSL 423

Query:   288 CPYASSSQRHLESHMLIHTDQKPYLCDHC 316
             C YAS     L+ HM  H+ +KPY C  C
Sbjct:   424 CSYASRDTYKLKRHMRTHSGEKPYECYIC 452

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	330
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	2e-04
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.002
PLN03142	1033	PLN03142, PLN03142, Probable chromatin-remodeling	0.004

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 199 SLQNHINTHTGVKPHKCKYCESRFTT 224
           +L+ H+ THTG KP+KC  C   F++
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 35.1 bits (81), Expect = 0.002
 Identities = 11/25 (44%), Positives = 19/25 (76%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKT 196
           L RH+++H+ E+P+KC VC + F +
Sbjct: 2   LRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|215601 PLN03142, PLN03142, Probable chromatin-remodeling complex ATPase chain; Provisional

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)

Query: 82  EEEDLTVYDFEEVD--EVDPIGEEAPSSEEEDLTVYDFEEVDEVDPIGEEAPSTIEEDVD 139
           EEE +     EE D  E++ +   A S  ++D    + E+ DE D    E+P+  E    
Sbjct: 1   EEEQVNTQANEEEDEEELEAVARSAGSDSDDDEVPAEDEDEDEEDDEEAESPAKAEISKR 60

Query: 140 EKPKLSKLNKKQ 151
           EK +L +L K++
Sbjct: 61  EKARLKELKKQK 72

Length = 1033

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	330
KOG2462|consensus	279		99.98
KOG2462|consensus	279		99.97
KOG1074|consensus	958		99.95
KOG3623|consensus	1007		99.9
KOG3608|consensus	467		99.88
KOG3608|consensus	467		99.85
KOG1074|consensus	958		99.83
KOG3576|consensus	267		99.76
KOG3623|consensus	1007		99.76
KOG3576|consensus	267		99.76
PLN03086	567	PRLI-interacting factor K; Provisional	99.49
PLN03086	567	PRLI-interacting factor K; Provisional	99.3
PHA02768	55	hypothetical protein; Provisional	99.25
PHA00733	128	hypothetical protein	99.25
PHA00733	128	hypothetical protein	99.17
KOG3993|consensus	500		99.12
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.95
PHA02768	55	hypothetical protein; Provisional	98.91
PHA00616	44	hypothetical protein	98.82
KOG3993|consensus	500		98.63
PHA00732	79	hypothetical protein	98.6
PHA00732	79	hypothetical protein	98.51
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.49
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.39
PHA00616	44	hypothetical protein	98.38
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.36
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.2
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.05
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.99
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.97
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.91
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.84
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.76
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.73
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.73
KOG2231|consensus	669		97.67
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.63
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.63
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.54
smart00355	26	ZnF_C2H2 zinc finger.	97.43
COG5048	467	FOG: Zn-finger [General function prediction only]	97.39
PRK04860	160	hypothetical protein; Provisional	97.37
KOG1146|consensus	1406		97.28
KOG2231|consensus	669		97.22
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.09
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.07
smart00355	26	ZnF_C2H2 zinc finger.	97.01
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.84
KOG1146|consensus	1406		96.82
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.61
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.44
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.41
PRK04860	160	hypothetical protein; Provisional	96.08
COG5048	467	FOG: Zn-finger [General function prediction only]	95.82
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.71
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.64
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.58
KOG2482|consensus	423		95.53
KOG2785|consensus	390		95.44
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	95.02
KOG2482|consensus	423		95.0
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.92
KOG2893|consensus	341		94.79
KOG2893|consensus	341		94.68
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.67
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.6
KOG2785|consensus	390		94.46
KOG4173|consensus	253		94.25
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	94.18
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.71
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	93.67
KOG4173|consensus	253		93.43
COG4049	65	Uncharacterized protein containing archaeal-type C	93.01
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.95
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	92.25
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	91.88
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	91.23
COG4049	65	Uncharacterized protein containing archaeal-type C	89.64
KOG2186|consensus	276		88.99
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	88.77
COG5151	421	SSL1 RNA polymerase II transcription initiation/nu	88.46
smart00531	147	TFIIE Transcription initiation factor IIE.	87.88
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	87.78
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	87.71
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	87.34
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	87.26
PF15269	54	zf-C2H2_7: Zinc-finger	86.89
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	86.89
PRK06266	178	transcription initiation factor E subunit alpha; V	86.45
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	86.37
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	86.03
COG1996	49	RPC10 DNA-directed RNA polymerase, subunit RPC10 (	85.83
COG1592	166	Rubrerythrin [Energy production and conversion]	85.8
KOG2807|consensus	378		85.24
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	84.97
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	84.7
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	84.32
COG4530	129	Uncharacterized protein conserved in bacteria [Fun	84.23
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	84.1
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	84.02
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	84.0
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	83.97
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	83.79
smart00531	147	TFIIE Transcription initiation factor IIE.	83.33
COG1198	730	PriA Primosomal protein N' (replication factor Y)	83.2
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	82.91
COG1198	730	PriA Primosomal protein N' (replication factor Y)	82.44
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	82.08
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	81.73
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	81.59
KOG2186|consensus	276		81.5
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	81.42
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	81.03
PF08274	30	PhnA_Zn_Ribbon: PhnA Zinc-Ribbon ; InterPro: IPR01	80.81

>KOG2462|consensus

Probab=99.98  E-value=4e-33  Score=227.82  Aligned_cols=131  Identities=32%  Similarity=0.618  Sum_probs=97.1

Q ss_pred             CCeeeccCcccccchhhhhhccccccC---cCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHH
Q psy9959         183 RPHKCSVCERGFKTIASLQNHINTHTG---VKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRN  259 (330)
Q Consensus       183 ~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~  259 (330)
                      ..|+|..||+.+.+.++|.+|.++|..   .+.+.|.+|++.|.+...|..|+++ |+  -+++|.+|||.|...+.|+-
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirT-H~--l~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRT-HT--LPCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             CceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhc-cC--CCcccccccccccchHHhhc
Confidence            346666666666666666666666643   3557777888888888778888775 64  56778888888888888877


Q ss_pred             HHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhHhhhhHhhc
Q psy9959         260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAI  329 (330)
Q Consensus       260 H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H  329 (330)
                      |+|+|+|||||             .|+.|+|+|..+++|+.||++|.+.|+|+|..|+|+|..++.|.+|
T Consensus       206 HiRTHTGEKPF-------------~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH  262 (279)
T KOG2462|consen  206 HIRTHTGEKPF-------------SCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKH  262 (279)
T ss_pred             ccccccCCCCc-------------cCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHh
Confidence            77777777664             5888888888888888888888877788888888888888887777

>KOG2462|consensus

Probab=99.97  E-value=1.7e-31  Score=218.36  Aligned_cols=137  Identities=28%  Similarity=0.551  Sum_probs=127.4

Q ss_pred             cCCCcccccccCcccCChhHHHHHHhhhCC---CCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHH
Q psy9959         152 VVAPAHMCNYCNYTSPKRYLLARHLKSHSE---ERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGEL  228 (330)
Q Consensus       152 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  228 (330)
                      ...+.|.|+.|++.+.+..+|.+|.+.|..   .+.+.|..|++.|.+...|.+|+++|+  .++.|.+|||.|.+.+.|
T Consensus       126 ~~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLL  203 (279)
T KOG2462|consen  126 AKHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLL  203 (279)
T ss_pred             ccCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHh
Confidence            345569999999999999999999999854   567999999999999999999999996  689999999999999999


Q ss_pred             HHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHH
Q psy9959         229 VRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLI  304 (330)
Q Consensus       229 ~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~  304 (330)
                      ..|+|+ |+|||||.|+.|+|+|+++++|+.||++|.+.++             |+|..|+|+|..++.|.+|...
T Consensus       204 QGHiRT-HTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~-------------~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  204 QGHIRT-HTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKK-------------HQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             hccccc-ccCCCCccCCcccchhcchHHHHHHHHhhcCCcc-------------ccCcchhhHHHHHHHHHHhhhh
Confidence            999996 9999999999999999999999999999988876             5799999999999999999864

>KOG1074|consensus

Probab=99.95  E-value=3.6e-28  Score=223.89  Aligned_cols=57  Identities=32%  Similarity=0.614  Sum_probs=52.6

Q ss_pred             eecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCc
Q psy9959         213 HKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       213 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      -+|-+|.+...-.+.|+.|.|+ |+|++||+|.+||++|.++.+|+.||.+|...-++
T Consensus       606 NqCiiC~rVlSC~saLqmHyrt-HtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~  662 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRT-HTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPA  662 (958)
T ss_pred             cceeeeeecccchhhhhhhhhc-ccCcCccccccccchhccccchhhcccccccCccc
Confidence            6799999999999999999996 99999999999999999999999999998765443

>KOG3623|consensus

Probab=99.90  E-value=4.3e-25  Score=200.55  Aligned_cols=108  Identities=28%  Similarity=0.546  Sum_probs=92.7

Q ss_pred             CcccccccCcccCChhHHHHHHhh-h-CCCCCeeeccCcccccchhhhhhccccccC-------------cCceecCccc
Q psy9959         155 PAHMCNYCNYTSPKRYLLARHLKS-H-SEERPHKCSVCERGFKTIASLQNHINTHTG-------------VKPHKCKYCE  219 (330)
Q Consensus       155 ~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------~~~~~C~~C~  219 (330)
                      ....|++|.+.+.+...|+.|++. | ..+..|.|..|..+|.++..|.+||.+|..             .+.|+|..||
T Consensus       209 qlltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECg  288 (1007)
T KOG3623|consen  209 QLLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECG  288 (1007)
T ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccc
Confidence            346799999999999999999876 3 234459999999999999999999988743             2459999999


Q ss_pred             cccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHH
Q psy9959         220 SRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRS  263 (330)
Q Consensus       220 ~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~  263 (330)
                      |.|..+-.|+.|+|+ |+|+|||.|+.|+|.|....++..||..
T Consensus       289 KAFKfKHHLKEHlRI-HSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  289 KAFKFKHHLKEHLRI-HSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhhhhHHHHHhhhee-ecCCCCcCCcccccccccCCcccccccc
Confidence            999999999999996 9999999999999999999999999854

>KOG3608|consensus

Probab=99.88  E-value=1.7e-23  Score=175.71  Aligned_cols=158  Identities=26%  Similarity=0.560  Sum_probs=115.1

Q ss_pred             cccccccCcccCChhHHHHHHhhhC--CCCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHh
Q psy9959         156 AHMCNYCNYTSPKRYLLARHLKSHS--EERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVR  233 (330)
Q Consensus       156 ~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  233 (330)
                      ...|+.||..|.++..|-.|++..+  ...+|.|..|.+.|.+...|..|++.|-  .-|+|+.|+.+....+.|.+|++
T Consensus       207 vvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r  284 (467)
T KOG3608|consen  207 VVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIR  284 (467)
T ss_pred             EEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHH
Confidence            3445555555555555555544322  2335666666666666666666666653  45778888888888888888888


Q ss_pred             hhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCC--CccccCChHHHHHHHHHcC-CC--
Q psy9959         234 YKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL--CPYASSSQRHLESHMLIHT-DQ--  308 (330)
Q Consensus       234 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~-~~--  308 (330)
                      ..|+..+||+|..|++.|.+.+.|.+|...|.  ++            .|+|..  |..+|.+...|++|++.|+ |.  
T Consensus       285 ~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS--~~------------~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np  350 (467)
T KOG3608|consen  285 YRHSKDKPFKCDECDTRCVRESDLAKHVQVHS--KT------------VYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNP  350 (467)
T ss_pred             hhhccCCCccccchhhhhccHHHHHHHHHhcc--cc------------ceecCCCCCcHHHHHHHHHHHHHHHhccCCCC
Confidence            88888888888888888888888888888775  22            278988  9999999999999997755 54  


Q ss_pred             CCcccccCChhhHhhhhHhhc
Q psy9959         309 KPYLCDHCDQIRILICVIIAI  329 (330)
Q Consensus       309 ~p~~C~~C~~~f~~~~~l~~H  329 (330)
                      -+|.|-.|++.|.+-.+|.+|
T Consensus       351 ~~Y~CH~Cdr~ft~G~~L~~H  371 (467)
T KOG3608|consen  351 ILYACHCCDRFFTSGKSLSAH  371 (467)
T ss_pred             CceeeecchhhhccchhHHHH
Confidence            459999999999999998877

>KOG3608|consensus

Probab=99.85  E-value=6.1e-22  Score=166.49  Aligned_cols=158  Identities=28%  Similarity=0.570  Sum_probs=141.5

Q ss_pred             ccccc--ccCcccCChhHHHHHHhhhCCCCCeeeccCcccccchhhhhhcccccc--CcCceecCccccccCChHHHHHH
Q psy9959         156 AHMCN--YCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHT--GVKPHKCKYCESRFTTSGELVRH  231 (330)
Q Consensus       156 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H  231 (330)
                      .+.|.  .|.+.|.+++.|+.|++.|++++...|+.||..|.++..|..|++.-+  ...+|.|..|.|.|.+...|..|
T Consensus       177 v~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~H  256 (467)
T KOG3608|consen  177 VTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSH  256 (467)
T ss_pred             eeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHH
Confidence            35564  489999999999999999999999999999999999999999987533  45689999999999999999999


Q ss_pred             HhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCc
Q psy9959         232 VRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPY  311 (330)
Q Consensus       232 ~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~  311 (330)
                      +.. |-  .-|+|+.|+.+....++|..|++..+            ...|||+|..|.+.|.+.+.|.+|..+|. +..|
T Consensus       257 v~r-Hv--n~ykCplCdmtc~~~ssL~~H~r~rH------------s~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y  320 (467)
T KOG3608|consen  257 VVR-HV--NCYKCPLCDMTCSSASSLTTHIRYRH------------SKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVY  320 (467)
T ss_pred             HHH-hh--hcccccccccCCCChHHHHHHHHhhh------------ccCCCccccchhhhhccHHHHHHHHHhcc-ccce
Confidence            986 64  45999999999999999999999743            33566899999999999999999999998 7779


Q ss_pred             cccc--CChhhHhhhhHhhc
Q psy9959         312 LCDH--CDQIRILICVIIAI  329 (330)
Q Consensus       312 ~C~~--C~~~f~~~~~l~~H  329 (330)
                      +|..  |..+|.++..|.+|
T Consensus       321 ~C~h~~C~~s~r~~~q~~~H  340 (467)
T KOG3608|consen  321 QCEHPDCHYSVRTYTQMRRH  340 (467)
T ss_pred             ecCCCCCcHHHHHHHHHHHH
Confidence            9988  99999999999988

>KOG1074|consensus

Probab=99.83  E-value=5.1e-22  Score=183.64  Aligned_cols=76  Identities=32%  Similarity=0.652  Sum_probs=67.5

Q ss_pred             CccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCC----cccc--
Q psy9959         241 PHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKP----YLCD--  314 (330)
Q Consensus       241 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p----~~C~--  314 (330)
                      |-+|-+|.++..-+++|+.|.|+|+|+||             |+|++||++|+++.+|+.||-+|....|    |.|+  
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERP-------------FkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~  671 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERP-------------FKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPST  671 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCc-------------cccccccchhccccchhhcccccccCccccccccCCch
Confidence            45799999999999999999999988887             5799999999999999999999976544    7899  


Q ss_pred             -cCChhhHhhhhHhhc
Q psy9959         315 -HCDQIRILICVIIAI  329 (330)
Q Consensus       315 -~C~~~f~~~~~l~~H  329 (330)
                       +|-+.|.....|..|
T Consensus       672 ~ic~~kftn~V~lpQh  687 (958)
T KOG1074|consen  672 FICQKKFTNAVTLPQH  687 (958)
T ss_pred             hhhcccccccccccce
Confidence             999999988887766

>KOG3576|consensus

Probab=99.76  E-value=1.7e-19  Score=140.70  Aligned_cols=117  Identities=33%  Similarity=0.611  Sum_probs=108.4

Q ss_pred             CCcccccccCcccCChhHHHHHHhhhCCCCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHh
Q psy9959         154 APAHMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVR  233 (330)
Q Consensus       154 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  233 (330)
                      ...|.|.+|++.|.-...|.+|++-|...+.|.|..||+.|.....|++|+++|+|.+||+|..|++.|+..-.|..|++
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            44589999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hhcC----------CCCCccccccCccccCHHHHHHHHHHhcCCCCc
Q psy9959         234 YKHT----------HEKPHKCSICDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       234 ~~H~----------~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      ..|.          ..+.|.|..||.+-.....+..|+..|+...|+
T Consensus       195 kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Spa  241 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPA  241 (267)
T ss_pred             HHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCHH
Confidence            7774          346799999999999999999999999876554

>KOG3623|consensus

Probab=99.76  E-value=1.8e-19  Score=164.42  Aligned_cols=117  Identities=23%  Similarity=0.503  Sum_probs=105.5

Q ss_pred             eecCccccccCChHHHHHHHhhhcC-CCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccc
Q psy9959         213 HKCKYCESRFTTSGELVRHVRYKHT-HEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYA  291 (330)
Q Consensus       213 ~~C~~C~~~f~~~~~l~~H~~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~  291 (330)
                      ..|++|.+.|.....|+.|++..|. .+..|.|..|.++|+++..|.+||.+|....+-..+...-.+.+.|+|..|||+
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKA  290 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKA  290 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchh
Confidence            6899999999999999999998775 456799999999999999999999999877766566666677889999999999


Q ss_pred             cCChHHHHHHHHHcCCCCCcccccCChhhHhhhhHhhc
Q psy9959         292 SSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAI  329 (330)
Q Consensus       292 F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H  329 (330)
                      |+.+-+|+.|+|+|.|+|||.|+.|+|+|.+.-++--|
T Consensus       291 FKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSH  328 (1007)
T KOG3623|consen  291 FKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSH  328 (1007)
T ss_pred             hhhHHHHHhhheeecCCCCcCCcccccccccCCccccc
Confidence            99999999999999999999999999999988776655

>KOG3576|consensus

Probab=99.76  E-value=2.3e-19  Score=139.99  Aligned_cols=126  Identities=29%  Similarity=0.614  Sum_probs=110.6

Q ss_pred             CCCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHH
Q psy9959         181 EERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNH  260 (330)
Q Consensus       181 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H  260 (330)
                      +...|.|.+|++.|....-|.+|++-|...+.|-|..||+.|.....|++|+++ |+|.+||+|..|+|+|+.+-+|..|
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rt-htgvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRT-HTGVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhcc-ccCccccchhhhhHHHHhhccHHHH
Confidence            456799999999999999999999999999999999999999999999999996 9999999999999999999999999


Q ss_pred             HHHhcCCCC-ceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCC
Q psy9959         261 MRSHTGERP-YQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKP  310 (330)
Q Consensus       261 ~~~h~~~~~-~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p  310 (330)
                      ++.-+|... |...   ....|.|.|..||.+-.....+..|++.|+-..|
T Consensus       193 l~kvhgv~~~yayk---err~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  193 LKKVHGVQHQYAYK---ERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHHHcCchHHHHHH---HhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            998777532 2111   1234668999999999999999999999886544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.49  E-value=7.3e-14  Score=128.78  Aligned_cols=135  Identities=24%  Similarity=0.483  Sum_probs=105.9

Q ss_pred             ccccccCcccCChhHHHHHHhhhCCCCCeeecc--CcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhh
Q psy9959         157 HMCNYCNYTSPKRYLLARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRY  234 (330)
Q Consensus       157 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  234 (330)
                      ..|+.|.+.... ..|..|.... ....-.|+.  |+..|. +..+..|         +.|+.|++.|. ...|..|++.
T Consensus       408 V~C~NC~~~i~l-~~l~lHe~~C-~r~~V~Cp~~~Cg~v~~-r~el~~H---------~~C~~Cgk~f~-~s~LekH~~~  474 (567)
T PLN03086        408 VECRNCKHYIPS-RSIALHEAYC-SRHNVVCPHDGCGIVLR-VEEAKNH---------VHCEKCGQAFQ-QGEMEKHMKV  474 (567)
T ss_pred             EECCCCCCccch-hHHHHHHhhC-CCcceeCCcccccceee-ccccccC---------ccCCCCCCccc-hHHHHHHHHh
Confidence            579999987754 4566787543 233457884  999883 3444444         48999999996 6789999998


Q ss_pred             hcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccC----------ChHHHHHHHHH
Q psy9959         235 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASS----------SQRHLESHMLI  304 (330)
Q Consensus       235 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~----------~~~~L~~H~~~  304 (330)
                      +|   +++.|+ ||+.+ .+..|..|+++|.+.++             +.|..|++.|.          ..+.|..|..+
T Consensus       475 ~H---kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kp-------------i~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~  536 (567)
T PLN03086        475 FH---EPLQCP-CGVVL-EKEQMVQHQASTCPLRL-------------ITCRFCGDMVQAGGSAMDVRDRLRGMSEHESI  536 (567)
T ss_pred             cC---CCccCC-CCCCc-chhHHHhhhhccCCCCc-------------eeCCCCCCccccCccccchhhhhhhHHHHHHh
Confidence            54   789999 99755 67999999999888777             57999999995          24689999998


Q ss_pred             cCCCCCcccccCChhhHhh
Q psy9959         305 HTDQKPYLCDHCDQIRILI  323 (330)
Q Consensus       305 H~~~~p~~C~~C~~~f~~~  323 (330)
                      + |.+++.|..||+.+..+
T Consensus       537 C-G~rt~~C~~Cgk~Vrlr  554 (567)
T PLN03086        537 C-GSRTAPCDSCGRSVMLK  554 (567)
T ss_pred             c-CCcceEccccCCeeeeh
Confidence            6 99999999999988654

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.30  E-value=2.9e-12  Score=118.39  Aligned_cols=117  Identities=18%  Similarity=0.417  Sum_probs=92.8

Q ss_pred             cccc--cCcccCChhHHHHHHhhhCCCCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhh
Q psy9959         158 MCNY--CNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYK  235 (330)
Q Consensus       158 ~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  235 (330)
                      .|+.  |+..|.. ..+..         .+.|+.|++.|. ...|..|++.|+  +++.|+ |++.+ ....|..|+.. 
T Consensus       435 ~Cp~~~Cg~v~~r-~el~~---------H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~t-  498 (567)
T PLN03086        435 VCPHDGCGIVLRV-EEAKN---------HVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQAS-  498 (567)
T ss_pred             eCCcccccceeec-ccccc---------CccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhc-
Confidence            5774  8888832 33333         368999999995 688999999985  789999 99755 66899999985 


Q ss_pred             cCCCCCccccccCcccc----------CHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHc
Q psy9959         236 HTHEKPHKCSICDYASV----------ELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIH  305 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~----------~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H  305 (330)
                      |...+++.|.+|++.|.          ..+.|..|.... |.++             +.|..||+.|..+ .|..|+..-
T Consensus       499 hCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt-------------~~C~~Cgk~Vrlr-dm~~H~~~~  563 (567)
T PLN03086        499 TCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRT-------------APCDSCGRSVMLK-EMDIHQIAV  563 (567)
T ss_pred             cCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcc-------------eEccccCCeeeeh-hHHHHHHHh
Confidence            99999999999999995          245788888874 5555             5799999998865 788998653

>PHA02768 hypothetical protein; Provisional

Probab=99.25  E-value=2.2e-12  Score=80.16  Aligned_cols=45  Identities=16%  Similarity=0.375  Sum_probs=41.4

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhHhhhhHhh
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIA  328 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~  328 (330)
                      .|.|+.||+.|.+.++|..|+++|+  ++|+|..|++.|...+.|+.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~~   49 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYIE   49 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeEE
Confidence            3889999999999999999999998  79999999999998887753

>PHA00733 hypothetical protein

Probab=99.25  E-value=8.6e-12  Score=94.39  Aligned_cols=83  Identities=12%  Similarity=0.169  Sum_probs=48.5

Q ss_pred             cCceecCccccccCChHHHHHH--Hh--hhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCcccc
Q psy9959         210 VKPHKCKYCESRFTTSGELVRH--VR--YKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKC  285 (330)
Q Consensus       210 ~~~~~C~~C~~~f~~~~~l~~H--~~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C  285 (330)
                      .+++.|.+|.+.|.+...|..|  ++  ..+.+.+||.|+.|++.|.+...|..|++.|.  .+             |.|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~--~~-------------~~C  102 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTE--HS-------------KVC  102 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCC--cC-------------ccC
Confidence            3445555555555544444433  10  11234667777777777777777777776541  11             467


Q ss_pred             CCCccccCChHHHHHHHHHcCC
Q psy9959         286 ELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       286 ~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      ..|+++|.....|..|+...++
T Consensus       103 ~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        103 PVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCCccCCHHHHHHHHHHhcC
Confidence            7777777777777777765443

>PHA00733 hypothetical protein

Probab=99.17  E-value=3.3e-11  Score=91.20  Aligned_cols=84  Identities=21%  Similarity=0.358  Sum_probs=67.8

Q ss_pred             CCCCeeeccCcccccchhhhhhc--c---ccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHH
Q psy9959         181 EERPHKCSVCERGFKTIASLQNH--I---NTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELS  255 (330)
Q Consensus       181 ~~~~~~C~~C~~~f~~~~~l~~H--~---~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~  255 (330)
                      ..+++.|.+|.+.|.....|..|  +   ..+++.+||.|..|++.|.+...|..|++. |  ..+|.|..|++.|....
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~-h--~~~~~C~~CgK~F~~~~  113 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRY-T--EHSKVCPVCGKEFRNTD  113 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhc-C--CcCccCCCCCCccCCHH
Confidence            45678888888887776665554  1   123457899999999999999999999985 5  35799999999999999


Q ss_pred             HHHHHHHHhcCC
Q psy9959         256 KMRNHMRSHTGE  267 (330)
Q Consensus       256 ~L~~H~~~h~~~  267 (330)
                      .|..|+...++.
T Consensus       114 sL~~H~~~~h~~  125 (128)
T PHA00733        114 STLDHVCKKHNI  125 (128)
T ss_pred             HHHHHHHHhcCc
Confidence            999999887763

>KOG3993|consensus

Probab=99.12  E-value=3.9e-12  Score=110.32  Aligned_cols=113  Identities=19%  Similarity=0.273  Sum_probs=71.8

Q ss_pred             CCCcccccccCcccCChhHHHHHHhhhCCCCCeeeccCcccccchhhhhhccccccCcCceec--Ccccc-ccCChHHHH
Q psy9959         153 VAPAHMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC--KYCES-RFTTSGELV  229 (330)
Q Consensus       153 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~-~f~~~~~l~  229 (330)
                      ....|.|..|...|.+...|.+|.-.-.-..-|+|+.|+|.|....+|..|.|+|....--.=  ..=.+ ...+. .+.
T Consensus       264 ~iGdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~r-ae~  342 (500)
T KOG3993|consen  264 VIGDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETR-AEV  342 (500)
T ss_pred             cHHHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhh-hhh
Confidence            344599999999999999999997543334569999999999999999999999964221000  00000 00000 111


Q ss_pred             HHH-hh-hcCCCCCccccccCccccCHHHHHHHHHHhcC
Q psy9959         230 RHV-RY-KHTHEKPHKCSICDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       230 ~H~-~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~  266 (330)
                      +-. +. .-...-.|.|.+|+|.|.....|+.|+.+|+.
T Consensus       343 ~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  343 QEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             hhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence            000 00 00122357888888888888888888777753

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.95  E-value=2.6e-10  Score=60.72  Aligned_cols=26  Identities=38%  Similarity=0.662  Sum_probs=23.9

Q ss_pred             HHHHHHHHcCCCCCcccccCChhhHh
Q psy9959         297 HLESHMLIHTDQKPYLCDHCDQIRIL  322 (330)
Q Consensus       297 ~L~~H~~~H~~~~p~~C~~C~~~f~~  322 (330)
                      +|.+|+++|+|++||.|+.|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            58999999999999999999999963

...

>PHA02768 hypothetical protein; Provisional

Probab=98.91  E-value=5.9e-10  Score=69.39  Aligned_cols=42  Identities=24%  Similarity=0.403  Sum_probs=26.6

Q ss_pred             ccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHH
Q psy9959         242 HKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHL  298 (330)
Q Consensus       242 ~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L  298 (330)
                      |.|+.||+.|...++|..|+++|+  ++             |+|..|++.|.+.+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~-------------~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TN-------------LKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--Cc-------------ccCCcccceeccccee
Confidence            566666666666666666666665  22             4566666666665544

>PHA00616 hypothetical protein

Probab=98.82  E-value=1.6e-09  Score=64.07  Aligned_cols=36  Identities=14%  Similarity=0.219  Sum_probs=33.0

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCCCCCcccccCC
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCD  317 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~  317 (330)
                      +|+|..||+.|.+++.|.+|++.|||+++|.|+.=-
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~y   36 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYFY   36 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEEE
Confidence            588999999999999999999999999999997633

>KOG3993|consensus

Probab=98.63  E-value=4e-09  Score=91.89  Aligned_cols=28  Identities=25%  Similarity=0.247  Sum_probs=24.8

Q ss_pred             CCCcccccccCcccCChhHHHHHHhhhC
Q psy9959         153 VAPAHMCNYCNYTSPKRYLLARHLKSHS  180 (330)
Q Consensus       153 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~  180 (330)
                      +.-.|+|+.|++.|+-..+|..|.|+|.
T Consensus       292 V~vEYrCPEC~KVFsCPANLASHRRWHK  319 (500)
T KOG3993|consen  292 VHVEYRCPECDKVFSCPANLASHRRWHK  319 (500)
T ss_pred             EEeeecCCcccccccCchhhhhhhcccC
Confidence            3445899999999999999999999984

>PHA00732 hypothetical protein

Probab=98.60  E-value=2.6e-08  Score=68.30  Aligned_cols=42  Identities=21%  Similarity=0.425  Sum_probs=35.9

Q ss_pred             ccccCCCccccCChHHHHHHHHH-cCCCCCcccccCChhhHhhhhHhhc
Q psy9959         282 CWKCELCPYASSSQRHLESHMLI-HTDQKPYLCDHCDQIRILICVIIAI  329 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~-H~~~~p~~C~~C~~~f~~~~~l~~H  329 (330)
                      +|.|..||+.|.+...|..|++. |+   ++.|+.||+.|..   |.+|
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~~---l~~H   43 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYRR---LNQH   43 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeCC---hhhh
Confidence            47899999999999999999985 64   4789999999984   5555

>PHA00732 hypothetical protein

Probab=98.51  E-value=7.9e-08  Score=65.92  Aligned_cols=21  Identities=38%  Similarity=0.922  Sum_probs=11.9

Q ss_pred             ccccccCccccCHHHHHHHHH
Q psy9959         242 HKCSICDYASVELSKMRNHMR  262 (330)
Q Consensus       242 ~~C~~C~k~f~~~~~L~~H~~  262 (330)
                      |.|..|++.|.+...|..|++
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r   22 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHAR   22 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhh
Confidence            455555555555555555555

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.49  E-value=1.1e-07  Score=50.51  Aligned_cols=24  Identities=42%  Similarity=1.032  Sum_probs=14.4

Q ss_pred             HHHHHhhhCCCCCeeeccCccccc
Q psy9959         172 LARHLKSHSEERPHKCSVCERGFK  195 (330)
Q Consensus       172 l~~H~~~h~~~~~~~C~~C~~~f~  195 (330)
                      |.+|++.|+++++|.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            555666666666666666666554

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.39  E-value=5.6e-07  Score=57.32  Aligned_cols=52  Identities=27%  Similarity=0.531  Sum_probs=41.7

Q ss_pred             ceecCccccccCChHHHHHHHhhhcCCC-CCccccccCccccCHHHHHHHHHHhcC
Q psy9959         212 PHKCKYCESRFTTSGELVRHVRYKHTHE-KPHKCSICDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       212 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~-~~~~C~~C~k~f~~~~~L~~H~~~h~~  266 (330)
                      .|.|++|++ ..+...|..|....|..+ +.+.|++|...+.  .+|..|+..+++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            488999999 566778999988888765 5689999998655  489999988763

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00616 hypothetical protein

Probab=98.38  E-value=2e-07  Score=55.24  Aligned_cols=30  Identities=13%  Similarity=0.149  Sum_probs=25.0

Q ss_pred             CccccccCccccCHHHHHHHHHHhcCCCCc
Q psy9959         241 PHKCSICDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       241 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      ||+|+.||+.|...+.|..|++.|+|++++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~   30 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKL   30 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcc
Confidence            578888888888888888888888888775

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.36  E-value=7.5e-07  Score=56.75  Aligned_cols=53  Identities=17%  Similarity=0.357  Sum_probs=39.3

Q ss_pred             CccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCC
Q psy9959         241 PHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       241 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      .|.|++|++ ..+...|..|....+...+           +.+.|++|...+.  .+|..|+..+++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~-----------~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSES-----------KNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCC-----------CCccCCCchhhhh--hHHHHHHHHhcC
Confidence            488999999 5667889999877554322           2368999998655  489999987653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.20  E-value=8.5e-07  Score=45.75  Aligned_cols=23  Identities=39%  Similarity=0.736  Sum_probs=21.4

Q ss_pred             cccCCCccccCChHHHHHHHHHc
Q psy9959         283 WKCELCPYASSSQRHLESHMLIH  305 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H  305 (330)
                      |.|+.|++.|.++..|.+|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            67999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.05  E-value=1.5e-06  Score=73.29  Aligned_cols=52  Identities=33%  Similarity=0.557  Sum_probs=45.3

Q ss_pred             CCCccccCC--CccccCChHHHHHHHHH-cC------------------CCCCcccccCChhhHhhhhHhhcC
Q psy9959         279 GEKCWKCEL--CPYASSSQRHLESHMLI-HT------------------DQKPYLCDHCDQIRILICVIIAIR  330 (330)
Q Consensus       279 ~~k~~~C~~--C~~~F~~~~~L~~H~~~-H~------------------~~~p~~C~~C~~~f~~~~~l~~H~  330 (330)
                      ++|||+|++  |.|+|++...|+-|+.- |.                  ..|||+|++|+|++.....|.-||
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            359999998  99999999999999973 31                  248999999999999999998886

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.99  E-value=5.1e-06  Score=42.77  Aligned_cols=23  Identities=39%  Similarity=0.745  Sum_probs=16.3

Q ss_pred             ccccccCccccCHHHHHHHHHHh
Q psy9959         242 HKCSICDYASVELSKMRNHMRSH  264 (330)
Q Consensus       242 ~~C~~C~k~f~~~~~L~~H~~~h  264 (330)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777777654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.97  E-value=5.2e-06  Score=43.13  Aligned_cols=24  Identities=29%  Similarity=0.646  Sum_probs=20.3

Q ss_pred             cccCCCccccCChHHHHHHHHHcC
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~  306 (330)
                      |.|++|++.|.+...|..|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            679999999999999999999875

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.91  E-value=8.2e-06  Score=59.34  Aligned_cols=22  Identities=27%  Similarity=0.590  Sum_probs=11.9

Q ss_pred             cccCCCccccCChHHHHHHHHH
Q psy9959         283 WKCELCPYASSSQRHLESHMLI  304 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~  304 (330)
                      |.|..|++.|.+...|..||+.
T Consensus        51 ~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   51 FRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             EEBSSSS-EESSHHHHHHHHHH
T ss_pred             CCCCccCCCCcCHHHHHHHHcC
Confidence            4455555555555555555554

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.84  E-value=9.7e-06  Score=43.53  Aligned_cols=26  Identities=27%  Similarity=0.408  Sum_probs=23.5

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCC
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      +|.|..|++.|.+...|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            47899999999999999999998864

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.76  E-value=1.8e-05  Score=57.49  Aligned_cols=73  Identities=19%  Similarity=0.491  Sum_probs=18.6

Q ss_pred             eeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHh
Q psy9959         186 KCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSH  264 (330)
Q Consensus       186 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h  264 (330)
                      .|..|+..|.+...|..|+...++..   .. ....+.....+..+.+.  .-...+.|..|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~---~~-~~~~l~~~~~~~~~~~~--~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFD---IP-DQKYLVDPNRLLNYLRK--KVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccc---cc-ccccccccccccccccc--ccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            37777777777777777776544421   11 11222233344444432  1223577888888888888888888765

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.73  E-value=7.9e-06  Score=69.13  Aligned_cols=26  Identities=23%  Similarity=0.455  Sum_probs=22.6

Q ss_pred             CCCCccccCCCccccCChHHHHHHHH
Q psy9959         278 EGEKCWKCELCPYASSSQRHLESHML  303 (330)
Q Consensus       278 ~~~k~~~C~~C~~~F~~~~~L~~H~~  303 (330)
                      ...|||+|.+|+|+|++...|+-|..
T Consensus       394 ~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         394 AKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             ccCCceeccccchhhccCccceeccc
Confidence            35678999999999999999999864

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.73  E-value=3e-05  Score=40.16  Aligned_cols=24  Identities=38%  Similarity=0.764  Sum_probs=15.3

Q ss_pred             ccccccCccccCHHHHHHHHHHhc
Q psy9959         242 HKCSICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       242 ~~C~~C~k~f~~~~~L~~H~~~h~  265 (330)
                      |.|++|++.|.+...|..|++.|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567777777777777777776653

...

>KOG2231|consensus

Probab=97.67  E-value=7.2e-05  Score=70.82  Aligned_cols=47  Identities=32%  Similarity=0.771  Sum_probs=26.6

Q ss_pred             ecCccccccCChHHHHHHHhhhcCCCCCcccccc------CccccCHHHHHHHHHHhc
Q psy9959         214 KCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC------DYASVELSKMRNHMRSHT  265 (330)
Q Consensus       214 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C------~k~f~~~~~L~~H~~~h~  265 (330)
                      .|..|...|.....|.+|++..|     |.|.+|      +..|.....|..|.+.+|
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~h-----~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFDH-----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccce-----eheeecCcccccchhcccchHHHHHhhhcC
Confidence            46666666666666666665533     344444      234555566666666554

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.63  E-value=4.3e-05  Score=46.26  Aligned_cols=41  Identities=22%  Similarity=0.494  Sum_probs=23.8

Q ss_pred             HHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCC
Q psy9959         229 VRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERP  269 (330)
Q Consensus       229 ~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~  269 (330)
                      ..+.+.++..+.|..|+.|+..+.+..+|++|+.++|+.+|
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            44555455567788888888888888888888888777665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.63  E-value=5.4e-05  Score=45.85  Aligned_cols=32  Identities=28%  Similarity=0.491  Sum_probs=23.5

Q ss_pred             CCCccccCCCccccCChHHHHHHHHHcCCCCC
Q psy9959         279 GEKCWKCELCPYASSSQRHLESHMLIHTDQKP  310 (330)
Q Consensus       279 ~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p  310 (330)
                      .+.|..|++|+..+.+..+|++|+.++|+.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            45567899999999999999999999888776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.54  E-value=3.7e-05  Score=41.20  Aligned_cols=25  Identities=40%  Similarity=0.743  Sum_probs=15.2

Q ss_pred             CccccccCccccCHHHHHHHHHHhc
Q psy9959         241 PHKCSICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       241 ~~~C~~C~k~f~~~~~L~~H~~~h~  265 (330)
                      +|.|..|++.|.+..+|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            3566666666666666666665553

>smart00355 ZnF_C2H2 zinc finger

Probab=97.43  E-value=0.00012  Score=38.45  Aligned_cols=24  Identities=29%  Similarity=0.531  Sum_probs=22.0

Q ss_pred             cccCCCccccCChHHHHHHHHHcC
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~  306 (330)
                      |.|..|++.|.+...|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999999875

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=97.39  E-value=5.3e-05  Score=70.42  Aligned_cols=155  Identities=27%  Similarity=0.415  Sum_probs=103.0

Q ss_pred             cccccccCcccCChhHHHHHHh--hhCCC--CCeeec--cCcccccchhhhhhccccccCcCceecCc--cccccCChHH
Q psy9959         156 AHMCNYCNYTSPKRYLLARHLK--SHSEE--RPHKCS--VCERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGE  227 (330)
Q Consensus       156 ~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~  227 (330)
                      .+.|..|...|.....|.+|.+  .|.+.  +++.|+  .|++.|.....+..|...|++..++.|..  |...+.....
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLN  368 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccC
Confidence            4677888888888888888888  67777  788888  68888888888888888887777666654  3333332222


Q ss_pred             HH----HHHhhhcCCCCCccccc--cCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHH
Q psy9959         228 LV----RHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESH  301 (330)
Q Consensus       228 l~----~H~~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H  301 (330)
                      -.    .+..........+.|..  |...+.....+..|...|....++.           +.|..|.+.|.....|..|
T Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~  437 (467)
T COG5048         369 NEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYN-----------CKNPPCSKSFNRHYNLIPH  437 (467)
T ss_pred             CCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcC-----------CCCCcchhhccCccccccc
Confidence            10    00000011223334433  6666666666666666665554433           7789999999999999999


Q ss_pred             HHHcCCCCCcccccCChhhH
Q psy9959         302 MLIHTDQKPYLCDHCDQIRI  321 (330)
Q Consensus       302 ~~~H~~~~p~~C~~C~~~f~  321 (330)
                      ++.|....++.|..++....
T Consensus       438 ~~~~~~~~~~~~~~~~~~~~  457 (467)
T COG5048         438 KKIHTNHAPLLCSILKSFRR  457 (467)
T ss_pred             ccccccCCceeeccccccch
Confidence            99998888777766665544

>PRK04860 hypothetical protein; Provisional

Probab=97.37  E-value=9.1e-05  Score=58.25  Aligned_cols=39  Identities=18%  Similarity=0.497  Sum_probs=34.8

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhHhhh
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILIC  324 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~  324 (330)
                      +|.|. |+.   ....+++|.++|+++++|.|..|++.|....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            69998 997   7788999999999999999999999987543

>KOG1146|consensus

Probab=97.28  E-value=0.0001  Score=73.81  Aligned_cols=141  Identities=23%  Similarity=0.431  Sum_probs=95.8

Q ss_pred             ccCcccccchhhhhhcccc-ccCcCceecCccccccCChHHHHHHHhhhcC------------------------CCCCc
Q psy9959         188 SVCERGFKTIASLQNHINT-HTGVKPHKCKYCESRFTTSGELVRHVRYKHT------------------------HEKPH  242 (330)
Q Consensus       188 ~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~------------------------~~~~~  242 (330)
                      .-|+..|.....+..|+.. |...+.|.|+.|+..|.....|..|+|.+|.                        +.++|
T Consensus       440 ~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~  519 (1406)
T KOG1146|consen  440 TKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPY  519 (1406)
T ss_pred             cchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcc
Confidence            3345555556666666543 5555778888888888888888888876442                        23689


Q ss_pred             cccccCccccCHHHHHHHHHHhcCCCCce-------eeecc-----------------------cCCCCccccCCCcccc
Q psy9959         243 KCSICDYASVELSKMRNHMRSHTGERPYQ-------LHCKS-----------------------HEGEKCWKCELCPYAS  292 (330)
Q Consensus       243 ~C~~C~k~f~~~~~L~~H~~~h~~~~~~~-------~h~~~-----------------------~~~~k~~~C~~C~~~F  292 (330)
                      .|..|...+....+|.+|+..-......+       .+.++                       ....-.|.|.+|+..-
T Consensus       520 ~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yet  599 (1406)
T KOG1146|consen  520 PCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYET  599 (1406)
T ss_pred             cceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchh
Confidence            99999999999999999987532111010       00000                       1112358999999999


Q ss_pred             CChHHHHHHHHH-cCCCCCcccccCChhhHhhhhHhh
Q psy9959         293 SSQRHLESHMLI-HTDQKPYLCDHCDQIRILICVIIA  328 (330)
Q Consensus       293 ~~~~~L~~H~~~-H~~~~p~~C~~C~~~f~~~~~l~~  328 (330)
                      +-..+|+.||.. ++-..|--|-.|+..+.....|.-
T Consensus       600 niarnlrihmtss~~s~~p~~~Lq~~it~~l~~~~~~  636 (1406)
T KOG1146|consen  600 NIARNLRIHMTASPSSSPPSLVLQQNITSSLASLLGG  636 (1406)
T ss_pred             hhhhccccccccCCCCCChHHHhhhcchhhccccccC
Confidence            999999999965 555555788888887777666543

>KOG2231|consensus

Probab=97.22  E-value=0.00059  Score=64.83  Aligned_cols=121  Identities=25%  Similarity=0.567  Sum_probs=84.1

Q ss_pred             ccccccCcccCChhHHHHHHhhhCCCCCeeeccCcccccchhhhhhcccc-ccCcCceecCccc---------cccCChH
Q psy9959         157 HMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINT-HTGVKPHKCKYCE---------SRFTTSG  226 (330)
Q Consensus       157 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~---------~~f~~~~  226 (330)
                      +.|.+|+..|...+            ..-.|..| -.|.+...|+.|+.. |.   .+.|..|-         ....+..
T Consensus       100 ~~C~~C~~~~~~~~------------~~~~~~~c-~~~~s~~~Lk~H~~~~H~---~~~c~lC~~~~kif~~e~k~Yt~~  163 (669)
T KOG2231|consen  100 HSCHICDRRFRALY------------NKKECLHC-TEFKSVENLKNHMRDQHK---LHLCSLCLQNLKIFINERKLYTRA  163 (669)
T ss_pred             hhcCccccchhhhc------------ccCCCccc-cchhHHHHHHHHHHHhhh---hhccccccccceeeeeeeehehHH
Confidence            67999988774321            12368888 778888999999854 42   24444432         2234556


Q ss_pred             HHHHHHhhhcCCCC----CccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCC------ccccCChH
Q psy9959         227 ELVRHVRYKHTHEK----PHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELC------PYASSSQR  296 (330)
Q Consensus       227 ~l~~H~~~~H~~~~----~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C------~~~F~~~~  296 (330)
                      .|..|+..--.+++    .-.|..|...|.....|.+|++.++                 |.|..|      +..|....
T Consensus       164 el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h-----------------~~chfC~~~~~~neyy~~~~  226 (669)
T KOG2231|consen  164 ELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLRFDH-----------------EFCHFCDYKTGQNEYYNDYD  226 (669)
T ss_pred             HHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhccce-----------------eheeecCcccccchhcccch
Confidence            77888764222111    2469999999999999999999876                 456666      46788889


Q ss_pred             HHHHHHHHcCCCCCcccc
Q psy9959         297 HLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       297 ~L~~H~~~H~~~~p~~C~  314 (330)
                      .|..|.+.+|    |.|.
T Consensus       227 dLe~HfR~~H----flCE  240 (669)
T KOG2231|consen  227 DLEEHFRKGH----FLCE  240 (669)
T ss_pred             HHHHHhhhcC----cccc
Confidence            9999998876    6676

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.09  E-value=0.00028  Score=36.90  Aligned_cols=23  Identities=26%  Similarity=0.602  Sum_probs=20.9

Q ss_pred             cccCCCccccCChHHHHHHHHHc
Q psy9959         283 WKCELCPYASSSQRHLESHMLIH  305 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H  305 (330)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            57999999999999999999764

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.07  E-value=0.00034  Score=36.23  Aligned_cols=24  Identities=33%  Similarity=0.801  Sum_probs=19.3

Q ss_pred             cccCCCccccCChHHHHHHHHHcCC
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      |+|+.|+.... ...|.+|++.|++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            68999999998 9999999998753

>smart00355 ZnF_C2H2 zinc finger

Probab=97.01  E-value=0.0007  Score=35.43  Aligned_cols=24  Identities=29%  Similarity=0.556  Sum_probs=18.3

Q ss_pred             ccccccCccccCHHHHHHHHHHhc
Q psy9959         242 HKCSICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       242 ~~C~~C~k~f~~~~~L~~H~~~h~  265 (330)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            567888888888888888887653

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.84  E-value=0.0022  Score=55.35  Aligned_cols=125  Identities=26%  Similarity=0.496  Sum_probs=85.9

Q ss_pred             ccccc--cCcccCChhHHHHHHhhhCCCCCeeeccCcc---cc------cchhhhhhccccccCc---C-ceecCccccc
Q psy9959         157 HMCNY--CNYTSPKRYLLARHLKSHSEERPHKCSVCER---GF------KTIASLQNHINTHTGV---K-PHKCKYCESR  221 (330)
Q Consensus       157 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~---~f------~~~~~l~~H~~~h~~~---~-~~~C~~C~~~  221 (330)
                      |.|+.  |..+......|..|.+..++  .+.|.+|-.   .|      .+...|..|...-..+   + .-.|..|...
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~--~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHG--FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcC--cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            66765  55555567788999887443  367888743   33      3456677776542211   1 1369999999


Q ss_pred             cCChHHHHHHHhhhcCCCCCccccccCc-------cccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCC--Cc---
Q psy9959         222 FTTSGELVRHVRYKHTHEKPHKCSICDY-------ASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL--CP---  289 (330)
Q Consensus       222 f~~~~~l~~H~~~~H~~~~~~~C~~C~k-------~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~--C~---  289 (330)
                      |..-..|.+|++..|.     .|-+|++       -|.+...|..|.+.-|                 |.|.+  |.   
T Consensus       230 FYdDDEL~~HcR~~HE-----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h-----------------y~ct~qtc~~~k  287 (493)
T COG5236         230 FYDDDELRRHCRLRHE-----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH-----------------YCCTFQTCRVGK  287 (493)
T ss_pred             ecChHHHHHHHHhhhh-----hhhhhhccCccchhhhhCHHHHHHHhhcCc-----------------eEEEEEEEecCc
Confidence            9999999999997663     4666665       4788889999986543                 44543  42   


Q ss_pred             -cccCChHHHHHHHHHc
Q psy9959         290 -YASSSQRHLESHMLIH  305 (330)
Q Consensus       290 -~~F~~~~~L~~H~~~H  305 (330)
                       ..|.....|..|+..-
T Consensus       288 ~~vf~~~~el~~h~~~~  304 (493)
T COG5236         288 CYVFPYHTELLEHLTRF  304 (493)
T ss_pred             EEEeccHHHHHHHHHHH
Confidence             4789999999998543

>KOG1146|consensus

Probab=96.82  E-value=0.00054  Score=68.91  Aligned_cols=116  Identities=20%  Similarity=0.332  Sum_probs=88.1

Q ss_pred             cCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCC--Cce----eeec------ccCCCCc
Q psy9959         215 CKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER--PYQ----LHCK------SHEGEKC  282 (330)
Q Consensus       215 C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~--~~~----~h~~------~~~~~k~  282 (330)
                      |..|+..+.+...+..|+...|+..+.|+|+.|+..|.....|-.|||..|.+-  .|.    .|.+      ...+.++
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            445666677777777777777888899999999999999999999999844321  121    1221      1235678


Q ss_pred             cccCCCccccCChHHHHHHHHH--cCC-----------------------------------------CCCcccccCChh
Q psy9959         283 WKCELCPYASSSQRHLESHMLI--HTD-----------------------------------------QKPYLCDHCDQI  319 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~--H~~-----------------------------------------~~p~~C~~C~~~  319 (330)
                      |.|..|...|+....|.+|+..  |-.                                         +.++.|.+|++-
T Consensus       519 ~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~ye  598 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYE  598 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcch
Confidence            9999999999999999999863  211                                         123789999999


Q ss_pred             hHhhhhHhhcC
Q psy9959         320 RILICVIIAIR  330 (330)
Q Consensus       320 f~~~~~l~~H~  330 (330)
                      -....+|+.|+
T Consensus       599 tniarnlrihm  609 (1406)
T KOG1146|consen  599 TNIARNLRIHM  609 (1406)
T ss_pred             hhhhhcccccc
Confidence            99999999885

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.61  E-value=0.0019  Score=33.31  Aligned_cols=23  Identities=30%  Similarity=0.808  Sum_probs=15.1

Q ss_pred             ccccccCccccCHHHHHHHHHHhc
Q psy9959         242 HKCSICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       242 ~~C~~C~k~f~~~~~L~~H~~~h~  265 (330)
                      |+|+.|+.... ...|..|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56777777776 777777777765

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.44  E-value=0.00074  Score=36.05  Aligned_cols=22  Identities=32%  Similarity=0.570  Sum_probs=19.9

Q ss_pred             cccCCCccccCChHHHHHHHHH
Q psy9959         283 WKCELCPYASSSQRHLESHMLI  304 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~  304 (330)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6799999999999999999865

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.41  E-value=0.0017  Score=33.89  Aligned_cols=23  Identities=30%  Similarity=0.661  Sum_probs=15.5

Q ss_pred             ccccccCccccCHHHHHHHHHHh
Q psy9959         242 HKCSICDYASVELSKMRNHMRSH  264 (330)
Q Consensus       242 ~~C~~C~k~f~~~~~L~~H~~~h  264 (330)
                      |.|..|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            45777777777777777776543

>PRK04860 hypothetical protein; Provisional

Probab=96.08  E-value=0.0024  Score=50.29  Aligned_cols=38  Identities=29%  Similarity=0.488  Sum_probs=27.0

Q ss_pred             ceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCH
Q psy9959         212 PHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVEL  254 (330)
Q Consensus       212 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~  254 (330)
                      +|.|. |+.   ....+.+|.++ |+++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri-~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRV-VRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHH-hcCCccEECCCCCceeEEe
Confidence            57776 776   45567777775 7777778888887776543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.82  E-value=0.002  Score=59.80  Aligned_cols=138  Identities=22%  Similarity=0.331  Sum_probs=88.4

Q ss_pred             CCeeeccCcccccchhhhhhccc--cccCc--CceecC--ccccccCChHHHHHHHhhhcCCCCCccccc--cCccccCH
Q psy9959         183 RPHKCSVCERGFKTIASLQNHIN--THTGV--KPHKCK--YCESRFTTSGELVRHVRYKHTHEKPHKCSI--CDYASVEL  254 (330)
Q Consensus       183 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~k~f~~~  254 (330)
                      .++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....+.+|... |.+..++.|..  |.+.+...
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  366 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILL-HTSISPAKEKLLNSSSKFSPL  366 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCccc-ccCCCccccccccCccccccc
Confidence            35777777777777777777777  67777  777777  677777777777777774 66666665544  33333322


Q ss_pred             HHHHHHHHHhcCCCCceeeecccCCCCccccCC--CccccCChHHHHHHHHHcCCCCC--cccccCChhhHhhhhHhhc
Q psy9959         255 SKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL--CPYASSSQRHLESHMLIHTDQKP--YLCDHCDQIRILICVIIAI  329 (330)
Q Consensus       255 ~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~~p--~~C~~C~~~f~~~~~l~~H  329 (330)
                      ..-..+....        ........+.+.|..  |-..+.+...+..|...|...++  +.|..|++.|.....+..|
T Consensus       367 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (467)
T COG5048         367 LNNEPPQSLQ--------QYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPH  437 (467)
T ss_pred             cCCCCccchh--------hccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCccccccc
Confidence            2211011110        011111223344544  88888899999999988887774  6778899999887777665

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.71  E-value=0.0074  Score=52.16  Aligned_cols=122  Identities=23%  Similarity=0.423  Sum_probs=81.5

Q ss_pred             Ceeecc--CcccccchhhhhhccccccCcCceecCccc---ccc------CChHHHHHHHhhhcCCCC----CccccccC
Q psy9959         184 PHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCE---SRF------TTSGELVRHVRYKHTHEK----PHKCSICD  248 (330)
Q Consensus       184 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~---~~f------~~~~~l~~H~~~~H~~~~----~~~C~~C~  248 (330)
                      .|.|+.  |..+......|+.|.+..++  .+-|..|-   +.|      .+...|..|... -..+.    .-.|.+|.
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~--~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~-G~~e~GFKGHP~C~FC~  227 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG--FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNG-GLEEEGFKGHPLCIFCK  227 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC--cEEhHhhhcCcccCccceeeeecccccccccC-CccccCcCCCchhhhcc
Confidence            488885  77777778889999887544  36787774   233      344556666543 11111    22599999


Q ss_pred             ccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCcc-------ccCChHHHHHHHHHcCCCCCccccc--CC--
Q psy9959         249 YASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPY-------ASSSQRHLESHMLIHTDQKPYLCDH--CD--  317 (330)
Q Consensus       249 k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~-------~F~~~~~L~~H~~~H~~~~p~~C~~--C~--  317 (330)
                      +.|.+...|..|+|..|.                 .|-+|++       -|.+...|..|.+.-    .|.|.+  |-  
T Consensus       228 ~~FYdDDEL~~HcR~~HE-----------------~ChICD~v~p~~~QYFK~Y~~Le~HF~~~----hy~ct~qtc~~~  286 (493)
T COG5236         228 IYFYDDDELRRHCRLRHE-----------------ACHICDMVGPIRYQYFKSYEDLEAHFRNA----HYCCTFQTCRVG  286 (493)
T ss_pred             ceecChHHHHHHHHhhhh-----------------hhhhhhccCccchhhhhCHHHHHHHhhcC----ceEEEEEEEecC
Confidence            999999999999998653                 3777765       588888999998642    277743  32  


Q ss_pred             --hhhHhhhhHhhc
Q psy9959         318 --QIRILICVIIAI  329 (330)
Q Consensus       318 --~~f~~~~~l~~H  329 (330)
                        ..|.....|..|
T Consensus       287 k~~vf~~~~el~~h  300 (493)
T COG5236         287 KCYVFPYHTELLEH  300 (493)
T ss_pred             cEEEeccHHHHHHH
Confidence              345555555554

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.64  E-value=0.011  Score=30.82  Aligned_cols=21  Identities=29%  Similarity=0.479  Sum_probs=17.6

Q ss_pred             cccCCCccccCChHHHHHHHHH
Q psy9959         283 WKCELCPYASSSQRHLESHMLI  304 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~  304 (330)
                      ..|+.||+.| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3699999999 67789999864

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.58  E-value=0.0079  Score=31.97  Aligned_cols=22  Identities=23%  Similarity=0.691  Sum_probs=13.8

Q ss_pred             eeeccCcccccchhhhhhcccc
Q psy9959         185 HKCSVCERGFKTIASLQNHINT  206 (330)
Q Consensus       185 ~~C~~C~~~f~~~~~l~~H~~~  206 (330)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5566666666666666666654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482|consensus

Probab=95.53  E-value=0.013  Score=50.64  Aligned_cols=147  Identities=19%  Similarity=0.290  Sum_probs=86.5

Q ss_pred             CcccccccCcccC-ChhHHHHHHhh-hCC---------------------CCCeeeccCcccccchhhhhhcccc--ccC
Q psy9959         155 PAHMCNYCNYTSP-KRYLLARHLKS-HSE---------------------ERPHKCSVCERGFKTIASLQNHINT--HTG  209 (330)
Q Consensus       155 ~~~~C~~C~~~f~-~~~~l~~H~~~-h~~---------------------~~~~~C~~C~~~f~~~~~l~~H~~~--h~~  209 (330)
                      ....|-.|...+. .++....|+-. |.-                     -..+.|-.|.+.|..+..|+.||+.  |..
T Consensus       143 fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrr  222 (423)
T KOG2482|consen  143 FSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRR  222 (423)
T ss_pred             eeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCcc
Confidence            3457999976554 44555566643 321                     1247899999999999999999974  544


Q ss_pred             cCc--------eecC--ccccccCChHHHHHHH--hh--hcC------------CCCC--ccccccCccccCHHHHHHHH
Q psy9959         210 VKP--------HKCK--YCESRFTTSGELVRHV--RY--KHT------------HEKP--HKCSICDYASVELSKMRNHM  261 (330)
Q Consensus       210 ~~~--------~~C~--~C~~~f~~~~~l~~H~--~~--~H~------------~~~~--~~C~~C~k~f~~~~~L~~H~  261 (330)
                      ..|        |.=.  .-|++..   ....|.  .+  .+.            +..+  ..|-.|...+-+...|..||
T Consensus       223 inPknreYDkfyiINY~ev~ks~t---~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHm  299 (423)
T KOG2482|consen  223 INPKNREYDKFYIINYLEVGKSWT---IVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHM  299 (423)
T ss_pred             cCCCccccceEEEEeHhhcCCccc---hhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHH
Confidence            333        1111  1122211   111111  00  000            1122  58999999999999999999


Q ss_pred             HHhcCC------C-----Cceeeecc----cCCCCccccCCCccccCChHHHHHHHHHc
Q psy9959         262 RSHTGE------R-----PYQLHCKS----HEGEKCWKCELCPYASSSQRHLESHMLIH  305 (330)
Q Consensus       262 ~~h~~~------~-----~~~~h~~~----~~~~k~~~C~~C~~~F~~~~~L~~H~~~H  305 (330)
                      ...|.=      .     -|+ ..++    ....+.-.|-.|.-.|.....|..||.-+
T Consensus       300 k~vHe~Dl~Ki~sd~~Ln~Yq-rvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  300 KIVHEFDLLKIQSDYSLNFYQ-RVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             HHHHHhhHHhhccccccchhh-hhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            876531      1     111 0000    00112246889999999999999999643

>KOG2785|consensus

Probab=95.44  E-value=0.03  Score=49.39  Aligned_cols=49  Identities=18%  Similarity=0.239  Sum_probs=41.8

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCCC-----------------------CCcccccCC---hhhHhhhhHhhcC
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTDQ-----------------------KPYLCDHCD---QIRILICVIIAIR  330 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~~-----------------------~p~~C~~C~---~~f~~~~~l~~H~  330 (330)
                      |-.|-.|++.|.+...-..||..|||-                       .-|.|-.|+   +.|.+....++|.
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM  240 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHM  240 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHH
Confidence            457999999999999999999988873                       237899999   9999988888883

>TIGR00622 ssl1 transcription factor ssl1

Probab=95.02  E-value=0.029  Score=40.89  Aligned_cols=80  Identities=14%  Similarity=0.222  Sum_probs=45.7

Q ss_pred             CCeeeccCcccccchhhhhhccccccCc------------CceecCccccccCChHHHHHHHhhhcCCCCCccccccCcc
Q psy9959         183 RPHKCSVCERGFKTIASLQNHINTHTGV------------KPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYA  250 (330)
Q Consensus       183 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~------------~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~  250 (330)
                      -|..|+.|+-+.-....|.+-...-...            ..-.|--|...|........-   .-.....|.|+.|...
T Consensus        14 LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~~---~~~~~~~y~C~~C~~~   90 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPFD---ELKDSHRYVCAVCKNV   90 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCccccccc---ccccccceeCCCCCCc
Confidence            3566777766665555444321100001            112488888888754311100   0122346899999999


Q ss_pred             ccCHHHHHHHHHHhc
Q psy9959         251 SVELSKMRNHMRSHT  265 (330)
Q Consensus       251 f~~~~~L~~H~~~h~  265 (330)
                      |-..-++..|...|.
T Consensus        91 FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        91 FCVDCDVFVHESLHC  105 (112)
T ss_pred             cccccchhhhhhccC
Confidence            988888888887763

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2482|consensus

Probab=95.00  E-value=0.032  Score=48.29  Aligned_cols=48  Identities=21%  Similarity=0.232  Sum_probs=38.8

Q ss_pred             cccCCCccccCChHHHHHHHHHcCC---------------------------CCCcccccCChhhHhhhhHhhcC
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHTD---------------------------QKPYLCDHCDQIRILICVIIAIR  330 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~~---------------------------~~p~~C~~C~~~f~~~~~l~~H~  330 (330)
                      ..|-.|....-+...|..||++-|.                           .+.-.|-.|+..|-....|+.|.
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm  354 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHM  354 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhc
Confidence            5899999999999999999986432                           11235999999999999998873

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.92  E-value=0.019  Score=32.49  Aligned_cols=23  Identities=22%  Similarity=0.483  Sum_probs=20.5

Q ss_pred             ccccCCCccccCChHHHHHHHHH
Q psy9959         282 CWKCELCPYASSSQRHLESHMLI  304 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~  304 (330)
                      +|.|.+|++.|.+...+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            37799999999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893|consensus

Probab=94.79  E-value=0.013  Score=48.03  Aligned_cols=43  Identities=28%  Similarity=0.572  Sum_probs=36.1

Q ss_pred             ccccCcccCChhHHHHHHhhhCCCCCeeeccCcccccchhhhhhccc
Q psy9959         159 CNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHIN  205 (330)
Q Consensus       159 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  205 (330)
                      |.+|++.|.....|..|++.    +-|+|.+|.+.+.+--.|..|..
T Consensus        13 cwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcm   55 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCM   55 (341)
T ss_pred             eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehh
Confidence            99999999999999888764    45999999998888888888743

>KOG2893|consensus

Probab=94.68  E-value=0.0061  Score=49.89  Aligned_cols=43  Identities=30%  Similarity=0.611  Sum_probs=28.4

Q ss_pred             cCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHH
Q psy9959         215 CKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMR  262 (330)
Q Consensus       215 C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~  262 (330)
                      |.+|++.|....-|..|++..|     |+|.+|.|...+-..|..|..
T Consensus        13 cwycnrefddekiliqhqkakh-----fkchichkkl~sgpglsihcm   55 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAKH-----FKCHICHKKLFSGPGLSIHCM   55 (341)
T ss_pred             eeecccccchhhhhhhhhhhcc-----ceeeeehhhhccCCCceeehh
Confidence            6677777777777766666533     677777776666666666643

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.67  E-value=0.034  Score=28.89  Aligned_cols=19  Identities=21%  Similarity=0.604  Sum_probs=11.3

Q ss_pred             cccccCccccCHHHHHHHHH
Q psy9959         243 KCSICDYASVELSKMRNHMR  262 (330)
Q Consensus       243 ~C~~C~k~f~~~~~L~~H~~  262 (330)
                      .|+.||+.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            466666666 5555666654

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.60  E-value=0.018  Score=32.28  Aligned_cols=25  Identities=24%  Similarity=0.852  Sum_probs=20.3

Q ss_pred             cccCCCccccCChHHHHHHHHHcCCCCCcccccCChh
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQI  319 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~  319 (330)
                      |.|..||..+....            .++.||.||-.
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~~   26 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGAP   26 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCCc
Confidence            78999998876543            78999999864

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2785|consensus

Probab=94.46  E-value=0.081  Score=46.77  Aligned_cols=52  Identities=25%  Similarity=0.533  Sum_probs=43.5

Q ss_pred             ceecCccccccCChHHHHHHHhhhcCCC----------------------CCccccccC---ccccCHHHHHHHHHH
Q psy9959         212 PHKCKYCESRFTTSGELVRHVRYKHTHE----------------------KPHKCSICD---YASVELSKMRNHMRS  263 (330)
Q Consensus       212 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~----------------------~~~~C~~C~---k~f~~~~~L~~H~~~  263 (330)
                      |-.|-.|++.|.+...-..||...|.--                      .-|.|-.|+   +.|.+..+.+.||..
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            4679999999999999999998766422                      347899998   999999999999976

>KOG4173|consensus

Probab=94.25  E-value=0.019  Score=45.97  Aligned_cols=46  Identities=28%  Similarity=0.665  Sum_probs=21.9

Q ss_pred             eeecc--CcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHh
Q psy9959         185 HKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVR  233 (330)
Q Consensus       185 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  233 (330)
                      |.|++  |...|.....+..|..+-++   -.|..|.+.|.+...|..|+.
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~  127 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHIL  127 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHH
Confidence            44544  44455555444444433222   235555555555555555544

>TIGR00622 ssl1 transcription factor ssl1

Probab=94.18  E-value=0.049  Score=39.73  Aligned_cols=96  Identities=21%  Similarity=0.361  Sum_probs=57.9

Q ss_pred             eeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhhcC------CCCC-------ccccccCccc
Q psy9959         185 HKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHT------HEKP-------HKCSICDYAS  251 (330)
Q Consensus       185 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~------~~~~-------~~C~~C~k~f  251 (330)
                      |.|+.|+...              -+-|..|+.|+-+......|.|-.  +|-      .+.+       ..|--|.+.|
T Consensus         2 Y~CPrC~skv--------------C~LP~~CpiCgLtLVss~HLARSy--HHLfPl~~f~ev~~~~~~~~~~C~~C~~~f   65 (112)
T TIGR00622         2 YFCPQCRAKV--------------CELPVECPICGLTLILSTHLARSY--HHLFPLKAFQEIPLEEYNGSRFCFGCQGPF   65 (112)
T ss_pred             ccCCCCCCCc--------------cCCCCcCCcCCCEEeccchHHHhh--hccCCCcccccccccccCCCCcccCcCCCC
Confidence            6777776543              235678999998888888887764  231      1111       1377777777


Q ss_pred             cCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccCC
Q psy9959         252 VELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCD  317 (330)
Q Consensus       252 ~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~  317 (330)
                      .......      .++         -.....|.|+.|...|--.-.+-.|..+|      .|+.|.
T Consensus        66 ~~~~~~~------~~~---------~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh------~CPGC~  110 (112)
T TIGR00622        66 PKPPVSP------FDE---------LKDSHRYVCAVCKNVFCVDCDVFVHESLH------CCPGCI  110 (112)
T ss_pred             CCccccc------ccc---------cccccceeCCCCCCccccccchhhhhhcc------CCcCCC
Confidence            6543111      010         11223477888888888777777777666      366664

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.71  E-value=0.13  Score=37.89  Aligned_cols=26  Identities=19%  Similarity=0.544  Sum_probs=23.7

Q ss_pred             cccc----CCCccccCChHHHHHHHHHcCC
Q psy9959         282 CWKC----ELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       282 ~~~C----~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      -|.|    ..|+..+.+...+++|++.+||
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            3889    9999999999999999998775

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=93.67  E-value=0.04  Score=40.26  Aligned_cols=30  Identities=17%  Similarity=0.349  Sum_probs=25.2

Q ss_pred             cccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhHhh
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILI  323 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~  323 (330)
                      ..|+.||++|...           +..|-.||+||..|...
T Consensus        10 R~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            4699999999864           45799999999998765

The function of members of this family is unknown.

>KOG4173|consensus

Probab=93.43  E-value=0.029  Score=44.97  Aligned_cols=80  Identities=28%  Similarity=0.429  Sum_probs=57.5

Q ss_pred             cccccc--cCcccCChhHHHHHHhhhCCCCCeeeccCcccccchhhhhhcccc-c---------cCcCceecC--ccccc
Q psy9959         156 AHMCNY--CNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINT-H---------TGVKPHKCK--YCESR  221 (330)
Q Consensus       156 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h---------~~~~~~~C~--~C~~~  221 (330)
                      .+.|+.  |...|.....+..|...-++   ..|..|.+.|.+..-|..|+.. |         .|.-.|.|-  -|+..
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEK  155 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhh
Confidence            377876  77788777777777655333   4799999999999999999853 2         244457774  37777


Q ss_pred             cCChHHHHHHHhhhcCC
Q psy9959         222 FTTSGELVRHVRYKHTH  238 (330)
Q Consensus       222 f~~~~~l~~H~~~~H~~  238 (330)
                      |.+....+.|+-..|.-
T Consensus       156 FkT~r~RkdH~I~~Hk~  172 (253)
T KOG4173|consen  156 FKTSRDRKDHMIRMHKY  172 (253)
T ss_pred             hhhhhhhhhHHHHhccC
Confidence            77777777777666643

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.01  E-value=0.05  Score=33.68  Aligned_cols=32  Identities=16%  Similarity=0.393  Sum_probs=26.0

Q ss_pred             cccCCCCccccCCCccccCChHHHHHHHHHcC
Q psy9959         275 KSHEGEKCWKCELCPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       275 ~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~  306 (330)
                      ....|+--+.|+.||+.|.....+.+|...-|
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            34456777899999999999999999995433

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.95  E-value=0.076  Score=29.98  Aligned_cols=23  Identities=13%  Similarity=0.476  Sum_probs=17.8

Q ss_pred             CccccccCccccCHHHHHHHHHH
Q psy9959         241 PHKCSICDYASVELSKMRNHMRS  263 (330)
Q Consensus       241 ~~~C~~C~k~f~~~~~L~~H~~~  263 (330)
                      +|.|..|++.|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            47788888888888888888754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=92.25  E-value=0.073  Score=29.99  Aligned_cols=26  Identities=27%  Similarity=0.843  Sum_probs=19.7

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCCCCCcccccCChh
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQI  319 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~  319 (330)
                      .|.|..||..+...            ..|..||.||..
T Consensus         2 ~~~C~~CG~i~~g~------------~~p~~CP~Cg~~   27 (34)
T cd00729           2 VWVCPVCGYIHEGE------------EAPEKCPICGAP   27 (34)
T ss_pred             eEECCCCCCEeECC------------cCCCcCcCCCCc
Confidence            37899999876543            267899999963

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=91.88  E-value=0.34  Score=35.67  Aligned_cols=25  Identities=32%  Similarity=0.706  Sum_probs=23.4

Q ss_pred             ccc----cccCccccCHHHHHHHHHHhcC
Q psy9959         242 HKC----SICDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       242 ~~C----~~C~k~f~~~~~L~~H~~~h~~  266 (330)
                      |.|    ..|++.+.+...+.+|++.+||
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            889    9999999999999999998875

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=91.23  E-value=0.13  Score=38.17  Aligned_cols=30  Identities=7%  Similarity=-0.069  Sum_probs=24.9

Q ss_pred             cccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhHhh
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILI  323 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~  323 (330)
                      ..|+.||++|...           +..|-.|++||..|...
T Consensus        10 r~Cp~cg~kFYDL-----------nk~p~vcP~cg~~~~~~   39 (129)
T TIGR02300        10 RICPNTGSKFYDL-----------NRRPAVSPYTGEQFPPE   39 (129)
T ss_pred             ccCCCcCcccccc-----------CCCCccCCCcCCccCcc
Confidence            4699999999754           45799999999998655

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=89.64  E-value=0.18  Score=31.28  Aligned_cols=26  Identities=15%  Similarity=0.272  Sum_probs=15.9

Q ss_pred             CCCCccccccCccccCHHHHHHHHHH
Q psy9959         238 HEKPHKCSICDYASVELSKMRNHMRS  263 (330)
Q Consensus       238 ~~~~~~C~~C~k~f~~~~~L~~H~~~  263 (330)
                      |+.-+.|+.||..|....++.+|...
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhH
Confidence            44556666666666666666666544

>KOG2186|consensus

Probab=88.99  E-value=0.2  Score=41.72  Aligned_cols=50  Identities=16%  Similarity=0.349  Sum_probs=29.4

Q ss_pred             eecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcC
Q psy9959         213 HKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       213 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~  266 (330)
                      |.|..||....-. .+.+|+...+.  ..|.|-.|++.|.. .++..|...-+.
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn--~~fSCIDC~k~F~~-~sYknH~kCITE   53 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN--AYFSCIDCGKTFER-VSYKNHTKCITE   53 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC--CeeEEeeccccccc-chhhhhhhhcch
Confidence            6666666665433 45566665332  45667777777766 566666655443

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=88.77  E-value=0.32  Score=40.73  Aligned_cols=13  Identities=31%  Similarity=0.623  Sum_probs=7.6

Q ss_pred             CCcccccCChhhH
Q psy9959         309 KPYLCDHCDQIRI  321 (330)
Q Consensus       309 ~p~~C~~C~~~f~  321 (330)
                      +++.||.||.-..
T Consensus       208 k~~PCPKCg~et~  220 (314)
T PF06524_consen  208 KPIPCPKCGYETQ  220 (314)
T ss_pred             CCCCCCCCCCccc
Confidence            5566666665443

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>COG5151 SSL1 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 [Transcription / DNA replication, recombination, and repair]

Probab=88.46  E-value=0.29  Score=42.02  Aligned_cols=80  Identities=18%  Similarity=0.311  Sum_probs=47.4

Q ss_pred             CCeeeccCcccccchhhhhhcccc----------ccCc--CceecCccccccCChHHHHHHHhhhcCCCCCccccccCcc
Q psy9959         183 RPHKCSVCERGFKTIASLQNHINT----------HTGV--KPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYA  250 (330)
Q Consensus       183 ~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~  250 (330)
                      -|..|+.|.-..-....|.+-...          -.+.  +.-.|-.|...|.....   |.--.-+....|+|+.|...
T Consensus       321 LPi~CP~Csl~LilsthLarSyhhL~PLk~f~E~p~~~~~ks~~Cf~CQ~~fp~~~~---~~~~~~~ss~rY~Ce~CK~~  397 (421)
T COG5151         321 LPISCPICSLQLILSTHLARSYHHLYPLKPFVEKPEGTNPKSTHCFVCQGPFPKPPV---SPFDESTSSGRYQCELCKST  397 (421)
T ss_pred             CCccCcchhHHHHHHHHHHHHHHhhccCcccccccCCCCCCCccceeccCCCCCCCC---Ccccccccccceechhhhhh
Confidence            356788887655444333322111          1111  12347778777765432   11111223456999999999


Q ss_pred             ccCHHHHHHHHHHhc
Q psy9959         251 SVELSKMRNHMRSHT  265 (330)
Q Consensus       251 f~~~~~L~~H~~~h~  265 (330)
                      |-..-+...|...|.
T Consensus       398 FC~dCdvfiHe~Lh~  412 (421)
T COG5151         398 FCSDCDVFIHETLHF  412 (421)
T ss_pred             hhhhhHHHHHHHHhh
Confidence            999999999998873

>smart00531 TFIIE Transcription initiation factor IIE

Probab=87.88  E-value=0.26  Score=38.47  Aligned_cols=36  Identities=14%  Similarity=0.380  Sum_probs=25.1

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCCCcccccCChhh
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIR  320 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f  320 (330)
                      .-|.|+.|+..|.....+..   .+. ...|.||.||...
T Consensus        98 ~~Y~Cp~C~~~y~~~ea~~~---~d~-~~~f~Cp~Cg~~l  133 (147)
T smart00531       98 AYYKCPNCQSKYTFLEANQL---LDM-DGTFTCPRCGEEL  133 (147)
T ss_pred             cEEECcCCCCEeeHHHHHHh---cCC-CCcEECCCCCCEE
Confidence            34899999999996555432   011 3349999999754

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=87.78  E-value=0.21  Score=28.81  Aligned_cols=34  Identities=12%  Similarity=0.282  Sum_probs=24.3

Q ss_pred             cccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhH
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRI  321 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~  321 (330)
                      +.|+.|+..|.-.....     ........|+.|+..|.
T Consensus         3 ~~CP~C~~~~~v~~~~~-----~~~~~~v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQL-----GANGGKVRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHHc-----CCCCCEEECCCCCCEEE
Confidence            57999999998665532     12223589999998874

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=87.71  E-value=0.44  Score=34.87  Aligned_cols=13  Identities=31%  Similarity=0.761  Sum_probs=6.0

Q ss_pred             CCeeeccCccccc
Q psy9959         183 RPHKCSVCERGFK  195 (330)
Q Consensus       183 ~~~~C~~C~~~f~  195 (330)
                      .|..|+.||..|.
T Consensus        25 ~PivCP~CG~~~~   37 (108)
T PF09538_consen   25 DPIVCPKCGTEFP   37 (108)
T ss_pred             CCccCCCCCCccC
Confidence            3444555544443

The function of members of this family is unknown.

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=87.34  E-value=0.29  Score=25.67  Aligned_cols=10  Identities=30%  Similarity=0.687  Sum_probs=6.4

Q ss_pred             ccCCCccccC
Q psy9959         284 KCELCPYASS  293 (330)
Q Consensus       284 ~C~~C~~~F~  293 (330)
                      .|+.||..|.
T Consensus        16 ~Cp~CG~~F~   25 (26)
T PF10571_consen   16 FCPHCGYDFE   25 (26)
T ss_pred             cCCCCCCCCc
Confidence            3777776664

Several members are annotated as putative helicases.

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=87.26  E-value=0.34  Score=29.06  Aligned_cols=26  Identities=15%  Similarity=0.453  Sum_probs=20.8

Q ss_pred             cccCCCccccCChHHHHHHHHHcCCCCCcccccCChh
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQI  319 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~  319 (330)
                      |.|..||..|.-.           ...+..|+.||..
T Consensus         3 Y~C~~Cg~~~~~~-----------~~~~irC~~CG~r   28 (44)
T smart00659        3 YICGECGRENEIK-----------SKDVVRCRECGYR   28 (44)
T ss_pred             EECCCCCCEeecC-----------CCCceECCCCCce
Confidence            7899999988844           3456899999964

present in RNA polymerase I, II and III

>PF15269 zf-C2H2_7: Zinc-finger

Probab=86.89  E-value=0.51  Score=27.87  Aligned_cols=22  Identities=36%  Similarity=0.834  Sum_probs=20.4

Q ss_pred             cccCCCccccCChHHHHHHHHH
Q psy9959         283 WKCELCPYASSSQRHLESHMLI  304 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~  304 (330)
                      |+|-.|..+..-+++|..||+.
T Consensus        21 ykcfqcpftc~~kshl~nhmky   42 (54)
T PF15269_consen   21 YKCFQCPFTCNEKSHLFNHMKY   42 (54)
T ss_pred             ceeecCCcccchHHHHHHHHHH
Confidence            8899999999999999999974

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=86.89  E-value=0.38  Score=37.99  Aligned_cols=29  Identities=14%  Similarity=0.365  Sum_probs=24.7

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCCCCCcccccCChh
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQI  319 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~  319 (330)
                      -|.|+.|+..|+.-.++.         --|.||.||..
T Consensus       109 ~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~  137 (158)
T TIGR00373       109 FFICPNMCVRFTFNEAME---------LNFTCPRCGAM  137 (158)
T ss_pred             eEECCCCCcEeeHHHHHH---------cCCcCCCCCCE
Confidence            388999999999988885         25999999965

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=86.45  E-value=0.32  Score=39.23  Aligned_cols=30  Identities=17%  Similarity=0.492  Sum_probs=24.5

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCCCCCcccccCChhh
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIR  320 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f  320 (330)
                      -|.|+.|++.|+.-..+.         --|.|+.||...
T Consensus       117 ~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L  146 (178)
T PRK06266        117 FFFCPNCHIRFTFDEAME---------YGFRCPQCGEML  146 (178)
T ss_pred             EEECCCCCcEEeHHHHhh---------cCCcCCCCCCCC
Confidence            388999999999888763         259999999643

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=86.37  E-value=0.14  Score=42.64  Aligned_cols=13  Identities=38%  Similarity=0.795  Sum_probs=9.9

Q ss_pred             ccccccCccccCH
Q psy9959         242 HKCSICDYASVEL  254 (330)
Q Consensus       242 ~~C~~C~k~f~~~  254 (330)
                      ..|+.||.+|...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            4799999887644

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=86.03  E-value=0.43  Score=27.41  Aligned_cols=34  Identities=12%  Similarity=0.303  Sum_probs=25.1

Q ss_pred             cccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhH
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRI  321 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~  321 (330)
                      ..|+.|+..|.-...-     +-.+.+..+|+.|+..|.
T Consensus         3 i~CP~C~~~f~v~~~~-----l~~~~~~vrC~~C~~~f~   36 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDDK-----LPAGGRKVRCPKCGHVFR   36 (37)
T ss_pred             EECCCCCceEEcCHHH-----cccCCcEEECCCCCcEee
Confidence            3699999999876542     123455789999998884

>COG1996 RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription]

Probab=85.83  E-value=0.35  Score=29.58  Aligned_cols=28  Identities=18%  Similarity=0.454  Sum_probs=20.7

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCCCCCcccccCChh
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQI  319 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~  319 (330)
                      .|.|..||+.|..          -.......|++||..
T Consensus         6 ~Y~C~~Cg~~~~~----------~~~~~~irCp~Cg~r   33 (49)
T COG1996           6 EYKCARCGREVEL----------DQETRGIRCPYCGSR   33 (49)
T ss_pred             EEEhhhcCCeeeh----------hhccCceeCCCCCcE
Confidence            4899999999921          123456899999964

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=85.80  E-value=0.51  Score=37.29  Aligned_cols=23  Identities=35%  Similarity=1.126  Sum_probs=19.9

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCCCCCcccccCC
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCD  317 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~  317 (330)
                      .|.|++||..             |.|+.|-.||.||
T Consensus       134 ~~vC~vCGy~-------------~~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYT-------------HEGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCc-------------ccCCCCCcCCCCC
Confidence            6899999963             5678899999999

>KOG2807|consensus

Probab=85.24  E-value=1.1  Score=39.02  Aligned_cols=26  Identities=15%  Similarity=0.180  Sum_probs=22.4

Q ss_pred             CCccccccCccccCHHHHHHHHHHhc
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~  265 (330)
                      ..|.|..|...|-..-+...|...|.
T Consensus       344 ~~y~C~~Ck~~FCldCDv~iHesLh~  369 (378)
T KOG2807|consen  344 GRYRCESCKNVFCLDCDVFIHESLHN  369 (378)
T ss_pred             CcEEchhccceeeccchHHHHhhhhc
Confidence            45899999999999999999988873

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=84.97  E-value=0.76  Score=27.53  Aligned_cols=25  Identities=24%  Similarity=0.388  Sum_probs=16.5

Q ss_pred             CCccccCCCccccCCh----HHHHHHHHH
Q psy9959         280 EKCWKCELCPYASSSQ----RHLESHMLI  304 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~----~~L~~H~~~  304 (330)
                      ....+|.+|++.+...    +.|.+|++.
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~~   42 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLKK   42 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHHH
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhhh
Confidence            4446899999998874    899999943

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=84.70  E-value=0.73  Score=29.22  Aligned_cols=33  Identities=18%  Similarity=0.303  Sum_probs=21.7

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCCCCCcccccCChh
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQI  319 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~  319 (330)
                      .|.|+.||..-..+..--   |.+  ..+|.|+.||..
T Consensus        27 ~F~CPnCGe~~I~Rc~~C---Rk~--g~~Y~Cp~CGF~   59 (61)
T COG2888          27 KFPCPNCGEVEIYRCAKC---RKL--GNPYRCPKCGFE   59 (61)
T ss_pred             EeeCCCCCceeeehhhhH---HHc--CCceECCCcCcc
Confidence            388999996555443221   222  458999999953

>smart00614 ZnF_BED BED zinc finger

Probab=84.32  E-value=0.8  Score=28.28  Aligned_cols=24  Identities=29%  Similarity=0.495  Sum_probs=19.6

Q ss_pred             cccCCCccccCCh-----HHHHHHHH-HcC
Q psy9959         283 WKCELCPYASSSQ-----RHLESHML-IHT  306 (330)
Q Consensus       283 ~~C~~C~~~F~~~-----~~L~~H~~-~H~  306 (330)
                      -.|.+|++.+...     ++|.+|++ .|.
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~~~h~   48 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLRRKHP   48 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHHhHCc
Confidence            4699999999765     69999998 563

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>COG4530 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=84.23  E-value=0.6  Score=33.52  Aligned_cols=29  Identities=3%  Similarity=-0.204  Sum_probs=23.6

Q ss_pred             ccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhHhh
Q psy9959         284 KCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILI  323 (330)
Q Consensus       284 ~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~  323 (330)
                      .|+.||+.|...           +..|..||+||++|+..
T Consensus        11 idPetg~KFYDL-----------NrdPiVsPytG~s~P~s   39 (129)
T COG4530          11 IDPETGKKFYDL-----------NRDPIVSPYTGKSYPRS   39 (129)
T ss_pred             cCccccchhhcc-----------CCCccccCcccccchHH
Confidence            499999999743           46799999999999654

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=84.10  E-value=0.22  Score=30.26  Aligned_cols=30  Identities=17%  Similarity=0.281  Sum_probs=21.9

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhH
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRI  321 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~  321 (330)
                      .|.|+.||..|......          ....|+.||..+.
T Consensus         3 ~y~C~~CG~~~~~~~~~----------~~~~Cp~CG~~~~   32 (46)
T PRK00398          3 EYKCARCGREVELDEYG----------TGVRCPYCGYRIL   32 (46)
T ss_pred             EEECCCCCCEEEECCCC----------CceECCCCCCeEE
Confidence            48899999988754221          1689999997654

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=84.02  E-value=0.51  Score=39.35  Aligned_cols=43  Identities=28%  Similarity=0.518  Sum_probs=24.2

Q ss_pred             CCeeeccCcccccchhhhhhcccc----------ccCcCc-----eecCccccccCCh
Q psy9959         183 RPHKCSVCERGFKTIASLQNHINT----------HTGVKP-----HKCKYCESRFTTS  225 (330)
Q Consensus       183 ~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~-----~~C~~C~~~f~~~  225 (330)
                      +.+.|+.|++.|.+..-+....+.          ..+..|     ..|+.||..|...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            445677777766665444433332          112222     5799999876644

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=84.00  E-value=0.24  Score=30.93  Aligned_cols=29  Identities=14%  Similarity=0.460  Sum_probs=21.1

Q ss_pred             cccCCCccccCChHHHHHHHHHcCCCCCcccccCCh
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQ  318 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~  318 (330)
                      |+|..||..|.....+      +. ..+-.|+.||.
T Consensus         6 y~C~~Cg~~fe~~~~~------~~-~~~~~CP~Cg~   34 (52)
T TIGR02605         6 YRCTACGHRFEVLQKM------SD-DPLATCPECGG   34 (52)
T ss_pred             EEeCCCCCEeEEEEec------CC-CCCCCCCCCCC
Confidence            8999999999855322      11 35567999996

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=83.97  E-value=0.58  Score=34.84  Aligned_cols=10  Identities=20%  Similarity=0.408  Sum_probs=3.9

Q ss_pred             eecCcccccc
Q psy9959         213 HKCKYCESRF  222 (330)
Q Consensus       213 ~~C~~C~~~f  222 (330)
                      ..|++||..|
T Consensus        27 ~vcP~cg~~~   36 (129)
T TIGR02300        27 AVSPYTGEQF   36 (129)
T ss_pred             ccCCCcCCcc
Confidence            3344444333

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=83.79  E-value=0.23  Score=29.12  Aligned_cols=29  Identities=21%  Similarity=0.537  Sum_probs=21.5

Q ss_pred             cccCCCccccCChHHHHHHHHHcCCCCCcccccCCh
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQ  318 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~  318 (330)
                      |+|..||..|.-....      . ....-.|+.||.
T Consensus         6 y~C~~Cg~~fe~~~~~------~-~~~~~~CP~Cg~   34 (41)
T smart00834        6 YRCEDCGHTFEVLQKI------S-DDPLATCPECGG   34 (41)
T ss_pred             EEcCCCCCEEEEEEec------C-CCCCCCCCCCCC
Confidence            8899999998755433      1 145678999997

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>smart00531 TFIIE Transcription initiation factor IIE

Probab=83.33  E-value=1.5  Score=34.20  Aligned_cols=36  Identities=17%  Similarity=0.416  Sum_probs=19.5

Q ss_pred             CCCeeeccCcccccchhhhhh-ccccccCcCceecCcccccc
Q psy9959         182 ERPHKCSVCERGFKTIASLQN-HINTHTGVKPHKCKYCESRF  222 (330)
Q Consensus       182 ~~~~~C~~C~~~f~~~~~l~~-H~~~h~~~~~~~C~~C~~~f  222 (330)
                      ...|.|+.|+..|.....+.. +.     ...|.|+.||...
T Consensus        97 ~~~Y~Cp~C~~~y~~~ea~~~~d~-----~~~f~Cp~Cg~~l  133 (147)
T smart00531       97 NAYYKCPNCQSKYTFLEANQLLDM-----DGTFTCPRCGEEL  133 (147)
T ss_pred             CcEEECcCCCCEeeHHHHHHhcCC-----CCcEECCCCCCEE
Confidence            345777777776665443332 11     1237777776554

>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]

Probab=83.20  E-value=1.1  Score=44.19  Aligned_cols=13  Identities=23%  Similarity=0.657  Sum_probs=7.8

Q ss_pred             CCCCccccccCcc
Q psy9959         238 HEKPHKCSICDYA  250 (330)
Q Consensus       238 ~~~~~~C~~C~k~  250 (330)
                      ...|..|+.||..
T Consensus       472 ~~~p~~Cp~Cgs~  484 (730)
T COG1198         472 EPIPQSCPECGSE  484 (730)
T ss_pred             CCCCCCCCCCCCC
Confidence            3456667777654

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=82.91  E-value=1.2  Score=25.39  Aligned_cols=33  Identities=18%  Similarity=0.545  Sum_probs=16.1

Q ss_pred             eecCccccccCChHHHHHHHhhhcCCCCCccccccCccc
Q psy9959         213 HKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYAS  251 (330)
Q Consensus       213 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f  251 (330)
                      ..|+.|+..|.-.....      -......+|+.|+..|
T Consensus         3 i~Cp~C~~~y~i~d~~i------p~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEKI------PPKGRKVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHHC------CCCCcEEECCCCCCEe
Confidence            35666666655444321      1223345666666555

>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]

Probab=82.44  E-value=0.37  Score=47.47  Aligned_cols=36  Identities=19%  Similarity=0.424  Sum_probs=22.7

Q ss_pred             ccCCCccccC---ChHHHHHHHHHcCCCCCcccccCChh
Q psy9959         284 KCELCPYASS---SQRHLESHMLIHTDQKPYLCDHCDQI  319 (330)
Q Consensus       284 ~C~~C~~~F~---~~~~L~~H~~~H~~~~p~~C~~C~~~  319 (330)
                      +|+.|+..++   ....|.-|.--|....|..|+.||-.
T Consensus       446 ~Cp~Cd~~lt~H~~~~~L~CH~Cg~~~~~p~~Cp~Cgs~  484 (730)
T COG1198         446 ECPNCDSPLTLHKATGQLRCHYCGYQEPIPQSCPECGSE  484 (730)
T ss_pred             cCCCCCcceEEecCCCeeEeCCCCCCCCCCCCCCCCCCC
Confidence            4666665443   23344445444566788999999965

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=82.08  E-value=0.43  Score=32.87  Aligned_cols=11  Identities=27%  Similarity=0.543  Sum_probs=5.3

Q ss_pred             ccccccCcccc
Q psy9959         242 HKCSICDYASV  252 (330)
Q Consensus       242 ~~C~~C~k~f~  252 (330)
                      +.|..||..|.
T Consensus        54 W~C~kCg~~fA   64 (89)
T COG1997          54 WKCRKCGAKFA   64 (89)
T ss_pred             EEcCCCCCeec
Confidence            45555554443

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=81.73  E-value=0.37  Score=37.75  Aligned_cols=20  Identities=20%  Similarity=0.529  Sum_probs=14.6

Q ss_pred             CeeeccCcccccchhhhhhc
Q psy9959         184 PHKCSVCERGFKTIASLQNH  203 (330)
Q Consensus       184 ~~~C~~C~~~f~~~~~l~~H  203 (330)
                      .+.|+.||++|.+...+..-
T Consensus        28 ~~~c~~c~~~f~~~e~~~~~   47 (154)
T PRK00464         28 RRECLACGKRFTTFERVELV   47 (154)
T ss_pred             eeeccccCCcceEeEeccCc
Confidence            37899999988877655433

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=81.59  E-value=1.6  Score=34.47  Aligned_cols=31  Identities=13%  Similarity=0.216  Sum_probs=17.7

Q ss_pred             CCCeeeccCcccccchhhhhhccccccCcCceecCccccc
Q psy9959         182 ERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESR  221 (330)
Q Consensus       182 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  221 (330)
                      ..-|.|+.|+..|.....+.         ..|.|+.||..
T Consensus       107 ~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~  137 (158)
T TIGR00373       107 NMFFICPNMCVRFTFNEAME---------LNFTCPRCGAM  137 (158)
T ss_pred             CCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCE
Confidence            34466666666665555553         13666666654

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>KOG2186|consensus

Probab=81.50  E-value=0.69  Score=38.67  Aligned_cols=48  Identities=23%  Similarity=0.474  Sum_probs=36.0

Q ss_pred             ccccccCcccCChhHHHHHHhhhCCCCCeeeccCcccccchhhhhhccccc
Q psy9959         157 HMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTH  207 (330)
Q Consensus       157 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  207 (330)
                      |.|..||..... -.+.+|+..-++ .-|.|-.|++.|.. .++..|..--
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kCI   51 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKCI   51 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhhhhc
Confidence            789999987754 456778877666 56899999999987 6677776543

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=81.42  E-value=0.59  Score=36.58  Aligned_cols=16  Identities=38%  Similarity=0.731  Sum_probs=12.3

Q ss_pred             eecCccccccCChHHH
Q psy9959         213 HKCKYCESRFTTSGEL  228 (330)
Q Consensus       213 ~~C~~C~~~f~~~~~l  228 (330)
                      ++|+.||++|.+...+
T Consensus        29 ~~c~~c~~~f~~~e~~   44 (154)
T PRK00464         29 RECLACGKRFTTFERV   44 (154)
T ss_pred             eeccccCCcceEeEec
Confidence            7888999888776544

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=81.03  E-value=0.43  Score=28.31  Aligned_cols=29  Identities=21%  Similarity=0.621  Sum_probs=22.2

Q ss_pred             cccCCCccccCChHHHHHHHHHcCCCCCcccccCCh
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQ  318 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~  318 (330)
                      |+|..||..|.....+      .. ..+-.|+.||.
T Consensus         6 y~C~~Cg~~fe~~~~~------~~-~~~~~CP~Cg~   34 (42)
T PF09723_consen    6 YRCEECGHEFEVLQSI------SE-DDPVPCPECGS   34 (42)
T ss_pred             EEeCCCCCEEEEEEEc------CC-CCCCcCCCCCC
Confidence            8999999999865442      22 56689999997

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PF08274 PhnA_Zn_Ribbon: PhnA Zinc-Ribbon ; InterPro: IPR013987 The PhnA protein family includes the uncharacterised Escherichia coli protein PhnA and its homologues

Probab=80.81  E-value=0.49  Score=25.73  Aligned_cols=26  Identities=27%  Similarity=0.615  Sum_probs=13.9

Q ss_pred             ccCCCccccCChHHHHHHHHHcCCCCCcccccCChhh
Q psy9959         284 KCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIR  320 (330)
Q Consensus       284 ~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f  320 (330)
                      +|+.|+..+..           ....-|.|+.|+..|
T Consensus         4 ~Cp~C~se~~y-----------~D~~~~vCp~C~~ew   29 (30)
T PF08274_consen    4 KCPLCGSEYTY-----------EDGELLVCPECGHEW   29 (30)
T ss_dssp             --TTT-----E-----------E-SSSEEETTTTEEE
T ss_pred             CCCCCCCccee-----------ccCCEEeCCcccccC
Confidence            59999988877           345569999998654

The E. coli phnA gene is part of a large operon associated with alkylphosphonate uptake and carbon-phosphorus bond cleavage []. The protein is not related to the characterised phosphonoacetate hydrolase designated PhnA []. This entry represents the N-terminal domain of PhnA, which is predicted to form a zinc-ribbon.; PDB: 2AKL_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	330
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		8e-21
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-15
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-12
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-11
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-06
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-11
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		5e-11
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		8e-09
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		4e-10
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		1e-04
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		8e-10
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		9e-10
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		1e-09
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-09
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		7e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		6e-09
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		3e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		7e-09
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-06
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		7e-09
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-08
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		7e-08
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-07
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		2e-07
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-07
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		6e-07
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		1e-06
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-04
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		3e-06
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		3e-06
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		1e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		5e-04
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		2e-05
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		2e-05
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-05
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		5e-05
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		4e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		5e-05
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		2e-04
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		2e-04
1bbo_A	57	High-Resolution Solution Structure Of The Double Cy		5e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 97.8 bits (242), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 182 ERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 241
           E+P+ C  C + F     L  H  THTG KP+KC  C   F+   +L RH R  HT EKP
Sbjct: 19  EKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQR-THTGEKP 77
Query: 242 HKCSICDYASVELSKMRNHMRSHTGERPY---------------QLHCKSHEGEKCWKCE 286
           +KC  C  +  + + +R H R+HTGE+PY               + H ++H GEK +KC 
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP 137
Query: 287 LCPYASSSQRHLESHMLIHTDQKPYLCDHCDQ 318
            C  + S + +L +H   HT +KPY C  C +
Sbjct: 138 ECGKSFSREDNLHTHQRTHTGEKPYKCPECGK 169

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 178 SHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHT 237
           S     PHKC VC + F     L+ H+  HTGVKP+KCK C+     S  L +H+R  H+
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI-HS 60
Query: 238 HEKPHKCSICDYASVELSKMRNHMRSHTGE 267
            E+P KC IC YAS   S++  H+RSHTG+
Sbjct: 61  DERPFKCQICPYASRNSSQLTVHLRSHTGD 90

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 15/100 (15%)
Query: 212 PHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
           PHKC+ C   F+   +L  H+R  HT  KP+KC  CDYA+ + S +  H+R H+ ERP+ 
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRC-HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPF- 65
Query: 272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHT-DQKP 310
                       KC++CPYAS +   L  H+  HT D  P
Sbjct: 66  ------------KCQICPYASRNSSQLTVHLRSHTGDSGP 93

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 180 SEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYK 235
           SE+RP  C+   C + +  ++ LQ H   HTG KP++C +  CE RF+ S +L RH R +
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-R 60
Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY 270
           HT  KP +C  C         ++ H R+HTGE+P+
Sbjct: 61  HTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPF 95

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 18/107 (16%)
Query: 211 KPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHTG 266
           +P  C Y  C  R+     L  H R KHT EKP++C    C+       +++ H R HTG
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63
Query: 267 ERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
            +P+Q             C+ C    S   HL++H   HT +KP+ C
Sbjct: 64  VKPFQ-------------CKTCQRKFSRSDHLKTHTRTHTGEKPFSC 97

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 187 CSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI 246
           C +C + FK  ++L  H+  H+  +P+ C+YC  RF    ++ +H  + HT EKPHKC +
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT-FIHTGEKPHKCQV 62
Query: 247 CDYASVELSKMRNHMRSHTG 266
           C  A  + S +  H R HTG
Sbjct: 63  CGKAFSQSSNLITHSRKHTG 82

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 182 ERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 241
           E+P+KC  C + F   ++LQ H  THTG KP+KC  C   F+ S +L +H R  HT EKP
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRT-HTGEKP 60
Query: 242 HKCSICDYASVELSKMRNHMRSHTGER 268
           +KC  C  +      +  H R+H  ++
Sbjct: 61  YKCPECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY 270
           KP+KC  C   F+ S  L +H R  HT EKP+KC  C  +  + S ++ H R+HTGE+PY
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRT-HTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 271 QLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQK 309
                        KC  C  + S   HL  H   H ++K
Sbjct: 62  -------------KCPECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 170 YLLARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTS 225
           Y+L  H++ H+ E+PHKC+   C + +  + +L+ H+ +HTG KP+ C++  C   F+ +
Sbjct: 53  YMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNA 112
Query: 226 GELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRS 263
            +  +H    H++EKP+ C +  C     + S +R H+++
Sbjct: 113 SDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 50/128 (39%), Gaps = 39/128 (30%)
Query: 187 CSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI 246
           CS   R FK    L  H+  HTG KPHKC +                             
Sbjct: 42  CSRELRPFKAQYMLVVHMRRHTGEKPHKCTF---------------------------EG 74
Query: 247 CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHM-LIH 305
           C  +   L  ++ H+RSHTGE+PY      HEG        C  A S+      H    H
Sbjct: 75  CRKSYSRLENLKTHLRSHTGEKPYMC---EHEG--------CSKAFSNASDRAKHQNRTH 123
Query: 306 TDQKPYLC 313
           +++KPY+C
Sbjct: 124 SNEKPYVC 131

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 182 ERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
           ERP+ C V  C+R F    SL  HI  HTG KP +C+ C   F+ S  L  H+R  HT E
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGE 60
Query: 240 KPHKCSICDYASVELSKMRNHMRSH 264
           KP  C IC        + + H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 20/103 (19%)
Query: 211 KPHKC--KYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER 268
           +P+ C  + C+ RF+ SG L RH+R  HT +KP +C IC         +  H+R+HTGE+
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 269 PYQLHCKSHEGEKCWKCELC--PYASSSQRHLESHMLIHTDQK 309
           P+              C++C   +A S +R  + H  IH  QK
Sbjct: 62  PFA-------------CDICGRKFARSDER--KRHTKIHLRQK 89

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 182 ERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
           ERP+ C V  C+R F   A L  HI  HTG KP +C+ C   F+ S  L  H+R  HT E
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGE 60
Query: 240 KPHKCSICDYASVELSKMRNHMRSH 264
           KP  C IC        + + H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 20/103 (19%)
Query: 211 KPHKC--KYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER 268
           +P+ C  + C+ RF+ S +L RH+R  HT +KP +C IC         +  H+R+HTGE+
Sbjct: 3   RPYACPVESCDRRFSRSADLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 269 PYQLHCKSHEGEKCWKCELC--PYASSSQRHLESHMLIHTDQK 309
           P+              C++C   +A S +R  + H  IH  QK
Sbjct: 62  PFA-------------CDICGRKFARSDER--KRHTKIHLRQK 89

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 182 ERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
           ERP+ C V  C+R F   A L  HI  HTG KP +C+ C   F+ S  L  H+R  HT E
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGE 60
Query: 240 KPHKCSICDYASVELSKMRNHMRSH 264
           KP  C IC        + + H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 20/103 (19%)
Query: 211 KPHKC--KYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER 268
           +P+ C  + C+ RF+ S EL RH+R  HT +KP +C IC         +  H+R+HTGE+
Sbjct: 3   RPYACPVESCDRRFSRSAELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 269 PYQLHCKSHEGEKCWKCELC--PYASSSQRHLESHMLIHTDQK 309
           P+              C++C   +A S +R  + H  IH  QK
Sbjct: 62  PFA-------------CDICGRKFARSDER--KRHTKIHLRQK 89

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 182 ERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
           ERP+ C V  C+R F   ++L  HI  HTG KP +C+ C   F+ S  L  H+R  HT E
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGE 60
Query: 240 KPHKCSICDYASVELSKMRNHMRSH 264
           KP  C IC        + + H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 20/103 (19%)
Query: 211 KPHKC--KYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER 268
           +P+ C  + C+ RF+ S  L RH+R  HT +KP +C IC         +  H+R+HTGE+
Sbjct: 3   RPYACPVESCDRRFSDSSNLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 269 PYQLHCKSHEGEKCWKCELC--PYASSSQRHLESHMLIHTDQK 309
           P+              C++C   +A S +R  + H  IH  QK
Sbjct: 62  PFA-------------CDICGRKFARSDER--KRHTKIHLRQK 89

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 182 ERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
           ERP+ C V  C+R F     L  HI  HTG KP +C+ C   F+ S  L  H+R  HT E
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGE 60
Query: 240 KPHKCSICDYASVELSKMRNHMRSH 264
           KP  C IC        + + H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 20/103 (19%)
Query: 211 KPHKC--KYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER 268
           +P+ C  + C+ RF+ S EL RH+R  HT +KP +C IC         +  H+R+HTGE+
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 269 PYQLHCKSHEGEKCWKCELC--PYASSSQRHLESHMLIHTDQK 309
           P+              C++C   +A S +R  + H  IH  QK
Sbjct: 62  PFA-------------CDICGRKFARSDER--KRHTKIHLRQK 89

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 182 ERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
           ERP+ C V  C+R F     L  HI  HTG KP +C+ C   F+ S  L  H+R  HT E
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGE 59
Query: 240 KPHKCSICDYASVELSKMRNHMRSH 264
           KP  C IC        + + H + H
Sbjct: 60  KPFACDICGRKFARSDERKRHTKIH 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 20/102 (19%)
Query: 211 KPHKC--KYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER 268
           +P+ C  + C+ RF+ S EL RH+R  HT +KP +C IC         +  H+R+HTGE+
Sbjct: 2   RPYACPVESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 60
Query: 269 PYQLHCKSHEGEKCWKCELC--PYASSSQRHLESHMLIHTDQ 308
           P+              C++C   +A S +R  + H  IH  Q
Sbjct: 61  PFA-------------CDICGRKFARSDER--KRHTKIHLRQ 87

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 181 EERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKH 236
           + R H C    C + +   + L+ H+ THTG KP+KC +  C+ RF  S EL RH R KH
Sbjct: 12  KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR-KH 70
Query: 237 THEKPHKCSICDYASVELSKMRNHMRSH 264
           T  KP +C +C+ +      +  HM+ H
Sbjct: 71  TGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 182 ERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
           ERP+ C V  C+R F     L  HI  HTG KP +C+ C   F+ S  L  H+R  HT E
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGE 60
Query: 240 KPHKCSICDYASVELSKMRNHMRSH 264
           KP  C IC        + + H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 15/83 (18%)
Query: 238 HEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQ 295
           HE+P+ C +  CD       ++  H+R HTG++P+Q             C +C    S  
Sbjct: 1   HERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQ-------------CRICMRNFSRS 47
Query: 296 RHLESHMLIHTDQKPYLCDHCDQ 318
            HL +H+  HT +KP+ CD C +
Sbjct: 48  DHLTTHIRTHTGEKPFACDICGR 70

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 162 CNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESR 221
           C+    ++  L  H++ H+ ++P +C +C R F   ASL  HI THTG KP  C  C  +
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRK 71
Query: 222 FTTSGELVRHVR 233
           F T     RH +
Sbjct: 72  FATLHTRTRHTK 83

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 239 EKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQR 296
           E+P+ C +  CD    + + +  H+R HTG++P+Q             C +C    S Q 
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQ-------------CRICMRNFSQQA 48
Query: 297 HLESHMLIHTDQKPYLCDHC 316
            L +H+  HT +KP+ CD C
Sbjct: 49  SLNAHIRTHTGEKPFACDIC 68

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 174 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHV 232
           RH+  H   RP+ C VC + FK    L  H+  HTG+KP++C  C  RF       RHV
Sbjct: 27  RHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV 85

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 152 VVAPAHMCNY--CNYTSPKRYLLARHLKSHSEERPHKCS--VCERGFKTIASLQNHINTH 207
           VV   ++C++  C     K + L  HL  H+ E+P  C    CE+GF ++  L  H  TH
Sbjct: 8   VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTH 67
Query: 208 TGVKPHKCKY--CESRFTTSGELVRHV-RYKHTHEKPHKCSI--CDYASVELSKMRNHMR 262
           TG K   C    C+ RFTT   + +H  R+ +     + C    C  A  + ++++ H  
Sbjct: 68  TGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF 127
Query: 263 SHTGERPYQLHCKSHEG 279
           SHT + PY+     HEG
Sbjct: 128 SHTQQLPYEC---PHEG 141

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 180 SEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYK 235
           S    H C    C + +   + L+ H+ THTG KP+ C +  C  +F  S EL RH R K
Sbjct: 2   SRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-K 60
Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSH 264
           HT  +P +C  CD A      +  HM+ H
Sbjct: 61  HTGHRPFQCQKCDRAFSRSDHLALHMKRH 89

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 190 CERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCSIC 247
           C + +   + L+ H+ THTG KP+ C +  C  +F  S EL RH R KHT  +P +C  C
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTGHRPFQCQKC 71
Query: 248 DYASVELSKMRNHMRSH 264
           D A      +  HM+ H
Sbjct: 72  DRAFSRSDHLALHMKRH 88

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 158 MCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY 217
           +C +C     K Y L  H ++H++ERP+ C +C + F+    L++H   H+  KP KC+ 
Sbjct: 19  ICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQE 78
Query: 218 CESRFTTSGELVRH 231
           C   F  S  L  H
Sbjct: 79  CGKGFCQSRTLAVH 92

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 14/91 (15%)
Query: 215 CKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHC 274
           CK+C   FT S  L+ H R  HT E+P+ C IC  A      +R+H   H+ E+P+    
Sbjct: 20  CKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF---- 74
Query: 275 KSHEGEKCWKCELCPYASSSQRHLESHMLIH 305
                    KC+ C       R L  H  +H
Sbjct: 75  ---------KCQECGKGFCQSRTLAVHKTLH 96

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 212 PHKCKYCESRFTTSGELVRHVRYKHTHE-KPHKCSICDYASVELSKMRNHMRSHTGERPY 270
           PHK   C   F  +  + +H+   HTH  + H C+ C  A VE SK++ H   HTGE+P+
Sbjct: 9   PHK--GCTKMFRDNSAMRKHL---HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPF 63
Query: 271 QLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC--DHCDQ 318
           Q    + EG        C    S   +L +H+ IHT  +PY+C  D C++
Sbjct: 64  QC---TFEG--------CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK 102

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 162 CNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESR 221
           C+    ++  L  H++ H+ ++P +C +C R F     L  HI THTG KP  C  C  +
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRK 71
Query: 222 FTTSGELVRHVRYKHT 237
           F T      H R +HT
Sbjct: 72  FAT-----LHTRDRHT 82

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 16/101 (15%)
Query: 211 KPHKC--KYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER 268
           +P+ C  + C+ RF+    L  H+R  HT +KP +C IC     + + +  H+R+HTGE+
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRI-HTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 269 PYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQK 309
           P+              C++C    ++    + H  IH  QK
Sbjct: 62  PF-------------ACDICGRKFATLHTRDRHTKIHLRQK 89

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERP 269
           KP+KC  C++ F   G L  H +  HT EKP++C+IC       + ++ H R H+GE+P
Sbjct: 16  KPYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 187 CSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI 246
           C VC+R +  + SL+ H N H+  K + C+YCE  F  +    +H    HT E+ ++C  
Sbjct: 25  CIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKH-EIHHTGERRYQCLA 83
Query: 247 CDYASVELSKMRNHMRSHTGERP------YQLH-CKS 276
           C  + +    M +H++S   + P      Y+LH C+S
Sbjct: 84  CGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRS 120

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 15/81 (18%)
Query: 155 PAHMCNYCNYTSPKRYLLARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKP 212
           P  M N  NY  PK              RP+ C V  C+R F     L  HI  HTG KP
Sbjct: 3   PHPMNNLLNYVVPK-------------MRPYACPVESCDRRFSRSDELTRHIRIHTGQKP 49
Query: 213 HKCKYCESRFTTSGELVRHVR 233
            +C+ C   F+ S  L  H+R
Sbjct: 50  FQCRICMRNFSRSDHLTTHIR 70

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 210 VKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHT 265
           ++P+ C    C+ RF+ S EL RH+R  HT +KP +C IC         +  H+R+HT
Sbjct: 17  MRPYACPVESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 157 HMCNY--CNYTSPKRYLLARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKP 212
           ++C++  C     K + L  HL  H+ E+P  C    CE+GF ++  L  H  THTG K 
Sbjct: 4   YICSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN 63
Query: 213 HKCKY--CESRFTTSGELVRHVRYKH 236
             C    C+ RFTT   + +H    H
Sbjct: 64  FTCDSDGCDLRFTTKANMKKHFNRFH 89

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 27/54 (50%)
Query: 183 RPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKH 236
           +P +C +C R F     L  HI THTG KP  C  C  +F  S E  RH   +H
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH 55

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 192 RGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCSI--C 247
           + FK    L NHI  HTG KP  C +  C   F  S  L  H R  HT EKP KC    C
Sbjct: 70  KSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKR-THTGEKPFKCEFEGC 128
Query: 248 DYASVELSKMRNHMRSHTGER 268
           D      S  + HM  HT ++
Sbjct: 129 DRRFANSSDRKKHMHVHTSDK 149

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 31/123 (25%)
Query: 216 KYCESRFTTSGELVRHVRYKHTHEKPHKCSICDY--------ASVELSKMRNHMRSHTGE 267
           K C+  F+T  ELV HV  +H         +C +        +     K+ NH+R HTGE
Sbjct: 29  KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE 88
Query: 268 RPY-----------------QLHCKSHEGEKCWKCEL--CP--YASSSQRHLESHMLIHT 306
           +P+                 ++H ++H GEK +KCE   C   +A+SS R  + HM +HT
Sbjct: 89  KPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDR--KKHMHVHT 146
Query: 307 DQK 309
             K
Sbjct: 147 SDK 149

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 187 CSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH--VRYKHTHEKPHKC 244
           C  C + F +   L+ H   HTG KP +C  C   +     L+ H      +  E+   C
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69
Query: 245 SICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHML 303
           S+C        ++R HM SHTGE PY             KC  C      ++ L+SHM+
Sbjct: 70  SVCQETFRRRMELRLHMVSHTGEMPY-------------KCSSCSQQFMQKKDLQSHMI 115

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 159 CNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGV--KPHKCK 216
           C  C       Y L RH  SHS E+P+ C VC   FK    +  H+ +H G   KP+ C+
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 217 YCESRFTTSGELVRHVRYKHT 237
            C   F+    L  H++  H+
Sbjct: 70  SCGKGFSRPDHLNGHIKQVHS 90

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 209 GVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSH 264
           G    +C YC   F ++  L  H+R  HT EKP+KC  C+YA+ + + +R H+  H
Sbjct: 1   GSSSRECSYCGKFFRSNYYLNIHLR-THTGEKPYKCEFCEYAAAQKTSLRYHLERH 55

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERP 269
           + +KC  C   F+ S +L +H R  HT EKP+KC  C  A ++ S +  H R HTG  P
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|1BBO|A Chain A, High-Resolution Solution Structure Of The Double Cys2His2 Zinc Finger From The Human Enhancer Binding Protein Mbp-1 Length = 57

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 187 CSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYK 235
           C  C    K  + L+ HI THT V+P+ C YC   F T G L +H++ K
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	330
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-33
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-28
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-26
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-30
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-22
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-16
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	9e-28
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-25
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-22
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-27
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-26
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-18
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-17
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-26
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-23
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-09
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-26
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-20
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-26
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-21
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-26
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-22
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-20
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-16
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-14
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-21
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-15
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-20
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-20
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-15
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-20
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-14
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-20
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-16
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-14
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-19
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-18
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-17
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-18
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-16
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-15
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-18
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-15
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-13
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-17
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	6e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-17
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	6e-14
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-16
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-16
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-14
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-14
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-16
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-15
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-14
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	7e-16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-16
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-15
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-15
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-12
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-15
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-14
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-14
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-13
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-13
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-11
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-13
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	7e-05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	9e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-13
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-13
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-12
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	8e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-13
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	8e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-12
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	7e-08
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-11
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-09
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	8e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-10
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	8e-06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-09
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-09
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-07
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-09
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-09
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	8e-09
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	5e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	9e-08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	9e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	5e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-07
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	4e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-07
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-08
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	5e-08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	7e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-08
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	9e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	9e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	8e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	6e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	2e-05
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	2e-05
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	6e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	5e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	5e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	3e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	6e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	5e-05
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	1e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	1e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	6e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  121 bits (307), Expect = 1e-33
 Identities = 56/160 (35%), Positives = 78/160 (48%), Gaps = 16/160 (10%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 231
                     E+P+ C  C + F     L  H  THTG KP+KC  C   F+   +L RH
Sbjct: 9   SVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH 68

Query: 232 VRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY---------------QLHCKS 276
            R  HT EKP+KC  C  +  + + +R H R+HTGE+PY               + H ++
Sbjct: 69  QR-THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT 127

Query: 277 HEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC 316
           H GEK +KC  C  + S + +L +H   HT +KPY C  C
Sbjct: 128 HTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPEC 167

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  107 bits (271), Expect = 2e-28
 Identities = 52/152 (34%), Positives = 72/152 (47%), Gaps = 14/152 (9%)

Query: 159 CNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC 218
           C  C  +   +  L RH ++H+ E+P+KC  C + F   A+L+ H  THTG KP+ C  C
Sbjct: 52  CPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPEC 111

Query: 219 ESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHE 278
              F+    L  H R  HT EKP+KC  C  +      +  H R+HTGE+PY        
Sbjct: 112 GKSFSQLAHLRAHQR-THTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPY-------- 162

Query: 279 GEKCWKCELCPYASSSQRHLESHMLIHTDQKP 310
                KC  C  + S +  L  H   HT +K 
Sbjct: 163 -----KCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  100 bits (252), Expect = 9e-26
 Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 16/133 (12%)

Query: 199 SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMR 258
           S         G KP+ C  C   F+ S  L  H R  HT EKP+KC  C  +  +   + 
Sbjct: 8   SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRT-HTGEKPYKCPECGKSFSDKKDLT 66

Query: 259 NHMRSHTGERPYQ---------------LHCKSHEGEKCWKCELCPYASSSQRHLESHML 303
            H R+HTGE+PY+                H ++H GEK + C  C  + S   HL +H  
Sbjct: 67  RHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR 126

Query: 304 IHTDQKPYLCDHC 316
            HT +KPY C  C
Sbjct: 127 THTGEKPYKCPEC 139

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 54.0 bits (131), Expect = 6e-09
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 15/77 (19%)

Query: 255 SKMRNHMRSHTGERPY---------------QLHCKSHEGEKCWKCELCPYASSSQRHLE 299
           S          GE+PY                 H ++H GEK +KC  C  + S ++ L 
Sbjct: 7   SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLT 66

Query: 300 SHMLIHTDQKPYLCDHC 316
            H   HT +KPY C  C
Sbjct: 67  RHQRTHTGEKPYKCPEC 83

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  110 bits (278), Expect = 5e-30
 Identities = 39/152 (25%), Positives = 57/152 (37%), Gaps = 23/152 (15%)

Query: 174 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHK---------CKYCESRFTT 224
                   +       C+R F T+  L  H+       P +         C      F  
Sbjct: 15  SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA 74

Query: 225 SGELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKC 282
             +LV H+R  HT EKP  C    C         ++ H R+HTGE+P++  C   E E C
Sbjct: 75  KYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK--C---EFEGC 128

Query: 283 WKCELCPYASSSQRHLESHMLIHTDQKPYLCD 314
            +     +A+SS    + HM +HT  K     
Sbjct: 129 DRR----FANSS--DRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 91.6 bits (228), Expect = 1e-22
 Identities = 38/126 (30%), Positives = 47/126 (37%), Gaps = 14/126 (11%)

Query: 159 CNYCNYTSPKRYLLARHLKSHSEERPHK---------CSVCERGFKTIASLQNHINTHTG 209
              C+ T    + L  H+       P +         C    + FK    L NHI  HTG
Sbjct: 28  KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87

Query: 210 VKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHT 265
            KP  C +  C   F  S  L  H R  HT EKP KC    CD      S  + HM  HT
Sbjct: 88  EKPFPCPFPGCGKIFARSENLKIHKR-THTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146

Query: 266 GERPYQ 271
            ++   
Sbjct: 147 SDKSGP 152

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 73.9 bits (182), Expect = 3e-16
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 10/110 (9%)

Query: 140 EKPKLSKLNKKQVVAPAHMCNYCNYTSPKRYLLARHLKSHSEERPHKCSV--CERGFKTI 197
             P+     +   V     C     +   +Y L  H++ H+ E+P  C    C + F   
Sbjct: 51  GGPE-----QNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARS 105

Query: 198 ASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCS 245
            +L+ H  THTG KP KC++  C+ RF  S +  +H+   HT +K    S
Sbjct: 106 ENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH-VHTSDKSGPSS 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  104 bits (263), Expect = 9e-28
 Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 23/145 (15%)

Query: 182 ERPHKCSVCERGFKTIASLQNHINT---HTGVKPHKCKYCESR-----FTTSGELVRHVR 233
           E   +   C + F +   L +HIN+   H   K   C +         F     LV H+R
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 234 YKHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYA 291
            +HT EKPHKC+   C  +   L  ++ H+RSHTGE+PY   C   E E C K     ++
Sbjct: 61  -RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYM--C---EHEGCSKA----FS 110

Query: 292 SSSQRHLESHML-IHTDQKPYLCDH 315
           ++S      H    H+++KPY+C  
Sbjct: 111 NAS--DRAKHQNRTHSNEKPYVCKL 133

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 98.4 bits (246), Expect = 2e-25
 Identities = 47/161 (29%), Positives = 62/161 (38%), Gaps = 25/161 (15%)

Query: 159 CNYCNYTSPKRYLLARHLKS---HSEERPHKCSVCE-----RGFKTIASLQNHINTHTGV 210
            + C+     +  L  H+ S   H E +   C         R FK    L  H+  HTG 
Sbjct: 6   WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 65

Query: 211 KPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKC--SICDYASVELSKMRNHM-RSHT 265
           KPHKC +  C   ++    L  H+R  HT EKP+ C    C  A    S    H  R+H+
Sbjct: 66  KPHKCTFEGCRKSYSRLENLKTHLRS-HTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124

Query: 266 GERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHT 306
            E+PY   CK      C K     Y   S   L  H+    
Sbjct: 125 NEKPYV--CKLPG---CTKR----YTDPS--SLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 91.1 bits (227), Expect = 1e-22
 Identities = 33/121 (27%), Positives = 66/121 (54%), Gaps = 11/121 (9%)

Query: 157 HMCNYCNYTSPKR-----YLLARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTG 209
            +C++   +   R     Y+L  H++ H+ E+PHKC+   C + +  + +L+ H+ +HTG
Sbjct: 35  FVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG 94

Query: 210 VKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHT 265
            KP+ C++  C   F+ + +  +H    H++EKP+ C +  C     + S +R H+++  
Sbjct: 95  EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

Query: 266 G 266
           G
Sbjct: 155 G 155

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  102 bits (257), Expect = 1e-27
 Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 178 SHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHT 237
           S     PHKC VC + F     L+ H+  HTGVKP+KCK C+     S  L +H+R  H+
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHS 60

Query: 238 HEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            E+P KC IC YAS   S++  H+RSHTG+    
Sbjct: 61  DERPFKCQICPYASRNSSQLTVHLRSHTGDSGPS 94

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 99.0 bits (248), Expect = 3e-26
 Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 14/108 (12%)

Query: 206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHT 265
           +     PHKC+ C   F+   +L  H+R  HT  KP+KC  CDYA+ + S +  H+R H+
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRC-HTGVKPYKCKTCDYAAADSSSLNKHLRIHS 60

Query: 266 GERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
            ERP+             KC++CPYAS +   L  H+  HT       
Sbjct: 61  DERPF-------------KCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 77.8 bits (193), Expect = 2e-18
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)

Query: 157 HMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK 216
           H C  C     ++  L  H++ H+  +P+KC  C+      +SL  H+  H+  +P KC+
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 217 YCESRFTTSGELVRHVRYKHTHEKPHKC 244
            C      S +L  H+R  HT +     
Sbjct: 69  ICPYASRNSSQLTVHLR-SHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 74.8 bits (185), Expect = 4e-17
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 13/82 (15%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQ 295
                PHKC +C        K++ HMR HTG +PY             KC+ C YA++  
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPY-------------KCKTCDYAAADS 49

Query: 296 RHLESHMLIHTDQKPYLCDHCD 317
             L  H+ IH+D++P+ C  C 
Sbjct: 50  SSLNKHLRIHSDERPFKCQICP 71

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 47.0 bits (113), Expect = 3e-07
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 13/55 (23%)

Query: 263 SHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCD 317
           S     P+             KCE+C    S +  L++HM  HT  KPY C  CD
Sbjct: 2   SSGSSGPH-------------KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCD 43

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  101 bits (253), Expect = 1e-26
 Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 17/135 (12%)

Query: 181 EERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTH 238
           E R   C    C + F+  ++++ H++TH G + H C  C   F  S +L RH    HT 
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLV-HTG 59

Query: 239 EKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQR 296
           EKP +C+   C         +R H+R HTG+RPY   C       C K     +A S+  
Sbjct: 60  EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYV--CPFDG---CNKK----FAQST-- 108

Query: 297 HLESHMLIHTDQKPY 311
           +L+SH+L H   K  
Sbjct: 109 NLKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 91.8 bits (229), Expect = 3e-23
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 6/104 (5%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELV 229
           + +HL +H   R H C+ C + F   + L+ H   HTG KP +C +  C  RF+    L 
Sbjct: 23  MRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR 81

Query: 230 RHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQ 271
            HVR  HT ++P+ C    C+    + + +++H+ +H   +  Q
Sbjct: 82  THVR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 53.7 bits (130), Expect = 2e-09
 Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 16/79 (20%)

Query: 239 EKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQR 296
            +   C    C     + S MR H+ +H G R +              C  C  A     
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVH-------------VCAECGKAFVESS 48

Query: 297 HLESHMLIHTDQKPYLCDH 315
            L+ H L+HT +KP+ C  
Sbjct: 49  KLKRHQLVHTGEKPFQCTF 67

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  103 bits (258), Expect = 1e-26
 Identities = 42/171 (24%), Positives = 57/171 (33%), Gaps = 28/171 (16%)

Query: 175 HLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVR 230
                   + + CS   C   +     LQ H+  HTG KP  CK   CE  FT+   L R
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 231 HVRYKHTHEKPHKCS--ICDYASVELSKMRNHMRSHTGER--PY---------------- 270
           H    HT EK   C    CD      + M+ H       +   Y                
Sbjct: 63  HSLT-HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121

Query: 271 -QLHCKSHEGEKCWKC--ELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQ 318
            ++H  SH  +  ++C  E C    S    L+ H  +H        D C  
Sbjct: 122 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSF 172

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 86.1 bits (214), Expect = 2e-20
 Identities = 33/141 (23%), Positives = 47/141 (33%), Gaps = 26/141 (18%)

Query: 202 NHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCS--ICDYASVELSKM 257
                    K + C +  C + +  + +L  H+  KHT EKP  C    C+     L  +
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLC-KHTGEKPFPCKEEGCEKGFTSLHHL 60

Query: 258 RNHMRSHTGERPY-----------------QLHCKSHEGEKCW--KCEL--CPYASSSQR 296
             H  +HTGE+ +                 + H       K     C    C  A     
Sbjct: 61  TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHN 120

Query: 297 HLESHMLIHTDQKPYLCDHCD 317
            L+ H   HT Q PY C H  
Sbjct: 121 QLKVHQFSHTQQLPYECPHEG 141

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 51.8 bits (125), Expect = 3e-08
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 172 LARHLKSHSEERPHKCS--VCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 229
           L  H  SH+++ P++C    C++ F   + L+ H   H G    K   C     T    +
Sbjct: 122 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYL 181

Query: 230 RHVRYKHT 237
           +HV   H 
Sbjct: 182 KHVAECHQ 189

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  100 bits (252), Expect = 1e-26
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 16/128 (12%)

Query: 182 ERPHKCS--VCERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKHT 237
           +RP  C+   C + +  ++ LQ H   HTG KP++C +  CE RF+ S +L RH R +HT
Sbjct: 4   KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-RHT 62

Query: 238 HEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRH 297
             KP +C  C         ++ H R+HTGE+P+   C+      C K     +A S    
Sbjct: 63  GVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFS--CRWPS---CQKK----FARSD--E 111

Query: 298 LESHMLIH 305
           L  H  +H
Sbjct: 112 LVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 85.6 bits (213), Expect = 5e-21
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 18/114 (15%)

Query: 208 TGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRS 263
           +  +P  C Y  C  R+     L  H R KHT EKP++C    C+       +++ H R 
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRR 60

Query: 264 HTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCD 317
           HTG +P+             +C+ C    S   HL++H   HT +KP+ C    
Sbjct: 61  HTGVKPF-------------QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPS 101

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 83.0 bits (206), Expect = 6e-20
 Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 5/97 (5%)

Query: 172 LARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 229
           L  H + H+ E+P++C    CER F     L+ H   HTGVKP +CK C+ +F+ S  L 
Sbjct: 24  LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLK 83

Query: 230 RHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSH 264
            H R  HT EKP  C    C        ++  H   H
Sbjct: 84  THTR-THTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 99.5 bits (249), Expect = 4e-26
 Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 16/134 (11%)

Query: 179 HSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTH 238
            S     +C  C + F +   L+ H   HTG KP +C  C   +     L+ H      +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61

Query: 239 --EKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQR 296
             E+   CS+C        ++R HM SHTGE PY             KC  C      ++
Sbjct: 62  RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPY-------------KCSSCSQQFMQKK 108

Query: 297 HLESHML-IHTDQK 309
            L+SHM+ +H+   
Sbjct: 109 DLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 89.1 bits (222), Expect = 3e-22
 Identities = 29/115 (25%), Positives = 42/115 (36%), Gaps = 17/115 (14%)

Query: 207 HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRS--- 263
            +G    +C  C  +F +   L  H R KHT EKP +C  C         +  H      
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60

Query: 264 HTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQ 318
           +  E+ +              C +C      +  L  HM+ HT + PY C  C Q
Sbjct: 61  NRSEQVF-------------TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQ 102

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 85.2 bits (212), Expect = 1e-20
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 5/114 (4%)

Query: 159 CNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNH---INTHTGVKPHKC 215
           C  C+     +Y L  H + H+ E+P +C  C + +    +L  H      +   +   C
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69

Query: 216 KYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHM-RSHTGER 268
             C+  F    EL  H+   HT E P+KCS C    ++   +++HM + H+G  
Sbjct: 70  SVCQETFRRRMELRLHMV-SHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 89.8 bits (224), Expect = 1e-22
 Identities = 24/100 (24%), Positives = 33/100 (33%), Gaps = 1/100 (1%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 231
            +        ++   C  C R F    +L  H  THT  +P+ C  C   F     L  H
Sbjct: 5   SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64

Query: 232 VRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
               H+ EKP KC  C     +   +  H   H       
Sbjct: 65  RYI-HSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT 103

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 89.8 bits (224), Expect = 1e-22
 Identities = 30/115 (26%), Positives = 41/115 (35%), Gaps = 14/115 (12%)

Query: 199 SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMR 258
                       K   CK+C   FT S  L+ H R  HT E+P+ C IC  A      +R
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERT-HTDERPYTCDICHKAFRRQDHLR 62

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +H   H+ E+P+             KC+ C       R L  H  +H        
Sbjct: 63  DHRYIHSKEKPF-------------KCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 72.5 bits (179), Expect = 3e-16
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 159 CNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC 218
           C +C     K Y L  H ++H++ERP+ C +C + F+    L++H   H+  KP KC+ C
Sbjct: 20  CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQEC 79

Query: 219 ESRFTTSGELVRHVRYKHTHEKPHKCS 245
              F  S  L  H    H        +
Sbjct: 80  GKGFCQSRTLAVHKTL-HMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 67.8 bits (167), Expect = 1e-14
 Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 14/92 (15%)

Query: 225 SGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWK 284
           S             +K   C  C     +   +  H R+HT ERPY              
Sbjct: 2   SSGSSGGRLP-SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPY-------------T 47

Query: 285 CELCPYASSSQRHLESHMLIHTDQKPYLCDHC 316
           C++C  A   Q HL  H  IH+ +KP+ C  C
Sbjct: 48  CDICHKAFRRQDHLRDHRYIHSKEKPFKCQEC 79

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 86.0 bits (214), Expect = 2e-21
 Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 3/89 (3%)

Query: 182 ERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
           ERP+ C V  C+R F    SL  HI  HTG KP +C+ C   F+ S  L  H+R  HT E
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGE 60

Query: 240 KPHKCSICDYASVELSKMRNHMRSHTGER 268
           KP  C IC        + + H + H  ++
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 77.1 bits (191), Expect = 4e-18
 Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 16/101 (15%)

Query: 211 KPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER 268
           +P+ C    C+ RF+ SG L RH+R  HT +KP +C IC         +  H+R+HTGE+
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 269 PYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQK 309
           P+              C++C    +     + H  IH  QK
Sbjct: 62  PF-------------ACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 68.6 bits (169), Expect = 4e-15
 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 231
           L RH++ H+ ++P +C +C R F     L  HI THTG KP  C  C  +F  S E  RH
Sbjct: 22  LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

Query: 232 VRYKHTHEK 240
            +  H  +K
Sbjct: 82  TK-IHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 66.0 bits (162), Expect = 4e-14
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 15/80 (18%)

Query: 239 EKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQR 296
           E+P+ C +  CD    +   +  H+R HTG++P+             +C +C    S   
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPF-------------QCRICMRNFSRSD 48

Query: 297 HLESHMLIHTDQKPYLCDHC 316
           HL +H+  HT +KP+ CD C
Sbjct: 49  HLTTHIRTHTGEKPFACDIC 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 83.7 bits (208), Expect = 1e-20
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 199 SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE--KPHKCSICDYASVELSK 256
           S  +   TH+G KP++C  C +RFT SG +  H+  +   E      C  CD      S 
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSD 60

Query: 257 MRNHMRS-HTGERPY 270
           +  H+R  H+   P 
Sbjct: 61  LGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 81.8 bits (203), Expect = 5e-20
 Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTG--VKPHKCKYCESRFTTSGELV 229
                ++HS E+P++C +C   F    +++ HI       V    C +C++      +L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 230 RHVRYKHTHEKPH 242
            H+R +H++  P 
Sbjct: 63  VHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 67.9 bits (167), Expect = 5e-15
 Identities = 18/89 (20%), Positives = 29/89 (32%), Gaps = 17/89 (19%)

Query: 226 GELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGE--RPYQLHCKSHEGEKCW 283
           G      R  H+ EKP++C IC     +   M+ H+     E    +             
Sbjct: 1   GSSGSSGR-THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKF------------- 46

Query: 284 KCELCPYASSSQRHLESHM-LIHTDQKPY 311
            C  C    + +  L  H+   H+   P 
Sbjct: 47  HCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 15/64 (23%)

Query: 256 KMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHT--DQKPYLC 313
              +  R+H+GE+PY             +C +C    +    ++ H+L     +   + C
Sbjct: 2   SSGSSGRTHSGEKPY-------------ECYICHARFTQSGTMKMHILQKHTENVAKFHC 48

Query: 314 DHCD 317
            HCD
Sbjct: 49  PHCD 52

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 7/22 (31%), Positives = 9/22 (40%)

Query: 297 HLESHMLIHTDQKPYLCDHCDQ 318
              S    H+ +KPY C  C  
Sbjct: 2   SSGSSGRTHSGEKPYECYICHA 23

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 84.2 bits (209), Expect = 1e-20
 Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 5/91 (5%)

Query: 179 HSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRY 234
             + R H C    C + +   + L+ H+ THTG KP+KC +  C+ RF  S EL RH R 
Sbjct: 10  LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR- 68

Query: 235 KHTHEKPHKCSICDYASVELSKMRNHMRSHT 265
           KHT  KP +C +C+ +      +  HM+ H 
Sbjct: 69  KHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 67.7 bits (166), Expect = 2e-14
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 5/85 (5%)

Query: 157 HMCN--YCNYTSPKRYLLARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKP 212
           H C+   C     K   L  HL++H+ E+P+KC+   C+  F     L  H   HTG KP
Sbjct: 16  HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP 75

Query: 213 HKCKYCESRFTTSGELVRHVRYKHT 237
            +C  C   F+ S  L  H++ +H 
Sbjct: 76  FQCGVCNRSFSRSDHLALHMK-RHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 60.7 bits (148), Expect = 4e-12
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 13/84 (15%)

Query: 236 HTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASS 293
               + H C    C     + S ++ H+R+HTGE+PY+  C     E C       +A S
Sbjct: 10  LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYK--C---TWEGCDWR----FARS 60

Query: 294 SQRHLESHMLIHTDQKPYLCDHCD 317
               L  H   HT  KP+ C  C+
Sbjct: 61  D--ELTRHYRKHTGAKPFQCGVCN 82

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 82.2 bits (204), Expect = 4e-20
 Identities = 26/89 (29%), Positives = 34/89 (38%), Gaps = 5/89 (5%)

Query: 183 RPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPH 242
           +P +C +C R F     L  HI THTG KP  C  C  +F  S E  RH         P 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD-IQH-ILPI 59

Query: 243 KCSICDYA---SVELSKMRNHMRSHTGER 268
                +     +  L      ++   GER
Sbjct: 60  LEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 72.5 bits (179), Expect = 1e-16
 Identities = 23/103 (22%), Positives = 35/103 (33%), Gaps = 18/103 (17%)

Query: 210 VKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERP 269
           +KP +C+ C   F+ S  L  H+R  HT EKP  C IC        + + H        P
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQH-ILP 58

Query: 270 YQLHCKSHEGEKCWKCELCPYASSSQRHLESHML---IHTDQK 309
                           +      S   HLE+ +        ++
Sbjct: 59  I-------------LEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 65.2 bits (160), Expect = 6e-14
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 14/78 (17%)

Query: 240 KPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLE 299
           KP +C IC         +  H+R+HTGE+P+              C++C    +     +
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPF-------------ACDICGRKFARSDERK 48

Query: 300 SHMLIHTDQKPYLCDHCD 317
            H  I     P L D  +
Sbjct: 49  RHRDIQH-ILPILEDKVE 65

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 7/43 (16%), Positives = 10/43 (23%), Gaps = 4/43 (9%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHIN---THTGVK 211
             RH        P      E        L+N +       G +
Sbjct: 47  RKRHRDIQHI-LPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 80.2 bits (199), Expect = 5e-19
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 17/111 (15%)

Query: 206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHT 265
             +G K + C+ C   FT   +  RH+   H   +P+ C +C         +  HM+ HT
Sbjct: 4   GSSGDKLYPCQ-CGKSFTHKSQRDRHMSM-HLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61

Query: 266 GERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC 316
           G +PY             +C +C      +     H  + +  K Y     
Sbjct: 62  GIKPY-------------ECNICAKRFMWRDSF--HRHVTSCTKSYEAAKA 97

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 79.0 bits (196), Expect = 1e-18
 Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 6/99 (6%)

Query: 177 KSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKH 236
              S ++ + C  C + F   +    H++ H G++P+ C  C  +F     LV H++  H
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI-H 60

Query: 237 THEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCK 275
           T  KP++C+IC    +       H    +  + Y+    
Sbjct: 61  TGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYE--AA 95

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 74.8 bits (185), Expect = 5e-17
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 231
             RH+  H   RP+ C VC + FK    L  H+  HTG+KP++C  C  RF       RH
Sbjct: 25  RDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRH 84

Query: 232 VRYKHTHEKPHKCSIC 247
           V    +  K ++ +  
Sbjct: 85  V---TSCTKSYEAAKA 97

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 52.4 bits (127), Expect = 4e-09
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 159 CNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC 218
           C  C      ++ L  H+K H+  +P++C++C + F    S   H+   +  K ++    
Sbjct: 40  CGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV--TSCTKSYEAAKA 97

Query: 219 ESRFTTSGEL 228
           E   T +   
Sbjct: 98  EQNTTEASGP 107

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 77.9 bits (193), Expect = 1e-18
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHT 265
           + +   P KC  C    ++   L  H R  H  ++P KC+ C + + + S +  HM+   
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

Query: 266 GERPYQ 271
           G+    
Sbjct: 62  GDMSGP 67

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 72.1 bits (178), Expect = 1e-16
 Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 13/77 (16%)

Query: 235 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSS 294
             +   P KCS C Y+    + +R H R H  +RP+             KC  C + +  
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPF-------------KCNYCSFDTKQ 49

Query: 295 QRHLESHMLIHTDQKPY 311
             +L  HM         
Sbjct: 50  PSNLSKHMKKFHGDMSG 66

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 69.4 bits (171), Expect = 2e-15
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 178 SHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHT 237
           S S   P KCS C     + A+L+ H   H   +P KC YC         L +H++ K  
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK-KFH 61

Query: 238 HEKPHKCS 245
            +     S
Sbjct: 62  GDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 13/56 (23%)

Query: 262 RSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCD 317
            S +   P              KC  C Y+ SS+  L  H  IH   +P+ C++C 
Sbjct: 2   SSGSSGHPE-------------KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCS 44

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 51.0 bits (123), Expect = 7e-09
 Identities = 15/59 (25%), Positives = 25/59 (42%)

Query: 157 HMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
             C+ C+Y+   +  L  H + H  +RP KC+ C    K  ++L  H+    G      
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 77.6 bits (192), Expect = 2e-18
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)

Query: 179 HSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKH 236
            +       + C + +   + L+ H+ THTG KP+ C +  C  +F  S EL RH R KH
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KH 60

Query: 237 THEKPHKCSICDYASVELSKMRNHMRSH 264
           T  +P +C  CD A      +  HM+ H
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 69.5 bits (171), Expect = 2e-15
 Identities = 30/101 (29%), Positives = 39/101 (38%), Gaps = 16/101 (15%)

Query: 207 HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSH 264
            T         C   +T S  L  H+R  HT EKP+ C    C +      ++  H R H
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 265 TGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIH 305
           TG RP+             +C+ C  A S   HL  HM  H
Sbjct: 61  TGHRPF-------------QCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 64.1 bits (157), Expect = 2e-13
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 159 CNYCNYTSPKRYLLARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCK 216
              C  T  K   L  HL++H+ E+P+ C    C   F     L  H   HTG +P +C+
Sbjct: 10  YAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQ 69

Query: 217 YCESRFTTSGELVRHVRYKHTH 238
            C+  F+ S  L  H++    H
Sbjct: 70  KCDRAFSRSDHLALHMK---RH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 64.1 bits (157), Expect = 2e-13
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 11/83 (13%)

Query: 235 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSS 294
           K T       + C     + S ++ H+R+HTGE+PY  HC       C       +A S 
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPY--HCDWDG---CGWK----FARSD 51

Query: 295 QRHLESHMLIHTDQKPYLCDHCD 317
              L  H   HT  +P+ C  CD
Sbjct: 52  --ELTRHYRKHTGHRPFQCQKCD 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 75.2 bits (186), Expect = 1e-17
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 199 SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMR 258
              +H +     KP+KC  C++ F   G L  H    HT EKP++C+IC       + ++
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTV-HTGEKPYRCNICGAQFNRPANLK 62

Query: 259 NHMRSHTGERPY 270
            H R H+GE+PY
Sbjct: 63  THTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 66.7 bits (164), Expect = 1e-14
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 231
              H      ++P+KC  C+  F+   +L +H   HTG KP++C  C ++F     L  H
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

Query: 232 VRYKHTHEKPH 242
            R  H+ EKP+
Sbjct: 65  TR-IHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 63.6 bits (156), Expect = 2e-13
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 225 SGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWK 284
                 H       +KP+KC  C  +      + +H   HTGE+PY             +
Sbjct: 2   GHHHHHHSHM-THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPY-------------R 47

Query: 285 CELCPYASSSQRHLESHMLIHTDQKPY 311
           C +C    +   +L++H  IH+ +KPY
Sbjct: 48  CNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 50.9 bits (123), Expect = 6e-09
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 13/62 (20%)

Query: 255 SKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD 314
               +H      ++PY             KC+ C  +   + +L SH  +HT +KPY C+
Sbjct: 3   HHHHHHSHMTHSDKPY-------------KCDRCQASFRYKGNLASHKTVHTGEKPYRCN 49

Query: 315 HC 316
            C
Sbjct: 50  IC 51

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 74.1 bits (183), Expect = 3e-17
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 207 HTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCS--ICDYASVELSKMRNHMR 262
            +G     C +  C   F+    L  H +Y+H H+K   C    C  +      ++ HM+
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 263 SHTGERPYQ 271
            H+  R Y 
Sbjct: 62  LHSDTRDYI 70

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 65.3 bits (160), Expect = 6e-14
 Identities = 16/74 (21%), Positives = 22/74 (29%), Gaps = 6/74 (8%)

Query: 179 HSEERPHKCSV--CERGFKTIASLQNHI-NTHTGVKPHKCKY--CESRFTTSGELVRHVR 233
            S      C    C R F     L +H    H   K   C    C   F     L  H++
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 234 YKHTHEKPHKCSIC 247
             H+  + + C   
Sbjct: 62  -LHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 49.5 bits (119), Expect = 3e-08
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 3/50 (6%)

Query: 172 LARHLK-SHSEERPHKCS--VCERGFKTIASLQNHINTHTGVKPHKCKYC 218
           L  H K  H  ++   C    C + F     L+ H+  H+  + + C++ 
Sbjct: 25  LNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 9/55 (16%), Positives = 16/55 (29%), Gaps = 12/55 (21%)

Query: 264 HTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLI-HTDQKPYLCDHCD 317
            +G       C       C +     +++    +L  H    H  QK + C    
Sbjct: 2   SSGSSGMP--CDFPG---CGRI----FSNRQ--YLNHHKKYQHIHQKSFSCPEPA 45

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 72.9 bits (180), Expect = 1e-16
 Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 17/106 (16%)

Query: 207 HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTG 266
            +G     C+ C   F     L RH    H+ EKP+ C +C        +M  H+RSH G
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLS-HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60

Query: 267 E--RPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHM-LIHTDQK 309
              +PY              C+ C    S   HL  H+  +H+   
Sbjct: 61  SVGKPY-------------ICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 72.5 bits (179), Expect = 2e-16
 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 4/93 (4%)

Query: 179 HSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTH 238
            S      C +C + F+ +  L  H  +H+G KP+ C  C  RF     +  HVR  H  
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDG 60

Query: 239 E--KPHKCSICDYASVELSKMRNHM-RSHTGER 268
              KP+ C  C         +  H+ + H+G  
Sbjct: 61  SVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 66.7 bits (164), Expect = 3e-14
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 15/83 (18%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQ 295
            +      C IC     ++  +  H  SH+GE+PY              C +C      +
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPY-------------SCPVCGLRFKRK 48

Query: 296 RHLESHMLIHT--DQKPYLCDHC 316
             +  H+  H     KPY+C  C
Sbjct: 49  DRMSYHVRSHDGSVGKPYICQSC 71

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 65.6 bits (161), Expect = 6e-14
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 2/84 (2%)

Query: 159 CNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTG--VKPHKCK 216
           C  C       Y L RH  SHS E+P+ C VC   FK    +  H+ +H G   KP+ C+
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69

Query: 217 YCESRFTTSGELVRHVRYKHTHEK 240
            C   F+    L  H++  H+   
Sbjct: 70  SCGKGFSRPDHLNGHIKQVHSGPS 93

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 70.6 bits (174), Expect = 7e-16
 Identities = 21/90 (23%), Positives = 30/90 (33%), Gaps = 12/90 (13%)

Query: 199 SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE----KPHKCSICDYASVEL 254
           S  +   THTG KP+ C +C+  F     L  H + ++           CS C       
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFTRR 60

Query: 255 SKMRNHMRSHTGERPYQLHCKSHEGEKCWK 284
           + M  H  +  G           EGE    
Sbjct: 61  NTMARHADNCAGPDGV-------EGENSGP 83

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 69.9 bits (172), Expect = 2e-15
 Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 5/80 (6%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTG----VKPHKCKYCESRFTTSGE 227
                ++H+ E+P+ CS C++ F+    L  H   +           C  C   FT    
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 228 LVRHVRYKHTHEKPHKCSIC 247
           + RH           +    
Sbjct: 63  MARHAD-NCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 66.8 bits (164), Expect = 2e-14
 Identities = 15/91 (16%), Positives = 27/91 (29%), Gaps = 10/91 (10%)

Query: 226 GELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKC 285
           G      R  HT EKP+ CS CD    +   +  H + +            +     + C
Sbjct: 1   GSSGSSGRT-HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP---------NFVPAAFVC 50

Query: 286 ELCPYASSSQRHLESHMLIHTDQKPYLCDHC 316
             C    + +  +  H            ++ 
Sbjct: 51  SKCGKTFTRRNTMARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 49.1 bits (118), Expect = 5e-08
 Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 4/64 (6%)

Query: 159 CNYCNYTSPKRYLLARHLKSHSEE----RPHKCSVCERGFKTIASLQNHINTHTGVKPHK 214
           C++C+ T  ++ LL  H K + +         CS C + F    ++  H +   G    +
Sbjct: 18  CSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVE 77

Query: 215 CKYC 218
            +  
Sbjct: 78  GENS 81

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 70.5 bits (173), Expect = 7e-16
 Identities = 14/72 (19%), Positives = 20/72 (27%), Gaps = 3/72 (4%)

Query: 179 HSEERPHKCSVCERGFKTIASLQNHINTHT---GVKPHKCKYCESRFTTSGELVRHVRYK 235
            S     +C +C    +  ASL  H   H          C++C  RF     +  H    
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 236 HTHEKPHKCSIC 247
           H           
Sbjct: 62  HPALLLAPQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 64.7 bits (158), Expect = 1e-13
 Identities = 12/77 (15%), Positives = 17/77 (22%), Gaps = 4/77 (5%)

Query: 207 HTGVKPHKCKYCESRFTTSGELVRHVRYKHTH---EKPHKCSICDYASVELSKMRNHMRS 263
            +G    +C+ C         L  H R KH          C  C     +   +  H   
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

Query: 264 HTGERPYQLHCKSHEGE 280
                       S    
Sbjct: 61  SHPALLLAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 61.7 bits (150), Expect = 1e-12
 Identities = 10/81 (12%), Positives = 19/81 (23%), Gaps = 10/81 (12%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQ 295
            +     +C IC +   + + +  H R H                  + CE C       
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETV----------AALRFPCEFCGKRFEKP 51

Query: 296 RHLESHMLIHTDQKPYLCDHC 316
             + +H               
Sbjct: 52  DSVAAHRSKSHPALLLAPQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.9 bits (109), Expect = 5e-07
 Identities = 10/57 (17%), Positives = 17/57 (29%), Gaps = 16/57 (28%)

Query: 264 HTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQ---KPYLCDHCD 317
            +G    Q             CE+C +    +  L  H   H +      + C+ C 
Sbjct: 2   SSGSSGLQ-------------CEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCG 45

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 3/63 (4%)

Query: 157 HMCNYCNYTSPKRYLLARHLKSHSE---ERPHKCSVCERGFKTIASLQNHINTHTGVKPH 213
             C  C +T  ++  L  H + H+E        C  C + F+   S+  H +        
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 214 KCK 216
             +
Sbjct: 68  APQ 70

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 70.5 bits (174), Expect = 8e-16
 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 186 KCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
            C +C + FK  ++L  H+  H+  +P+ C+YC  RF    ++ +H    HT EKPHKC 
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI-HTGEKPHKCQ 61

Query: 246 ICDYASVELSKMRNHMRSHTG 266
           +C  A  + S +  H R HTG
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 61.3 bits (150), Expect = 2e-12
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 14/93 (15%)

Query: 214 KCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLH 273
            CK C   F  S  L  H+   H+  +P+ C  C     + S M+ H   HTGE+P+   
Sbjct: 3   DCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPH--- 58

Query: 274 CKSHEGEKCWKCELCPYASSSQRHLESHMLIHT 306
                     KC++C  A S   +L +H   HT
Sbjct: 59  ----------KCQVCGKAFSQSSNLITHSRKHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 61.3 bits (150), Expect = 2e-12
 Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)

Query: 159 CNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC 218
           C  C  +  +   L+ HL  HS+ RP+ C  C + F   + ++ H   HTG KPHKC+ C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 219 ESRFTTSGELVRHVRYKHT 237
              F+ S  L+ H R KHT
Sbjct: 64  GKAFSQSSNLITHSR-KHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 50.9 bits (123), Expect = 1e-08
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 13/74 (17%)

Query: 243 KCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHM 302
            C IC  +    S +  H+  H+  RPY              C+ C      +  ++ H 
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPY-------------PCQYCGKRFHQKSDMKKHT 49

Query: 303 LIHTDQKPYLCDHC 316
            IHT +KP+ C  C
Sbjct: 50  FIHTGEKPHKCQVC 63

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 39.3 bits (93), Expect = 1e-04
 Identities = 18/51 (35%), Positives = 27/51 (52%)

Query: 159 CNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTG 209
           C YC     ++  + +H   H+ E+PHKC VC + F   ++L  H   HTG
Sbjct: 32  CQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 69.4 bits (171), Expect = 2e-15
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 199 SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMR 258
           S           + +KC  C   F+ S +L +H R  HT EKP+KC  C  A ++ S + 
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT-HTGEKPYKCDECGKAFIQRSHLI 63

Query: 259 NHMRSHTGERPY 270
            H R HTG  P 
Sbjct: 64  GHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 68.2 bits (168), Expect = 5e-15
 Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 231
             R      E R +KC  C + F   + L  H  THTG KP+KC  C   F     L+ H
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

Query: 232 VRYKHTHEKPHK 243
            R  HT   P  
Sbjct: 66  HR-VHTGSGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 61.3 bits (150), Expect = 1e-12
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 14/87 (16%)

Query: 225 SGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWK 284
           SG   R    +    + +KC  C  +    S +  H R+HTGE+PY             K
Sbjct: 3   SGSSGRSEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPY-------------K 48

Query: 285 CELCPYASSSQRHLESHMLIHTDQKPY 311
           C+ C  A   + HL  H  +HT   P 
Sbjct: 49  CDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.0 bits (118), Expect = 4e-08
 Identities = 16/62 (25%), Positives = 19/62 (30%), Gaps = 13/62 (20%)

Query: 255 SKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD 314
                        R Y             KC+ C  + S    L  H   HT +KPY CD
Sbjct: 4   GSSGRSEWQQRERRRY-------------KCDECGKSFSHSSDLSKHRRTHTGEKPYKCD 50

Query: 315 HC 316
            C
Sbjct: 51  EC 52

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 67.6 bits (166), Expect = 6e-15
 Identities = 13/62 (20%), Positives = 20/62 (32%), Gaps = 1/62 (1%)

Query: 206 THTGVKPHKCKYCESRFTTSGELVRHVR-YKHTHEKPHKCSICDYASVELSKMRNHMRSH 264
           T  G   ++CK C   +T      RH       + K + C  C         M  H++  
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

Query: 265 TG 266
             
Sbjct: 64  HK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 179 HSEERPHKCSVCERGFKTIASLQNH--INTHTGVKPHKCKYCESRFTTSGELVRHVRYKH 236
              E  ++C VC R +  I++   H   +    VK + C +C   FT    +  HV+  H
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 10/58 (17%), Positives = 18/58 (31%), Gaps = 15/58 (25%)

Query: 262 RSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLI--HTDQKPYLCDHCD 317
            +  GE  Y             +C++C    +   +   H +     + K Y C  C 
Sbjct: 3   FTKEGEHTY-------------RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCF 47

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 40.2 bits (95), Expect = 4e-05
 Identities = 8/54 (14%), Positives = 17/54 (31%), Gaps = 2/54 (3%)

Query: 159 CNYCNYTSPKRYLLARHLKS--HSEERPHKCSVCERGFKTIASLQNHINTHTGV 210
           C  C+          RH  +      + + C  C + F    ++  H+     +
Sbjct: 13  CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 66.9 bits (164), Expect = 2e-14
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 185 HKCSV--CERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEK 240
           + C    C + FK    L+ H  +HT   P++C +  C+ RF+    L RH +  H    
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGYP 60

Query: 241 PHKCSICDYASVELSKMRNHMR 262
             K   C +     +    H+ 
Sbjct: 61  CKKDDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 63.0 bits (154), Expect = 5e-13
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 157 HMCNY--CNYTSPKRYLLARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKP 212
           ++C++  C     K   L  H  SH+++ P++C    C++ F   + L+ H   H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 213 HKCKYCESRFTTSGELVRHVRYKH 236
            K   C     T    ++HV   H
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 56.5 bits (137), Expect = 1e-10
 Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 18/94 (19%)

Query: 213 HKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCS--ICDYASVELSKMRNHMRSHTGER 268
           + C +  C   F    +L  H    HT + P++C    CD      S+++ H + H G  
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 269 PYQLHCKSHEGEKCWKCELCPYASSSQRHLESHM 302
                          K + C +   +      H+
Sbjct: 61  CK-------------KDDSCSFVGKTWTLYLKHV 81

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 48.8 bits (117), Expect = 5e-08
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 13/79 (16%)

Query: 242 HKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLE 299
           + C    C  A  + ++++ H  SHT + PY+  C  HEG  C K     ++  S   L+
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYE--CP-HEG--CDKR----FSLPS--RLK 50

Query: 300 SHMLIHTDQKPYLCDHCDQ 318
            H  +H        D C  
Sbjct: 51  RHEKVHAGYPCKKDDSCSF 69

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 64.6 bits (157), Expect = 2e-13
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 8/74 (10%)

Query: 206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDY--------ASVELSKM 257
                     K C+  F+T  ELV HV  +H         +C +        +     K+
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 258 RNHMRSHTGERPYQ 271
            NH+R HTGE+   
Sbjct: 79  VNHIRVHTGEKSGP 92

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 57.7 bits (139), Expect = 4e-11
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 10/76 (13%)

Query: 179 HSEERPHKCSVCERGFKTIASLQNHIN-THTGVKPHKCKYCESR--------FTTSGELV 229
              +       C+R F T+  L  H+   H G        C           F    +LV
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 230 RHVRYKHTHEKPHKCS 245
            H+R  HT EK    S
Sbjct: 80  NHIR-VHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 16/68 (23%), Positives = 20/68 (29%), Gaps = 9/68 (13%)

Query: 157 HMCNYCNYTSPKRYLLARHL-KSHSEERPHK--------CSVCERGFKTIASLQNHINTH 207
                C+ T    + L  H+   H               C    + FK    L NHI  H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 208 TGVKPHKC 215
           TG K    
Sbjct: 86  TGEKSGPS 93

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 63.9 bits (156), Expect = 2e-13
 Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 4/66 (6%)

Query: 172 LARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGE 227
            +      S  R H CS   C + +   + L+ H  THTG KP  C +  CE RF  S E
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64

Query: 228 LVRHVR 233
           L RH R
Sbjct: 65  LSRHRR 70

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 52.4 bits (126), Expect = 2e-09
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 11/74 (14%)

Query: 198 ASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCSI--CDYA--- 250
           +         + ++ H C +  C   +  S  L  H R  HT EKP  CS   C+     
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFAR 61

Query: 251 SVELSKMRNHMRSH 264
           S ELS+   H R+H
Sbjct: 62  SDELSR---HRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 42.0 bits (99), Expect = 1e-05
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 235 KHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQ 271
             +  + H CS   C     + S ++ H R+HTGE+P+ 
Sbjct: 11  DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFS 49

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 39.7 bits (93), Expect = 7e-05
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 11/61 (18%)

Query: 255 SKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD 314
           S         +  R +   C SH G  C K     Y  SS  HL++H   HT +KP+ C 
Sbjct: 3   SGSSGPQIDSSRIRSH--IC-SHPG--CGKT----YFKSS--HLKAHTRTHTGEKPFSCS 51

Query: 315 H 315
            
Sbjct: 52  W 52

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 39.3 bits (92), Expect = 9e-05
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 157 HMCNY--CNYTSPKRYLLARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTH 207
           H+C++  C  T  K   L  H ++H+ E+P  CS   CER F     L  H  TH
Sbjct: 18  HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 63.6 bits (156), Expect = 2e-13
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 231
            +     HS E+P+ C  C + F   + L  H   HTG KP+KC  C   F+ +  L+ H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 232 VRYKHTHEKPH 242
            R  HT     
Sbjct: 62  QRI-HTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 58.6 bits (143), Expect = 1e-11
 Identities = 26/84 (30%), Positives = 31/84 (36%), Gaps = 14/84 (16%)

Query: 228 LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL 287
                   H+ EKP+ C  C  A    S +  H R HTGE+PY             KC  
Sbjct: 2   SSGSSGI-HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPY-------------KCLE 47

Query: 288 CPYASSSQRHLESHMLIHTDQKPY 311
           C  A S    L +H  IHT     
Sbjct: 48  CGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 46.3 bits (111), Expect = 3e-07
 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 13/57 (22%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC 316
               H+GE+PY              C  C  A S    L  H  +HT +KPY C  C
Sbjct: 5   SSGIHSGEKPY-------------GCVECGKAFSRSSILVQHQRVHTGEKPYKCLEC 48

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 61.9 bits (151), Expect = 7e-13
 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 5/67 (7%)

Query: 175 HLKSHSE--ERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVR 230
           +L ++     RP+ C V  C+R F     L  HI  HTG KP +C+ C   F+ S  L  
Sbjct: 8   NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67

Query: 231 HVRYKHT 237
           H+R  HT
Sbjct: 68  HIR-THT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 61.6 bits (150), Expect = 1e-12
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 5/68 (7%)

Query: 200 LQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKM 257
           L N++      +P+ C    C+ RF+ S EL RH+R  HT +KP +C IC         +
Sbjct: 9   LLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHL 65

Query: 258 RNHMRSHT 265
             H+R+HT
Sbjct: 66  TTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 54.2 bits (131), Expect = 5e-10
 Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 18/88 (20%)

Query: 221 RFTTSGELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHE 278
                  L+ +V       +P+ C +  CD       ++  H+R HTG++P+Q       
Sbjct: 2   EPHPMNNLLNYVV---PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQ------- 51

Query: 279 GEKCWKCELCPYASSSQRHLESHMLIHT 306
                 C +C    S   HL +H+  HT
Sbjct: 52  ------CRICMRNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHT 208
           L RH++ H+ ++P +C +C R F     L  HI THT
Sbjct: 37  LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 39.6 bits (93), Expect = 8e-05
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 13/64 (20%)

Query: 254 LSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           ++ + N++      RPY           C   E C    S    L  H+ IHT QKP+ C
Sbjct: 6   MNNLLNYVV--PKMRPY----------AC-PVESCDRRFSRSDELTRHIRIHTGQKPFQC 52

Query: 314 DHCD 317
             C 
Sbjct: 53  RICM 56

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 63.2 bits (153), Expect = 9e-13
 Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 9/104 (8%)

Query: 199 SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMR 258
           S + + +  TG    +CK C + + T  EL  H+    T          D  + +     
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN--ETGHYRDDNHETDNNNPKRWSKP 63

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHM 302
                   E          + +K  KC  C ++  S + L  HM
Sbjct: 64  RKRSLLEMEG-------KEDAQKVLKCMYCGHSFESLQDLSVHM 100

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 56.7 bits (136), Expect = 2e-10
 Identities = 17/103 (16%), Positives = 32/103 (31%), Gaps = 6/103 (5%)

Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINT--HTGVKPHKCKYCESRFTTSGELVRHV 232
           +    +     +C  C   + T+  L  H+N   H     H+      +  +       +
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69

Query: 233 RY--KHTHEKPHKCSICDYASVELSKMRNHM--RSHTGERPYQ 271
               K   +K  KC  C ++   L  +  HM    H  +    
Sbjct: 70  EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 49.0 bits (116), Expect = 8e-08
 Identities = 15/83 (18%), Positives = 24/83 (28%), Gaps = 8/83 (9%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQ 295
            T     +C  C  A   L ++  HM   TG           +  +        ++   +
Sbjct: 14  FTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYR-------DDNHETDNNNPKRWSKPRK 65

Query: 296 RHLESHMLIHTDQKPYLCDHCDQ 318
           R L         QK   C +C  
Sbjct: 66  RSLLEMEGKEDAQKVLKCMYCGH 88

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 43.2 bits (101), Expect = 9e-06
 Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 6/93 (6%)

Query: 159 CNYCNYTSPKRYLLARHLKS--HSEERPHKCSVCERGFKTI---ASLQNHINTHTGVKPH 213
           C  C+        L  H+    H  +  H+         +     SL          K  
Sbjct: 22  CKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL 81

Query: 214 KCKYCESRFTTSGELVRH-VRYKHTHEKPHKCS 245
           KC YC   F +  +L  H ++ KH  +     S
Sbjct: 82  KCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSS 114

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 59.6 bits (145), Expect = 3e-12
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 202 NHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP  C +  C  RF+ S EL RH R  H+  KP   S
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRR-SHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 47.3 bits (113), Expect = 7e-08
 Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 173 ARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P  C+   C   F     L  H  +H+GVKP   
Sbjct: 1   GSSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 42.3 bits (100), Expect = 4e-06
 Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 11/56 (19%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD 314
           +   S TGE+P+   C +  G  C       ++ S +  L  H   H+  KP    
Sbjct: 2   SSGSSGTGEKPFA--C-TWPG--CGWR----FSRSDE--LSRHRRSHSGVKPSGPS 46

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 20/58 (34%), Positives = 26/58 (44%)

Query: 183 RPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEK 240
           R   C VC R F     L+ H  +HT  KP+ C  C   FT    L+RH +  H+   
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 51.3 bits (124), Expect = 3e-09
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHM-RSHTGE 267
           +   C+ C   F     L RH R  HT+EKP+ C +C+ A      +  H  + H+G 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 14/68 (20%)

Query: 240 KPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLE 299
           +   C +C  A      ++ H RSHT E+PY              C LC  A + +  L 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPY-------------PCGLCNRAFTRRDLLI 47

Query: 300 SHML-IHT 306
            H   IH+
Sbjct: 48  RHAQKIHS 55

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 39.0 bits (92), Expect = 8e-05
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHIN-THTG 209
           L RH +SH+ E+P+ C +C R F     L  H    H+G
Sbjct: 18  LKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 15/37 (40%), Positives = 23/37 (62%)

Query: 281 KCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCD 317
           + + CE+C  A + Q HL+ H   HT++KPY C  C+
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCN 37

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 56.0 bits (136), Expect = 7e-11
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHI-NTHTGVKPHKCKYCESRFTT 224
              S S  +P+ C  C +GF     L  HI   HT  +PHKC+   S  ++
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 55.3 bits (134), Expect = 1e-10
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC 247
           +  ++ +  KP+ C+ C   F+    L  H++  HT E+PHKC + 
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW 47

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 14/59 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHM-LIHTDQKPYLCDHC 316
           +   S +  +PY              C+ C    S   HL  H+  +HT ++P+ C   
Sbjct: 2   SSGSSGSVGKPY-------------ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW 47

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 41.8 bits (99), Expect = 8e-06
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 14/60 (23%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRS-HTGERPYQLHCKSHEGEKCWKCELCPYASSS 294
            +  KP+ C  C         +  H++  HT ERP+             KC++     SS
Sbjct: 7   GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPH-------------KCQVWVSGPSS 53

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 18/44 (40%), Positives = 25/44 (56%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP++C  C   F  +  L+RH RY HT EKP   S
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHI-NTHTGVKPHKC 215
                S + ++P++C  C + F    SL  H    HTG KP   
Sbjct: 1   GSSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 14/56 (25%), Positives = 19/56 (33%), Gaps = 14/56 (25%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHM-LIHTDQKPYLC 313
           +   S TG++PY             +C  C  A      L  H    HT +KP   
Sbjct: 2   SSGSSGTGKKPY-------------ECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRS-HTGERPYQ 271
            T +KP++C  C  A ++ + +  H R  HTGE+P  
Sbjct: 7   GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSG 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP +CK C   F+ S  L +H+R  H    P   S
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLR-SHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P +C  C   F    SL  H+ +H    P   
Sbjct: 1   GSSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 6e-07
 Identities = 11/39 (28%), Positives = 14/39 (35%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHC 274
            T EKP +C  C         +  H+RSH    P     
Sbjct: 7   GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 5e-06
 Identities = 12/56 (21%), Positives = 17/56 (30%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE+P+             +C+ C    S    L  H+  H    P     
Sbjct: 3   SGSSGTGEKPF-------------QCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP+KC  C   FT    L  H +  HT E+    S
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKC-HTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P+KCS C + F   + L+ H   HTG +    
Sbjct: 1   GSSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP+KCS C  +    S++R H + HTGER   
Sbjct: 7   GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSG 42

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 13/55 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +   S TGE+PY             KC  C  + + +  L  H   HT ++    
Sbjct: 2   SSGSSGTGEKPY-------------KCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++  GV P+KC  CE  F+    L+ H R  HT EKP   S
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQR-MHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
              S +   P+KCS CE+ F     L  H   HT  KP   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 44.8 bits (107), Expect = 5e-07
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                P+KCS C+ +     ++  H R HT E+P  
Sbjct: 7   GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSG 42

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 14/54 (25%), Positives = 18/54 (33%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S  G  PY             KC  C  + S +  L  H  +HT +KP   
Sbjct: 3   SGSSGAGVNPY-------------KCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP+ C  C   FT    L++H +  HT +KP   S
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKI-HTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 13/57 (22%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
           +   S TGE+PY              C  C  A + + +L  H  IHT QKP     
Sbjct: 2   SSGSSGTGEKPY-------------ICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 9e-07
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P+ C+ C + F   ++L  H   HT  KP   
Sbjct: 1   GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP+ C+ C  A    S +  H + HT ++P  
Sbjct: 7   GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSG 42

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY 270
              EKP+ C IC      L  +++H+R HTG  P 
Sbjct: 6   SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPH 242
              +  G KP+ C+ C +RF     L  H+R  HT   P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRI-HTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 46.7 bits (112), Expect = 9e-08
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPH 213
              S   E+P+ C +C   F+ + +L++H+  HTG  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 13/52 (25%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPY 311
              S  GE+PY              CE+C       + L+SH+ IHT   P 
Sbjct: 2   SSGSSGGEKPY-------------PCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++  G K  KC+ C+  F+ +  L  H    H  EKP   S
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNV-HVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
              S   E+  KC  C+  F   +SL+ H N H G KP   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 9e-08
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
              EK  KC  CD    + S +R H   H GE+P  
Sbjct: 7   GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSG 42

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 12/54 (22%), Positives = 16/54 (29%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S  GE+ +             KC  C    S    L  H  +H  +KP   
Sbjct: 3   SGSSGMGEKTW-------------KCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.9 bits (123), Expect = 3e-09
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP +C  C+  F T   L+ H R  HT EKP   S
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQR-THTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P +CS C++ F T ++L  H  THTG KP   
Sbjct: 1   GSSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP +CS C  A    S +  H R+HTGE+P  
Sbjct: 2   SSGS-SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSG 42

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 13/55 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +   S TGE+P+             +C  C  A +++ +L  H   HT +KP   
Sbjct: 2   SSGSSGTGEKPF-------------ECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ +  K H+C  C   FT    L +H R  HT EKP   S
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRI-HTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S S  + H+C  C RGF   + L  H   HTG KP   
Sbjct: 1   GSSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY 270
            +  K H+C  C       S +  H R HTGE+P 
Sbjct: 7   GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPS 41

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 13/55 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +   S +  + +             +C  C    + + HL  H  IHT +KP   
Sbjct: 2   SSGSSGSSTKSH-------------QCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP+KC  C   FT    L  H +  HT E+    S
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS-HTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P+KCS C + F   + L  H  +HTG +    
Sbjct: 1   GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP+KCS C  A    S +  H +SHTGER   
Sbjct: 2   SSGS-SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSG 42

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 14/55 (25%), Positives = 20/55 (36%), Gaps = 13/55 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +   S TGE+PY             KC  C  A + +  L  H   HT ++    
Sbjct: 2   SSGSSGTGEKPY-------------KCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 50.2 bits (121), Expect = 5e-09
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY 270
              EKP+KC  C    V+++ +R H+  HTG  P 
Sbjct: 6   SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 13/52 (25%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPY 311
              S  GE+PY             KCE C        HL +H+LIHT   P 
Sbjct: 2   SSGSSGGEKPY-------------KCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.9 bits (115), Expect = 3e-08
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPH 242
              +  G KP+KC+ C +RF     L  HV   HT   P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLI-HTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPH 213
              S   E+P+KC  C   F  +A L+ H+  HTG  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-09
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP KC  C   F     L RH    HT EKP   S
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSM-VHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 2e-07
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 13/56 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD 314
           +   S TGE+P+             KC++C  +   +  L  H ++HT +KP    
Sbjct: 2   SSGSSGTGEKPF-------------KCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P KC +C + F   + L  H   HT  KP   
Sbjct: 1   GSSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 9e-07
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP KC IC  +    S++  H   HT E+P  
Sbjct: 7   GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSG 42

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.2 bits (121), Expect = 6e-09
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP+KC+ C   F    +L  H    HT EKP   S
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMV-HTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 13/55 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +   S TGE+PY             KCE C      +R L +H ++HT +KP   
Sbjct: 2   SSGSSGTGEKPY-------------KCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P+KC  C +GF     L  H   HTG KP   
Sbjct: 1   GSSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP+KC  C    +    +  H   HTGE+P  
Sbjct: 7   GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSG 42

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 7e-09
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG K + CK C   F+ +  L++H R  H+ EKP   S
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERL-HSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 13/55 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +   S TGE+ Y              C+ C  + S    L  H  +H+ +KP   
Sbjct: 2   SSGSSGTGEKLY-------------NCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+ + C  C + F     L  H   H+G KP   
Sbjct: 1   GSSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EK + C  C  +      +  H R H+GE+P  
Sbjct: 7   GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSG 42

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 7e-09
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ +G KP KC+ C  RFT + +L  H R  HT EKP   S
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRV-HTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S S E+P KC  C + F   + L +H   HTG KP   
Sbjct: 1   GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 7e-07
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 13/55 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +   S +GE+P+             KCE C    +    L SH  +HT +KP   
Sbjct: 2   SSGSSGSGEKPF-------------KCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  + EKP KC  C     + S++ +H R HTGE+P  
Sbjct: 2   SSGSS-GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSG 42

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 8e-09
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++  G KP++C  C   F+ S  L +H    HT EKP   S
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWIT-HTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S   E+P++CS C + F     L  H  THT  KP   
Sbjct: 1   GSSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 14/54 (25%), Positives = 19/54 (35%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S  GE+PY             +C  C  + S    L  H + HT +KP   
Sbjct: 3   SGSSGEGEKPY-------------QCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
              EKP++CS C  +     ++  H  +HT E+P  
Sbjct: 7   GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSG 42

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 49.8 bits (120), Expect = 8e-09
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TGVKP+ C  C   F+   +L+ H R  HT  KP   S
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR-SHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S +  +P+ CS C + F   + L  H  +HTGVKP   
Sbjct: 1   GSSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T  KP+ CS C       S++  H RSHTG +P  
Sbjct: 2   SSGS-SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSG 42

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 41.4 bits (98), Expect = 9e-06
 Identities = 14/55 (25%), Positives = 17/55 (30%), Gaps = 13/55 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +   S TG +PY              C  C    S +  L  H   HT  KP   
Sbjct: 2   SSGSSGTGVKPY-------------GCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 8e-09
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG  P  C  C   FT    L+ H +  HT E+P   S
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQK-IHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
              S + E P  CS C + F    +L  H   HTG +P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T E P  CS C       + +  H + HTGERP  
Sbjct: 7   GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSG 42

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 13/55 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +   S TGE P+              C  C    + + +L  H  IHT ++P   
Sbjct: 2   SSGSSGTGENPF-------------ICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 8e-09
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG +P+ C  C   FT    L++H +  HT EKP   S
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKI-HTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 1e-07
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 174 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
               S + ERP+ C+VC + F   ++L  H   HTG KP   
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 8e-07
 Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGERPY              C +C  A + + +L  H  IHT +KP     
Sbjct: 3   SGSSGTGERPY-------------ICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS 45

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.2 bits (103), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T E+P+ C++C  A  + S +  H + HTGE+P  
Sbjct: 2   SSGS-SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSG 42

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.9 bits (120), Expect = 8e-09
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP KC  C   F    +L+ H R  H  +K    S
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQR-THVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 174 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
               S + E+P KC+ C + F   + L  H  TH   K    
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.9 bits (107), Expect = 5e-07
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP KC+ C  A    S++  H R+H  ++   
Sbjct: 7   GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSG 42

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 14/54 (25%), Positives = 16/54 (29%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S TGE+P              KC  C  A   +  L  H   H D K    
Sbjct: 3   SGSSGTGEKPC-------------KCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 9e-09
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ +G +P+ C  C   F     L+ H++  H  EK    S
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKR-HFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S S ERP+ C+ C + F   + L  H+  H   K    
Sbjct: 1   GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 13/54 (24%), Positives = 16/54 (29%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S +GERPY              C  C        HL  H+  H  +K    
Sbjct: 3   SGSSGSGERPY-------------GCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 8/36 (22%), Positives = 16/36 (44%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            + E+P+ C+ C       S +  H++ H  E+   
Sbjct: 7   GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSG 42

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 9e-09
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP++C  C   FT    L  H +  HT EKP   S
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKI-HTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P++C+ C + F   ++L  H   HTG KP   
Sbjct: 1   GSSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 7e-07
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE+PY             +C  C  A + + +L +H  IHT +KP     
Sbjct: 3   SGSSGTGEKPY-------------RCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP++C+ C  A  + S +  H + HTGE+P  
Sbjct: 7   GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSG 42

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP KC  C   F+    L  H +  HT EKP   S
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHK-LHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 13/57 (22%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
           +   S TGE+P+             KC  C    S +  L  H  +HT +KP     
Sbjct: 2   SSGSSGTGEKPF-------------KCVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P KC  C +GF   ++L  H   HTG KP   
Sbjct: 1   GSSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP KC  C       S +  H + HTGE+P  
Sbjct: 7   GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSG 42

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++  G KP+ C  C   F++   L+ H+R  H+ EKP   S
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMR-THSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P+ CS C + F + + L  H+ TH+G KP   
Sbjct: 1   GSSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 7e-07
 Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 13/55 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +   S  GE+PY              C  C  A SS+ +L  HM  H+ +KP   
Sbjct: 2   SSGSSGAGEKPY-------------GCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                    EKP+ CS C  A    S +  HMR+H+GE+P  
Sbjct: 2   SSGS-SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSG 42

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ +  KP+KC+ C   +     L  H R  H  EK    S
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRV-HMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S S E+P+KC  C +G+    +L  H   H G K    
Sbjct: 1   GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 13/55 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +   S + E+PY             KCE C    + + +L+ H  +H  +K    
Sbjct: 2   SSGSSGSVEKPY-------------KCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            + EKP+KC  C         +  H R H GE+   
Sbjct: 7   GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSG 42

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++  G K  KC  C+  FT S  L  H R  HT EKP   S
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRI-HTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + ++  KC+ C++ F   +SL  H   HTG KP   
Sbjct: 1   GSSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 12/54 (22%), Positives = 17/54 (31%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S  G++ +             KC  C    +    L  H  IHT +KP   
Sbjct: 3   SGSSGAGKKLF-------------KCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
              +K  KC+ C     + S +  H R HTGE+P  
Sbjct: 7   GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSG 42

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP+KC+ C   + +   L  H +  HT E+P   S
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK-VHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P+KC  C +G+ +  +L  H   HTG +P   
Sbjct: 1   GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 6e-07
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S TGE+PY             KCE C    +S+ +L+ H  +HT ++P   
Sbjct: 3   SGSSGTGEKPY-------------KCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP+KC  C         +  H + HTGERP  
Sbjct: 7   GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSG 42

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ +G KP+KC  C   +    +L  H R  HT EK    S
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQR-VHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
              S S E+P+KC  C +G+K    L  H   HTG K    
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 13/56 (23%), Positives = 20/56 (35%), Gaps = 13/56 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD 314
           +   S +GE+PY             KC  C      +  L+ H  +HT +K     
Sbjct: 2   SSGSSGSGEKPY-------------KCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            + EKP+KC  C         +  H R HTGE+   
Sbjct: 7   GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSG 42

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ +G KP KC+ C   F T+ +   H R  H+ EKP   S
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQR-SHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S S E+P KC  C +GF T +   +H  +H+G KP   
Sbjct: 1   GSSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHC 274
            + EKP KC  C       S+  +H RSH+GE+P     
Sbjct: 7   GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS 45

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 13/56 (23%), Positives = 20/56 (35%), Gaps = 13/56 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD 314
           +   S +GE+P+             KCE C     +     SH   H+ +KP    
Sbjct: 2   SSGSSGSGEKPF-------------KCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S S E+P++C+ C + F   + L  H  TH GV     
Sbjct: 1   GSSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.8 bits (112), Expect = 9e-08
 Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKC 244
           +  ++ +G KP++C  C   F     L+ H R  H        
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHER-THAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  + EKP++C+ C  A +  S +  H R+H G     
Sbjct: 2   SSGS-SGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPS 42

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 11/55 (20%), Positives = 16/55 (29%), Gaps = 13/55 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +   S +GE+PY             +C  C  A   +  L  H   H        
Sbjct: 2   SSGSSGSGEKPY-------------ECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ +G KP++CK C   F   G L +H R  HT E+    S
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRV-HTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 5e-07
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK 216
                S S ++P++C  C + F  I  L  H   HTG +     
Sbjct: 1   GSSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKS 276
            + +KP++C  C    +++  +  H R HTGER       S
Sbjct: 7   GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSG--PSS 45

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S +G++PY             +C+ C        HL  H  +HT ++    
Sbjct: 3   SGSSGSGKKPY-------------ECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ +G KP KCK C   F  +  L  H+R  HT EKP   S
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRI-HTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S S E+P KC  C + F+    L +H+  HTG KP   
Sbjct: 1   GSSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 6e-07
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S +GE+P+             KC+ C  A     HL SH+ IHT +KP   
Sbjct: 3   SGSSGSGEKPF-------------KCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHC 274
                  + EKP KC  C  A  +   + +H+R HTGE+P     
Sbjct: 2   SSGSS-GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS 45

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 49.7 bits (118), Expect = 1e-08
 Identities = 16/55 (29%), Positives = 30/55 (54%)

Query: 157 HMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVK 211
           ++C  C     K  +L +H+++H++ RP+ C+ C   FKT  +L  H+ +    K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.0 bits (111), Expect = 1e-07
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 213 HKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER 268
           + C+ C  R      L +H+R  HT  +P+ C+ C+++      +  HM+S    +
Sbjct: 2   YICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 45.5 bits (107), Expect = 4e-07
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 185 HKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEK 240
           + C  C    K  + L+ HI THT V+P+ C YC   F T G L +H++    H K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK-SKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 44.3 bits (104), Expect = 9e-07
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 13/68 (19%)

Query: 242 HKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESH 301
           + C  C     + S ++ H+R+HT  RPY              C  C ++  ++ +L  H
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPY-------------HCTYCNFSFKTKGNLTKH 48

Query: 302 MLIHTDQK 309
           M      K
Sbjct: 49  MKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.2 bits (88), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 284 KCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQ 318
            CE C         L+ H+  HTD +PY C +C+ 
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNF 37

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ +G KP+ C YC   F  S ELVRH R  HT EKP   S
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRI-HTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 174 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
               S S E+P+ C  C + F   A L  H   HTG KP   
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 15/56 (26%), Positives = 19/56 (33%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S +GE+PY              C+ C  A      L  H  IHT +KP     
Sbjct: 3   SGSSGSGEKPY-------------VCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  + EKP+ C  C  A    +++  H R HTGE+P  
Sbjct: 2   SSGS-SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSG 42

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP +C +C   F   G LV H R  HT EK    S
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRI-HTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 13/55 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +   S TG++P+             +C  C  +  ++ +L +H  IHT +K    
Sbjct: 2   SSGSSGTGQKPF-------------ECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T +KP +C+ C  +      +  H R HTGE+   
Sbjct: 7   GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGP 42

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + ++P +C+ C + F+   +L  H   HTG K    
Sbjct: 1   GSSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP +C  C   F+ S +L  H R  HT EKP   S
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRI-HTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 174 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
               S + E+P +C+ C + F   + L  H   HTG KP   
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 44.0 bits (105), Expect = 9e-07
 Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE+P+             +C  C  + S    L +H  IHT +KP     
Sbjct: 3   SGSSGTGEKPF-------------ECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP +C+ C  +    S++  H R HTGE+P  
Sbjct: 2   SSGSS-GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSG 42

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP+KC+ C   F  S  LV+H    H+ E+P   S
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSV-HSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P+KC VC + F+  + L  H + H+G +P   
Sbjct: 1   GSSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S TGE+PY             KC++C  A     HL  H  +H+ ++P   
Sbjct: 3   SGSSGTGEKPY-------------KCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP+KC +C  A    S +  H   H+GERP  
Sbjct: 2   SSGSS-GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSG 42

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP+KC  C   FT +  LVRH    HT EKP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGI-HTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 1e-07
 Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 13/57 (22%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
           +   S TGE+PY             KC  C    +   HL  H  IHT +KP     
Sbjct: 2   SSGSSGTGEKPY-------------KCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 174 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
               S + E+P+KC+ C + F   + L  H   HTG KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP+KC+ C     + S +  H   HTGE+P  
Sbjct: 2   SSGSS-GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSG 42

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP++C  C   F    +L  H R  HT E P   S
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQR-IHTGENPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 6e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P++CS C + F   + L  H   HTG  P   
Sbjct: 1   GSSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP++CS C  + ++ S++  H R HTGE P  
Sbjct: 7   GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSG 42

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 14/56 (25%), Positives = 19/56 (33%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE+PY             +C  C  +   +  L  H  IHT + P     
Sbjct: 3   SGSSGTGEKPY-------------ECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP+KC  C   F+ + +L RH R  HT EKP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRI-HTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 9e-08
 Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 13/57 (22%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
           +   S TGE+PY             KC  C  A S    L  H  IHT +KP     
Sbjct: 2   SSGSSGTGEKPY-------------KCNECGKAFSQTSKLARHQRIHTGEKPSGPSS 45

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 8e-07
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 174 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
               S + E+P+KC+ C + F   + L  H   HTG KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP+KC+ C  A  + SK+  H R HTGE+P  
Sbjct: 2   SSGSS-GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSG 42

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG +PHKC  C   F  S  L++H R  HT EKP   S
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRI-HTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 9e-08
 Identities = 17/43 (39%), Positives = 20/43 (46%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + ERPHKC+ C + F   A L  H   HTG KP   
Sbjct: 1   GSSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 13/57 (22%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
           +   S TGERP+             KC  C  +     HL  H  IHT +KP     
Sbjct: 2   SSGSSGTGERPH-------------KCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T E+PHKC+ C  + ++ + +  H R HTGE+P  
Sbjct: 2   SSGS-SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSG 42

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KPH+C+ C   F+ + +L+ H R  HT E P   S
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRI-HTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 6e-07
 Identities = 14/56 (25%), Positives = 19/56 (33%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE+P+             +C  C  + S    L  H  IHT + P     
Sbjct: 3   SGSSGTGEKPH-------------ECRECGKSFSFNSQLIVHQRIHTGENPSGPSS 45

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 7e-07
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 174 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
               S + E+PH+C  C + F   + L  H   HTG  P   
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKPH+C  C  +    S++  H R HTGE P  
Sbjct: 2   SSGSS-GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSG 42

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG  P++C  C   F+   +L+ H R  H  EKP   S
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQR-THAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E P++C  C + F     L +H  TH G KP   
Sbjct: 1   GSSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 6e-07
 Identities = 16/56 (28%), Positives = 19/56 (33%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE PY             +C  C  A S +  L SH   H  +KP     
Sbjct: 3   SGSSGTGENPY-------------ECHECGKAFSRKYQLISHQRTHAGEKPSGPSS 45

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T E P++C  C  A     ++ +H R+H GE+P  
Sbjct: 7   GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSG 42

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++  G + H+C  C   F  +   ++H R  HT EKP   S
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRI-HTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S   ER H+CS C + F   ++   H   HTG KP   
Sbjct: 1   GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY 270
              E+ H+CS C    ++ S    H R HTGE+P 
Sbjct: 7   GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPS 41

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 12/55 (21%), Positives = 17/55 (30%), Gaps = 13/55 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +   S  GER +             +C  C        +   H  IHT +KP   
Sbjct: 2   SSGSSGHGERGH-------------RCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 2e-08
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ +G KP+KC  C   F     L  H R  HT  +P   S
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRI-HTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S S E+P+KCS C + F     L  H   HTG +P   
Sbjct: 1   GSSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 16/54 (29%), Positives = 19/54 (35%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S +GE+PY             KC  C  A     HL  H  IHT  +P   
Sbjct: 3   SGSSGSGEKPY-------------KCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  + EKP+KCS C  A    + +  H R HTG RP  
Sbjct: 2   SSGSS-GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSG 42

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP KC  C   +     L +H R  HT EKP   S
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRV-HTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P KC  C + +     L  H   HTG KP   
Sbjct: 1   GSSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE+P+             KC  C  + + + HL  H  +HT +KP     
Sbjct: 3   SGSSGTGEKPF-------------KCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP KC  C  +  +   +  H R HTGE+P  
Sbjct: 2   SSGSS-GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSG 42

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP+ C+ C   F    +L  H R  HT EKP   S
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRI-HTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 6e-07
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 174 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
               S + E+P+ C  C + F   + LQ H   HTG KP   
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S TGE+PY              CE C  A      L+ H  IHT +KP   
Sbjct: 3   SGSSGTGEKPY-------------NCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP+ C  C  A +  S+++ H R HTGE+P  
Sbjct: 2   SSGSS-GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSG 42

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ +G KP +C+ C  RFT +  L  H R  HT EKP   S
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRV-HTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S S E+P +C  C + F   + L +H   HTG KP   
Sbjct: 1   GSSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S +GE+P+             +CE C    +   HL SH  +HT +KP   
Sbjct: 3   SGSSGSGEKPF-------------QCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            + EKP +C  C     + S + +H R HTGE+P  
Sbjct: 7   GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSG 42

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 2e-08
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ +G KP+KC  C   FT +  L  H R  HT EKP   S
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRI-HTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S S E+P+KC+ C + F   + L NH   HTG KP   
Sbjct: 1   GSSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 13/57 (22%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
           +   S +GE+PY             KC  C    +   HL +H  IHT +KP     
Sbjct: 2   SSGSSGSGEKPY-------------KCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  + EKP+KC+ C     + S + NH R HTGE+P  
Sbjct: 2   SSGSS-GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSG 42

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 13/57 (22%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
           +   S TGE+PY              C +C  A     HL  H+ +HT +       
Sbjct: 2   SSGSSGTGEKPY-------------SCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP+ C  C   F  S  L +H+R  HT E     S
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRV-HTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK 216
                S + E+P+ C+VC + F   A L  H+  HT        
Sbjct: 1   GSSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP+ C++C  A V  + +  H+R HT E    
Sbjct: 7   GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSG 42

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.2 bits (116), Expect = 3e-08
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP+KC  C   F  +  L RH    HT EKP   S
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLI-HTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P+KC  C + F+  + L  H   HTG KP   
Sbjct: 1   GSSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 6e-07
 Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S TGE+PY             KC  C        HL  H LIHT +KP   
Sbjct: 3   SGSSGTGEKPY-------------KCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP+KC  C       S +  H   HTGE+P  
Sbjct: 2   SSGSS-GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSG 42

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++  G K +KC  C   F+ S  L  H R  HT EKP   S
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRV-HTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S   E+ +KC VC + F   + LQ H   HTG KP   
Sbjct: 1   GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S  GE+ Y             KC++C    S   HL++H  +HT +KP   
Sbjct: 3   SGSSGMGEKCY-------------KCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
              EK +KC +C     + S ++ H R HTGE+P  
Sbjct: 7   GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSG 42

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP++C  C   F+ + +L RH R  HT EKP   S
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRV-HTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 15/56 (26%), Positives = 19/56 (33%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TG +PY             +C  C  A S    L  H  +HT +KP     
Sbjct: 3   SGSSGTGGKPY-------------QCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
              S +  +P++C+ C + F   + L  H   HTG KP   
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T  KP++C+ C  A  + SK+  H R HTGE+P  
Sbjct: 7   GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSG 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             +G KP  C  CE  F++   L+ H +  H  EKP   S
Sbjct: 4   GSSGEKPFGCSCCEKAFSSKSYLLVHQQ-THAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            + EKP  CS C+ A    S +  H ++H  E+P  
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSG 40

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.8 bits (107), Expect = 5e-07
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 177 KSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
              S E+P  CS CE+ F + + L  H  TH   KP   
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 13/52 (25%)

Query: 262 RSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              +GE+P+              C  C  A SS+ +L  H   H ++KP   
Sbjct: 3   SGSSGEKPF-------------GCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP+KC  C   FT +  L RH R  HT  KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRV-HTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 16/56 (28%), Positives = 19/56 (33%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE+PY             KC  C    +   HL  H  +HT  KP     
Sbjct: 3   SGSSGTGEKPY-------------KCNECGKVFTQNSHLARHRRVHTGGKPSGPSS 45

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P+KC+ C + F   + L  H   HTG KP   
Sbjct: 1   GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 9e-06
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP+KC+ C     + S +  H R HTG +P  
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSG 42

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP++C  C   F     L +H R  HT EKP   S
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRI-HTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P++C  C + F   A+L  H   HTG KP   
Sbjct: 1   GSSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 13/57 (22%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
           +   S TGE+PY             +C  C  A + + +L  H  IHT +KP     
Sbjct: 2   SSGSSGTGEKPY-------------RCGECGKAFAQKANLTQHQRIHTGEKPSGPSS 45

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP++C  C  A  + + +  H R HTGE+P  
Sbjct: 2   SSGS-SGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSG 42

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK 216
                S + +RP++C  C + FKT +SL  H  +HTG KP    
Sbjct: 1   GSSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG +P++C  C   F T   L+ H R  HT EKP   S
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRR-SHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T ++P++C  C  A    S +  H RSHTGE+P  
Sbjct: 2   SSGS-SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSG 42

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S TG+RPY             +C  C  A  ++  L  H   HT +KP   
Sbjct: 3   SGSSGTGQRPY-------------ECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP+KC  C   FT +  L  H R  HT  KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRI-HTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 174 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
               S + E+P+KC+ C + F   + L NH   HTGVKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S TGE+PY             KC  C    +   HL +H  IHT  KP   
Sbjct: 3   SGSSGTGEKPY-------------KCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP+KC+ C     + S + NH R HTG +P  
Sbjct: 2   SSGSS-GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSG 42

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP++CK C   FT    L +H +  HT EKP   S
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKT-HTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 16/44 (36%), Positives = 21/44 (47%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK 216
                S + E+P++C VC + F   A L  H  THTG KP    
Sbjct: 1   GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S TGE+PY             +C++C  A + + HL  H   HT +KP   
Sbjct: 3   SGSSGTGEKPY-------------ECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP++C +C  A  + + +  H ++HTGE+P  
Sbjct: 2   SSGS-SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSG 42

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG K +KC  C   F+ + +L +H +  HT EKP   S
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKI-HTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 16/56 (28%), Positives = 18/56 (32%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE+ Y             KC  C    S    L  H  IHT +KP     
Sbjct: 3   SGSSGTGEKRY-------------KCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+ +KC+ C + F   + L  H   HTG KP   
Sbjct: 1   GSSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 41.4 bits (98), Expect = 8e-06
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EK +KC+ C       S++  H + HTGE+P  
Sbjct: 2   SSGSS-GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSG 42

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S +  +P+ C+ C + F   +SL  H   HTG KP   
Sbjct: 1   GSSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TGVKP+ C  C   F+    L  H    HT EKP   S
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVI-HTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 13/57 (22%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
           +   S TG +PY              C  C  A S    L +H +IHT +KP     
Sbjct: 2   SSGSSGTGVKPY-------------MCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T  KP+ C+ C  A    S +  H   HTGE+P  
Sbjct: 2   SSGS-SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSG 42

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP++CK C   F+ +  L++H R  HT EKP   S
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRV-HTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 44.4 bits (106), Expect = 7e-07
 Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE+PY             +C+ C  A S   HL  H  +HT +KP     
Sbjct: 3   SGSSGTGEKPY-------------ECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P++C  C + F     L  H   HTG KP   
Sbjct: 1   GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP++C  C  A  + + +  H R HTGE+P  
Sbjct: 2   SSGSS-GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSG 42

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP+KC  C   FT +  L RH    HT EKP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGI-HTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 17/56 (30%), Positives = 20/56 (35%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE+PY             KC  C    +   HL  H  IHT +KP     
Sbjct: 3   SGSSGTGEKPY-------------KCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P+KC+ C + F   + L  H   HTG KP   
Sbjct: 1   GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP+KC+ C     + S +  H   HTGE+P  
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG 42

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP+KC  C   F     L  H    HT EKP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVI-HTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P+KC+ C + F+  ++L  H   HTG KP   
Sbjct: 1   GSSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 5e-07
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S TGE+PY             KC  C  A  +  +L +H +IHT +KP   
Sbjct: 3   SGSSGTGEKPY-------------KCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 15/36 (41%), Positives = 19/36 (52%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP+KC+ C  A    S +  H   HTGE+P  
Sbjct: 7   GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSG 42

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.0 bits (115), Expect = 4e-08
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP+KC  C   F  +    +H R  HT ++P   S
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRL-HTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 15/57 (26%), Positives = 19/57 (33%), Gaps = 13/57 (22%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
           +   S TGE+PY             KC  C  A         H  +HT Q+P     
Sbjct: 2   SSGSSGTGEKPY-------------KCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 7e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P+KC  C + F   +S   H   HTG +P   
Sbjct: 1   GSSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP+KC  C  A  + S    H R HTG+RP  
Sbjct: 7   GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSG 42

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ +G +P KC  C   F     L  H+R  H+ EK    S
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRL-HSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S S ERP KC+ C +GF   + L  H+  H+  K    
Sbjct: 1   GSSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S +GERP+             KC  C      + HL  H+ +H+ +K    
Sbjct: 3   SGSSGSGERPF-------------KCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            + E+P KC+ C       S +  H+R H+ E+   
Sbjct: 7   GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSG 42

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP  C  C   F+    L +H R  HT EKP   S
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR-IHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 13/43 (30%), Positives = 16/43 (37%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P  C  C + F     L  H   HTG KP   
Sbjct: 1   GSSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 16/56 (28%), Positives = 19/56 (33%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE+P+              C  C  A S    L  H  IHT +KP     
Sbjct: 3   SGSSGTGEKPF-------------DCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP  C  C  A  +   +  H R HTGE+P  
Sbjct: 7   GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSG 42

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 48.0 bits (115), Expect = 4e-08
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP+ CK C   F  +  L++H R  H+ EKP   S
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRV-HSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 12/44 (27%), Positives = 19/44 (43%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK 216
                S + E+P+ C  C + F+  + L  H   H+G KP    
Sbjct: 1   GSSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 42.6 bits (101), Expect = 3e-06
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP+ C  C  +    S +  H R H+GE+P  
Sbjct: 2   SSGSS-GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSG 42

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 41.8 bits (99), Expect = 5e-06
 Identities = 13/54 (24%), Positives = 19/54 (35%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S TGE+PY              C+ C  +      L  H  +H+ +KP   
Sbjct: 3   SGSSGTGEKPY-------------NCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKC 244
           +  ++ TG+KP+ C  C   F +   L+ H R  HT E     
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR-THTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S +  +P+ C+ C + F++ + L  H  THTG      
Sbjct: 1   GSSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 13/55 (23%), Positives = 18/55 (32%), Gaps = 13/55 (23%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
           +   S TG +PY              C  C  A  S+ +L  H   HT +     
Sbjct: 2   SSGSSGTGMKPY-------------VCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.2 bits (103), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T  KP+ C+ C  A    S +  H R+HTGE    
Sbjct: 2   SSGS-SGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPS 42

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP++C  C   FT   +L  H +  HT EKP   S
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQ-IHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 5e-07
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK 216
                S + E+P++CS+C + F   + L  H   HTG KP    
Sbjct: 1   GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE+PY             +C +C  + + +  L  H  IHT +KP     
Sbjct: 3   SGSSGTGEKPY-------------ECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP++CSIC  +  + S++  H + HTGE+P  
Sbjct: 7   GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSG 42

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG + ++C  C   F     L+ H R  HT EKP   S
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQR-IHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + ER ++CS C + F   ++L  H   HTG KP   
Sbjct: 1   GSSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 16/56 (28%), Positives = 20/56 (35%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGER Y             +C  C  A + +  L  H  IHT +KP     
Sbjct: 3   SGSSGTGERHY-------------ECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T E+ ++CS C  A    S +  H R HTGE+P  
Sbjct: 7   GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSG 42

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 47.6 bits (113), Expect = 5e-08
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 177 KSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC 218
            S    +   C +C + F+ +  L  H  +H+G KP+     
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 44.5 bits (105), Expect = 7e-07
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 235 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                K   C IC     ++  +  H  SH+GE+PY 
Sbjct: 6   SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS 42

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 40.7 bits (95), Expect = 2e-05
 Identities = 13/42 (30%), Positives = 16/42 (38%)

Query: 275 KSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC 316
            S    K   CE+C        HL  H L H+ +KPY     
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 40.3 bits (94), Expect = 2e-05
 Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC 247
           +    K   C+ C   F     L RH    H+ EKP+     
Sbjct: 6   SGRTRKQVACEICGKIFRDVYHLNRHKL-SHSGEKPYSSGPS 46

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP+KC  C   F     L  H R  HT EKP   S
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRI-HTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P+KC VC + F+  +SL  H   HTG KP   
Sbjct: 1   GSSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP+KC +C  +    S +  H R HTGE+P  
Sbjct: 7   GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSG 42

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S TGE+PY             KC++C  +      L  H  IHT +KP   
Sbjct: 3   SGSSGTGEKPY-------------KCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP+KC  C   F     L  H    H+ EKP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQA-THSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P+KC+ C + F+  +SL  H  TH+G KP   
Sbjct: 1   GSSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP+KC+ C  A    S +  H  +H+GE+P  
Sbjct: 2   SSGS-SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSG 42

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S TGE+PY             KC  C  A  ++  L  H   H+ +KP   
Sbjct: 3   SGSSGTGEKPY-------------KCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG KP+KC  C   F  +  L RH R  HT EKP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRI-HTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 174 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
               S + E+P+KC+ C + F+  + L  H   HTG KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 16/57 (28%), Positives = 20/57 (35%), Gaps = 13/57 (22%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
           +   S TGE+PY             KC  C        +L  H  IHT +KP     
Sbjct: 2   SSGSSGTGEKPY-------------KCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP+KC+ C       S +  H R HTGE+P  
Sbjct: 2   SSGSS-GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSG 42

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP+KC  C   FT +  L RH    HT EKP   S
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGI-HTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 16/56 (28%), Positives = 20/56 (35%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TG++PY             KC  C    +   HL  H  IHT +KP     
Sbjct: 3   SGSSGTGKKPY-------------KCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + ++P+KC+ C + F   + L  H   HTG KP   
Sbjct: 1   GSSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T +KP+KC+ C     + S +  H   HTGE+P  
Sbjct: 7   GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG 42

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP++C  C   F+    L  H R  H+ +KP   S
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRI-HSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P++CSVC + F    SL  H   H+G KP   
Sbjct: 1   GSSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 5e-07
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE+PY             +C +C  A S ++ L  H  IH+ +KP     
Sbjct: 3   SGSSGTGEKPY-------------ECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS 45

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP++CS+C  A      +  H R H+G++P  
Sbjct: 7   GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSG 42

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP+ C  C   F     L RH R  HT EKP   S
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRI-HTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 5e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P+ C+ C + F   + L  H   HTG KP   
Sbjct: 1   GSSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S TGE+PY              C  C  +   + HL  H  IHT +KP   
Sbjct: 3   SGSSGTGEKPY-------------ICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 7e-06
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP+ C+ C  + ++ S +  H R HTGE+P  
Sbjct: 7   GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSG 42

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP++C  C   F+    L  H    HT +KP   S
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAI-HTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK 216
                S + E+P++C+ C + F   +SL  H   HTG KP    
Sbjct: 1   GSSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE+PY             +C  C  A S +  L +H  IHT +KP     
Sbjct: 3   SGSSGTGEKPY-------------ECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
                  T EKP++C+ C  A    S +  H   HTG++P  
Sbjct: 2   SSGS-SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSG 42

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG KP++C  C   F+    L +H R  H+ EKP   S
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRV-HSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGE+PY             +C++C  A S    L  H  +H+ +KP     
Sbjct: 3   SGSSGTGEKPY-------------ECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 8e-07
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P++C VC + F   ASL  H   H+G KP   
Sbjct: 1   GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP++C +C  A    + +  H R H+GE+P  
Sbjct: 7   GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSG 42

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
           +  ++ TG K  +C  C   FT    L  H +  HT EKP   S
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQK-IHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 9e-07
 Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 13/57 (22%)

Query: 259 NHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
           +   S TG + +             +C  C  A + +  L  H  IHT +KP     
Sbjct: 2   SSGSSGTGGKHF-------------ECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S +  +  +C+ C + F   ++L  H   HTG KP   
Sbjct: 1   GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T  K  +C+ C  A    S +  H + HTGE+P  
Sbjct: 7   GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSG 42

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ +G KP+ C  C   F+    L  H R  HT EKP   S
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQR-THTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
              S S E+P+ C+ C + F   + L  H  THTG KP   
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 14/54 (25%), Positives = 19/54 (35%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S +GE+PY              C  C    S +  L +H   HT +KP   
Sbjct: 3   SGSSGSGEKPY-------------GCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            + EKP+ C+ C     + S +  H R+HTGE+P  
Sbjct: 7   GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSG 42

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 47.7 bits (113), Expect = 9e-08
 Identities = 14/73 (19%), Positives = 22/73 (30%), Gaps = 8/73 (10%)

Query: 198 ASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKM 257
            S       H G +  KC  C   F     L R         K   C  C   S + + +
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR--------KTPMCEKCRKDSCQEAAL 55

Query: 258 RNHMRSHTGERPY 270
                + +G++  
Sbjct: 56  NKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 43.5 bits (102), Expect = 3e-06
 Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 8/71 (11%)

Query: 172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 231
             +  K H  +R  KCS C   F          +T +  K   C+ C         L + 
Sbjct: 6   SGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNKD 58

Query: 232 VRYKHTHEKPH 242
                + +K  
Sbjct: 59  EG-NESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.5 bits (89), Expect = 2e-04
 Identities = 13/88 (14%), Positives = 25/88 (28%), Gaps = 21/88 (23%)

Query: 224 TSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCW 283
           +SG   +  +  H  ++  KCS C         +     + +  +               
Sbjct: 2   SSGSSGKRQKI-HLGDRSQKCSKC-------GIIFIRRSTLSRRKTPM------------ 41

Query: 284 KCELCPYASSSQRHLESHMLIHTDQKPY 311
            CE C   S  +  L       + +K  
Sbjct: 42  -CEKCRKDSCQEAALNKDEGNESGKKTS 68

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKC 244
             ++ TG KP++C  C+  F T   L+ H R  HT E     
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQR-THTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S + E+P++C+ C++ F T ++L  H  THTG      
Sbjct: 1   GSSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.2 bits (103), Expect = 2e-06
 Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S TGE+PY             +C  C  A +++ +L  H   HT +     
Sbjct: 3   SGSSGTGEKPY-------------ECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T EKP++C+ C  A    S +  H R+HTGE    
Sbjct: 7   GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPS 42

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ TG + ++C  C   F     L  H R  H  EKP   S
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRI-HRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 15/56 (26%), Positives = 18/56 (32%), Gaps = 13/56 (23%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH 315
              S TGER Y             +C  C  A   +  L  H  IH  +KP     
Sbjct: 3   SGSSGTGERHY-------------ECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
              S + ER ++CS C + F   ++L  H   H G KP   
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T E+ ++CS C  A ++ S +  H R H GE+P  
Sbjct: 7   GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSG 42

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 1/40 (2%)

Query: 205 NTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKC 244
           +  +G  P++C  C   F    +L+ H R  H  E     
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQR-THAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 177 KSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
              S E P++CS C + F     L +H  TH G      
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            + E P++CS C  A     ++ +H R+H GE    
Sbjct: 5   SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPS 40

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 11/52 (21%), Positives = 16/52 (30%), Gaps = 13/52 (25%)

Query: 262 RSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              +GE PY             +C  C  A + +  L SH   H  +     
Sbjct: 3   SGSSGENPY-------------ECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKC 244
             ++ TG  P++C  C   F+   +LV H +  H+ +     
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKT-HSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
              S + E P++C  C + F     L +H  TH+G      
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ 271
            T E P++C  C        ++ +H ++H+G+    
Sbjct: 7   GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPS 42

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 14/54 (25%), Positives = 17/54 (31%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S TGE PY             +C  C    S +  L SH   H+ Q     
Sbjct: 3   SGSSGTGENPY-------------ECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.9 bits (107), Expect = 4e-07
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS 245
             ++ +G K H C  C   F     L  H R  H  EK    S
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRV-HMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 7e-07
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 215
                S S E+ H C  C + F  I++L+ H   H G K    
Sbjct: 1   GSSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 8e-06
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY 270
            + EK H C  C      +S +R H R H GE+  
Sbjct: 7   GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.1 bits (105), Expect = 9e-07
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPH 242
              +  G KP++C  C   F+  G L+ H+R  HT   P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR-VHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY 270
              EKP++C  C  A  +   +  H+R HTG  P 
Sbjct: 6   SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 13/52 (25%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPY 311
              S  GE+PY             +C+ C  A S +  L  H+ +HT   P 
Sbjct: 2   SSGSSGGEKPY-------------RCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.9 bits (94), Expect = 2e-05
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPH 213
              S   E+P++C  C + F    SL  HI  HTG  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.1 bits (103), Expect = 4e-06
 Identities = 17/81 (20%), Positives = 22/81 (27%), Gaps = 3/81 (3%)

Query: 159 CNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC 218
           C  CN           H +         C  C   F +    Q H  +    K   C  C
Sbjct: 19  CRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEH-ESKCEYKKLTCLEC 75

Query: 219 ESRFTTSGELVRHVRYKHTHE 239
              F +S  + RH    H   
Sbjct: 76  MRTFKSSFSIWRHQVEVHNQN 96

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 41.5 bits (98), Expect = 8e-06
 Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 1/41 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHK 243
              +  G  P+ C  C   FT  G L  H R   +   P  
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRS-CSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 8/35 (22%), Positives = 13/35 (37%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY 270
              E P+ C  C  +  +   +  H RS +   P 
Sbjct: 6   SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 38.8 bits (91), Expect = 6e-05
 Identities = 10/40 (25%), Positives = 14/40 (35%)

Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHK 214
              S   E P+ C  C + F    SL  H  + +   P  
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.5 bits (85), Expect = 5e-04
 Identities = 10/52 (19%), Positives = 14/52 (26%), Gaps = 13/52 (25%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPY 311
              S  GE PY              C  C  + + +  L  H    +   P 
Sbjct: 2   SSGSSGGETPY-------------LCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKC 244
             ++ T  K + C  C   FT    L RH +  HT +     
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKI-HTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 12/54 (22%), Positives = 15/54 (27%), Gaps = 13/54 (24%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC 313
              S T  + Y              C  C  A +   HL  H  IHT +     
Sbjct: 3   SGSSGTDSKSY-------------NCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 39.9 bits (94), Expect = 2e-05
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 211 KPHKCKY--CESRFTTSGELVRHVRYKHTHEK 240
           +P  C +  C  RFT S EL RH R  HT EK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKR-THTGEK 31

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 42.1 bits (98), Expect = 2e-05
 Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 199 SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTH---EKPHKCSICDYASVELS 255
              ++         ++CKYC  +         HV  +H +      + C  C++ +    
Sbjct: 5   HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64

Query: 256 KMRNH-MRSHTGERPYQLHCKSHEGE 280
            +  H ++ H GE  ++L       +
Sbjct: 65  ALSEHNLKYHPGEENFKLTMVKRNNQ 90

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 40.5 bits (94), Expect = 6e-05
 Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 4/77 (5%)

Query: 174 RHLKSHSEERPHKCSVCERGFKTIASLQNHINT-HTGVK---PHKCKYCESRFTTSGELV 229
            + ++   E  ++C  C      +     H+++ H  V     + C  C         L 
Sbjct: 8   HNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALS 67

Query: 230 RHVRYKHTHEKPHKCSI 246
            H    H  E+  K ++
Sbjct: 68  EHNLKYHPGEENFKLTM 84

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 39.9 bits (94), Expect = 2e-05
 Identities = 8/35 (22%), Positives = 16/35 (45%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY 270
            + ++ ++C  C  +  +   +  H R HTG  P 
Sbjct: 5   SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 39.1 bits (92), Expect = 4e-05
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 205 NTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPH 242
           +  +G + ++C+ C   F   G L  H R  HT   P 
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERI-HTGSGPS 39

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 42.2 bits (98), Expect = 3e-05
 Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 7/98 (7%)

Query: 171 LLARHLKSHSEERPHKCSV----CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSG 226
           L   H  +  ++R  +  V            +S    +     +    C  C   F++S 
Sbjct: 29  LKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSV 88

Query: 227 ELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSH 264
            L +H+RY    E    C +C           +H+   
Sbjct: 89  SLKQHIRY---TEHTKVCPVCKKEFTSTDSALDHVCKK 123

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 39.2 bits (92), Expect = 4e-05
 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 3/36 (8%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTH 238
                TG+KP +C  C+  F+ S  L  H +    H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRK---RH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 36.2 bits (84), Expect = 5e-04
 Identities = 12/46 (26%), Positives = 15/46 (32%), Gaps = 13/46 (28%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIH 305
             R  TG +P+Q             C  C  + S   HL  H   H
Sbjct: 2   STRGSTGIKPFQ-------------CPDCDRSFSRSDHLALHRKRH 34

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.1 bits (91), Expect = 5e-05
 Identities = 13/41 (31%), Positives = 15/41 (36%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPH 213
                S + E P KCS C+R F     L  H  TH      
Sbjct: 1   GSSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.1 bits (86), Expect = 3e-04
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERP 269
              E P KCS CD    + + +  H R+H  +  
Sbjct: 7   GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 36.0 bits (83), Expect = 6e-04
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPH 242
           +  ++  G  P KC  C+  FT    LV+H R  H  +   
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER-THARKSGP 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.8 bits (91), Expect = 5e-05
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKC 244
             +G KP+ C  C+  F+ +  LV+H +  HT +     
Sbjct: 4   GSSGEKPYSCAECKETFSDNNRLVQHQKM-HTVKSGPSS 41

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 36

 Score = 37.9 bits (87), Expect = 1e-04
 Identities = 14/32 (43%), Positives = 20/32 (62%)

Query: 237 THEKPHKCSICDYASVELSKMRNHMRSHTGER 268
           +  KP+KC  C YAS   + +  H+R HTGE+
Sbjct: 5   SSGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 42.9 bits (100), Expect = 1e-04
 Identities = 17/205 (8%), Positives = 47/205 (22%), Gaps = 27/205 (13%)

Query: 10  DLNSSEYQTVTIVPSEGSTGEVSYVLIVQQNETEPGQISVEQDIN-------PDPEHVEM 62
               S+  +  +   + +    +       N  +         +           ++ + 
Sbjct: 19  STERSDDGSSQLRDKQNNKAGPATTEPGTSNREQYRARPGIASVQRATESAELPMKNNDE 78

Query: 63  KKPQPRPKPKPLSKKLTKSEEEDLTVYDFEEVDEVDPIGEEAPSSEEEDLTVYDFEEVDE 122
             P  +   +          +++      ++  + D    +   S+       +      
Sbjct: 79  GTPDKKGNTRGDLVNEHSEAKDEADEATQKQAKDTDKSKAQVTYSDTGINNANELSRSGN 138

Query: 123 VDPIGEEAPSTIEEDVDEKPKLSKLNKKQVVAPAHMCNYCNYTSPKRYLLARHLKSHSEE 182
           VD  G      +   + E            V                        + S  
Sbjct: 139 VDNEGGSNQKPMSTRIAEATSAIVSKHPARVG--------------------LPPTASSG 178

Query: 183 RPHKCSVCERGFKTIASLQNHINTH 207
             ++C VC     +   L  H+ +H
Sbjct: 179 HGYQCHVCSAVLFSPLDLDAHVASH 203

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 35.8 bits (83), Expect = 6e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 183 RPHKCSVCERGFKTIASLQNHINTHTGVK 211
           R   C VC R F     L+ H  +HT  K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	330
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.98
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.95
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.94
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.93
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.92
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.92
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.9
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.9
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.84
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.83
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.83
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.83
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.82
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.81
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.8
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.79
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.79
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.79
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.77
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.77
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.77
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.77
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.77
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.74
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.73
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.73
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.72
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.72
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.71
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.71
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.71
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.69
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.68
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.67
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.67
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.66
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.65
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.65
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.65
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.65
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.64
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.63
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.61
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.6
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.58
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.58
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.57
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.57
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.57
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.56
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.56
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.56
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.55
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.55
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.55
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.53
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.51
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.51
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.51
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.5
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.5
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.49
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.48
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.48
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.47
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.44
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.44
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.44
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.43
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.43
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.43
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.43
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.43
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.43
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.42
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.42
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.42
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.42
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.42
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.42
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.41
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.41
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.41
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.4
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.4
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.4
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.38
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.38
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.37
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.37
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.34
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.34
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.34
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.32
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.31
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.31
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.29
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.29
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.29
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.28
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.28
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.28
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.27
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.27
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.26
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.25
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.24
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.24
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.24
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.24
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.23
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.23
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.22
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.22
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.22
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.21
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.2
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.2
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.18
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.18
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.16
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.15
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.14
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.1
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.1
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.06
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.03
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.02
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.01
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.01
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.0
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.99
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.97
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.96
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.94
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.93
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.93
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.91
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.9
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.9
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.86
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.84
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.8
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.77
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.76
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.76
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.7
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.69
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.68
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.67
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.66
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.64
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.62
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.62
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.61
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.59
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.57
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.56
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.55
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.53
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.51
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.51
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.5
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.5
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.5
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.5
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.87
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.48
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.46
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.82
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.44
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.44
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.4
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.37
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.37
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.37
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.34
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.69
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.32
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.3
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.29
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.28
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.25
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.25
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.24
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.23
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.55
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.21
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.2
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.51
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.19
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.17
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.14
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.35
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.05
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.89
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.72
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.55
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.42
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.18
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.14
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.02
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.92
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.18
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.14
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.47
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.12
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.0
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	92.25
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	91.97
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	91.32
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	90.88
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	88.38
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	87.94
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	87.22
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	86.98
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	86.91
2dkt_A	143	Ring finger and CHY zinc finger domain- containing	86.77
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	85.84
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	85.81
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	84.67
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	84.66
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	83.78
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	83.4
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	83.32
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	83.16
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	83.04
2kdx_A	119	HYPA, hydrogenase/urease nickel incorporation prot	83.0
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	82.46
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	81.2
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	80.77
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	80.47

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=3e-37  Score=253.61  Aligned_cols=163  Identities=34%  Similarity=0.636  Sum_probs=143.3

Q ss_pred             CCcccccccCcccCChhHHHHHHhhhCCCCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHh
Q psy9959         154 APAHMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVR  233 (330)
Q Consensus       154 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  233 (330)
                      ..+|.|+.|++.|.....|..|++.|.+.++|.|..|++.|.+...|..|++.|+++++|.|..|++.|.+...|..|++
T Consensus        19 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   98 (190)
T 2i13_A           19 EKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR   98 (190)
T ss_dssp             ------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH
T ss_pred             CCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHH
Confidence            34599999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccc
Q psy9959         234 YKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC  313 (330)
Q Consensus       234 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C  313 (330)
                      . |.++++|.|..|++.|.+...|..|+++|+++++             |.|.+|++.|.+...|..|+++|++++||.|
T Consensus        99 ~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-------------~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  164 (190)
T 2i13_A           99 T-HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKP-------------YKCPECGKSFSREDNLHTHQRTHTGEKPYKC  164 (190)
T ss_dssp             H-HHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCC-------------EECTTTCCEESCHHHHHHHHHHHHCCCCEEC
T ss_pred             h-cCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCC-------------eECCCCCcccCCHHHHHHHHHhcCCCCCeEC
Confidence            6 8889999999999999999999999999988877             5799999999999999999999999999999


Q ss_pred             ccCChhhHhhhhHhhcC
Q psy9959         314 DHCDQIRILICVIIAIR  330 (330)
Q Consensus       314 ~~C~~~f~~~~~l~~H~  330 (330)
                      +.||+.|.....|.+|.
T Consensus       165 ~~C~~~f~~~~~L~~H~  181 (190)
T 2i13_A          165 PECGKSFSRRDALNVHQ  181 (190)
T ss_dssp             TTTCCEESSHHHHHHHH
T ss_pred             CCCCCccCCHHHHHHHH
Confidence            99999999999999983

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=1.9e-33  Score=230.86  Aligned_cols=162  Identities=29%  Similarity=0.529  Sum_probs=151.0

Q ss_pred             CCCcccc--cccCcccCChhHHHHHHhhhCCCCCeee--ccCcccccchhhhhhccccccCcCceecC--ccccccCChH
Q psy9959         153 VAPAHMC--NYCNYTSPKRYLLARHLKSHSEERPHKC--SVCERGFKTIASLQNHINTHTGVKPHKCK--YCESRFTTSG  226 (330)
Q Consensus       153 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~  226 (330)
                      ....|.|  ..|++.|.....|..|++.|.+.++|.|  ..|++.|.+...|..|+++|+++++|.|.  .|++.|.+..
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   88 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKA   88 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHH
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHH
Confidence            3445899  6899999999999999999999999999  88999999999999999999999999999  8999999999


Q ss_pred             HHHHHHhhhc-CCCCCccc--cccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCC--CccccCChHHHHHH
Q psy9959         227 ELVRHVRYKH-THEKPHKC--SICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL--CPYASSSQRHLESH  301 (330)
Q Consensus       227 ~l~~H~~~~H-~~~~~~~C--~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~--C~~~F~~~~~L~~H  301 (330)
                      .|..|++..| .+.++|.|  ..|++.|.+...|..|+++|++++|             |.|++  |+++|.+...|..|
T Consensus        89 ~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-------------~~C~~~~C~k~F~~~~~L~~H  155 (190)
T 1tf6_A           89 NMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLP-------------YECPHEGCDKRFSLPSRLKRH  155 (190)
T ss_dssp             HHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCS-------------SBCCSSSCCCBCSSHHHHHHH
T ss_pred             HHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCC-------------ccCCCCCCCchhcCHHHHHHH
Confidence            9999995567 57889999  8899999999999999999988776             57988  99999999999999


Q ss_pred             HHHcCCCCCccccc---CChhhHhhhhHhhcC
Q psy9959         302 MLIHTDQKPYLCDH---CDQIRILICVIIAIR  330 (330)
Q Consensus       302 ~~~H~~~~p~~C~~---C~~~f~~~~~l~~H~  330 (330)
                      +++|++   |.|+.   |++.|.....|.+|.
T Consensus       156 ~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~  184 (190)
T 1tf6_A          156 EKVHAG---YPCKKDDSCSFVGKTWTLYLKHV  184 (190)
T ss_dssp             HTSSCS---CCCCSTTTCCCCCSCHHHHHHHH
T ss_pred             HHHhCC---CcCCCCCcCCCccccHHHHHHHH
Confidence            999998   99999   999999999999983

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.98  E-value=1.1e-32  Score=226.24  Aligned_cols=144  Identities=35%  Similarity=0.632  Sum_probs=132.4

Q ss_pred             CCcccccccCcccCChhHHHHHHhhhCCCCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHh
Q psy9959         154 APAHMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVR  233 (330)
Q Consensus       154 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  233 (330)
                      ..+|.|..|++.|.....|..|++.|.+.++|.|..|++.|.+...|..|++.|+++++|.|..|++.|.+...|..|++
T Consensus        47 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  126 (190)
T 2i13_A           47 EKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR  126 (190)
T ss_dssp             -CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH
Confidence            45699999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCc
Q psy9959         234 YKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPY  311 (330)
Q Consensus       234 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~  311 (330)
                      . |.++++|.|+.|++.|.+...|..|+++|+++++             |.|++|++.|.+...|..|+++|+|++||
T Consensus       127 ~-h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~-------------~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          127 T-HTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKP-------------YKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             H-HHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC-------------EECTTTCCEESSHHHHHHHHTTC------
T ss_pred             H-hCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC-------------eECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            6 8899999999999999999999999999998877             57999999999999999999999999987

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=2.4e-28  Score=193.62  Aligned_cols=138  Identities=30%  Similarity=0.547  Sum_probs=127.7

Q ss_pred             cccccccCcccCChhHHHHHHh---hhCCCCCeeeccC-----cccccchhhhhhccccccCcCceecCc--cccccCCh
Q psy9959         156 AHMCNYCNYTSPKRYLLARHLK---SHSEERPHKCSVC-----ERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTS  225 (330)
Q Consensus       156 ~~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~  225 (330)
                      .|.|..|++.|.+...|..|++   .|.+.++|.|.+|     ++.|.+...|..|++.|+++++|.|.+  |++.|.+.
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   82 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRL   82 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSH
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCH
Confidence            4889999999999999999998   6788899998753     499999999999999999999999986  99999999


Q ss_pred             HHHHHHHhhhcCCCCCccccc--cCccccCHHHHHHHH-HHhcCCCCceeeecccCCCCccccCC--CccccCChHHHHH
Q psy9959         226 GELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHM-RSHTGERPYQLHCKSHEGEKCWKCEL--CPYASSSQRHLES  300 (330)
Q Consensus       226 ~~l~~H~~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~-~~h~~~~~~~~h~~~~~~~k~~~C~~--C~~~F~~~~~L~~  300 (330)
                      ..|..|++. |.++++|.|+.  |++.|.+...|..|+ +.|.++++             |.|.+  |++.|.+...|..
T Consensus        83 ~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~-------------~~C~~~~C~~~f~~~~~L~~  148 (155)
T 2gli_A           83 ENLKTHLRS-HTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKP-------------YVCKLPGCTKRYTDPSSLRK  148 (155)
T ss_dssp             HHHHHHHHH-TTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCC-------------EECCSTTTCCEESSHHHHHH
T ss_pred             HHHHHHHHH-cCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCC-------------eeCCCCCCccccCCHHHHHH
Confidence            999999996 99999999998  999999999999999 77877666             57998  9999999999999


Q ss_pred             HHHHcCC
Q psy9959         301 HMLIHTD  307 (330)
Q Consensus       301 H~~~H~~  307 (330)
                      |+++|+|
T Consensus       149 H~~~hhg  155 (155)
T 2gli_A          149 HVKTVHG  155 (155)
T ss_dssp             HHHHSCC
T ss_pred             HHHhhcC
Confidence            9999986

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=5.5e-28  Score=191.56  Aligned_cols=134  Identities=33%  Similarity=0.596  Sum_probs=124.3

Q ss_pred             CCeeeccCcccccchhhhhhccc---cccCcCceecCcc-----ccccCChHHHHHHHhhhcCCCCCccccc--cCcccc
Q psy9959         183 RPHKCSVCERGFKTIASLQNHIN---THTGVKPHKCKYC-----ESRFTTSGELVRHVRYKHTHEKPHKCSI--CDYASV  252 (330)
Q Consensus       183 ~~~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~C-----~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~k~f~  252 (330)
                      .+|.|..|++.|.+...|..|++   .|.+.++|.|.+|     ++.|.+...|..|++. |.++++|.|..  |++.|.
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR-HTGEKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHH-HHCCCCCCCCSTTCCCCCS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHh-cCCCCCccCCCCCCCCccc
Confidence            57899999999999999999998   7889999998753     4999999999999996 88999999986  999999


Q ss_pred             CHHHHHHHHHHhcCCCCceeeecccCCCCccccCC--CccccCChHHHHHHH-HHcCCCCCccccc--CChhhHhhhhHh
Q psy9959         253 ELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL--CPYASSSQRHLESHM-LIHTDQKPYLCDH--CDQIRILICVII  327 (330)
Q Consensus       253 ~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~--C~~~F~~~~~L~~H~-~~H~~~~p~~C~~--C~~~f~~~~~l~  327 (330)
                      +...|..|+++|+++++             |.|++  |++.|.+...|..|+ ++|++++||.|+.  ||+.|.....|.
T Consensus        81 ~~~~l~~H~~~h~~~~~-------------~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~  147 (155)
T 2gli_A           81 RLENLKTHLRSHTGEKP-------------YMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLR  147 (155)
T ss_dssp             SHHHHHHHHHHTTTCCC-------------EECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHH
T ss_pred             CHHHHHHHHHHcCCCCC-------------eeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHH
Confidence            99999999999988776             57998  999999999999999 8999999999988  999999999999


Q ss_pred             hcC
Q psy9959         328 AIR  330 (330)
Q Consensus       328 ~H~  330 (330)
                      +|.
T Consensus       148 ~H~  150 (155)
T 2gli_A          148 KHV  150 (155)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            983

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.95  E-value=2.4e-27  Score=194.34  Aligned_cols=138  Identities=23%  Similarity=0.460  Sum_probs=127.7

Q ss_pred             CCcccc--cccCcccCChhHHHHHHhhhCCCCCeeec--cCcccccchhhhhhcc-ccc-cCcCceec--CccccccCCh
Q psy9959         154 APAHMC--NYCNYTSPKRYLLARHLKSHSEERPHKCS--VCERGFKTIASLQNHI-NTH-TGVKPHKC--KYCESRFTTS  225 (330)
Q Consensus       154 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~  225 (330)
                      ..+|.|  ..|++.|.....|..|++.|.+.++|.|.  .|++.|.+...|..|+ +.| .+.++|.|  ..|++.|.+.
T Consensus        40 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~  119 (190)
T 1tf6_A           40 EKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKH  119 (190)
T ss_dssp             CCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSH
T ss_pred             CCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCH
Confidence            445899  88999999999999999999999999999  8999999999999999 667 46789999  8999999999


Q ss_pred             HHHHHHHhhhcCCCCCccccc--cCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCC---CccccCChHHHHH
Q psy9959         226 GELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL---CPYASSSQRHLES  300 (330)
Q Consensus       226 ~~l~~H~~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~---C~~~F~~~~~L~~  300 (330)
                      ..|..|++. |+++++|.|+.  |++.|.+...|..|+++|++                |.|..   |++.|.+...|..
T Consensus       120 ~~L~~H~~~-H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~----------------~~C~~~~~C~~~f~~~~~l~~  182 (190)
T 1tf6_A          120 NQLKVHQFS-HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----------------YPCKKDDSCSFVGKTWTLYLK  182 (190)
T ss_dssp             HHHHHHHGG-GSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS----------------CCCCSTTTCCCCCSCHHHHHH
T ss_pred             HHHHHHHHH-hCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC----------------CcCCCCCcCCCccccHHHHHH
Confidence            999999996 99999999988  99999999999999999876                46999   9999999999999


Q ss_pred             HHHHcCCC
Q psy9959         301 HMLIHTDQ  308 (330)
Q Consensus       301 H~~~H~~~  308 (330)
                      |+++|+++
T Consensus       183 H~~~h~~e  190 (190)
T 1tf6_A          183 HVAECHQD  190 (190)
T ss_dssp             HHTTCC--
T ss_pred             HHHhhcCC
Confidence            99999874

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.94  E-value=1.4e-27  Score=183.39  Aligned_cols=117  Identities=22%  Similarity=0.322  Sum_probs=96.0

Q ss_pred             hhhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCC
Q psy9959         200 LQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEG  279 (330)
Q Consensus       200 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~  279 (330)
                      +..|.++|.|+++|.|.+|++.|.....|..|+++ |+++++|.|..|++.|.....|..|+++|++++|          
T Consensus        10 ~~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~----------   78 (133)
T 2lt7_A           10 DDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNI-HSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERR----------   78 (133)
T ss_dssp             SSEEEEEETTEEEEEETTTCCEESCHHHHHHHHHH-HHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCC----------
T ss_pred             HhhceeecCCCcCeECCCCCCCcCCHHHHHHHHHH-cCCCCCeeCCccCeecccccchhhhccccCCCcc----------
Confidence            44556678888889999999999999899999885 8888889999999999999999999888887766          


Q ss_pred             CCccccCCCccccCChHHHHHHHHHcCCCC------CcccccCChhhHhhhhHhhcC
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHTDQK------PYLCDHCDQIRILICVIIAIR  330 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~------p~~C~~C~~~f~~~~~l~~H~  330 (330)
                         |.|++||++|.+.+.|..|+++|++++      +|.|..|++.|........+|
T Consensus        79 ---~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~~h~~ek  132 (133)
T 2lt7_A           79 ---YQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAYLSDR  132 (133)
T ss_dssp             ---EEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCCHHHHCC
T ss_pred             ---ccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhcccccccC
Confidence               469999999999999999988887764      478888988887776655443

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.93  E-value=3.9e-27  Score=180.88  Aligned_cols=114  Identities=25%  Similarity=0.415  Sum_probs=105.7

Q ss_pred             HHHhhhCCCCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccC
Q psy9959         174 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVE  253 (330)
Q Consensus       174 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~  253 (330)
                      .|.++|.|+++|.|.+|++.|.+...|..|+++|+++++|.|..|++.|.+...|..|+++ |++++||.|+.||+.|..
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIH-HTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHH-HHTCCCEEESSSCCEESS
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccc-cCCCccccCCCCCCCcCC
Confidence            3456688999999999999999999999999999999999999999999999999999996 999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCCh
Q psy9959         254 LSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQ  295 (330)
Q Consensus       254 ~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~  295 (330)
                      ...|..|+++|++++|+       ...++|+|..|++.|...
T Consensus        91 ~~~L~~H~~~hh~~~p~-------~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQDPS-------GDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHHHTCCCTT-------SSSCCEEECCCCSSCCCC
T ss_pred             HHHHHHHhHHhcCCCCC-------CCCCCeecCCCCchhhhc
Confidence            99999999999999885       356789999999998754

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=2.7e-25  Score=169.12  Aligned_cols=117  Identities=31%  Similarity=0.594  Sum_probs=100.4

Q ss_pred             CCCCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhh--cCCCCCccccccCccccCHHHH
Q psy9959         180 SEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYK--HTHEKPHKCSICDYASVELSKM  257 (330)
Q Consensus       180 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~--H~~~~~~~C~~C~k~f~~~~~L  257 (330)
                      .+.++|.|..|++.|.+...|..|++.|+++++|.|..|++.|.+...|..|++.+  |.+.++|.|..|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            35678888888888888888888888888888899999999999999999998853  5678899999999999999999


Q ss_pred             HHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHH-HcCCCC
Q psy9959         258 RNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHML-IHTDQK  309 (330)
Q Consensus       258 ~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~~  309 (330)
                      ..|+++|++++|             |.|.+|++.|.+...|..|++ .|.++.
T Consensus        83 ~~H~~~h~~~~~-------------~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           83 RLHMVSHTGEMP-------------YKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHHSSSCS-------------EECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHHcCCCCC-------------ccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            999999988776             569999999999999999997 466543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.92  E-value=1.8e-25  Score=170.25  Aligned_cols=116  Identities=34%  Similarity=0.647  Sum_probs=98.1

Q ss_pred             CCCeeec--cCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc--cCccccCHHHH
Q psy9959         182 ERPHKCS--VCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI--CDYASVELSKM  257 (330)
Q Consensus       182 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~k~f~~~~~L  257 (330)
                      .++|.|+  .|++.|.+...|..|++.| +.++|.|..|++.|.+...|..|++. |.++++|.|..  |++.|.+...|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLV-HTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGG-TSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHH-cCCCCCeeCCCCCCcCccCCHHHH
Confidence            4678998  8999999999999999988 78899999999999999999999985 88899999986  99999999999


Q ss_pred             HHHHHHhcCCCCceeeecccCCCCccccC--CCccccCChHHHHHHHHHcCCCCCcc
Q psy9959         258 RNHMRSHTGERPYQLHCKSHEGEKCWKCE--LCPYASSSQRHLESHMLIHTDQKPYL  312 (330)
Q Consensus       258 ~~H~~~h~~~~~~~~h~~~~~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~p~~  312 (330)
                      ..|+++|+++++             |.|+  .|++.|.+...|..|+++|+++++|+
T Consensus        81 ~~H~~~h~~~~~-------------~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           81 RTHVRIHTGDRP-------------YVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHHHHHCCCC-------------CCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHHHhCCCCc-------------eECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            999999988776             5696  49999999999999999999988864

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=3e-25  Score=168.82  Aligned_cols=111  Identities=25%  Similarity=0.473  Sum_probs=102.5

Q ss_pred             cCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCC
Q psy9959         208 TGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL  287 (330)
Q Consensus       208 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~  287 (330)
                      ++.++|.|..|++.|.+...|..|++. |.++++|.|..|++.|.+...|..|++.|+.          +.+.++|.|.+
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~----------~~~~~~~~C~~   71 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRK-HTGEKPFECPKCGKCYFRKENLLEHEARNCM----------NRSEQVFTCSV   71 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHH-HSSCCSCBCTTTCCBCSSHHHHHHHHHHCCC----------CSCCCCEECSS
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHh-CCCCCCeECCCCCchhcCHHHHHHHHhhhhc----------CCCCCCeECCC
Confidence            467899999999999999999999996 8899999999999999999999999997531          23455688999


Q ss_pred             CccccCChHHHHHHHHHcCCCCCcccccCChhhHhhhhHhhc
Q psy9959         288 CPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAI  329 (330)
Q Consensus       288 C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H  329 (330)
                      |++.|.+...|..|+++|++++||.|+.|++.|.....|.+|
T Consensus        72 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  113 (124)
T 2dlq_A           72 CQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH  113 (124)
T ss_dssp             SCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHH
Confidence            999999999999999999999999999999999999999998

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.92  E-value=1e-25  Score=178.42  Aligned_cols=125  Identities=29%  Similarity=0.494  Sum_probs=95.8

Q ss_pred             cccccccCcccCChhHHHHHHhh-hCCCCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhh
Q psy9959         156 AHMCNYCNYTSPKRYLLARHLKS-HSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRY  234 (330)
Q Consensus       156 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  234 (330)
                      .|.|..|++.|.+...|..|++. |.+..+..+..|                    ..|.|..|++.|.+...|..|++.
T Consensus        25 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~--------------------~~~~C~~C~~~f~~~~~l~~H~~~   84 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC--------------------YWEECPREGKSFKAKYKLVNHIRV   84 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCC--------------------CBTTCTTSSCCCSSHHHHHHHTHH
T ss_pred             ccccccCCcccCCHHHHHHHHHhhcCCCcccCCccc--------------------cccCCCCcccccCCHHHHHHHHHh
Confidence            35566666666666666666655 443332211111                    237899999999999999999885


Q ss_pred             hcCCCCCccccc--cCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCC--CccccCChHHHHHHHHHcCCCCC
Q psy9959         235 KHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL--CPYASSSQRHLESHMLIHTDQKP  310 (330)
Q Consensus       235 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~~p  310 (330)
                       |.++++|.|..  |++.|.....|..|+++|+++++             |.|.+  |++.|.+...|..|+++|++++|
T Consensus        85 -h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~-------------~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~  150 (155)
T 2rpc_A           85 -HTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP-------------FKCEFEGCDRRFANSSDRKKHMHVHTSDKS  150 (155)
T ss_dssp             -HHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCS-------------BCCSSTTCCCCBSSHHHHHHSSTTTTSCCC
T ss_pred             -cCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCC-------------ccCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence             78888999988  99999999999999988877766             57997  99999999999999999999999


Q ss_pred             cccc
Q psy9959         311 YLCD  314 (330)
Q Consensus       311 ~~C~  314 (330)
                      |.|.
T Consensus       151 ~~c~  154 (155)
T 2rpc_A          151 GPSS  154 (155)
T ss_dssp             SCSC
T ss_pred             CCCC
Confidence            9986

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.92  E-value=3.9e-25  Score=167.02  Aligned_cols=112  Identities=38%  Similarity=0.743  Sum_probs=99.7

Q ss_pred             CCCCCeeecc--CcccccchhhhhhccccccCcCceecC--ccccccCChHHHHHHHhhhcCCCCCccccccCccccCHH
Q psy9959         180 SEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCK--YCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELS  255 (330)
Q Consensus       180 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~  255 (330)
                      .++++|.|.+  |++.|.+...|..|++.|++.++|.|.  .|++.|.+...|..|++. |.++++|.|..|++.|.+..
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~   80 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR-HTGVKPFQCKTCQRKFSRSD   80 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHH-HHCCCCEECTTTCCEESCHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHH-cCCCCCccCCccCchhCCHH
Confidence            4577899987  999999999999999999888999998  699999999999999986 78889999999999999999


Q ss_pred             HHHHHHHHhcCCCCceeeecccCCCCcccc--CCCccccCChHHHHHHHHHc
Q psy9959         256 KMRNHMRSHTGERPYQLHCKSHEGEKCWKC--ELCPYASSSQRHLESHMLIH  305 (330)
Q Consensus       256 ~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C--~~C~~~F~~~~~L~~H~~~H  305 (330)
                      .|..|+++|+++++             |.|  +.|++.|.+...|..|+++|
T Consensus        81 ~l~~H~~~h~~~~~-------------~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           81 HLKTHTRTHTGEKP-------------FSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHTCCC-------------EECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCCC-------------eeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999988776             468  78999999999999999887

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.91  E-value=1.1e-24  Score=164.54  Aligned_cols=109  Identities=30%  Similarity=0.634  Sum_probs=102.8

Q ss_pred             cCcCceecCc--cccccCChHHHHHHHhhhcCCCCCcccc--ccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCcc
Q psy9959         208 TGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCS--ICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCW  283 (330)
Q Consensus       208 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~  283 (330)
                      +++++|.|.+  |++.|.+...|..|++. |.++++|.|.  .|++.|.+...|..|+++|+++++             |
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-------------~   67 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRK-HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP-------------F   67 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHH-HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCC-------------E
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHh-hCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCC-------------c
Confidence            5788999997  99999999999999996 8899999999  799999999999999999988777             5


Q ss_pred             ccCCCccccCChHHHHHHHHHcCCCCCccc--ccCChhhHhhhhHhhcC
Q psy9959         284 KCELCPYASSSQRHLESHMLIHTDQKPYLC--DHCDQIRILICVIIAIR  330 (330)
Q Consensus       284 ~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C--~~C~~~f~~~~~l~~H~  330 (330)
                      .|..|++.|.+...|..|+++|++++||.|  +.||+.|.....|.+|.
T Consensus        68 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~  116 (119)
T 2jp9_A           68 QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHH  116 (119)
T ss_dssp             ECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHH
T ss_pred             cCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHH
Confidence            799999999999999999999999999999  89999999999999983

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.90  E-value=1.7e-24  Score=164.70  Aligned_cols=114  Identities=28%  Similarity=0.591  Sum_probs=103.5

Q ss_pred             Cccccc--ccCcccCChhHHHHHHhhhCCCCCeeeccCcccccchhhhhhccccccCcCceecCc--cccccCChHHHHH
Q psy9959         155 PAHMCN--YCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVR  230 (330)
Q Consensus       155 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~  230 (330)
                      ..|.|+  .|++.|.+...|..|++.| +.++|.|..|++.|.+...|..|++.|+++++|.|..  |++.|.+...|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            348999  8999999999999999999 8899999999999999999999999999999999986  9999999999999


Q ss_pred             HHhhhcCCCCCcccc--ccCccccCHHHHHHHHHHhcCCCCc
Q psy9959         231 HVRYKHTHEKPHKCS--ICDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       231 H~~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      |++. |.++++|.|+  .|++.|.+...|..|+++|++++++
T Consensus        83 H~~~-h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           83 HVRI-HTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHH-HHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHH-hCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            9996 8899999996  4999999999999999999998875

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.90  E-value=1.1e-23  Score=166.79  Aligned_cols=84  Identities=39%  Similarity=0.693  Sum_probs=41.8

Q ss_pred             eeeccCcccccchhhhhhccccccCcCceecCc--cccccCChHHHHHHHhhhcCCCCCccccc--cCccccCHHHHHHH
Q psy9959         185 HKCSVCERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNH  260 (330)
Q Consensus       185 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~k~f~~~~~L~~H  260 (330)
                      |.|..|++.|.+...|..|++.|+++++|.|..  |++.|.....|.+|++. |.++++|.|..  |++.|.....|..|
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~-h~~~~~~~C~~~~C~k~f~~~~~L~~H  141 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT-HTGEKPFKCEFEGCDRRFANSSDRKKH  141 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTT-TCSSCSBCCSSTTCCCCBSSHHHHHHS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHh-hCCCCCccCCCCCCCCccCCHHHHHHH
Confidence            444444444444444545544444444555544  55555555555555543 44445555554  55555555555555


Q ss_pred             HHHhcCCCC
Q psy9959         261 MRSHTGERP  269 (330)
Q Consensus       261 ~~~h~~~~~  269 (330)
                      +++|++++|
T Consensus       142 ~~~H~~~k~  150 (155)
T 2rpc_A          142 MHVHTSDKS  150 (155)
T ss_dssp             STTTTSCCC
T ss_pred             HHHhcCCCC
Confidence            554444444

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.84  E-value=7.7e-21  Score=140.26  Aligned_cols=94  Identities=32%  Similarity=0.573  Sum_probs=77.8

Q ss_pred             ccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccC
Q psy9959         207 HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCE  286 (330)
Q Consensus       207 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~  286 (330)
                      ..+.++|.|..|++.|.....|..|++. |.++++|.|..|++.|.....|..|+++|+++++             |.|.
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-------------~~C~   77 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERT-HTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP-------------FKCQ   77 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHH-HCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCT-------------TSCS
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHH-cCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCC-------------eECC
Confidence            3456788888888888888888888885 7788888888888888888888888888776655             5688


Q ss_pred             CCccccCChHHHHHHHHHcCCCCCcccc
Q psy9959         287 LCPYASSSQRHLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       287 ~C~~~F~~~~~L~~H~~~H~~~~p~~C~  314 (330)
                      +|++.|.+...|..|+++|++++||.+.
T Consensus        78 ~C~~~f~~~~~L~~H~~~H~~~~~~~~~  105 (106)
T 2ee8_A           78 ECGKGFCQSRTLAVHKTLHMQTSSPTAA  105 (106)
T ss_dssp             SSCCCCSSHHHHHHHHHHTTSCCCCCCC
T ss_pred             CcCCcccCHHHHHHHHHHhCCCCCCcCC
Confidence            8999999888999998888888888653

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.83  E-value=9.8e-22  Score=147.38  Aligned_cols=108  Identities=18%  Similarity=0.191  Sum_probs=86.7

Q ss_pred             chhhhhhccccccCcCceecCccccccCChHHHHHHHhhh-cCCCCCc-cccccCccc--cCHHHHHHHHHHhcCCCCce
Q psy9959         196 TIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYK-HTHEKPH-KCSICDYAS--VELSKMRNHMRSHTGERPYQ  271 (330)
Q Consensus       196 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~-H~~~~~~-~C~~C~k~f--~~~~~L~~H~~~h~~~~~~~  271 (330)
                      +...|..|+++|+++++|.|..|++.|.....|..|++.. |.+.+++ .|..|++.|  .....|..|+++|++++|  
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~--   80 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV--   80 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSS--
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcc--
Confidence            3456889999999999999999999999999999999841 4455554 599999988  777777777666655544  


Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                                 |.|.+|++.|.+...|..|+++|+......++..
T Consensus        81 -----------~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~~s  114 (115)
T 2dmi_A           81 -----------LKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSS  114 (115)
T ss_dssp             -----------CBCSSSCCBCSSHHHHHHHHHHTTTTTCSCCCCC
T ss_pred             -----------eECCCCCCccCCHHHHHHHHHHhCCcccCCCCCC
Confidence                       6799999999999999999999887776666544

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=7.8e-21  Score=140.51  Aligned_cols=97  Identities=13%  Similarity=0.236  Sum_probs=87.6

Q ss_pred             hhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCC
Q psy9959         201 QNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGE  280 (330)
Q Consensus       201 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~  280 (330)
                      ..+++.|+++++|.|.+|++.|.....|..|++. |  .++|.|..|++.|.....|..|++ |+++++           
T Consensus         5 ss~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~-----------   69 (107)
T 1wjp_A            5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERL-C--RNAAVCPYCSLRFFSPELKQEHES-KCEYKK-----------   69 (107)
T ss_dssp             CCCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHH-H--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGG-----------
T ss_pred             cccCcccCCCcCeECCCCCCccCCHHHHHHHHHH-C--CCCccCCCCCCccCCHHHHHHHHH-cCCCCC-----------
Confidence            3567889999999999999999999999999997 6  478999999999999999999996 887766           


Q ss_pred             CccccCCCccccCChHHHHHHHH-HcCCCCCcccc
Q psy9959         281 KCWKCELCPYASSSQRHLESHML-IHTDQKPYLCD  314 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~-~H~~~~p~~C~  314 (330)
                        |.|.+|++.|.+...|..|++ +|.++++|.|.
T Consensus        70 --~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           70 --LTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             --GEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             --ccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence              579999999999999999997 89999999885

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=2.2e-20  Score=135.17  Aligned_cols=91  Identities=41%  Similarity=0.820  Sum_probs=75.2

Q ss_pred             ccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccC
Q psy9959         207 HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCE  286 (330)
Q Consensus       207 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~  286 (330)
                      +.++++|.|..|++.|.+...|..|++. |.++++|.|..|++.|.....|..|+++|+++++             |.|.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-------------~~C~   68 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRC-HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP-------------FKCQ   68 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGG-CCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCC-------------EECS
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHh-cCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCC-------------ccCC
Confidence            4567788888888888888888888885 7788888888888888888888888888877665             4688


Q ss_pred             CCccccCChHHHHHHHHHcCCCCCc
Q psy9959         287 LCPYASSSQRHLESHMLIHTDQKPY  311 (330)
Q Consensus       287 ~C~~~F~~~~~L~~H~~~H~~~~p~  311 (330)
                      +|++.|.+...|..|+++|+++++.
T Consensus        69 ~C~~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           69 ICPYASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             SSSCEESSHHHHHHHHTTCCSCCCC
T ss_pred             CCCCccCCHHHHHHHHHHhcCCCCC
Confidence            8888888888888888888887654

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.82  E-value=2.6e-20  Score=133.12  Aligned_cols=87  Identities=37%  Similarity=0.755  Sum_probs=73.5

Q ss_pred             CcCceecC--ccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccC
Q psy9959         209 GVKPHKCK--YCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCE  286 (330)
Q Consensus       209 ~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~  286 (330)
                      |+++|.|.  .|++.|.....|..|++. |.+.++|.|..|++.|.+...|..|+++|+++++             |.|.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-------------~~C~   66 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-------------FACD   66 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHH-HHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC-------------EECT
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHH-hCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCC-------------ccCC
Confidence            45788997  599999999999999885 7788899999999999999999999999887766             4699


Q ss_pred             CCccccCChHHHHHHHHHcCCCC
Q psy9959         287 LCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       287 ~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      .|++.|.+...|..|+++|++++
T Consensus        67 ~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           67 ICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             TTCCEESSHHHHHHHHGGGGC--
T ss_pred             CCCchhCCHHHHHHHHHHhcccC
Confidence            99999999999999999998875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.81  E-value=3.6e-20  Score=136.61  Aligned_cols=88  Identities=27%  Similarity=0.492  Sum_probs=55.2

Q ss_pred             CCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHH
Q psy9959         182 ERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHM  261 (330)
Q Consensus       182 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~  261 (330)
                      .++|.|..|++.|.+...|..|++.|+++++|.|.+|++.|.....|..|++. |.++++|.|..|++.|.....|..|+
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYI-HSKEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGG-SCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHH-hCCCCCeECCCcCCcccCHHHHHHHH
Confidence            34555555555555555555555555556666666666666666666666664 66666666666666666666666666


Q ss_pred             HHhcCCCCc
Q psy9959         262 RSHTGERPY  270 (330)
Q Consensus       262 ~~h~~~~~~  270 (330)
                      ++|+++++|
T Consensus        94 ~~H~~~~~~  102 (106)
T 2ee8_A           94 TLHMQTSSP  102 (106)
T ss_dssp             HHTTSCCCC
T ss_pred             HHhCCCCCC
Confidence            666666554

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=2.8e-20  Score=134.62  Aligned_cols=90  Identities=44%  Similarity=0.853  Sum_probs=80.0

Q ss_pred             hCCCCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHH
Q psy9959         179 HSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMR  258 (330)
Q Consensus       179 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~  258 (330)
                      +.+.++|.|..|++.|.+...|..|++.|++.++|.|..|++.|.....|..|++. |.++++|.|..|++.|.....|.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI-HSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHH-SCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHH-hCCCCCccCCCCCCccCCHHHHH
Confidence            45678899999999999999999999999988999999999999999999999986 88889999999999999999999


Q ss_pred             HHHHHhcCCCC
Q psy9959         259 NHMRSHTGERP  269 (330)
Q Consensus       259 ~H~~~h~~~~~  269 (330)
                      .|+++|+++++
T Consensus        82 ~H~~~h~~~~~   92 (96)
T 2dmd_A           82 VHLRSHTGDSG   92 (96)
T ss_dssp             HHHTTCCSCCC
T ss_pred             HHHHHhcCCCC
Confidence            99999988764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.80  E-value=7.2e-20  Score=128.30  Aligned_cols=82  Identities=34%  Similarity=0.620  Sum_probs=67.9

Q ss_pred             ceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccc
Q psy9959         212 PHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYA  291 (330)
Q Consensus       212 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~  291 (330)
                      ||.|..|++.|.....|..|++. |.++++|.|..|++.|.....|..|++.|+++++             |.|..|++.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-------------~~C~~C~~~   66 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLI-HSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP-------------HKCQVCGKA   66 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH-HHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCC-------------EECTTTSCE
T ss_pred             CccCCCCcccccCchhHHHHHHH-cCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCC-------------CcCCCcchh
Confidence            57888888888888888888885 7778888888888888888888888888877766             468888888


Q ss_pred             cCChHHHHHHHHHcCC
Q psy9959         292 SSSQRHLESHMLIHTD  307 (330)
Q Consensus       292 F~~~~~L~~H~~~H~~  307 (330)
                      |.+...|..|+++|+|
T Consensus        67 f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           67 FSQSSNLITHSRKHTG   82 (82)
T ss_dssp             ESSHHHHHHHHHHHC-
T ss_pred             hCChHHHHHHHHhhCC
Confidence            8888888888888865

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=3.6e-20  Score=132.35  Aligned_cols=86  Identities=38%  Similarity=0.772  Sum_probs=73.4

Q ss_pred             CCCeeec--cCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHH
Q psy9959         182 ERPHKCS--VCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRN  259 (330)
Q Consensus       182 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~  259 (330)
                      +++|.|+  .|++.|.+...|..|++.|++.++|.|..|++.|.+...|..|++. |.++++|.|..|++.|.+...|..
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH-HHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHH-cCCCCCccCCCCCchhCCHHHHHH
Confidence            5688887  5999998888899998888888889999999999999999999885 778888999999999999999999


Q ss_pred             HHHHhcCCC
Q psy9959         260 HMRSHTGER  268 (330)
Q Consensus       260 H~~~h~~~~  268 (330)
                      |+++|++++
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            999888765

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.79  E-value=6.5e-20  Score=128.54  Aligned_cols=82  Identities=37%  Similarity=0.808  Sum_probs=70.2

Q ss_pred             CeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHH
Q psy9959         184 PHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRS  263 (330)
Q Consensus       184 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~  263 (330)
                      ||.|..|++.|.+...|..|++.|.+.++|.|..|++.|.....|..|++. |.++++|.|..|++.|.+...|..|+++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI-HTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHH-HHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHH-hcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            578888888888888888888888888888888888888888888888885 7788888999999999999999999888


Q ss_pred             hcC
Q psy9959         264 HTG  266 (330)
Q Consensus       264 h~~  266 (330)
                      |+|
T Consensus        80 H~g   82 (82)
T 2kmk_A           80 HTG   82 (82)
T ss_dssp             HC-
T ss_pred             hCC
Confidence            865

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=4.1e-19  Score=128.15  Aligned_cols=89  Identities=30%  Similarity=0.561  Sum_probs=74.5

Q ss_pred             cCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCC
Q psy9959         208 TGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL  287 (330)
Q Consensus       208 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~  287 (330)
                      .++++|.|.+|++.|.+...|..|++. |.++++|.|..|++.|.....|..|++.|+++.           .++|.|.+
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-----------~~~~~C~~   70 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLS-HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV-----------GKPYICQS   70 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHH-SCSSCSEECSSSCCEESCHHHHHHHHHHHCCCC-----------CSSBCCSS
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHh-cCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCC-----------CCceECCC
Confidence            467889999999999999999999885 888889999999999999999999999887751           13367999


Q ss_pred             CccccCChHHHHHHHH-HcCCC
Q psy9959         288 CPYASSSQRHLESHML-IHTDQ  308 (330)
Q Consensus       288 C~~~F~~~~~L~~H~~-~H~~~  308 (330)
                      |++.|.+...|..|++ +|.++
T Consensus        71 C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           71 CGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             SCCCBSSHHHHHHHHHHTSCCC
T ss_pred             ccchhCCHHHHHHHHHHhcCCC
Confidence            9999999999999985 67664

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.79  E-value=1e-20  Score=141.80  Aligned_cols=100  Identities=17%  Similarity=0.219  Sum_probs=89.4

Q ss_pred             hhHHHHHHhhhCCCCCeeeccCcccccchhhhhhcccc--ccCcCcee-cCcccccc--CChHHHHHHHhhhcCCCCCcc
Q psy9959         169 RYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINT--HTGVKPHK-CKYCESRF--TTSGELVRHVRYKHTHEKPHK  243 (330)
Q Consensus       169 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~~H~~~~~~~  243 (330)
                      ...|..|++.|.++++|.|..|++.|.+...|..|++.  |.+.+++. |..|++.|  .....|..|++. |.++++|.
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~-H~~~~~~~   82 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGK-EDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCS-CCCCSSCB
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhc-cCCCcceE
Confidence            34577799999999999999999999999999999998  77777655 99999999  889999999986 99999999


Q ss_pred             ccccCccccCHHHHHHHHHHhcCCCC
Q psy9959         244 CSICDYASVELSKMRNHMRSHTGERP  269 (330)
Q Consensus       244 C~~C~k~f~~~~~L~~H~~~h~~~~~  269 (330)
                      |..|++.|.....|..|++.|+....
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             CCCCCCccCCHHHHHHHHHHhCCccc
Confidence            99999999999999999999887654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=8.8e-20  Score=134.82  Aligned_cols=92  Identities=15%  Similarity=0.238  Sum_probs=77.0

Q ss_pred             HHhhhCCCCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCH
Q psy9959         175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVEL  254 (330)
Q Consensus       175 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~  254 (330)
                      +++.|.++++|.|..|++.|.....|..|++.|  .++|.|.+|++.|.....|..|+ . |.++++|.|..|++.|...
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~-~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHE-S-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHH-H-HCSTGGGEEGGGTEECSSH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHH-H-cCCCCCccCccccchhCCH
Confidence            345677888888888888888888888888887  36889999999999988999998 3 8888889999999999999


Q ss_pred             HHHHHHHH-HhcCCCCc
Q psy9959         255 SKMRNHMR-SHTGERPY  270 (330)
Q Consensus       255 ~~L~~H~~-~h~~~~~~  270 (330)
                      ..|..|++ .|.++++|
T Consensus        83 ~~L~~H~~~~H~~~~~~   99 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMA   99 (107)
T ss_dssp             HHHHHHHHHTSCCCCCC
T ss_pred             HHHHHHHHHHcCCCCCC
Confidence            99999987 77777665

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=2.6e-19  Score=132.96  Aligned_cols=87  Identities=25%  Similarity=0.501  Sum_probs=77.9

Q ss_pred             cccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCcccc
Q psy9959         206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKC  285 (330)
Q Consensus       206 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C  285 (330)
                      .|+++++|.| .|++.|.+...|..|++. |.++++|.|..|++.|.....|..|+++|+++++             |.|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-------------~~C   68 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSM-HLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP-------------YEC   68 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHH-HSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCC-------------EEC
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHH-cCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCC-------------eeC
Confidence            5788999999 899999999999999986 8888999999999999999999999998877766             579


Q ss_pred             CCCccccCChHHHHHHHHHcCC
Q psy9959         286 ELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       286 ~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      .+|++.|.+...|..|+++|+.
T Consensus        69 ~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           69 NICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             SSSCCEESCHHHHHHHHHHHHH
T ss_pred             CCCcchhcCHHHHHHHHHHccc
Confidence            9999999999999999998864

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=4.1e-19  Score=131.83  Aligned_cols=87  Identities=28%  Similarity=0.568  Sum_probs=80.4

Q ss_pred             hhCCCCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHH
Q psy9959         178 SHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKM  257 (330)
Q Consensus       178 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L  257 (330)
                      .|.+.++|.| .|++.|.+...|..|++.|++.++|.|..|++.|.....|..|++. |.++++|.|..|++.|.....|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI-HTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT-TCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHH-cCCCCCeeCCCCcchhcCHHHH
Confidence            4778899999 8999999999999999999999999999999999999999999986 8889999999999999999999


Q ss_pred             HHHHHHhcC
Q psy9959         258 RNHMRSHTG  266 (330)
Q Consensus       258 ~~H~~~h~~  266 (330)
                      ..|++.|+.
T Consensus        82 ~~H~~~~~~   90 (110)
T 2csh_A           82 HRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHccc
Confidence            999999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=6.7e-19  Score=127.02  Aligned_cols=87  Identities=29%  Similarity=0.600  Sum_probs=72.7

Q ss_pred             CCCCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCC--CCccccccCccccCHHHH
Q psy9959         180 SEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE--KPHKCSICDYASVELSKM  257 (330)
Q Consensus       180 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~--~~~~C~~C~k~f~~~~~L  257 (330)
                      .+.++|.|..|++.|.+...|..|++.|+++++|.|..|++.|.....|..|++. |.+.  ++|.|..|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS-HDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHH-HCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHH-hcCCCCCceECCCccchhCCHHHH
Confidence            4567888888888888888888888888888888999999999888889999886 6555  889999999999999999


Q ss_pred             HHHHH-HhcCC
Q psy9959         258 RNHMR-SHTGE  267 (330)
Q Consensus       258 ~~H~~-~h~~~  267 (330)
                      ..|++ .|.++
T Consensus        82 ~~H~~~~H~~~   92 (95)
T 2yt9_A           82 NGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHTSCCC
T ss_pred             HHHHHHhcCCC
Confidence            99986 56543

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.77  E-value=4.4e-19  Score=115.52  Aligned_cols=59  Identities=27%  Similarity=0.582  Sum_probs=51.1

Q ss_pred             CCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         238 HEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       238 ~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      .|+||.|..||+.|...+.|..|+++|++++||             .|.+||++|.+.+.|..|+++|+|++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~-------------~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPR-------------SCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCE-------------ECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCe-------------ECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            378999999999999999999999998888774             69999999999999999999998874

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.74  E-value=7.3e-18  Score=122.72  Aligned_cols=85  Identities=38%  Similarity=0.740  Sum_probs=68.1

Q ss_pred             CcCceecCc--cccccCChHHHHHHHhhhcCCCCCcccc--ccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccc
Q psy9959         209 GVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCS--ICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWK  284 (330)
Q Consensus       209 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~  284 (330)
                      ..++|.|.+  |++.|.....|..|++. |.++++|.|.  .|++.|.....|..|+++|+++++             |.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-------------~~   77 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRT-HTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP-------------FQ   77 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHH-HSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCS-------------CB
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHH-hCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCC-------------eE
Confidence            345788886  88888888888888885 7778888886  588888888888888888877666             46


Q ss_pred             cCCCccccCChHHHHHHHHHcCC
Q psy9959         285 CELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       285 C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      |.+|++.|.+...|..|+++|++
T Consensus        78 C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           78 CGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCCCcCccCCHHHHHHHHHHhCC
Confidence            88888888888888888888864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.73  E-value=1e-17  Score=119.14  Aligned_cols=83  Identities=39%  Similarity=0.742  Sum_probs=70.1

Q ss_pred             cCceecCc--cccccCChHHHHHHHhhhcCCCCCcccc--ccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCcccc
Q psy9959         210 VKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCS--ICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKC  285 (330)
Q Consensus       210 ~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C  285 (330)
                      ..+|.|..  |++.|.+...|..|++. |.++++|.|+  .|++.|.....|..|+++|+++++             |.|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-------------~~C   68 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRT-HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP-------------FQC   68 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTT-SCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCC-------------EEC
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHh-cCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCC-------------ccC
Confidence            45788888  88888888888888885 8888889997  599999999999999888887766             469


Q ss_pred             CCCccccCChHHHHHHHHHcC
Q psy9959         286 ELCPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       286 ~~C~~~F~~~~~L~~H~~~H~  306 (330)
                      ..|++.|.+...|..|+++|.
T Consensus        69 ~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           69 QKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             SSSSCEESSHHHHHHHGGGGC
T ss_pred             CCCCcccCCHHHHHHHHHhhC
Confidence            999999999999999988873

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.73  E-value=7.9e-18  Score=122.53  Aligned_cols=84  Identities=38%  Similarity=0.747  Sum_probs=58.1

Q ss_pred             CCCeeecc--CcccccchhhhhhccccccCcCceecC--ccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHH
Q psy9959         182 ERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCK--YCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKM  257 (330)
Q Consensus       182 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L  257 (330)
                      .++|.|..  |++.|.....|..|++.|++.++|.|.  .|++.|.....|..|++. |.++++|.|..|++.|.....|
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK-HTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHH-HTSCCSCBCSSSCCBCSSHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHH-hCCCCCeECCCCcCccCCHHHH
Confidence            34566664  666666666666666666666667775  477777777777777764 6677777777777777777777


Q ss_pred             HHHHHHhcC
Q psy9959         258 RNHMRSHTG  266 (330)
Q Consensus       258 ~~H~~~h~~  266 (330)
                      ..|+++|++
T Consensus        92 ~~H~~~H~~  100 (100)
T 2ebt_A           92 ALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            777777753

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.72  E-value=1.3e-18  Score=123.70  Aligned_cols=80  Identities=28%  Similarity=0.416  Sum_probs=49.6

Q ss_pred             CceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCcc
Q psy9959         211 KPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPY  290 (330)
Q Consensus       211 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~  290 (330)
                      +||.|..|++.|.....|..|++. |.++++|.|..|++.|.....|..|++.|++ .             +|.|..|++
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~-------------~~~c~~C~~   66 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDERKRHRDIQHI-L-------------PILEDKVEE   66 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHH-HHCCCCEECTTTCCEESSHHHHHHHHHHHTH-H-------------HHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHH-cCCCCCccCCCCCCccCCHHHHHHHHHHhCC-C-------------cchHHHHHH
Confidence            456666666666666666666664 5566666666666666666666666666652 1             245666666


Q ss_pred             ccCChHHHHHHHHHc
Q psy9959         291 ASSSQRHLESHMLIH  305 (330)
Q Consensus       291 ~F~~~~~L~~H~~~H  305 (330)
                      .|.+...|..|++.+
T Consensus        67 ~f~~~~~L~~H~~~~   81 (88)
T 1llm_C           67 LLSKNYHLENEVARL   81 (88)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhHHHHHHH
Confidence            666666666666543

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.72  E-value=3.6e-18  Score=111.17  Aligned_cols=58  Identities=24%  Similarity=0.591  Sum_probs=43.4

Q ss_pred             cCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCC
Q psy9959         210 VKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       210 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      ++||.|.+|++.|.....|..|+++ |++++||.|..||+.|...+.|..|+++|+|+.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~-Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRA-HLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHH-HHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHH-hCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            5777777777777777777777775 777777777777777777777777777777653

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.71  E-value=7.5e-18  Score=119.88  Aligned_cols=82  Identities=37%  Similarity=0.728  Sum_probs=64.6

Q ss_pred             CCCeeecc--CcccccchhhhhhccccccCcCceecC--ccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHH
Q psy9959         182 ERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCK--YCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKM  257 (330)
Q Consensus       182 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L  257 (330)
                      ..+|.|..  |++.|.+...|..|++.|++.++|.|.  .|++.|.+...|..|++. |.++++|.|+.|++.|.....|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK-HTGHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHH-HHCCCCEECSSSSCEESSHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHH-cCCCCCccCCCCCcccCCHHHH
Confidence            35677877  888888888888888888777888886  488888888888888775 7777888888888888888888


Q ss_pred             HHHHHHh
Q psy9959         258 RNHMRSH  264 (330)
Q Consensus       258 ~~H~~~h  264 (330)
                      ..|+++|
T Consensus        82 ~~H~~~H   88 (89)
T 2wbs_A           82 ALHMKRH   88 (89)
T ss_dssp             HHHGGGG
T ss_pred             HHHHHhh
Confidence            8888776

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=9.6e-18  Score=116.52  Aligned_cols=71  Identities=20%  Similarity=0.527  Sum_probs=59.4

Q ss_pred             CCCCCccccc--cCccccCHHHHHHHHH-HhcCCCCceeeecccCCCCccccCC--CccccCChHHHHHHHHHcCCCCCc
Q psy9959         237 THEKPHKCSI--CDYASVELSKMRNHMR-SHTGERPYQLHCKSHEGEKCWKCEL--CPYASSSQRHLESHMLIHTDQKPY  311 (330)
Q Consensus       237 ~~~~~~~C~~--C~k~f~~~~~L~~H~~-~h~~~~~~~~h~~~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~~p~  311 (330)
                      +++++|.|..  |++.|.+...|..|++ .|.++++             |.|..  |++.|.+...|..|+++|++++||
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~-------------~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~   69 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS-------------FSCPEPACGKSFNFKKHLKEHMKLHSDTRDY   69 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCC-------------EECSCTTTCCEESSHHHHHHHHHHHHTSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCC-------------eECCCCCCcCccCCHHHHHHHHHHhCCCCCe
Confidence            4677888887  8888888888888888 5766665             56888  999999888999998888888889


Q ss_pred             ccccCChhh
Q psy9959         312 LCDHCDQIR  320 (330)
Q Consensus       312 ~C~~C~~~f  320 (330)
                      .|+.||+.|
T Consensus        70 ~C~~C~k~F   78 (79)
T 2dlk_A           70 ICEFSGPSS   78 (79)
T ss_dssp             SCCSSSCCC
T ss_pred             eCCCCCCCC
Confidence            999998887

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=7.6e-18  Score=119.04  Aligned_cols=83  Identities=17%  Similarity=0.191  Sum_probs=59.5

Q ss_pred             HHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCC
Q psy9959         228 LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       228 l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      |.+|+++ |+++++|.|..|++.|.....|..|++.|++..         ..+++|.|..|++.|.+...|..|+++|++
T Consensus         3 ~~~H~~~-H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~---------~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   72 (86)
T 1x6h_A            3 SGSSGRT-HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN---------FVPAAFVCSKCGKTFTRRNTMARHADNCAG   72 (86)
T ss_dssp             TTCCSTT-CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS---------CCCCCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             cccccce-ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc---------CCCcceECCCCCChhCCHHHHHHHHHHccC
Confidence            4456664 677777777777777777777777777665541         012346788888888888888888888888


Q ss_pred             CCCcccccCChhh
Q psy9959         308 QKPYLCDHCDQIR  320 (330)
Q Consensus       308 ~~p~~C~~C~~~f  320 (330)
                      +++|.|..|+..|
T Consensus        73 ~~~~~~~~~~~~~   85 (86)
T 1x6h_A           73 PDGVEGENSGPSS   85 (86)
T ss_dssp             CCSCCCCCCCCCC
T ss_pred             CCCcccCCCCCCC
Confidence            8888888887754

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=4.5e-17  Score=114.99  Aligned_cols=81  Identities=26%  Similarity=0.344  Sum_probs=72.4

Q ss_pred             hhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCC---CCccccccCccccCHHHHHHHHHHhcCCCCceeeec
Q psy9959         199 SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE---KPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCK  275 (330)
Q Consensus       199 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~---~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~  275 (330)
                      +|..|+++|+++++|.|..|++.|.....|..|++.+|...   ++|.|..|++.|.....|..|+++|++++++     
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~-----   76 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGV-----   76 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSC-----
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCc-----
Confidence            57789999999999999999999999999999998756553   7899999999999999999999999888775     


Q ss_pred             ccCCCCccccCCCcccc
Q psy9959         276 SHEGEKCWKCELCPYAS  292 (330)
Q Consensus       276 ~~~~~k~~~C~~C~~~F  292 (330)
                              .|..|+..|
T Consensus        77 --------~~~~~~~~~   85 (86)
T 1x6h_A           77 --------EGENSGPSS   85 (86)
T ss_dssp             --------CCCCCCCCC
T ss_pred             --------ccCCCCCCC
Confidence                    699999876

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.68  E-value=2.7e-18  Score=122.04  Aligned_cols=83  Identities=29%  Similarity=0.503  Sum_probs=73.2

Q ss_pred             CCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHH
Q psy9959         182 ERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHM  261 (330)
Q Consensus       182 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~  261 (330)
                      +++|.|..|++.|.....|..|+++|+++++|.|..|++.|.....|..|++.+|  ..+|.|..|++.|.....|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~--~~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH--ILPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC--CCcchHHHHHHHHHHHhhhHHHH
Confidence            3689999999999999999999999999999999999999999999999998755  37899999999999999999999


Q ss_pred             HHhcC
Q psy9959         262 RSHTG  266 (330)
Q Consensus       262 ~~h~~  266 (330)
                      +.+++
T Consensus        79 ~~~h~   83 (88)
T 1llm_C           79 ARLKK   83 (88)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88754

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.67  E-value=9.4e-17  Score=113.00  Aligned_cols=78  Identities=23%  Similarity=0.478  Sum_probs=65.4

Q ss_pred             ceec--CccccccCChHHHHHHHhhhcCCCCCccccc--cCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCC
Q psy9959         212 PHKC--KYCESRFTTSGELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL  287 (330)
Q Consensus       212 ~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~  287 (330)
                      ||.|  ..|++.|.....|..|++. |.++++|.|+.  |++.|.....|..|+++|++                |.|..
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----------------~~C~~   63 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFS-HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----------------YPCKK   63 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHH-HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS----------------EECCS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHH-hCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC----------------CCCCC
Confidence            5788  7888888888888888875 77888888887  88888888888888888876                46888


Q ss_pred             ---CccccCChHHHHHHHHHcC
Q psy9959         288 ---CPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       288 ---C~~~F~~~~~L~~H~~~H~  306 (330)
                         |++.|.+...|..|+++|+
T Consensus        64 ~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           64 DDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             CSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCCCccCCHHHHHHHHHhcC
Confidence               8888888888888888875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.67  E-value=8.1e-18  Score=128.55  Aligned_cols=112  Identities=13%  Similarity=0.094  Sum_probs=78.5

Q ss_pred             hCCCCCeeeccCccc--ccchhhhhhccccccCcCceecCccccccC------ChHHHHHHHhhhcCCCCCccccccCcc
Q psy9959         179 HSEERPHKCSVCERG--FKTIASLQNHINTHTGVKPHKCKYCESRFT------TSGELVRHVRYKHTHEKPHKCSICDYA  250 (330)
Q Consensus       179 h~~~~~~~C~~C~~~--f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~------~~~~l~~H~~~~H~~~~~~~C~~C~k~  250 (330)
                      +.+.++|.|..++..  |.....+..|.. ....+.+.|..|++.|.      ....|..|++  |++++||.|..|++.
T Consensus         7 ~~~~k~~~~~~k~~~~~~s~ee~~~~~~l-~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~--h~~~~~~~C~~C~k~   83 (129)
T 2wbt_A            7 DSGSKKYLSNHKGIFIHVTLEELKRYHQL-TPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLA--SKAISQFVCPLCLMP   83 (129)
T ss_dssp             CTTCCGGGGCSSCEEEECCHHHHHHHTTS-CHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHHH--HHHHCSEECTTTCCE
T ss_pred             cccccccccccCCeeeeecHHhhhccccC-ChhhCcccchhhhcccCCCcccCCHHHHHHHHH--hCCCCCeECCCCCcc
Confidence            456666766654332  222222222222 22345566777665554      5666777764  778899999999999


Q ss_pred             ccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCC
Q psy9959         251 SVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       251 f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      |.....|..|+++|  ++|             |.|..|++.|.+...|..|+++|++.
T Consensus        84 f~~~~~l~~H~~~H--~~~-------------~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           84 FSSSVSLKQHIRYT--EHT-------------KVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             ESSHHHHHHHHHHT--CCC-------------CBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             cCCHhHHHHHHHHC--CCC-------------CCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            99999999999987  555             57999999999999999999999875

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=8.1e-17  Score=111.26  Aligned_cols=66  Identities=32%  Similarity=0.579  Sum_probs=57.0

Q ss_pred             hcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccc
Q psy9959         235 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC  313 (330)
Q Consensus       235 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C  313 (330)
                      .+.++++|.|..|++.|.....|..|+++|+++++             |.|.+|++.|.+...|..|+++|++++||.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-------------~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKP-------------YKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCS-------------EECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcC-------------eeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            36678889999999999999999999888877666             5699999999999999999999999999987

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=2.2e-16  Score=109.61  Aligned_cols=73  Identities=26%  Similarity=0.575  Sum_probs=59.4

Q ss_pred             cCcCceecCc--cccccCChHHHHHHHhhhcCCCCCccccc--cCccccCHHHHHHHHHHhcCCCCceeeecccCCCCcc
Q psy9959         208 TGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCW  283 (330)
Q Consensus       208 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~  283 (330)
                      +++++|.|..  |++.|.+...|..|++..|.++++|.|..  |++.|.....|..|+++|++++|             |
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-------------~   69 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD-------------Y   69 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCC-------------C
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCC-------------e
Confidence            4567888876  88888888888888874488888888888  88888888888888888887766             4


Q ss_pred             ccCCCccccC
Q psy9959         284 KCELCPYASS  293 (330)
Q Consensus       284 ~C~~C~~~F~  293 (330)
                      .|.+|+++|.
T Consensus        70 ~C~~C~k~F~   79 (79)
T 2dlk_A           70 ICEFSGPSSG   79 (79)
T ss_dssp             SCCSSSCCCC
T ss_pred             eCCCCCCCCC
Confidence            6888888884

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.65  E-value=2.4e-16  Score=107.96  Aligned_cols=64  Identities=31%  Similarity=0.677  Sum_probs=55.3

Q ss_pred             hcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCc
Q psy9959         235 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPY  311 (330)
Q Consensus       235 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~  311 (330)
                      .+.++++|.|..|++.|.....|..|+++|+++++             |.|.+|++.|.+...|.+|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~-------------~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKP-------------YRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCS-------------EECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCC-------------EECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            36778889999999999999999999998887766             46999999999999999999999998886

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.65  E-value=9.9e-17  Score=112.88  Aligned_cols=78  Identities=26%  Similarity=0.516  Sum_probs=61.9

Q ss_pred             Ceee--ccCcccccchhhhhhccccccCcCceecCc--cccccCChHHHHHHHhhhcCCCCCccccc---cCccccCHHH
Q psy9959         184 PHKC--SVCERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPHKCSI---CDYASVELSK  256 (330)
Q Consensus       184 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~---C~k~f~~~~~  256 (330)
                      ||.|  ..|++.|.+...|..|+++|+++++|.|..  |++.|.....|.+|++. |.+   |.|..   |++.|.....
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHH-HHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHH-hCC---CCCCCCCCCCCccCCHHH
Confidence            5778  778888888888888888888888888877  88888888888888876 555   78888   8888888888


Q ss_pred             HHHHHHHhc
Q psy9959         257 MRNHMRSHT  265 (330)
Q Consensus       257 L~~H~~~h~  265 (330)
                      |..|+++|+
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            888887764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.2e-16  Score=115.89  Aligned_cols=72  Identities=17%  Similarity=0.374  Sum_probs=59.7

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHH-hcCCCCceeeecccCCCCccccCCCccccCChHHHHHH-HHHcCCCCCccc
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRS-HTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESH-MLIHTDQKPYLC  313 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H-~~~H~~~~p~~C  313 (330)
                      -++++||.|..|++.|...+.|..|++. |++.          .++++|.|..||++|.+.+.|..| +++|++++||.|
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~----------~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C   82 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV----------VLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKL   82 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSC----------CCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEE
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC----------CCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeC
Confidence            3578899999999999999999999974 7331          123446799999999999999999 799999999999


Q ss_pred             ccCC
Q psy9959         314 DHCD  317 (330)
Q Consensus       314 ~~C~  317 (330)
                      ..+.
T Consensus        83 ~~~~   86 (102)
T 2ghf_A           83 TMVK   86 (102)
T ss_dssp             EECC
T ss_pred             Cccc
Confidence            8754

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.64  E-value=4.3e-17  Score=118.21  Aligned_cols=80  Identities=19%  Similarity=0.311  Sum_probs=58.3

Q ss_pred             ccCChHHHHHHHhhhcCCCCCccccccCcccc-CHHHHHHHHHHhcC-CCCceeeecccCCCCccccCCCccccCChHHH
Q psy9959         221 RFTTSGELVRHVRYKHTHEKPHKCSICDYASV-ELSKMRNHMRSHTG-ERPYQLHCKSHEGEKCWKCELCPYASSSQRHL  298 (330)
Q Consensus       221 ~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~-~~~~L~~H~~~h~~-~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L  298 (330)
                      .+.....+..|++. |.++++|.|..|++.|. ....|..|+++|++ +++             |.|.+|++.|.+...|
T Consensus         5 s~~~~~~~~~h~~~-h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~-------------~~C~~C~k~F~~~~~L   70 (98)
T 2gqj_A            5 SSGPGGPEEQWQRA-IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDA-------------LKCQHCRKQFKSKAGL   70 (98)
T ss_dssp             CCCCCCSCSHHHHT-TTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHH-------------HSCSSSCCCCSCHHHH
T ss_pred             CCCCCCcHHHHHHH-hccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCC-------------EECCCCCCccCCHHHH
Confidence            34445556677774 77777888888888887 78888888877766 544             5688888888888888


Q ss_pred             HHHHHHcCCCCCcccc
Q psy9959         299 ESHMLIHTDQKPYLCD  314 (330)
Q Consensus       299 ~~H~~~H~~~~p~~C~  314 (330)
                      ..|+++|++++|+...
T Consensus        71 ~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           71 NYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             HHHHHHHSCSCSSCCC
T ss_pred             HHHHHHHcCCCCCCCC
Confidence            8888888877775543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=4.6e-16  Score=112.04  Aligned_cols=79  Identities=13%  Similarity=0.220  Sum_probs=63.4

Q ss_pred             cccCChHHHHHHHhhhcCCCCCccccccCccc-cCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHH
Q psy9959         220 SRFTTSGELVRHVRYKHTHEKPHKCSICDYAS-VELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHL  298 (330)
Q Consensus       220 ~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f-~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L  298 (330)
                      ..|.....|..|++. |.++++|.|..|++.| .....|..|+++| ++++             |.|.+|++.|.+...|
T Consensus        14 ~~~~~~~~~~~~~~~-~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~-------------~~C~~Cgk~F~~~~~L   78 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLE-IVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEM-------------FTCHHCGKQLRSLAGM   78 (96)
T ss_dssp             CSSCTTCHHHHHHHH-HHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCC-------------CCCSSSCCCCSSHHHH
T ss_pred             CCCCCchHHHHHHHH-hcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCC-------------eECCCCCCeeCCHHHH
Confidence            456777778888875 7778888888888888 8888888888888 7766             4688999999988899


Q ss_pred             HHH-HHHcCCCCCccc
Q psy9959         299 ESH-MLIHTDQKPYLC  313 (330)
Q Consensus       299 ~~H-~~~H~~~~p~~C  313 (330)
                      ..| +++|+++..|.+
T Consensus        79 ~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           79 KYHVMANHNSLPSGPS   94 (96)
T ss_dssp             HHHHHHHTCCCSSCSC
T ss_pred             HHHhHHhcCCCCCCCC
Confidence            999 788876655544

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=1.3e-16  Score=115.68  Aligned_cols=77  Identities=13%  Similarity=0.158  Sum_probs=66.9

Q ss_pred             cccchhhhhhccccccCcCceecCccccccC-ChHHHHHHHhhhcCC-CCCccccccCccccCHHHHHHHHHHhcCCCCc
Q psy9959         193 GFKTIASLQNHINTHTGVKPHKCKYCESRFT-TSGELVRHVRYKHTH-EKPHKCSICDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       193 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      .+.....+..|+++|.++++|.|.+|++.|. ....|.+|++. |.+ +++|.|.+|++.|.....|..|+++|++++|+
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~-h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEV-CQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHH-HHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHH-HcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            4556667788899999999999999999999 99999999986 666 88999999999999999999999999988875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=9.6e-16  Score=105.78  Aligned_cols=69  Identities=33%  Similarity=0.566  Sum_probs=62.4

Q ss_pred             hhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCC-CCccccccCccccCHHHHHHHHHHhcCC
Q psy9959         199 SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE-KPHKCSICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       199 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~-~~~~C~~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      +|..|+++|+++++|.|.+|++.|.....|..|++..|.++ ++|.|..|++.|.....|..|++.|++.
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            46789999999999999999999999999999998568775 8999999999999999999999987654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.5e-15  Score=102.66  Aligned_cols=63  Identities=29%  Similarity=0.615  Sum_probs=39.0

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCc
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPY  311 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~  311 (330)
                      |+++++|.|..|++.|.....|..|+++|+++++             |.|.+|++.|.+...|..|+++|++++|.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-------------~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRP-------------FKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCS-------------EECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-------------EeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            5556666666666666666666666666555544             34666666666666666666666666553

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.58  E-value=2.7e-15  Score=102.66  Aligned_cols=64  Identities=38%  Similarity=0.752  Sum_probs=56.2

Q ss_pred             cccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCc
Q psy9959         206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       206 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      .+.++++|.|..|++.|.....|..|++. |.++++|.|..|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTV-HTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHH-HCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHH-cCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            46677889999999999999999999986 88889999999999999999999999999888875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.57  E-value=1.9e-16  Score=120.82  Aligned_cols=108  Identities=16%  Similarity=0.114  Sum_probs=82.4

Q ss_pred             ccccCcCceecCccccc--cCChHHHHHHHhhhcCCCCCccccccCcccc------CHHHHHHHHHHhcCCCCceeeecc
Q psy9959         205 NTHTGVKPHKCKYCESR--FTTSGELVRHVRYKHTHEKPHKCSICDYASV------ELSKMRNHMRSHTGERPYQLHCKS  276 (330)
Q Consensus       205 ~~h~~~~~~~C~~C~~~--f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~------~~~~L~~H~~~h~~~~~~~~h~~~  276 (330)
                      .++.|.++|.|...+..  |.....+..|..  ....+.+.|..|++.|.      ....|..|+ .|++++|       
T Consensus         5 ~~~~~~k~~~~~~k~~~~~~s~ee~~~~~~l--~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~-------   74 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIHVTLEELKRYHQL--TPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQ-------   74 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEECCHHHHHHHTTS--CHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCS-------
T ss_pred             hhcccccccccccCCeeeeecHHhhhccccC--ChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCC-------
Confidence            35778899988775543  333322222322  23456788998887776      667777777 5777666       


Q ss_pred             cCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhHhhhhHhhcC
Q psy9959         277 HEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAIR  330 (330)
Q Consensus       277 ~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~  330 (330)
                            |.|.+||+.|.+...|..|+++|  ++||.|+.||+.|.....|.+|.
T Consensus        75 ------~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~  120 (129)
T 2wbt_A           75 ------FVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHV  120 (129)
T ss_dssp             ------EECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHH
T ss_pred             ------eECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHH
Confidence                  57999999999999999999999  89999999999999999999983

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.57  E-value=1.2e-15  Score=106.55  Aligned_cols=58  Identities=14%  Similarity=0.210  Sum_probs=54.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhHhhhhHhhc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAI  329 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H  329 (330)
                      ....++.+.++|.|++||+.|.+...|.+|+++|++++||.|+.|++.|.....|.+|
T Consensus        18 ~~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H   75 (85)
T 2lv2_A           18 GVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRH   75 (85)
T ss_dssp             SCCSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHH
T ss_pred             CCCCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHh
Confidence            4456677888999999999999999999999999999999999999999999999998

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=4e-15  Score=101.21  Aligned_cols=65  Identities=42%  Similarity=0.597  Sum_probs=59.2

Q ss_pred             ccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCC
Q psy9959         203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       203 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      +.++|+++++|.|.+|++.|.....|..|++. |.++++|.|..|++.|.....|..|+++|+++.
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRV-HTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHG-GGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHh-cCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            56788999999999999999999999999986 888999999999999999999999999998764

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=3.6e-15  Score=102.84  Aligned_cols=51  Identities=39%  Similarity=0.739  Sum_probs=20.2

Q ss_pred             CCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHh
Q psy9959         183 RPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVR  233 (330)
Q Consensus       183 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  233 (330)
                      ++|.|..|++.|.....|..|+++|+++++|.|.+|++.|.....|.+|++
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   67 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR   67 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGG
T ss_pred             CCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHH
Confidence            333333333333333333333333333333444444444444444444433

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=3.2e-15  Score=107.63  Aligned_cols=72  Identities=17%  Similarity=0.249  Sum_probs=44.7

Q ss_pred             cccchhhhhhccccccCcCceecCcccccc-CChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHH-HHHhcC
Q psy9959         193 GFKTIASLQNHINTHTGVKPHKCKYCESRF-TTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNH-MRSHTG  266 (330)
Q Consensus       193 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H-~~~h~~  266 (330)
                      .|.....|..|++.|++.++|.|..|++.| .....|..|++. | ++++|.|..|++.|.....|..| +++|++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~-h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMEN-C-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHH-H-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHH-H-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            344555555566666666666666666666 666666666664 5 66666666666666666666666 555543

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=6.7e-15  Score=99.47  Aligned_cols=64  Identities=25%  Similarity=0.582  Sum_probs=58.1

Q ss_pred             cccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCc
Q psy9959         206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       206 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      .|.++++|.|..|++.|.....|.+|++. |.++++|.|..|++.|.....|..|+++|++++|.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERI-HCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGG-GCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            46788999999999999999999999986 88999999999999999999999999999988774

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=2.5e-15  Score=108.81  Aligned_cols=64  Identities=20%  Similarity=0.455  Sum_probs=48.5

Q ss_pred             ccCcCceecCccccccCChHHHHHHHhhhc---CCCCCccccccCccccCHHHHHHH-HHHhcCCCCc
Q psy9959         207 HTGVKPHKCKYCESRFTTSGELVRHVRYKH---THEKPHKCSICDYASVELSKMRNH-MRSHTGERPY  270 (330)
Q Consensus       207 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H---~~~~~~~C~~C~k~f~~~~~L~~H-~~~h~~~~~~  270 (330)
                      -+|++||.|..|++.|.....|..|++..|   ++++||.|..||+.|...+.|..| +++|++++||
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy   80 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENF   80 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCE
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCe
Confidence            456778888888888888888888876447   557788888888888888888888 6777776664

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=5.5e-15  Score=100.49  Aligned_cols=63  Identities=40%  Similarity=0.569  Sum_probs=58.1

Q ss_pred             hcCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCC
Q psy9959         235 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKP  310 (330)
Q Consensus       235 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p  310 (330)
                      .|+++++|.|..|++.|.....|..|+++|+++++             |.|.+|++.|.+...|..|+++|+++.+
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~-------------~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP-------------YKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCC-------------EECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCC-------------eECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            48899999999999999999999999999988776             5799999999999999999999988653

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=5.4e-15  Score=98.66  Aligned_cols=63  Identities=22%  Similarity=0.360  Sum_probs=57.2

Q ss_pred             cccccCcCceecCccccccCChHHHHHHHhhhc-CCCCCccccccCccccCHHHHHHHHHHhcC
Q psy9959         204 INTHTGVKPHKCKYCESRFTTSGELVRHVRYKH-THEKPHKCSICDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       204 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H-~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~  266 (330)
                      +++|+++++|.|..|++.|.....|..|++..| .++++|.|+.|++.|.....|..|++.|++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            357889999999999999999999999998757 689999999999999999999999999886

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.53  E-value=1e-14  Score=94.26  Aligned_cols=57  Identities=33%  Similarity=0.675  Sum_probs=42.8

Q ss_pred             CCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCC
Q psy9959         238 HEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       238 ~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      ++++|.|..|++.|.+...|..|+++|++++|             |.|..|++.|.+...|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-------------~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKP-------------YKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCC-------------EECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCC-------------cCCCCCcchhCCHHHHHHHHHHhcC
Confidence            35678888888888888888888888877766             4688888888888888888888764

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=1.7e-17  Score=113.30  Aligned_cols=36  Identities=19%  Similarity=0.115  Sum_probs=29.9

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      ++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus        38 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           38 KTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            346788888888888888888888888888888887

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.51  E-value=1.1e-14  Score=101.75  Aligned_cols=62  Identities=21%  Similarity=0.450  Sum_probs=37.9

Q ss_pred             ccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHH-HhcCC
Q psy9959         205 NTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMR-SHTGE  267 (330)
Q Consensus       205 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~h~~~  267 (330)
                      ..+.+.++|.|++|++.|.....|.+|+++ |++++||.|.+|++.|.....|.+|++ .|.++
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRL-LHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHT-TSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhh-ccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            344455566666666666666666666664 566666666666666666666666653 34443

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.51  E-value=2.5e-14  Score=92.36  Aligned_cols=56  Identities=27%  Similarity=0.606  Sum_probs=46.1

Q ss_pred             CccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         241 PHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       241 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      ||.|..|++.|.....|..|+++|+++++             |.|..|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~-------------~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRP-------------YHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCC-------------EECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCC-------------ccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57888888888888888888888877666             468888888888888888888888765

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=3.8e-15  Score=102.74  Aligned_cols=71  Identities=25%  Similarity=0.527  Sum_probs=64.2

Q ss_pred             HHHHHhhhCCCCCeeeccCcccccchhhhhhccc-cccCc-CceecCccccccCChHHHHHHHhhhcCCCCCc
Q psy9959         172 LARHLKSHSEERPHKCSVCERGFKTIASLQNHIN-THTGV-KPHKCKYCESRFTTSGELVRHVRYKHTHEKPH  242 (330)
Q Consensus       172 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~  242 (330)
                      |.+|++.|.++++|.|..|++.|.....|..|++ .|.+. ++|.|..|++.|.....|..|++.+|..+.|.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~   75 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS   75 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            4568899999999999999999999999999997 67764 89999999999999999999999888877664

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=2.8e-14  Score=98.57  Aligned_cols=66  Identities=17%  Similarity=0.330  Sum_probs=52.4

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcC---CCCceeeecccCCCCccccCCCccccCChHHHHHHH-HHcCCCCCc
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTG---ERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHM-LIHTDQKPY  311 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~-~~H~~~~p~  311 (330)
                      |+++++|.|..|++.|.....|..|+++|++   +++             |.|.+|++.|.+...|..|+ +.|.+.++.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~-------------~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALR-------------FPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCC-------------EECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcc-------------cCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            7788888888888888888888888888875   444             57888888888888888888 456667666


Q ss_pred             ccc
Q psy9959         312 LCD  314 (330)
Q Consensus       312 ~C~  314 (330)
                      ...
T Consensus        69 ~~~   71 (78)
T 2d9h_A           69 PQE   71 (78)
T ss_dssp             CSS
T ss_pred             ccc
Confidence            543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.6e-14  Score=96.29  Aligned_cols=60  Identities=17%  Similarity=0.433  Sum_probs=54.4

Q ss_pred             hcCCCCCccccccCccccCHHHHHHHHHH-h-cCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCC
Q psy9959         235 KHTHEKPHKCSICDYASVELSKMRNHMRS-H-TGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       235 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-h-~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      .|+++++|.|..|++.|.....|..|++. | .++++             |.|+.|++.|.+...|..|+++|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~-------------~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV-------------YPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCC-------------EECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcC-------------eECCCCCCccCCHHHHHHHHHHHcC
Confidence            48899999999999999999999999998 5 35555             6799999999999999999999886

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=2.5e-14  Score=97.44  Aligned_cols=67  Identities=28%  Similarity=0.618  Sum_probs=55.0

Q ss_pred             HHHHHHhhhcCCCCCcccc--ccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHH
Q psy9959         227 ELVRHVRYKHTHEKPHKCS--ICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLI  304 (330)
Q Consensus       227 ~l~~H~~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~  304 (330)
                      .|..|....|.++++|.|+  .|++.|.....|..|+++|+++++             |.|.+|++.|.+...|..|+++
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~-------------~~C~~C~~~f~~~~~l~~H~~~   71 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKP-------------FQCRICMRNFSRSDHLTTHIRT   71 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCC-------------EECTTTCCEESCHHHHHHHHTT
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCC-------------eECCCCCchhCCHHHHHHHHHh
Confidence            4556677678888999997  599999999999999999887776             4699999999999999999988


Q ss_pred             cC
Q psy9959         305 HT  306 (330)
Q Consensus       305 H~  306 (330)
                      |+
T Consensus        72 Ht   73 (73)
T 1f2i_G           72 HT   73 (73)
T ss_dssp             CC
T ss_pred             cC
Confidence            84

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.48  E-value=2.9e-14  Score=92.06  Aligned_cols=57  Identities=37%  Similarity=0.755  Sum_probs=44.6

Q ss_pred             CcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcC
Q psy9959         209 GVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       209 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~  266 (330)
                      |+++|.|..|++.|.+...|..|++. |.++++|.|+.|++.|.....|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRT-HTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHH-HHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHH-cCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            35778888888888888888888885 7788888888888888888888888888764

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.47  E-value=7.4e-14  Score=100.28  Aligned_cols=71  Identities=17%  Similarity=0.176  Sum_probs=53.8

Q ss_pred             CCccccccCccccCHHHHHHHHHH-hcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRS-HTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      ..|.|..|++.|.....|..|+++ |.++++....     .-+.|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~-----~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNH-----VCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCC-----CCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCcc-----ceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            346788888888888888888887 6665542100     0122689999999999999999999999999999963

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.44  E-value=1e-13  Score=89.45  Aligned_cols=56  Identities=25%  Similarity=0.587  Sum_probs=44.7

Q ss_pred             ceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCC
Q psy9959         212 PHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       212 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      ||.|..|++.|.....|..|++. |.++++|.|..|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRT-HTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHH-TSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHh-cCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57788888888888888888875 777888888888888888888888888877654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=4.7e-14  Score=92.10  Aligned_cols=49  Identities=33%  Similarity=0.645  Sum_probs=47.4

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhHhhhhHhhc
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAI  329 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H  329 (330)
                      ++|.|..|++.|.+...|..|+++|++++||.|+.|++.|.....|.+|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   49 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH   49 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHH
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=8.9e-14  Score=85.50  Aligned_cols=45  Identities=27%  Similarity=0.326  Sum_probs=42.4

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999998

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.44  E-value=9.1e-14  Score=85.48  Aligned_cols=45  Identities=33%  Similarity=0.408  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|.+|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467788889999999999999999999999999999999999988

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=8.4e-14  Score=85.64  Aligned_cols=45  Identities=31%  Similarity=0.389  Sum_probs=42.4

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999998

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.43  E-value=8.4e-14  Score=85.65  Aligned_cols=45  Identities=31%  Similarity=0.355  Sum_probs=42.4

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|.+|++.|.+...|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367888899999999999999999999999999999999999998

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=8.1e-14  Score=84.82  Aligned_cols=44  Identities=30%  Similarity=0.364  Sum_probs=41.5

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      |.++|+++++|.|..|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778888999999999999999999999999999999999998

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=8.8e-14  Score=85.52  Aligned_cols=45  Identities=31%  Similarity=0.347  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999998

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.43  E-value=8.5e-14  Score=85.60  Aligned_cols=45  Identities=31%  Similarity=0.438  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|.++++|.|..|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            367788889999999999999999999999999999999999998

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.1e-13  Score=85.07  Aligned_cols=45  Identities=29%  Similarity=0.474  Sum_probs=42.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999998

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=9.2e-14  Score=85.46  Aligned_cols=45  Identities=31%  Similarity=0.420  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999998

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.4e-13  Score=89.75  Aligned_cols=56  Identities=32%  Similarity=0.656  Sum_probs=42.2

Q ss_pred             CCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHH-HHcCCC
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHM-LIHTDQ  308 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~-~~H~~~  308 (330)
                      +||.|..|++.|.....|..|+++|+++++             |.|..|++.|.+...|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-------------~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKP-------------YPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCS-------------EECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCC-------------ccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            467788888888888888888877776655             46888888888888888886 567654

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=9.2e-14  Score=85.44  Aligned_cols=45  Identities=33%  Similarity=0.412  Sum_probs=42.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999998

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1e-13  Score=85.20  Aligned_cols=45  Identities=33%  Similarity=0.340  Sum_probs=42.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|.++|+++++|.|.+|++.|.+...|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999998

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.2e-13  Score=84.88  Aligned_cols=45  Identities=24%  Similarity=0.248  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999998

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=9.5e-14  Score=95.85  Aligned_cols=62  Identities=18%  Similarity=0.301  Sum_probs=39.1

Q ss_pred             ccCcCceecCccccccCChHHHHHHHhhhcCC---CCCccccccCccccCHHHHHHHHHH-hcCCCC
Q psy9959         207 HTGVKPHKCKYCESRFTTSGELVRHVRYKHTH---EKPHKCSICDYASVELSKMRNHMRS-HTGERP  269 (330)
Q Consensus       207 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~---~~~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~  269 (330)
                      |+++++|.|.+|++.|.....|..|++. |.+   +++|.|..|++.|.....|..|++. |.+.++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRK-HAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHH-HHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHH-hhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            5566666666666666666666666665 443   5667777777777777777777643 334433

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=8.8e-14  Score=85.54  Aligned_cols=45  Identities=31%  Similarity=0.353  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999998

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1e-13  Score=85.25  Aligned_cols=45  Identities=33%  Similarity=0.406  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999998

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.42  E-value=8.4e-14  Score=85.63  Aligned_cols=45  Identities=27%  Similarity=0.243  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|.++++|.|..|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467788889999999999999999999999999999999999998

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.1e-13  Score=85.16  Aligned_cols=45  Identities=29%  Similarity=0.285  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999998

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1e-13  Score=85.21  Aligned_cols=44  Identities=34%  Similarity=0.354  Sum_probs=41.9

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      |+++|.++++|.|.+|++.|.+...|.+|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788888999999999999999999999999999999999998

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=9.3e-14  Score=85.44  Aligned_cols=45  Identities=29%  Similarity=0.319  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999998

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.1e-13  Score=85.10  Aligned_cols=44  Identities=25%  Similarity=0.274  Sum_probs=41.9

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      |.++|+++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67788899999999999999999999999999999999999998

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=9.8e-14  Score=85.35  Aligned_cols=45  Identities=29%  Similarity=0.350  Sum_probs=42.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=9.2e-14  Score=85.45  Aligned_cols=45  Identities=31%  Similarity=0.344  Sum_probs=42.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|.+|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999998

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=1.1e-13  Score=85.20  Aligned_cols=45  Identities=27%  Similarity=0.332  Sum_probs=42.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999998

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.2e-13  Score=84.97  Aligned_cols=45  Identities=36%  Similarity=0.405  Sum_probs=42.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999998

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.3e-13  Score=84.73  Aligned_cols=45  Identities=33%  Similarity=0.348  Sum_probs=41.7

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366778888889999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.1e-13  Score=85.13  Aligned_cols=45  Identities=36%  Similarity=0.454  Sum_probs=42.1

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.1e-13  Score=85.11  Aligned_cols=45  Identities=33%  Similarity=0.447  Sum_probs=42.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999998

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.4e-13  Score=84.64  Aligned_cols=45  Identities=31%  Similarity=0.358  Sum_probs=42.0

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788888889999999999999999999999999999999998

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.2e-13  Score=84.88  Aligned_cols=45  Identities=29%  Similarity=0.217  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467788889999999999999999999999999999999999998

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=9.6e-14  Score=85.37  Aligned_cols=45  Identities=22%  Similarity=0.258  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|.++++|.|..||+.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            467788889999999999999999999999999999999999998

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.3e-13  Score=84.79  Aligned_cols=45  Identities=29%  Similarity=0.428  Sum_probs=42.0

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788888899999999999999999999999999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.3e-13  Score=84.81  Aligned_cols=45  Identities=33%  Similarity=0.437  Sum_probs=42.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.41  E-value=1.2e-13  Score=84.96  Aligned_cols=45  Identities=33%  Similarity=0.406  Sum_probs=42.0

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788888899999999999999999999999999999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.2e-13  Score=84.98  Aligned_cols=44  Identities=30%  Similarity=0.351  Sum_probs=41.8

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      |.++|.++++|.|..|++.|.+...|.+|+++|++++||.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67788889999999999999999999999999999999999998

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.3e-13  Score=84.78  Aligned_cols=45  Identities=22%  Similarity=0.192  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.1e-13  Score=85.13  Aligned_cols=45  Identities=29%  Similarity=0.384  Sum_probs=42.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.2e-13  Score=84.91  Aligned_cols=45  Identities=29%  Similarity=0.330  Sum_probs=42.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|.++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999998

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.6e-13  Score=84.30  Aligned_cols=44  Identities=30%  Similarity=0.328  Sum_probs=41.7

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      |.++|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            66788888999999999999999999999999999999999998

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.2e-13  Score=84.91  Aligned_cols=45  Identities=31%  Similarity=0.423  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999998

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.5e-15  Score=103.49  Aligned_cols=71  Identities=21%  Similarity=0.254  Sum_probs=62.0

Q ss_pred             hhHHHHHHhhhCCCCCeeeccCcccccchhhhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         169 RYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       169 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      ...|..|++.|.+.++|.|..|++.|.....|..       +++|.|..|++.|.....|..|++. |+++++|.|..|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~-H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGN-ESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSC-CCCCCCSSCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHh-hcCCCCCCCCCC
Confidence            3456778888999999999999999998888876       6789999999999999999999986 889999999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=1.5e-13  Score=84.41  Aligned_cols=45  Identities=22%  Similarity=0.151  Sum_probs=42.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.40  E-value=1.4e-13  Score=84.67  Aligned_cols=45  Identities=24%  Similarity=0.288  Sum_probs=42.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999998

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.40  E-value=1.9e-13  Score=84.05  Aligned_cols=44  Identities=27%  Similarity=0.329  Sum_probs=41.6

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      |.++|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56788888999999999999999999999999999999999998

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=9.3e-14  Score=85.44  Aligned_cols=45  Identities=31%  Similarity=0.396  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999998

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.4e-13  Score=84.67  Aligned_cols=45  Identities=33%  Similarity=0.420  Sum_probs=41.7

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366778888889999999999999999999999999999999998

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.7e-13  Score=84.20  Aligned_cols=44  Identities=27%  Similarity=0.298  Sum_probs=41.8

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      |.++|.++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            66788889999999999999999999999999999999999998

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1e-13  Score=85.20  Aligned_cols=45  Identities=31%  Similarity=0.409  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999998

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.2e-13  Score=83.72  Aligned_cols=45  Identities=31%  Similarity=0.392  Sum_probs=41.8

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999976

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.38  E-value=1.7e-13  Score=87.40  Aligned_cols=48  Identities=25%  Similarity=0.363  Sum_probs=44.2

Q ss_pred             cccCCCCccccCCCccccCChHHHHHHHH-HcCCCCCcccccCChhhHh
Q psy9959         275 KSHEGEKCWKCELCPYASSSQRHLESHML-IHTDQKPYLCDHCDQIRIL  322 (330)
Q Consensus       275 ~~~~~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~~p~~C~~C~~~f~~  322 (330)
                      ..+.++++|.|.+|++.|.+...|..|++ +|++++||.|+.|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            35678889999999999999999999997 8999999999999999975

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.3e-13  Score=83.28  Aligned_cols=45  Identities=27%  Similarity=0.261  Sum_probs=42.3

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHH-HcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHML-IHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~~p~~C~~C  316 (330)
                      .|.++|.++++|.|..|++.|.+...|..|++ +|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            36788889999999999999999999999999 9999999999998

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=3e-13  Score=91.99  Aligned_cols=66  Identities=36%  Similarity=0.742  Sum_probs=51.7

Q ss_pred             hhhhccc-cccCcCceecC--ccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhc
Q psy9959         199 SLQNHIN-THTGVKPHKCK--YCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       199 ~l~~H~~-~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~  265 (330)
                      .|..|++ +|.++++|.|+  .|++.|.....|..|++. |.++++|.|..|++.|.....|..|+++|+
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHH-HHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHh-hCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            3444543 47788888997  599999988889999885 778888999999999999999998888764

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.5e-13  Score=82.79  Aligned_cols=45  Identities=38%  Similarity=0.462  Sum_probs=41.9

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .|.++|+++++|.|..|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999976

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.37  E-value=3.7e-13  Score=82.28  Aligned_cols=43  Identities=16%  Similarity=0.287  Sum_probs=40.5

Q ss_pred             cccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccCC
Q psy9959         275 KSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCD  317 (330)
Q Consensus       275 ~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~  317 (330)
                      .+|+++++|.|..|++.|.+...|..|+++|+++++|.|+.||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            3578888999999999999999999999999999999999997

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.34  E-value=6.7e-13  Score=79.76  Aligned_cols=42  Identities=21%  Similarity=0.314  Sum_probs=39.2

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccc
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~  314 (330)
                      |+++|+++++|.|..|++.|.+...|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567788888999999999999999999999999999999995

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.34  E-value=5e-13  Score=82.91  Aligned_cols=43  Identities=30%  Similarity=0.461  Sum_probs=40.4

Q ss_pred             ccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccCCh
Q psy9959         276 SHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQ  318 (330)
Q Consensus       276 ~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~  318 (330)
                      .+.++++|.|.+|++.|.+...|..|+++|++++||.|++||+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            4667888999999999999999999999999999999999986

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=6.1e-13  Score=81.68  Aligned_cols=44  Identities=32%  Similarity=0.418  Sum_probs=41.1

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      +.++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            35678888999999999999999999999999999999999998

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=6e-13  Score=88.62  Aligned_cols=60  Identities=15%  Similarity=0.371  Sum_probs=47.7

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccC-CCccccCChHHHHHHHHHcCCCCC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCE-LCPYASSSQRHLESHMLIHTDQKP  310 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~-~C~~~F~~~~~L~~H~~~H~~~~p  310 (330)
                      ..+.+||.|..|++.|. ...|..|+++ ++++|             |.|. .||+.|..++.|..|+++|...+|
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p-------------~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLP-------------VACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSE-------------EECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcC-------------ccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            45677888888888888 8888888887 76665             4688 888888888888888888876654

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.2e-12  Score=78.60  Aligned_cols=42  Identities=24%  Similarity=0.327  Sum_probs=39.0

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccc
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~  314 (330)
                      |+++|.++++|.|..|++.|.+.+.|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788888999999999999999999999999999999995

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1e-12  Score=80.70  Aligned_cols=44  Identities=34%  Similarity=0.416  Sum_probs=40.8

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.32  E-value=9.9e-13  Score=80.73  Aligned_cols=44  Identities=32%  Similarity=0.397  Sum_probs=40.7

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999974

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.32  E-value=1.8e-13  Score=89.96  Aligned_cols=56  Identities=11%  Similarity=0.227  Sum_probs=49.6

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhHhhhhHhhcC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAIR  330 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~  330 (330)
                      .|.++|.++++|.|+.||+.|.....|.   ++|++++||.|+.||+.|....++..|+
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~~   59 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPKK   59 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCCC
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccccccc
Confidence            4777888889999999999999998886   8899999999999999999888776553

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.8e-13  Score=81.79  Aligned_cols=43  Identities=33%  Similarity=0.434  Sum_probs=40.6

Q ss_pred             ecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         274 CKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       274 ~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      .++|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4678888999999999999999999999999999999999998

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1e-12  Score=80.71  Aligned_cols=44  Identities=25%  Similarity=0.301  Sum_probs=40.7

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.3e-12  Score=80.13  Aligned_cols=43  Identities=23%  Similarity=0.333  Sum_probs=40.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~  314 (330)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677888899999999999999999999999999999999997

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.3e-12  Score=80.11  Aligned_cols=44  Identities=27%  Similarity=0.354  Sum_probs=40.8

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46788889999999999999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.2e-12  Score=80.38  Aligned_cols=44  Identities=34%  Similarity=0.431  Sum_probs=40.7

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999974

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=2.8e-12  Score=91.93  Aligned_cols=59  Identities=32%  Similarity=0.459  Sum_probs=44.6

Q ss_pred             ceecCccccccCChHHHHHHHhhhcCCCCC--------ccccccCccccCHHHHHHHHHHhcCCCCc
Q psy9959         212 PHKCKYCESRFTTSGELVRHVRYKHTHEKP--------HKCSICDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       212 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~--------~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      .|.|..|++.|.....|.+|++..|.+.++        |.|..|++.|.....|..|+++|++++||
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   91 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSG   91 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCC
Confidence            356777777777777777777644666665        88888888888888888888888877774

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.2e-12  Score=80.38  Aligned_cols=44  Identities=30%  Similarity=0.376  Sum_probs=40.7

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.2e-12  Score=80.39  Aligned_cols=44  Identities=30%  Similarity=0.376  Sum_probs=40.7

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778888899999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.1e-12  Score=80.47  Aligned_cols=44  Identities=30%  Similarity=0.382  Sum_probs=40.6

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888899999999999999999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.4e-12  Score=80.07  Aligned_cols=44  Identities=25%  Similarity=0.317  Sum_probs=40.7

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.3e-12  Score=80.12  Aligned_cols=44  Identities=32%  Similarity=0.479  Sum_probs=40.6

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888899999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.4e-12  Score=80.03  Aligned_cols=44  Identities=34%  Similarity=0.468  Sum_probs=40.6

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36778888899999999999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.4e-12  Score=80.02  Aligned_cols=44  Identities=30%  Similarity=0.370  Sum_probs=40.6

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888899999999999999999999999999999999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.5e-12  Score=79.00  Aligned_cols=43  Identities=26%  Similarity=0.330  Sum_probs=39.9

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~  314 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            3677888889999999999999999999999999999999995

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.5e-12  Score=79.89  Aligned_cols=44  Identities=27%  Similarity=0.365  Sum_probs=40.7

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            36788888999999999999999999999999999999999973

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.6e-12  Score=79.74  Aligned_cols=44  Identities=36%  Similarity=0.616  Sum_probs=40.7

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.6e-12  Score=79.74  Aligned_cols=44  Identities=30%  Similarity=0.397  Sum_probs=40.6

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|.++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778888899999999999999999999999999999999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.5e-12  Score=79.07  Aligned_cols=43  Identities=26%  Similarity=0.216  Sum_probs=40.0

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~  314 (330)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3677888899999999999999999999999999999999995

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.3e-12  Score=79.37  Aligned_cols=43  Identities=26%  Similarity=0.275  Sum_probs=40.0

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~  314 (330)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3677888889999999999999999999999999999999995

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.4e-12  Score=80.08  Aligned_cols=44  Identities=32%  Similarity=0.403  Sum_probs=40.6

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            36778888899999999999999999999999999999999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.4e-12  Score=80.07  Aligned_cols=43  Identities=30%  Similarity=0.481  Sum_probs=40.1

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      |.++|.++++|.|.+|++.|.+...|.+|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            5678888899999999999999999999999999999999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.6e-12  Score=79.76  Aligned_cols=43  Identities=28%  Similarity=0.293  Sum_probs=40.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~  314 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4677888889999999999999999999999999999999997

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.5e-12  Score=79.94  Aligned_cols=44  Identities=27%  Similarity=0.378  Sum_probs=40.5

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888899999999999999999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.7e-12  Score=79.62  Aligned_cols=44  Identities=34%  Similarity=0.474  Sum_probs=40.6

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999973

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.8e-12  Score=79.55  Aligned_cols=44  Identities=32%  Similarity=0.419  Sum_probs=40.6

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999973

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1.9e-12  Score=78.63  Aligned_cols=43  Identities=21%  Similarity=0.260  Sum_probs=39.8

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~  314 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            3677888889999999999999999999999999999999995

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.4e-12  Score=80.08  Aligned_cols=44  Identities=34%  Similarity=0.425  Sum_probs=40.4

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36778888889999999999999999999999999999999974

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.28  E-value=2.3e-12  Score=77.37  Aligned_cols=41  Identities=20%  Similarity=0.263  Sum_probs=38.8

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccc
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC  313 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C  313 (330)
                      |.++|.++++|.|..|++.|.+.+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56788889999999999999999999999999999999998

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=2e-12  Score=77.69  Aligned_cols=41  Identities=34%  Similarity=0.511  Sum_probs=38.8

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccc
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC  313 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C  313 (330)
                      |.++|.++++|.|..|++.|.+.+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            66788889999999999999999999999999999999998

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.1e-12  Score=79.19  Aligned_cols=44  Identities=34%  Similarity=0.437  Sum_probs=40.6

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888899999999999999999999999999999999973

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=2.2e-12  Score=78.29  Aligned_cols=43  Identities=19%  Similarity=0.259  Sum_probs=40.0

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~  314 (330)
                      .|.++|.++++|.|..|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            3677888889999999999999999999999999999999995

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.6e-12  Score=78.09  Aligned_cols=41  Identities=32%  Similarity=0.479  Sum_probs=38.9

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccc
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC  313 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C  313 (330)
                      |+++|.++++|.|..|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            67788889999999999999999999999999999999998

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.5e-12  Score=86.72  Aligned_cols=59  Identities=19%  Similarity=0.479  Sum_probs=45.2

Q ss_pred             cCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc-ccCccccCHHHHHHHHHHhcCCCC
Q psy9959         208 TGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS-ICDYASVELSKMRNHMRSHTGERP  269 (330)
Q Consensus       208 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~-~C~k~f~~~~~L~~H~~~h~~~~~  269 (330)
                      .+.++|.|..|++.|. ...|..|+++  ++++||.|. .|++.|...+.|..|+++|...++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~--~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ--CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH--CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH--cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            4567788888888888 8888888774  677888888 788888888888888887765544

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.4e-12  Score=78.95  Aligned_cols=43  Identities=30%  Similarity=0.479  Sum_probs=39.9

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      |.++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5678888999999999999999999999999999999999963

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.7e-12  Score=77.89  Aligned_cols=41  Identities=39%  Similarity=0.563  Sum_probs=38.8

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccc
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC  313 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C  313 (330)
                      |.++|+++++|.|..|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            66788889999999999999999999999999999999998

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=3.7e-12  Score=77.32  Aligned_cols=42  Identities=14%  Similarity=0.162  Sum_probs=39.2

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccc
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~  314 (330)
                      |.++|.++++|.|..|++.|.+...|..|+++|++++||.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            567788889999999999999999999999999999999995

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=2.8e-12  Score=78.67  Aligned_cols=43  Identities=33%  Similarity=0.447  Sum_probs=40.1

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCC-CCCccccc
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTD-QKPYLCDH  315 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~-~~p~~C~~  315 (330)
                      |+++|.++++|.|..|++.|.+...|..|+++|++ ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67788889999999999999999999999999999 99999973

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.3e-12  Score=79.02  Aligned_cols=43  Identities=26%  Similarity=0.415  Sum_probs=40.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~  314 (330)
                      .|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677888899999999999999999999999999999999997

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.25  E-value=3.4e-12  Score=86.46  Aligned_cols=56  Identities=21%  Similarity=0.367  Sum_probs=51.1

Q ss_pred             cccCCCCccccCC--CccccCChHHHHHHHHHcCCCCCccccc--CChhhHhhhhHhhcC
Q psy9959         275 KSHEGEKCWKCEL--CPYASSSQRHLESHMLIHTDQKPYLCDH--CDQIRILICVIIAIR  330 (330)
Q Consensus       275 ~~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~~p~~C~~--C~~~f~~~~~l~~H~  330 (330)
                      ......++|.|..  |++.|.+...|..|+++|++++||.|++  |++.|.....|.+|.
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~   69 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR   69 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHT
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHh
Confidence            3456678899999  9999999999999999999999999975  999999999999985

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.9e-12  Score=79.41  Aligned_cols=43  Identities=26%  Similarity=0.272  Sum_probs=40.2

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~  314 (330)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677888899999999999999999999999999999999996

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.7e-12  Score=78.36  Aligned_cols=44  Identities=27%  Similarity=0.320  Sum_probs=41.0

Q ss_pred             eecccCCCCccccC--CCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         273 HCKSHEGEKCWKCE--LCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       273 h~~~~~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      |.++|+++++|.|.  .|++.|.+...|..|+++|++++||.|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678889999998  899999999999999999999999999988

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.8e-12  Score=77.64  Aligned_cols=43  Identities=26%  Similarity=0.367  Sum_probs=39.4

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      +.++|.++++|.|.+|++.|.+...|..|+++|++++||.|++
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            3467888899999999999999999999999999999999974

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.24  E-value=6.3e-12  Score=75.87  Aligned_cols=41  Identities=20%  Similarity=0.305  Sum_probs=38.1

Q ss_pred             cccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         275 KSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       275 ~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      ++|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            46788889999999999999999999999999999999974

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.24  E-value=8.8e-12  Score=84.37  Aligned_cols=57  Identities=30%  Similarity=0.626  Sum_probs=43.8

Q ss_pred             cCCCCCccccc--cCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCC--CccccCChHHHHHHHHHc
Q psy9959         236 HTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCEL--CPYASSSQRHLESHMLIH  305 (330)
Q Consensus       236 H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H  305 (330)
                      +...++|.|..  |++.|.....|..|+++|+++++             |.|.+  |++.|.+...|.+|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-------------~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP-------------FSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCS-------------EECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCC-------------ccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45667788877  88888888888888888877666             45854  888888888888887765

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=7e-12  Score=76.86  Aligned_cols=42  Identities=26%  Similarity=0.311  Sum_probs=38.9

Q ss_pred             ecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         274 CKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       274 ~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      .++|.++++|.|.+|++.|.+...|..|+++|++++||.|..
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            467888899999999999999999999999999999999973

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.23  E-value=7.3e-12  Score=76.73  Aligned_cols=45  Identities=36%  Similarity=0.521  Sum_probs=38.8

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRS-HTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGG-SSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            588888888888998899889888888888885 888888888877

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=6.7e-12  Score=76.14  Aligned_cols=43  Identities=23%  Similarity=0.187  Sum_probs=39.7

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~  314 (330)
                      .|+++|+++++|.|.+|++.|.+.+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            3677888899999999999999999999999999999999984

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=8.3e-12  Score=76.50  Aligned_cols=45  Identities=40%  Similarity=0.538  Sum_probs=38.7

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGG-TSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhh-cCCCCCCCCCCC
Confidence            578888888888888898888888888888885 888888888877

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.8e-12  Score=77.84  Aligned_cols=43  Identities=26%  Similarity=0.296  Sum_probs=39.8

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccc
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD  314 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~  314 (330)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677888889999999999999999999999999999999984

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=8.6e-12  Score=76.43  Aligned_cols=45  Identities=31%  Similarity=0.473  Sum_probs=39.2

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      +|+++|+++++|.|..|++.|.....|..|+++ |++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRI-HSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGG-GSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHH-hcCCCCCCCCCC
Confidence            588888888899999999999999999999885 888888998887

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.22  E-value=7.6e-12  Score=76.67  Aligned_cols=45  Identities=38%  Similarity=0.578  Sum_probs=39.4

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      +|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRV-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHH-HSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            588888888999999999999999999999885 888889998887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8.9e-12  Score=76.36  Aligned_cols=45  Identities=33%  Similarity=0.530  Sum_probs=38.9

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKI-HTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHH-TSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            588888888889999999999999999999885 888888988876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=9e-12  Score=76.33  Aligned_cols=45  Identities=38%  Similarity=0.527  Sum_probs=39.9

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMV-HTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHH-TTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            588889999999999999999999999999885 888999999887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=9.4e-12  Score=76.27  Aligned_cols=45  Identities=33%  Similarity=0.433  Sum_probs=38.1

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGG-TSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            478888888888888888888888888888885 888888888876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.22  E-value=8.5e-12  Score=76.43  Aligned_cols=45  Identities=29%  Similarity=0.414  Sum_probs=38.1

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|++. |+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNV-HVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGG-GSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHH-cCCCCCcCCCCC
Confidence            578888888888888888888888888888885 888888888877

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=9.5e-12  Score=76.21  Aligned_cols=45  Identities=40%  Similarity=0.530  Sum_probs=39.3

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTT-TCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhh-cCCCCCCCCCCC
Confidence            588888888999999999999999999999885 888889998887

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8.3e-12  Score=76.48  Aligned_cols=45  Identities=40%  Similarity=0.639  Sum_probs=39.3

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHH-HSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            588888888899999999999999999999885 888889998887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=8.7e-12  Score=76.41  Aligned_cols=45  Identities=33%  Similarity=0.486  Sum_probs=39.2

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTT-TSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            588888888899999999999999999999885 888889998887

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=9.5e-12  Score=76.23  Aligned_cols=45  Identities=38%  Similarity=0.509  Sum_probs=38.8

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTT-TCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            578888888889999999999988889999885 888888888877

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=9.3e-12  Score=76.26  Aligned_cols=45  Identities=36%  Similarity=0.507  Sum_probs=38.7

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|++. |++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHT-TSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            578888888888888888888888888888885 888888888877

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8.5e-12  Score=76.43  Aligned_cols=45  Identities=38%  Similarity=0.510  Sum_probs=38.2

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRI-HTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGG-GSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            578888888888888888888888888888885 888888888877

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1e-11  Score=76.10  Aligned_cols=45  Identities=44%  Similarity=0.647  Sum_probs=38.8

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGG-GCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            588888888888898898888888888888885 888888888887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=9e-12  Score=76.32  Aligned_cols=45  Identities=33%  Similarity=0.468  Sum_probs=38.7

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERL-HSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHH-CCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHh-cCCCCCCCCCCC
Confidence            578888888888888888888888888888885 888888888877

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6e-12  Score=77.15  Aligned_cols=45  Identities=24%  Similarity=0.440  Sum_probs=38.6

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKR-HFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHH-HHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHH-HcCCCCCCCCCC
Confidence            588888888888888888888888888888886 888888888877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=9.8e-12  Score=76.15  Aligned_cols=45  Identities=36%  Similarity=0.597  Sum_probs=38.7

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      +|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRI-HTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTT-TTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            578888888888888888888888888888885 888888888877

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.21  E-value=9.2e-12  Score=76.28  Aligned_cols=45  Identities=33%  Similarity=0.474  Sum_probs=38.2

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      +|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTG-GGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            578888888888888888888888888888885 888888888876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=9.2e-12  Score=76.28  Aligned_cols=45  Identities=31%  Similarity=0.485  Sum_probs=39.5

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRT-HAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHH-HTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHH-cCCCCCCCCCCC
Confidence            588888888999999999999999999999886 888899999887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=1.1e-11  Score=75.91  Aligned_cols=45  Identities=29%  Similarity=0.343  Sum_probs=39.2

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      +|+++|+++++|.|..|++.|.....|..|+++ |+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRV-HMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTT-TCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            588888888899999999999999999999885 888889998887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=1e-11  Score=75.32  Aligned_cols=44  Identities=32%  Similarity=0.523  Sum_probs=36.8

Q ss_pred             ccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       203 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      |+++|+++++|.|..|++.|.....|.+|+++ |+++++|.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQT-HAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHH-HTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            67788888888888888888888888888885 888888888876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1e-11  Score=76.08  Aligned_cols=45  Identities=31%  Similarity=0.440  Sum_probs=39.8

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRT-HVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHH-CCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            588889999999999999999999999999886 888899999887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1e-11  Score=76.03  Aligned_cols=45  Identities=33%  Similarity=0.409  Sum_probs=39.0

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKC-HTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHH-HSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            588888888889999999999999999999885 888888988887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.1e-11  Score=75.92  Aligned_cols=45  Identities=31%  Similarity=0.437  Sum_probs=39.2

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRI-HTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHH-HTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHH-cCCCCCCCCCCC
Confidence            588888888899999999999999999999885 888889998887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1e-11  Score=76.09  Aligned_cols=45  Identities=38%  Similarity=0.534  Sum_probs=39.0

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|++. |++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHH-HSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHH-HCCCCCCCCCCC
Confidence            588888888899999999999999999999885 888888988877

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=8.2e-12  Score=74.46  Aligned_cols=39  Identities=23%  Similarity=0.433  Sum_probs=36.7

Q ss_pred             cccCCCCccccCCCccccCChHHHHHHHHHcCCCCCccc
Q psy9959         275 KSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC  313 (330)
Q Consensus       275 ~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C  313 (330)
                      ++|+++++|.|..|++.|.+...|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            467888899999999999999999999999999999998

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.4e-12  Score=76.73  Aligned_cols=45  Identities=36%  Similarity=0.482  Sum_probs=38.1

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHH-HHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            578888888888888888888888888888885 788888888877

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.1e-11  Score=76.01  Aligned_cols=45  Identities=40%  Similarity=0.598  Sum_probs=36.5

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|++. |++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRV-HTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGG-GSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            577788888888888888888888888888875 778888888776

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.20  E-value=1.3e-11  Score=75.55  Aligned_cols=45  Identities=36%  Similarity=0.514  Sum_probs=38.3

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRV-HSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGG-GTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHH-hCCCCCCCCCCC
Confidence            578888888888888888888888888888885 888888888877

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.4e-11  Score=75.43  Aligned_cols=45  Identities=36%  Similarity=0.466  Sum_probs=38.1

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMV-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGG-GTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            478888888888888888888888888888885 888888888877

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.3e-11  Score=75.55  Aligned_cols=45  Identities=36%  Similarity=0.462  Sum_probs=37.8

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTT-TTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            477888888888888888888888888888885 888888888877

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.1e-11  Score=75.83  Aligned_cols=45  Identities=40%  Similarity=0.596  Sum_probs=38.3

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTT-TTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            578888888888888888888888888888885 888888888877

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.4e-11  Score=75.52  Aligned_cols=45  Identities=27%  Similarity=0.291  Sum_probs=37.2

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |++++||.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRV-HMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGG-GGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            477888888888888888888888888888885 788888888877

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.19  E-value=1.2e-11  Score=75.85  Aligned_cols=45  Identities=36%  Similarity=0.487  Sum_probs=38.9

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKL-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHH-HSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            478888888889999999999988889999885 888888988887

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=9e-12  Score=76.33  Aligned_cols=45  Identities=33%  Similarity=0.545  Sum_probs=37.7

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHH-HHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            578888888888888888888888888888885 778888888876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=9.9e-12  Score=76.14  Aligned_cols=45  Identities=36%  Similarity=0.506  Sum_probs=34.8

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRV-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGG-GSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            477777777788888888888888888888775 777778887776

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.6e-11  Score=75.16  Aligned_cols=45  Identities=31%  Similarity=0.493  Sum_probs=38.3

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|++. |++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRT-HSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTT-TCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHH-hCCCCCCCCCCC
Confidence            478888888888888888888888888888885 888888888877

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.4e-12  Score=76.46  Aligned_cols=45  Identities=40%  Similarity=0.544  Sum_probs=37.9

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRV-HTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHH-HHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            578888888888888888888888888888885 788888888877

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.4e-11  Score=75.40  Aligned_cols=45  Identities=31%  Similarity=0.445  Sum_probs=38.0

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|..|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKV-HTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTT-SCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHh-hCCCCCCCCCCC
Confidence            478888888888888888888888888888885 888888888877

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.7e-11  Score=75.10  Aligned_cols=45  Identities=36%  Similarity=0.525  Sum_probs=38.0

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      +|+++|+++++|.|..|++.|.....|.+|++. |++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTT-TTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            578888888888888888888888888888885 888888888765

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.18  E-value=1.9e-11  Score=74.88  Aligned_cols=45  Identities=38%  Similarity=0.563  Sum_probs=37.8

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |+++++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRM-HTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGG-GCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            477888888888888888888888888888885 888888888877

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.8e-11  Score=74.90  Aligned_cols=45  Identities=33%  Similarity=0.495  Sum_probs=39.0

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|..|++. |++++||.|..|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRS-HSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHH-SCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHH-hCCCCCCCCCCC
Confidence            478888888899999999999999999999885 888888998887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.4e-11  Score=75.48  Aligned_cols=45  Identities=33%  Similarity=0.465  Sum_probs=38.5

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |++++||.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRT-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHH-HSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHH-cCCCCCCCCCCC
Confidence            578888888888888888888888888888885 888888888877

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.6e-11  Score=75.19  Aligned_cols=45  Identities=22%  Similarity=0.288  Sum_probs=38.5

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVL-HMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHH-HSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            478888888888888888888888888888885 888888888877

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.9e-11  Score=75.13  Aligned_cols=46  Identities=39%  Similarity=0.572  Sum_probs=38.7

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|..|++..|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4788888888889988999998888888888823888888888877

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.16  E-value=3.5e-11  Score=76.44  Aligned_cols=48  Identities=29%  Similarity=0.565  Sum_probs=39.1

Q ss_pred             cccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccC
Q psy9959         206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVE  253 (330)
Q Consensus       206 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~  253 (330)
                      .|.++++|.|..|++.|.....|.+|++..|+++++|.|..|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            467778888888888888888888888634888888888888888865

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.6e-11  Score=75.19  Aligned_cols=45  Identities=31%  Similarity=0.471  Sum_probs=36.8

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|++. |++++||.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRL-HTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHH-HHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            477788888888888888888888888888875 778888888876

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.15  E-value=4.6e-12  Score=80.62  Aligned_cols=52  Identities=17%  Similarity=0.272  Sum_probs=44.7

Q ss_pred             CccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcc
Q psy9959         248 DYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYL  312 (330)
Q Consensus       248 ~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~  312 (330)
                      ++.|.....|..|+++|+++++             |.|..||+.|.+.+.|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~-------------~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQP-------------ATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCC-------------EECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCC-------------ccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4567777778888888877766             579999999999999999999999999984

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.14  E-value=3.7e-12  Score=83.59  Aligned_cols=53  Identities=19%  Similarity=0.307  Sum_probs=42.8

Q ss_pred             hhhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHH
Q psy9959         200 LQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSK  256 (330)
Q Consensus       200 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~  256 (330)
                      |..|+++|++++||.|+.|++.|.....|.   + .|+++++|.|..||+.|....+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~-~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---L-FDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---H-EETTTTEEBCSSSCCBCEECTT
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---h-hcCCCCCEECCCCCCccccCcc
Confidence            567888888888888988988888877775   4 4888888899999888876543

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.3e-11  Score=74.48  Aligned_cols=45  Identities=31%  Similarity=0.348  Sum_probs=37.2

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |+++++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRV-HTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHH-HHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHH-HcCCCCCCCCCC
Confidence            477788888888888888888888888888885 788888888877

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.9e-11  Score=73.42  Aligned_cols=45  Identities=38%  Similarity=0.551  Sum_probs=37.7

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      .|+++|+++++|.|..|++.|.....|..|++. |++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHH-HCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            478888888888888888888888888888885 888888888765

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.10  E-value=8.3e-11  Score=70.35  Aligned_cols=42  Identities=24%  Similarity=0.472  Sum_probs=32.4

Q ss_pred             ccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       203 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      |+++|+++++|.|..|++.|.....|.+|+++ |+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRT-HAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGG-GCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHh-cCCCCCCCCC
Confidence            56777777888888888888888888888775 7777777774

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.10  E-value=1.9e-11  Score=77.74  Aligned_cols=50  Identities=18%  Similarity=0.278  Sum_probs=29.5

Q ss_pred             cccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCc
Q psy9959         220 SRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       220 ~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      +.|.....|..|++. |+++++|.|..|++.|...+.|..|+++|++++||
T Consensus         4 k~~~~~~~l~~h~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSR-SQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHH-HTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHh-cCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            445555555556553 55666666666666666666666666666665554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.9e-11  Score=71.77  Aligned_cols=44  Identities=32%  Similarity=0.480  Sum_probs=35.9

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTT-TSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            577888888888888888888888888888875 88888888863

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.7e-11  Score=71.81  Aligned_cols=44  Identities=43%  Similarity=0.589  Sum_probs=35.2

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTT-TTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHh-hCCCCCCCCCC
Confidence            577788888888888888888888888888875 77888888763

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1e-10  Score=71.52  Aligned_cols=44  Identities=39%  Similarity=0.534  Sum_probs=35.9

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGG-TSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHh-cCCCCCcCCCC
Confidence            577888888888888888888888888888875 88888888863

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.08  E-value=8.2e-11  Score=71.94  Aligned_cols=44  Identities=39%  Similarity=0.587  Sum_probs=34.8

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHH-HTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            477788888888888888888888888888875 77888888763

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=9.4e-11  Score=71.66  Aligned_cols=44  Identities=39%  Similarity=0.598  Sum_probs=35.9

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRV-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGG-GCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCCCCCC
Confidence            577888888888888888888888888888875 88888888863

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.1e-10  Score=69.82  Aligned_cols=42  Identities=26%  Similarity=0.510  Sum_probs=29.8

Q ss_pred             ccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       203 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      |+++|+++++|.|..|++.|.....|.+|+++ |+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKM-HTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHH-TSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHH-hCCCCCCCCC
Confidence            56667777777777777777777777777764 7777777763

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.1e-10  Score=71.43  Aligned_cols=43  Identities=40%  Similarity=0.632  Sum_probs=35.7

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      +|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRV-HTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGG-GTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHh-cCCCCCCCCC
Confidence            578888888888888888888888888888875 8888888886

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.1e-10  Score=71.41  Aligned_cols=44  Identities=39%  Similarity=0.600  Sum_probs=35.6

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRT-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHT-SCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            577888888888888888888888888888875 88888888763

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=9.1e-11  Score=71.70  Aligned_cols=44  Identities=34%  Similarity=0.486  Sum_probs=34.9

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|.+|++. |++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQAT-HSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHH-HCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHH-cCCCCCCCCCC
Confidence            577788888888888888888888888888875 77888888763

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=9.4e-11  Score=71.65  Aligned_cols=44  Identities=39%  Similarity=0.591  Sum_probs=35.1

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKT-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHH-HCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            577788888888888888888888888888875 77888888763

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1e-10  Score=71.44  Aligned_cols=44  Identities=34%  Similarity=0.500  Sum_probs=35.7

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRI-HTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGG-GSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            577888888888888888888888888888875 88888888863

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.2e-10  Score=71.15  Aligned_cols=44  Identities=30%  Similarity=0.422  Sum_probs=36.4

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|.+|++. |+++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRI-HRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGG-GCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhH-hCCCCCCCCCC
Confidence            578888888888888888888888888888885 88888888863

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=9.3e-11  Score=71.70  Aligned_cols=43  Identities=37%  Similarity=0.561  Sum_probs=34.5

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRS-HTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHH-HSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHh-cCCCCCCCCC
Confidence            477788888888888888888888888888875 7788888876

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=9.6e-11  Score=71.61  Aligned_cols=44  Identities=41%  Similarity=0.564  Sum_probs=35.2

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTT-TSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHh-cCCCCCCCCCC
Confidence            477788888888888888888888888888875 77888888763

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.1e-10  Score=71.35  Aligned_cols=44  Identities=36%  Similarity=0.485  Sum_probs=35.0

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRV-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTT-TSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCCCCCC
Confidence            477788888888888888888888888888775 77888888763

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.2e-10  Score=71.21  Aligned_cols=44  Identities=36%  Similarity=0.563  Sum_probs=35.9

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTT-TSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHH-cCCCCCCCCCC
Confidence            577888888888888888888888888888875 78888888863

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.2e-10  Score=71.22  Aligned_cols=44  Identities=32%  Similarity=0.498  Sum_probs=35.8

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|.+|++. |+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKI-HTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTT-TSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            477888888888888888888888888888875 88888888863

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.1e-10  Score=71.37  Aligned_cols=44  Identities=36%  Similarity=0.513  Sum_probs=36.2

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|.+|++. |++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTT-TCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            578888888888888888888888888888885 88888888863

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.06  E-value=1.1e-10  Score=75.92  Aligned_cols=40  Identities=20%  Similarity=0.316  Sum_probs=35.8

Q ss_pred             ccCCCCccccCC--CccccCChHHHHHHH-HHcCCCCCccccc
Q psy9959         276 SHEGEKCWKCEL--CPYASSSQRHLESHM-LIHTDQKPYLCDH  315 (330)
Q Consensus       276 ~~~~~k~~~C~~--C~~~F~~~~~L~~H~-~~H~~~~p~~C~~  315 (330)
                      .++++|||+|..  |+++|.+.++|.+|+ ++|++++||.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            457889999976  999999999999998 6899999999954

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.3e-10  Score=71.04  Aligned_cols=44  Identities=39%  Similarity=0.530  Sum_probs=34.7

Q ss_pred             ccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       203 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      ++++|+++++|.|..|++.|.....|.+|++. |+++++|.|..|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTT-TSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHH-hCCCCCCCCCCC
Confidence            45677788888888888888888888888775 778888888776

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1.3e-10  Score=70.24  Aligned_cols=43  Identities=28%  Similarity=0.502  Sum_probs=34.9

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      +|+++|+++++|.|..|++.|.....|..|+++ |+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERT-HARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHH-CCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHh-cCCCCCCCCC
Confidence            577888888888888888888888888888875 7888888874

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.3e-10  Score=70.28  Aligned_cols=43  Identities=30%  Similarity=0.488  Sum_probs=34.9

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRT-HTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTT-TCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhh-cCCCCCCCCC
Confidence            577888888888888888888888888888875 7888888874

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.3e-10  Score=70.18  Aligned_cols=43  Identities=33%  Similarity=0.524  Sum_probs=33.5

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRT-HTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHH-TTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHH-hCCCCCCCCC
Confidence            477778888888888888888888888888775 7777787774

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.4e-10  Score=70.06  Aligned_cols=43  Identities=16%  Similarity=0.334  Sum_probs=35.8

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKT-HAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGG-GCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHH-cCCCCCcCCC
Confidence            578888888888888888888888888888885 8888888874

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.1e-10  Score=70.57  Aligned_cols=43  Identities=23%  Similarity=0.428  Sum_probs=34.1

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKT-HSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTT-SSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHH-cCCCCCCCCC
Confidence            477788888888888888888888888888875 7778888774

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.2e-10  Score=71.11  Aligned_cols=43  Identities=35%  Similarity=0.451  Sum_probs=35.4

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      +|+++|+++++|.|..|++.|.....|.+|+++ |+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS-HTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHH-HTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHH-cCCCCCCCCC
Confidence            577888888888888888888888888888875 7888888876

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.05  E-value=1.1e-10  Score=68.68  Aligned_cols=37  Identities=22%  Similarity=0.413  Sum_probs=33.7

Q ss_pred             cCCCCccccCCCccccCChHHHHHHHHHcCCCCCccc
Q psy9959         277 HEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLC  313 (330)
Q Consensus       277 ~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C  313 (330)
                      |+++++|.|..|++.|.+.+.|..|+++|++++||.|
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4567789999999999999999999999999999986

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.5e-10  Score=70.70  Aligned_cols=44  Identities=36%  Similarity=0.574  Sum_probs=34.7

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |+++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSV-HSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTT-TTSCCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHh-cCCCCCCCCCC
Confidence            367778888888888888888888888888875 77888888763

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=71.16  Aligned_cols=43  Identities=35%  Similarity=0.519  Sum_probs=33.2

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      +|+++|+++++|.|..|++.|.....|.+|+++ |+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRV-HTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHH-HSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHH-hCCCCCCCCC
Confidence            477777777888888888888888888888775 7777777775

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.5e-10  Score=70.80  Aligned_cols=44  Identities=39%  Similarity=0.525  Sum_probs=33.2

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHH-HTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHH-cCCCCCCCCCC
Confidence            467777777778888888888877778888775 77777777753

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.7e-10  Score=70.55  Aligned_cols=43  Identities=35%  Similarity=0.556  Sum_probs=33.7

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRV-HTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHH-CSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHH-hCCCCCCCCC
Confidence            377778888888888888888888888888775 7778888775

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=1.9e-10  Score=69.89  Aligned_cols=35  Identities=31%  Similarity=0.567  Sum_probs=24.4

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcCCCCc
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      |+++++|.|..|++.|.....|..|+++|+++++|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~   39 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK   39 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCC
Confidence            66677777777777777777777777777666553

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=69.55  Aligned_cols=41  Identities=32%  Similarity=0.651  Sum_probs=28.2

Q ss_pred             ccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccc
Q psy9959         203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKC  244 (330)
Q Consensus       203 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  244 (330)
                      |+++|+++++|.|..|++.|.....|..|+++ |++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRV-HTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGG-TSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHH-hCCCCCCCC
Confidence            66666677777777777777777777777664 666666665

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.2e-10  Score=71.21  Aligned_cols=43  Identities=37%  Similarity=0.570  Sum_probs=32.2

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      .|+++|+++++|.|..|++.|.....|.+|+++ |++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRI-HTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHH-HHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHh-cCCCCCCCCC
Confidence            467777777777777777777777777777775 7777777775

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.7e-10  Score=70.40  Aligned_cols=43  Identities=33%  Similarity=0.526  Sum_probs=34.3

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      .|+++|+++++|.|..|++.|.....|.+|++. |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAI-HTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTT-SCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHH-hCCCCCCCCC
Confidence            477788888888888888888888888888875 7788888875

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=2e-10  Score=70.19  Aligned_cols=44  Identities=32%  Similarity=0.374  Sum_probs=36.4

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCC-CCCccccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTH-EKPHKCSI  246 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~-~~~~~C~~  246 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |++ +++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERI-HTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTT-CCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            478888888888888888888888888888875 888 88888863

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=2.2e-10  Score=70.74  Aligned_cols=42  Identities=26%  Similarity=0.304  Sum_probs=27.3

Q ss_pred             ccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCc
Q psy9959         207 HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDY  249 (330)
Q Consensus       207 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k  249 (330)
                      |.++++|.|.+|++.|.....|.+|+++ |+++++|.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLS-HSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGG-SCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHh-cCCCCCccCCCCCC
Confidence            4555666666666666666666666664 66666666666664

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=2.3e-10  Score=68.43  Aligned_cols=41  Identities=32%  Similarity=0.562  Sum_probs=30.1

Q ss_pred             ccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccc
Q psy9959         203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKC  244 (330)
Q Consensus       203 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  244 (330)
                      |+++|+++++|.|..|++.|.....|..|++. |++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRI-HTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTT-TSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHh-cCCCCCCCC
Confidence            66677777777777777777777777777774 777777766

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.01  E-value=2.8e-10  Score=67.95  Aligned_cols=41  Identities=27%  Similarity=0.468  Sum_probs=27.1

Q ss_pred             ccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccc
Q psy9959         203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKC  244 (330)
Q Consensus       203 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  244 (330)
                      |+++|+++++|.|..|++.|.....|..|+++ |++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~-H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRS-CSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHH-TTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhh-cCCCCCCCC
Confidence            55666666666666666666666666666664 666666665

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.8e-10  Score=69.48  Aligned_cols=43  Identities=35%  Similarity=0.598  Sum_probs=34.8

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      .|+++|+++++|.|.+|++.|.....|.+|++. |++++||.|+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRV-HSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGG-SCCSCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHH-hCCCCCCCCC
Confidence            467778888888888888888888888888875 7888888875

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=3.9e-11  Score=81.75  Aligned_cols=67  Identities=15%  Similarity=0.288  Sum_probs=58.6

Q ss_pred             hhhhhccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCC
Q psy9959         198 ASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       198 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      ..|..|++.|.+.+++.|..|++.|. ...|..|+ . |.++++|.|+.|++.|. ...|..|+++|.+++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~-~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-D-YCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-H-HHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-h-HcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            46888999999999999999999994 88899998 4 88999999999999887 589999999988764

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.9e-10  Score=68.72  Aligned_cols=41  Identities=34%  Similarity=0.561  Sum_probs=24.8

Q ss_pred             ccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccc
Q psy9959         203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKC  244 (330)
Q Consensus       203 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  244 (330)
                      |+++|+++++|.|..|++.|.....|..|++. |++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLI-HTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHH-HHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHH-cCCCCCCCC
Confidence            55556666666666666666666666666653 556666655

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.5e-10  Score=70.78  Aligned_cols=43  Identities=35%  Similarity=0.457  Sum_probs=30.3

Q ss_pred             cccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         204 INTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       204 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      +++|+++++|.|..|++.|.....|..|+++ |+++++|.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWIT-HTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTH-HHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            4566677777777777777777777777765 667777777766

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.7e-10  Score=69.75  Aligned_cols=43  Identities=26%  Similarity=0.366  Sum_probs=31.5

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKI-HTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHH-HCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHH-hCCCCCCCCC
Confidence            467777777777777777777777777777775 7777777763

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.5e-10  Score=70.79  Aligned_cols=43  Identities=35%  Similarity=0.569  Sum_probs=32.9

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRS-HERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHH-HHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHH-hCCCCCCCCC
Confidence            477777777788888888888877778888775 7777777775

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.7e-10  Score=70.51  Aligned_cols=43  Identities=30%  Similarity=0.553  Sum_probs=30.0

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |+++++|.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRL-HSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHH-HHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHH-hCCCCCCCCC
Confidence            466677777777777777777777777777764 6666777765

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.7e-10  Score=67.77  Aligned_cols=42  Identities=24%  Similarity=0.370  Sum_probs=30.9

Q ss_pred             hccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCccc
Q psy9959         202 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKC  244 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  244 (330)
                      .|+++|+++++|.|..|++.|.....|..|+++ |++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERT-HAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGG-GSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhH-hcCCCCCCC
Confidence            467777777777777777777777777777774 777777765

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.4e-10  Score=65.52  Aligned_cols=36  Identities=19%  Similarity=0.431  Sum_probs=33.1

Q ss_pred             cccCCCCccccCCCccccCChHHHHHHHHHcCCCCC
Q psy9959         275 KSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKP  310 (330)
Q Consensus       275 ~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p  310 (330)
                      ++|+++++|.|..|++.|.+...|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            467888889999999999999999999999999875

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=4.3e-10  Score=67.93  Aligned_cols=42  Identities=19%  Similarity=0.320  Sum_probs=29.0

Q ss_pred             ccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       203 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      |+++|+++++|.|..|++.|.....|..|+++ |+++++|.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQAL-HAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHH-HTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHH-HCCCCCCCCC
Confidence            56666777777777777777777777777764 6667777663

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=5.9e-10  Score=68.63  Aligned_cols=44  Identities=41%  Similarity=0.540  Sum_probs=36.3

Q ss_pred             ccccccCcCceecC--ccccccCChHHHHHHHhhhcCCCCCcccccc
Q psy9959         203 HINTHTGVKPHKCK--YCESRFTTSGELVRHVRYKHTHEKPHKCSIC  247 (330)
Q Consensus       203 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  247 (330)
                      |.++|+++++|.|.  .|++.|.....|..|+++ |++++||.|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS-HSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTT-SCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            56778888888887  788888888888888885 888888888877

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.95  E-value=5.7e-10  Score=63.62  Aligned_cols=35  Identities=23%  Similarity=0.324  Sum_probs=31.8

Q ss_pred             ccCCCCccccCCCccccCChHHHHHHHHHcCCCCC
Q psy9959         276 SHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKP  310 (330)
Q Consensus       276 ~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p  310 (330)
                      +|.++++|.|..|++.|.+.+.|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            36678889999999999999999999999999875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.94  E-value=5.4e-10  Score=62.96  Aligned_cols=33  Identities=21%  Similarity=0.308  Sum_probs=30.6

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCCCccc
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQKPYLC  313 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C  313 (330)
                      ++|.|..||+.|.+.+.|..|+++|++++||.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            468999999999999999999999999999864

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.93  E-value=6.9e-10  Score=63.30  Aligned_cols=35  Identities=23%  Similarity=0.534  Sum_probs=31.9

Q ss_pred             ccCCCCccccCCCccccCChHHHHHHHHHcCCCCC
Q psy9959         276 SHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKP  310 (330)
Q Consensus       276 ~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p  310 (330)
                      +|.++++|.|..|++.|.+...|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            36778889999999999999999999999999875

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.93  E-value=7.4e-10  Score=64.05  Aligned_cols=36  Identities=25%  Similarity=0.325  Sum_probs=32.9

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCCC
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      |.++|+++++|.|+.|++.|.+...|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            667888888999999999999999999999999874

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=2.9e-10  Score=77.39  Aligned_cols=57  Identities=16%  Similarity=0.204  Sum_probs=50.4

Q ss_pred             ceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhHhhhhHhhc
Q psy9959         270 YQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAI  329 (330)
Q Consensus       270 ~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H  329 (330)
                      +..|..++.+.++|.|..|++.|. ...|..|+ .|.+++||.|+.|++.|. ...|..|
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H   61 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTH   61 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTH
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHH
Confidence            446777788888999999999995 99999999 899999999999999987 4888877

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=9.9e-10  Score=67.01  Aligned_cols=41  Identities=32%  Similarity=0.562  Sum_probs=27.5

Q ss_pred             cccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         204 INTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       204 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      +++|+++++|.|..|++.|.....|..|++. |++++||.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRI-HTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHH-HSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHH-hCCCCCCCCC
Confidence            4556666677777777777777777777664 6666666664

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.90  E-value=1.1e-10  Score=82.13  Aligned_cols=49  Identities=18%  Similarity=0.308  Sum_probs=43.6

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccCChhh
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIR  320 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f  320 (330)
                      .+.++|+++++|.|..|++.|.+...|..|+++|++++||.|..|.+..
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~~   63 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRK   63 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCCC
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhHH
Confidence            3456788899999999999999999999999999999999999887543

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.1e-09  Score=66.48  Aligned_cols=42  Identities=40%  Similarity=0.644  Sum_probs=29.8

Q ss_pred             ccccccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       203 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      +.++|+++++|.|..|++.|.....|..|+++ |+++++|.|+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRI-HTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTT-TSSCCCCCSC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHH-hCCCCCCCCC
Confidence            44566777777777777777777777777764 7777777775

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.86  E-value=1.8e-09  Score=64.80  Aligned_cols=39  Identities=26%  Similarity=0.456  Sum_probs=23.6

Q ss_pred             cccCcCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       206 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      +|+++++|.|..|++.|.....|.+|++. |++++||.|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQ-THSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHH-HTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHh-hCCCCCccCC
Confidence            45556666666666666666666666654 5566666654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.7e-09  Score=62.77  Aligned_cols=33  Identities=27%  Similarity=0.554  Sum_probs=29.9

Q ss_pred             ccCCCCccccCC--CccccCChHHHHHHHHHcCCC
Q psy9959         276 SHEGEKCWKCEL--CPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       276 ~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      .+.+++||+|..  |+++|.+++.|.+|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            457788899986  999999999999999999986

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2.6e-09  Score=63.28  Aligned_cols=38  Identities=29%  Similarity=0.539  Sum_probs=22.4

Q ss_pred             cccCcCceecCccccccCChHHHHHHHhhhcCCCCCccc
Q psy9959         206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKC  244 (330)
Q Consensus       206 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  244 (330)
                      +|+++++|.|..|++.|.....|..|+++ |++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERI-HTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGG-CCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHH-hCCCCCcCC
Confidence            45555666666666666666666666553 555566555

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=3.8e-09  Score=60.55  Aligned_cols=34  Identities=41%  Similarity=0.725  Sum_probs=31.0

Q ss_pred             ccCCCCccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         276 SHEGEKCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       276 ~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      .|.++++|.|..|++.|.+...|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            5778888999999999999999999999998864

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=2.3e-09  Score=62.31  Aligned_cols=36  Identities=19%  Similarity=0.274  Sum_probs=32.3

Q ss_pred             cCCCCccccC--CCccccCChHHHHHHHHHcCCCCCcc
Q psy9959         277 HEGEKCWKCE--LCPYASSSQRHLESHMLIHTDQKPYL  312 (330)
Q Consensus       277 ~~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~p~~  312 (330)
                      |+++++|.|.  .|++.|.+.+.|.+|+++|++++||.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            4567889999  59999999999999999999999873

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=3e-09  Score=60.98  Aligned_cols=34  Identities=24%  Similarity=0.476  Sum_probs=30.9

Q ss_pred             ccCCCCccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         276 SHEGEKCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       276 ~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      .|.++++|.|..|++.|.+.+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            5678888999999999999999999999998864

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=3.8e-09  Score=60.52  Aligned_cols=34  Identities=38%  Similarity=0.638  Sum_probs=31.1

Q ss_pred             ccCCCCccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         276 SHEGEKCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       276 ~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      +|.++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            5778888999999999999999999999999864

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=2.8e-09  Score=61.57  Aligned_cols=35  Identities=23%  Similarity=0.456  Sum_probs=31.4

Q ss_pred             cccCCCCccccCCCccccCCh-HHHHHHHHHcCCCC
Q psy9959         275 KSHEGEKCWKCELCPYASSSQ-RHLESHMLIHTDQK  309 (330)
Q Consensus       275 ~~~~~~k~~~C~~C~~~F~~~-~~L~~H~~~H~~~~  309 (330)
                      ++|.++++|.|..|++.|.+. +.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            467788889999999999999 99999999998864

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.77  E-value=2.9e-09  Score=60.79  Aligned_cols=33  Identities=33%  Similarity=0.504  Sum_probs=29.3

Q ss_pred             cCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccC
Q psy9959         277 HEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHC  316 (330)
Q Consensus       277 ~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C  316 (330)
                      +.+++||.|..||++|.+.++|.+|+       ||.|...
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~r   35 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSHR   35 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTTC
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcCC
Confidence            56788899999999999999999998       7888753

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=6.1e-09  Score=59.61  Aligned_cols=34  Identities=32%  Similarity=0.504  Sum_probs=31.0

Q ss_pred             ccCCCCccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         276 SHEGEKCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       276 ~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      +|.++++|.|..|++.|.+...|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4678888999999999999999999999999864

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.76  E-value=2.3e-10  Score=80.42  Aligned_cols=55  Identities=15%  Similarity=0.238  Sum_probs=34.7

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      |+++++|.|..|++.|.....|..|+++|++++|             |+|..|.    ....|..|.++|.+
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp-------------~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ-------------KRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHH-------------HHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCC-------------cccchhh----hHHHHHhhhccccc
Confidence            6666777777777777777777777777666555             3565443    34455566666655

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.76  E-value=4.5e-09  Score=61.49  Aligned_cols=35  Identities=20%  Similarity=0.349  Sum_probs=23.9

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcCCCCc
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      |+++++|.|..|++.|...+.|..|+++|++++||
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   35 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   35 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccc
Confidence            45666777777777777777777777777666665

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.75  E-value=7.7e-09  Score=58.71  Aligned_cols=34  Identities=21%  Similarity=0.393  Sum_probs=27.7

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcCCCC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERP  269 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~  269 (330)
                      |+++++|.|..|++.|...+.|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            6778888888888888888888888888887654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=6.2e-09  Score=60.12  Aligned_cols=34  Identities=24%  Similarity=0.503  Sum_probs=30.8

Q ss_pred             cccCCCCccccCCCccccCChHHHHHH-HHHcCCC
Q psy9959         275 KSHEGEKCWKCELCPYASSSQRHLESH-MLIHTDQ  308 (330)
Q Consensus       275 ~~~~~~k~~~C~~C~~~F~~~~~L~~H-~~~H~~~  308 (330)
                      ++|+++++|+|..|++.|.+.+.|..| +++|++.
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            467888899999999999999999999 8999874

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=9.1e-09  Score=59.28  Aligned_cols=34  Identities=15%  Similarity=0.412  Sum_probs=28.3

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcCCCC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERP  269 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~  269 (330)
                      |+++++|.|..|++.|.....|..|+++|++++|
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            7788888888888888888888888888887764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=7.9e-09  Score=59.17  Aligned_cols=34  Identities=32%  Similarity=0.584  Sum_probs=30.6

Q ss_pred             ccCCCCccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         276 SHEGEKCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       276 ~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      .|.++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4567788999999999999999999999999864

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.70  E-value=6.9e-09  Score=59.81  Aligned_cols=31  Identities=26%  Similarity=0.395  Sum_probs=17.3

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~  266 (330)
                      |++++||.|+.|++.|.....|..|+++|++
T Consensus         6 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            6 STGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            5555555555555555555555555555544

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.69  E-value=9.2e-09  Score=58.45  Aligned_cols=34  Identities=24%  Similarity=0.450  Sum_probs=24.2

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcCCCC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERP  269 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~  269 (330)
                      |+++++|.|..|++.|.....|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5667777777777777777777777777766653

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.6e-08  Score=58.60  Aligned_cols=32  Identities=28%  Similarity=0.570  Sum_probs=27.4

Q ss_pred             cCCCCCccccc--cCccccCHHHHHHHHHHhcCC
Q psy9959         236 HTHEKPHKCSI--CDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       236 H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      +++++||+|..  |++.|...+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            67888999986  999999999999999988875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.68  E-value=8.6e-09  Score=63.40  Aligned_cols=35  Identities=17%  Similarity=0.414  Sum_probs=29.1

Q ss_pred             ccCCCCccccCCCccccCChHHHHHHHH-HcCCCCC
Q psy9959         276 SHEGEKCWKCELCPYASSSQRHLESHML-IHTDQKP  310 (330)
Q Consensus       276 ~~~~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~~p  310 (330)
                      +|+++++|.|.+|++.|.+...|..|++ +|+++.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4677888999999999999999999999 9998754

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.67  E-value=7.5e-10  Score=61.85  Aligned_cols=31  Identities=16%  Similarity=0.248  Sum_probs=29.2

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCCCc
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQKPY  311 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~  311 (330)
                      ++|.|..|++.|.+.+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4689999999999999999999999999987

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.66  E-value=2e-08  Score=56.31  Aligned_cols=31  Identities=13%  Similarity=0.178  Sum_probs=26.3

Q ss_pred             CCccccccCccccCHHHHHHHHHHhcCCCCc
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      +||.|..|++.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            4788888888888888888888888888876

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.64  E-value=2.2e-08  Score=65.14  Aligned_cols=34  Identities=21%  Similarity=0.314  Sum_probs=14.3

Q ss_pred             CCCCCccccc--cCccccCHHHHHHHH-HHhcCCCCc
Q psy9959         237 THEKPHKCSI--CDYASVELSKMRNHM-RSHTGERPY  270 (330)
Q Consensus       237 ~~~~~~~C~~--C~k~f~~~~~L~~H~-~~h~~~~~~  270 (330)
                      ++++||+|.+  |+++|...+.|..|+ ++|++++||
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~   59 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPA   59 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCc
Confidence            3444444432  444444444444443 234444443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=2.7e-08  Score=57.66  Aligned_cols=35  Identities=17%  Similarity=0.344  Sum_probs=29.6

Q ss_pred             cCCCCCcccc--ccCccccCHHHHHHHHHHhcCCCCc
Q psy9959         236 HTHEKPHKCS--ICDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       236 H~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      |+++++|.|.  .|++.|...+.|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5678888898  5999999999999999888888775

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=3.2e-08  Score=64.95  Aligned_cols=41  Identities=17%  Similarity=0.190  Sum_probs=34.5

Q ss_pred             ccCCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccCC
Q psy9959         276 SHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCD  317 (330)
Q Consensus       276 ~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~  317 (330)
                      .+.++++|.|..|++.|.+...|.+|+++|++.. ..|.+++
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            4667889999999999999999999999999874 4555554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.61  E-value=1.8e-08  Score=58.09  Aligned_cols=33  Identities=24%  Similarity=0.470  Sum_probs=29.7

Q ss_pred             cCCCCccccCC--CccccCChHHHHHHHHHcCCCC
Q psy9959         277 HEGEKCWKCEL--CPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       277 ~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      |+++++|.|.+  |++.|.+.+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            66788899995  9999999999999999999864

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=3.6e-08  Score=56.25  Aligned_cols=34  Identities=41%  Similarity=0.769  Sum_probs=27.6

Q ss_pred             hcCCCCCccccccCccccCHHHHHHHHHHhcCCC
Q psy9959         235 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       235 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      .|+++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            3778888888888888888888888888887653

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.59  E-value=3e-08  Score=53.84  Aligned_cols=30  Identities=23%  Similarity=0.419  Sum_probs=27.2

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      +++|.|..|++.|.+...|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            367899999999999999999999998864

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=4.2e-08  Score=56.02  Aligned_cols=32  Identities=41%  Similarity=0.834  Sum_probs=25.5

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcCC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      |+++++|.|..|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            67778888888888888888888888887765

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.57  E-value=4e-08  Score=52.94  Aligned_cols=29  Identities=38%  Similarity=0.729  Sum_probs=26.5

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      ++|.|..|++.|.+...|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            46899999999999999999999998864

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=6e-08  Score=55.29  Aligned_cols=34  Identities=21%  Similarity=0.408  Sum_probs=28.5

Q ss_pred             hcCCCCCccccccCccccCHHHHHHHHHHhcCCC
Q psy9959         235 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       235 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      .|+++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            3778888999999999999999999988888763

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.56  E-value=2.7e-08  Score=53.67  Aligned_cols=29  Identities=31%  Similarity=0.625  Sum_probs=26.5

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      ++|.|..|++.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            46899999999999999999999998864

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.55  E-value=4.3e-08  Score=53.19  Aligned_cols=30  Identities=20%  Similarity=0.638  Sum_probs=27.3

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCCC
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQKP  310 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p  310 (330)
                      ++|.|..|++.|.+.+.|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            468999999999999999999999998764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=6.4e-08  Score=55.23  Aligned_cols=33  Identities=24%  Similarity=0.432  Sum_probs=27.5

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcCCC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      |.++++|.|..|++.|.....|..|+++|++++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            677888888888888888888888888887753

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=3.8e-08  Score=56.22  Aligned_cols=32  Identities=19%  Similarity=0.251  Sum_probs=22.1

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcCC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      |+++++|.|..|++.|...+.|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            56666777777777777777777777766654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.53  E-value=2e-08  Score=61.35  Aligned_cols=37  Identities=16%  Similarity=0.367  Sum_probs=32.2

Q ss_pred             eecccCCCCccccC--CCccccCChHHHHHHHHHcCCCC
Q psy9959         273 HCKSHEGEKCWKCE--LCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       273 h~~~~~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      |...|.++++|.|.  .|++.|.+.+.|..|+++|++++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            44567888889996  79999999999999999999874

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=5.1e-08  Score=56.03  Aligned_cols=32  Identities=25%  Similarity=0.596  Sum_probs=25.8

Q ss_pred             cCCCCCccccccCccccCH-HHHHHHHHHhcCC
Q psy9959         236 HTHEKPHKCSICDYASVEL-SKMRNHMRSHTGE  267 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~-~~L~~H~~~h~~~  267 (330)
                      |+++++|.|..|++.|... +.|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            7777888888888888887 8888888888765

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.51  E-value=5.1e-08  Score=52.11  Aligned_cols=28  Identities=25%  Similarity=0.552  Sum_probs=25.4

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcCC
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      +++|.|..|++.|.+...|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3578999999999999999999999975

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.51  E-value=6e-08  Score=51.37  Aligned_cols=27  Identities=33%  Similarity=0.648  Sum_probs=24.6

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcC
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~  306 (330)
                      +++|.|..||+.|.+.+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            367899999999999999999999985

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=4.7e-08  Score=56.27  Aligned_cols=32  Identities=22%  Similarity=0.501  Sum_probs=22.6

Q ss_pred             cCCCCCccccccCccccCHHHHHHH-HHHhcCC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNH-MRSHTGE  267 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H-~~~h~~~  267 (330)
                      |++++||.|..|++.|...+.|..| ++.|+++
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            6667777777777777777777777 6666653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.50  E-value=6.9e-08  Score=53.02  Aligned_cols=29  Identities=24%  Similarity=0.461  Sum_probs=26.4

Q ss_pred             CccccC--CCccccCChHHHHHHHHHcCCCC
Q psy9959         281 KCWKCE--LCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       281 k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      ++|.|.  .||+.|.+.+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            468998  99999999999999999999874

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.50  E-value=7.2e-08  Score=53.34  Aligned_cols=30  Identities=20%  Similarity=0.409  Sum_probs=27.1

Q ss_pred             CCccccC--CCccccCChHHHHHHHHHcCCCC
Q psy9959         280 EKCWKCE--LCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       280 ~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      +++|.|.  .|++.|.+.+.|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3678999  89999999999999999999864

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.50  E-value=4.5e-08  Score=52.66  Aligned_cols=29  Identities=28%  Similarity=0.503  Sum_probs=26.5

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      ++|.|..|++.|.+...|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            46899999999999999999999998864

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.50  E-value=4.7e-08  Score=51.90  Aligned_cols=27  Identities=26%  Similarity=0.546  Sum_probs=24.5

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcC
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~  306 (330)
                      +++|.|..||+.|.+.+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            367899999999999999999999884

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.87  E-value=1.6e-08  Score=54.69  Aligned_cols=29  Identities=31%  Similarity=0.471  Sum_probs=26.4

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      ++|.|..|++.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            46899999999999999999999998764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.48  E-value=5.1e-08  Score=52.43  Aligned_cols=29  Identities=28%  Similarity=0.448  Sum_probs=26.5

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      ++|.|..|++.|.+...|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            46899999999999999999999998864

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.46  E-value=1.2e-07  Score=54.48  Aligned_cols=33  Identities=42%  Similarity=0.704  Sum_probs=27.9

Q ss_pred             cCCCCCccccc--cCccccCHHHHHHHHHHhcCCC
Q psy9959         236 HTHEKPHKCSI--CDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       236 H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      |+++++|.|.+  |++.|...+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            77888899984  9999999999999998888763

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.82  E-value=2.3e-08  Score=54.43  Aligned_cols=29  Identities=31%  Similarity=0.505  Sum_probs=26.5

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      ++|.|..|++.|.+...|..|+++|++++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            57899999999999999999999998764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.44  E-value=1e-07  Score=50.32  Aligned_cols=27  Identities=26%  Similarity=0.583  Sum_probs=23.9

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCCC
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      +|.|..|++.|.+...|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            478999999999999999999999864

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.44  E-value=8.7e-08  Score=58.78  Aligned_cols=34  Identities=26%  Similarity=0.476  Sum_probs=24.0

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHH-HhcCCCC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMR-SHTGERP  269 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~-~h~~~~~  269 (330)
                      |+++++|.|..|++.|.....|..|++ +|+++.+
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            667777778778877777777777777 7776543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.40  E-value=3.8e-07  Score=59.74  Aligned_cols=34  Identities=15%  Similarity=0.291  Sum_probs=29.4

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcCCCC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERP  269 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~  269 (330)
                      |..++||.|..|++.|.....|..|+++|++...
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            6778899999999999999999999999988653

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.37  E-value=1.4e-07  Score=51.11  Aligned_cols=29  Identities=31%  Similarity=0.521  Sum_probs=25.9

Q ss_pred             CccccCCCccccCChHHHHHH-HHHcCCCC
Q psy9959         281 KCWKCELCPYASSSQRHLESH-MLIHTDQK  309 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H-~~~H~~~~  309 (330)
                      ++|.|..|++.|.+.+.|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            468999999999999999999 68998864

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.37  E-value=7.4e-08  Score=53.43  Aligned_cols=31  Identities=26%  Similarity=0.410  Sum_probs=25.2

Q ss_pred             CCeeeccCcccccchhhhhhccccccCcCce
Q psy9959         183 RPHKCSVCERGFKTIASLQNHINTHTGVKPH  213 (330)
Q Consensus       183 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  213 (330)
                      ++|.|..|++.|.....|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4678888888888888888888888887775

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.37  E-value=3.5e-07  Score=49.03  Aligned_cols=28  Identities=32%  Similarity=0.668  Sum_probs=23.1

Q ss_pred             CCccccccCccccCHHHHHHHHHHhcCC
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4688888888888888888888888765

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.34  E-value=2.7e-07  Score=49.87  Aligned_cols=28  Identities=21%  Similarity=0.548  Sum_probs=20.3

Q ss_pred             CCccccccCccccCHHHHHHHHHHhcCC
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            5677777777777777777777777654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.69  E-value=5.9e-08  Score=50.89  Aligned_cols=26  Identities=27%  Similarity=0.452  Sum_probs=23.5

Q ss_pred             CccccCCCccccCChHHHHHHHHHcC
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~  306 (330)
                      ++|.|..||+.|.+.+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            46899999999999999999999884

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.32  E-value=3.7e-07  Score=48.87  Aligned_cols=29  Identities=31%  Similarity=0.688  Sum_probs=23.8

Q ss_pred             CCccccccCccccCHHHHHHHHHHhcCCC
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      ++|.|..|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            46888888888888888888888887753

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.30  E-value=3.9e-07  Score=49.22  Aligned_cols=29  Identities=21%  Similarity=0.681  Sum_probs=22.9

Q ss_pred             CCccccccCccccCHHHHHHHHHHhcCCC
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      ++|.|..|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            46788888888888888888888887764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.29  E-value=2.4e-07  Score=49.78  Aligned_cols=28  Identities=14%  Similarity=0.282  Sum_probs=18.3

Q ss_pred             CCccccccCccccCHHHHHHHHHHhcCC
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      +||.|..|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3566666666666666666666666654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.28  E-value=4.6e-07  Score=47.79  Aligned_cols=26  Identities=42%  Similarity=0.862  Sum_probs=19.2

Q ss_pred             CCccccccCccccCHHHHHHHHHHhc
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~  265 (330)
                      +||.|..||+.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            56777777777777777777777663

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.25  E-value=4.2e-07  Score=48.63  Aligned_cols=28  Identities=29%  Similarity=0.697  Sum_probs=22.6

Q ss_pred             CCccccccCccccCHHHHHHHHHHhcCC
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4688888888888888888888888765

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.25  E-value=8.5e-07  Score=50.41  Aligned_cols=26  Identities=19%  Similarity=0.239  Sum_probs=18.9

Q ss_pred             cCCCCCccccccCccccCHHHHHHHH
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHM  261 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~  261 (330)
                      +.+++||.|..||++|...+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45677777777777777777777776

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=4e-07  Score=48.43  Aligned_cols=26  Identities=35%  Similarity=0.637  Sum_probs=16.5

Q ss_pred             CCccccccCccccCHHHHHHHHHHhc
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~  265 (330)
                      ++|.|..|++.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            45666666666666666666666554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.23  E-value=5.8e-07  Score=49.12  Aligned_cols=28  Identities=32%  Similarity=0.730  Sum_probs=20.5

Q ss_pred             CCcccc--ccCccccCHHHHHHHHHHhcCC
Q psy9959         240 KPHKCS--ICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       240 ~~~~C~--~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      +||.|.  .||+.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            467776  7777777777777777777665

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.55  E-value=1.4e-07  Score=50.73  Aligned_cols=28  Identities=43%  Similarity=0.800  Sum_probs=21.8

Q ss_pred             CCccccccCccccCHHHHHHHHHHhcCC
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      +||.|..|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4678888888888888888888877765

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.21  E-value=3.8e-07  Score=48.18  Aligned_cols=25  Identities=36%  Similarity=0.833  Sum_probs=16.1

Q ss_pred             CCccccccCccccCHHHHHHHHHHh
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSH  264 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h  264 (330)
                      +||.|..||+.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4566666666666666666666554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.20  E-value=6.3e-07  Score=49.38  Aligned_cols=28  Identities=32%  Similarity=0.561  Sum_probs=19.5

Q ss_pred             CCcccc--ccCccccCHHHHHHHHHHhcCC
Q psy9959         240 KPHKCS--ICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       240 ~~~~C~--~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      +||.|.  .|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            567776  6777777777777777777654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.51  E-value=1.8e-07  Score=50.63  Aligned_cols=28  Identities=36%  Similarity=0.671  Sum_probs=21.8

Q ss_pred             CCccccccCccccCHHHHHHHHHHhcCC
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5678888888888888888888877664

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.19  E-value=7.6e-07  Score=47.64  Aligned_cols=27  Identities=30%  Similarity=0.547  Sum_probs=24.7

Q ss_pred             CccccC--CCccccCChHHHHHHHHHcCC
Q psy9959         281 KCWKCE--LCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       281 k~~~C~--~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      ++|.|.  .|++.|.+.+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            368899  999999999999999999974

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.17  E-value=6.6e-07  Score=47.05  Aligned_cols=26  Identities=35%  Similarity=0.671  Sum_probs=16.3

Q ss_pred             CccccccCccccCHHHHHHHHHHhcC
Q psy9959         241 PHKCSICDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       241 ~~~C~~C~k~f~~~~~L~~H~~~h~~  266 (330)
                      ||.|..|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            45666666666666666666666654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.14  E-value=7e-07  Score=54.32  Aligned_cols=29  Identities=17%  Similarity=0.336  Sum_probs=13.6

Q ss_pred             ccccCcCceecC--ccccccCChHHHHHHHh
Q psy9959         205 NTHTGVKPHKCK--YCESRFTTSGELVRHVR  233 (330)
Q Consensus       205 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~  233 (330)
                      ..|+++++|.|.  .|++.|.....|..|++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~   41 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQ   41 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHH
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHH
Confidence            334444444443  34444444444444444

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.35  E-value=4.7e-07  Score=47.26  Aligned_cols=25  Identities=40%  Similarity=0.720  Sum_probs=18.7

Q ss_pred             CCccccccCccccCHHHHHHHHHHh
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSH  264 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h  264 (330)
                      +||.|..||+.|...+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4677777777777777777777766

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.05  E-value=1.1e-06  Score=47.45  Aligned_cols=27  Identities=22%  Similarity=0.520  Sum_probs=14.8

Q ss_pred             CccccccCccccCHHHHHHH-HHHhcCC
Q psy9959         241 PHKCSICDYASVELSKMRNH-MRSHTGE  267 (330)
Q Consensus       241 ~~~C~~C~k~f~~~~~L~~H-~~~h~~~  267 (330)
                      ||.|..|++.|...+.|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            45555555555555555555 4455443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.89  E-value=4.8e-06  Score=44.30  Aligned_cols=25  Identities=24%  Similarity=0.396  Sum_probs=17.4

Q ss_pred             Ccccc--ccCccccCHHHHHHHHHHhc
Q psy9959         241 PHKCS--ICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       241 ~~~C~--~C~k~f~~~~~L~~H~~~h~  265 (330)
                      +|.|.  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56677  77777777777777776664

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.72  E-value=7.2e-05  Score=48.50  Aligned_cols=49  Identities=22%  Similarity=0.496  Sum_probs=35.6

Q ss_pred             ccccccCChHHHHHHHhhhcCCCC------Ccccc--ccCccccCHHHHHHHHHHhc
Q psy9959         217 YCESRFTTSGELVRHVRYKHTHEK------PHKCS--ICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       217 ~C~~~f~~~~~l~~H~~~~H~~~~------~~~C~--~C~k~f~~~~~L~~H~~~h~  265 (330)
                      .|++.|.+...|..|+...|.+.+      +|.|.  .|++.+.....|..|++..+
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            377777777777777754576554      67886  68888888888888887653

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.55  E-value=7e-05  Score=48.55  Aligned_cols=47  Identities=23%  Similarity=0.542  Sum_probs=29.9

Q ss_pred             Ccccccchhhhhhcc-ccccCcC------ceecC--ccccccCChHHHHHHHhhhc
Q psy9959         190 CERGFKTIASLQNHI-NTHTGVK------PHKCK--YCESRFTTSGELVRHVRYKH  236 (330)
Q Consensus       190 C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~H  236 (330)
                      |++.|.+...|..|+ +.|.+.+      +|.|.  .|++.+.....|..|++..|
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            555566665566555 2454433      67775  67777777777888877644

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.42  E-value=0.0003  Score=52.45  Aligned_cols=28  Identities=29%  Similarity=0.413  Sum_probs=23.8

Q ss_pred             ccCCCCccccCCCccccCChHHHHHHHH
Q psy9959         276 SHEGEKCWKCELCPYASSSQRHLESHML  303 (330)
Q Consensus       276 ~~~~~k~~~C~~C~~~F~~~~~L~~H~~  303 (330)
                      ...+.+.|.|.+|++.|.+...|..|+.
T Consensus        87 ~~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           87 SDGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             SSCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             ccCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            3456677899999999999999999984

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.18  E-value=0.0002  Score=53.36  Aligned_cols=49  Identities=16%  Similarity=0.246  Sum_probs=41.5

Q ss_pred             CccccCCCccccCChHHHHHHH--HHc-------------------------------CCCCCcccccCChhhHhhhhHh
Q psy9959         281 KCWKCELCPYASSSQRHLESHM--LIH-------------------------------TDQKPYLCDHCDQIRILICVII  327 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~--~~H-------------------------------~~~~p~~C~~C~~~f~~~~~l~  327 (330)
                      +++.|.+|+..|.+.+.+..|+  +.|                               .+.+.|.|..|++.|.+...|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            3478999999999999999998  334                               1245688999999999999999


Q ss_pred             hc
Q psy9959         328 AI  329 (330)
Q Consensus       328 ~H  329 (330)
                      .|
T Consensus       111 ~H  112 (127)
T 1zu1_A          111 SH  112 (127)
T ss_dssp             HH
T ss_pred             HH
Confidence            88

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.14  E-value=0.00077  Score=53.04  Aligned_cols=108  Identities=16%  Similarity=0.180  Sum_probs=67.2

Q ss_pred             eeccCcccccchhhhhhc-cccccCcCceec--CccccccCChHHHHHHHhhhcCCCCCccccccCccccCHHHHHHHHH
Q psy9959         186 KCSVCERGFKTIASLQNH-INTHTGVKPHKC--KYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMR  262 (330)
Q Consensus       186 ~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~  262 (330)
                      .|+.|...+.....+... +..........|  .-|+..+. ...|..|..  .-.-.+..|+.|+..+ .+..|..|+.
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~~l~v~C~n~GC~~~~~-~~~l~~H~~--~C~~~~v~C~~C~~~~-~r~~l~~H~~  130 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKME-LRHLEDHQA--HCEFALMDCPQCQRPF-QKFHINIHIL  130 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHHTSEEECCSTTCCCEEE-GGGHHHHHT--TCTTSEEECTTTCCEE-EGGGHHHHHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHhhcccCCCCCCCCceec-HhHHHHHHh--cCCceeeECCCCChHH-HHHHHHHHhh
Confidence            888888776543211100 111112244667  45776654 456778874  3345677899998887 6677888887


Q ss_pred             HhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHcCCCCCc
Q psy9959         263 SHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPY  311 (330)
Q Consensus       263 ~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~  311 (330)
                      ..-..++.             .|+.|+..|. ...|..|..++.|..++
T Consensus       131 ~~C~~r~~-------------~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          131 KDCPRRQV-------------SCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             HTCTTCEE-------------ECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             hhCCCCCe-------------ECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            66655543             5999988776 45788999888887664

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.02  E-value=0.00014  Score=53.17  Aligned_cols=32  Identities=16%  Similarity=0.231  Sum_probs=28.4

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHH
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLI  304 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~  304 (330)
                      ....++|+++|.|..|++.|.+.+.|..|+++
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            44567889999999999999999999999875

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.92  E-value=0.00055  Score=40.03  Aligned_cols=24  Identities=21%  Similarity=0.232  Sum_probs=22.0

Q ss_pred             CccccCCCccccCChHHHHHHHHH
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLI  304 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~  304 (330)
                      -+|.|+.|++.|.....|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            568899999999999999999983

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.18  E-value=0.0018  Score=47.37  Aligned_cols=32  Identities=28%  Similarity=0.398  Sum_probs=25.1

Q ss_pred             ccccccCcCceecCccccccCChHHHHHHHhh
Q psy9959         203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRY  234 (330)
Q Consensus       203 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  234 (330)
                      +...|+|+++|.|..|++.|.+...|..|+++
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            34457888888888888888888888888764

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.14  E-value=0.002  Score=50.59  Aligned_cols=105  Identities=14%  Similarity=0.226  Sum_probs=70.8

Q ss_pred             cccccCcccCChh-----HHHHHHhhhCCCCCeee--ccCcccccchhhhhhccccccCcCceecCccccccCChHHHHH
Q psy9959         158 MCNYCNYTSPKRY-----LLARHLKSHSEERPHKC--SVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVR  230 (330)
Q Consensus       158 ~C~~C~~~f~~~~-----~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  230 (330)
                      .|+.|...+....     .+.+-+    ......|  ..|+..+. ...|..|... -.-.+..|+.|+..+ ....|..
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i----~~l~v~C~n~GC~~~~~-~~~l~~H~~~-C~~~~v~C~~C~~~~-~r~~l~~  127 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREI----LSLMVKCPNEGCLHKME-LRHLEDHQAH-CEFALMDCPQCQRPF-QKFHINI  127 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHH----HTSEEECCSTTCCCEEE-GGGHHHHHTT-CTTSEEECTTTCCEE-EGGGHHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHH----hhcccCCCCCCCCceec-HhHHHHHHhc-CCceeeECCCCChHH-HHHHHHH
Confidence            6999987765431     122222    2345678  46877654 5567788753 234678999999988 5667999


Q ss_pred             HHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCCCCce
Q psy9959         231 HVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ  271 (330)
Q Consensus       231 H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~  271 (330)
                      |+.. .-..+...|+.|+..|. ...|..|...+.|+.++.
T Consensus       128 H~~~-~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~~  166 (170)
T 3hcs_A          128 HILK-DCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALEHH  166 (170)
T ss_dssp             HHHH-TCTTCEEECTTTCCEEE-GGGHHHHHTTCCC-----
T ss_pred             Hhhh-hCCCCCeECCCCCCccC-HHHHHhHHHhCcChhhhh
Confidence            9874 56777889999998875 467899999999988764

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.47  E-value=0.016  Score=33.91  Aligned_cols=25  Identities=20%  Similarity=0.294  Sum_probs=17.3

Q ss_pred             CCccccccCccccCHHHHHHHHHHh
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSH  264 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h  264 (330)
                      .+|.|+.|+..|.....|+.||+.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            4567777777777777777777643

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.12  E-value=0.035  Score=30.34  Aligned_cols=25  Identities=24%  Similarity=0.345  Sum_probs=22.1

Q ss_pred             ccccCCCccccCChHHHHHHHHH-cC
Q psy9959         282 CWKCELCPYASSSQRHLESHMLI-HT  306 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~-H~  306 (330)
                      .|.|++|.+.|.+...|..|... |.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            48899999999999999999965 53

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.00  E-value=0.097  Score=28.57  Aligned_cols=27  Identities=22%  Similarity=0.438  Sum_probs=19.7

Q ss_pred             ceecCccccccCChHHHHHHHhhhcCC
Q psy9959         212 PHKCKYCESRFTTSGELVRHVRYKHTH  238 (330)
Q Consensus       212 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  238 (330)
                      .|.|++|-+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            377777777777777777777766654

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=92.25  E-value=0.051  Score=35.83  Aligned_cols=46  Identities=13%  Similarity=0.164  Sum_probs=36.7

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhHhhhhHhhc
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAI  329 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H  329 (330)
                      .|.|..||-.+. +..|..|...-.+-..|.|-.|++.|.. ..++.|
T Consensus        10 ~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A           10 FFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             EEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             EEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            489999998877 5588999877666567999999999985 455555

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=91.97  E-value=0.15  Score=27.88  Aligned_cols=24  Identities=13%  Similarity=0.117  Sum_probs=21.0

Q ss_pred             CCccccCCCccccCChHHHHHHHH
Q psy9959         280 EKCWKCELCPYASSSQRHLESHML  303 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~  303 (330)
                      ...+.|..|+.+|.+...+..|++
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhe
Confidence            345789999999999999999986

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=91.32  E-value=0.19  Score=33.14  Aligned_cols=50  Identities=18%  Similarity=0.388  Sum_probs=36.0

Q ss_pred             CCcccccccCcccCChhHHHHHHhhhCCCCCeeeccCcccccchhhhhhccc
Q psy9959         154 APAHMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHIN  205 (330)
Q Consensus       154 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  205 (330)
                      ...|.|..|+.++.. ..|..|...-.+...|.|-.|++.|.. ..++.|..
T Consensus         8 MV~F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Hts   57 (79)
T 1wjv_A            8 MVFFTCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVK   57 (79)
T ss_dssp             CCEEEESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCC
T ss_pred             eeEEEcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEee
Confidence            445889999987754 567888766555556889999999875 55666754

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=90.88  E-value=0.093  Score=35.43  Aligned_cols=30  Identities=20%  Similarity=0.309  Sum_probs=24.2

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcCCCCCcc
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHTDQKPYL  312 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~  312 (330)
                      .....|-.||+.|.   .|.+|+..|+|..|..
T Consensus        19 ~d~iiClecGK~fK---~LkRHL~~~hgltpee   48 (87)
T 2jsp_A           19 DDHIVCLECGGSFK---SLKRHLTTHHSMTPEE   48 (87)
T ss_dssp             SSCEECTBTCCEES---BHHHHHHHTTCSCHHH
T ss_pred             CCceEecccchhhH---HHHHHHHHccCCCHHH
Confidence            34468999999999   4789999988887743

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=88.38  E-value=0.22  Score=34.84  Aligned_cols=32  Identities=22%  Similarity=0.370  Sum_probs=24.0

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhHhh
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILI  323 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~  323 (330)
                      .+|+|..||..|.           -.-.+|-.||.|+-.+...
T Consensus        66 ~p~~C~~CG~~F~-----------~~~~kPsrCP~CkSe~Ie~   97 (105)
T 2gmg_A           66 KPAQCRKCGFVFK-----------AEINIPSRCPKCKSEWIEE   97 (105)
T ss_dssp             CCCBBTTTCCBCC-----------CCSSCCSSCSSSCCCCBCC
T ss_pred             ECcChhhCcCeec-----------ccCCCCCCCcCCCCCccCC
Confidence            4689999999992           1235789999999766543

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=87.94  E-value=0.46  Score=25.04  Aligned_cols=23  Identities=22%  Similarity=0.420  Sum_probs=20.4

Q ss_pred             ccCCCccccCChHHHHHHHHHcC
Q psy9959         284 KCELCPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       284 ~C~~C~~~F~~~~~L~~H~~~H~  306 (330)
                      -|..|.+.|+...+|..|++--+
T Consensus        11 hcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc
Confidence            49999999999999999998643

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=87.22  E-value=1  Score=24.65  Aligned_cols=24  Identities=21%  Similarity=0.294  Sum_probs=15.3

Q ss_pred             CCccccccCccccCHHHHHHHHHH
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRS  263 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~  263 (330)
                      ..+.|..|+..|.+...+..|.+-
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhee
Confidence            345666666666666666666653

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=86.98  E-value=0.21  Score=32.81  Aligned_cols=14  Identities=29%  Similarity=0.546  Sum_probs=8.4

Q ss_pred             CeeeccCcccccch
Q psy9959         184 PHKCSVCERGFKTI  197 (330)
Q Consensus       184 ~~~C~~C~~~f~~~  197 (330)
                      .-+|++||......
T Consensus         8 ~~~~PlCG~~L~W~   21 (95)
T 2k5c_A            8 MAKCPICGSPLKWE   21 (95)
T ss_dssp             CEECSSSCCEECHH
T ss_pred             cccCCcCCCccCHH
Confidence            35677777665443

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=86.91  E-value=0.57  Score=24.69  Aligned_cols=22  Identities=18%  Similarity=0.591  Sum_probs=15.2

Q ss_pred             cccccCccccCHHHHHHHHHHh
Q psy9959         243 KCSICDYASVELSKMRNHMRSH  264 (330)
Q Consensus       243 ~C~~C~k~f~~~~~L~~H~~~h  264 (330)
                      -|.+|.+.|....+|..|++--
T Consensus        11 hcrfckkkysdvknlikhire~   32 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDA   32 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh
Confidence            4677777777777777777653

>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A

Probab=86.77  E-value=0.78  Score=34.18  Aligned_cols=22  Identities=27%  Similarity=0.369  Sum_probs=11.2

Q ss_pred             hccccccCcCceecCccccccC
Q psy9959         202 NHINTHTGVKPHKCKYCESRFT  223 (330)
Q Consensus       202 ~H~~~h~~~~~~~C~~C~~~f~  223 (330)
                      .|...-...+...|..|++...
T Consensus        48 dH~l~r~~~~~vlCg~C~~~q~   69 (143)
T 2dkt_A           48 DHQLDRFKVKEVQCINCEKLQH   69 (143)
T ss_dssp             SSCCCSSSCCCEEESSSCCEEC
T ss_pred             ccccchhccceeeecccCcccc
Confidence            3433333345566666665543

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=85.84  E-value=0.49  Score=27.56  Aligned_cols=11  Identities=27%  Similarity=0.806  Sum_probs=5.0

Q ss_pred             eeeccCccccc
Q psy9959         185 HKCSVCERGFK  195 (330)
Q Consensus       185 ~~C~~C~~~f~  195 (330)
                      |.|.-||+.|.
T Consensus         4 Y~C~rCg~~fs   14 (48)
T 4ayb_P            4 YRCGKCWKTFT   14 (48)
T ss_dssp             -CCCCTTTTCC
T ss_pred             EEeeccCCCcc
Confidence            44555555543

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=85.81  E-value=0.39  Score=32.40  Aligned_cols=28  Identities=18%  Similarity=0.374  Sum_probs=21.4

Q ss_pred             CCccccccCccccCHHHHHHHHHHhcCCCCc
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      ....|-.||+.|..   |.+|++.|+|..|.
T Consensus        20 d~iiClecGK~fK~---LkRHL~~~hgltpe   47 (87)
T 2jsp_A           20 DHIVCLECGGSFKS---LKRHLTTHHSMTPE   47 (87)
T ss_dssp             SCEECTBTCCEESB---HHHHHHHTTCSCHH
T ss_pred             CceEecccchhhHH---HHHHHHHccCCCHH
Confidence            34678889998885   66899988887654

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=84.67  E-value=0.39  Score=31.63  Aligned_cols=39  Identities=18%  Similarity=0.468  Sum_probs=17.0

Q ss_pred             ceec-CccccccCChHHHHHHHhhhcCCCCCccccccCcccc
Q psy9959         212 PHKC-KYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASV  252 (330)
Q Consensus       212 ~~~C-~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k~f~  252 (330)
                      +..| ..|+..+.. ..|..|+.. .-..++..|.+|+..|.
T Consensus        16 ~v~C~~~C~~~v~r-~~l~~H~~~-~C~~r~v~C~~C~~~~~   55 (76)
T 2yuc_A           16 VIPCPNRCPMKLSR-RDLPAHLQH-DCPKRRLKCEFCGCDFS   55 (76)
T ss_dssp             CCBCTTCCSCBCCS-SSSTTTTTT-SCTTSCCCCSSSCCCCC
T ss_pred             ccCCCccccHHhhH-hHHHhhCHh-hCCCcceECCCCCCccC
Confidence            3445 345544432 234444431 22334455555555543

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=84.66  E-value=0.2  Score=29.48  Aligned_cols=35  Identities=23%  Similarity=0.564  Sum_probs=21.0

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCC--CcccccCChh
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQK--PYLCDHCDQI  319 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~--p~~C~~C~~~  319 (330)
                      +.|+|..||..|.-...--    +--.+-  .+.||.||-.
T Consensus         3 ~~y~C~vCGyvyd~~~Gd~----t~f~~lP~dw~CP~Cg~~   39 (46)
T 6rxn_A            3 QKYVCNVCGYEYDPAEHDN----VPFDQLPDDWCCPVCGVS   39 (46)
T ss_dssp             CCEEETTTCCEECGGGGTT----CCGGGSCTTCBCTTTCCB
T ss_pred             CEEECCCCCeEEeCCcCCC----cchhhCCCCCcCcCCCCc
Confidence            3589999999887432111    100112  3799999953

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=83.78  E-value=0.41  Score=38.39  Aligned_cols=27  Identities=22%  Similarity=0.507  Sum_probs=21.5

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcCCCCCcccccCChh
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQI  319 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~  319 (330)
                      ...|.|..||..+.             |..|..||.||-.
T Consensus       169 ~~~~~C~~CG~i~~-------------g~~p~~CP~C~~~  195 (202)
T 1yuz_A          169 DKFHLCPICGYIHK-------------GEDFEKCPICFRP  195 (202)
T ss_dssp             CCEEECSSSCCEEE-------------SSCCSBCTTTCCB
T ss_pred             CcEEEECCCCCEEc-------------CcCCCCCCCCCCC
Confidence            34699999998875             2578999999953

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.40  E-value=0.52  Score=31.07  Aligned_cols=26  Identities=23%  Similarity=0.299  Sum_probs=21.0

Q ss_pred             ccccCCCccccC-------ChHHHHHHHHHcCC
Q psy9959         282 CWKCELCPYASS-------SQRHLESHMLIHTD  307 (330)
Q Consensus       282 ~~~C~~C~~~F~-------~~~~L~~H~~~H~~  307 (330)
                      .-.|.+|++.|.       .-++|.+|++.+|.
T Consensus        28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~   60 (76)
T 2djr_A           28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSMHR   60 (76)
T ss_dssp             CEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTH
T ss_pred             EEECCCCCCccCCCCCCCCchHHHHHHHHHHCH
Confidence            347999999998       35799999987663

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=83.32  E-value=0.44  Score=37.03  Aligned_cols=26  Identities=31%  Similarity=0.893  Sum_probs=21.3

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcCCCCCcccccCCh
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQ  318 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~  318 (330)
                      ...|.|..||..+.             ++-|-.||.||-
T Consensus       136 ~~~~~C~~CG~i~~-------------~~~p~~CP~Cg~  161 (170)
T 3pwf_A          136 KKVYICPICGYTAV-------------DEAPEYCPVCGA  161 (170)
T ss_dssp             SCEEECTTTCCEEE-------------SCCCSBCTTTCC
T ss_pred             CCeeEeCCCCCeeC-------------CCCCCCCCCCCC
Confidence            45699999999885             367789999994

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=83.16  E-value=1.8  Score=26.02  Aligned_cols=44  Identities=23%  Similarity=0.418  Sum_probs=20.0

Q ss_pred             ecCccccccCChHHHHHHHhhhcCCCCCccccccCc-cccCHHHHHHHH
Q psy9959         214 KCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDY-ASVELSKMRNHM  261 (330)
Q Consensus       214 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~k-~f~~~~~L~~H~  261 (330)
                      .|.+|.....+...|..|....-.    -+|++|-. ...+.++|+.|.
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~----gqCPYC~~~~e~tesAlQaHf   49 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCIN----GQCPYCMTITEATESALQAHY   49 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTT----TBCTTTCCBCCSSHHHHHHHH
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCC----CCCCcccCcCCcCHHHHHHHH
Confidence            355555555555555555543211    25555422 234444444443

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=83.04  E-value=0.47  Score=31.17  Aligned_cols=46  Identities=20%  Similarity=0.322  Sum_probs=31.8

Q ss_pred             cccc-CCCccccCChHHHHHHHHHcCCCCCcccccCChhhHhhhhHhhc
Q psy9959         282 CWKC-ELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAI  329 (330)
Q Consensus       282 ~~~C-~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H  329 (330)
                      +..| ..|+..+.. ..|..|+...-..++..|..|+..|... .|..|
T Consensus        16 ~v~C~~~C~~~v~r-~~l~~H~~~~C~~r~v~C~~C~~~~~~~-~l~~H   62 (76)
T 2yuc_A           16 VIPCPNRCPMKLSR-RDLPAHLQHDCPKRRLKCEFCGCDFSGE-AYESH   62 (76)
T ss_dssp             CCBCTTCCSCBCCS-SSSTTTTTTSCTTSCCCCSSSCCCCCHH-HHHHT
T ss_pred             ccCCCccccHHhhH-hHHHhhCHhhCCCcceECCCCCCccCHH-HHHHH
Confidence            4568 578877764 5777777655566778899998887643 45555

>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}

Probab=83.00  E-value=0.53  Score=34.16  Aligned_cols=28  Identities=18%  Similarity=0.558  Sum_probs=22.2

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcCCCCCc-ccccCChh
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHTDQKPY-LCDHCDQI  319 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~-~C~~C~~~  319 (330)
                      .-.|.|..||..|.-            ...++ .||.||..
T Consensus        71 p~~~~C~~CG~~~e~------------~~~~~~~CP~Cgs~   99 (119)
T 2kdx_A           71 KVELECKDCSHVFKP------------NALDYGVCEKCHSK   99 (119)
T ss_dssp             CCEEECSSSSCEECS------------CCSTTCCCSSSSSC
T ss_pred             cceEEcCCCCCEEeC------------CCCCCCcCccccCC
Confidence            345899999999986            24578 89999965

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=82.46  E-value=0.93  Score=23.43  Aligned_cols=21  Identities=24%  Similarity=0.687  Sum_probs=19.1

Q ss_pred             cccCCCccccCChHHHHHHHH
Q psy9959         283 WKCELCPYASSSQRHLESHML  303 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~  303 (330)
                      |.|++|.....+...|..|..
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHHH
Confidence            789999999999999999975

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=81.20  E-value=2.4  Score=25.51  Aligned_cols=47  Identities=26%  Similarity=0.513  Sum_probs=36.9

Q ss_pred             eeeccCcccccchhhhhhccccccCcCceecCcccc-ccCChHHHHHHHhh
Q psy9959         185 HKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCES-RFTTSGELVRHVRY  234 (330)
Q Consensus       185 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~-~f~~~~~l~~H~~~  234 (330)
                      ..|.+|..-..+...|..|...-..   -+|++|-. ...+.+.|..|.++
T Consensus         4 mvC~~C~~ECET~kEl~~H~~sCp~---gqCPYC~~~~e~tesAlQaHfkv   51 (57)
T 2k9h_A            4 MVCDVCHHECETAKELESHRQSCIN---GQCPYCMTITEATESALQAHYSI   51 (57)
T ss_dssp             TBCTTTCCBCSSTTTHHHHHHHHTT---TBCTTTCCBCCSSHHHHHHHHTT
T ss_pred             chhhHHHhhhhhHHHHHHHhccCCC---CCCCcccCcCCcCHHHHHHHHHH
Confidence            4688998888889999999887533   36888854 56778999999875

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=80.77  E-value=0.92  Score=31.73  Aligned_cols=11  Identities=36%  Similarity=0.881  Sum_probs=5.8

Q ss_pred             CeeeccCcccc
Q psy9959         184 PHKCSVCERGF  194 (330)
Q Consensus       184 ~~~C~~C~~~f  194 (330)
                      +|.|..||..|
T Consensus        67 p~~C~~CG~~F   77 (105)
T 2gmg_A           67 PAQCRKCGFVF   77 (105)
T ss_dssp             CCBBTTTCCBC
T ss_pred             CcChhhCcCee
Confidence            45555555555

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=80.47  E-value=0.92  Score=36.19  Aligned_cols=27  Identities=19%  Similarity=0.243  Sum_probs=22.9

Q ss_pred             CCccccCCCccccCC-hHHHHHHHHHcC
Q psy9959         280 EKCWKCELCPYASSS-QRHLESHMLIHT  306 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~-~~~L~~H~~~H~  306 (330)
                      ..+.+|..|+..|.+ ...|+.|+..|-
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e~  194 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEEY  194 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHHH
Confidence            346789999999987 999999998763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	330
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-09
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	8e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.001
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	8e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	5e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	6e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-06
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.002
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	7e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	8e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	4e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	5e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	4e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	5e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.001
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.002
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	6e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	7e-04
d2dmda3	29	g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {	3e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-04
d2dmda1	28	g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {	0.002
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.004
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.004

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (120), Expect = 2e-09
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI 246
           KP+ C+ C   F+    L  H++  HT E+PHKC +
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (108), Expect = 1e-07
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 180 SEERPHKCSVCERGFKTIASLQNHI-NTHTGVKPHKCK 216
           S  +P+ C  C +GF     L  HI   HT  +PHKC+
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (102), Expect = 8e-07
 Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 237 THEKPHKCSICDYASVELSKMRNHMRS-HTGERPYQ 271
           +  KP+ C  C         +  H++  HT ERP++
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK 36

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 3e-05
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 280 EKCWKCELCPYASSSQRHLESHM-LIHTDQKPYLCD 314
            K + C+ C    S   HL  H+  +HT ++P+ C 
Sbjct: 3   GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 157 HMCNYCNYTSPKRYLLARHLKS-HSEERPHKCSV 189
           ++C  C     +   L  H+K  H+ ERPHKC V
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (107), Expect = 1e-07
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE 267
           H+ EKP+ C  C  A    S +  H R HTGE
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (94), Expect = 8e-06
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 207 HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
           H+G KP+ C  C   F+ S  LV+H R  HT E
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQR-VHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (93), Expect = 1e-05
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 179 HSEERPHKCSVCERGFKTIASLQNHINTHTG 209
           HS E+P+ C  C + F   + L  H   HTG
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (83), Expect = 3e-04
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 277 HEGEKCWKCELCPYASSSQRHLESHMLIHT 306
           H GEK + C  C  A S    L  H  +HT
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHT 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (107), Expect = 1e-07
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
           TH+G KP++C  C +RFT SG +  H+  KHT  
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 3e-05
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE 267
           H+ EKP++C IC     +   M+ H+     E
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 6e-04
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 177 KSHSEERPHKCSVCERGFKTIASLQNHINTHTG 209
           ++HS E+P++C +C   F    +++ HI     
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHT 33

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 14/47 (29%)

Query: 262 RSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHML-IHTD 307
           R+H+GE+PY             +C +C    +    ++ H+L  HT+
Sbjct: 1   RTHSGEKPY-------------ECYICHARFTQSGTMKMHILQKHTE 34

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (104), Expect = 4e-07
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTG 209
            R      E R +KC  C + F   + L  H  THTG
Sbjct: 1   GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (99), Expect = 1e-06
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGE 267
           R    +    + +KC  C  +    S +  H R+HTGE
Sbjct: 2   RSEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (95), Expect = 5e-06
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
                   + +KC  C   F+ S +L +H R  HT E
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRR-THTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 6e-05
 Identities = 10/47 (21%), Positives = 12/47 (25%), Gaps = 13/47 (27%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHT 306
                   R Y             KC+ C  + S    L  H   HT
Sbjct: 3   SEWQQRERRRY-------------KCDECGKSFSHSSDLSKHRRTHT 36

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 1e-06
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 182 ERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVR 233
           ++ + C  C + F   +    H++ H G++P+ C  C  +F     LV H++
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 9e-06
 Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSH 264
           K + C+ C   FT   +  RH+       +P+ C +C         +  HM+ H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGL-RPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 2e-04
 Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 14/67 (20%)

Query: 239 EKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHL 298
           +K + C  C  +    S+   HM  H G R              + C +C      + HL
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLR-------------PYGCGVCGKKFKMKHHL 46

Query: 299 ESHMLIH 305
             HM IH
Sbjct: 47  VGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 6e-04
 Identities = 14/46 (30%), Positives = 20/46 (43%)

Query: 162 CNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTH 207
           C  +   +    RH+  H   RP+ C VC + FK    L  H+  H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (98), Expect = 2e-06
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEK 240
           THTG KP+ C +C+  F     L  H + ++    
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (97), Expect = 3e-06
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE 267
           HT EKP+ CS CD    +   +  H + +   
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 7e-05
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 177 KSHSEERPHKCSVCERGFKTIASLQNHINTHTG 209
           ++H+ E+P+ CS C++ F+    L  H   +  
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 1e-04
 Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 13/48 (27%)

Query: 262 RSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQK 309
           R+HTGE+PY              C  C      ++ L+ H   + D  
Sbjct: 1   RTHTGEKPY-------------ACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.7 bits (95), Expect = 5e-06
 Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 226 GELVRHVRYKHTHEKPHKCSICD--YASVELSKMRNHMRSHTGER 268
           G + ++V  K   +K  +C              +R+H+++H  +R
Sbjct: 5   GSIDKYV--KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.8 bits (77), Expect = 0.002
 Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 168 KRYLLARHLKSHSEERPHKCSVCERG--FKTIASLQNHINTHTGVK 211
            R  + +++K    ++  +C        FK   ++++HI TH   +
Sbjct: 3   PRGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (93), Expect = 1e-05
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVR 233
                TG+KP +C  C+  F+ S  L  H +
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.4 bits (87), Expect = 7e-05
 Identities = 11/47 (23%), Positives = 15/47 (31%), Gaps = 13/47 (27%)

Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHT 306
             R  TG +P+             +C  C  + S   HL  H   H 
Sbjct: 2   STRGSTGIKPF-------------QCPDCDRSFSRSDHLALHRKRHM 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.0 bits (86), Expect = 8e-05
 Identities = 9/36 (25%), Positives = 14/36 (38%)

Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGV 210
             +  +  +P +C  C+R F     L  H   H  V
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (82), Expect = 4e-04
 Identities = 9/36 (25%), Positives = 13/36 (36%), Gaps = 1/36 (2%)

Query: 231 HVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTG 266
             R   T  KP +C  CD +      +  H + H  
Sbjct: 2   STR-GSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 240 KPHKCSICDYASVELSKMRNHMRSHTGER 268
           +   C +C  A      ++ H RSHT E+
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHTHEK 240
           +   C+ C   F     L RH R  HT+EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYR-SHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 36.1 bits (84), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 183 RPHKCSVCERGFKTIASLQNHINTHTGVK 211
           R   C VC R F     L+ H  +HT  K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (91), Expect = 2e-05
 Identities = 5/29 (17%), Positives = 12/29 (41%)

Query: 240 KPHKCSICDYASVELSKMRNHMRSHTGER 268
           K   C  C    +    +  H+++H  ++
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 5e-04
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHTHEK 240
           K   C  C  RF  S  L +H++  H ++K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIK-THQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 9/29 (31%), Positives = 11/29 (37%)

Query: 183 RPHKCSVCERGFKTIASLQNHINTHTGVK 211
           +   C  C + F     L  HI TH   K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (88), Expect = 4e-05
 Identities = 6/32 (18%), Positives = 14/32 (43%)

Query: 186 KCSVCERGFKTIASLQNHINTHTGVKPHKCKY 217
               C + F     L+ H+  H+  + + C++
Sbjct: 5   PEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 5e-04
 Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 281 KCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD 314
            C     C  + + ++HL+ HM +H+D + Y+C+
Sbjct: 3   SC-PEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.001
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 243 KCSICDYASVELSKMRNHMRSHTGERPYQ 271
               C  +      ++ HM+ H+  R Y 
Sbjct: 5   PEPACGKSFNFKKHLKEHMKLHSDTRDYI 33

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 3/34 (8%)

Query: 213 HKCKY--CESRFTTSGELVRHVRYKHTHEKPHKC 244
             C    C   F     L  H++  H+  + + C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYIC 34

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.2 bits (87), Expect = 6e-05
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 239 EKPHKCSICDYASVELSKMRNHMRSHTG 266
           +KP +C IC         +  H+R+HTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 182 ERPHKCSVCERGFKTIASLQNHINTHTG 209
           ++P +C +C R F     L  HI THTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.7 bits (85), Expect = 1e-04
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 207 HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
            +G +P  C+ C S FTT     RH++  HT  
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLK-VHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.7 bits (85), Expect = 1e-04
 Identities = 8/32 (25%), Positives = 14/32 (43%)

Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE 267
            + ++P  C IC  A    +    H++ HT  
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.9 bits (83), Expect = 2e-04
 Identities = 8/31 (25%), Positives = 18/31 (58%)

Query: 277 HEGEKCWKCELCPYASSSQRHLESHMLIHTD 307
             G++ + C +C  A +++ +   H+ +HTD
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (79), Expect = 7e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 179 HSEERPHKCSVCERGFKTIASLQNHINTHTG 209
            S +RP  C +C   F T A+   H+  HT 
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 3e-04
 Identities = 16/29 (55%), Positives = 21/29 (72%)

Query: 239 EKPHKCSICDYASVELSKMRNHMRSHTGE 267
           E+P KC IC YAS   S++  H+RSHTG+
Sbjct: 1   ERPFKCQICPYASRNSSQLTVHLRSHTGD 29

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 6e-04
 Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 240 KPHKCSI--CDYASVELSKMRNHMRSHTGER 268
           +P  C+   C        +++ H R+HTGE+
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (74), Expect = 0.002
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 240 KPHKCSICDYASVELSKMRNHMRSHT 265
           KP+KC  CDYA+ + S +  H+R H+
Sbjct: 2   KPYKCKTCDYAAADSSSLNKHLRIHS 27

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.004
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 240 KPHKCSI--CDYASVELSKMRNHMRSHTGE 267
           KPHKC+   C  +   L  ++ H+RSHTGE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (73), Expect = 0.004
 Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 3/29 (10%)

Query: 211 KPHKCKY--CESRFTTSGELVRHVRYKHT 237
           +P+ C +  C  +F  S  L  H+   H 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHIL-THA 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	330
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.66
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.64
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.47
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.38
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.37
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.31
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.27
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.27
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.25
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.24
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.23
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.23
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.22
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.21
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.21
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.2
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.14
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.11
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.1
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.09
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.08
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.07
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.03
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.03
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.02
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.99
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.99
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.98
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.92
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.85
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.83
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.81
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.78
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.78
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.76
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.74
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.72
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.68
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.63
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.61
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.51
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.5
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.43
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.43
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.42
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.36
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.31
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.26
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.24
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.21
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.15
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.11
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.1
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.08
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.04
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.02
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.98
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.97
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.9
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.89
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.85
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.83
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.82
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.82
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.71
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.71
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.68
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.6
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.54
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.53
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.45
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.43
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.37
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.34
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.32
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.29
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.25
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.22
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.13
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.08
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.04
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.99
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.99
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.89
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.65
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.54
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.53
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.48
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.42
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.38
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.21
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.08
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.07
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.92
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.81
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.8
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.74
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.61
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.51
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.29
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.22
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.22
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	95.06
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.92
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.6
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.4
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.29
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	94.18
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.92
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.82
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.78
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.59
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	93.41
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.32
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	93.22
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.72
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	92.52
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.39
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	91.41
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	91.2
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	90.97
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.05
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	89.5
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	86.92
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.51
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	83.88
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	83.04
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	80.57
d2dkta1	74	RING finger and CHY zinc finger domain-containing	80.36

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=4.2e-17  Score=101.77  Aligned_cols=53  Identities=36%  Similarity=0.638  Sum_probs=45.6

Q ss_pred             CCCccccccCccccCHHHHHHHHHHhcCCCCceeeecccCCCCccccCCCccccCChHHHHHHHHHc
Q psy9959         239 EKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIH  305 (330)
Q Consensus       239 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H  305 (330)
                      ++||.|. ||++|.....|..|+++|++++||             .|.+||++|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy-------------~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPY-------------GCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSE-------------ECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCC-------------cCCCcCCEecCHHHHHHHHhcC
Confidence            5789994 999999999999999988887774             6999999999999999998887

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=2.9e-17  Score=102.51  Aligned_cols=50  Identities=20%  Similarity=0.495  Sum_probs=47.4

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcCCCCCcccccCChhhHhhhhHhhcC
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQIRILICVIIAIR  330 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~  330 (330)
                      +|+|+|. ||++|.....|..|+++|+|++||.|+.||++|.....|.+|.
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~   50 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM   50 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHH
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHH
Confidence            5789995 9999999999999999999999999999999999999999983

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.5e-14  Score=81.97  Aligned_cols=37  Identities=30%  Similarity=0.577  Sum_probs=34.0

Q ss_pred             CCCccccCCCccccCChHHHHHHHH-HcCCCCCccccc
Q psy9959         279 GEKCWKCELCPYASSSQRHLESHML-IHTDQKPYLCDH  315 (330)
Q Consensus       279 ~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~~p~~C~~  315 (330)
                      .+|||+|..||++|...++|.+|++ +|+|+|||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4688999999999999999999986 799999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.1e-13  Score=78.58  Aligned_cols=37  Identities=22%  Similarity=0.328  Sum_probs=34.6

Q ss_pred             eeecccCCCCccccCCCccccCChHHHHHHHHHcCCC
Q psy9959         272 LHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       272 ~h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      .|+++|+++|||.|..||++|...++|..|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4788899999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.4e-13  Score=74.76  Aligned_cols=33  Identities=36%  Similarity=0.508  Sum_probs=30.7

Q ss_pred             ccCCCCccccCCCccccCChHHHHHHHHHcCCC
Q psy9959         276 SHEGEKCWKCELCPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       276 ~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      +|+++|||+|..||++|.+.++|..|+++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            578888899999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=6.3e-13  Score=74.28  Aligned_cols=35  Identities=26%  Similarity=0.503  Sum_probs=31.8

Q ss_pred             cccCCCCccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         275 KSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       275 ~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      ++|+|+|||+|.+||++|...+.|..|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            47888888999999999999999999999998763

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.27  E-value=1.3e-12  Score=73.59  Aligned_cols=35  Identities=26%  Similarity=0.349  Sum_probs=32.3

Q ss_pred             eecccCCCCccccCCCccccCChHHHHHHHHHcCC
Q psy9959         273 HCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       273 h~~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      |.++|+|+|||+|..|+++|.++++|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67888899999999999999999999999999964

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.27  E-value=1.2e-12  Score=68.94  Aligned_cols=29  Identities=38%  Similarity=0.729  Sum_probs=27.5

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      |||.|++||++|.+.++|.+|+++|+|+|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57899999999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=1.8e-12  Score=71.34  Aligned_cols=32  Identities=25%  Similarity=0.597  Sum_probs=29.6

Q ss_pred             cCCCCccccCCCccccCChHHHHHHHHHcCCC
Q psy9959         277 HEGEKCWKCELCPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       277 ~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      |+|+|||+|.+|++.|.++++|.+|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            57888899999999999999999999999875

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=8.2e-13  Score=74.91  Aligned_cols=36  Identities=28%  Similarity=0.454  Sum_probs=20.5

Q ss_pred             HHhhhcCCCCCccccccCccccCHHHHHHHHHHhcCC
Q psy9959         231 HVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       231 H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      |+++ |++++||.|..||++|...++|..|+++|+||
T Consensus         3 H~~~-Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQ-QRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSC-CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcc-cCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4443 55555566655666666666666665555553

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.23  E-value=1.5e-12  Score=67.66  Aligned_cols=28  Identities=32%  Similarity=0.636  Sum_probs=26.4

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcCC
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      +|||+|.+|+++|.++++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5789999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.9e-12  Score=69.51  Aligned_cols=32  Identities=44%  Similarity=0.630  Sum_probs=27.4

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcCC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      |++++||.|..||++|...+.|..|+++|+||
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            78888888888888888888888888888875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.7e-12  Score=67.42  Aligned_cols=29  Identities=31%  Similarity=0.606  Sum_probs=27.4

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      |||.|.+||++|.++++|.+|+++|+|+|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57899999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=6.5e-12  Score=70.94  Aligned_cols=36  Identities=39%  Similarity=0.792  Sum_probs=24.8

Q ss_pred             cCceecCccccccCChHHHHHHHhhhcCCCCCcccc
Q psy9959         210 VKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCS  245 (330)
Q Consensus       210 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  245 (330)
                      ++||.|.+||+.|.....|.+|++..|++++||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            466777777777777777777765447777777765

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=2.5e-12  Score=71.42  Aligned_cols=33  Identities=30%  Similarity=0.824  Sum_probs=31.0

Q ss_pred             cccCC--CccccCChHHHHHHHHHcCCCCCccccc
Q psy9959         283 WKCEL--CPYASSSQRHLESHMLIHTDQKPYLCDH  315 (330)
Q Consensus       283 ~~C~~--C~~~F~~~~~L~~H~~~H~~~~p~~C~~  315 (330)
                      |.|+.  ||++|.++.+|++|+++|+|+|||.|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            67987  9999999999999999999999999973

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=4.1e-12  Score=70.73  Aligned_cols=34  Identities=24%  Similarity=0.571  Sum_probs=29.6

Q ss_pred             cccCCCCccccCCCccccCChHHHHHHHHHcCCC
Q psy9959         275 KSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       275 ~~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      ++|+|+|||+|++|+++|.++++|.+|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4788889999999999999999999998765543

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.5e-11  Score=68.50  Aligned_cols=32  Identities=31%  Similarity=0.475  Sum_probs=25.9

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcCC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      |+|++||+|..||++|...+.|..|+++|+++
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            78888888888888888888888888888754

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.11  E-value=1.8e-11  Score=67.28  Aligned_cols=32  Identities=25%  Similarity=0.497  Sum_probs=23.0

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcCC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      |+|++||+|.+|++.|..++.|.+|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            56777777777777777777777777777654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=1.4e-11  Score=69.14  Aligned_cols=34  Identities=26%  Similarity=0.408  Sum_probs=20.0

Q ss_pred             HHhhhcCCCCCccccccCccccCHHHHHHHHHHhc
Q psy9959         231 HVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       231 H~~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~  265 (330)
                      |.|. |++++||+|..|++.|..+++|..|+++|.
T Consensus         2 h~R~-HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRG-STGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSST-TCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCc-cCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            3443 666666666666666666666666666554

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.09  E-value=2.3e-11  Score=63.93  Aligned_cols=29  Identities=31%  Similarity=0.676  Sum_probs=23.9

Q ss_pred             CCccccccCccccCHHHHHHHHHHhcCCC
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      +||.|++|++.|...+.|.+|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57888888888888888888888888774

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=2.7e-11  Score=62.82  Aligned_cols=28  Identities=36%  Similarity=0.763  Sum_probs=24.6

Q ss_pred             CCCccccccCccccCHHHHHHHHHHhcC
Q psy9959         239 EKPHKCSICDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       239 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~  266 (330)
                      ++||+|..|+++|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5789999999999999999999998876

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=1.9e-11  Score=61.70  Aligned_cols=26  Identities=42%  Similarity=0.510  Sum_probs=24.5

Q ss_pred             CccccCCCccccCChHHHHHHHHHcC
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~  306 (330)
                      |||+|..||++|...++|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57899999999999999999999995

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=7.3e-11  Score=62.23  Aligned_cols=28  Identities=32%  Similarity=0.565  Sum_probs=26.4

Q ss_pred             CccccCC--CccccCChHHHHHHHHHcCCC
Q psy9959         281 KCWKCEL--CPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       281 k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      |||.|.+  |+++|.+.++|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5789999  999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=5e-11  Score=62.48  Aligned_cols=29  Identities=17%  Similarity=0.507  Sum_probs=23.9

Q ss_pred             CCccccccCccccCHHHHHHHHHHhcCCC
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      +||.|+.||+.|..++.|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57888888888888888888888888764

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=9.6e-11  Score=65.06  Aligned_cols=31  Identities=29%  Similarity=0.538  Sum_probs=19.0

Q ss_pred             cCCCCCccccccCccccCHHHHHHHHHHhcC
Q psy9959         236 HTHEKPHKCSICDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       236 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~  266 (330)
                      |+|++||.|++|++.|...++|..|++.+++
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            6666666666666666666666666554443

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.99  E-value=4.1e-11  Score=70.90  Aligned_cols=34  Identities=18%  Similarity=0.477  Sum_probs=31.1

Q ss_pred             ccCCCCccccCC--CccccCChHHHHHHHHHcCCCC
Q psy9959         276 SHEGEKCWKCEL--CPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       276 ~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      .|.+++||.|.+  |+++|...++|..|+++|+|+|
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            377888899988  9999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=7.5e-11  Score=62.33  Aligned_cols=28  Identities=32%  Similarity=0.558  Sum_probs=26.2

Q ss_pred             CccccCC--CccccCChHHHHHHHHHcCCC
Q psy9959         281 KCWKCEL--CPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       281 k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      |||.|++  ||++|.+.++|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5789988  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.4e-10  Score=61.82  Aligned_cols=29  Identities=24%  Similarity=0.461  Sum_probs=26.5

Q ss_pred             CccccC--CCccccCChHHHHHHHHHcCCCC
Q psy9959         281 KCWKCE--LCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       281 k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      |||.|+  .|+++|.+.++|.+|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            578996  59999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=2.6e-10  Score=57.45  Aligned_cols=26  Identities=46%  Similarity=0.603  Sum_probs=22.1

Q ss_pred             CCccccccCccccCHHHHHHHHHHhc
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~  265 (330)
                      |||+|..|||+|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58888888888888888888888885

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=9.4e-10  Score=57.87  Aligned_cols=28  Identities=50%  Similarity=1.036  Sum_probs=23.9

Q ss_pred             CCccccc--cCccccCHHHHHHHHHHhcCC
Q psy9959         240 KPHKCSI--CDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       240 ~~~~C~~--C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      +||.|++  |+++|...+.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5788888  888888888888888888875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=9e-10  Score=58.08  Aligned_cols=28  Identities=36%  Similarity=0.700  Sum_probs=24.3

Q ss_pred             CCccccc--cCccccCHHHHHHHHHHhcCC
Q psy9959         240 KPHKCSI--CDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       240 ~~~~C~~--C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      +||.|++  |+++|...+.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5888977  999999999999999998875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.81  E-value=5.4e-10  Score=65.98  Aligned_cols=32  Identities=19%  Similarity=0.470  Sum_probs=14.8

Q ss_pred             cCCCCCccccc--cCccccCHHHHHHHHHHhcCC
Q psy9959         236 HTHEKPHKCSI--CDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       236 H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      |++++||.|.+  |++.|...+.|..|+++|+|+
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            44444444443  444444444444444444443

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.78  E-value=7.1e-10  Score=57.81  Aligned_cols=27  Identities=30%  Similarity=0.572  Sum_probs=25.2

Q ss_pred             CccccCC--CccccCChHHHHHHHHHcCC
Q psy9959         281 KCWKCEL--CPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       281 k~~~C~~--C~~~F~~~~~L~~H~~~H~~  307 (330)
                      |||.|.+  |+++|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5789988  99999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.78  E-value=1.8e-09  Score=57.71  Aligned_cols=29  Identities=21%  Similarity=0.456  Sum_probs=26.4

Q ss_pred             CCccccCC--CccccCChHHHHHHHHHcCCC
Q psy9959         280 EKCWKCEL--CPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       280 ~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      +|||.|.+  |+++|++.++|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            57889998  999999999999999999864

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.8e-09  Score=57.43  Aligned_cols=29  Identities=31%  Similarity=0.736  Sum_probs=22.1

Q ss_pred             CCcccc--ccCccccCHHHHHHHHHHhcCCC
Q psy9959         240 KPHKCS--ICDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       240 ~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      +||.|+  .|++.|...+.|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            577885  48888888888888888887764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=3.4e-09  Score=58.48  Aligned_cols=29  Identities=24%  Similarity=0.531  Sum_probs=20.8

Q ss_pred             ccccc--cCccccCHHHHHHHHHHhcCCCCc
Q psy9959         242 HKCSI--CDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       242 ~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      |.|+.  ||++|...+.|++|+++|+|++||
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy   32 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDY   32 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCE
Confidence            56665  777777777777777777777664

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=3.2e-09  Score=50.50  Aligned_cols=26  Identities=38%  Similarity=0.613  Sum_probs=24.3

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCC
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      |++|..|++.|+++..|..|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46899999999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=2.2e-09  Score=55.21  Aligned_cols=26  Identities=27%  Similarity=0.625  Sum_probs=24.3

Q ss_pred             CccccCC--CccccCChHHHHHHHHHcC
Q psy9959         281 KCWKCEL--CPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       281 k~~~C~~--C~~~F~~~~~L~~H~~~H~  306 (330)
                      |||.|+.  ||++|.+.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5789998  9999999999999999996

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=7.8e-09  Score=52.93  Aligned_cols=32  Identities=38%  Similarity=0.627  Sum_probs=29.3

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCCCcc
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQKPYL  312 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~  312 (330)
                      +...|..||+.|....+|.+|..+|++++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            34679999999999999999999999999984

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.61  E-value=8e-09  Score=53.71  Aligned_cols=27  Identities=33%  Similarity=0.765  Sum_probs=22.4

Q ss_pred             CCccccc--cCccccCHHHHHHHHHHhcC
Q psy9959         240 KPHKCSI--CDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       240 ~~~~C~~--C~k~f~~~~~L~~H~~~h~~  266 (330)
                      +||.|.+  |+++|...+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5788877  88888888888888888875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.51  E-value=3e-08  Score=48.80  Aligned_cols=27  Identities=26%  Similarity=0.504  Sum_probs=25.0

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcC
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~  306 (330)
                      ++||.|.+||+.|.+.....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            478899999999999999999999995

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.50  E-value=2.3e-08  Score=53.27  Aligned_cols=28  Identities=32%  Similarity=0.606  Sum_probs=19.2

Q ss_pred             CCCccccc--cCccccCHHHHHHHHHHhcC
Q psy9959         239 EKPHKCSI--CDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       239 ~~~~~C~~--C~k~f~~~~~L~~H~~~h~~  266 (330)
                      ++||.|.+  |++.|...+.|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46677766  77777777777777777654

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=2.3e-08  Score=51.32  Aligned_cols=26  Identities=19%  Similarity=0.648  Sum_probs=19.2

Q ss_pred             CCccccc--cCccccCHHHHHHHHHHhc
Q psy9959         240 KPHKCSI--CDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       240 ~~~~C~~--C~k~f~~~~~L~~H~~~h~  265 (330)
                      +||.|+.  |||+|...++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677776  7777777777777777774

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=3.7e-08  Score=46.80  Aligned_cols=26  Identities=46%  Similarity=0.974  Sum_probs=18.1

Q ss_pred             CccccccCccccCHHHHHHHHHHhcC
Q psy9959         241 PHKCSICDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       241 ~~~C~~C~k~f~~~~~L~~H~~~h~~  266 (330)
                      |++|+.|++.|..+..|+.|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45677777777777777777776654

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=7.5e-08  Score=46.94  Aligned_cols=29  Identities=41%  Similarity=0.880  Sum_probs=26.8

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcCCC
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      ++||+|..|...-.+.+.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46899999999999999999999999984

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=1.3e-07  Score=47.21  Aligned_cols=29  Identities=21%  Similarity=0.459  Sum_probs=26.6

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcCCC
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      ++||.|++|+..|.++..+..|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47889999999999999999999999874

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1.7e-07  Score=45.46  Aligned_cols=26  Identities=31%  Similarity=0.524  Sum_probs=24.4

Q ss_pred             cccCCCccccCChHHHHHHHHHcCCC
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      +.|..||++|...+.|++|+.+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            57999999999999999999999985

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=1.5e-07  Score=48.09  Aligned_cols=30  Identities=33%  Similarity=0.711  Sum_probs=18.2

Q ss_pred             CccccccCccccCHHHHHHHHHHhcCCCCc
Q psy9959         241 PHKCSICDYASVELSKMRNHMRSHTGERPY  270 (330)
Q Consensus       241 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  270 (330)
                      ...|..||+.|.....|.+|...|.+++||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            345666666666666666666666666554

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=3.7e-07  Score=45.58  Aligned_cols=27  Identities=22%  Similarity=0.431  Sum_probs=24.4

Q ss_pred             CccccCC--CccccCChHHHHHHHHHcCC
Q psy9959         281 KCWKCEL--CPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       281 k~~~C~~--C~~~F~~~~~L~~H~~~H~~  307 (330)
                      |||.|.+  |+++|+..++|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5688988  99999999999999998775

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=6.5e-07  Score=43.84  Aligned_cols=27  Identities=30%  Similarity=0.592  Sum_probs=25.6

Q ss_pred             cccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      |.|++||......+-|..|+|+|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.15  E-value=4.9e-07  Score=44.41  Aligned_cols=26  Identities=31%  Similarity=0.644  Sum_probs=15.4

Q ss_pred             CCCccccccCccccCHHHHHHHHHHh
Q psy9959         239 EKPHKCSICDYASVELSKMRNHMRSH  264 (330)
Q Consensus       239 ~~~~~C~~C~k~f~~~~~L~~H~~~h  264 (330)
                      ++||.|.+||+.|+.....++|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            35566666666666666666665555

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=1e-06  Score=42.47  Aligned_cols=27  Identities=41%  Similarity=0.865  Sum_probs=25.0

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCC
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      +||+|..|..+-...++|..|+|+|..
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs~   28 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHSD   28 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSCC
T ss_pred             CCcccccccchhcchhhHhhhhhcccC
Confidence            678999999999999999999999963

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=1.6e-06  Score=42.49  Aligned_cols=27  Identities=30%  Similarity=0.575  Sum_probs=23.5

Q ss_pred             ccccccCccccCHHHHHHHHHHhcCCC
Q psy9959         242 HKCSICDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       242 ~~C~~C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      |.|++||......+-|+.|+|+|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999998864

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=6.6e-07  Score=43.31  Aligned_cols=26  Identities=50%  Similarity=0.768  Sum_probs=16.2

Q ss_pred             ccccccCccccCHHHHHHHHHHhcCC
Q psy9959         242 HKCSICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       242 ~~C~~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      +.|..|||+|...+.|++|+..|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            45666666666666666666666553

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.04  E-value=1.8e-06  Score=41.08  Aligned_cols=26  Identities=31%  Similarity=0.396  Sum_probs=24.6

Q ss_pred             ccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         284 KCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       284 ~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      +|+.|.++|.++..|..|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            59999999999999999999999985

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.02  E-value=1.7e-06  Score=40.50  Aligned_cols=24  Identities=29%  Similarity=0.628  Sum_probs=22.7

Q ss_pred             cccCCCccccCChHHHHHHHHHcC
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~  306 (330)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999985

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=3e-06  Score=42.17  Aligned_cols=28  Identities=39%  Similarity=0.775  Sum_probs=17.7

Q ss_pred             CCCccccccCccccCHHHHHHHHHHhcC
Q psy9959         239 EKPHKCSICDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       239 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~  266 (330)
                      ++||.|++|+..|..+..+..|.+.|-|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            3566666666666666666666666654

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=1.7e-06  Score=42.04  Aligned_cols=28  Identities=57%  Similarity=1.042  Sum_probs=18.2

Q ss_pred             CCCccccccCccccCHHHHHHHHHHhcC
Q psy9959         239 EKPHKCSICDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       239 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~  266 (330)
                      ++||+|..|.+.-.+.+.|..|+|.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            3566666666666666666666666665

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=4.2e-06  Score=41.67  Aligned_cols=27  Identities=30%  Similarity=0.683  Sum_probs=20.8

Q ss_pred             CCccccc--cCccccCHHHHHHHHHHhcC
Q psy9959         240 KPHKCSI--CDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       240 ~~~~C~~--C~k~f~~~~~L~~H~~~h~~  266 (330)
                      +||.|..  |++.|...++|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5777776  88888888888888887664

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.89  E-value=6e-06  Score=39.27  Aligned_cols=26  Identities=31%  Similarity=0.620  Sum_probs=21.2

Q ss_pred             cccccCccccCHHHHHHHHHHhcCCC
Q psy9959         243 KCSICDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       243 ~C~~C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      +|+.|.+.|.++..|+.|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58888888888888888888888764

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=6.3e-06  Score=39.67  Aligned_cols=26  Identities=46%  Similarity=0.979  Sum_probs=22.3

Q ss_pred             CCccccccCccccCHHHHHHHHHHhc
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~  265 (330)
                      +||+|..|.++-...++|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68888888888888888888888874

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=7.9e-06  Score=40.12  Aligned_cols=27  Identities=22%  Similarity=0.683  Sum_probs=23.7

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCC
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      +||.|.+|.......++|..|+++-++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            578999999999999999999987443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.82  E-value=7.9e-06  Score=39.85  Aligned_cols=29  Identities=28%  Similarity=0.591  Sum_probs=26.3

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcCCC
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      +..|.|..|...|.++-.|+.||..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34589999999999999999999999985

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.82  E-value=6.8e-06  Score=44.25  Aligned_cols=30  Identities=23%  Similarity=0.579  Sum_probs=26.8

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      .+.|.|.+|++.|.+...|-=||+.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            356899999999999999999999997654

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.71  E-value=1e-05  Score=39.37  Aligned_cols=25  Identities=24%  Similarity=0.412  Sum_probs=22.7

Q ss_pred             CccccCC--CccccCChHHHHHHHHHc
Q psy9959         281 KCWKCEL--CPYASSSQRHLESHMLIH  305 (330)
Q Consensus       281 k~~~C~~--C~~~F~~~~~L~~H~~~H  305 (330)
                      .||+|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4688987  999999999999999988

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.2e-05  Score=39.27  Aligned_cols=24  Identities=21%  Similarity=0.574  Sum_probs=21.9

Q ss_pred             ccccCCCccccCChHHHHHHHHHc
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIH  305 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H  305 (330)
                      ||.|..|..+|.++.+|..||++-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            578999999999999999999864

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.7e-05  Score=38.94  Aligned_cols=27  Identities=37%  Similarity=0.763  Sum_probs=13.4

Q ss_pred             ceecCccccccCChHHHHHHHhhhcCC
Q psy9959         212 PHKCKYCESRFTTSGELVRHVRYKHTH  238 (330)
Q Consensus       212 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  238 (330)
                      ||.|.+|.......++|+.|+++.|+.
T Consensus         2 py~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             Cccccccccccccchhhhhhhhccccc
Confidence            455555555555555555555544443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.60  E-value=1.4e-05  Score=37.37  Aligned_cols=24  Identities=38%  Similarity=0.706  Sum_probs=16.8

Q ss_pred             ccccccCccccCHHHHHHHHHHhc
Q psy9959         242 HKCSICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       242 ~~C~~C~k~f~~~~~L~~H~~~h~  265 (330)
                      |+|..|.+.|..+++|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            567777777777777777776663

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.54  E-value=2.3e-05  Score=39.34  Aligned_cols=26  Identities=31%  Similarity=0.513  Sum_probs=22.8

Q ss_pred             ccccCCCccccCChHHHHHHH-HHcCC
Q psy9959         282 CWKCELCPYASSSQRHLESHM-LIHTD  307 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~-~~H~~  307 (330)
                      ||.|.+|++.|.++.-|.+|. +.|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            588999999999999999998 45765

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.53  E-value=3.9e-05  Score=37.32  Aligned_cols=25  Identities=28%  Similarity=0.550  Sum_probs=19.7

Q ss_pred             CCccccc--cCccccCHHHHHHHHHHh
Q psy9959         240 KPHKCSI--CDYASVELSKMRNHMRSH  264 (330)
Q Consensus       240 ~~~~C~~--C~k~f~~~~~L~~H~~~h  264 (330)
                      .||.|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677876  888888888888888776

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.45  E-value=2.4e-05  Score=38.27  Aligned_cols=28  Identities=36%  Similarity=0.599  Sum_probs=25.1

Q ss_pred             CccccCC--CccccCChHHHHHHHHHcCCC
Q psy9959         281 KCWKCEL--CPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       281 k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      +||.|..  |.+.|.+.-+|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4678877  999999999999999999875

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=1.8e-05  Score=39.71  Aligned_cols=28  Identities=29%  Similarity=0.477  Sum_probs=24.4

Q ss_pred             CccccCC--CccccCChHHHHHHH-HHcCCC
Q psy9959         281 KCWKCEL--CPYASSSQRHLESHM-LIHTDQ  308 (330)
Q Consensus       281 k~~~C~~--C~~~F~~~~~L~~H~-~~H~~~  308 (330)
                      |||.|.+  |.|+|++.+.-..|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            5788998  999999999999998 888753

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.37  E-value=5.4e-05  Score=40.65  Aligned_cols=29  Identities=24%  Similarity=0.505  Sum_probs=18.7

Q ss_pred             CCccccccCccccCHHHHHHHHHHhcCCC
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHTGER  268 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  268 (330)
                      +.|.|.+|++.|.+..+|--||+.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            34667777777777777777766665443

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=6.5e-05  Score=40.47  Aligned_cols=26  Identities=19%  Similarity=0.456  Sum_probs=22.2

Q ss_pred             CCCCccccCCCccccCChHHHHHHHH
Q psy9959         278 EGEKCWKCELCPYASSSQRHLESHML  303 (330)
Q Consensus       278 ~~~k~~~C~~C~~~F~~~~~L~~H~~  303 (330)
                      +|-|||.|..|++.|..+.++.+|.-
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            35677889999999999999999964

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=5.5e-05  Score=36.99  Aligned_cols=27  Identities=22%  Similarity=0.595  Sum_probs=23.5

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCC
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      +||+|.+|...-.+.++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            578999999999999999999976444

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=0.00011  Score=39.61  Aligned_cols=24  Identities=25%  Similarity=0.468  Sum_probs=13.6

Q ss_pred             CCCCccccccCccccCHHHHHHHH
Q psy9959         238 HEKPHKCSICDYASVELSKMRNHM  261 (330)
Q Consensus       238 ~~~~~~C~~C~k~f~~~~~L~~H~  261 (330)
                      |-+||.|..|+|.|..+.++.+|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            445555555555555555555554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.25  E-value=0.00017  Score=35.02  Aligned_cols=27  Identities=41%  Similarity=0.645  Sum_probs=16.6

Q ss_pred             CccccccCccccCHHHHHHHHHHhcCC
Q psy9959         241 PHKCSICDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       241 ~~~C~~C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      .|.|..|...|..+-.|+.||-.|+|+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            456666666666666666666666553

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.22  E-value=0.00013  Score=36.48  Aligned_cols=27  Identities=33%  Similarity=0.673  Sum_probs=18.6

Q ss_pred             ceecCccccccCChHHHHHHHhhhcCC
Q psy9959         212 PHKCKYCESRFTTSGELVRHVRYKHTH  238 (330)
Q Consensus       212 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  238 (330)
                      ||.|.+|++.|.....|.+|....|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            567777777777777777776655654

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.0002  Score=34.99  Aligned_cols=27  Identities=30%  Similarity=0.824  Sum_probs=19.4

Q ss_pred             CCccccccCccccCHHHHHHHHHHhcC
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~~  266 (330)
                      +||+|.+|.....+.++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            467777777777777777777766554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.00016  Score=35.20  Aligned_cols=23  Identities=26%  Similarity=0.743  Sum_probs=13.8

Q ss_pred             CccccccCccccCHHHHHHHHHH
Q psy9959         241 PHKCSICDYASVELSKMRNHMRS  263 (330)
Q Consensus       241 ~~~C~~C~k~f~~~~~L~~H~~~  263 (330)
                      ||.|..|...|..+.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            45566666666666666666654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.04  E-value=0.00015  Score=35.40  Aligned_cols=28  Identities=36%  Similarity=0.701  Sum_probs=19.3

Q ss_pred             CCccccc--cCccccCHHHHHHHHHHhcCC
Q psy9959         240 KPHKCSI--CDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       240 ~~~~C~~--C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      +||.|..  |.|.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4666655  777777777777777777664

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=5.5e-05  Score=37.92  Aligned_cols=21  Identities=29%  Similarity=0.444  Sum_probs=10.3

Q ss_pred             Cccccc--cCccccCHHHHHHHH
Q psy9959         241 PHKCSI--CDYASVELSKMRNHM  261 (330)
Q Consensus       241 ~~~C~~--C~k~f~~~~~L~~H~  261 (330)
                      ||.|.+  |.|+|.+.++-..|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            444444  555555555444454

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.99  E-value=0.00023  Score=33.11  Aligned_cols=22  Identities=32%  Similarity=0.688  Sum_probs=20.3

Q ss_pred             ccccCCCccccCChHHHHHHHH
Q psy9959         282 CWKCELCPYASSSQRHLESHML  303 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~  303 (330)
                      ||+|.-|...|..+..|..||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6899999999999999999984

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00033  Score=37.16  Aligned_cols=28  Identities=25%  Similarity=0.419  Sum_probs=24.2

Q ss_pred             CCCcccc--CCCccccCChHHHHHHHHHcC
Q psy9959         279 GEKCWKC--ELCPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       279 ~~k~~~C--~~C~~~F~~~~~L~~H~~~H~  306 (330)
                      .+|||.|  +-|+.+|.+..+|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4678899  559999999999999998874

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.00079  Score=32.33  Aligned_cols=25  Identities=40%  Similarity=0.628  Sum_probs=22.8

Q ss_pred             cccCCCccccCChHHHHHHHHHcCC
Q psy9959         283 WKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      -+|+.|.++..++..|+.|.|+|-.
T Consensus         3 ekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             ccCcccccccCcHHHHHHhhccccC
Confidence            4799999999999999999999953

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.54  E-value=0.0012  Score=31.42  Aligned_cols=23  Identities=17%  Similarity=0.446  Sum_probs=17.8

Q ss_pred             CccccccCccccCHHHHHHHHHH
Q psy9959         241 PHKCSICDYASVELSKMRNHMRS  263 (330)
Q Consensus       241 ~~~C~~C~k~f~~~~~L~~H~~~  263 (330)
                      ||+|..||+.|..+.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            57788888888888888877654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.00073  Score=37.70  Aligned_cols=25  Identities=24%  Similarity=0.408  Sum_probs=22.8

Q ss_pred             ccccCCCccccCChHHHHHHHHHcC
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~  306 (330)
                      .|.|..|||.|.....|+.|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4789999999999999999998874

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.48  E-value=0.0012  Score=30.61  Aligned_cols=23  Identities=30%  Similarity=0.621  Sum_probs=17.2

Q ss_pred             CccccccCccccCHHHHHHHHHH
Q psy9959         241 PHKCSICDYASVELSKMRNHMRS  263 (330)
Q Consensus       241 ~~~C~~C~k~f~~~~~L~~H~~~  263 (330)
                      ||+|..|...|..+..|..||..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            67777787778777777777643

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.42  E-value=0.001  Score=31.65  Aligned_cols=22  Identities=18%  Similarity=0.324  Sum_probs=18.4

Q ss_pred             ccccCCCccccCChHHHHHHHH
Q psy9959         282 CWKCELCPYASSSQRHLESHML  303 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~  303 (330)
                      ||+|..||+.|-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4788889998888888888864

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.0012  Score=36.81  Aligned_cols=26  Identities=19%  Similarity=0.477  Sum_probs=23.0

Q ss_pred             CCccccccCccccCHHHHHHHHHHhc
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h~  265 (330)
                      .-|.|..|+|.|.....|++|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35889999999999999999998874

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.0015  Score=31.29  Aligned_cols=24  Identities=42%  Similarity=0.814  Sum_probs=17.7

Q ss_pred             CccccccCccccCHHHHHHHHHHh
Q psy9959         241 PHKCSICDYASVELSKMRNHMRSH  264 (330)
Q Consensus       241 ~~~C~~C~k~f~~~~~L~~H~~~h  264 (330)
                      |-+|+.|.+...++.+|+.|.|+|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            456777777777777777777776

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0025  Score=32.51  Aligned_cols=26  Identities=12%  Similarity=0.270  Sum_probs=23.0

Q ss_pred             ccccCCCccccCChHHHHHHHHHcCC
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHTD  307 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~~  307 (330)
                      .|.|..||++|.++..+.+|-...+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48899999999999999999877665

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.003  Score=33.41  Aligned_cols=27  Identities=22%  Similarity=0.454  Sum_probs=17.7

Q ss_pred             CCCcccc--ccCccccCHHHHHHHHHHhc
Q psy9959         239 EKPHKCS--ICDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       239 ~~~~~C~--~C~k~f~~~~~L~~H~~~h~  265 (330)
                      ++||.|.  -|+..|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            5667773  37777777777777766653

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.92  E-value=0.003  Score=29.40  Aligned_cols=22  Identities=18%  Similarity=0.551  Sum_probs=20.5

Q ss_pred             cccCCCccccCChHHHHHHHHH
Q psy9959         283 WKCELCPYASSSQRHLESHMLI  304 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~  304 (330)
                      |.|+.|-+.|+++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999976

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.81  E-value=0.0043  Score=30.64  Aligned_cols=28  Identities=39%  Similarity=0.594  Sum_probs=21.3

Q ss_pred             CCccccc--cCccccCHHHHHHHHHHhcCC
Q psy9959         240 KPHKCSI--CDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       240 ~~~~C~~--C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      +.|.|.+  |+..|...+.|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            3466755  888888888888888888774

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.80  E-value=0.0046  Score=29.49  Aligned_cols=22  Identities=27%  Similarity=0.563  Sum_probs=14.6

Q ss_pred             ccccccCccccCHHHHHHHHHH
Q psy9959         242 HKCSICDYASVELSKMRNHMRS  263 (330)
Q Consensus       242 ~~C~~C~k~f~~~~~L~~H~~~  263 (330)
                      |+|+.|+.....+++|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            5666666666666666666654

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.74  E-value=0.0047  Score=29.44  Aligned_cols=25  Identities=24%  Similarity=0.608  Sum_probs=19.6

Q ss_pred             eecCccccccCChHHHHHHHhhhcC
Q psy9959         213 HKCKYCESRFTTSGELVRHVRYKHT  237 (330)
Q Consensus       213 ~~C~~C~~~f~~~~~l~~H~~~~H~  237 (330)
                      |+|+.|+.....++.|..|++..|+
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             ccCCcchhheeehhhhhHHhhhccc
Confidence            7788888888888888888876553

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.61  E-value=0.0025  Score=33.01  Aligned_cols=24  Identities=29%  Similarity=0.249  Sum_probs=20.2

Q ss_pred             cCCCccccCChHHHHHHHHHcCCC
Q psy9959         285 CELCPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       285 C~~C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      |..=++.|.....|..|||+|+|+
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444456799999999999999986

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.0042  Score=32.12  Aligned_cols=21  Identities=33%  Similarity=0.227  Sum_probs=15.5

Q ss_pred             cCccccCHHHHHHHHHHhcCC
Q psy9959         247 CDYASVELSKMRNHMRSHTGE  267 (330)
Q Consensus       247 C~k~f~~~~~L~~H~~~h~~~  267 (330)
                      =++.|.....|..|||.|+|+
T Consensus        13 ~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCcchhHHHHHHHHhhcCCC
Confidence            345677888888888888775

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.29  E-value=0.0048  Score=30.45  Aligned_cols=28  Identities=29%  Similarity=0.564  Sum_probs=24.5

Q ss_pred             CccccCC--CccccCChHHHHHHHHHcCCC
Q psy9959         281 KCWKCEL--CPYASSSQRHLESHMLIHTDQ  308 (330)
Q Consensus       281 k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  308 (330)
                      |.|.|..  |+..|.....|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            3477876  999999999999999999885

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.0081  Score=30.55  Aligned_cols=26  Identities=31%  Similarity=0.560  Sum_probs=19.6

Q ss_pred             cccccccCcccCChhHHHHHHhhhCC
Q psy9959         156 AHMCNYCNYTSPKRYLLARHLKSHSE  181 (330)
Q Consensus       156 ~~~C~~C~~~f~~~~~l~~H~~~h~~  181 (330)
                      .|.|..|+++|..+..+.+|...-.+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47788888888888888888765443

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.22  E-value=0.0088  Score=27.75  Aligned_cols=23  Identities=26%  Similarity=0.626  Sum_probs=12.7

Q ss_pred             eecCccccccCChHHHHHHHhhh
Q psy9959         213 HKCKYCESRFTTSGELVRHVRYK  235 (330)
Q Consensus       213 ~~C~~C~~~f~~~~~l~~H~~~~  235 (330)
                      |.|+.|-+.|..+.++..|.+..
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            45555555555555555555543

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.016  Score=28.00  Aligned_cols=23  Identities=22%  Similarity=0.469  Sum_probs=11.6

Q ss_pred             ccccccCccccCHHHHHHHHHHh
Q psy9959         242 HKCSICDYASVELSKMRNHMRSH  264 (330)
Q Consensus       242 ~~C~~C~k~f~~~~~L~~H~~~h  264 (330)
                      |.|..|||...+...++.|+...
T Consensus         3 ftc~hcgkqlks~~gmkyhvmad   25 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMAN   25 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEeec
Confidence            44555555555555555554443

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.92  E-value=0.0065  Score=29.15  Aligned_cols=22  Identities=32%  Similarity=0.628  Sum_probs=16.9

Q ss_pred             cccc--cCccccCHHHHHHHHHHh
Q psy9959         243 KCSI--CDYASVELSKMRNHMRSH  264 (330)
Q Consensus       243 ~C~~--C~k~f~~~~~L~~H~~~h  264 (330)
                      .|+.  |+|.|...++++.|+.+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            3554  888888888888888766

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.60  E-value=0.012  Score=28.23  Aligned_cols=22  Identities=18%  Similarity=0.449  Sum_probs=19.4

Q ss_pred             cCC--CccccCChHHHHHHHHHcC
Q psy9959         285 CEL--CPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       285 C~~--C~~~F~~~~~L~~H~~~H~  306 (330)
                      |+.  |++.|...+.++.|+.+|.
T Consensus         4 CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           4 CPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             CCcccHHHHhhchHHHHHHhhccC
Confidence            655  9999999999999998883

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.40  E-value=0.011  Score=29.67  Aligned_cols=22  Identities=36%  Similarity=0.477  Sum_probs=19.8

Q ss_pred             ccccCCCccccCChHHHHHHHH
Q psy9959         282 CWKCELCPYASSSQRHLESHML  303 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~  303 (330)
                      .|.|.-||..|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4889999999999999999863

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.29  E-value=0.017  Score=27.24  Aligned_cols=24  Identities=29%  Similarity=0.463  Sum_probs=18.0

Q ss_pred             ccccc--cCccccCHHHHHHHHHHhc
Q psy9959         242 HKCSI--CDYASVELSKMRNHMRSHT  265 (330)
Q Consensus       242 ~~C~~--C~k~f~~~~~L~~H~~~h~  265 (330)
                      |.|..  |+++|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            45544  8888888888888887775

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.18  E-value=0.015  Score=29.70  Aligned_cols=26  Identities=19%  Similarity=0.591  Sum_probs=23.0

Q ss_pred             CCCccccCCCccccCChHHHHHHHHH
Q psy9959         279 GEKCWKCELCPYASSSQRHLESHMLI  304 (330)
Q Consensus       279 ~~k~~~C~~C~~~F~~~~~L~~H~~~  304 (330)
                      |+..|.|.+|.+.|+..+++-+|..+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            45568999999999999999999865

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.92  E-value=0.015  Score=27.42  Aligned_cols=24  Identities=29%  Similarity=0.618  Sum_probs=20.3

Q ss_pred             cccCC--CccccCChHHHHHHHHHcC
Q psy9959         283 WKCEL--CPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       283 ~~C~~--C~~~F~~~~~L~~H~~~H~  306 (330)
                      |.|..  |+++|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            45644  9999999999999998885

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.82  E-value=0.038  Score=26.66  Aligned_cols=23  Identities=17%  Similarity=0.443  Sum_probs=20.6

Q ss_pred             cccCCCccccCChHHHHHHHHHc
Q psy9959         283 WKCELCPYASSSQRHLESHMLIH  305 (330)
Q Consensus       283 ~~C~~C~~~F~~~~~L~~H~~~H  305 (330)
                      |.|..||+...+...++-|+..-
T Consensus         3 ftc~hcgkqlks~~gmkyhvmad   25 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMAN   25 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEeec
Confidence            78999999999999999998653

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.78  E-value=0.0083  Score=30.20  Aligned_cols=21  Identities=14%  Similarity=0.232  Sum_probs=19.3

Q ss_pred             CcccccCChhhHhhhhHhhcC
Q psy9959         310 PYLCDHCDQIRILICVIIAIR  330 (330)
Q Consensus       310 p~~C~~C~~~f~~~~~l~~H~  330 (330)
                      .|.|+.||-+|.+.+.|.+|.
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            499999999999999999984

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.59  E-value=0.034  Score=30.69  Aligned_cols=31  Identities=23%  Similarity=0.379  Sum_probs=24.6

Q ss_pred             CCCccccCCCccccCChHHHHHHHHHcCCCC
Q psy9959         279 GEKCWKCELCPYASSSQRHLESHMLIHTDQK  309 (330)
Q Consensus       279 ~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  309 (330)
                      .+.|-.|++|+....+..+|++|+..-+-.+
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            3556789999999999999999996633333

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.41  E-value=0.015  Score=31.11  Aligned_cols=26  Identities=31%  Similarity=0.833  Sum_probs=20.8

Q ss_pred             CccccCCCccccCChHHHHHHHHHcCCCCCcccccCChh
Q psy9959         281 KCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQI  319 (330)
Q Consensus       281 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~  319 (330)
                      +.|.|..||..             |.|+.|-.||+||..
T Consensus         4 ~~~~C~vCG~i-------------~~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           4 KVYICPICGYT-------------AVDEAPEYCPVCGAP   29 (37)
T ss_dssp             CEEECTTTCCE-------------EESCCCSBCTTTCCB
T ss_pred             cEEECCCCCCE-------------ecCCCCCcCCCCCCc
Confidence            45899999974             456788999999954

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.32  E-value=0.049  Score=30.01  Aligned_cols=25  Identities=24%  Similarity=0.571  Sum_probs=12.1

Q ss_pred             CCccccccCccccCHHHHHHHHHHh
Q psy9959         240 KPHKCSICDYASVELSKMRNHMRSH  264 (330)
Q Consensus       240 ~~~~C~~C~k~f~~~~~L~~H~~~h  264 (330)
                      .|-.|+.|+.......+|++|+...
T Consensus        23 qpatcpic~avirqsrnlrrhlel~   47 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLELR   47 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHH
Confidence            3444555555555555555554443

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.22  E-value=0.017  Score=34.87  Aligned_cols=38  Identities=13%  Similarity=0.423  Sum_probs=27.4

Q ss_pred             CCCCccccCCCccccCChHHHHHHHHHcCCCCCcccccCCh
Q psy9959         278 EGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQ  318 (330)
Q Consensus       278 ~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~  318 (330)
                      +....|.|+.|+++|+....+.-   .-...-.|.|.+|+-
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHT   47 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCC
T ss_pred             ccCCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCC
Confidence            44566999999999997766543   222344699999984

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.72  E-value=0.014  Score=35.89  Aligned_cols=25  Identities=16%  Similarity=0.284  Sum_probs=21.7

Q ss_pred             CCccccCCCccccCChHHHHHHHHH
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLI  304 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~  304 (330)
                      .-.|.|..|++.|.+...|..|+++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCEEecccccCccCCHHHHHHHHcc
Confidence            3448899999999999999999864

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=92.52  E-value=0.024  Score=30.10  Aligned_cols=27  Identities=26%  Similarity=0.583  Sum_probs=21.0

Q ss_pred             CCccccCCCccccCChHHHHHHHHHcCCCCCcccccCChh
Q psy9959         280 EKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQI  319 (330)
Q Consensus       280 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~p~~C~~C~~~  319 (330)
                      ++.|.|..||..             |.|+.|-.||+||..
T Consensus         3 ~~~~vC~vCGyi-------------~~g~~Pe~CPvCg~~   29 (36)
T d1yuza2           3 DKFHLCPICGYI-------------HKGEDFEKCPICFRP   29 (36)
T ss_dssp             CCEEECSSSCCE-------------EESSCCSBCTTTCCB
T ss_pred             CCEEECCCCCCE-------------eeCCCCCcCCCCCCc
Confidence            455899999964             457788999999953

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.39  E-value=0.058  Score=27.42  Aligned_cols=28  Identities=25%  Similarity=0.514  Sum_probs=17.5

Q ss_pred             cCceecCccccccCChHHHHHHHhhhcC
Q psy9959         210 VKPHKCKYCESRFTTSGELVRHVRYKHT  237 (330)
Q Consensus       210 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~  237 (330)
                      +..|.|..|.+.|...+++-+|..+.|.
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            3456666666666666666666655443

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.41  E-value=0.074  Score=25.51  Aligned_cols=19  Identities=21%  Similarity=0.177  Sum_probs=16.7

Q ss_pred             CCCccccCChHHHHHHHHH
Q psy9959         286 ELCPYASSSQRHLESHMLI  304 (330)
Q Consensus       286 ~~C~~~F~~~~~L~~H~~~  304 (330)
                      +-||+.|+++..|..|.+.
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            3499999999999999875

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.20  E-value=0.045  Score=32.98  Aligned_cols=35  Identities=14%  Similarity=0.275  Sum_probs=18.6

Q ss_pred             cccccccCcccCChhHHHHHHhhhCCCCCeeeccCccc
Q psy9959         156 AHMCNYCNYTSPKRYLLARHLKSHSEERPHKCSVCERG  193 (330)
Q Consensus       156 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  193 (330)
                      .|.|+.|++.|+....+   ...-.....|.|..|+..
T Consensus        14 ~y~Cp~C~~~ys~Lda~---~L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          14 SFKCPVCSSTFTDLEAN---QLFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             EEECSSSCCEEEHHHHH---HHEETTTTEEBCSSSCCB
T ss_pred             ceECCCCCCCcchhhHH---HhcCcCCCeEEecCCCCE
Confidence            37777777776553322   222233345677776543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.97  E-value=0.09  Score=31.22  Aligned_cols=28  Identities=29%  Similarity=0.559  Sum_probs=24.7

Q ss_pred             CCCccccCCCccccCChHHHHHHHHHcC
Q psy9959         279 GEKCWKCELCPYASSSQRHLESHMLIHT  306 (330)
Q Consensus       279 ~~k~~~C~~C~~~F~~~~~L~~H~~~H~  306 (330)
                      ....|+|..|...|.+...|..|+..|.
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhcc
Confidence            3456999999999999999999998885

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.05  E-value=0.059  Score=33.03  Aligned_cols=24  Identities=25%  Similarity=0.301  Sum_probs=19.6

Q ss_pred             CcccccccCcccCChhHHHHHHhh
Q psy9959         155 PAHMCNYCNYTSPKRYLLARHLKS  178 (330)
Q Consensus       155 ~~~~C~~C~~~f~~~~~l~~H~~~  178 (330)
                      ..|.|..|++.|.+...|..|+++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            348899999999998888888764

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.50  E-value=0.13  Score=24.62  Aligned_cols=22  Identities=27%  Similarity=0.496  Sum_probs=15.2

Q ss_pred             CccccccCChHHHHHHHhhhcC
Q psy9959         216 KYCESRFTTSGELVRHVRYKHT  237 (330)
Q Consensus       216 ~~C~~~f~~~~~l~~H~~~~H~  237 (330)
                      +-|++.|+++..|..|.+..|.
T Consensus         6 ~gc~kifsnrqylnhh~kyqh~   27 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKYQHI   27 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHHGGG
T ss_pred             CCchhhhccHHHHHhHHHHHHh
Confidence            3477777777777777766553

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.92  E-value=0.3  Score=28.88  Aligned_cols=28  Identities=18%  Similarity=0.451  Sum_probs=22.5

Q ss_pred             CCCccccccCccccCHHHHHHHHHHhcC
Q psy9959         239 EKPHKCSICDYASVELSKMRNHMRSHTG  266 (330)
Q Consensus       239 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~  266 (330)
                      ...|+|.+|...|.+...|..|+..|..
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccH
Confidence            3458888888888888888888888764

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.51  E-value=0.45  Score=22.77  Aligned_cols=22  Identities=14%  Similarity=0.525  Sum_probs=18.7

Q ss_pred             cccCC--CccccCChHHHHHHHHH
Q psy9959         283 WKCEL--CPYASSSQRHLESHMLI  304 (330)
Q Consensus       283 ~~C~~--C~~~F~~~~~L~~H~~~  304 (330)
                      |.|.-  |..+|.++.++..|...
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHH
T ss_pred             ccccCCCcceEEeehHHHHHHHhh
Confidence            67764  99999999999999854

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=83.88  E-value=0.18  Score=28.06  Aligned_cols=34  Identities=18%  Similarity=0.440  Sum_probs=20.5

Q ss_pred             ccccCCCccccCChHHHHHHHHHcC--CCCCcccccCChh
Q psy9959         282 CWKCELCPYASSSQRHLESHMLIHT--DQKPYLCDHCDQI  319 (330)
Q Consensus       282 ~~~C~~C~~~F~~~~~L~~H~~~H~--~~~p~~C~~C~~~  319 (330)
                      .|.|..||..|.-...=    -+--  --.-|.|++||-.
T Consensus         3 ~y~C~~CgyiYd~~~Gd----gt~Fe~LP~dw~CP~C~a~   38 (45)
T d6rxna_           3 KYVCNVCGYEYDPAEHD----NVPFDQLPDDWCCPVCGVS   38 (45)
T ss_dssp             CEEETTTCCEECGGGGT----TCCGGGSCTTCBCTTTCCB
T ss_pred             CeEeCCCCeEECcccCC----CCCHHHCCCCCCCcCCCCc
Confidence            48999999988653220    0000  0123789999853

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=83.04  E-value=0.88  Score=21.68  Aligned_cols=19  Identities=37%  Similarity=0.726  Sum_probs=10.2

Q ss_pred             cccccCChHHHHHHHhhhc
Q psy9959         218 CESRFTTSGELVRHVRYKH  236 (330)
Q Consensus       218 C~~~f~~~~~l~~H~~~~H  236 (330)
                      |+.+|.++.+++.|....|
T Consensus        10 cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3          10 CDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             CCCEESSHHHHHHHHHHHT
T ss_pred             cceEEeehHHHHHHHhhhc
Confidence            5555555555555554433

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=80.57  E-value=0.53  Score=24.84  Aligned_cols=9  Identities=11%  Similarity=-0.016  Sum_probs=4.2

Q ss_pred             eeccCcccc
Q psy9959         186 KCSVCERGF  194 (330)
Q Consensus       186 ~C~~C~~~f  194 (330)
                      .|+.||..|
T Consensus         4 vc~~cG~~Y   12 (37)
T d2ak3a2           4 IHPGSGRVY   12 (37)
T ss_dssp             EETTTTEEE
T ss_pred             eeCCcCChh
Confidence            444444444

>d2dkta1 g.89.1.1 (A:8-81) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: CHY zinc finger-like
superfamily: CHY zinc finger-like
family: CHY zinc finger
domain: RING finger and CHY zinc finger domain-containing protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.36  E-value=0.87  Score=28.27  Aligned_cols=13  Identities=38%  Similarity=0.654  Sum_probs=7.8

Q ss_pred             CcCceecCccccc
Q psy9959         209 GVKPHKCKYCESR  221 (330)
Q Consensus       209 ~~~~~~C~~C~~~  221 (330)
                      ..+.+.|..|+..
T Consensus        48 ~~~~l~CH~Cg~~   60 (74)
T d2dkta1          48 KVKEVQCINCEKL   60 (74)
T ss_dssp             SCCCEEESSSCCE
T ss_pred             cCCEEEeccCCCc
Confidence            3455677777654