254780195
CTP synthetase
| GeneID in NCBI database: | 8209176 | Locus tag: | CLIBASIA_00400 |
| Protein GI in NCBI database: | 254780195 | Protein Accession: | YP_003064608.1 |
| Gene range: | -(85675, 87309) | Protein Length: | 544aa |
| Gene description: | CTP synthetase | ||
| COG prediction: | none | ||
| KEGG prediction: | pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] | ||
| SEED prediction: | CTP synthase (EC 6.3.4.2) | ||
| Pathway involved in KEGG: | Pyrimidine metabolism [PATH:las00240] | ||
| Subsystem involved in SEED: | pyrimidine conversions | ||
| sequence | sequence profile | ||
Prediction of Local Sequence Properties
| Source | Summary | Result |
|---|
|
|
Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
| Identity | Alignment graph | Length | Definition | E-value | |
| Target | 544 | CTP synthetase [Candidatus Liberibacter asiaticus str. | |||
| 254780414 | 520 | GMP synthase [Candidatus Liberibacter asiaticus st | 0.007 |
| >gi|254780414|ref|YP_003064827.1| GMP synthase [Candidatus Liberibacter asiaticus str. psy62] Length = 520 | Back alignment |
|---|
Score = 33.9 bits (76), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 373 ENKIPFLGICFGMQMAVIEAARNLAG-IPNACSTEFSEAGVPVIA----LMSEWMKGDQQ 427
E+ IP LGIC+G Q+ ++L G N+ S EF A + + L W KG +Q
Sbjct: 77 ESNIPLLGICYGQQI----MCQSLGGKTKNSQSREFGRAFIEIKKNCSLLKGMWEKGSKQ 132
Query: 428 EKRLPSDD 435
+ + D
Sbjct: 133 QVWMSHGD 140
|
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
| Identity | Alignment graph | Length | Definition | Round | E-value |
| Target | 544 | CTP synthetase [Candidatus Liberibacter asiaticus str. | |||
| 315122622 | 546 | CTP synthetase [Candidatus Liberibacter solanacearum CL | 1 | 0.0 | |
| 190891862 | 542 | CTP synthase protein [Rhizobium etli CIAT 652] Length = | 1 | 0.0 | |
| 15888931 | 578 | CTP synthetase [Agrobacterium tumefaciens str. C58] Len | 1 | 0.0 | |
| 86357800 | 542 | CTP synthetase [Rhizobium etli CFN 42] Length = 542 | 1 | 0.0 | |
| 24212127 | 542 | RecName: Full=CTP synthase; AltName: Full=CTP synthetas | 1 | 0.0 | |
| 325293008 | 542 | CTP synthase [Agrobacterium sp. H13-3] Length = 542 | 1 | 0.0 | |
| 222086037 | 566 | CTP synthase [Agrobacterium radiobacter K84] Length = 5 | 1 | 0.0 | |
| 150396290 | 542 | CTP synthetase [Sinorhizobium medicae WSM419] Length = | 1 | 0.0 | |
| 222148651 | 555 | CTP synthetase [Agrobacterium vitis S4] Length = 555 | 1 | 0.0 | |
| 209549426 | 542 | CTP synthetase [Rhizobium leguminosarum bv. trifolii WS | 1 | 0.0 |
| >gi|315122622|ref|YP_004063111.1| CTP synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 546 | Back alignment and organism information |
|---|
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/542 (82%), Positives = 490/542 (90%)
Query: 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVF 60
MV+YIFITGGVVSSLGKGVAAASLGALLQA +YKVRVRKLDPYLN+DPGTMSP+QHGEVF
Sbjct: 1 MVRYIFITGGVVSSLGKGVAAASLGALLQARQYKVRVRKLDPYLNTDPGTMSPMQHGEVF 60
Query: 61 VTDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTN 120
VTDDG EADLD GHYERFM IS+AK DNIT GRIY +VID+ERRGDYLG TVQVIPHVTN
Sbjct: 61 VTDDGAEADLDLGHYERFMNISSAKTDNITTGRIYNSVIDKERRGDYLGATVQVIPHVTN 120
Query: 121 EIKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
EIKEFIT+GNED DFVICEIGGT+GDIE MPFVEAIRQ GNE + GS+ LY+HLTLMPY
Sbjct: 121 EIKEFITKGNEDVDFVICEIGGTVGDIEAMPFVEAIRQLGNELLYHGSRPLYMHLTLMPY 180
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
I+SSGELKTKPTQ SVKELQALGVHPDILLIR DR+IPEMERRK+SLFCNVPMSAVI AL
Sbjct: 181 IKSSGELKTKPTQRSVKELQALGVHPDILLIRVDREIPEMERRKLSLFCNVPMSAVIQAL 240
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKY 300
DVDDIYK+P++YH EG+DSV+L+ FGI++ PQ+ NW FCD LSLKNEVK+AIVGKY
Sbjct: 241 DVDDIYKIPITYHHEGMDSVILDTFGIKDAQAPQLQNWHVFCDHILSLKNEVKIAIVGKY 300
Query: 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG 360
HLKDAYRSLIEALRH G++N+TKVQL WIDA LEKEDP H VHGILVPGGF KRG
Sbjct: 301 THLKDAYRSLIEALRHGGINNHTKVQLLWIDAGALEKEDPAIHLREVHGILVPGGFDKRG 360
Query: 361 SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSE 420
SEGKI AIKFARENKIPFLGICFGMQMAV+EAARNL GI +ACSTEFSE G PVIALMSE
Sbjct: 361 SEGKIVAIKFARENKIPFLGICFGMQMAVVEAARNLVGIHDACSTEFSEPGEPVIALMSE 420
Query: 421 WMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYRE 480
WMK Q+EKRL SDDLGATMRLGAYD+SLKE++LIS+IY LDLI ERHRHRYEVN+ Y+E
Sbjct: 421 WMKEGQKEKRLVSDDLGATMRLGAYDISLKEKSLISKIYNLDLISERHRHRYEVNLNYKE 480
Query: 481 KLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLY 540
KLE CGLKFSGFS+D+ALPEVVEYINHPWFIGVQYHPELKSRPL+PHPLF+SF+QAT+ Y
Sbjct: 481 KLEECGLKFSGFSIDNALPEVVEYINHPWFIGVQYHPELKSRPLNPHPLFISFVQATLSY 540
Query: 541 SQ 542
SQ
Sbjct: 541 SQ 542
|
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|190891862|ref|YP_001978404.1| CTP synthase protein [Rhizobium etli CIAT 652] Length = 542 | Back alignment and organism information |
|---|
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/542 (69%), Positives = 445/542 (82%), Gaps = 2/542 (0%)
Query: 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVF 60
M +Y+FITGGVVSSLGKG+AAA+LGALLQA Y+VR+RKLDPYLN DPGTMSP QHGEVF
Sbjct: 1 MARYVFITGGVVSSLGKGIAAAALGALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVF 60
Query: 61 VTDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTN 120
VTDDG E DLD GHYERF G S K DNIT GRIYKN+ID+ERRGDYLG TVQVIPHVTN
Sbjct: 61 VTDDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTN 120
Query: 121 EIKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
EIK+F+T+GN+D DFVICEIGGT+GDIE MPF+EAIRQ GN+ RG+ A+Y+HLTLMPY
Sbjct: 121 EIKDFVTEGNKDYDFVICEIGGTVGDIEAMPFMEAIRQLGNDLP-RGT-AVYVHLTLMPY 178
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
I ++GELKTKPTQHSVKELQALG+HPDILL+RADR+IPE ERRK+SLFCNV SAVI AL
Sbjct: 179 IPAAGELKTKPTQHSVKELQALGIHPDILLVRADREIPEAERRKLSLFCNVRPSAVIQAL 238
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKY 300
DV +IY VP++YH+EG+D VL AFGIE P++D W+ C+R + + EV +AIVGKY
Sbjct: 239 DVANIYDVPMAYHKEGLDDEVLAAFGIEPAPKPRLDQWEEVCNRIRTPEGEVTIAIVGKY 298
Query: 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG 360
LKDAY+SLIEAL H G++N KV+L WI++E EKEDP + VHGILVPGGFG+RG
Sbjct: 299 TGLKDAYKSLIEALHHGGIANRVKVKLEWIESEVFEKEDPAPYLEKVHGILVPGGFGERG 358
Query: 361 SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSE 420
SEGKI A +FARE K+P+ GICFGMQMAVIEAARNLA +P+A STEF A PV+ LM+E
Sbjct: 359 SEGKIHAARFARERKVPYFGICFGMQMAVIEAARNLADVPDASSTEFGPAKEPVVGLMTE 418
Query: 421 WMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYRE 480
W+KG++ +KR + DLG TMRLGAY +LK+ T IS IYG I ERHRHRYEVN+ Y++
Sbjct: 419 WVKGNELQKRTAAGDLGGTMRLGAYKAALKKGTKISEIYGSTDISERHRHRYEVNIDYKD 478
Query: 481 KLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLY 540
+LE CGL FSG S D LPE +EY +HPWFIGVQYHPELKSRPLDPHPLF SFI+A
Sbjct: 479 RLESCGLVFSGMSPDGVLPETIEYPDHPWFIGVQYHPELKSRPLDPHPLFASFIEAATEQ 538
Query: 541 SQ 542
S+
Sbjct: 539 SR 540
|
Species: Rhizobium etli Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|15888931|ref|NP_354612.1| CTP synthetase [Agrobacterium tumefaciens str. C58] Length = 578 | Back alignment and organism information |
|---|
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/542 (69%), Positives = 443/542 (81%), Gaps = 2/542 (0%)
Query: 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVF 60
M +Y+FITGGVVSSLGKG+AAA+LGALLQ+ Y+VR+RKLDPYLN DPGTMSP QHGEVF
Sbjct: 37 MARYVFITGGVVSSLGKGIAAAALGALLQSRGYRVRLRKLDPYLNVDPGTMSPTQHGEVF 96
Query: 61 VTDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTN 120
VTDDG E DLD GHYERF G S K DNIT GRIYKN+ID+ERRGDYLG TVQVIPHVTN
Sbjct: 97 VTDDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTN 156
Query: 121 EIKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
EIK+F+T+GN+D DFVICEIGGT+GDIE MPF+EAIRQ GN+ RG+ A+Y+HLTLMPY
Sbjct: 157 EIKDFVTEGNDDYDFVICEIGGTVGDIEAMPFMEAIRQLGNDLP-RGT-AIYVHLTLMPY 214
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
I ++GELKTKPTQHSVKELQALG+HPDILL+RADR+IPE ERRK+SLFCNV SAVI AL
Sbjct: 215 IPAAGELKTKPTQHSVKELQALGIHPDILLVRADREIPEAERRKLSLFCNVRPSAVIQAL 274
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKY 300
DV +IY VP++YH EG+DS VL AFGIE P+++ W+ C+R + + EV +AIVGKY
Sbjct: 275 DVANIYDVPIAYHNEGLDSEVLAAFGIEPAPKPRLEQWEEVCNRIRTPEGEVTIAIVGKY 334
Query: 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG 360
LKDAY+SLIEAL H G +N KV+L WI++E EKEDP + V+GILVPGGFG+RG
Sbjct: 335 TGLKDAYKSLIEALHHGGFANRVKVKLEWIESEVFEKEDPTPYLEKVNGILVPGGFGERG 394
Query: 361 SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSE 420
SEGKI A +FARE +P+ GICFGMQMAV+EAAR+LAGI NA STEF PV+ LM+E
Sbjct: 395 SEGKIMAAQFARERNVPYFGICFGMQMAVVEAARHLAGIENASSTEFGPTAEPVVGLMTE 454
Query: 421 WMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYRE 480
W+KG++ EKR DLG TMRLGAY +LK++T I+ IYG I ERHRHRYEVNV Y++
Sbjct: 455 WVKGNELEKRSTKGDLGGTMRLGAYKAALKKDTKIAEIYGTTDISERHRHRYEVNVDYKD 514
Query: 481 KLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLY 540
+LE CGL FSG S D LPE VEY +HPWFIGVQYHPELKSRPLDPHPLF SF++A V
Sbjct: 515 RLEECGLVFSGMSPDGVLPETVEYPDHPWFIGVQYHPELKSRPLDPHPLFASFVEAAVEQ 574
Query: 541 SQ 542
S+
Sbjct: 575 SR 576
|
Species: Agrobacterium tumefaciens Genus: Agrobacterium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|86357800|ref|YP_469692.1| CTP synthetase [Rhizobium etli CFN 42] Length = 542 | Back alignment and organism information |
|---|
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/542 (69%), Positives = 445/542 (82%), Gaps = 2/542 (0%)
Query: 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVF 60
M +Y+FITGGVVSSLGKG+AAA+LGALLQA Y+VR+RKLDPYLN DPGTMSP QHGEVF
Sbjct: 1 MARYVFITGGVVSSLGKGIAAAALGALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVF 60
Query: 61 VTDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTN 120
VTDDG E DLD GHYERF G S + DNIT GRIYKN+ID+ERRGDYLG TVQVIPHVTN
Sbjct: 61 VTDDGAETDLDLGHYERFTGRSATRTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTN 120
Query: 121 EIKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
EIK+F+T+GN+D DFVICEIGGT+GDIE MPF+EAIRQ GN+ RG+ A+Y+HLTLMPY
Sbjct: 121 EIKDFVTEGNQDYDFVICEIGGTVGDIEAMPFMEAIRQLGNDLP-RGT-AVYVHLTLMPY 178
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
I ++GELKTKPTQHSVKELQALG+HPDILL+RADR+IPE ERRK+SLFCNV SAVI AL
Sbjct: 179 IPAAGELKTKPTQHSVKELQALGIHPDILLVRADREIPEAERRKLSLFCNVRPSAVIQAL 238
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKY 300
DV +IY VP++YH+EG+D VL AFGIE P++D W+ C+R + + EV +AIVGKY
Sbjct: 239 DVANIYDVPMAYHKEGLDDEVLAAFGIEPAPKPRLDQWEEVCNRIRTPEGEVTIAIVGKY 298
Query: 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG 360
LKDAY+SLIEAL H G++N KV+L WI++E EKEDP + VHGILVPGGFG+RG
Sbjct: 299 TGLKDAYKSLIEALHHGGIANRVKVKLEWIESEVFEKEDPAPYLEKVHGILVPGGFGERG 358
Query: 361 SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSE 420
SEGKI A +FARE K+P+ GICFGMQMAVIEAARNLA +P+A STEF A PV+ LM+E
Sbjct: 359 SEGKIHAARFARERKVPYFGICFGMQMAVIEAARNLADVPDASSTEFGPAKEPVVGLMTE 418
Query: 421 WMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYRE 480
W+KG++ +KR + DLG TMRLGAY +LK+ T IS IYG I ERHRHRYEVN+ Y++
Sbjct: 419 WVKGNELQKRTAAGDLGGTMRLGAYKAALKKGTKISDIYGSTDISERHRHRYEVNIDYKD 478
Query: 481 KLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLY 540
+LE CGL FSG S D LPE +EY +HPWFIGVQYHPELKSRPLDPHPLF SFI+A
Sbjct: 479 RLESCGLVFSGMSPDGVLPETIEYPDHPWFIGVQYHPELKSRPLDPHPLFASFIEAATEQ 538
Query: 541 SQ 542
S+
Sbjct: 539 SR 540
|
Species: Rhizobium etli Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|24212127|sp|Q8UEY5|PYRG_AGRT5 RecName: Full=CTP synthase; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase Length = 542 | Back alignment and organism information |
|---|
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/542 (69%), Positives = 443/542 (81%), Gaps = 2/542 (0%)
Query: 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVF 60
M +Y+FITGGVVSSLGKG+AAA+LGALLQ+ Y+VR+RKLDPYLN DPGTMSP QHGEVF
Sbjct: 1 MARYVFITGGVVSSLGKGIAAAALGALLQSRGYRVRLRKLDPYLNVDPGTMSPTQHGEVF 60
Query: 61 VTDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTN 120
VTDDG E DLD GHYERF G S K DNIT GRIYKN+ID+ERRGDYLG TVQVIPHVTN
Sbjct: 61 VTDDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTN 120
Query: 121 EIKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
EIK+F+T+GN+D DFVICEIGGT+GDIE MPF+EAIRQ GN+ RG+ A+Y+HLTLMPY
Sbjct: 121 EIKDFVTEGNDDYDFVICEIGGTVGDIEAMPFMEAIRQLGNDLP-RGT-AIYVHLTLMPY 178
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
I ++GELKTKPTQHSVKELQALG+HPDILL+RADR+IPE ERRK+SLFCNV SAVI AL
Sbjct: 179 IPAAGELKTKPTQHSVKELQALGIHPDILLVRADREIPEAERRKLSLFCNVRPSAVIQAL 238
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKY 300
DV +IY VP++YH EG+DS VL AFGIE P+++ W+ C+R + + EV +AIVGKY
Sbjct: 239 DVANIYDVPIAYHNEGLDSEVLAAFGIEPAPKPRLEQWEEVCNRIRTPEGEVTIAIVGKY 298
Query: 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG 360
LKDAY+SLIEAL H G +N KV+L WI++E EKEDP + V+GILVPGGFG+RG
Sbjct: 299 TGLKDAYKSLIEALHHGGFANRVKVKLEWIESEVFEKEDPTPYLEKVNGILVPGGFGERG 358
Query: 361 SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSE 420
SEGKI A +FARE +P+ GICFGMQMAV+EAAR+LAGI NA STEF PV+ LM+E
Sbjct: 359 SEGKIMAAQFARERNVPYFGICFGMQMAVVEAARHLAGIENASSTEFGPTAEPVVGLMTE 418
Query: 421 WMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYRE 480
W+KG++ EKR DLG TMRLGAY +LK++T I+ IYG I ERHRHRYEVNV Y++
Sbjct: 419 WVKGNELEKRSTKGDLGGTMRLGAYKAALKKDTKIAEIYGTTDISERHRHRYEVNVDYKD 478
Query: 481 KLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLY 540
+LE CGL FSG S D LPE VEY +HPWFIGVQYHPELKSRPLDPHPLF SF++A V
Sbjct: 479 RLEECGLVFSGMSPDGVLPETVEYPDHPWFIGVQYHPELKSRPLDPHPLFASFVEAAVEQ 538
Query: 541 SQ 542
S+
Sbjct: 539 SR 540
|
Species: Agrobacterium tumefaciens Genus: Agrobacterium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|325293008|ref|YP_004278872.1| CTP synthase [Agrobacterium sp. H13-3] Length = 542 | Back alignment and organism information |
|---|
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/542 (69%), Positives = 443/542 (81%), Gaps = 2/542 (0%)
Query: 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVF 60
M +Y+FITGGVVSSLGKG+AAA+LGALLQ+ Y+VR+RKLDPYLN DPGTMSP QHGEVF
Sbjct: 1 MARYVFITGGVVSSLGKGIAAAALGALLQSRGYRVRLRKLDPYLNVDPGTMSPTQHGEVF 60
Query: 61 VTDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTN 120
VTDDG E DLD GHYERF G S K DNIT GRIYKN+ID+ERRGDYLG TVQVIPHVTN
Sbjct: 61 VTDDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTN 120
Query: 121 EIKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
EIK+F+T+GN+D DFVICEIGGT+GDIE MPF+EAIRQ GN+ RG+ A+Y+HLTLMPY
Sbjct: 121 EIKDFVTEGNDDYDFVICEIGGTVGDIEAMPFMEAIRQLGNDLP-RGT-AIYVHLTLMPY 178
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
I ++GELKTKPTQHSVKELQALG+HPDILL+RADR+IPE ERRK+SLFCNV SAVI AL
Sbjct: 179 IPAAGELKTKPTQHSVKELQALGIHPDILLVRADREIPEAERRKLSLFCNVRPSAVIQAL 238
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKY 300
DV +IY VP++YH EG+DS VL AFGIE P+++ W+ C+R + + EV +AIVGKY
Sbjct: 239 DVANIYDVPIAYHNEGLDSEVLAAFGIEPAPKPRLEQWEEVCNRIRTPEGEVTIAIVGKY 298
Query: 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG 360
LKDAY+SLIEAL H G +N KV+L WI++E EKEDP + V+GILVPGGFG+RG
Sbjct: 299 TGLKDAYKSLIEALHHGGFANRVKVKLEWIESEVFEKEDPTPYLEKVNGILVPGGFGERG 358
Query: 361 SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSE 420
SEGKI A +FARE +P+ GICFGMQMAV+EAAR+LAGI NA STEF PV+ LM+E
Sbjct: 359 SEGKIMAAQFARERNVPYFGICFGMQMAVVEAARHLAGIENASSTEFGPTAEPVVGLMTE 418
Query: 421 WMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYRE 480
W+KG++ EKR DLG TMRLGAY +LK++T I+ IYG I ERHRHRYEVNV Y++
Sbjct: 419 WVKGNELEKRSTKGDLGGTMRLGAYKAALKKDTKIAEIYGSTDISERHRHRYEVNVDYKD 478
Query: 481 KLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLY 540
+LE CGL FSG S D LPE VEY +HPWFIGVQYHPELKSRPLDPHPLF SF++A V
Sbjct: 479 RLEECGLVFSGMSPDGVLPETVEYPDHPWFIGVQYHPELKSRPLDPHPLFASFVEAAVEQ 538
Query: 541 SQ 542
S+
Sbjct: 539 SR 540
|
Species: Agrobacterium sp. H13-3 Genus: Agrobacterium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|222086037|ref|YP_002544569.1| CTP synthase [Agrobacterium radiobacter K84] Length = 566 | Back alignment and organism information |
|---|
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/542 (70%), Positives = 443/542 (81%), Gaps = 2/542 (0%)
Query: 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVF 60
M +Y+FITGGVVSSLGKG+AAA+LGALLQA Y+VR+RKLDPYLN DPGTMSP QHGEVF
Sbjct: 25 MARYVFITGGVVSSLGKGIAAAALGALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVF 84
Query: 61 VTDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTN 120
VTDDG E DLD GHYERF G S K DNIT GRIYKN+ID+ERRGDYLG TVQVIPHVTN
Sbjct: 85 VTDDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTN 144
Query: 121 EIKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
EIK+F+ +GN++ DFVICEIGGT+GDIE MPF+EAIRQ GN+ RG+ A+Y+HLTLMPY
Sbjct: 145 EIKDFVIEGNDEYDFVICEIGGTVGDIEAMPFMEAIRQLGNDLP-RGT-AIYVHLTLMPY 202
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
I ++GELKTKPTQHSVKELQALG+HPDILL+RADR+IPE ERRK+SLFCNV SAVI AL
Sbjct: 203 IPAAGELKTKPTQHSVKELQALGIHPDILLVRADREIPEAERRKLSLFCNVRQSAVIQAL 262
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKY 300
DV +IY VP++YHREG+D+ VL AFGIE P++D W+ C+R + + EV +AIVGKY
Sbjct: 263 DVANIYDVPMAYHREGLDNEVLAAFGIEPAPKPRLDQWEEVCNRIRTPEGEVTIAIVGKY 322
Query: 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG 360
LKDAY+SLIEAL H G++N KV L WI++E EKEDP + VHGILVPGGFG+RG
Sbjct: 323 TGLKDAYKSLIEALHHGGIANRVKVNLEWIESEVFEKEDPAPYLEKVHGILVPGGFGERG 382
Query: 361 SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSE 420
SEGKI A +FARE K+P+ GICFGMQMAVIEAARNLAG+ +A STEF PV+ LM+E
Sbjct: 383 SEGKILAARFARERKVPYFGICFGMQMAVIEAARNLAGVEHASSTEFGPTNEPVVGLMTE 442
Query: 421 WMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYRE 480
W+KG++ +KR S DLG TMRLGAY SLK+ T IS IYG I ERHRHRYEVNV Y++
Sbjct: 443 WLKGNELQKRTKSGDLGGTMRLGAYKASLKKGTKISEIYGSTDISERHRHRYEVNVDYKD 502
Query: 481 KLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLY 540
+LE CGL FSG S D LPE VEY +HPWFIGVQYHPELKSRPL+PHPLF SFI+A
Sbjct: 503 RLEDCGLIFSGMSPDGILPETVEYPDHPWFIGVQYHPELKSRPLEPHPLFSSFIEAATEQ 562
Query: 541 SQ 542
S+
Sbjct: 563 SR 564
|
Species: Agrobacterium tumefaciens Genus: Agrobacterium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|150396290|ref|YP_001326757.1| CTP synthetase [Sinorhizobium medicae WSM419] Length = 542 | Back alignment and organism information |
|---|
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/542 (70%), Positives = 441/542 (81%), Gaps = 2/542 (0%)
Query: 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVF 60
M +Y+FITGGVVSSLGKG+AAA+LGALLQA Y+VR+RKLDPYLN DPGTMSP QHGEVF
Sbjct: 1 MARYVFITGGVVSSLGKGIAAAALGALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVF 60
Query: 61 VTDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTN 120
VTDDG E DLD GHYERF G S K DNIT GRIYKN+ID+ERRGDYLG TVQVIPHVTN
Sbjct: 61 VTDDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTN 120
Query: 121 EIKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
EIK F+T+GNED DFVICEIGGT+GDIE MPF+EAIRQ GN+ RG+ A+Y+HLTLMPY
Sbjct: 121 EIKNFVTEGNEDYDFVICEIGGTVGDIEAMPFMEAIRQLGNDLP-RGT-AVYVHLTLMPY 178
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
I ++GELKTKPTQHSVKELQALG+HPDILL+RADR+IPE ERRK+SLFCNV SAVI AL
Sbjct: 179 IPAAGELKTKPTQHSVKELQALGIHPDILLVRADREIPEAERRKLSLFCNVRQSAVIQAL 238
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKY 300
DV IY VP++YH+EG+D+ VL AFGIE P+++ W+ R + + EV +AIVGKY
Sbjct: 239 DVASIYDVPIAYHKEGLDNEVLAAFGIEPAPKPRMEAWEDVAHRIRTPEGEVTIAIVGKY 298
Query: 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG 360
LKDAY+SLIEAL H G++N KV+L WI++E EKEDP + VHGILVPGGFG+RG
Sbjct: 299 TGLKDAYKSLIEALYHGGIANRVKVKLEWIESEVFEKEDPAPYLEKVHGILVPGGFGERG 358
Query: 361 SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSE 420
SEGKI A +FARE K+P+ GICFGMQMAV+EAARNLAGI A STEF PV+ LM+E
Sbjct: 359 SEGKINAARFARERKVPYFGICFGMQMAVVEAARNLAGIEKASSTEFGPTKEPVVGLMTE 418
Query: 421 WMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYRE 480
W+KG++ EKR + DLG TMRLGAY +LK ET I+ IYG I ERHRHRYEVNV Y++
Sbjct: 419 WVKGNELEKRSAAGDLGGTMRLGAYRAALKPETKIAGIYGSPDISERHRHRYEVNVDYKD 478
Query: 481 KLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLY 540
+LE CGL FSG S D LPE VEY +HPWFIGVQYHPELKSRPLDPHPLF SFI+A +
Sbjct: 479 RLESCGLVFSGMSPDGVLPETVEYPDHPWFIGVQYHPELKSRPLDPHPLFASFIEAALEQ 538
Query: 541 SQ 542
S+
Sbjct: 539 SR 540
|
Species: Sinorhizobium medicae Genus: Sinorhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|222148651|ref|YP_002549608.1| CTP synthetase [Agrobacterium vitis S4] Length = 555 | Back alignment and organism information |
|---|
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/542 (69%), Positives = 444/542 (81%), Gaps = 2/542 (0%)
Query: 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVF 60
M +Y+FITGGVVSSLGKG+AAA+LGALLQA Y+VR+RKLDPYLN DPGTMSP QHGEVF
Sbjct: 14 MARYVFITGGVVSSLGKGIAAAALGALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVF 73
Query: 61 VTDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTN 120
VTDDG E DLD GHYERF G S K DNIT GRIYKN+ID+ERRGDYLG TVQVIPHVTN
Sbjct: 74 VTDDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTN 133
Query: 121 EIKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
EIK+FI +GN D DFVICEIGGT+GDIE MPFVEAIRQ GNE RG+ A+Y+HLTLMPY
Sbjct: 134 EIKDFIVEGNSDYDFVICEIGGTVGDIEAMPFVEAIRQLGNELP-RGN-AIYVHLTLMPY 191
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
I ++GELKTKPTQHSVKELQALG+HPDILL+RADR+IPE ERRK+SLFCNV SAVI AL
Sbjct: 192 IPAAGELKTKPTQHSVKELQALGIHPDILLVRADREIPEPERRKLSLFCNVRPSAVIQAL 251
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKY 300
DV +IY VP++YH+EG+D+ VL AFGIE P++D W+ +R + + EV +AIVGKY
Sbjct: 252 DVANIYDVPMAYHKEGLDNEVLAAFGIEPAPKPRLDAWEEVSNRIRTPEGEVTIAIVGKY 311
Query: 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG 360
LKDAY+SLIEAL H G++N KV+L WI++E EKEDP + VHGILVPGGFG+RG
Sbjct: 312 TGLKDAYKSLIEALHHGGIANRVKVKLEWIESEVFEKEDPAPYLEKVHGILVPGGFGERG 371
Query: 361 SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSE 420
SEGKI A +FARE K+P+ GICFGMQMAV+EAAR+LAGI A STEF + PV+ LM+E
Sbjct: 372 SEGKILAAQFARERKVPYFGICFGMQMAVVEAARHLAGIEQASSTEFGQTSEPVVGLMTE 431
Query: 421 WMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYRE 480
WMKG++ EKR + +LG TMRLGAY +LK+++ I+ IYG I ERHRHRYEVNV Y++
Sbjct: 432 WMKGNELEKRSAAGNLGGTMRLGAYKAALKKDSRIADIYGSTEISERHRHRYEVNVDYKQ 491
Query: 481 KLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLY 540
+LE CGL F+G S D LPE VEY +HPWF+GVQYHPELKSRPLDPHPLF SF++A +
Sbjct: 492 RLEDCGLVFAGMSPDGLLPETVEYPDHPWFVGVQYHPELKSRPLDPHPLFKSFVEAALEQ 551
Query: 541 SQ 542
S+
Sbjct: 552 SR 553
|
Species: Agrobacterium vitis Genus: Agrobacterium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|209549426|ref|YP_002281343.1| CTP synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 542 | Back alignment and organism information |
|---|
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/542 (69%), Positives = 441/542 (81%), Gaps = 2/542 (0%)
Query: 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVF 60
M +Y+FITGGVVSSLGKG+AAA+LGALLQA Y+VR+RKLDPYLN DPGTMSP QHGEVF
Sbjct: 1 MARYVFITGGVVSSLGKGIAAAALGALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVF 60
Query: 61 VTDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTN 120
VTDDG E DLD GHYERF G S K DNIT GRIYKN+ID+ERRGDYLG TVQVIPHVTN
Sbjct: 61 VTDDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTN 120
Query: 121 EIKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
EIK+F+ +GN+D DFVICEIGGT+GDIE MPF+EAIRQ GN+ RG+ A+Y+HLTLMPY
Sbjct: 121 EIKDFVIEGNDDYDFVICEIGGTVGDIEAMPFMEAIRQLGNDLP-RGT-AVYVHLTLMPY 178
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
I ++GELKTKPTQHSVKELQALG+HPDILL+RADR+IPE ERRK+SLFCNV SAVI AL
Sbjct: 179 IPAAGELKTKPTQHSVKELQALGIHPDILLVRADREIPEAERRKLSLFCNVRPSAVIQAL 238
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKY 300
DV +IY VP++YH+EG+D VL AFGIE P++D W+ C+R + + EV +AIVGKY
Sbjct: 239 DVANIYDVPIAYHKEGLDDEVLAAFGIEPAPKPRLDPWEEVCNRIRTPEGEVTIAIVGKY 298
Query: 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG 360
LKDAY+SLIEAL H G++N KV+L WI++E EKEDP + VHGILVPGGFG+RG
Sbjct: 299 TGLKDAYKSLIEALHHGGIANRVKVKLEWIESEVFEKEDPAPYLEKVHGILVPGGFGERG 358
Query: 361 SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSE 420
SEGKI A +FARE K+P+ GICFGMQMAVIEAARNLA + A STEF PV+ LM+E
Sbjct: 359 SEGKIHAARFARERKVPYFGICFGMQMAVIEAARNLADVSGASSTEFGPTKEPVVGLMTE 418
Query: 421 WMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYRE 480
W+KG++ +KR + DLG TMRLGAY +LK+ T IS IYG I ERHRHRYEVNV Y++
Sbjct: 419 WVKGNELQKRTAAGDLGGTMRLGAYKAALKKGTKISDIYGSTDISERHRHRYEVNVDYKD 478
Query: 481 KLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLY 540
+LE CGL FSG S D LPE +EY +HPWFIGVQYHPELKSRPLDPHPLF SFI+A
Sbjct: 479 RLESCGLVFSGMSPDGVLPETIEYPDHPWFIGVQYHPELKSRPLDPHPLFASFIEAATEQ 538
Query: 541 SQ 542
S+
Sbjct: 539 SR 540
|
Species: Rhizobium leguminosarum Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
| Identity | Alignment graph | Length | Definition | E-value |
| Target | 544 | CTP synthetase [Candidatus Liberibacter asiaticus str. | ||
| PRK05380 | 533 | PRK05380, pyrG, CTP synthetase; Validated | 0.0 | |
| TIGR00337 | 525 | TIGR00337, PyrG, CTP synthase | 0.0 | |
| PLN02327 | 557 | PLN02327, PLN02327, CTP synthase | 1e-166 | |
| KOG2387 | 585 | KOG2387, KOG2387, KOG2387, CTP synthase (UTP-ammonia ly | 1e-163 | |
| COG0504 | 533 | COG0504, PyrG, CTP synthase (UTP-ammonia lyase) [Nucleo | 0.0 | |
| pfam06418 | 275 | pfam06418, CTP_synth_N, CTP synthase N-terminus | 1e-136 | |
| cd03113 | 255 | cd03113, CTGs, CTP synthetase (CTPs) is a two-domain pr | 1e-116 | |
| cd01746 | 235 | cd01746, GATase1_CTP_Synthase, Type 1 glutamine amidotr | 1e-100 | |
| pfam00117 | 187 | pfam00117, GATase, Glutamine amidotransferase class-I | 2e-29 | |
| PRK06186 | 229 | PRK06186, PRK06186, hypothetical protein; Validated | 3e-29 | |
| cd01653 | 115 | cd01653, GATase1, Type 1 glutamine amidotransferase (GA | 3e-09 | |
| cd03128 | 92 | cd03128, GAT_1, Type 1 glutamine amidotransferase (GATa | 6e-08 | |
| COG2071 | 243 | COG2071, COG2071, Predicted glutamine amidotransferases | 2e-08 | |
| PRK11366 | 254 | PRK11366, puuD, gamma-glutamyl-gamma-aminobutyrate hydr | 1e-04 | |
| pfam07722 | 219 | pfam07722, Peptidase_C26, Peptidase C26 | 3e-04 |
| >gnl|CDD|180047 PRK05380, pyrG, CTP synthetase; Validated | Back alignment and domain information |
|---|
Score = 977 bits (2529), Expect = 0.0
Identities = 322/544 (59%), Positives = 398/544 (73%), Gaps = 13/544 (2%)
Query: 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVF 60
M KYIF+TGGVVSSLGKG+ AASLG LL+A KV ++KLDPY+N DPGTMSP QHGEVF
Sbjct: 1 MTKYIFVTGGVVSSLGKGITAASLGRLLKARGLKVTIQKLDPYINVDPGTMSPYQHGEVF 60
Query: 61 VTDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTN 120
VTDDG E DLD GHYERF+ + K +N+T G+IY +VI++ERRGDYLG TVQVIPH+T+
Sbjct: 61 VTDDGAETDLDLGHYERFIDTNLTKYNNVTTGKIYSSVIEKERRGDYLGKTVQVIPHITD 120
Query: 121 EIKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
EIKE I DAD VI EIGGT+GDIE +PF+EAIRQ E L+IHLTL+PY
Sbjct: 121 EIKERILAAGTDADVVIVEIGGTVGDIESLPFLEAIRQLRLELGRE--NVLFIHLTLVPY 178
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
I ++GELKTKPTQHSVKEL+++G+ PDIL+ R++R +PE E+RKI+LFCNVP AVI A
Sbjct: 179 IAAAGELKTKPTQHSVKELRSIGIQPDILVCRSERPLPEEEKRKIALFCNVPEEAVISAP 238
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKY 300
DVD IY+VPL H +G+D +VL G+E P + W+ +R + K EV +A+VGKY
Sbjct: 239 DVDSIYEVPLLLHEQGLDDIVLERLGLEAPE-PDLSEWEELVERLKNPKGEVTIALVGKY 297
Query: 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG 360
+ L DAY+S+IEAL+H+G++N KV + WID+E LE+E+ + GV GILVPGGFG+RG
Sbjct: 298 VELPDAYKSVIEALKHAGIANDVKVNIKWIDSEDLEEENVAELLKGVDGILVPGGFGERG 357
Query: 361 SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEF-SEAGVPVIALMS 419
EGKI AI++AREN IPFLGIC GMQ+AVIE ARN+ G+ +A STEF + PVI LM
Sbjct: 358 IEGKILAIRYARENNIPFLGICLGMQLAVIEFARNVLGLEDANSTEFDPDTPHPVIDLMP 417
Query: 420 EWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYR 479
E DLG TMRLGAY LK TL + IYG + I ERHRHRYEVN +YR
Sbjct: 418 EQKDV---------SDLGGTMRLGAYPCKLKPGTLAAEIYGKEEIYERHRHRYEVNNKYR 468
Query: 480 EKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVL 539
E+LE GL FSG S D L E+VE +HPWF+GVQ+HPE KSRP PHPLF F++A +
Sbjct: 469 EQLEKAGLVFSGTSPDGRLVEIVELPDHPWFVGVQFHPEFKSRPRRPHPLFAGFVKAALE 528
Query: 540 YSQS 543
+
Sbjct: 529 NKKR 532
|
Length = 533 |
| >gnl|CDD|161825 TIGR00337, PyrG, CTP synthase | Back alignment and domain information |
|---|
Score = 735 bits (1900), Expect = 0.0
Identities = 290/537 (54%), Positives = 373/537 (69%), Gaps = 16/537 (2%)
Query: 3 KYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVT 62
KYIF+TGGVVSSLGKG+ AAS+G LL+A KV + K+DPY+N DPGTMSP+QHGEVFVT
Sbjct: 2 KYIFVTGGVVSSLGKGITAASIGRLLKARGLKVTIIKIDPYINIDPGTMSPLQHGEVFVT 61
Query: 63 DDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEI 122
DDG E DLD GHYERF+ + + +NIT G+IY +VI++ER+GDYLG TVQ+IPH+TNEI
Sbjct: 62 DDGAETDLDLGHYERFLDTNLTRDNNITTGKIYSSVIEKERKGDYLGKTVQIIPHITNEI 121
Query: 123 KEFITQG--NEDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
K+ I + D VI EIGGT+GDIE +PF+EAIRQF NE +IH+TL+PY
Sbjct: 122 KDRIKRVAKISGPDVVIVEIGGTVGDIESLPFLEAIRQFRNEVGR--ENVAFIHVTLVPY 179
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
I ++GE KTKPTQHSVKEL++LG+ PDI++ R+ + + KI+LFC+V AVI A
Sbjct: 180 IAAAGEQKTKPTQHSVKELRSLGIQPDIIICRSSEPLDPSTKDKIALFCDVEEEAVINAH 239
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKY 300
DV IY+VPL ++G+D + + + W+ ++ ++ K+EV + IVGKY
Sbjct: 240 DVSSIYEVPLLLLKQGLDDYLCRRLNLNCDE-ADLSEWEELVEKFINPKHEVTIGIVGKY 298
Query: 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG 360
+ LKD+Y S+IEAL+H+G TKV + WID+E LE+E + GV GILVPGGFG+RG
Sbjct: 299 VELKDSYLSVIEALKHAGAKLDTKVNIKWIDSEDLEEEG-AEFLKGVDGILVPGGFGERG 357
Query: 361 SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEF-SEAGVPVIALMS 419
EGKI AIK+AREN IPFLGIC GMQ+AVIE ARN+ G+ A STEF E PV+ L+
Sbjct: 358 VEGKILAIKYARENNIPFLGICLGMQLAVIEFARNVLGLKGANSTEFDPETKYPVVDLLP 417
Query: 420 EWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYR 479
E DLG TMRLG Y LK TL ++YG + + ERHRHRYEVN YR
Sbjct: 418 EQKD---------ISDLGGTMRLGLYPCILKPGTLAFKLYGKEEVYERHRHRYEVNNEYR 468
Query: 480 EKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQA 536
E+LE GL SG S D L E++E +HP+F+ Q+HPE SRP PHPLF+ F++A
Sbjct: 469 EQLENKGLIVSGTSPDGRLVEIIELPDHPFFVACQFHPEFTSRPNRPHPLFLGFVKA 525
|
CTP synthase is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. The enzyme catalyzes the reaction L-glutamine + H2O + UTP + ATP = CTP + phosphate + ADP + L-glutamate. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. This gene has been found circa 500 bp 5' upstream of enolase in both beta (Nitrosomonas europaea) and gamma (E.coli) subdivisions of proteobacterium (FEMS Microbiol Lett 1998 Aug 1;165(1):153-7). Length = 525 |
| >gnl|CDD|177961 PLN02327, PLN02327, CTP synthase | Back alignment and domain information |
|---|
Score = 581 bits (1501), Expect = e-166
Identities = 255/556 (45%), Positives = 348/556 (62%), Gaps = 34/556 (6%)
Query: 3 KYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVT 62
KY+ +TGGVVS LGKGV A+S+G LL+A +V K+DPYLN+D GTMSP +HGEVFV
Sbjct: 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVL 61
Query: 63 DDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEI 122
DDGGE DLD G+YERF+ ++ + +NIT G+IY++VI++ERRGDYLG TVQV+PH+T+ I
Sbjct: 62 DDGGEVDLDLGNYERFLDVTLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAI 121
Query: 123 KEFITQ-------GNED-ADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIH 174
+E+I + G E AD + E+GGT+GDIE MPF+EA+RQF F IH
Sbjct: 122 QEWIERVAKIPVDGKEGPADVCVIELGGTVGDIESMPFIEALRQF--SFRVGPGNFCLIH 179
Query: 175 LTLMPYIRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMS 234
++L+P + GE KTKPTQHSV+ L+ALG+ P IL R+ + + E + K+S FC+VP
Sbjct: 180 VSLVPVLGVVGEQKTKPTQHSVRGLRALGLTPHILACRSTKPLEENVKEKLSQFCHVPAE 239
Query: 235 AVIPALDVDDIYKVPLSYHREGIDSVVLNAFGIENVSL-PQIDNWQTFCDRTLSLKNEVK 293
++ DV +I+ VPL + +L + +V+ P ++ W + +L V+
Sbjct: 240 NILNLHDVSNIWHVPLLLRDQKAHEAILKVLNLLSVAREPDLEEWTARAESCDNLTEPVR 299
Query: 294 VAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLE----KEDPVKH------ 343
+A+VGKY L D+Y S+++AL H+ V+ K+ + W+ A LE KE P +
Sbjct: 300 IAMVGKYTGLSDSYLSVLKALLHASVACSRKLVIDWVAASDLEDETAKETPDAYAAAWKL 359
Query: 344 FYGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNAC 403
G GILVPGGFG RG EGKI A K+ARENK+P+LGIC GMQ+AVIE AR++ G+ +A
Sbjct: 360 LKGADGILVPGGFGDRGVEGKILAAKYARENKVPYLGICLGMQIAVIEFARSVLGLKDAN 419
Query: 404 STEFSEAGV-PVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLIS-RIYG- 460
STEF P + M E K +G TMRLG+ + S ++YG
Sbjct: 420 STEFDPETPNPCVIFMPEGSK----------THMGGTMRLGSRRTYFQTPDCKSAKLYGN 469
Query: 461 LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELK 520
+ + ERHRHRYEVN +LE GL F G E+VE +HP+F+GVQ+HPE K
Sbjct: 470 VSFVDERHRHRYEVNPEMVPRLEKAGLSFVGKDETGRRMEIVELPSHPFFVGVQFHPEFK 529
Query: 521 SRPLDPHPLFVSFIQA 536
SRP P PLF+ I A
Sbjct: 530 SRPGKPSPLFLGLIAA 545
|
Length = 557 |
| >gnl|CDD|37598 KOG2387, KOG2387, KOG2387, CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Score = 569 bits (1468), Expect = e-163
Identities = 256/560 (45%), Positives = 360/560 (64%), Gaps = 35/560 (6%)
Query: 2 VKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFV 61
+KY+ +TGGV+S +GKG+ A+S+G LL++ +V K+DPYLN D GTMSP +HGEVFV
Sbjct: 1 MKYVLVTGGVISGIGKGIIASSIGVLLKSCGLRVTSIKIDPYLNIDAGTMSPYEHGEVFV 60
Query: 62 TDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNE 121
DDGGE DLD G+YERF+ I+ + +NIT G+IY++VI++ERRGDYLG TVQV+PH+T+
Sbjct: 61 LDDGGEVDLDLGNYERFLDITLTRDNNITTGKIYQHVIEKERRGDYLGKTVQVVPHITDA 120
Query: 122 IKEFI-------TQGNED-ADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYI 173
I+++I G D + E+GGT+GDIE MPFVEA+RQF +F I
Sbjct: 121 IQDWIERVARIPVDGTGGEPDVCVIELGGTVGDIESMPFVEALRQF--QFKVGRENFCLI 178
Query: 174 HLTLMPYIRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPM 233
H++L+P + +GE KTKPTQHSV++L+ LG+ PD++ R+ + + + KIS+FC+V
Sbjct: 179 HVSLVPVLSVTGEQKTKPTQHSVRDLRGLGLSPDLIACRSTKPLEMSVKEKISMFCHVGP 238
Query: 234 SAVIPALDVDDIYKVPLSYHREGIDSVVLNAFGIENVSL--PQIDNWQTFCDRTLSLKNE 291
V+ DV IY VPL +GI + G+ +S P +D W +R L+
Sbjct: 239 EQVVGLHDVSSIYHVPLLLEEQGIVEYLNRRLGLSIISSERPMLDKWSNMAERYDDLQVP 298
Query: 292 VKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLE----KEDPVKH---- 343
V++A+VGKY L D+Y S+++AL H+ ++ K+++ WID+ LE +EDP K+
Sbjct: 299 VRIALVGKYTKLSDSYLSVVKALEHAALAINRKLEIVWIDSSDLEPETEQEDPRKYHAAW 358
Query: 344 --FYGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPN 401
GILVPGGFG RG EGKI A K+ARENKIPFLGIC GMQ+AVIE ARN+ G+ +
Sbjct: 359 QKLKSADGILVPGGFGDRGVEGKILAAKWARENKIPFLGICLGMQLAVIEFARNVLGLKD 418
Query: 402 ACSTEF-SEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLK-EETLISRIY 459
A STEF E PV+ M E K +G TMRLG+ + +++ + ++Y
Sbjct: 419 ANSTEFDPETKNPVVIFMPEHNKT----------HMGGTMRLGSRRTVFQDKDSKLRKLY 468
Query: 460 G-LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPE 518
G ++ + ERHRHRYEVN ++LE GL F G V E++E +HP+F+GVQ+HPE
Sbjct: 469 GNVEFVDERHRHRYEVNPEMVKQLEQAGLSFVGKDVTGKRMEIIELESHPFFVGVQFHPE 528
Query: 519 LKSRPLDPHPLFVSFIQATV 538
KSRP P PLF+ + A+
Sbjct: 529 FKSRPDKPSPLFLGLVAASC 548
|
Length = 585 |
| >gnl|CDD|30850 COG0504, PyrG, CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Score = 801 bits (2071), Expect = 0.0
Identities = 313/543 (57%), Positives = 393/543 (72%), Gaps = 14/543 (2%)
Query: 3 KYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVT 62
KYIF+TGGVVSSLGKG+ AASLG LL+A KV ++KLDPYLN DPGTMSP QHGEVFVT
Sbjct: 2 KYIFVTGGVVSSLGKGITAASLGRLLKARGLKVTIQKLDPYLNVDPGTMSPYQHGEVFVT 61
Query: 63 DDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEI 122
DDG E DLD GHYERF+ ++ +K +NIT G+IY VI++ERRGDYLG TVQVIPH+T+EI
Sbjct: 62 DDGAETDLDLGHYERFLDVNLSKDNNITTGKIYSEVIEKERRGDYLGKTVQVIPHITDEI 121
Query: 123 KEFITQGNE-DADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPYI 181
K+ I + + AD VI EIGGT+GDIE +PF+EAIRQ E L+IH+TL+PYI
Sbjct: 122 KDRIREAADSTADVVIVEIGGTVGDIESLPFLEAIRQLRLELGR--ENVLFIHVTLVPYI 179
Query: 182 RSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPALD 241
++GELKTKPTQHSVKEL+++G+ PDIL+ R++R +PE ERRKI+LFCNVP AVI A D
Sbjct: 180 AAAGELKTKPTQHSVKELRSIGIQPDILICRSERPLPEEERRKIALFCNVPEEAVISAPD 239
Query: 242 VDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKYI 301
V+ IY+VPL ++G+D +L + P + W+ D+ + K EV +A+VGKY+
Sbjct: 240 VESIYEVPLLLEKQGLDDYILERLNLNAPE-PDLSEWKDLVDKIKNPKKEVTIALVGKYV 298
Query: 302 HLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGS 361
L DAY+S+IEAL+H+G++ KV + WID+E LE+E+ + V GILVPGGFG RG
Sbjct: 299 ELPDAYKSVIEALKHAGIALGVKVNIKWIDSEDLEEENAAELEKLVDGILVPGGFGYRGV 358
Query: 362 EGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGV-PVIALMSE 420
EGKIAAI++AREN IPFLGIC GMQ+AVIE ARN+ G+ A STEF PV+ LM E
Sbjct: 359 EGKIAAIRYARENNIPFLGICLGMQLAVIEFARNVLGLEGANSTEFDPDTKYPVVDLMPE 418
Query: 421 WMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYRE 480
DLG TMRLGAY LK TL +++YG D I ERHRHRYEVN YR+
Sbjct: 419 QKDV---------VDLGGTMRLGAYPCRLKPGTLAAKLYGKDEIYERHRHRYEVNNDYRD 469
Query: 481 KLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLY 540
+LE GL FSG S D L E+VE +HP+F+ Q+HPE KSRPL PHPLFV F++A + Y
Sbjct: 470 QLEKAGLVFSGTSPDGGLVEIVELPDHPFFVATQFHPEFKSRPLRPHPLFVGFVKAALEY 529
Query: 541 SQS 543
+
Sbjct: 530 KKD 532
|
Length = 533 |
| >gnl|CDD|148179 pfam06418, CTP_synth_N, CTP synthase N-terminus | Back alignment and domain information |
|---|
Score = 479 bits (1236), Expect = e-136
Identities = 165/278 (59%), Positives = 214/278 (76%), Gaps = 4/278 (1%)
Query: 2 VKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFV 61
KYIF+TGGVVSSLGKG+ AASLG LL++ KV ++K+DPYLN DPGTMSP QHGEVFV
Sbjct: 1 TKYIFVTGGVVSSLGKGITAASLGRLLKSRGLKVTIQKIDPYLNVDPGTMSPYQHGEVFV 60
Query: 62 TDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNE 121
TDDG E DLD GHYERF+ I+ K +NIT G+IY +VI++ERRGDYLG TVQVIPH+T+E
Sbjct: 61 TDDGAETDLDLGHYERFLDINLTKDNNITTGKIYSSVIEKERRGDYLGKTVQVIPHITDE 120
Query: 122 IKEFITQ-GNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
IKE I + + AD VI EIGGT+GDIE +PF+EAIRQF E L+IH+TL+PY
Sbjct: 121 IKERIRRVAAKGADVVIVEIGGTVGDIESLPFLEAIRQFRLEVGR--ENVLFIHVTLVPY 178
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
++++GELKTKPTQHSVKEL+++G+ PDIL+ R+++ + E + KI+LFCNVP AVI A
Sbjct: 179 LKAAGELKTKPTQHSVKELRSIGIQPDILVCRSEKPLDEETKEKIALFCNVPKEAVISAP 238
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNW 278
DV+ IY+VPL ++G+D ++L G++ P + W
Sbjct: 239 DVESIYEVPLLLEKQGLDELILEKLGLDPKE-PDLSKW 275
|
This family consists of the N-terminal region of the CTP synthase protein (EC:6.3.4.2). This family is found in conjunction with pfam00117 located in the C-terminal region of the protein. CTP synthase catalyses the synthesis of CTP from UTP by amination of the pyrimidine ring at the 4-position. Length = 275 |
| >gnl|CDD|48377 cd03113, CTGs, CTP synthetase (CTPs) is a two-domain protein, which consists of an N-terminal synthetase domain and C-terminal glutaminase domain | Back alignment and domain information |
|---|
Score = 413 bits (1064), Expect = e-116
Identities = 161/257 (62%), Positives = 203/257 (78%), Gaps = 4/257 (1%)
Query: 3 KYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVT 62
KYIF+TGGVVSSLGKG+ AASLG LL+A KV +KLDPYLN DPGTMSP QHGEVFVT
Sbjct: 1 KYIFVTGGVVSSLGKGITAASLGRLLKARGLKVTAQKLDPYLNVDPGTMSPYQHGEVFVT 60
Query: 63 DDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEI 122
DDG E DLD GHYERF+ + ++ +NIT G+IY +VI++ERRGDYLG TVQVIPH+T+EI
Sbjct: 61 DDGAETDLDLGHYERFLDTNLSRDNNITTGKIYSSVIEKERRGDYLGKTVQVIPHITDEI 120
Query: 123 KEFITQGNE--DADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
KE I + E AD VI EIGGT+GDIE +PF+EAIRQ E L+IH+TL+PY
Sbjct: 121 KERIRRVAEKSGADVVIVEIGGTVGDIESLPFLEAIRQMKLELG--RENVLFIHVTLVPY 178
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
++++GELKTKPTQHSVKEL+++G+ PDIL+ R+++ +P R KI+LFC+VP AVI A
Sbjct: 179 LKAAGELKTKPTQHSVKELRSIGIQPDILVCRSEKPLPPEIREKIALFCDVPPEAVISAP 238
Query: 241 DVDDIYKVPLSYHREGI 257
DVD+IY+VPL ++G+
Sbjct: 239 DVDNIYEVPLLLEQQGL 255
|
The enzymes hydrolyze the amide bond of glutamine to ammonia and glutamate at the glutaminase domains and transfer nascent ammonia to the acceptor substrate at the synthetase domain to form an aminated product. Glutaminase domains have evolved from the same ancestor, whereas the synthetase domains are evolutionarily unrelated and have different functions. This protein family is classified based on the N-terminal synthetase domain.. Length = 255 |
| >gnl|CDD|153217 cd01746, GATase1_CTP_Synthase, Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase | Back alignment and domain information |
|---|
Score = 360 bits (926), Expect = e-100
Identities = 138/244 (56%), Positives = 174/244 (71%), Gaps = 10/244 (4%)
Query: 292 VKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGIL 351
V++A+VGKY+ L DAY S++EAL+H+G++ K+++ WID+E LE+E+ + G GIL
Sbjct: 1 VRIALVGKYVELPDAYLSVLEALKHAGIALGVKLEIKWIDSEDLEEENAEEALKGADGIL 60
Query: 352 VPGGFGKRGSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEF-SEA 410
VPGGFG RG EGKI AIK+AREN IPFLGIC GMQ+AVIE ARN+ G+P+A STEF +
Sbjct: 61 VPGGFGIRGVEGKILAIKYARENNIPFLGICLGMQLAVIEFARNVLGLPDANSTEFDPDT 120
Query: 411 GVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRH 470
PV+ LM E Q+ DLG TMRLGAY V LK TL + YG D + ERHRH
Sbjct: 121 PHPVVDLMPE-----QKGV----KDLGGTMRLGAYPVILKPGTLAHKYYGKDEVEERHRH 171
Query: 471 RYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLF 530
RYEVN Y ++LE GL+FSG D L E+VE +HP+F+G Q+HPE KSRPL PHPLF
Sbjct: 172 RYEVNPEYVDELEEAGLRFSGTDPDGGLVEIVELPDHPFFVGTQFHPEFKSRPLKPHPLF 231
Query: 531 VSFI 534
V F+
Sbjct: 232 VGFV 235
|
Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase (CTP). CTP is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. CTPs produce CTP from UTP and glutamine and regulate intracellular CTP levels through interactions with four ribonucleotide triphosphates. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. CTP is derived form UTP in three separate steps involving two active sites. In one active site, the UTP O4 oxygen is activated by Mg-ATP-dependent phosphorylation, followed by displacement of the resulting 4-phosphate moiety by ammonia. At a separate site, ammonia is generated via rate limiting glutamine hydrolysis (glutaminase) activity. A gated channel that spans between the glutamine hydrolysis and amidoligase active sites provides a path for ammonia diffusion. CTPs belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. Length = 235 |
| >gnl|CDD|143892 pfam00117, GATase, Glutamine amidotransferase class-I | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 2e-29
Identities = 55/237 (23%), Positives = 77/237 (32%), Gaps = 52/237 (21%)
Query: 302 HLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGS 361
L D S L + +V++ D E + GI++ G G G
Sbjct: 1 LLIDNGDSFTYNLARALRELGVEVEVVPNDTPAEE----ILELLNPDGIIISPGPGSPGD 56
Query: 362 -EGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSE 420
G I AIK RENKIP LGIC G Q+ + VI
Sbjct: 57 AGGAIEAIKELRENKIPILGICLGHQLLALAFGG------------------KVI----- 93
Query: 421 WMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGL-DLIPERHRHRYEVNVRYR 479
+ G +G YGL ++ R H Y V+
Sbjct: 94 ---------KAKEPHHGKNSPVGHDK---------GLFYGLPNVFIVRRYHSYAVD---- 131
Query: 480 EKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQA 536
GL+ + S + + + +P GVQ+HPE P P LF I+
Sbjct: 132 PDTLPDGLEVTAASDNGGEIMAIRHKENP-IFGVQFHPESSLTPGGPELLFNFLIKL 187
|
Length = 187 |
| >gnl|CDD|180452 PRK06186, PRK06186, hypothetical protein; Validated | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 3e-29
Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 25/247 (10%)
Query: 292 VKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGI- 350
+++A+VG Y A++++ AL + V W+ + + + F GI
Sbjct: 2 LRIALVGDYNPDVTAHQAIPLALDLAAAVLGLPVDYEWLPTPEITDPEDLAGF---DGIW 58
Query: 351 LVPGGFGKRGSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEF-SE 409
VPG R +G + AI+FAREN IPFLG C G Q A++E ARN+ G +A E E
Sbjct: 59 CVPGS-PYRNDDGALTAIRFARENGIPFLGTCGGFQHALLEYARNVLGWADAAHAETDPE 117
Query: 410 AGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHR 469
PVIA +S + D+ L+ +LI+R YG I E +
Sbjct: 118 GDRPVIAPLSCSLVEKTG------------------DIRLRPGSLIARAYGTLEIEEGYH 159
Query: 470 HRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPL 529
RY VN + LE L+ +G+ D VE HP+F+ + PE + P PL
Sbjct: 160 CRYGVNPEFVAALESGDLRVTGWDEDGD-VRAVELPGHPFFVATLFQPERAALAGRPPPL 218
Query: 530 FVSFIQA 536
+F++A
Sbjct: 219 VRAFLRA 225
|
Length = 229 |
| >gnl|CDD|153210 cd01653, GATase1, Type 1 glutamine amidotransferase (GATase1)-like domain | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 3e-09
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Query: 294 VAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVP 353
VA++ + S ++ALR +G +V + D +E + + + G+++P
Sbjct: 1 VAVLLFPGFEELELASPLDALREAGA----EVDVVSPDGGPVESDVDLDDY---DGLILP 53
Query: 354 GGFG----KRGSEGKIAAIKFARENKIPFLGICFGMQMAVI 390
GG G E +A ++ A P LGIC G Q+ V+
Sbjct: 54 GGPGTPDDLARDEALLALLREAAAAGKPILGICLGAQLLVL 94
|
Type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA. and, the A4 beta-galactosidase middle domain. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. For Pyrococcus horikoshii PH1704, the Cys of the nucleophile elbow together with a different His and, a Glu from an adjacent monomer form a catalytic triad different from the typical GATase1 triad. The E. coli HP-II C-terminal domain, S. meliloti Rm1021 ThuA and the A4 beta-galactosidase middle domain lack the catalytic triad typical GATaseI domains. GATase1-like domains can occur either as single polypeptides, as in Class I glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase. Length = 115 |
| >gnl|CDD|153222 cd03128, GAT_1, Type 1 glutamine amidotransferase (GATase1)-like domain | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 6e-08
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 294 VAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVP 353
VA++ + S ++ALR +G +V + D +E + + + G+++P
Sbjct: 1 VAVLLFGGSEELELASPLDALREAGA----EVDVVSPDGGPVESDVDLDDY---DGLILP 53
Query: 354 GGFG----KRGSEGKIAAIKFARENKIPFLGICFGMQM 387
GG G E +A ++ A P LGIC G Q+
Sbjct: 54 GGPGTPDDLAWDEALLALLREAAAAGKPVLGICLGAQL 91
|
Type 1 glutamine amidotransferase (GATase1)-like domain. This group contains proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA, the A4 beta-galactosidase middle domain and peptidase E. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase (CPSase), cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. For Pyrococcus horikoshii PH1704, the Cys of the nucleophile elbow together with a different His and, a Glu from an adjacent monomer form a catalytic triad different from the typical GATase1 triad. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad of typical GATase1 domains, by having a Ser in place of the reactive Cys at the nucleophile elbow. The E. coli HP-II C-terminal domain, S. meliloti Rm1021 ThuA and the A4 beta-galactosidase middle domain lack the catalytic triad typical GATaseI domains. GATase1-like domains can occur either as single polypeptides, as in Class I glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase. Peptidase E has a circular permutation in the common core of a typical GTAse1 domain. Length = 92 |
| >gnl|CDD|32254 COG2071, COG2071, Predicted glutamine amidotransferases [General function prediction only] | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 2e-08
Identities = 44/215 (20%), Positives = 74/215 (34%), Gaps = 51/215 (23%)
Query: 347 VHGILVPGG-------FGKRGSEGK-----------IAAIKFARENKIPFLGICFGMQMA 388
+ G+++ GG +G+ SE +A I+ A E IP LGIC G+Q+
Sbjct: 61 IDGLILTGGSNVDPSLYGEEPSEKDGPYDPERDAFELALIRAALERGIPILGICRGLQLL 120
Query: 389 VIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVS 448
+ L + SE + + V
Sbjct: 121 NVALGGTLY-------QDISE----QPGHIDHRQPNPVHIESHE--------------VH 155
Query: 449 LKEETLISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHP 508
++ + +++I G H + +KL GL + D E VE N
Sbjct: 156 IEPGSKLAKILGESEFMVNSFHHQAI-----KKL-APGLVVEARAPD-GTVEAVEVKNDA 208
Query: 509 WFIGVQYHPELKSRPLDP-HPLFVSFIQATVLYSQ 542
+ +GVQ+HPE LF +F+ A ++
Sbjct: 209 FVLGVQWHPEYLVDTNPLSLALFEAFVNACKKHAA 243
|
Length = 243 |
| >gnl|CDD|183101 PRK11366, puuD, gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 1e-04
Identities = 59/212 (27%), Positives = 86/212 (40%), Gaps = 56/212 (26%)
Query: 349 GILVPGG--------FGKRGSE-----GK----IAAIKFARENKIPFLGICFGMQMAVIE 391
GI +PG +G+ G E G+ +A I A E +IP IC G+Q V+
Sbjct: 64 GIYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMALINAALERRIPIFAICRGLQELVVA 123
Query: 392 AA----RNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDV 447
R L P E E +++ LP + A +++V
Sbjct: 124 TGGSLHRKLCEQP-----ELLE---------------HREDPELPVEQQYAP----SHEV 159
Query: 448 SLKEETLISRIYGLDLIPERHRHRYEVNVRYRE--KLEGCGLKFSGFSVDHALPEVVEYI 505
++E L+S L+PE + VN + + K+ L+ S D L E V I
Sbjct: 160 QVEEGGLLSA-----LLPECSN--FWVNSLHGQGAKVVSPRLRVEARSPD-GLVEAVSVI 211
Query: 506 NHPWFIGVQYHPELKSRPLD-PHPLFVSFIQA 536
NHP+ +GVQ+HPE S LF FI A
Sbjct: 212 NHPFALGVQWHPEWNSSEYALSRILFEGFITA 243
|
Length = 254 |
| >gnl|CDD|116336 pfam07722, Peptidase_C26, Peptidase C26 | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 3e-04
Identities = 46/193 (23%), Positives = 73/193 (37%), Gaps = 53/193 (27%)
Query: 347 VHGILVPGG--------FGKRGSE-----------GKIAAIKFARENKIPFLGICFGMQ- 386
V G+L+ GG +G+ S ++A I+ A E P LGIC GMQ
Sbjct: 59 VDGLLLTGGQSNVDPSLYGEEPSPSGGYYDPARDAFELALIRAALERGKPILGICRGMQL 118
Query: 387 MAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYD 446
+ V G G + D + ++
Sbjct: 119 LNVA------LG------------GTLYQDIPEHPGNSDHHHQLAVQY-------APSHA 153
Query: 447 VSLKEETLISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYIN 506
VSL+ +L++R+ G + I H + ++L GL+ + D E +E N
Sbjct: 154 VSLEPGSLLARLLGAEEILVNSLHHQAI-----KRL-APGLRVEATAPD-GTIEAIESPN 206
Query: 507 HPWF-IGVQYHPE 518
P+F +GVQ+HPE
Sbjct: 207 APYFVLGVQWHPE 219
|
These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C terminus. Length = 219 |
Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
| Identity | Alignment graph | Length | Definition | Probability |
| Target | 544 | CTP synthetase [Candidatus Liberibacter asiaticus str. | ||
| TIGR00337 | 571 | PyrG CTP synthase; InterPro: IPR004468 CTP synthase is | 100.0 | |
| PRK05380 | 534 | pyrG CTP synthetase; Validated | 100.0 | |
| COG0504 | 533 | PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide trans | 100.0 | |
| KOG2387 | 585 | consensus | 100.0 | |
| PRK01077 | 451 | cobyrinic acid a,c-diamide synthase; Validated | 99.37 | |
| COG1797 | 451 | CobB Cobyrinic acid a,c-diamide synthase [Coenzyme meta | 98.41 | |
| pfam06418 | 275 | CTP_synth_N CTP synthase N-terminus. This family consis | 100.0 | |
| cd03113 | 255 | CTGs CTP synthetase (CTPs) is a two-domain protein, whi | 100.0 | |
| cd01746 | 235 | GATase1_CTP_Synthase Type 1 glutamine amidotransferase | 100.0 | |
| PRK06186 | 229 | hypothetical protein; Validated | 100.0 | |
| pfam07722 | 219 | Peptidase_C26 Peptidase C26. These peptidases have gamm | 99.92 | |
| pfam00117 | 187 | GATase Glutamine amidotransferase class-I. | 99.86 | |
| PRK00758 | 184 | GMP synthase subunit A; Validated | 99.69 | |
| PRK13147 | 211 | consensus | 99.65 | |
| cd01742 | 181 | GATase1_GMP_Synthase Type 1 glutamine amidotransferase | 99.64 | |
| PRK13141 | 204 | hisH imidazole glycerol phosphate synthase subunit HisH | 99.64 | |
| PRK13143 | 201 | hisH imidazole glycerol phosphate synthase subunit HisH | 99.61 | |
| cd01744 | 178 | GATase1_CPSase Small chain of the glutamine-dependent f | 99.6 | |
| cd01748 | 198 | GATase1_IGP_Synthase Type 1 glutamine amidotransferase | 99.6 | |
| PRK05670 | 192 | anthranilate synthase component II; Provisional | 99.57 | |
| PRK13176 | 216 | consensus | 99.56 | |
| cd01743 | 184 | GATase1_Anthranilate_Synthase Type 1 glutamine amidotra | 99.55 | |
| COG0118 | 204 | HisH Glutamine amidotransferase [Amino acid transport a | 99.54 | |
| PRK07649 | 195 | para-aminobenzoate/anthranilate synthase glutamine amid | 99.54 | |
| PRK13152 | 201 | hisH imidazole glycerol phosphate synthase subunit HisH | 99.53 | |
| PRK12564 | 355 | carbamoyl phosphate synthase small subunit; Reviewed | 99.51 | |
| PRK13153 | 203 | consensus | 99.51 | |
| PRK08007 | 187 | para-aminobenzoate synthase component II; Provisional | 99.49 | |
| CHL00101 | 190 | trpG anthranilate synthase component 2 | 99.49 | |
| PRK13181 | 199 | hisH imidazole glycerol phosphate synthase subunit HisH | 99.49 | |
| CHL00188 | 210 | hisH imidazole glycerol phosphate synthase subunit hisH | 99.48 | |
| PRK13175 | 206 | consensus | 99.48 | |
| PRK13179 | 207 | consensus | 99.47 | |
| PRK07765 | 221 | para-aminobenzoate synthase component II; Provisional | 99.47 | |
| PRK13177 | 207 | consensus | 99.47 | |
| PRK13146 | 208 | hisH imidazole glycerol phosphate synthase subunit HisH | 99.47 | |
| PRK13173 | 211 | consensus | 99.46 | |
| PRK13171 | 200 | consensus | 99.45 | |
| TIGR01855 | 211 | IMP_synth_hisH imidazole glycerol phosphate synthase, g | 99.45 | |
| PRK06895 | 191 | para-aminobenzoate synthase component II; Provisional | 99.43 | |
| PRK06774 | 191 | para-aminobenzoate synthase component II; Provisional | 99.42 | |
| PRK13174 | 212 | consensus | 99.42 | |
| PRK13148 | 225 | consensus | 99.41 | |
| PRK13178 | 213 | consensus | 99.4 | |
| PRK13144 | 190 | consensus | 99.39 | |
| PRK12838 | 356 | carbamoyl phosphate synthase small subunit; Reviewed | 99.39 | |
| PRK13170 | 196 | hisH imidazole glycerol phosphate synthase subunit HisH | 99.38 | |
| PRK13180 | 209 | consensus | 99.38 | |
| PRK13151 | 195 | consensus | 99.34 | |
| PRK08857 | 192 | para-aminobenzoate synthase component II; Provisional | 99.33 | |
| COG0505 | 368 | CarA Carbamoylphosphate synthase small subunit [Amino a | 99.3 | |
| PRK13172 | 213 | consensus | 99.29 | |
| cd01747 | 273 | GATase1_Glutamyl_Hydrolase Type 1 glutamine amidotransf | 99.29 | |
| PRK13566 | 724 | anthranilate synthase; Provisional | 99.21 | |
| PRK09522 | 531 | bifunctional anthranilate synthase/anthranilate phospho | 99.19 | |
| PRK13142 | 192 | hisH imidazole glycerol phosphate synthase subunit HisH | 99.16 | |
| PRK05637 | 208 | anthranilate synthase component II; Provisional | 99.16 | |
| TIGR01823 | 851 | PabB-fungal para-aminobenzoate synthase; InterPro: IPR0 | 99.05 | |
| TIGR00566 | 212 | trpG_papA glutamine amidotransferase of anthranilate sy | 98.89 | |
| COG0512 | 191 | PabA Anthranilate/para-aminobenzoate synthases componen | 98.89 | |
| KOG1224 | 767 | consensus | 98.85 | |
| PRK05665 | 240 | amidotransferase; Provisional | 98.79 | |
| KOG0623 | 541 | consensus | 98.58 | |
| PRK03619 | 223 | phosphoribosylformylglycinamidine synthase subunit I; P | 98.33 | |
| PRK01175 | 255 | phosphoribosylformylglycinamidine synthase subunit I; P | 98.07 | |
| KOG3179 | 245 | consensus | 98.0 | |
| cd03130 | 198 | GATase1_CobB Type 1 glutamine amidotransferase (GATase1 | 97.03 | |
| PRK05368 | 302 | homoserine O-succinyltransferase; Provisional | 96.67 | |
| pfam04204 | 298 | HTS Homoserine O-succinyltransferase. | 96.57 | |
| PRK11366 | 254 | puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; Prov | 99.96 | |
| COG2071 | 243 | Predicted glutamine amidotransferases [General function | 99.93 | |
| cd01745 | 189 | GATase1_2 Subgroup of proteins having the Type 1 glutam | 99.84 | |
| TIGR00888 | 195 | guaA_Nterm GMP synthase, N-terminal domain; InterPro: I | 99.46 | |
| cd01741 | 188 | GATase1_1 Subgroup of proteins having the Type 1 glutam | 99.19 | |
| PRK00074 | 513 | guaA GMP synthase; Reviewed | 99.13 | |
| PRK07567 | 242 | glutamine amidotransferase; Provisional | 98.95 | |
| PRK09065 | 238 | glutamine amidotransferase; Provisional | 98.95 | |
| PRK06490 | 243 | glutamine amidotransferase; Provisional | 98.9 | |
| COG0518 | 198 | GuaA GMP synthase - Glutamine amidotransferase domain [ | 98.88 | |
| PRK07053 | 235 | glutamine amidotransferase; Provisional | 98.85 | |
| PRK08250 | 235 | glutamine amidotransferase; Provisional | 98.83 | |
| TIGR01815 | 726 | TrpE-clade3 anthranilate synthase; InterPro: IPR010112 | 98.77 | |
| COG0047 | 231 | PurL Phosphoribosylformylglycinamidine (FGAM) synthase, | 98.5 | |
| KOG1622 | 552 | consensus | 98.2 | |
| TIGR01737 | 264 | FGAM_synth_I phosphoribosylformylglycinamidine synthase | 98.16 | |
| KOG0370 | 1435 | consensus | 98.07 | |
| KOG1559 | 340 | consensus | 97.72 | |
| KOG0026 | 223 | consensus | 97.68 | |
| TIGR01368 | 383 | CPSaseIIsmall carbamoyl-phosphate synthase, small subun | 99.54 | |
| CHL00197 | 383 | carA carbamoyl-phosphate synthase arginine-specific sma | 99.49 | |
| PRK13527 | 196 | glutamine amidotransferase subunit PdxT; Provisional | 99.49 | |
| pfam01174 | 188 | SNO SNO glutamine amidotransferase family. This family | 99.48 | |
| PRK13525 | 191 | glutamine amidotransferase subunit PdxT; Provisional | 99.41 | |
| cd01749 | 183 | GATase1_PB Glutamine Amidotransferase (GATase_I) involv | 99.28 | |
| cd01740 | 238 | GATase1_FGAR_AT Type 1 glutamine amidotransferase (GATa | 97.92 | |
| COG0311 | 194 | PDX2 Predicted glutamine amidotransferase involved in p | 97.91 | |
| cd01653 | 115 | GATase1 Type 1 glutamine amidotransferase (GATase1)-lik | 97.75 | |
| cd03128 | 92 | GAT_1 Type 1 glutamine amidotransferase (GATase1)-like | 97.67 | |
| PRK13526 | 179 | glutamine amidotransferase subunit PdxT; Provisional | 96.15 | |
| KOG3210 | 226 | consensus | 95.67 | |
| PRK05297 | 1294 | phosphoribosylformylglycinamidine synthase; Provisional | 95.28 | |
| PRK01911 | 290 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 94.51 | |
| PRK01231 | 296 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 94.42 | |
| PRK04759 | 294 | consensus | 94.12 | |
| PRK03378 | 292 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 94.11 | |
| PRK04539 | 296 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 93.6 | |
| PRK02649 | 305 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 93.57 | |
| PRK03372 | 303 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 93.44 | |
| PRK02155 | 291 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 93.01 | |
| cd03137 | 187 | GATase1_AraC_1 AraC transcriptional regulators having a | 92.43 | |
| PRK03708 | 278 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 92.18 | |
| PRK02645 | 304 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 90.77 | |
| cd03139 | 183 | GATase1_PfpI_2 Type 1 glutamine amidotransferase (GATas | 90.61 | |
| PRK00784 | 492 | cobyric acid synthase; Provisional | 99.16 | |
| pfam07685 | 158 | GATase_3 CobB/CobQ-like glutamine amidotransferase doma | 97.9 | |
| PRK13896 | 432 | cobyrinic acid a,c-diamide synthase; Provisional | 97.8 | |
| cd01750 | 194 | GATase1_CobQ Type 1 glutamine amidotransferase (GATase1 | 97.7 | |
| pfam01965 | 141 | DJ-1_PfpI DJ-1/PfpI family. The family includes the pro | 92.56 | |
| cd03131 | 175 | GATase1_HTS Type 1 glutamine amidotransferase (GATase1) | 92.47 | |
| cd03135 | 163 | GATase1_DJ-1 Type 1 glutamine amidotransferase (GATase1 | 92.31 | |
| cd03134 | 165 | GATase1_PfpI_like A type 1 glutamine amidotransferase ( | 91.13 | |
| COG0693 | 188 | ThiJ Putative intracellular protease/amidase [General f | 90.64 | |
| PRK00090 | 223 | bioD dithiobiotin synthetase; Reviewed | 97.16 | |
| pfam01656 | 212 | CbiA CobQ/CobB/MinD/ParA nucleotide binding domain. Thi | 96.65 | |
| COG0132 | 223 | BioD Dethiobiotin synthetase [Coenzyme metabolism] | 96.32 | |
| PRK12374 | 231 | putative dithiobiotin synthetase; Provisional | 95.45 | |
| pfam09140 | 261 | MipZ ATPase MipZ. MipZ is an ATPase that forms a comple | 94.56 | |
| COG2894 | 272 | MinD Septum formation inhibitor-activating ATPase [Cell | 92.7 | |
| PRK00081 | 199 | coaE dephospho-CoA kinase; Reviewed | 90.5 | |
| pfam02374 | 304 | ArsA_ATPase Anion-transporting ATPase. This Pfam family | 96.77 | |
| cd02040 | 270 | NifH NifH gene encodes component II (iron protein) of n | 95.48 | |
| cd01983 | 99 | Fer4_NifH The Fer4_NifH superfamily contains a variety | 94.86 | |
| CHL00175 | 279 | minD septum-site determining protein; Validated | 94.55 | |
| COG0003 | 322 | ArsA Predicted ATPase involved in chromosome partitioni | 93.9 | |
| TIGR03453 | 387 | partition_RepA plasmid partitioning protein RepA. Membe | 93.77 | |
| PRK13869 | 405 | plasmid-partitioning protein RepA; Provisional | 93.74 | |
| PRK10818 | 270 | cell division inhibitor MinD; Provisional | 93.14 | |
| cd03114 | 148 | ArgK-like The function of this protein family is unkown | 92.83 | |
| PRK13233 | 275 | nifH nitrogenase reductase; Reviewed | 91.03 | |
| PRK06761 | 281 | hypothetical protein; Provisional | 91.01 | |
| cd02035 | 217 | ArsA ArsA ATPase functionas as an efflux pump located o | 96.52 | |
| cd00550 | 254 | ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This | 95.59 | |
| cd02037 | 169 | MRP-like MRP (Multiple Resistance and pH adaptation) is | 92.11 | |
| TIGR00313 | 502 | cobQ cobyric acid synthase CobQ; InterPro: IPR004459 Co | 95.59 | |
| COG1492 | 486 | CobQ Cobyric acid synthase [Coenzyme metabolism] | 95.18 | |
| PRK06278 | 482 | cobyrinic acid a,c-diamide synthase; Validated | 94.33 | |
| TIGR01382 | 189 | PfpI intracellular protease, PfpI family; InterPro: IPR | 91.38 | |
| cd01391 | 269 | Periplasmic_Binding_Protein_Type_1 Type 1 periplasmic b | 90.63 | |
| cd06302 | 298 | PBP1_LsrB_Quorum_Sensing Periplasmic binding domain of | 90.44 |
| >TIGR00337 PyrG CTP synthase; InterPro: IPR004468 CTP synthase is involved in pyrimidine ribonucleotide/ribonucleoside metabolism | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=2131.87 Aligned_cols=534 Identities=55% Similarity=0.947 Sum_probs=521.3 Q ss_pred CCEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCC Q ss_conf 92399993750144444899999999999689828898544553348888886443507872798400255641133228 Q gi|254780195|r 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMG 80 (544) Q Consensus 1 m~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~ 80 (544) T Consensus 3 ~~KyifVTGGV~SslGKGI~AAS~grLL~~~gl~Vt~iKiDPYiN~DpGTMsP~qHGEVFVt~DG~EtDLDLGHYERFl~ 82 (571) T TIGR00337 3 MMKYIFVTGGVVSSLGKGITAASLGRLLKARGLKVTIIKIDPYINIDPGTMSPLQHGEVFVTDDGAETDLDLGHYERFLD 82 (571) T ss_pred CCEEEEEECCEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCHHHCC T ss_conf 61179994438504026789999999998558806576307755668763778635427880688764366654212227 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCC--------CCCEEEEECCCCCCCCCCCHH Q ss_conf 747754680125899999988857775774025646024898999970788--------987899972431222123068 Q gi|254780195|r 81 ISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGNE--------DADFVICEIGGTIGDIEVMPF 152 (544) Q Consensus 81 ~~l~~~~niT~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~~--------~~Dv~ivEiGGTVGDIEs~pF 152 (544) T Consensus 83 ~~l~~~~NiTTGkIY~~Vi~kERkGdYLG~TVQiIPHiTnEIK~~I~~~A~~P~eDtG~~~Dv~IvEiGGTVGDIEs~PF 162 (571) T TIGR00337 83 TNLTRDNNITTGKIYSSVIEKERKGDYLGKTVQIIPHITNEIKDRIKRVAKKPVEDTGSGADVVIVEIGGTVGDIESLPF 162 (571) T ss_pred CCCCCCCCCEECHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHH T ss_conf 66774566100668998841037712148827984255467899999960377645679974799983770000036258 Q ss_pred HHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCC Q ss_conf 99999999874977685799997467542256620034789999999974998768999238758999999998641988 Q gi|254780195|r 153 VEAIRQFGNEFSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVP 232 (544) Q Consensus 153 lEAiRQl~~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPDiivcRse~~l~~~~k~KIalfc~V~ 232 (544) T Consensus 163 LEAiRQ~~~e~G~--Env~~iHvTLVP~i~aagE~KTKPTQhSVKeLRs~Gi~PD~i~cRs~~~l~~~~k~KiAlFCdV~ 240 (571) T TIGR00337 163 LEAIRQLKKEVGR--ENVLFIHVTLVPYIAAAGELKTKPTQHSVKELRSLGIQPDIIICRSSEPLDKSLKKKIALFCDVE 240 (571) T ss_pred HHHHHHHHHHHCC--CCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCC T ss_conf 9999999987389--86799984002631448747877512789999860988868998188768977764521005889 Q ss_pred HHHEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCC---------CCCHHHHHHHHHHHCCCCCCEEEEEEHHHCCC Q ss_conf 677240389862026689887649488999983878888---------62047899999874184343799995200148 Q gi|254780195|r 233 MSAVIPALDVDDIYKVPLSYHREGIDSVVLNAFGIENVS---------LPQIDNWQTFCDRTLSLKNEVKVAIVGKYIHL 303 (544) Q Consensus 233 ~~~Vi~~~Dv~sIY~VPl~l~~q~l~~~I~~~L~l~~~~---------~~~l~~W~~~~~~~~~~~~~V~IaiVGKY~~l 303 (544) T Consensus 241 ~~aVI~~~Da~sIY~vPl~L~~egl~~~~~~rl~L~~~~~~ee~k~rG~~~Ls~W~~~v~~~~~~~~~v~Ig~VGKY~eL 320 (571) T TIGR00337 241 EEAVINAEDASSIYEVPLLLKKEGLDDYLCRRLNLNEKPLIEEEKERGEADLSEWEELVEKLINPKEEVTIGLVGKYVEL 320 (571) T ss_pred CCCEEEEECCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCH T ss_conf 73257865552401135210004335799998437877742012213755489999999863055251679897400251 Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCH----HHHHCC------CCEEEECCCCCCCCCHHHHHHHHHHHC Q ss_conf 1346888888888878736724167722565672344----566216------983997377786550168889988740 Q gi|254780195|r 304 KDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDP----VKHFYG------VHGILVPGGFGKRGSEGKIAAIKFARE 373 (544) Q Consensus 304 ~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~----~~~L~~------~dGIlVPGGFG~RGieGkI~Ai~yARe 373 (544) T Consensus 321 ~DaY~Sv~EAL~Hag~~~d~~v~i~Wi~s~d~e~~~~e~~k~~~l~~~~~~~~~DGILVPGGFG~RG~EGKI~Ai~yARE 400 (571) T TIGR00337 321 KDAYLSVIEALKHAGAKLDTKVNIKWIDSEDLEEEEQEVDKAELLDGWNELSEVDGILVPGGFGERGVEGKIRAIKYARE 400 (571) T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEEECHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHH T ss_conf 35678899999876776374256898621013200120013555322445430680683688897660247899999876 Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC-CCCCC---CEECCCHHCC-CCCCCCCCCCCCCCCEEEECCEEEE Q ss_conf 47632235576999999998751688999700035-66664---1211501123-4653001565546740231652578 Q gi|254780195|r 374 NKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFS-EAGVP---VIALMSEWMK-GDQQEKRLPSDDLGATMRLGAYDVS 448 (544) Q Consensus 374 n~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~-~~~~p---vI~~l~e~~~-~~~~~~~~~~~~~GGTMRLG~~~~~ 448 (544) T Consensus 401 N~iPFLGICLGmQ~A~IEFARNV~Gl~~AnStEf~~~t~~p~~~Vv~LlpEq~d~~~~~~VRt~~~~lGGTMRLG~ypc~ 480 (571) T TIGR00337 401 NNIPFLGICLGMQLAVIEFARNVLGLKGANSTEFDPETKYPKSPVVDLLPEQKDQNGNKEVRTEIEDLGGTMRLGLYPCI 480 (571) T ss_pred CCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEECCCCCCCCCCCEECCEEECCCCCEEECCCCCEE T ss_conf 36973302177788899997653479888741246455777331114253222446760013010138724305872217 Q ss_pred ECCC---CHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCC Q ss_conf 5587---0668863798476602523332788998999789599998699986899983899849997248773278769 Q gi|254780195|r 449 LKEE---TLISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLD 525 (544) Q Consensus 449 l~~~---S~~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~ 525 (544) T Consensus 481 l~~~~eWt~a~klYg~~~v~ERHRHRYE~Nn~~~~~~E~~GL~vsG~S~dg~l~EiiE~~~HP~FvA~QFHPEF~Srp~~ 560 (571) T TIGR00337 481 LKPGSEWTLAFKLYGKEEVYERHRHRYEVNNEYREELENKGLIVSGTSPDGRLVEIIELPDHPFFVACQFHPEFTSRPNR 560 (571) T ss_pred ECCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCC T ss_conf 71787232675533786788712444122757898998579589998699838999984797868886226751167788 Q ss_pred CCHHHHHHHHH Q ss_conf 88415899999 Q gi|254780195|r 526 PHPLFVSFIQA 536 (544) Q Consensus 526 phPLF~~fi~A 536 (544) T Consensus 561 p~plF~Gfv~A 571 (571) T TIGR00337 561 PHPLFLGFVKA 571 (571) T ss_pred CCCCCHHHHCC T ss_conf 88750553249 |
The enzyme catalyzes the reaction L-glutamine + H2O + UTP + ATP = CTP + phosphate + ADP + L-glutamate. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. This gene has been found circa 500 bp 5 upstream of enolase in both beta (Nitrosomonas europaea) and gamma (Escherichia coli) subdivisions of Proteobacterium .; GO: 0003883 CTP synthase activity, 0006221 pyrimidine nucleotide biosynthetic process. |
| >PRK05380 pyrG CTP synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=1968.12 Aligned_cols=531 Identities=61% Similarity=1.036 Sum_probs=521.9 Q ss_pred CCEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCC Q ss_conf 92399993750144444899999999999689828898544553348888886443507872798400255641133228 Q gi|254780195|r 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMG 80 (544) Q Consensus 1 m~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~ 80 (544) T Consensus 1 ~tKyIfVTGGVvS~lGKGi~aaSig~lLk~~G~~V~~~K~DPYlNvD~GTMsP~qHGEVfVt~DG~EtDLDLGhYERFl~ 80 (534) T PRK05380 1 MTKYIFVTGGVVSSLGKGITAASLGALLKARGLKVTIQKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFLD 80 (534) T ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCC T ss_conf 96099996983015740899999999999789658898414652258998896657537888887401466751354348 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH Q ss_conf 74775468012589999998885777577402564602489899997078898789997243122212306899999999 Q gi|254780195|r 81 ISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFG 160 (544) Q Consensus 81 ~~l~~~~niT~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~~~~Dv~ivEiGGTVGDIEs~pFlEAiRQl~ 160 (544) T Consensus 81 ~~l~~~~niTtGkiy~~Vi~kER~G~YLG~TVQvIPHiTdeIk~~i~~~a~~~Dv~ivEiGGTVGDIEs~pFlEAiRQ~~ 160 (534) T PRK05380 81 TNLSKYNNVTTGKIYSSVIEKERRGDYLGKTVQVIPHITDEIKERILRAAEGADVVIVEIGGTVGDIESLPFLEAIRQLR 160 (534) T ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEECCCEEEHHCCCHHHHHHHHHH T ss_conf 88766666033398999988874578688734778886689999999727788889997576210110268999999998 Q ss_pred HHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHEEECC Q ss_conf 87497768579999746754225662003478999999997499876899923875899999999864198867724038 Q gi|254780195|r 161 NEFSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240 (544) Q Consensus 161 ~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPDiivcRse~~l~~~~k~KIalfc~V~~~~Vi~~~ 240 (544) T Consensus 161 ~e~g~--~n~~~iHvtlvP~l~~~gE~KTKPTQhSVkeLr~~GIqPDilvcRse~~l~~~~k~KIalfcnV~~~~VI~~~ 238 (534) T PRK05380 161 LELGR--ENVLFIHLTLVPYIAAAGELKTKPTQHSVKELRSIGIQPDILVCRSERPLPEEEKRKIALFCNVPEEAVISAP 238 (534) T ss_pred HHHCC--CCEEEEEEECCCEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHEEECC T ss_conf 76087--8789999731310147875467731888999996589987478625776898999988641588789968626 Q ss_pred CCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHH Q ss_conf 98620266898876494889999838788886204789999987418434379999520014813468888888888787 Q gi|254780195|r 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKYIHLKDAYRSLIEALRHSGVS 320 (544) Q Consensus 241 Dv~sIY~VPl~l~~q~l~~~I~~~L~l~~~~~~~l~~W~~~~~~~~~~~~~V~IaiVGKY~~l~DaY~Si~EAL~hA~~~ 320 (544) T Consensus 239 Dv~sIYeVPl~l~~qgl~~~I~~~L~L~~-~~~~l~~W~~~v~~~~~~~~~V~IaiVGKYv~L~DaY~Sv~EAL~Hag~~ 317 (534) T PRK05380 239 DVDSIYEVPLLLHEQGLDDIVLKRLGLEA-PEPDLSEWEDLVERIKNPKGEVTIALVGKYVELPDAYKSVIEALKHAGIA 317 (534) T ss_pred CCCHHHHHHHHHHHCCCHHHHHHHHCCCC-CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH T ss_conf 85237776899998583899999867898-99789999999998758765569998631367860499999999988886 Q ss_pred HCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 36724167722565672344566216983997377786550168889988740476322355769999999987516889 Q gi|254780195|r 321 NYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIP 400 (544) Q Consensus 321 ~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~ 400 (544) T Consensus 318 ~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGiEGKI~Ai~yARen~IPfLGICLGMQ~avIEfARNVlgl~ 397 (534) T PRK05380 318 NDVKVNIKWIDSEDLEEENVAELLKDVDGILVPGGFGERGIEGKILAIRYARENNIPFLGICLGMQLAVIEFARNVLGLE 397 (534) T ss_pred CCCCCEEEEEEHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCC T ss_conf 38742279988576366467777631882995787665431568999999998199811011223788999999845899 Q ss_pred CCCHHHCC-CCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHC-CCEEEEECCCCCCCCHHH Q ss_conf 99700035-6666412115011234653001565546740231652578558706688637-984766025233327889 Q gi|254780195|r 401 NACSTEFS-EAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYG-LDLIPERHRHRYEVNVRY 478 (544) Q Consensus 401 dAnStEf~-~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg-~~~I~ERHRHRYEvN~~y 478 (544) T Consensus 398 dAnStEfd~~t~~pVI~lm~eq~~---------~~~~GGTMRLG~y~~~l~~gS~a~~~Yg~~~~I~ERHRHRYEvN~~y 468 (534) T PRK05380 398 DANSTEFDPDTPHPVIDLMPEQKD---------VSDLGGTMRLGAYPCKLKPGTLAAEIYGKTEVIYERHRHRYEVNNKY 468 (534) T ss_pred CCCEEECCCCCCCCEEEECHHHCC---------CCCCCCEEECCCEEEEECCCCHHHHHHCCCCEECCCCCCCCCCCHHH T ss_conf 973253589999986998823137---------76566604516445675688899998589981666456420018999 Q ss_pred HHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC Q ss_conf 98999789599998699986899983899849997248773278769884158999999987644 Q gi|254780195|r 479 REKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLYSQS 543 (544) Q Consensus 479 ~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aal~~~~~ 543 (544) T Consensus 469 ~~~le~~Gl~~sG~s~d~~lvEiiEl~~HpfFvg~QfHPEfkSrP~~PhPlF~~fI~Aal~~~~~ 533 (534) T PRK05380 469 REQLEKAGLVFSGTSPDGRLVEIIELPDHPWFVGVQFHPEFKSRPRRPHPLFAGFVKAALEYKKR 533 (534) T ss_pred HHHHHHCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC T ss_conf 99999789799999899987899986899808996577665789999983699999999987524 |
|
| >COG0504 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=1854.03 Aligned_cols=530 Identities=59% Similarity=1.005 Sum_probs=516.1 Q ss_pred CEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCC Q ss_conf 23999937501444448999999999996898288985445533488888864435078727984002556411332287 Q gi|254780195|r 2 VKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMGI 81 (544) Q Consensus 2 ~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~~ 81 (544) T Consensus 1 ~KyIfVTGGVvSslGKGi~aaSlg~lLk~rG~~Vt~~KlDPYlNvDpGTMsP~qHGEVfVtdDG~EtDLDLGhYERF~~~ 80 (533) T COG0504 1 TKYIFVTGGVVSSLGKGITAASLGRLLKARGLKVTIQKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFLDV 80 (533) T ss_pred CEEEEEECCEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCC T ss_conf 90899918850366427999999999997797478983266400388878856574289888875025666414654478 Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCC-CCEEEEECCCCCCCCCCCHHHHHHHHHH Q ss_conf 477546801258999999888577757740256460248989999707889-8789997243122212306899999999 Q gi|254780195|r 82 STAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGNED-ADFVICEIGGTIGDIEVMPFVEAIRQFG 160 (544) Q Consensus 82 ~l~~~~niT~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~~~-~Dv~ivEiGGTVGDIEs~pFlEAiRQl~ 160 (544) T Consensus 81 ~l~~~~niTtGkiY~~Vi~kER~GdYLG~TVQvIPHiT~eIk~~I~~~a~~~~DvvivEIGGTVGDIEslpFlEAiRQ~~ 160 (533) T COG0504 81 NLSKDNNITTGKIYSEVIEKERRGDYLGKTVQVIPHITDEIKDRIREAADSTADVVIVEIGGTVGDIESLPFLEAIRQLR 160 (533) T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCEECCCCCHHHHHHHHHH T ss_conf 76666784333889999877744775685468878762689999998257888889998177122223367899999987 Q ss_pred HHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHEEECC Q ss_conf 87497768579999746754225662003478999999997499876899923875899999999864198867724038 Q gi|254780195|r 161 NEFSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240 (544) Q Consensus 161 ~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPDiivcRse~~l~~~~k~KIalfc~V~~~~Vi~~~ 240 (544) T Consensus 161 ~e~g~--~n~~fiH~tlvpyi~~~gE~KTKPTQhSVkeLR~iGI~PDiii~Rs~~~l~~~~~~KIAlfc~V~~~~Vi~~~ 238 (533) T COG0504 161 LELGR--ENVLFIHVTLVPYIAAAGELKTKPTQHSVKELRSIGIQPDILICRSERPLPEEERRKIALFCNVPEEAVISAP 238 (533) T ss_pred HHHCC--CCEEEEEEECCEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHEEECC T ss_conf 67362--5689999733203615675578884277899996589966599945887998999999986389888857346 Q ss_pred CCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHH Q ss_conf 98620266898876494889999838788886204789999987418434379999520014813468888888888787 Q gi|254780195|r 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKYIHLKDAYRSLIEALRHSGVS 320 (544) Q Consensus 241 Dv~sIY~VPl~l~~q~l~~~I~~~L~l~~~~~~~l~~W~~~~~~~~~~~~~V~IaiVGKY~~l~DaY~Si~EAL~hA~~~ 320 (544) T Consensus 239 Dv~siY~vPl~l~~qgl~~~i~~~l~l~-~~~~dl~~W~~~v~~i~~~~~~v~IalVGKYv~l~DaY~Sv~EAL~hag~~ 317 (533) T COG0504 239 DVESIYEVPLLLEKQGLDDYILERLNLN-APEPDLSEWKDLVDKIKNPKKEVTIALVGKYVELPDAYKSVIEALKHAGIA 317 (533) T ss_pred CHHHHHHHHHHHHHCCHHHHHHHHHCCC-CCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH T ss_conf 6788877189998753278999985899-887556779999998528777269999876758606799999999950764 Q ss_pred HCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 36724167722565672344566216983997377786550168889988740476322355769999999987516889 Q gi|254780195|r 321 NYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIP 400 (544) Q Consensus 321 ~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~ 400 (544) T Consensus 318 ~~~~v~i~wIdse~le~~~~~~~~~~~dgIlVPGGFG~RG~eGkI~Ai~yAREn~iP~lGIClGmQ~aviE~ARnv~Gl~ 397 (533) T COG0504 318 LGVKVNIKWIDSEDLEEENAAELEKLVDGILVPGGFGYRGVEGKIAAIRYARENNIPFLGICLGMQLAVIEFARNVLGLE 397 (533) T ss_pred CCCCCEEEEECCCCCCCCCHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCC T ss_conf 19840269875123665444556631887996898776755889999999986699868885667899999999851976 Q ss_pred CCCHHHCC-CCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCHHHH Q ss_conf 99700035-66664121150112346530015655467402316525785587066886379847660252333278899 Q gi|254780195|r 401 NACSTEFS-EAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYR 479 (544) Q Consensus 401 dAnStEf~-~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I~ERHRHRYEvN~~y~ 479 (544) T Consensus 398 ~AnS~Efdp~t~~pVv~l~~eq~~---------~~~lGGTmRLG~y~~~l~~gT~a~~lY~~~~v~ERHRHRYEvN~~y~ 468 (533) T COG0504 398 GANSTEFDPDTKYPVVDLMPEQKD---------VVDLGGTMRLGAYPCRLKPGTLAAKLYGKDEIYERHRHRYEVNNDYR 468 (533) T ss_pred CCCCCCCCCCCCCCEEEECCCCCC---------CCCCCCEEECCCEEEECCCCCHHHHHHCCCCEEEECCCHHHCCHHHH T ss_conf 576435488999865883354236---------77677500416610112788689987387714002153133088999 Q ss_pred HHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC Q ss_conf 8999789599998699986899983899849997248773278769884158999999987644 Q gi|254780195|r 480 EKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLYSQS 543 (544) Q Consensus 480 ~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aal~~~~~ 543 (544) T Consensus 469 ~~le~~Gl~~sg~s~d~~lvEivE~~~hpfFv~~QfHPEf~SrP~~phPlf~~fv~Aa~~~~~~ 532 (533) T COG0504 469 DQLEKAGLVFSGTSPDGGLVEIVELPDHPFFVATQFHPEFKSRPLRPHPLFVGFVKAALEYKKD 532 (533) T ss_pred HHHHHCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCC T ss_conf 9998689699998689986899983899648987466313478999983479999999975317 |
|
| >KOG2387 consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=1661.12 Aligned_cols=528 Identities=47% Similarity=0.857 Sum_probs=511.1 Q ss_pred CEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCC Q ss_conf 23999937501444448999999999996898288985445533488888864435078727984002556411332287 Q gi|254780195|r 2 VKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMGI 81 (544) Q Consensus 2 ~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~~ 81 (544) T Consensus 1 MKYVlVtGGVISGiGKGv~aSSiG~lLKs~Gl~VTsIKIDPYlN~DAGTmSPyEHGEVfVLDDGgEvDLDLGNYERfldi 80 (585) T KOG2387 1 MKYVLVTGGVISGIGKGIIASSIGVLLKSCGLRVTSIKIDPYLNIDAGTMSPYEHGEVFVLDDGGEVDLDLGNYERFLDI 80 (585) T ss_pred CEEEEEECCEEECCCCCEEEHHHHHHHHHCCCEEEEEEECCCEECCCCCCCCCCCCEEEEECCCCEECCCCCCHHHHCCC T ss_conf 90899947676145674231237799985693468987355401267655755464499966896004556446654263 Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCC--------CCCCEEEEECCCCCCCCCCCHHH Q ss_conf 4775468012589999998885777577402564602489899997078--------89878999724312221230689 Q gi|254780195|r 82 STAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGN--------EDADFVICEIGGTIGDIEVMPFV 153 (544) Q Consensus 82 ~l~~~~niT~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~--------~~~Dv~ivEiGGTVGDIEs~pFl 153 (544) T Consensus 81 ~Lt~dNNITtGKiy~~Vi~kER~GdYLGKTVQvvPHiTdaIq~WiervA~iPVdg~~~~pdVCvIELGGTvGDiEs~pfv 160 (585) T KOG2387 81 TLTRDNNITTGKIYQHVIEKERRGDYLGKTVQVVPHITDAIQDWIERVARIPVDGTGGEPDVCVIELGGTVGDIESMPFV 160 (585) T ss_pred EEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEECCCCCCHHH T ss_conf 44236874521689998756523653265368553346899999999744886788999988999868520331346799 Q ss_pred HHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCH Q ss_conf 99999998749776857999974675422566200347899999999749987689992387589999999986419886 Q gi|254780195|r 154 EAIRQFGNEFSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPM 233 (544) Q Consensus 154 EAiRQl~~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPDiivcRse~~l~~~~k~KIalfc~V~~ 233 (544) T Consensus 161 eAl~qFq~~vg~--~Nf~~iHVsLVp~l~~~gEqKTKPtQ~svr~LR~lGL~Pd~iaCRs~~~l~~~vk~Kis~FChV~~ 238 (585) T KOG2387 161 EALRQFQFKVGR--ENFCLIHVSLVPVLSVTGEQKTKPTQHSVRDLRGLGLSPDLIACRSTKPLEMSVKEKISMFCHVGP 238 (585) T ss_pred HHHHHHEECCCC--CCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCH T ss_conf 999862021257--747999998887214665666761577788887468986557881688777779998866135478 Q ss_pred HHEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCC--CCHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHH Q ss_conf 772403898620266898876494889999838788886--204789999987418434379999520014813468888 Q gi|254780195|r 234 SAVIPALDVDDIYKVPLSYHREGIDSVVLNAFGIENVSL--PQIDNWQTFCDRTLSLKNEVKVAIVGKYIHLKDAYRSLI 311 (544) Q Consensus 234 ~~Vi~~~Dv~sIY~VPl~l~~q~l~~~I~~~L~l~~~~~--~~l~~W~~~~~~~~~~~~~V~IaiVGKY~~l~DaY~Si~ 311 (544) T Consensus 239 eqV~~~hDv~siyhvPllL~~q~~~e~l~~~L~L~~~~~~~~~l~~W~~~~~~~d~~~~~V~IalVGKYt~l~DsY~Sv~ 318 (585) T KOG2387 239 EQVVGLHDVSSIYHVPLLLEEQGIVEYLNRRLGLSIISSERPMLDKWSNMAERYDDLQVPVRIALVGKYTKLSDSYLSVV 318 (585) T ss_pred HHEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHH T ss_conf 99555226761101127776634999999984877221332569999999875534467179999851456117799999 Q ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCC----------CHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHH Q ss_conf 888888787367241677225656723----------4456621698399737778655016888998874047632235 Q gi|254780195|r 312 EALRHSGVSNYTKVQLSWIDAETLEKE----------DPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLGI 381 (544) Q Consensus 312 EAL~hA~~~~~~kv~i~wIdse~le~~----------~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai~yARen~iP~LGI 381 (544) T Consensus 319 KAL~Ha~~~~~~kl~i~wi~s~dLE~~t~~e~~~~~~~aW~~l~~adGilvPGGFG~RGveG~i~Aak~ARen~iP~LGi 398 (585) T KOG2387 319 KALEHAALAINRKLEIVWIDSSDLEPETEQEDPRKYHAAWQKLKSADGILVPGGFGDRGVEGKILAAKWARENKIPFLGI 398 (585) T ss_pred HHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEE T ss_conf 99987788736661499975101565434457267899998752488289678665443057899999987649975763 Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHCC-CCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEEC-CCCHHHHHH Q ss_conf 576999999998751688999700035-666641211501123465300156554674023165257855-870668863 Q gi|254780195|r 382 CFGMQMAVIEAARNLAGIPNACSTEFS-EAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLK-EETLISRIY 459 (544) Q Consensus 382 ClGmQ~avIEfARnvlgl~dAnStEf~-~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~-~~S~~~~iY 459 (544) T Consensus 399 CLGmQ~AvIEfaRnvLg~~dAnStEF~p~~~~~vVi~MPE~~----------~~~mGgtMRLG~R~t~f~~~~s~~~kLY 468 (585) T KOG2387 399 CLGMQLAVIEFARNVLGLKDANSTEFDPETKNPVVIFMPEHN----------KTHMGGTMRLGSRRTVFQDKDSKLRKLY 468 (585) T ss_pred EHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCC----------CCCCCCEEEECCCCEEEECCCHHHHHHH T ss_conf 111269999999986177778732248788986799876887----------4444644662464116505715789875 Q ss_pred C-CCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 7-984766025233327889989997895999986999868999838998499972487732787698841589999999 Q gi|254780195|r 460 G-LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATV 538 (544) Q Consensus 460 g-~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aal 538 (544) T Consensus 469 G~~~~V~ERHRHRyEVNP~~v~~le~~Gl~FvGkd~~g~rmeI~El~~HP~fVg~QfHPE~~srp~kpsp~flGlv~as~ 548 (585) T KOG2387 469 GNVEFVDERHRHRYEVNPEMVKQLEQAGLSFVGKDVTGKRMEIIELESHPFFVGVQFHPEFKSRPDKPSPLFLGLVAASC 548 (585) T ss_pred CCCHHHHHHHHCCEECCHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCCEEEECCCHHHHCCCCCCCCCHHHHHHHHH T ss_conf 79504656541101148899999986696898516888578899807987256531377774589999965267678777 Q ss_pred HHH Q ss_conf 876 Q gi|254780195|r 539 LYS 541 (544) Q Consensus 539 ~~~ 541 (544) T Consensus 549 ~~l 551 (585) T KOG2387 549 GRL 551 (585) T ss_pred HHH T ss_conf 668 |
|
| >PRK01077 cobyrinic acid a,c-diamide synthase; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.2e-09 Score=90.07 Aligned_cols=407 Identities=17% Similarity=0.199 Sum_probs=194.5 Q ss_pred EEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCC Q ss_conf 99375014444489999999999968982889854455334888888644350787279840025564113322874775 Q gi|254780195|r 6 FITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMGISTAK 85 (544) Q Consensus 6 ~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~~~l~~ 85 (544) T Consensus 6 lmI~gt~S~~GKT~vt~gL~r~l~~rG~~VapFK~GPDy-Id-----p~~~~~a--~----------g~~~~nLD~---- 63 (451) T PRK01077 6 LVIAAPASGSGKTTVTLGLMRALRRRGLRVQPFKVGPDY-ID-----PAFHAAA--T----------GRPSRNLDS---- 63 (451) T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CC-----HHHHHHH--H----------CCCCCCCCH---- T ss_conf 999868999978999999999999687945753578576-29-----8999999--7----------897535883---- Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEECC-----CCCCCCC-CCHHHHHHHHH Q ss_conf 46801258999999888577757740256460248989999707889878999724-----3122212-30689999999 Q gi|254780195|r 86 ADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGNEDADFVICEIG-----GTIGDIE-VMPFVEAIRQF 159 (544) Q Consensus 86 ~~niT~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~~~~Dv~ivEiG-----GTVGDIE-s~pFlEAiRQl 159 (544) T Consensus 64 ---~l~~~--------------------------~~v~~~~~~~~~~~D~~viEG~mGlyDG~~~~~~~gS~-----aei 109 (451) T PRK01077 64 ---WMMGE--------------------------DLVRALFARAAGGADIAVIEGVMGLFDGAGGDPDKGST-----ADI 109 (451) T ss_pred ---HHCCH--------------------------HHHHHHHHHHCCCCCEEEEEECHHCCCCCCCCCCCCCH-----HHH T ss_conf ---44899--------------------------99999999754668889985010113454567777778-----999 Q ss_pred HHHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC-----EEEEE--CCCCCCHHHHHHHHHHCCCC Q ss_conf 987497768579999746754225662003478999999997499876-----89992--38758999999998641988 Q gi|254780195|r 160 GNEFSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHPD-----ILLIR--ADRDIPEMERRKISLFCNVP 232 (544) Q Consensus 160 ~~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPD-----iivcR--se~~l~~~~k~KIalfc~V~ 232 (544) T Consensus 110 A~~l~---~PViLV-------iD~~~~~~s--~aa~v~G~~~~--~~~~~I~GvIlNk~~g~~h-~~ll~~~ie-~~gvp 173 (451) T PRK01077 110 ARLLG---APVVLV-------VDASGMAQS--AAALVLGFARF--DPDLNIAGVILNRVGSERH-YQLLREALE-ELGLP 173 (451) T ss_pred HHHHC---CCEEEE-------ECCCCHHHH--HHHHHHHHHHH--CCCCCEEEEEEECCCCHHH-HHHHHHHHH-HCCCC T ss_conf 98709---988999-------846620899--99999999975--9778774899624787668-999999998-63995 Q ss_pred HHHEEECCCCCCHHHHHH-------HHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHH----------HHCCCCCCEEEE Q ss_conf 677240389862026689-------887649488999983878888620478999998----------741843437999 Q gi|254780195|r 233 MSAVIPALDVDDIYKVPL-------SYHREGIDSVVLNAFGIENVSLPQIDNWQTFCD----------RTLSLKNEVKVA 295 (544) Q Consensus 233 ~~~Vi~~~Dv~sIY~VPl-------~l~~q~l~~~I~~~L~l~~~~~~~l~~W~~~~~----------~~~~~~~~V~Ia 295 (544) T Consensus 174 vlG~lP~~~~l~---lpeRHLGLv~~~E~~~~~~~~-~~~~~~~~~~id~~~l~~i~~~~~~~~~~~~~~~~~~~~~rIa 249 (451) T PRK01077 174 VLGALPRDAALA---LPERHLGLVQASEIADLEARL-DALADLVEAHVDLDALLALARAAPAAPAPPPPLPTPPPGVRIA 249 (451) T ss_pred EEEEECCCCCCC---CCCCCCCCCCHHHHHHHHHHH-HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE T ss_conf 798615763345---642125776704566689999-9999999861799999998504776676554444567897699 Q ss_pred EEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCC------CHHHHHHHH Q ss_conf 95200148134688888888887873672416772256567234456621698399737778655------016888998 Q gi|254780195|r 296 IVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG------SEGKIAAIK 369 (544) Q Consensus 296 iVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RG------ieGkI~Ai~ 369 (544) T Consensus 250 va~D-~AF~FyY~enl~~L~~~G------ael~~fSPl~--d---~~lP~~~D~l~lpGGyPEl~a~~L~~n~~l~~~I~ 317 (451) T PRK01077 250 VARD-AAFSFYYPDNLELLRAAG------AELVFFSPLA--D---EALPDDCDALYLGGGYPELFAAELAANTSMRASIR 317 (451) T ss_pred EECC-CCCCCCCHHHHHHHHHCC------CEEEEECCCC--C---CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH T ss_conf 9434-224755766799999789------8899957767--8---88986678899579850243999987089999999 Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEE Q ss_conf 87404763223557699999999875168899970003566664121150112346530015655467402316525785 Q gi|254780195|r 370 FARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSL 449 (544) Q Consensus 370 yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l 449 (544) T Consensus 318 ~~~~~G~pi~aeCGG~~~L----g~~i---~d~~-----G~~~~m~Gllp~~t~~~-----------~~~~~~GY~~~~~ 374 (451) T PRK01077 318 AAAAAGKPIYAECGGLMYL----GESL---EDAD-----GERHPMVGLLPGEASMT-----------KRLAALGYREAEL 374 (451) T ss_pred HHHHCCCCEEEECHHHHHH----HHHC---CCCC-----CCEEECCCCCCEEEEEC-----------CCCCCCCCEEEEE T ss_conf 9998699789987117887----5432---7789-----98852435401377986-----------7855225469995 Q ss_pred CCCCHHHHHHCC-CEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCC--EEEEEEECCCCEEEEEECCCCCCCCCCCC Q ss_conf 587066886379-847660252333278899899978959999869998--68999838998499972487732787698 Q gi|254780195|r 450 KEETLISRIYGL-DLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHA--LPEVVEYINHPWFIGVQYHPELKSRPLDP 526 (544) Q Consensus 450 ~~~S~~~~iYg~-~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~--lvEiiEl~~HpffvgvQfHPEf~Srp~~p 526 (544) T Consensus 375 ~~~~~~~~~-g~~i~GHEfHys~~~~~~-------~~-~~~~~~~~~g~~~~~~G~~~---~nv~asy~Hlh~~s~p--- 439 (451) T PRK01077 375 LADTLLGAA-GERLRGHEFHYSTLEETP-------LE-PLYRVRDADGGPVGEGGYRR---GNVLASYLHLHFASNP--- 439 (451) T ss_pred CCCCCCCCC-CCEEEEEEECCEECCCCC-------CC-EEEEEECCCCCCCCCCEEEE---CCEEEEEEEECCCCCH--- T ss_conf 489756679-978989854264641799-------87-00899868999888587997---9999996375268498--- Q ss_pred CHHHHHHHHHHHH Q ss_conf 8415899999998 Q gi|254780195|r 527 HPLFVSFIQATVL 539 (544) Q Consensus 527 hPLF~~fi~Aal~ 539 (544) T Consensus 440 -~~~~~fv~~~~~ 451 (451) T PRK01077 440 -DAAARLLAAARR 451 (451) T ss_pred -HHHHHHHHHHHC T ss_conf -999999999509 |
|
| >COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.41 E-value=9.5e-06 Score=62.04 Aligned_cols=403 Identities=19% Similarity=0.230 Sum_probs=219.0 Q ss_pred EEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCC Q ss_conf 99375014444489999999999968982889854455334888888644350787279840025564113322874775 Q gi|254780195|r 6 FITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMGISTAK 85 (544) Q Consensus 6 ~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~~~l~~ 85 (544) T Consensus 3 vvIAg~~SG~GKTTvT~glm~aL~~rg~~VqpfKvGPDY-IDP~~H~~a-----------------tG~~srNLD~~mm~ 64 (451) T COG1797 3 VVIAGTSSGSGKTTVTLGLMRALRRRGLKVQPFKVGPDY-IDPGYHTAA-----------------TGRPSRNLDSWMMG 64 (451) T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CCCHHHHHH-----------------HCCCCCCCCHHHCC T ss_conf 599548888858999999999998668721665568786-381356676-----------------38856777654469 Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEEC--------CCCCCCCCCCHHHHHHH Q ss_conf 4680125899999988857775774025646024898999970788987899972--------43122212306899999 Q gi|254780195|r 86 ADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGNEDADFVICEI--------GGTIGDIEVMPFVEAIR 157 (544) Q Consensus 86 ~~niT~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~~~~Dv~ivEi--------GGTVGDIEs~pFlEAiR 157 (544) T Consensus 65 ---------------------------------~~~v~~~f~~~~~~adi~vIEGVMGLfDG~~~~~-~~gSTA~lAk-- 108 (451) T COG1797 65 ---------------------------------EEGVRALFARAAADADIAVIEGVMGLFDGRGSAT-DTGSTADLAK-- 108 (451) T ss_pred ---------------------------------HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC-CCCCHHHHHH-- T ss_conf ---------------------------------9899999998627898799961230236887776-7777999999-- Q ss_pred HHHHHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCE-----EEEECCCC-CCHHHHHHHHHHCCC Q ss_conf 999874977685799997467542256620034789999999974998768-----99923875-899999999864198 Q gi|254780195|r 158 QFGNEFSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHPDI-----LLIRADRD-IPEMERRKISLFCNV 231 (544) Q Consensus 158 Ql~~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPDi-----ivcRse~~-l~~~~k~KIalfc~V 231 (544) T Consensus 109 ----~l~~---PVvLV-------id~~~~s~S~A--Aiv~G~~~f--dp~v~iaGVIlNrVgserH~~llr~Ale~~~gv 170 (451) T COG1797 109 ----LLGA---PVVLV-------VDASGLSRSVA--AIVKGFKHF--DPDVNIAGVILNRVGSERHYELLRDALEEYTGV 170 (451) T ss_pred ----HHCC---CEEEE-------EECCCHHHHHH--HHHHHHHHC--CCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC T ss_conf ----8599---98999-------95752257899--999889861--998825789972477788999999875532798 Q ss_pred CHHHEEECCCCCCH-----HHHH--HHH----HHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH-----------CCCC Q ss_conf 86772403898620-----2668--988----764948899998387888862047899999874-----------1843 Q gi|254780195|r 232 PMSAVIPALDVDDI-----YKVP--LSY----HREGIDSVVLNAFGIENVSLPQIDNWQTFCDRT-----------LSLK 289 (544) Q Consensus 232 ~~~~Vi~~~Dv~sI-----Y~VP--l~l----~~q~l~~~I~~~L~l~~~~~~~l~~W~~~~~~~-----------~~~~ 289 (544) T Consensus 171 ~vlG~lpr~~~l~lp~RHLGLV~a~E~~~~~~~~~~~a~~v~~~vDl--------d~l~~ia~~~~~~~~~~~~~~~~~~ 242 (451) T COG1797 171 PVLGYLPRDDDLELPSRHLGLVPASERLELEAKLEALAEVVEKHVDL--------DALLEIASSAGPLEPDLSPEPERGN 242 (451) T ss_pred CEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCH--------HHHHHHHHCCCCCCCCCCCCCCCCC T ss_conf 57987427855678541326534303444899999999999860789--------8899987436888988553200168 Q ss_pred -CCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHC-CCCEEEECCCCCCC------CC Q ss_conf -43799995200148134688888888887873672416772256567234456621-69839973777865------50 Q gi|254780195|r 290 -NEVKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFY-GVHGILVPGGFGKR------GS 361 (544) Q Consensus 290 -~~V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~-~~dGIlVPGGFG~R------Gi 361 (544) T Consensus 243 ~~~~rIAVA~D-~AF~FyY~~nl~~Lr~~GA------elv~FSPL~D------~~lP~~~D~vYlgGGYPElfA~~L~~n 309 (451) T COG1797 243 PLGVRIAVARD-AAFNFYYPENLELLREAGA------ELVFFSPLAD------EELPPDVDAVYLGGGYPELFAEELSAN 309 (451) T ss_pred CCCCEEEEEEC-CHHCCCCHHHHHHHHHCCC------EEEEECCCCC------CCCCCCCCEEEECCCCHHHHHHHHHHC T ss_conf 76736999854-5100032999999997797------7998578677------779977888996897748899998447 Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCE-E Q ss_conf 168889988740476322355769999999987516889997000356666412115011234653001565546740-2 Q gi|254780195|r 362 EGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGAT-M 440 (544) Q Consensus 362 eGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGT-M 440 (544) T Consensus 310 ~~~~~~i~~~~~~G~piyaECGGlMYL-------~~~le~~~-----G~~~~M~Gvlp~------------~~~m~~Rl~ 365 (451) T COG1797 310 ESMRRAIKAFAAAGKPIYAECGGLMYL-------GESLEDAD-----GDTYEMVGVLPG------------STRMTKRLQ 365 (451) T ss_pred HHHHHHHHHHHHCCCCEEEECCCCEEE-------HHHEECCC-----CCEEEEEEEECC------------CHHHHHHHH T ss_conf 999999999987699458851551121-------01204268-----966543300033------------013543343 Q ss_pred EECCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCC Q ss_conf 31652578558706688637984766025233327889989997895999986999868999838998499972487732 Q gi|254780195|r 441 RLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELK 520 (544) Q Consensus 441 RLG~~~~~l~~~S~~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~ 520 (544) T Consensus 366 ~lGY~~~~~~~d~~~~~~G~~irGHEFHyS~~~~~~~~~~a~-------~~~~g~g-~~~~~~G~~~gnv~asY~H~H~~ 437 (451) T COG1797 366 ALGYREAEAVDDTLLLRAGEKIRGHEFHYSRLITEEDAEPAF-------RVRRGDG-IDNGRDGYRSGNVLASYLHLHFA 437 (451) T ss_pred CCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEE-------EEECCCC-CCCCCCCEEECCEEEEEEEEECC T ss_conf 166069984377634568863663210300123577675103-------5532557-66665403667767998755115 Q ss_pred CCCCCCCHHHHHHHHHH Q ss_conf 78769884158999999 Q gi|254780195|r 521 SRPLDPHPLFVSFIQAT 537 (544) Q Consensus 521 Srp~~phPLF~~fi~Aa 537 (544) T Consensus 438 s~~----~~~~~~v~~~ 450 (451) T COG1797 438 SNP----AFAARFVAAA 450 (451) T ss_pred CCH----HHHHHHHHHH T ss_conf 588----9999999731 |
|
| >pfam06418 CTP_synth_N CTP synthase N-terminus | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=1048.35 Aligned_cols=274 Identities=60% Similarity=1.055 Sum_probs=268.9 Q ss_pred CEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCC Q ss_conf 23999937501444448999999999996898288985445533488888864435078727984002556411332287 Q gi|254780195|r 2 VKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMGI 81 (544) Q Consensus 2 ~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~~ 81 (544) T Consensus 1 tkyi~vtGGV~SglGKGi~~aSig~ll~~~g~~v~~~K~DpYlNvD~Gtm~P~eHGEVfV~~DG~EtDlDlG~YERFl~~ 80 (275) T pfam06418 1 TKYIFVTGGVVSSLGKGITAASLGRLLKSRGLKVTIQKIDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFLDI 80 (275) T ss_pred CEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHCCC T ss_conf 93999959850256318999999999996796367874156312388877833156078737874014767523431477 Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCC-CCCCEEEEECCCCCCCCCCCHHHHHHHHHH Q ss_conf 4775468012589999998885777577402564602489899997078-898789997243122212306899999999 Q gi|254780195|r 82 STAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGN-EDADFVICEIGGTIGDIEVMPFVEAIRQFG 160 (544) Q Consensus 82 ~l~~~~niT~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~-~~~Dv~ivEiGGTVGDIEs~pFlEAiRQl~ 160 (544) T Consensus 81 ~l~~~~niTtGkiy~~Vi~kER~G~YLGkTVQvIPHiTdeIk~~I~~~a~~~~Di~ivEiGGTVGDIEs~pFlEAiRQl~ 160 (275) T pfam06418 81 NLTKDNNITTGKIYSSVIEKERRGDYLGKTVQVIPHITDEIKERIRRVAAKGADVVIVEIGGTVGDIESLPFLEAIRQFR 160 (275) T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCEEECCCCCHHHHHHHHHH T ss_conf 75666663401889999988755675897158778856999999998556789789997576010010228999999998 Q ss_pred HHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHEEECC Q ss_conf 87497768579999746754225662003478999999997499876899923875899999999864198867724038 Q gi|254780195|r 161 NEFSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240 (544) Q Consensus 161 ~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPDiivcRse~~l~~~~k~KIalfc~V~~~~Vi~~~ 240 (544) T Consensus 161 ~~~g~--~n~~fiHvtlvP~l~~~gE~KTKPTQhSVkeLrs~GIqPDilvcRse~~l~~~~k~KIslfcnV~~~~VI~~~ 238 (275) T pfam06418 161 LEVGR--ENVLFIHVTLVPYLKAAGELKTKPTQHSVKELRSIGIQPDILVCRSEKPLDEETKEKIALFCNVPKEAVISAP 238 (275) T ss_pred HHHCC--CCEEEEEEEECCEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHEEEEC T ss_conf 87287--7569999873244368875456732888999996489987588706789999999999876399866789846 Q ss_pred CCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHH Q ss_conf 98620266898876494889999838788886204789 Q gi|254780195|r 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNW 278 (544) Q Consensus 241 Dv~sIY~VPl~l~~q~l~~~I~~~L~l~~~~~~~l~~W 278 (544) T Consensus 239 Dv~sIY~VPl~l~~qgl~~~I~~~L~L~~-~~pdl~~W 275 (275) T pfam06418 239 DVESIYEVPLLLEKQGLDELILEKLGLDP-KEPDLSKW 275 (275) T ss_pred CCCHHHHHHHHHHHCCCHHHHHHHCCCCC-CCCCCCCC T ss_conf 84428898999998784699999759898-89997889 |
This family consists of the N-terminal region of the CTP synthase protein (EC:6.3.4.2). This family is found in conjunction with pfam00117 located in the C-terminal region of the protein. CTP synthase catalyses the synthesis of CTP from UTP by amination of the pyrimidine ring at the 4-position. |
| >cd03113 CTGs CTP synthetase (CTPs) is a two-domain protein, which consists of an N-terminal synthetase domain and C-terminal glutaminase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=994.62 Aligned_cols=253 Identities=64% Similarity=1.071 Sum_probs=249.8 Q ss_pred EEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCC Q ss_conf 39999375014444489999999999968982889854455334888888644350787279840025564113322874 Q gi|254780195|r 3 KYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMGIS 82 (544) Q Consensus 3 KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~~~ 82 (544) T Consensus 1 Kyi~VtGGV~SglGKGi~~aSig~ll~~~g~~V~~~K~DPYlNvD~GtM~P~eHGEVfV~~DG~EtDlDlG~YERFl~~~ 80 (255) T cd03113 1 KYIFVTGGVVSSLGKGITAASLGRLLKARGLKVTAQKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFLDTN 80 (255) T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCC T ss_conf 98999488201573089999999999978975889842565013899888454761778788761046664145435787 Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCC--CCCEEEEECCCCCCCCCCCHHHHHHHHHH Q ss_conf 7754680125899999988857775774025646024898999970788--98789997243122212306899999999 Q gi|254780195|r 83 TAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGNE--DADFVICEIGGTIGDIEVMPFVEAIRQFG 160 (544) Q Consensus 83 l~~~~niT~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~~--~~Dv~ivEiGGTVGDIEs~pFlEAiRQl~ 160 (544) T Consensus 81 lt~~~niTtGkiy~~VI~kER~G~YLGkTVQvIPHvTdeIk~~I~~~a~~~~~Di~ivEiGGTVGDiEs~pFlEAiRQl~ 160 (255) T cd03113 81 LSRDNNITTGKIYSSVIEKERRGDYLGKTVQVIPHITDEIKERIRRVAEKSGADVVIVEIGGTVGDIESLPFLEAIRQMK 160 (255) T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCHHHHHHHHHHHH T ss_conf 77767750528899998776446768970688787369999999986046899789997686352242207999999998 Q ss_pred HHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHEEECC Q ss_conf 87497768579999746754225662003478999999997499876899923875899999999864198867724038 Q gi|254780195|r 161 NEFSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240 (544) Q Consensus 161 ~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPDiivcRse~~l~~~~k~KIalfc~V~~~~Vi~~~ 240 (544) T Consensus 161 ~e~g~--~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lr~~GI~PDiivcRse~~l~~~~k~KIa~fc~V~~~~Vi~~~ 238 (255) T cd03113 161 LELGR--ENVLFIHVTLVPYLKAAGELKTKPTQHSVKELRSIGIQPDILVCRSEKPLPPEIREKIALFCDVPPEAVISAP 238 (255) T ss_pred HHCCC--CCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHEEECC T ss_conf 64398--7579998763002278764346642899999997589988799805786997899999985499878879867 Q ss_pred CCCCHHHHHHHHHHCCH Q ss_conf 98620266898876494 Q gi|254780195|r 241 DVDDIYKVPLSYHREGI 257 (544) Q Consensus 241 Dv~sIY~VPl~l~~q~l 257 (544) T Consensus 239 dv~sIY~vPl~l~~qgL 255 (255) T cd03113 239 DVDNIYEVPLLLEQQGL 255 (255) T ss_pred CCCCHHHHHHHHHHCCC T ss_conf 85608999999997759 |
The enzymes hydrolyze the amide bond of glutamine to ammonia and glutamate at the glutaminase domains and transfer nascent ammonia to the acceptor substrate at the synthetase domain to form an aminated product. Glutaminase domains have evolved from the same ancestor, whereas the synthetase domains are evolutionarily unrelated and have different functions. This protein family is classified based on the N-terminal synthetase domain. |
| >cd01746 GATase1_CTP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=753.88 Aligned_cols=234 Identities=59% Similarity=1.008 Sum_probs=228.3 Q ss_pred EEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHH Q ss_conf 79999520014813468888888888787367241677225656723445662169839973777865501688899887 Q gi|254780195|r 292 VKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFA 371 (544) Q Consensus 292 V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai~yA 371 (544) T Consensus 1 v~IalVGKY~~~~DaY~Si~eAL~ha~~~~~~~v~i~wi~s~~l~~~~~~~~L~~~dgilvpgGFG~rG~eGki~Ai~yA 80 (235) T cd01746 1 VRIALVGKYVELPDAYLSVLEALKHAGIALGVKLEIKWIDSEDLEEENAEEALKGADGILVPGGFGIRGVEGKILAIKYA 80 (235) T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCCCHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHH T ss_conf 97999967669833799899999998997499058999855654766889997306978957888877645889999999 Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC-CCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEEC Q ss_conf 4047632235576999999998751688999700035-666641211501123465300156554674023165257855 Q gi|254780195|r 372 RENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFS-EAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLK 450 (544) Q Consensus 372 Ren~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~-~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~ 450 (544) T Consensus 81 Ren~iPfLGIClGmQ~aviE~ARnvlg~~~A~s~E~~~~~~~~vi~~~~~~~~---------~~~~GgTmRLG~~~~~l~ 151 (235) T cd01746 81 RENNIPFLGICLGMQLAVIEFARNVLGLPDANSTEFDPDTPHPVVDLMPEQKG---------VKDLGGTMRLGAYPVILK 151 (235) T ss_pred HHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECHHHCC---------CHHCCCCEEEEEEEEEEC T ss_conf 97399725441034322689998752997767422479999877996756616---------400134134202577622 Q ss_pred CCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHH Q ss_conf 87066886379847660252333278899899978959999869998689998389984999724877327876988415 Q gi|254780195|r 451 EETLISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLF 530 (544) Q Consensus 451 ~~S~~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF 530 (544) T Consensus 152 ~~s~~~~~y~~~~i~ERHRHRYevN~~y~~~le~~Gl~~sG~~~~~~~veiiEl~~Hpffvg~QfHPEf~Srp~~phPlF 231 (235) T cd01746 152 PGTLAHKYYGKDEVEERHRHRYEVNPEYVDELEEAGLRFSGTDPDGGLVEIVELPDHPFFVGTQFHPEFKSRPLKPHPLF 231 (235) T ss_pred CCHHHHHHCCCCEEEEEECCCEEECHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCH T ss_conf 43066675188323123023556789999999868968999989999799998689984788757764468999999383 Q ss_pred HHHH Q ss_conf 8999 Q gi|254780195|r 531 VSFI 534 (544) Q Consensus 531 ~~fi 534 (544) T Consensus 232 ~~fi 235 (235) T cd01746 232 VGFV 235 (235) T ss_pred HHHC T ss_conf 6439 |
Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase (CTP). CTP is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. CTPs produce CTP from UTP and glutamine and regulate intracellular CTP levels through interactions with four ribonucleotide triphosphates. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. CTP is derived form UTP in three separate steps involving two active sites. In one active site, the UTP O4 oxygen is activated by Mg-ATP-dependent phosphorylation, followed by displacement of the resulting 4-phosphate moiety by ammonia. At a separate site, ammonia is generated via rate limiting glutamine hydrolysis (glutaminase) activity. A gated channel that spans between the glutamine hydrolysis and amidoligase active sites provides a path for ammonia diffusion. CTPs belong to th |
| >PRK06186 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=726.59 Aligned_cols=227 Identities=32% Similarity=0.507 Sum_probs=219.4 Q ss_pred CEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH Q ss_conf 37999952001481346888888888878736724167722565672344566216983997377786550168889988 Q gi|254780195|r 291 EVKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKF 370 (544) Q Consensus 291 ~V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai~y 370 (544) T Consensus 1 tv~IaiVGKY~~l~DaY~Sv~eAL~ha~~~~~~~v~i~wI~se~~~~~---~~L~~~dgilv~pGfG~RG~eGki~Ai~y 77 (229) T PRK06186 1 TLRIALVGDYNPDITAHQAIPLALDLAAEVLGLPVDYEWLPTDDIHDP---EDLAGFDGIWCVPGSPYRNEDGALTAIRF 77 (229) T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC---CHHCCCCEEEECCCCCCCCHHHHHHHHHH T ss_conf 929999989779840898699999987997099068999720116771---02225998998998777656389999999 Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC-CCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEE Q ss_conf 74047632235576999999998751688999700035-66664121150112346530015655467402316525785 Q gi|254780195|r 371 ARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFS-EAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSL 449 (544) Q Consensus 371 ARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~-~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l 449 (544) T Consensus 78 ARen~iP~LGICLGmQ~avIEfARnvlgl~dAnS~Efd~~~~~pvi~~l------------------~~~~~~~~~~~~l 139 (229) T PRK06186 78 ARENGIPFLGTCGGFQHALLEYARNVLGWADAEHAETDPEASRPVIAPL------------------SCSLVEATAAIRL 139 (229) T ss_pred HHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECC------------------CCCHHCCCCCEEE T ss_conf 9876998786427789999999998659988876455789997189368------------------8732038751574 Q ss_pred CCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHH Q ss_conf 58706688637984766025233327889989997895999986999868999838998499972487732787698841 Q gi|254780195|r 450 KEETLISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPL 529 (544) Q Consensus 450 ~~~S~~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPL 529 (544) T Consensus 140 ~~~s~~~~iYg~~~i~ERHRHRYEvN~~y~~~le~~Gl~~sG~~~~~~-veiiEl~~Hpffvg~QfHPEf~Srp~~phPl 218 (229) T PRK06186 140 RPGSLIARAYGTDEIEEGYHCRYGVNPEFAAALESGALRVSGWDEEGD-VRAVELPGHPFFVATLFQPERAALAGRLPPL 218 (229) T ss_pred CCCCHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCC-EEEEEECCCCCEEEECCCCCCCCCCCCCCCC T ss_conf 899839998696530133234554698999999978989999889998-8999928998589965875456899998815 Q ss_pred HHHHHHHHHH Q ss_conf 5899999998 Q gi|254780195|r 530 FVSFIQATVL 539 (544) Q Consensus 530 F~~fi~Aal~ 539 (544) T Consensus 219 F~~Fi~AA~a 228 (229) T PRK06186 219 VRAFLRACSA 228 (229) T ss_pred HHHHHHHHHC T ss_conf 9999999852 |
|
| >pfam07722 Peptidase_C26 Peptidase C26 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-24 Score=194.17 Aligned_cols=179 Identities=27% Similarity=0.325 Sum_probs=121.5 Q ss_pred CCCHHHH--HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCC--------CCCC------C---- Q ss_conf 4813468--888888888787367241677225656723445662169839973777--------8655------0---- Q gi|254780195|r 302 HLKDAYR--SLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGF--------GKRG------S---- 361 (544) Q Consensus 302 ~l~DaY~--Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGF--------G~RG------i---- 361 (544) T Consensus 19 ~~~~~yi~~~Yv~~i~~aG----g~pv~iP~~~~---~~~~~~~l~~~dGlll~GG~~di~P~~yg~~~~~~~~~~~~~R 91 (219) T pfam07722 19 AAGASYIAASYVKAVEGAG----GLPVLLPILED---PEDLEALLDLVDGLLLTGGQSNVDPSLYGEEPSPSGGYYDPAR 91 (219) T ss_pred CCHHHHHHHHHHHHHHHCC----CEEEEECCCCC---HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHH T ss_conf 1048888589999999859----99999789999---8999999976798998598876782214677686678757888 Q ss_pred -HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEE Q ss_conf -1688899887404763223557699999999875168899970003566664121150112346530015655467402 Q gi|254780195|r 362 -EGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATM 440 (544) Q Consensus 362 -eGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTM 440 (544) T Consensus 92 d~~e~~l~~~a~~~~~PilGICrG~Qllnv~~GGtL~--q~i~-------------~~~~~~~~~---------~~~~~~ 147 (219) T pfam07722 92 DAFELALIRAALERGKPILGICRGMQLLNVALGGTLY--QDIP-------------EHPGNSDHH---------HQLAVQ 147 (219) T ss_pred HHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCC--CCCC-------------CCCCCCCCC---------CCCCCC T ss_conf 9999999999987699879976508999999678300--0230-------------125754456---------688764 Q ss_pred EECCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCC-EEEEEECCCC Q ss_conf 31652578558706688637984766025233327889989997895999986999868999838998-4999724877 Q gi|254780195|r 441 RLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHP-WFIGVQYHPE 518 (544) Q Consensus 441 RLG~~~~~l~~~S~~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~Hp-ffvgvQfHPE 518 (544) T Consensus 148 ~~~~h~v~i~~~s~l~~~~~~~~~~vnS~Hhq~I~~------l~~~l~v~A~a~Dg-~iEaie~~~~~~f~~GVQwHPE 219 (219) T pfam07722 148 YAPSHAVSLEPGSLLARLLGAEEILVNSLHHQAIKR------LAPGLRVEATAPDG-TIEAIESPNAPYFVLGVQWHPE 219 (219) T ss_pred CCCCEEEEECCCCHHHHHHCCCCEEEECCHHHHHHC------CCCCCEEEEEECCC-CEEEEEECCCCCCEEEEEECCC T ss_conf 256038997789739987299845797450657740------48985899994899-7899996699986799972889 |
These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C terminus. |
| >pfam00117 GATase Glutamine amidotransferase class-I | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.6e-21 Score=172.53 Aligned_cols=181 Identities=28% Similarity=0.408 Sum_probs=132.0 Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCC-CHHHHHHHHHHHCCCCCHHHH Q ss_conf 8134688888888887873672416772256567234456621698399737778655-016888998874047632235 Q gi|254780195|r 303 LKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG-SEGKIAAIKFARENKIPFLGI 381 (544) Q Consensus 303 l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RG-ieGkI~Ai~yARen~iP~LGI 381 (544) T Consensus 2 iiD~~dsft~~i~~~l~~~g~~~~v~~~~~~~~---~-~~~~~~~d~iilspGpg~p~~~~~~~~~i~~~~~~~~PiLGI 77 (187) T pfam00117 2 LIDNGDSFTYNLARALRELGVEVEVVPNDTPAE---E-ILELLNPDGIIISPGPGSPGDAGGAIEAIKELRENKIPILGI 77 (187) T ss_pred EEECCCCHHHHHHHHHHHCCCEEEEEECCCCHH---H-HHHHCCCCEEEECCCCCCHHHCCCHHHHHHHHHHCCCCEEEE T ss_conf 893786389999999986899799998999869---9-985259998999199861101345899999999779989999 Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHC- Q ss_conf 5769999999987516889997000356666412115011234653001565546740231652578558706688637- Q gi|254780195|r 382 CFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYG- 460 (544) Q Consensus 382 ClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg- 460 (544) T Consensus 78 ClG~Qll~~~~Gg~v~~~--------------------------------~~~~~G~~~~i~~-------~~~--~~~~~ 116 (187) T pfam00117 78 CLGHQLLALAFGGKVIKA--------------------------------KEPHHGKNSPVGH-------DKG--LFYGL 116 (187) T ss_pred EHHHHHHHHHCCCCCCCC--------------------------------CEEECCEEEEECC-------CHH--HHCCC T ss_conf 888999999719986443--------------------------------1010570489732-------116--44279 Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHH Q ss_conf 98476602523332788998999789599998699986899983899849997248773278769884158999 Q gi|254780195|r 461 LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFI 534 (544) Q Consensus 461 ~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi 534 (544) T Consensus 117 ~~~~~~~~~Hs~~v~~~~----lp~~~~i~a~s~~~~~i~a~~~~~~~~~-gvQfHPE~~~t~~G~~-ll~nfl 184 (187) T pfam00117 117 PNVFIVRRYHSYAVDPDT----LPDGLEVTAASDNGGEIMAIRHKENPIF-GVQFHPESSLTPGGPE-LLFNFL 184 (187) T ss_pred CCCCEEEEEEEEEEEECC----CCCCEEEEEECCCCCCEEEEEECCCCEE-EEEECCCCCCCCCCHH-HHHHHH T ss_conf 977377760348998625----7886299998688871899998899899-9995997799977048-998777 |
|
| >PRK00758 GMP synthase subunit A; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.8e-16 Score=135.21 Aligned_cols=176 Identities=20% Similarity=0.205 Sum_probs=108.9 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH Q ss_conf 34688888888887873672416772256567234456621698399737778655016888998874047632235576 Q gi|254780195|r 305 DAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLGICFG 384 (544) Q Consensus 305 DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai~yARen~iP~LGIClG 384 (544) T Consensus 6 D~~dsft~ni~~~l~~~g~~v~v~~~~------~~~~~i~~~~dgiilS~GP~~---~~~~~~~~~i~~~~iPiLGIClG 76 (184) T PRK00758 6 NNGGQYNHLIHRTLRYLGVDAKIIPNT------TPLEEIKAEPDGIILSGGPEI---ERAGNCEEYLLELDVPILGICLG 76 (184) T ss_pred ECCCHHHHHHHHHHHHCCCEEEEEECC------CCHHHHHHCCCEEEECCCCCC---CCCCCHHHHHHHCCCCEEEEEHH T ss_conf 898638999999999789928999598------989999638998998899983---33220699998659988997177 Q ss_pred HHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHH-HHCCCE Q ss_conf 9999999987516889997000356666412115011234653001565546740231652578558706688-637984 Q gi|254780195|r 385 MQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISR-IYGLDL 463 (544) Q Consensus 385 mQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~-iYg~~~ 463 (544) T Consensus 77 ~Q~l~~~~Gg~v~-----------~~~~---------------------------~~~G~~~i~~~~~~~lf~~~~~~~~ 118 (184) T PRK00758 77 HQLIAKAFGGEVG-----------RAEK---------------------------GEYALVEVEILDEDDILRGLPPEIT 118 (184) T ss_pred HHHHHHHCCCCCC-----------CCCC---------------------------EEECCEEEEEECCCCCCCCCCCCCE T ss_conf 6665876699330-----------2762---------------------------1543368999738875111588637 Q ss_pred EEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 766025233327889989997895999986999868999838998499972487732787698841589999999 Q gi|254780195|r 464 IPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATV 538 (544) Q Consensus 464 I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aal 538 (544) T Consensus 119 v~--~~H~~~v~~-----~-p~~~~v~a~s~~~~-v~~i~~~~~~i~-gvQFHPEs~~t~-~G~~ll~nFl~icg 182 (184) T PRK00758 119 VW--ASHADEVKE-----L-PDGFEILARSDICE-VEAMKHKDKPIY-GVQFHPEVSHTE-KGEEIFKNFIKICG 182 (184) T ss_pred EE--EEEEEEEEE-----C-CCCEEEEEECCCCC-EEEEEECCCCEE-EEEECCCCCCCC-CHHHHHHHHHHHHC T ss_conf 87--640058996-----5-87159999849998-899998999999-999188479992-78999999999855 |
|
| >PRK13147 consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.2e-15 Score=131.58 Aligned_cols=187 Identities=21% Similarity=0.260 Sum_probs=105.7 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECC-C-CCC--CCC---HHHHHHHHHHHCCCCCHH Q ss_conf 688888888887873672416772256567234456621698399737-7-786--550---168889988740476322 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPG-G-FGK--RGS---EGKIAAIKFARENKIPFL 379 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPG-G-FG~--RGi---eGkI~Ai~yARen~iP~L 379 (544) T Consensus 13 i~Sv~~al~~~~~~~gl~~~~~i~~-------~-~~~i~~~d~lILPGVGsF~~~m~~L~~~~~l~~~i~~~~~~~~piL 84 (211) T PRK13147 13 LASAARALEKAATRKGIDATVVISA-------D-PTDVRNADRIVLPGQGAFADCAQGLAAIPGLRNAIETATAAGTPFL 84 (211) T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEC-------C-HHHHHHCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEE T ss_conf 9999999998875358884399969-------9-9999649978989866489999998863585999999997699879 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHH-HH- Q ss_conf 3557699999999875168899970003566664121150112346530015655467402316525785587066-88- Q gi|254780195|r 380 GICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLI-SR- 457 (544) Q Consensus 380 GIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~-~~- 457 (544) T Consensus 85 GICLGMQlL~------------~~s~E~g~~~--GLgli~G~v~kl~-~~~~kvPhiGW------n~i~~~~~~~~~~~~ 143 (211) T PRK13147 85 GICVGMQLMA------------ERGLEHERTP--GFGWISGEIARMD-APGLRLPHMGW------NTLDFTPGAHPLTDG 143 (211) T ss_pred EECHHHHHHC------------CCCCCCCCCC--CEEEEEEEEEECC-CCCCCCCEECE------EEEECCCCCCHHHCC T ss_conf 9836757521------------6465379877--4007702899898-76788876252------688705786643247 Q ss_pred HHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH Q ss_conf 637984766025233327889989997895999986999868999838998499972487732787698841589999 Q gi|254780195|r 458 IYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544) Q Consensus 458 iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544) T Consensus 144 ~~~~~~f--YFvHSY~~~~------~~~~~~~~~~~yg~~~~s~v~k~N---i~G~QFHPE-KS~~-~Gl~ll~nFlk 208 (211) T PRK13147 144 LIPGDHG--YFVHSYALRD------GADSDLVATTQYGGQVPAIVARGN---RAGTQFHVE-KSQE-VGLTILGNFLR 208 (211) T ss_pred CCCCCEE--EEECCCCCCC------CCCCCEEEEEECCCEEEEEEEECC---EEEEECCCH-HCCH-HHHHHHHHHHC T ss_conf 6768869--9961234068------888768999989998999999899---999968800-1468-68999999867 |
|
| >cd01742 GATase1_GMP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.3e-15 Score=131.39 Aligned_cols=169 Identities=19% Similarity=0.247 Sum_probs=100.4 Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH Q ss_conf 88888888887873672416772256567234456621698399737778655016888998874047632235576999 Q gi|254780195|r 308 RSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLGICFGMQM 387 (544) Q Consensus 308 ~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai~yARen~iP~LGIClGmQ~ 387 (544) T Consensus 12 ~si~~~l~----~~G~~~~vv~~~~~-~~----~~~~~~~dgvils~GP~~~~~~~~~~~~~~i~~~~~PilGIClG~Ql 82 (181) T cd01742 12 HLIARRVR----ELGVYSEILPNTTP-LE----EIKLKNPKGIILSGGPSSVYEEDAPRVDPEIFELGVPVLGICYGMQL 82 (181) T ss_pred HHHHHHHH----HCCCEEEEEECCCC-HH----HHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHH T ss_conf 99999999----77994999969999-89----99734989899899999855579833309998479999998599999 Q ss_pred HHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHH-HHCCCEEEE Q ss_conf 9999987516889997000356666412115011234653001565546740231652578558706688-637984766 Q gi|254780195|r 388 AVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISR-IYGLDLIPE 466 (544) Q Consensus 388 avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~-iYg~~~I~E 466 (544) T Consensus 83 l~~a-----~Gg~------v~~~~---------------------------~~~~G~~~~~~~~~~~l~~~~~~~~~~-- 122 (181) T cd01742 83 IAKA-----LGGK------VERGD---------------------------KREYGKAEIEIDDSSPLFEGLPDEQTV-- 122 (181) T ss_pred HHHH-----CCCC------EEECC---------------------------CCEECCEEEEEECCCCCCCCCCCCEEE-- T ss_conf 9987-----5976------02189---------------------------855364478981262100588985678-- Q ss_pred ECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHH Q ss_conf 02523332788998999789599998699986899983899849997248773278769884158999 Q gi|254780195|r 467 RHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFI 534 (544) Q Consensus 467 RHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi 534 (544) T Consensus 123 ~~~H~~~v~~------~p~~~~~~a~s~~~-~v~~~~~~~~~i~-gvQfHPEs~~s~-~G~~il~NFl 181 (181) T cd01742 123 WMSHGDEVVK------LPEGFKVIASSDNC-PVAAIANEEKKIY-GVQFHPEVTHTE-KGKEILKNFL 181 (181) T ss_pred EEECCEEEEE------CCCCEEEEEECCCC-EEEEEEECCCCEE-EEEECCCCCCCC-CHHHHHHHHC T ss_conf 8563629984------58730799995994-0999998999989-999578889984-7379998429 |
Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase. GMP synthetase is a glutamine amidotransferase from the de novo purine biosynthetic pathway. Glutamine amidotransferase (GATase) activity catalyse the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. GMP synthetase catalyses the amination of the nucleotide precursor xanthosine 5'-monophospahte to form GMP. GMP synthetase belongs to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. |
| >PRK13141 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=4e-15 Score=129.67 Aligned_cols=183 Identities=22% Similarity=0.374 Sum_probs=103.4 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECC-C-CCC--CCC--HHHHHHHHHHHCCCCCHHH Q ss_conf 688888888887873672416772256567234456621698399737-7-786--550--1688899887404763223 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPG-G-FGK--RGS--EGKIAAIKFARENKIPFLG 380 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPG-G-FG~--RGi--eGkI~Ai~yARen~iP~LG 380 (544) T Consensus 13 i~si~~al~~lG~----~~~i--i~-------~-~~~l~~~d~lIlPGvGsf~~~~~~L~~~~l~~~i~~~~~~~~PiLG 78 (204) T PRK13141 13 LHSVSKALERLGA----EAII--TS-------D-PEEILAADAVILPGVGAFPDAMQNLRERGLVEVIKEAVASGKPLLG 78 (204) T ss_pred HHHHHHHHHHCCC----CEEE--EC-------C-HHHHHHCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEE T ss_conf 9999999998699----8999--79-------9-9998408989986887505687764653929999999865996897 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHH-HH Q ss_conf 55769999999987516889997000356666412115011234653001565546740231652578558706688-63 Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISR-IY 459 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~-iY 459 (544) T Consensus 79 IClGmQlL~------------~~s~E~g~~~G--Lgl~~g~v~~~~~~~~~~vPhi------Gw~~i~~~~~~~l~~~~~ 138 (204) T PRK13141 79 ICLGMQLLF------------ESSEEFGDTEG--LGLLPGKVRRFPPGEGLKVPHM------GWNQLEFTRPSPLLAGLP 138 (204) T ss_pred EHHHHHHHH------------HCCCCCCCCCC--CCEEEEEEEECCCCCCCCCCCC------CCEEEEECCCCHHHHCCC T ss_conf 549899973------------01310466466--5436689997788888856510------305776113780541677 Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH Q ss_conf 79847660252333278899899978959999869998689998389984999724877327876988415899999 Q gi|254780195|r 460 GLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQA 536 (544) Q Consensus 460 g~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~A 536 (544) T Consensus 139 ~~~~~y--f~HSy~v~~~------~~~~~~a~~~~g~~i~a~i~~~n---i~G~QFHPE-kS~~-~G~~ilknFl~l 202 (204) T PRK13141 139 EGAYVY--FVHSYYADPP------DEEVVAATCDYGQKFPAAVAKDN---LFGVQFHPE-KSGD-IGLKILKNFLEM 202 (204) T ss_pred CCCCEE--EEECCEEECC------CCCCEEEEECCCCEEEEEEECCC---EEEEECCCC-CCCH-HHHHHHHHHHHH T ss_conf 777237--8624278338------97528999559988999997199---999988985-1485-279999999997 |
|
| >PRK13143 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.2e-15 Score=131.49 Aligned_cols=181 Identities=24% Similarity=0.330 Sum_probs=100.0 Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC--CC--CCCCHHHHHHHHHHHCCCCCHHHHHH Q ss_conf 888888888878736724167722565672344566216983997377--78--65501688899887404763223557 Q gi|254780195|r 308 RSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG--FG--KRGSEGKIAAIKFARENKIPFLGICF 383 (544) Q Consensus 308 ~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG--FG--~RGieGkI~Ai~yARen~iP~LGICl 383 (544) T Consensus 15 ~si~~~l~~lg----~~~~i~~---------~-~~~l~~~d~iILPGvG~~~~~~~~l~~~~~~i~~~~~~~~PiLGICl 80 (201) T PRK13143 15 RSVSKGLERAG----ADVEITS---------D-PEEILSADGIVLPGVGAFGDVMENLGPLKETINEAVDDGKPFLGICL 80 (201) T ss_pred HHHHHHHHHCC----CEEEECC---------C-HHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEH T ss_conf 99999999869----8599928---------9-99984379679738881889998765157999999986998799808 Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHC-CC Q ss_conf 69999999987516889997000356666412115011234653001565546740231652578558706688637-98 Q gi|254780195|r 384 GMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYG-LD 462 (544) Q Consensus 384 GmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg-~~ 462 (544) T Consensus 81 GmQll~~------------~s~E~~~~~--GLg~~~g~v~~~--~~~~~ip~~------G~~~i~~~~~~~l~~~i~~~~ 138 (201) T PRK13143 81 GMQMLFE------------SSEEGGLTK--GLGLIPGRVVRF--PPGVKVPHM------GWNTVNIVKDCPLFEGIKDGE 138 (201) T ss_pred HHHHHHH------------HCCCCCCCC--CCEEECCEEEEC--CCCCCCCCC------CCEEEEEECCCHHHCCCCCCC T ss_conf 9865534------------140267644--536863389973--654446634------426876532680122866554 Q ss_pred EEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 476602523332788998999789599998699986899983899849997248773278769884158999999 Q gi|254780195|r 463 LIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQAT 537 (544) Q Consensus 463 ~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aa 537 (544) T Consensus 139 ~~y--f~Hs~~~~~~------~~~~~~~~t~~~~~~~a~i~~~n---i~GvQFHPE-ks~~-~G~~ilknF~~~~ 200 (201) T PRK13143 139 YFY--FVHSYYADPD------DPDVIVATTDYGIEFPAVVCKGN---VFGTQFHPE-KSGE-TGLKILENFVELI 200 (201) T ss_pred EEE--EEEEEEEEEC------CCCCEEEEECCCCEEEEEEECCC---EEEEECCCC-CCCC-CHHHHHHHHHHHH T ss_conf 799--9714489827------98626899619980899993898---999918982-3672-5599999999986 |
|
| >cd01744 GATase1_CPSase Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.8e-15 Score=128.02 Aligned_cols=161 Identities=24% Similarity=0.373 Sum_probs=101.7 Q ss_pred HHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCC-CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 8787367241677225656723445662169839973777865-501688899887404763223557699999999875 Q gi|254780195|r 317 SGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKR-GSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARN 395 (544) Q Consensus 317 A~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~R-GieGkI~Ai~yARen~iP~LGIClGmQ~avIEfARn 395 (544) T Consensus 15 ~lrelg~~~~v~~~~~-~~~~---i~-~~~p~giIlS~GPg~p~~~~~~~~~~~~~~~~~iPILGIClG~Q~ia~~~Gg~ 89 (178) T cd01744 15 ELLKRGCEVTVVPYNT-DAEE---IL-KLDPDGIFLSNGPGDPALLDEAIKTVRKLLGKKIPIFGICLGHQLLALALGAK 89 (178) T ss_pred HHHHCCCEEEEEECCC-CHHH---HH-HCCCCEEEECCCCCCHHHHCCHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCC T ss_conf 9998799799993989-9999---98-41999799899999957734449999999746998899812178899881983 Q ss_pred CCCCCCCCHHHCCC--CCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEEEEECCCCCC Q ss_conf 16889997000356--6664121150112346530015655467402316525785587066886379847660252333 Q gi|254780195|r 396 LAGIPNACSTEFSE--AGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYE 473 (544) Q Consensus 396 vlgl~dAnStEf~~--~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I~ERHRHRYE 473 (544) T Consensus 90 v~k~~------~g~~G~n~pv~~~---------------------------------~~~~---~----~~~-~~~H~~~ 122 (178) T cd01744 90 TYKMK------FGHRGSNHPVKDL---------------------------------ITGR---V----YIT-SQNHGYA 122 (178) T ss_pred CCCCC------CCCCCCCCCCEEC---------------------------------CCCC---E----EEE-ECCCCEE T ss_conf 00156------6724787121676---------------------------------8883---8----886-4475548 Q ss_pred CCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHH Q ss_conf 2788998999789599998699986899983899849997248773278769884158999 Q gi|254780195|r 474 VNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFI 534 (544) Q Consensus 474 vN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi 534 (544) T Consensus 123 v~~~~----lp~~~~v~a~s~~d~~i~ai~h~~~~i~-GVQFHPEs~~~~~~~~~if~nFl 178 (178) T cd01744 123 VDPDS----LPGGLEVTHVNLNDGTVEGIRHKDLPVF-SVQFHPEASPGPHDTEYLFDEFL 178 (178) T ss_pred EEECC----CCCCCEEEEECCCCCCEEEEEECCCCEE-EEEECCCCCCCCCCCHHHHHHHC T ss_conf 76245----8998579996489985799998999999-99859979999977489897239 |
This group of sequences represents the small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II. CPSase II catalyzes the production of carbomyl phosphate (CP) from bicarbonate, glutamine and two molecules of MgATP. The reaction is believed to proceed by a series of four biochemical reactions involving a minimum of three discrete highly reactive intermediates. The synthesis of CP is critical for the initiation of two separate biosynthetic pathways. In one CP is coupled to aspartate, its carbon and nitrogen nuclei ultimately incorporated into the aromatic moieties of pyrimidine nucleotides. In the second pathway CP is condensed with ornithine at the start of the urea cycle and is utilized for the detoxification of ammonia and biosynthesis of arginine. CPSases may be encoded by one or by several genes, depending on the species. The E.coli enzyme is |
| >cd01748 GATase1_IGP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS) | Back alignment and domain information |
|---|
Probab=99.60 E-value=3e-15 Score=130.62 Aligned_cols=180 Identities=26% Similarity=0.390 Sum_probs=98.5 Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECC-C-CCC--CCCH--HHHHHHHHHHCCCCCHHHH Q ss_conf 88888888887873672416772256567234456621698399737-7-786--5501--6888998874047632235 Q gi|254780195|r 308 RSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPG-G-FGK--RGSE--GKIAAIKFARENKIPFLGI 381 (544) Q Consensus 308 ~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPG-G-FG~--RGie--GkI~Ai~yARen~iP~LGI 381 (544) T Consensus 12 ~si~~~l~~lg~------~~~ii~-------~-~~~l~~~d~iIlPGvG~f~~~~~~l~~~~~~~~i~~~~~~~~PiLGI 77 (198) T cd01748 12 RSVANALERLGA------EVIITS-------D-PEEILSADKLILPGVGAFGDAMANLRERGLIEALKEAIASGKPFLGI 77 (198) T ss_pred HHHHHHHHHCCC------CEEEEC-------C-HHHHHHCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCEEEE T ss_conf 999999998799------299979-------9-99983089899878874034444410038199999998769968999 Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHH-HHC Q ss_conf 5769999999987516889997000356666412115011234653001565546740231652578558706688-637 Q gi|254780195|r 382 CFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISR-IYG 460 (544) Q Consensus 382 ClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~-iYg 460 (544) T Consensus 78 ClG~QlL~------------~~s~E~~~~~g--Lg~~~g~V~~~~~~~~~~iP------~iGwn~i~~~~~~~~~~~~~~ 137 (198) T cd01748 78 CLGMQLLF------------ESSEEGGGTKG--LGLIPGKVVRFPASEGLKVP------HMGWNQLEITKESPLFKGIPD 137 (198) T ss_pred EEEEEEEE------------EEEECCCCCCC--CCCCCEEEEECCCCCCCCCC------CCCEEEEECCCCCCHHCCCCC T ss_conf 81145466------------67650686355--36554099988777788664------112246750336803207776 Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHH Q ss_conf 98476602523332788998999789599998699986899983899849997248773278769884158999 Q gi|254780195|r 461 LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFI 534 (544) Q Consensus 461 ~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi 534 (544) T Consensus 138 ~~~~y--F~HS~~v~~------~~~~~~~a~~~~~~~~~a~i~~~n---i~GvQFHPE-kS~~-~G~~ll~nFl 198 (198) T cd01748 138 GSYFY--FVHSYYAPP------DDPDYILATTDYGGKFPAAVEKDN---IFGTQFHPE-KSGK-AGLKLLKNFL 198 (198) T ss_pred CCEEE--EEECCEEEC------CCCCEEEEEECCCCEEEEEEECCC---EEEEECCCC-CCCH-HHHHHHHHHC T ss_conf 75358--862417752------897506889759983999998799---999978985-2476-0899999539 |
Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS). IGPS incorporates ammonia derived from glutamine into N1-[(5'-phosphoribulosyl)-formimino]-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to form 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR) and imidazole glycerol phosphate (IGP). The glutamine amidotransferase domain generates the ammonia nucleophile which is channeled from the glutaminase active site to the PRFAR active site. IGPS belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. |
| >PRK05670 anthranilate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.3e-14 Score=124.21 Aligned_cols=185 Identities=21% Similarity=0.220 Sum_probs=104.2 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH Q ss_conf 34688888888887873672416772256567234456621698399737778655016888998874047632235576 Q gi|254780195|r 305 DAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLGICFG 384 (544) Q Consensus 305 DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai~yARen~iP~LGIClG 384 (544) T Consensus 6 D~~dsfT~nI~~~lr~~g~~v~V~~~d~~~~~--~-i~-~~~pdgiiLS~GPg~P~~~~~~~~~i~~~~~~iPiLGIClG 81 (192) T PRK05670 6 DNYDSFTYNLVQYLGELGAEVVVYRNDEITLE--E-IE-ALAPDAIVLSPGPGTPAEAGISLELIREFAGKVPILGVCLG 81 (192) T ss_pred ECCCCHHHHHHHHHHHCCCEEEEEECCCCCHH--H-HH-HCCCCEEEECCCCCCHHHCCCHHHHHHHHCCCCCEEEEEHH T ss_conf 68986899999999868996999989989999--9-98-50989899999999936605549999973469978998477 Q ss_pred HHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEE Q ss_conf 99999999875168899970003566664121150112346530015655467402316525785587066886379847 Q gi|254780195|r 385 MQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLI 464 (544) Q Consensus 385 mQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I 464 (544) T Consensus 82 ~Qlia~~~Gg~v~-------------------~~~~-------------~~hG~~-----~~i~~~~~~lf~~~~~~~~v 124 (192) T PRK05670 82 HQAIGEAFGGKVV-------------------RAKE-------------IMHGKT-----SPIEHDGKGIFAGLPNPFTV 124 (192) T ss_pred HHHHHHHCCCEEE-------------------ECCC-------------CCCCEE-----EEEEECCCCCCCCCCCCCEE T ss_conf 8999987197388-------------------8886-------------363704-----89998999871588887468 Q ss_pred EEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 660252333278899899978959999869998689998389984999724877327876988415899999998 Q gi|254780195|r 465 PERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVL 539 (544) Q Consensus 465 ~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aal~ 539 (544) T Consensus 125 ~-~-~Hs~~v~~~~l----p~~~~v~a~s~d~-~i~a~~~~~~~~~-gvQFHPEs~~t-~~G~~il~nFl~~~~g 190 (192) T PRK05670 125 T-R-YHSLVVERESL----PDCLEVTAWTDDG-EIMGVRHKELPIY-GVQFHPESILT-EHGHKLLENFLELALG 190 (192) T ss_pred E-E-CCEEEEEECCC----CCCEEEEEEECCC-CEEEEEECCCCEE-EEEECCCCCCC-CCHHHHHHHHHHHHCC T ss_conf 6-1-12079993347----9967999997997-1999998999989-99679988998-1769999999997513 |
|
| >PRK13176 consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=3e-14 Score=123.41 Aligned_cols=190 Identities=19% Similarity=0.279 Sum_probs=105.6 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC--CCC--CCC---HHHHHHHH-HHHCCCCCH Q ss_conf 6888888888878736724167722565672344566216983997377--786--550---16888998-874047632 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG--FGK--RGS---EGKIAAIK-FARENKIPF 378 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG--FG~--RGi---eGkI~Ai~-yARen~iP~ 378 (544) T Consensus 13 i~Sv~~al~~~g~~~~i~~~i~~~~-------~-~~~~~~~~~lILPGVGsf~~~m~~L~~~~g~~~~i~~~~~~~~~pi 84 (216) T PRK13176 13 LHSATKAFERAAREAGIAAEIDVTS-------D-PDRVARADRIVLPGVGAFADCRRGLDAVDGMVEALTEAVEKKARPF 84 (216) T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEC-------C-HHHHHCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCE T ss_conf 9999999999876438896099978-------9-9998379979989987789999987762772899999999769957 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCC-CCCCCCCCCCCCCCEEEECCEEEEECCCCHHHH Q ss_conf 2355769999999987516889997000356666412115011234-653001565546740231652578558706688 Q gi|254780195|r 379 LGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKG-DQQEKRLPSDDLGATMRLGAYDVSLKEETLISR 457 (544) Q Consensus 379 LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~-~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~ 457 (544) T Consensus 85 LGIClGmQlL~------------~~s~E~~~~~--GLgli~G~V~kl~~~~~~~kvPh~GW------n~v~~~~~~~~~~ 144 (216) T PRK13176 85 LGICVGMQLMA------------TRGLEKTVTD--GLGWIAGDVVEITPSDPSLKIPHMGW------NTLDVKRPHPVFD 144 (216) T ss_pred EEEEHHHEEHH------------HCCCCCCCCC--CEEEEEEEEEECCCCCCCCCCCEECH------HHEEECCCCHHHC T ss_conf 99853121265------------3686788867--33067249999478886764864167------7868678867773 Q ss_pred HHC--CCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH Q ss_conf 637--984766025233327889989997895999986999868999838998499972487732787698841589999 Q gi|254780195|r 458 IYG--LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544) Q Consensus 458 iYg--~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544) T Consensus 145 ~i~~~~~~~~fYFvHSY~~~~~~------~~~~~a~t~yg~~f~a~v~k~N---i~G~QFHPE-KS~~-~Gl~ll~nFl~ 213 (216) T PRK13176 145 GIPTGDKGLHAYFVHSYHLAAAN------EADVLAHADYGGPVTAIVGRDT---MVGTQFHPE-KSQR-LGLALIANFLK 213 (216) T ss_pred CCCCCCCCCEEEEEEEEEEECCC------CCCEEEEEECCCEEEEEEEECC---EEEECCCCC-CCCH-HHHHHHHHHHC T ss_conf 87778887358999756760488------4779999975998999998399---999909931-0278-49999999856 |
|
| >cd01743 GATase1_Anthranilate_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.6e-14 Score=122.02 Aligned_cols=181 Identities=20% Similarity=0.190 Sum_probs=102.9 Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHH Q ss_conf 14813468888888888787367241677225656723445662169839973777865501688899887404763223 Q gi|254780195|r 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLG 380 (544) Q Consensus 301 ~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai~yARen~iP~LG 380 (544) T Consensus 4 iD~~dsft~~---i~r~lr~~g~~~~v~p~~~~~~~----~~~~~~~~giiLS~GPg~p~~~~~~~~~~~~l~~~iPiLG 76 (184) T cd01743 4 IDNYDSFTYN---LVQYLRELGAEVVVVRNDEITLE----ELELLNPDAIVISPGPGHPEDAGISLEIIRALAGKVPILG 76 (184) T ss_pred EECCCCHHHH---HHHHHHHCCCEEEEEECCCCCHH----HHHHCCCCEEEECCCCCCHHHCCCHHHHHHHHHCCCCEEE T ss_conf 9379817999---99999867995999989999999----9973297999999999892561460999999846998999 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHC Q ss_conf 55769999999987516889997000356666412115011234653001565546740231652578558706688637 Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYG 460 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg 460 (544) T Consensus 77 IC~G~Qll~~~~Gg~v~-------------------~~~-------------~~~~G~-----~~~i~~~~~~~~~~~~~ 119 (184) T cd01743 77 VCLGHQAIAEAFGGKVV-------------------RAP-------------EPMHGK-----TSEIHHDGSGLFKGLPQ 119 (184) T ss_pred ECHHHHHHHHHCCCEEE-------------------ECC-------------CCEECE-----EEEEEECCCCCEECCCC T ss_conf 80999999998398487-------------------457-------------514054-----58999779763642788 Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHH Q ss_conf 98476602523332788998999789599998699986899983899849997248773278769884158999 Q gi|254780195|r 461 LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFI 534 (544) Q Consensus 461 ~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi 534 (544) T Consensus 120 ~~~v~~--~Hs~~~~~~~----~~~~~~~~a~~~~~-~i~ai~~~~~~i~-GvQFHPEs~~t~-~G~~il~nFl 184 (184) T cd01743 120 PFTVGR--YHSLVVDPDP----LPDLLEVTASTEDG-VIMALRHRDLPIY-GVQFHPESILTE-YGLRLLENFL 184 (184) T ss_pred CCEEEE--EEEEEEECCC----CCCCCEEEEECCCC-CEEEEEECCCCEE-EEEECCCCCCCC-CHHHHHHHHC T ss_conf 888988--6146898135----78750799988998-4999998999989-998368768982-7389998439 |
Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase (ASase). This group contains proteins similar to para-aminobenzoate (PABA) synthase and ASase. These enzymes catalyze similar reactions and produce similar products, PABA and ortho-aminobenzoate (anthranilate). Each enzyme is composed of non-identical subunits: a glutamine amidotransferase subunit (component II) and a subunit that produces an aminobenzoate products (component I). ASase catalyses the synthesis of anthranilate from chorismate and glutamine and is a tetrameric protein comprising two copies each of components I and II. Component II of ASase belongs to the family of triad GTases which hydrolyze glutamine and transfer nascent ammonia between the active sites. In some bacteria, such as Escherichia coli, component II can be much larger than in other organisms, due to the prese |
| >COG0118 HisH Glutamine amidotransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=4e-14 Score=122.45 Aligned_cols=181 Identities=27% Similarity=0.334 Sum_probs=98.9 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC--CCC--CCC--HHHHHHHHHHHCCCCCHHH Q ss_conf 6888888888878736724167722565672344566216983997377--786--550--1688899887404763223 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG--FGK--RGS--EGKIAAIKFARENKIPFLG 380 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG--FG~--RGi--eGkI~Ai~yARen~iP~LG 380 (544) T Consensus 14 L~Sv~~Aler~G------~~~~vs-------~d~-~~i~~AD~liLPGVGaf~~am~~L~~~gl~~~i~~~~~~~kP~LG 79 (204) T COG0118 14 LRSVKKALERLG------AEVVVS-------RDP-EEILKADKLILPGVGAFGAAMANLRERGLIEAIKEAVESGKPFLG 79 (204) T ss_pred HHHHHHHHHHCC------CEEEEE-------CCH-HHHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEE T ss_conf 999999999759------806981-------698-897108887866978889999988863669999999755997799 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHC Q ss_conf 55769999999987516889997000356666412115011234653001565546740231652578558706688637 Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYG 460 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg 460 (544) T Consensus 80 IClGMQlLf------------e~SeE~~~~--~GLg~i~G~V~r~~~-~~~kvPHMGWN------~l~~~~~~~l~~gi~ 138 (204) T COG0118 80 ICLGMQLLF------------ERSEEGGGV--KGLGLIPGKVVRFPA-EDLKVPHMGWN------QVEFVRGHPLFKGIP 138 (204) T ss_pred EEHHHHHHH------------HCCCCCCCC--CCCCEECCEEEECCC-CCCCCCCCCCC------EEECCCCCHHHCCCC T ss_conf 817577766------------415436898--870213016887688-88878866652------231267874432899 Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCC-CEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH Q ss_conf 984766025233327889989997895999986999-868999838998499972487732787698841589999 Q gi|254780195|r 461 LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDH-ALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544) Q Consensus 461 ~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~-~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544) T Consensus 139 ~~------~~~YFVHSY~~~~~~~~--~v~~~~~YG~~f~AaV~k~N---~~g~QFHPE-KSg~-~Gl~lL~NFl~ 201 (204) T COG0118 139 DG------AYFYFVHSYYVPPGNPE--TVVATTDYGEPFPAAVAKDN---VFGTQFHPE-KSGK-AGLKLLKNFLE 201 (204) T ss_pred CC------CEEEEEEEEEECCCCCC--EEEEECCCCCEEEEEEEECC---EEEEECCCC-CCHH-HHHHHHHHHHH T ss_conf 88------77999978761579986--18886468983589997088---999923863-1138-78999999984 |
|
| >PRK07649 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=1e-13 Score=119.60 Aligned_cols=183 Identities=19% Similarity=0.200 Sum_probs=103.4 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHH-HHHHHHHCCCCCHHHHHH Q ss_conf 3468888888888787367241677225656723445662169839973777865501688-899887404763223557 Q gi|254780195|r 305 DAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKI-AAIKFARENKIPFLGICF 383 (544) Q Consensus 305 DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI-~Ai~yARen~iP~LGICl 383 (544) T Consensus 6 Dn~DsFT~ni~~~l~~~g~~~~v~~~d~~~~~--~i-~~-~~pd~IiLSpGPg~p~~~~~~~~~~~-~~~~~iPILGICl 80 (195) T PRK07649 6 DNYDSFTYNLVQYLGELGQELVVKRNDEVTIS--DI-EN-MKPDFLMISPGPCSPNEAGISMEVIR-YFAGKIPIFGVCL 80 (195) T ss_pred ECCCCHHHHHHHHHHHCCCEEEEECCCCCCHH--HH-HH-CCCCEEEECCCCCCHHHCCCCHHHHH-HHCCCCCEEEECH T ss_conf 58980799999999978997999889968999--99-84-19898998899999578476146799-7528997843029 Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCE Q ss_conf 69999999987516889997000356666412115011234653001565546740231652578558706688637984 Q gi|254780195|r 384 GMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDL 463 (544) Q Consensus 384 GmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~ 463 (544) T Consensus 81 G~Q~ia~~~Gg~v~~~~---~~~-----------------------------hG~~-----~~i~~~~~~lf~g~-~~~~ 122 (195) T PRK07649 81 GHQSIAQVFGGEVVRAE---RLM-----------------------------HGKT-----SLMHHDGKTIFSDI-PNPF 122 (195) T ss_pred HHHHHHHHCCCCEEECC---CEE-----------------------------ECEE-----EEEEECCCCCCCCC-CCCE T ss_conf 99999987397283379---607-----------------------------6406-----57998897634388-8875 Q ss_pred EEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 766025233327889989997895999986999868999838998499972487732787698841589999999 Q gi|254780195|r 464 IPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATV 538 (544) Q Consensus 464 I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aal 538 (544) T Consensus 123 ~v~~y-Hs~~v~~~~l----p~~~~v~a~s~~~~-i~ai~h~~~pi~-GVQFHPEs~~T~-~G~~il~NFl~k~~ 189 (195) T PRK07649 123 TATRY-HSLIVKKETL----PDCFEVTAWTEEGE-IMAIRHKTLPIE-GVQFHPESIMTS-HGKELLQNFIRKYS 189 (195) T ss_pred EEEEC-CCEEEEECCC----CCCEEEEEECCCCC-EEEEEECCCCEE-EEEECCCCCCCC-CHHHHHHHHHHHHC T ss_conf 89861-6158962357----87428999948997-899993899889-998689888997-76899999998613 |
|
| >PRK13152 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.2e-14 Score=122.33 Aligned_cols=179 Identities=20% Similarity=0.298 Sum_probs=97.8 Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECC-C-CCC--CCCH--HHHHHH-HHHHCCCCCHHH Q ss_conf 88888888887873672416772256567234456621698399737-7-786--5501--688899-887404763223 Q gi|254780195|r 308 RSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPG-G-FGK--RGSE--GKIAAI-KFARENKIPFLG 380 (544) Q Consensus 308 ~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPG-G-FG~--RGie--GkI~Ai-~yARen~iP~LG 380 (544) T Consensus 13 ~Sv~~al~~lg~----~~~i--~-------~~-~~~i~~~d~lIlPGVGsf~~~m~~L~~~~l~~~i~~~~~~~~~piLG 78 (201) T PRK13152 13 NSVAKAFEKIGA----INFI--A-------KN-PKDLQKADKLLLPGVGSFKEAMKNLKELGFIEALKEQVLVQKKPILG 78 (201) T ss_pred HHHHHHHHHCCC----CEEE--E-------CC-HHHHHHCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEE T ss_conf 999999998699----8899--7-------89-99996589589828884999998777518588999999876996699 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHH- Q ss_conf 5576999999998751688999700035666641211501123465300156554674023165257855870668863- Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIY- 459 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iY- 459 (544) T Consensus 79 IClGmQlL~------------~~s~E~~~~~--GLg~i~G~v~kl~~~~~~kvPhiGW------n~v~~~~~~~l~~~~~ 138 (201) T PRK13152 79 ICLGMQLFL------------ERGYEGGVCE--GLGFIEGEVVKFEEDLNLKIPHMGW------NELEILKQSPLYQGIP 138 (201) T ss_pred EEHHHEEEE------------ECCCCCCCCC--CEEEEEEEEEECCCCCCCCCCCCEE------EEEEECCCCHHHCCCC T ss_conf 852134621------------0424378636--5589976999867776766663225------8986034797563887 Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECC-CCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH Q ss_conf 79847660252333278899899978959999869-99868999838998499972487732787698841589999 Q gi|254780195|r 460 GLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSV-DHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544) Q Consensus 460 g~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~-d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544) T Consensus 139 ~~~~f--YF~HSy~v~~------~~~--~~~~~~~yg~~~~aav~~~N---i~G~QFHPE-KS~~-~Gl~lLknFl~ 200 (201) T PRK13152 139 NKSDF--YFVHSFYVKC------KDE--FVSAKAQYGHKFVASLQKDH---IFATQFHPE-KSQN-LGLKLLENFLR 200 (201) T ss_pred CCCEE--EEEEEEEECC------CCC--CEEEEEECCCEEEEEEEECC---EEEEECCCC-CCCH-HHHHHHHHHHC T ss_conf 66719--9972006236------887--48999984998999998499---999918941-1677-58999999974 |
|
| >PRK12564 carbamoyl phosphate synthase small subunit; Reviewed | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.5e-13 Score=114.27 Aligned_cols=181 Identities=23% Similarity=0.342 Sum_probs=120.4 Q ss_pred CEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHC-CCCEEEECCCCCCC-CCHHHHHHH Q ss_conf 3799995200148134688888888887873672416772256567234456621-69839973777865-501688899 Q gi|254780195|r 291 EVKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFY-GVHGILVPGGFGKR-GSEGKIAAI 368 (544) Q Consensus 291 ~V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~-~~dGIlVPGGFG~R-GieGkI~Ai 368 (544) T Consensus 171 ~~~V~viD~-----GvK~nIlr~L~~------rg~~v~VvP~~~----~~~~I~~~~pDGIflSNGPGDP~~~~~~i~~i 235 (355) T PRK12564 171 GYHVVAIDF-----GVKRNILRELAE------RGCRVTVVPATT----TAEEILALNPDGVFLSNGPGDPAALDYAIEMI 235 (355) T ss_pred CEEEEEEEC-----CCHHHHHHHHHH------CCCEEEEECCCC----CHHHHHCCCCCEEEECCCCCCHHHHHHHHHHH T ss_conf 718999937-----873889999998------798699968978----76576414888899679999968879999999 Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEE Q ss_conf 88740476322355769999999987516889997000356666412115011234653001565546740231652578 Q gi|254780195|r 369 KFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVS 448 (544) Q Consensus 369 ~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~ 448 (544) T Consensus 236 k~li~~~~PifGICLGHQllalA~Ga~t~Km~fGH----rG~NhPV~~l~t~-------------------------~v- 285 (355) T PRK12564 236 KELLEGKIPIFGICLGHQLLALALGAKTYKMKFGH----RGANHPVKDLETG-------------------------KV- 285 (355) T ss_pred HHHHCCCCCEEEECHHHHHHHHHCCCEECCCCCCC----CCCCCCCEECCCC-------------------------EE- T ss_conf 99852698789988879999997198442055565----7899773355787-------------------------39- Q ss_pred ECCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCH Q ss_conf 55870668863798476602523332788998999789599998699986899983899849997248773278769884 Q gi|254780195|r 449 LKEETLISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHP 528 (544) Q Consensus 449 l~~~S~~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phP 528 (544) T Consensus 286 --------------~iT-SQNHGyaVd~~sl----~~~~~vt~~nlnDgtvEGi~h~~~p-~fSVQfHPEa~pGP~D~~~ 345 (355) T PRK12564 286 --------------EIT-SQNHGFAVDEDSL----PENLEVTHVNLNDGTVEGLRHKDLP-AFSVQYHPEASPGPHDAAY 345 (355) T ss_pred --------------EEE-ECCCCEEECCCCC----CCCEEEEEEECCCCCCCCEEECCCC-EEEEEECCCCCCCCCCCHH T ss_conf --------------997-1674228666658----9873999993899967217888998-7897218899989975388 Q ss_pred HHHHHHHH Q ss_conf 15899999 Q gi|254780195|r 529 LFVSFIQA 536 (544) Q Consensus 529 LF~~fi~A 536 (544) T Consensus 346 lFd~F~~~ 353 (355) T PRK12564 346 LFDEFVEL 353 (355) T ss_pred HHHHHHHH T ss_conf 99999997 |
|
| >PRK13153 consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-13 Score=118.50 Aligned_cols=181 Identities=26% Similarity=0.346 Sum_probs=97.2 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC--CCC--CCCH--HHHHHHHHHHCCCCCHHH Q ss_conf 6888888888878736724167722565672344566216983997377--786--5501--688899887404763223 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG--FGK--RGSE--GKIAAIKFARENKIPFLG 380 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG--FG~--RGie--GkI~Ai~yARen~iP~LG 380 (544) T Consensus 12 i~Sv~~al~~lg----~~~~ii~---------~-~~~i~~~d~lIlPGVGsf~~~m~~L~~~~l~~~i~~~~~~g~piLG 77 (203) T PRK13153 12 LASVINAFEKIG----AKARLES---------D-PSKLKEYDKLILPGVGAFGDAMEHLKSNGMDEAIKEFAKSGKPFLG 77 (203) T ss_pred HHHHHHHHHHCC----CCEEEEC---------C-HHHHHHCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEE T ss_conf 999999999869----9889976---------9-9999658938987888348899977753757889999875996899 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCC---CCCCCCCCCCCCCCEEEECCEEEEECCCCHHHH Q ss_conf 55769999999987516889997000356666412115011234---653001565546740231652578558706688 Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKG---DQQEKRLPSDDLGATMRLGAYDVSLKEETLISR 457 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~---~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~ 457 (544) T Consensus 78 IClGmQlL~------------~~s~E~g~~~G--Lgli~G~V~~l~~~~~~~~~kiPhiGW------n~i~~~~~~~~~~ 137 (203) T PRK13153 78 ICLGMQLLF------------EKSYEFGEHEG--LGLIEGEVVKFDESKFDEPLKVPHMGW------NRLEFKKETPLFR 137 (203) T ss_pred EEHHHHHCC------------CCCEECCCCCC--CCEEEEEEEECCCCCCCCCCCCCCCCH------HHEECCCCCHHHC T ss_conf 855534200------------47590675688--848877899867222355667873435------5410345686660 Q ss_pred HHCC-CEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH Q ss_conf 6379-84766025233327889989997895999986999868999838998499972487732787698841589999 Q gi|254780195|r 458 IYGL-DLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544) Q Consensus 458 iYg~-~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544) T Consensus 138 ~~~~~~~~--YF~HSy~~~~~------~~-~~~~~~~~g~~~~aai~~~N---i~G~QFHPE-KS~~-~Gl~llknFl~ 202 (203) T PRK13153 138 GLPESFYL--YFVHSYHAVCD------DK-DVLGKTTYGYEFVSAVQHDN---VFGFQPHPE-KSHD-NGLKILKNFVE 202 (203) T ss_pred CCCCCCEE--EEEEEEECCCC------CC-CEEEEECCCCEEEEEEEECC---EEEEECCCC-CCCH-HHHHHHHHHHC T ss_conf 77768739--99910342568------76-89999559986899998299---999928944-0778-59999999961 |
|
| >PRK08007 para-aminobenzoate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.2e-13 Score=117.05 Aligned_cols=181 Identities=19% Similarity=0.219 Sum_probs=103.8 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH Q ss_conf 34688888888887873672416772256567234456621698399737778655016888998874047632235576 Q gi|254780195|r 305 DAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLGICFG 384 (544) Q Consensus 305 DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai~yARen~iP~LGIClG 384 (544) T Consensus 6 Dn~DsFT~ni~~~l~~~g~~v~V~~~d~~~~~~---i~~~-~p~~IvlSpGPg~P~~~~~~~~~i~~~~~~iPiLGIClG 81 (187) T PRK08007 6 DNYDSFTWNLYQYFCELGADVLVKRNDALTLAD---IDAL-KPQKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLG 81 (187) T ss_pred ECCCCHHHHHHHHHHHCCCEEEEEECCCCCHHH---HHHC-CCCEEEECCCCCCHHHCCCCHHHHHHHCCCCCEEEECHH T ss_conf 689818999999998779979999389899999---9842-989799999999958908404689975389988998799 Q ss_pred HHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEE Q ss_conf 99999999875168899970003566664121150112346530015655467402316525785587066886379847 Q gi|254780195|r 385 MQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLI 464 (544) Q Consensus 385 mQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I 464 (544) T Consensus 82 ~Q~ia~~~Gg~v~~---~~~~~h-----------------------------G~-----~~~i~~~~~~lf~~~~~~~~v 124 (187) T PRK08007 82 HQAMAQAFGGKVVR---AAKVMH-----------------------------GK-----TSPITHNGEGVFRGLANPLTV 124 (187) T ss_pred HHHHHHHCCCEEEE---CCCCCC-----------------------------CC-----CEEEEECCCCCCCCCCCCEEE T ss_conf 99999980980734---783201-----------------------------52-----069998998626789987378 Q ss_pred EEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH Q ss_conf 66025233327889989997895999986999868999838998499972487732787698841589999 Q gi|254780195|r 465 PERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544) Q Consensus 465 ~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544) T Consensus 125 ~-~-~hs~~v~~~~---l-p~~~~v~a~~~~~-~v~ai~~~~~~~~-GVQFHPEs~~T~~-G~~il~NFl~ 186 (187) T PRK08007 125 T-R-YHSLVVEPDS---L-PECFEVTAWSETR-EIMGIRHRQWDLE-GVQFHPESILSEQ-GHQLLANFLH 186 (187) T ss_pred E-E-EEEEEEECCC---C-CCCEEEEEECCCC-CEEEEEECCCCEE-EEEECCCCCCCCC-HHHHHHHHHC T ss_conf 9-7-5578886476---8-9815999992998-6899998999989-9995897799967-7899999857 |
|
| >CHL00101 trpG anthranilate synthase component 2 | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.1e-13 Score=116.06 Aligned_cols=184 Identities=18% Similarity=0.215 Sum_probs=102.3 Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHH Q ss_conf 48134688888888887873672416772256567234456621698399737778655016888998874047632235 Q gi|254780195|r 302 HLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLGI 381 (544) Q Consensus 302 ~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai~yARen~iP~LGI 381 (544) T Consensus 6 D~~dsft---~~i~r~lrelg~~~~v~~~d~~~~~--~i-~-~~~p~gIILS~GPg~p~~~~~~~~~~~~~~~~iPILGI 78 (190) T CHL00101 6 DNYDSFT---YNLVQSLGELNSDLLVCRNDEIDLS--KI-K-NLNPRHIIISPGPGHPRDSGISLDVISSYAPTIPILGV 78 (190) T ss_pred ECCCHHH---HHHHHHHHHCCCEEEEECCCCCCHH--HH-H-HCCCCEEEECCCCCCHHHCCCCHHHHHHHHCCCCEEEE T ss_conf 7888089---9999999868998999869989999--99-7-07979899979999957857616899997149987897 Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCC Q ss_conf 57699999999875168899970003566664121150112346530015655467402316525785587066886379 Q gi|254780195|r 382 CFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGL 461 (544) Q Consensus 382 ClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~ 461 (544) T Consensus 79 ClG~Q~ia~~~Gg~v~~~---~~~~~-----------------------------G~~-----~~i~~~~~~lf~g~~~~ 121 (190) T CHL00101 79 CLGHQSIGYVYGGKIIKA---SKPMH-----------------------------GKT-----SLIYHNHDDLFQGLPNP 121 (190) T ss_pred CHHHHHHHHHCCCEEEEC---CCEEE-----------------------------CCE-----EEEEECCCCCCCCCCCC T ss_conf 398899988758649978---82043-----------------------------624-----79997898754379988 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 8476602523332788998999789599998699986899983899849997248773278769884158999999 Q gi|254780195|r 462 DLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQAT 537 (544) Q Consensus 462 ~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aa 537 (544) T Consensus 122 ~~~--~~~hs~~v~~~~---l-p~~~~v~a~s~~~-~i~ai~h~~~~~i~GVQFHPEs~~T~-~G~~il~NFl~la 189 (190) T CHL00101 122 FIA--TRYHSLIIDREN---L-PSCLEITAWTEDG-LIMACRHKKYPMLRGIQFHPESILTE-HGQQLLRNFLSLS 189 (190) T ss_pred CEE--EECCEEEEEECC---C-CCCEEEEEECCCC-CEEEEEECCCCCEEEEEECCCCCCCC-CHHHHHHHHHHHC T ss_conf 489--870779998045---7-8987999997999-68999978999879999748669994-8699999999860 |
|
| >PRK13181 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.3e-14 Score=123.03 Aligned_cols=179 Identities=27% Similarity=0.338 Sum_probs=97.6 Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECC-C-CCC--CCC--HHHHHHHHHHHCCCCCHHHH Q ss_conf 88888888887873672416772256567234456621698399737-7-786--550--16888998874047632235 Q gi|254780195|r 308 RSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPG-G-FGK--RGS--EGKIAAIKFARENKIPFLGI 381 (544) Q Consensus 308 ~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPG-G-FG~--RGi--eGkI~Ai~yARen~iP~LGI 381 (544) T Consensus 13 ~si~r~l~~lg~----~~~i--~-------~~-~~~l~~~d~lIlPGvG~~~~~~~~l~~~~~~~~i~~~~~~~~PiLGI 78 (199) T PRK13181 13 RSVANALKRLGV----EAVV--S-------SD-PEEIEGADKVILPGVGAFGQAMAALRESGLDEAIKEHVEKKQPVLGI 78 (199) T ss_pred HHHHHHHHHCCC----EEEE--E-------CC-HHHHHHHHCEECCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEE T ss_conf 999999998698----0999--7-------99-99974211004579865330256665638679999999769988998 Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHH-C Q ss_conf 576999999998751688999700035666641211501123465300156554674023165257855870668863-7 Q gi|254780195|r 382 CFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIY-G 460 (544) Q Consensus 382 ClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iY-g 460 (544) T Consensus 79 ClGmQlL~~------------~~~e-g~~--~GLgl~~g~v~~~~-~~~~~~phiG------w~~i~~~~~~~lf~~~~~ 136 (199) T PRK13181 79 CLGMQLLCE------------SSEE-GNV--KGLGLIPGDVKRFR-SGKDKVPQMG------WNSVKPLKESPLFKGIEE 136 (199) T ss_pred EEEEEEEEE------------CCCC-CCC--CCCCEECCEEEECC-CCCCCCCCCC------CEEEEEECCCHHHCCCCC T ss_conf 042676541------------0003-654--66666212899827-7655557777------458876216844537655 Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH Q ss_conf 984766025233327889989997895999986999868999838998499972487732787698841589999 Q gi|254780195|r 461 LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544) Q Consensus 461 ~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544) T Consensus 137 ~~~~--yf~Hs~~v~~~------~~~~~~a~~~~g~~~~~~v~~~n---i~GvQFHPE-~s~-~~G~~il~nFl~ 198 (199) T PRK13181 137 NSRF--YFVHSYYVPPE------DPEDVLATTNYGVPFCSAVEKDN---IYAVQFHPE-KSG-KAGLKLLKNFAE 198 (199) T ss_pred CCEE--EEEEEEEEECC------CCCCEEEEECCCCEEEEEEECCC---EEEEECCCC-CCC-HHHHHHHHHHHC T ss_conf 5604--88850378617------87632799638984999998999---999908978-178-609999999866 |
|
| >CHL00188 hisH imidazole glycerol phosphate synthase subunit hisH; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.4e-14 Score=122.97 Aligned_cols=191 Identities=21% Similarity=0.251 Sum_probs=94.5 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC--CCC--CCC--HHHHHHHHHHHCCCCCH Q ss_conf 346888888888878736724167722565672344566216983997377--786--550--16888998874047632 Q gi|254780195|r 305 DAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG--FGK--RGS--EGKIAAIKFARENKIPF 378 (544) Q Consensus 305 DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG--FG~--RGi--eGkI~Ai~yARen~iP~ 378 (544) T Consensus 12 GNi~Sv~~al~~~g~------~~~ii~-------~-~~~i~~~d~lILPGVGsf~~~m~~L~~~~l~~~i~~~~~~g~pi 77 (210) T CHL00188 12 GNLHSVSRAIQQAGQ------QPCIIN-------S-ESELAQVHALVLPGVGSFDLAMKKLEKKGLITPIKKWIAEGNPF 77 (210) T ss_pred HHHHHHHHHHHHCCC------CEEEEC-------C-HHHHHHCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCE T ss_conf 789999999998699------879979-------9-99996489689888673899999886305169999999769986 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCE-EEECCEEEEECCCCHHHH Q ss_conf 2355769999999987516889997000356666412115011234653001565546740-231652578558706688 Q gi|254780195|r 379 LGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGAT-MRLGAYDVSLKEETLISR 457 (544) Q Consensus 379 LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGT-MRLG~~~~~l~~~S~~~~ 457 (544) T Consensus 78 LGICLGmQlLf-----------~-~seEg~~---~GLgli~G~v~k~~~~~~~kvPh~GWn~i~~~~~~~~~~~~~~~~~ 142 (210) T CHL00188 78 IGICLGLHLLF-----------E-TSEEGKE---EGLGIYKGQVKRLKHSPVKVIPHMGWNRLECQNSECQNSEWVNWKA 142 (210) T ss_pred EEEEHHEEEEE-----------H-HCCCCCC---CCCCEECCEEEECCCCCCCCCCCCCHHHEECCCCCCCCCCCCHHHC T ss_conf 99842102210-----------2-2115676---7734566689993788664673205423244576433444511215 Q ss_pred HHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEC-CCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH Q ss_conf 637984766025233327889989997895999986-9998689998389984999724877327876988415899999 Q gi|254780195|r 458 IYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFS-VDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQA 536 (544) Q Consensus 458 iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~-~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~A 536 (544) T Consensus 143 ~~~~~~~--YFvHSY~~~~~------~~~~~~~~~~yg~~~~~a~v~k~N---i~G~QFHPE-KS~~-~Gl~lL~nFl~~ 209 (210) T CHL00188 143 WPLNPWA--YFVHSYGVMPK------SQACATTTTFYGKQQMVAAIEYDN---IFAMQFHPE-KSGE-FGLWLLREFMKK 209 (210) T ss_pred CCCCCCE--EEEEEEEECCC------CCCEEEEEEEECCEEEEEEEEECC---EEEEECCCC-CCCH-HHHHHHHHHHHC T ss_conf 7767707--99741355279------843799999639989999997199---999948800-0768-799999999755 Q ss_pred H Q ss_conf 9 Q gi|254780195|r 537 T 537 (544) Q Consensus 537 a 537 (544) T Consensus 210 ~ 210 (210) T CHL00188 210 A 210 (210) T ss_pred C T ss_conf 9 |
|
| >PRK13175 consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.6e-13 Score=118.07 Aligned_cols=182 Identities=22% Similarity=0.321 Sum_probs=97.2 Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC--CC--CCCC--HHHHHHHHHHHCCCCCHHHH Q ss_conf 888888888878736724167722565672344566216983997377--78--6550--16888998874047632235 Q gi|254780195|r 308 RSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG--FG--KRGS--EGKIAAIKFARENKIPFLGI 381 (544) Q Consensus 308 ~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG--FG--~RGi--eGkI~Ai~yARen~iP~LGI 381 (544) T Consensus 15 ~si~~al~~lg~------~~~i~~-------~-~~~i~~~d~lILPGvGsf~~~~~~l~~~~l~~~i~~~~~~g~PiLGI 80 (206) T PRK13175 15 HSVCKALERLGA------EPILTS-------D-PADLLAADALILPGVGAFDPAMQNLRSRGLIPPIKDAIASGKPFLGI 80 (206) T ss_pred HHHHHHHHHCCC------CEEEEC-------C-HHHHHCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEE T ss_conf 999999998799------899979-------9-89983289289689985267887555318716899998569977998 Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHH-HHHC Q ss_conf 576999999998751688999700035666641211501123465300156554674023165257855870668-8637 Q gi|254780195|r 382 CFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLIS-RIYG 460 (544) Q Consensus 382 ClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~-~iYg 460 (544) T Consensus 81 ClGmQlL~-~-----------~see-g~~--~GLgli~g~V~k~~~~~~~~iPh~Gw------~~i~~~~~~~l~~~~~~ 139 (206) T PRK13175 81 CLGLQLLF-E-----------SSEE-GTE--PGLGILPGKVQRFPSEPGLRIPHMGW------NQLLTQPDCPLWENLPP 139 (206) T ss_pred EHHHHHHH-H-----------CCCC-CCC--CCCCEECEEEEECCCCCCCCCCCCCC------EEEEECCCCCCCCCCCC T ss_conf 67866761-3-----------2534-564--77635210798626555533761045------05785178842011267 Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEC-CCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 984766025233327889989997895999986-99986899983899849997248773278769884158999999 Q gi|254780195|r 461 LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFS-VDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQAT 537 (544) Q Consensus 461 ~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~-~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aa 537 (544) T Consensus 140 ~~~~--yf~HSy~~~~~------~~~~~~~~~~~~~~~~~a~v~~~n---i~G~QFHPE-kS~~-~G~~llknFl~~v 204 (206) T PRK13175 140 NPWV--YFVHSYYAVPL------DPSDTAATVTHGSQKVTAAIARDN---LMAVQFHPE-KSGT-AGLKLLRNFVSQV 204 (206) T ss_pred CCCE--EEEECCEEEEC------CCCCEEEEEECCCCCEEEEEECCC---EEEEECCCC-CCCC-CHHHHHHHHHHHH T ss_conf 8823--89750078406------876269999608983899997899---999948982-4684-3789999999996 |
|
| >PRK13179 consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.7e-13 Score=117.90 Aligned_cols=181 Identities=22% Similarity=0.265 Sum_probs=97.0 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECC--CCCC--CCCH--HHHHHHHHHHCCCCCHHH Q ss_conf 688888888887873672416772256567234456621698399737--7786--5501--688899887404763223 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPG--GFGK--RGSE--GKIAAIKFARENKIPFLG 380 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPG--GFG~--RGie--GkI~Ai~yARen~iP~LG 380 (544) T Consensus 12 i~Sv~~al~~~g~------~~~i~~-------~-~~~i~~~d~lILPGVGsF~~~m~~L~~~~l~~~i~~~~~~~kpiLG 77 (207) T PRK13179 12 LRSVQKGFEKVGF------EAVVTA-------D-PKVVLEAEKVVLPGVGAFRDCMRNLEQGGFVEPILRVIRDGRPFLG 77 (207) T ss_pred HHHHHHHHHHCCC------CEEEEC-------C-HHHHHHCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEE T ss_conf 9999999998599------879968-------9-9999439989989978679999998853761689999865996899 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCC-----CCCCCCCCCCCCCEEEECCEEEEECCCCHH Q ss_conf 557699999999875168899970003566664121150112346-----530015655467402316525785587066 Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGD-----QQEKRLPSDDLGATMRLGAYDVSLKEETLI 455 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~-----~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~ 455 (544) T Consensus 78 ICLGmQlL--------f----~~S~E~g~~~G--Lgli~G~V~kl~~~~~~~~~~~kiPhiGW------n~i~~~~~~~~ 137 (207) T PRK13179 78 ICVGMQLL--------F----TDSEEFGLYQG--LNVIPGHVLRFPEGMREGGEELKVPHMGW------NQLSIRRRPPA 137 (207) T ss_pred EEHHHHHC--------C----CCCCCCCCCCC--CCEECEEEEECCCCCCCCCCCCCCCEEEE------EEEECCCCCCH T ss_conf 80779963--------7----98806995577--87834079987644344465466875112------56643678831 Q ss_pred HHHH-CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCC-CEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHH Q ss_conf 8863-7984766025233327889989997895999986999-8689998389984999724877327876988415899 Q gi|254780195|r 456 SRIY-GLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDH-ALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSF 533 (544) Q Consensus 456 ~~iY-g~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~-~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~f 533 (544) T Consensus 138 ~~~~~~~~~f--YFvHSY~~~~~~------~~-~i~~~~~yg~~~~a~v~k~N---i~G~QFHPE-KS~~-~Gl~lLknF 203 (207) T PRK13179 138 FQGIEDGTNV--YFVHSYYVKPDD------ES-VVAATTGYGIEFCAAVWKDN---IVATQFHPE-KSQA-VGLSILKNF 203 (207) T ss_pred HCCCCCCCEE--EEEECCEECCCC------CC-CEEEEEECCCEEEEEEEECC---EEEEECCHH-HCCH-HHHHHHHHH T ss_conf 0144567707--998431641578------45-18999848997999999699---999958801-2558-689999999 Q ss_pred HH Q ss_conf 99 Q gi|254780195|r 534 IQ 535 (544) Q Consensus 534 i~ 535 (544) T Consensus 204 ~e 205 (207) T PRK13179 204 GE 205 (207) T ss_pred HH T ss_conf 71 |
|
| >PRK07765 para-aminobenzoate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.5e-13 Score=112.55 Aligned_cols=185 Identities=17% Similarity=0.202 Sum_probs=108.1 Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHH-HHHHHHHHCCCCCHHH Q ss_conf 481346888888888878736724167722565672344566216983997377786550168-8899887404763223 Q gi|254780195|r 302 HLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGK-IAAIKFARENKIPFLG 380 (544) Q Consensus 302 ~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGk-I~Ai~yARen~iP~LG 380 (544) T Consensus 7 Dn~DSFT~n---i~~~lr~lg~~v~V~~~d~--~~~~~~~~~~~~~dgIILSpGPg~P~~~~~~~~~i~~~~~~~iPILG 81 (221) T PRK07765 7 DNYDSFVFN---LVQYLGQLGVEAEVWRNDD--VRLADEAAVAAGFDGVLLSPGPGTPERAGASIDMVRACAAAGTPLLG 81 (221) T ss_pred ECCCCHHHH---HHHHHHHCCCEEEEEECCC--CCHHHHHHHHCCCCEEEECCCCCCHHHCCCCHHHHHHHHCCCCCEEE T ss_conf 388933999---9999987799189998998--99889987634899899969999801167248899875325998898 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHC Q ss_conf 55769999999987516889997000356666412115011234653001565546740231652578558706688637 Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYG 460 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg 460 (544) T Consensus 82 IClG~Q~ia~~~Gg~v~~~~---~~~h-----------------------------G~~-----~~i~~~~~~lf~gl~~ 124 (221) T PRK07765 82 VCLGHQAIGVAFGATVDRAP---ELLH-----------------------------GKT-----SSVHHTNVGVLQGLPD 124 (221) T ss_pred EEHHHHHHHHHHCCEEEECC---CCCE-----------------------------EEE-----EEEEECCCCCCCCCCC T ss_conf 70999999998397898889---5536-----------------------------568-----7999899876158999 Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 98476602523332788998999789599998699986899983899849997248773278769884158999999 Q gi|254780195|r 461 LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQAT 537 (544) Q Consensus 461 ~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aa 537 (544) T Consensus 125 ~~~~~ry--HS~~v~~~~----lP~~~~v~A~s~~~-~ima~~h~~~~-i~GVQFHPEs~~T~-~G~~ll~NFl~ic 192 (221) T PRK07765 125 PFTATRY--HSLTILPET----LPAELEVTARTDSG-VIMAVRHRELP-IHGVQFHPESILTE-GGHRMLANWLTYC 192 (221) T ss_pred CEEEEEE--EEEEEEECC----CCCCCEEEEECCCC-CEEEEEECCCC-EEEEEECCCCCCCC-CHHHHHHHHHHHH T ss_conf 7478874--218997615----89962899984998-68658707897-89999788535781-6699999999981 |
|
| >PRK13177 consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.7e-13 Score=116.49 Aligned_cols=181 Identities=22% Similarity=0.326 Sum_probs=96.9 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC--CCC-----CCCHHHHHHHH-HHHCCCCCH Q ss_conf 6888888888878736724167722565672344566216983997377--786-----55016888998-874047632 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG--FGK-----RGSEGKIAAIK-FARENKIPF 378 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG--FG~-----RGieGkI~Ai~-yARen~iP~ 378 (544) T Consensus 15 i~Sv~~al~~~g~~~-----~~------i~-~~-~~~i~~~d~lIlPGVGsF~~~m~~Lk~~~~~~~~i~~~~~~~~~pi 81 (207) T PRK13177 15 LRSVHNALKAAGAEG-----VV------VT-AD-PDEVRRADRVVLPGVGAFAACMGGLRAIPGMVEAMEERVLEGGAPF 81 (207) T ss_pred HHHHHHHHHHCCCCC-----EE------EE-CC-HHHHHCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCE T ss_conf 999999999829982-----89------95-89-9998359979989978789999776410444899999999769956 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCC-CCCCCCCCCCCCCEEEECCEEEEECCCCHHHH Q ss_conf 23557699999999875168899970003566664121150112346-53001565546740231652578558706688 Q gi|254780195|r 379 LGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGD-QQEKRLPSDDLGATMRLGAYDVSLKEETLISR 457 (544) Q Consensus 379 LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~-~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~ 457 (544) T Consensus 82 LGICLGmQlLf------------~~s~E~g~~~--GLgli~G~V~~l~~~~~~~kiPh~GW------n~v~~~~~~~--~ 139 (207) T PRK13177 82 LGICVGMQLLA------------DRGEEHGVTP--GLGWIGGEVRLIEPADPSCKVPHMGW------NDVAPTTGSH--P 139 (207) T ss_pred EEECHHHHHHH------------HCCCCCCCCC--CCCEECCEEEEECCCCCCCCCCEEEE------HEEEECCCCC--C T ss_conf 99818788576------------5760788777--54554536898168887775876440------1025446677--6 Q ss_pred HHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH Q ss_conf 637984766025233327889989997895999986999868999838998499972487732787698841589999 Q gi|254780195|r 458 IYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544) Q Consensus 458 iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544) T Consensus 140 ~~~~~~~--YFvHSY~~~~~------~~~~i~~~t~y~~~~~a~v~k~N---i~G~QFHPE-KS~~-~Gl~lLknFl~ 204 (207) T PRK13177 140 LIRPGEA--YFLHSYHFVPD------DGAHVLATTDHGGGITAAVARDN---IVGVQFHPE-KSQA-YGLALLARFLD 204 (207) T ss_pred CCCCCCE--EEEEEEEEECC------CCCCEEEEECCCCEEEEEEEECC---EEEEECCCC-CCCH-HHHHHHHHHHC T ss_conf 6777845--78988898538------97416899737998999999599---999939920-0678-68999999877 |
|
| >PRK13146 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1e-13 Score=119.48 Aligned_cols=183 Identities=19% Similarity=0.260 Sum_probs=98.1 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECC-C-CCC--CCCHH--HHHHHHHHHCCCCCHHH Q ss_conf 688888888887873672416772256567234456621698399737-7-786--55016--88899887404763223 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPG-G-FGK--RGSEG--KIAAIKFARENKIPFLG 380 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPG-G-FG~--RGieG--kI~Ai~yARen~iP~LG 380 (544) T Consensus 14 i~Sv~~al~~~~~~~----~i~i~-------~~-~~~i~~~d~lIlPGVGsf~~~m~~L~~~~~~~~i~~~~~~~kpiLG 81 (208) T PRK13146 14 LRSAARALERAAPGA----DVTVT-------AD-PDAVRAADRLVLPGVGAFADCMRGLRAVGGLREAVEEAAAGRPFLG 81 (208) T ss_pred HHHHHHHHHHHCCCC----EEEEE-------CC-HHHHHHCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEE T ss_conf 999999999857997----39996-------99-9998428878983889779999987640768999999983998798 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCC-CCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHH Q ss_conf 55769999999987516889997000356666412115011234-65300156554674023165257855870668863 Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKG-DQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIY 459 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~-~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iY 459 (544) T Consensus 82 ICLGmQlL~------------~~s~E~g~~~--GLgli~G~V~kl~~~~~~~kiPhiGW------n~i~~~~~~~l~~~i 141 (208) T PRK13146 82 ICVGMQLLF------------ERGEEHGDTP--GLGWIPGDVVRLQPDGPALKVPHMGW------NTVDQPRDHPLFDGI 141 (208) T ss_pred EEEEEEEEE------------CCCEECCCCC--CCEEECCEEEECCCCCCCCCCCCCCE------EEEEECCCCCCCCCC T ss_conf 885464121------------1240068657--01187418999987886665744252------778856898200478 Q ss_pred -CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCC-CCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH Q ss_conf -798476602523332788998999789599998699-9868999838998499972487732787698841589999 Q gi|254780195|r 460 -GLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVD-HALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544) Q Consensus 460 -g~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d-~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544) T Consensus 142 ~~~~~f--YFvHSY~~~~~~~~~-------~~a~t~yg~~~~a~v~~~---ni~G~QFHPE-KS~~-~Gl~llknFl~ 205 (208) T PRK13146 142 PDGARF--YFVHSYAAAPANPAD-------VLAWTDYGGPFTAAVARG---NLFATQFHPE-KSGD-AGLRLLRNFLA 205 (208) T ss_pred CCCCEE--EEEEEEEEECCCCHH-------EEEEEECCCEEEEEEECC---CEEEEECCCC-CCCH-HHHHHHHHHHC T ss_conf 878879--997313753188210-------089963898799999839---9999989930-0568-38999999863 |
|
| >PRK13173 consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.9e-13 Score=114.04 Aligned_cols=176 Identities=21% Similarity=0.287 Sum_probs=91.0 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCC----------CCCHHHHHHHHHHHCCCC Q ss_conf 6888888888878736724167722565672344566216983997377786----------550168889988740476 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGK----------RGSEGKIAAIKFARENKI 376 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~----------RGieGkI~Ai~yARen~i 376 (544) T Consensus 14 i~Sv~~al~~lg~----~~--~i~-------~~-~~~i~~~d~lILPG-VGsF~~~m~~L~~~~l~---~~i~~~~-~~k 74 (211) T PRK13173 14 LHSASKALSAVGA----EV--SIT-------ND-PKVIAAADKIVFPG-VGAMRDCMAGMHEAGID---EVVRQAI-FNK 74 (211) T ss_pred HHHHHHHHHHCCC----CE--EEE-------CC-HHHHHHCCEEEECC-CCCHHHHHHHHHHCCHH---HHHHHHH-CCC T ss_conf 9999999998699----88--996-------79-99984389689757-78689999998862979---9999886-299 Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCC------CCCCCCCCCCCCCEEEECCEEEEEC Q ss_conf 3223557699999999875168899970003566664121150112346------5300156554674023165257855 Q gi|254780195|r 377 PFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGD------QQEKRLPSDDLGATMRLGAYDVSLK 450 (544) Q Consensus 377 P~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~------~~~~~~~~~~~GGTMRLG~~~~~l~ 450 (544) T Consensus 75 piLGICLGMQlLf------------~~s~E~g~~~--GLgli~G~V~~l~~~~~~~~~~~~kvPhiGW------n~v~~~ 134 (211) T PRK13173 75 PVMAICVGMQALF------------EQSAENGGTP--CLSILDGTVKAFDPSWKDPKGVQIKVPHMGW------NTISGM 134 (211) T ss_pred CEEEEEHHHHHHH------------CCCCCCCCCC--CCEEEEEEEEECCCCCCCCCCCCCCCCCEEE------EEEECC T ss_conf 9899818889850------------6898899967--1306600698767444675555434660003------454335 Q ss_pred CCCHHHHHHCC--CEEEEECCCCCCCCHHHHHHHHHCCCEEEEEC-CCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCC Q ss_conf 87066886379--84766025233327889989997895999986-9998689998389984999724877327876988 Q gi|254780195|r 451 EETLISRIYGL--DLIPERHRHRYEVNVRYREKLEGCGLKFSGFS-VDHALPEVVEYINHPWFIGVQYHPELKSRPLDPH 527 (544) Q Consensus 451 ~~S~~~~iYg~--~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~-~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~ph 527 (544) T Consensus 135 ~~~--~~l~~~i~~~~~fYFvHSY~~~~~------~~~~-~~~~~~yg~~f~a~v~k~N---i~G~QFHPE-KS~~-~Gl 200 (211) T PRK13173 135 DFE--HPLWNGIDDKAHFYFVHSYYCEPA------DSSQ-VAAICDYGQPFCASILKDN---LFATQFHPE-KSHT-AGL 200 (211) T ss_pred CCC--CHHHCCCCCCCEEEEEEEEEEECC------CCCE-EEEEEECCCEEEEEEEECC---EEEEECCHH-HCCH-HHH T ss_conf 765--364449987860799866787037------8250-7899838988999999699---999908801-2458-689 Q ss_pred HHHHHHHH Q ss_conf 41589999 Q gi|254780195|r 528 PLFVSFIQ 535 (544) Q Consensus 528 PLF~~fi~ 535 (544) T Consensus 201 ~lLknFl~ 208 (211) T PRK13173 201 QLLKNFVE 208 (211) T ss_pred HHHHHHHC T ss_conf 99999973 |
|
| >PRK13171 consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.1e-13 Score=114.47 Aligned_cols=178 Identities=21% Similarity=0.342 Sum_probs=90.9 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECC-C-CCC--CCC--HHHHHHHHHHHCCCCCHHH Q ss_conf 688888888887873672416772256567234456621698399737-7-786--550--1688899887404763223 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPG-G-FGK--RGS--EGKIAAIKFARENKIPFLG 380 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPG-G-FG~--RGi--eGkI~Ai~yARen~iP~LG 380 (544) T Consensus 14 i~Sv~~al~~lg~------~~~ii~-------~-~~~i~~~~~lIlPGVGsf~~~m~~L~~~~~~~~i---~~~~~piLG 76 (200) T PRK13171 14 LGSVRYALERLGV------EARVVR-------D-AAGLQGAQRVILPGVGAAPEAMARLRAQGLIEPL---RELQVPLIG 76 (200) T ss_pred HHHHHHHHHHCCC------CEEEEC-------C-HHHHHCCCEEEECCCCCHHHHHHHHHHCCCHHHH---HHCCCCEEE T ss_conf 9999999998499------879978-------9-9999529989989988789999999872126789---864997355 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCC-HHHHHH Q ss_conf 5576999999998751688999700035666641211501123465300156554674023165257855870-668863 Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEET-LISRIY 459 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S-~~~~iY 459 (544) T Consensus 77 IClGmQlLf-----------~-~SeEg~---~~GLgli~G~V~kl~~~~~~~vPh~GW------n~i~~~~~~~~~~~~~ 135 (200) T PRK13171 77 ICLGMQLLF-----------E-HSEEGD---VECLGLLPGIVRHMTPALGIRVPHMGW------NRLVPMRDSALLAGLP 135 (200) T ss_pred EEHHHHHHH-----------C-CCCCCC---CCCCCEECCEEEECCCCCCCCCCEEEE------EEEECCCCCHHHCCCC T ss_conf 607657540-----------3-543799---766167701899867776786836424------3453367887672998 Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 798476602523332788998999789599998699986899983899849997248773278769884158999999 Q gi|254780195|r 460 GLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQAT 537 (544) Q Consensus 460 g~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aa 537 (544) T Consensus 136 ~~~~fY--FvHSY~~~~------~~~--~i~~~~~~~~f~a~v~~~n---i~G~QFHPE-KS~-~~Gl~ll~nF~~l~ 198 (200) T PRK13171 136 ERASAY--FVHGYAAPV------TAD--TVAACDHGGLFTAIVQNGL---RCGAQFHPE-RSA-DTGARILRNFLEMS 198 (200) T ss_pred CCCCEE--EECCCCCCC------CCC--EEEEECCCCEEEEEEECCC---EEEECCCCC-CCC-HHHHHHHHHHHHHH T ss_conf 798199--982961178------887--8999427984999998199---899808943-266-75799999998540 |
|
| >TIGR01855 IMP_synth_hisH imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; InterPro: IPR010139 Imidazole glycerol phosphate synthetase (IGPS) is a key metabolic enzyme, which links amino acid and nucleotide biosynthesis: it catalyses the closure of the imidazole ring within histidine biosynthesis (fifth step), and provides the substrate for de novo purine biosynthesis | Back alignment and domain information |
|---|
Probab=99.45 E-value=9e-14 Score=119.92 Aligned_cols=182 Identities=25% Similarity=0.364 Sum_probs=100.9 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH-HHHCCCCEEEECCC--CCC--CCC-H-HHHHHHHHHHCCCCCHH Q ss_conf 68888888888787367241677225656723445-66216983997377--786--550-1-68889988740476322 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPV-KHFYGVHGILVPGG--FGK--RGS-E-GKIAAIKFARENKIPFL 379 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~-~~L~~~dGIlVPGG--FG~--RGi-e-GkI~Ai~yARen~iP~L 379 (544) T Consensus 15 yrGV~~Al~~~G~~~~v~~-------------~-~y~~~~~aD~l~LPGVG~F~~aM~~l~~~~~~~~~~~~~~~~~P~l 80 (211) T TIGR01855 15 YRGVKRALKRVGAEPVVVK-------------D-SYKELEKADKLILPGVGAFKAAMARLRELGLLDLLELVVKKKKPVL 80 (211) T ss_pred HHHHHHHHHHCCCEEEEEC-------------C-CCHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE T ss_conf 9999999984498179962-------------8-6034310686785785888999999885005878899996189689 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHC-CCCCCCCEECCCHHCCCCCCCC---CCCCCCCCCEEEECCEEEEECCCC-- Q ss_conf 3557699999999875168899970003-5666641211501123465300---156554674023165257855870-- Q gi|254780195|r 380 GICFGMQMAVIEAARNLAGIPNACSTEF-SEAGVPVIALMSEWMKGDQQEK---RLPSDDLGATMRLGAYDVSLKEET-- 453 (544) Q Consensus 380 GIClGmQ~avIEfARnvlgl~dAnStEf-~~~~~pvI~~l~e~~~~~~~~~---~~~~~~~GGTMRLG~~~~~l~~~S-- 453 (544) T Consensus 81 GiCLGMQLL------------fe~SeE~g~~~--~GLG~i~G~V~k~~~~~~~~~lk~PHmGWN------~v~~~~~~C~ 140 (211) T TIGR01855 81 GICLGMQLL------------FERSEEGGGEV--PGLGLIKGKVVKLEARVSLSKLKVPHMGWN------EVEPVKESCP 140 (211) T ss_pred EEEHHHHHH------------HCCCCCCCCCC--CCCEECCCEEEEECCCCCCCCCCCCCCCCC------EEEEHHHCCC T ss_conf 998023430------------01562437886--653112761342056778872545756564------2312311551 Q ss_pred HHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHH Q ss_conf 66886379847660252333278899899978959999869998689998389984999724877327876988415899 Q gi|254780195|r 454 LISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSF 533 (544) Q Consensus 454 ~~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~f 533 (544) T Consensus 141 ll~g~~~~~~~Y--FVHSY~~~~~-----~~S~~v~a~~~YG~~F~AaV~~~n---~~G~QFHPE-KS~~-~G~~lL~nf 208 (211) T TIGR01855 141 LLKGIDKGAYFY--FVHSYYAVCE-----EESEAVLAKADYGEKFTAAVQKDN---IFGTQFHPE-KSGK-TGLKLLKNF 208 (211) T ss_pred HHCCCCCCCCEE--EEEEEEEECC-----CCHHHEEEEHHCCCCEEEEEECCC---EEEEEECCH-HHHH-HHHHHHHHH T ss_conf 130776678155--6886677616-----881150112001863044665487---899972856-8888-999999998 Q ss_pred H Q ss_conf 9 Q gi|254780195|r 534 I 534 (544) Q Consensus 534 i 534 (544) T Consensus 209 ~ 209 (211) T TIGR01855 209 L 209 (211) T ss_pred H T ss_conf 5 |
IGPS consists of two different subunits: HisH, a glutamine amidotransferase (glutaminase), and HisF, a synthase (cyclase). HisH functions to provide a source of nitrogen, which is required for the synthesis of histidine and purines. In the HisH glutaminase reaction, the hydrolysis of glutamine yields ammonia, which is then used by HisF in the subsequent synthase reaction. The X-ray structure of the HisH/HisF heterodimer of IGPS reveals a putative tunnel for the transfer of ammonia from HisH to HisF via a (beta-alpha)8 barrel fold within HisF that abuts HisH . Ammonia tunnels connect the glutaminase and synthase active sites. HisH belongs to a large group of enzymes found in diverse and fundamental anabolic pathways. These enzymes share a common domain, referred to as the type-I glutamine amidotransferase (GATase) domain, which can occur either as single polypeptides (as with HisH) or as domains of large multifunctional proteins.; GO: 0016763 transferase activity transferring pentosyl groups, 0000105 histidine biosynthetic process, 0005737 cytoplasm. |
| >PRK06895 para-aminobenzoate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.6e-12 Score=109.42 Aligned_cols=179 Identities=14% Similarity=0.149 Sum_probs=103.9 Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHH Q ss_conf 48134688888888887873672416772256567234456621698399737778655016888998874047632235 Q gi|254780195|r 302 HLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLGI 381 (544) Q Consensus 302 ~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai~yARen~iP~LGI 381 (544) T Consensus 9 D~~dsfT~ni---~~~lr~lg~~~~v~~~--~~~~----~~~~~~~~~IIlSpGPg~p~~~~~~~~~i~~~~~~~PILGI 79 (191) T PRK06895 9 NNHDSFTFNL---VDLIRKLGVPMKVVNV--EDLD----LDEVENFSHILISPGPDVPRAYPQLFAMLERYYQQKSILGV 79 (191) T ss_pred ECCCHHHHHH---HHHHHHCCCEEEEEEC--CCCC----HHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEE T ss_conf 6988489999---9999877996999847--8489----98985589699908999801052249999986068987898 Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCC Q ss_conf 57699999999875168899970003566664121150112346530015655467402316525785587066886379 Q gi|254780195|r 382 CFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGL 461 (544) Q Consensus 382 ClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~ 461 (544) T Consensus 80 ClG~Q~i~~~~Gg~v~~~~---~~~-----------------------------hG~-----~~~i~~~~~~~lf~g~~~ 122 (191) T PRK06895 80 CLGHQTLCEFFGGTLYNLE---NVR-----------------------------HGQ-----QRTLKVRSNSPLFDGLPE 122 (191) T ss_pred CHHHHHHHHHHCCEEEECC---CCE-----------------------------EEE-----EEEEEECCCCCCCCCCCC T ss_conf 2999999998295799688---745-----------------------------522-----789999189834658999 Q ss_pred C-EEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH Q ss_conf 8-4766025233327889989997895999986999868999838998499972487732787698841589999 Q gi|254780195|r 462 D-LIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544) Q Consensus 462 ~-~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544) T Consensus 123 ~~~v~-~-yHs~~v~~~~l----p~~~~v~a~~~~~-~i~a~~h~~~~i-~GvQFHPEs~~T~-~G~~il~NFl~ 188 (191) T PRK06895 123 EFNIG-L-YHSWAVSQENF----PTPLEITAVCDEE-VVMAFQHKHLPI-YGVQFHPESYISE-FGEQILRNWLA 188 (191) T ss_pred CEEEE-E-EEEEEEECCCC----CCCEEEEEECCCC-EEEEEEECCCCE-EEEEECCCCCCCC-CHHHHHHHHHC T ss_conf 74876-6-67778760578----9746999975998-099888489989-9998288468887-85999999865 |
|
| >PRK06774 para-aminobenzoate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.7e-12 Score=110.80 Aligned_cols=182 Identities=19% Similarity=0.238 Sum_probs=101.8 Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHH-HHHHHHHHCCCCCHHHHH Q ss_conf 1346888888888878736724167722565672344566216983997377786550168-889988740476322355 Q gi|254780195|r 304 KDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGK-IAAIKFARENKIPFLGIC 382 (544) Q Consensus 304 ~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGk-I~Ai~yARen~iP~LGIC 382 (544) T Consensus 5 iDn~DsFT~nl~~~l~~~g~~v~V~~~d~~~~~~--i-~~~-~p~~ivLSpGPG~P~~~~~~~~~i~~-~~~~iPILGIC 79 (191) T PRK06774 5 IDNYDSFTYNLYQYFCELGTEVMVKRNDELQLTD--I-EQL-APSHVVISPGPCTPNEAGISLAVIRH-FADKLPILGVC 79 (191) T ss_pred EECCCCHHHHHHHHHHHCCCEEEEECCCCCCHHH--H-HHC-CCCEEEECCCCCCHHHHCCHHHHHHH-HCCCCCEEEEH T ss_conf 9699976999999998779959998699889999--9-853-99969999999896790730689997-44699788616 Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCC Q ss_conf 76999999998751688999700035666641211501123465300156554674023165257855870668863798 Q gi|254780195|r 383 FGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLD 462 (544) Q Consensus 383 lGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~ 462 (544) T Consensus 80 lG~Q~ia~~~Gg~v~~---~~~~~h-----------------------------G~~-----~~i~~~~~~lf~g~~~~~ 122 (191) T PRK06774 80 LGHQALGQAFGARVVR---ARQVMH-----------------------------GKT-----SAICHSGQGVFRGLNQPL 122 (191) T ss_pred HHHHHHHHHCCCEEEE---CCCCEE-----------------------------CEE-----EEEEECCCCCCCCCCCCC T ss_conf 8799986560984928---997475-----------------------------703-----689989987606899986 Q ss_pred EEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCC---EEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH Q ss_conf 47660252333278899899978959999869998---68999838998499972487732787698841589999 Q gi|254780195|r 463 LIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHA---LPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544) Q Consensus 463 ~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~---lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544) T Consensus 123 ~v~-~~-Hs~~v~~~---~l-p~~~~v~a~s~~~~~~~~i~ai~~~~~~i~-GVQFHPEs~~T~~-G~~il~NFl~ 190 (191) T PRK06774 123 TVT-RY-HSLVIATD---SL-PGCFELTAWTERGGEMDEIMGIRHRTLPLE-GVQFHPESILSEQ-GHQLLDNFLK 190 (191) T ss_pred EEE-EC-CCEEEEEC---CC-CCCEEEEEEECCCCCCCEEEEEEECCCCEE-EEEECCCCCCCCC-HHHHHHHHHC T ss_conf 885-04-65078834---48-998799999799999886888883899989-9876898899958-8899999844 |
|
| >PRK13174 consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.4e-12 Score=111.32 Aligned_cols=178 Identities=23% Similarity=0.331 Sum_probs=92.7 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECC-C-CC-------CCCCHHHHHHHHHHHCCCCC Q ss_conf 688888888887873672416772256567234456621698399737-7-78-------65501688899887404763 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPG-G-FG-------KRGSEGKIAAIKFARENKIP 377 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPG-G-FG-------~RGieGkI~Ai~yARen~iP 377 (544) T Consensus 14 i~Sv~~al~~~g~~------~~~i~------~~-~~~i~~~d~lIlPGVGsf~~~m~~L~~~~~~---~~i~~~-~~~kp 76 (212) T PRK13174 14 LHSVAKALEHVGAG------RVLVT------SD-AAVIREADRVVFPGVGAIRDCMAEIRRLGFD---SLVREV-SQDRP 76 (212) T ss_pred HHHHHHHHHHCCCC------EEEEC------CC-HHHHHHCCEEEECCCCCHHHHHHHHHHCCHH---HHHHHH-HCCCC T ss_conf 99999999974998------79983------89-8999638979965888689999998876969---999999-74998 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCC-----CCCCCCCCCCCCCCEEEECCEEEEECCC Q ss_conf 22355769999999987516889997000356666412115011234-----6530015655467402316525785587 Q gi|254780195|r 378 FLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKG-----DQQEKRLPSDDLGATMRLGAYDVSLKEE 452 (544) Q Consensus 378 ~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~-----~~~~~~~~~~~~GGTMRLG~~~~~l~~~ 452 (544) T Consensus 77 iLGICLGMQlL~------------~~s~E~g~~~--GLgli~G~V~~~~~~~~~~~~~~kiPhiGW------n~i~~~~~ 136 (212) T PRK13174 77 FLGICVGMQALL------------ERSEENGGVD--CIGLFPGQVRFFGKDLHEDGEHLKVPHMGW------NQVSQAVD 136 (212) T ss_pred EEEEEHHHHHHH------------HCCCCCCCCC--CCCCCCEEEEECCCCCCCCCCCCCCCEECC------EEEEECCC T ss_conf 799808899876------------1754789877--533635079986755565554556755001------24760688 Q ss_pred CH-HHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECC-CCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHH Q ss_conf 06-6886379847660252333278899899978959999869-998689998389984999724877327876988415 Q gi|254780195|r 453 TL-ISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSV-DHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLF 530 (544) Q Consensus 453 S~-~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~-d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF 530 (544) T Consensus 137 ~~l~~~~~~~~~f--YFvHSY~~~~~~-----~--~~~~a~t~~g~~f~a~v~k~N---i~G~QFHPE-KS~~-~Gl~lL 202 (212) T PRK13174 137 HPLWHDIPDLARF--YFVHSYYIEAGN-----P--RQVVGRGHYGVDFAAALADGS---RFAVQFHPE-KSHT-HGLQLL 202 (212) T ss_pred CCHHCCCCCCCEE--EEEEEEEECCCC-----H--HCEEEEEECCCEEEEEEEECC---EEEECCCCC-CCCH-HHHHHH T ss_conf 8121067765759--987566752698-----2--038999989988999998499---999908910-0577-589999 Q ss_pred HHHHH Q ss_conf 89999 Q gi|254780195|r 531 VSFIQ 535 (544) Q Consensus 531 ~~fi~ 535 (544) T Consensus 203 knFi~ 207 (212) T PRK13174 203 QNFAA 207 (212) T ss_pred HHHHH T ss_conf 99983 |
|
| >PRK13148 consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.7e-13 Score=114.74 Aligned_cols=181 Identities=22% Similarity=0.305 Sum_probs=91.6 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC--CCC--CCC--HHHHHHHHHHHCCCCCHHH Q ss_conf 6888888888878736724167722565672344566216983997377--786--550--1688899887404763223 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG--FGK--RGS--EGKIAAIKFARENKIPFLG 380 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG--FG~--RGi--eGkI~Ai~yARen~iP~LG 380 (544) T Consensus 14 l~Sv~~al~~~g~~~----~~~i~-------~~-~~~i~~~d~lILPGVGsF~~am~~L~~~~l~~~i~~~~-~~kpiLG 80 (225) T PRK13148 14 FHSVARALQHAAPDA----DIRIC-------NR-PEQIDAADRVVFPGQGAMPDCMRTLNESGLRAAVERAA-ASKPLMG 80 (225) T ss_pred HHHHHHHHHHHCCCC----CEEEE-------CC-HHHHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHH-CCCCEEE T ss_conf 999999999857897----39998-------99-99995499799899788799999988648799999986-3898699 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCC--------------------CCCCCCCCCCCCCCCEE Q ss_conf 5576999999998751688999700035666641211501123--------------------46530015655467402 Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMK--------------------GDQQEKRLPSDDLGATM 440 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~--------------------~~~~~~~~~~~~~GGTM 440 (544) T Consensus 81 ICLGMQlLf~------------~SeEg~-~--~GLgli~G~V~kl~~~~~~~~~~~~~~~~~~~~~~~~~lkiPh~GW-- 143 (225) T PRK13148 81 VCVGEQMLFE------------RSEEGD-T--PCLGIFPGEVRRFAGPQFADPVAADQAAAAPPAAARERLKVPHMGW-- 143 (225) T ss_pred EEHHHHHHHH------------CCCCCC-C--CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC-- T ss_conf 8277887662------------452269-7--7565587899981476545642112333455544354888888861-- Q ss_pred EECCEEEEECCCCHHH-HHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCC Q ss_conf 3165257855870668-863798476602523332788998999789599998699986899983899849997248773 Q gi|254780195|r 441 RLGAYDVSLKEETLIS-RIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPEL 519 (544) Q Consensus 441 RLG~~~~~l~~~S~~~-~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf 519 (544) T Consensus 144 ----n~v~~~~~~~l~~~i~~~~~f--YFvHSY~~~~~------~~~~~~a~t~yg~~f~s~v~~~N---i~G~QFHPE- 207 (225) T PRK13148 144 ----NQVRQTRSHALWEGIPDGTHF--YFVHSYYAAPS------DPALTTGVTDYGVAFTCAVAAAN---IFAVQFHPE- 207 (225) T ss_pred ----CEEECCCCCCHHCCCCCCCEE--EEEEEEEECCC------CCCCEEEEEECCCEEEEEEEECC---EEEEECCHH- T ss_conf ----203778997121266778706--88754563168------81558999858998999999699---999908812- Q ss_pred CCCCCCCCHHHHHHH Q ss_conf 278769884158999 Q gi|254780195|r 520 KSRPLDPHPLFVSFI 534 (544) Q Consensus 520 ~Srp~~phPLF~~fi 534 (544) T Consensus 208 KS~~-~Gl~lLknFl 221 (225) T PRK13148 208 KSAE-HGLRLYRNFV 221 (225) T ss_pred HHCH-HHHHHHHHHH T ss_conf 3157-7999999987 |
|
| >PRK13178 consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.5e-13 Score=113.28 Aligned_cols=185 Identities=20% Similarity=0.230 Sum_probs=99.0 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC--CCCCCCH-----HHHHHHHHHHCCCCCHH Q ss_conf 6888888888878736724167722565672344566216983997377--7865501-----68889988740476322 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG--FGKRGSE-----GKIAAIKFARENKIPFL 379 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG--FG~RGie-----GkI~Ai~yARen~iP~L 379 (544) T Consensus 12 i~Sv~~al~~lg~----~~~i--~-------~~-~~~i~~~d~lIlPGVGsf~~-~m~~L~~~~l~~~i~~~~~~gkpiL 76 (213) T PRK13178 12 QTSVRRALNHLGI----PCVI--T-------AD-PEVIQGAAGIIFPGVGAAGQ-AMNELRTTGLDEVLREQVQAGKPLL 76 (213) T ss_pred HHHHHHHHHHCCC----CEEE--E-------CC-HHHHHHCCEEEECCCCCHHH-HHHHHHHCCHHHHHHHHHHCCCCEE T ss_conf 9999999998699----9899--7-------79-99994399899899885699-9998750062899998743699579 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCC------CCCCCCCCCCCCCCEEEECCEEEEECCCC Q ss_conf 355769999999987516889997000356666412115011234------65300156554674023165257855870 Q gi|254780195|r 380 GICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKG------DQQEKRLPSDDLGATMRLGAYDVSLKEET 453 (544) Q Consensus 380 GIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~------~~~~~~~~~~~~GGTMRLG~~~~~l~~~S 453 (544) T Consensus 77 GIClGmQlLf------------~~seE~~-~--~GLgli~G~v~~l~~~~~~~~~~~~kvPhiGW------n~i~~~~~~ 135 (213) T PRK13178 77 GICVGCQIML------------DYSQEND-T--KCLGIIPGECRLFNPALTDEDGAPIRVPHMGW------NSVVQRRPC 135 (213) T ss_pred EEEHHHEEEE------------CCCCCCC-C--CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC------EEEEECCCC T ss_conf 9842455554------------1442454-2--24675610699888543443477756772122------127717998 Q ss_pred H-HHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHH Q ss_conf 6-688637984766025233327889989997895999986999868999838998499972487732787698841589 Q gi|254780195|r 454 L-ISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVS 532 (544) Q Consensus 454 ~-~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~ 532 (544) T Consensus 136 ~l~~~~~~~~~f--YFvHSY~~~~~-------~~~~ia~t~yg~~f~a~v~k~---Ni~G~QFHPE-KSg~-~Gl~lLkn 201 (213) T PRK13178 136 PLFKGIEPEAEF--YFVHSYFPAPP-------EEYVIATTTYGIEFCSAHGGP---GLWAVQFHPE-KSGR-PGLRLLAN 201 (213) T ss_pred CCCCCCCCCCEE--EEEEEEEECCC-------CCCEEEEEECCCEEEEEEEEC---CEEEEECCCC-CCCH-HHHHHHHH T ss_conf 522456777879--99868985389-------864899997899799999809---9999919953-1688-69999999 Q ss_pred HHHHHHHHH Q ss_conf 999999876 Q gi|254780195|r 533 FIQATVLYS 541 (544) Q Consensus 533 fi~Aal~~~ 541 (544) T Consensus 202 F~~~~~~~~ 210 (213) T PRK13178 202 FHRYCTEAA 210 (213) T ss_pred HHHHHHHHC T ss_conf 999987650 |
|
| >PRK13144 consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.9e-12 Score=110.44 Aligned_cols=176 Identities=19% Similarity=0.248 Sum_probs=96.5 Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECC--CCCCCCCHHHHHHHHHHHCCCCCHHHHHH Q ss_conf 4688888888887873672416772256567234456621698399737--77865501688899887404763223557 Q gi|254780195|r 306 AYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPG--GFGKRGSEGKIAAIKFARENKIPFLGICF 383 (544) Q Consensus 306 aY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPG--GFG~RGieGkI~Ai~yARen~iP~LGICl 383 (544) T Consensus 12 Ni~Sv~~al~~~g~~~------~i~-------~~-~~~i~~~d~lIlPGVGsf~~--a~~~~~~~~~~i~-~kpiLGICl 74 (190) T PRK13144 12 NIGSVLAALKRAGAEP------VVV-------KE-PEEANRVDALVLPGVGTYEA--AYALARSFKEVIL-EKPTLAICL 74 (190) T ss_pred HHHHHHHHHHHCCCCE------EEE-------CC-HHHHHHCCEEEECCCCCHHH--HHHHHHHHHHHHH-CCCEEEEEH T ss_conf 8999999999849986------997-------89-99995489789748885999--9999999999974-798489876 Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCE Q ss_conf 69999999987516889997000356666412115011234653001565546740231652578558706688637984 Q gi|254780195|r 384 GMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDL 463 (544) Q Consensus 384 GmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~ 463 (544) T Consensus 75 GmQlL~-----------~-~seE~~~~G---Lgli~G~v~kl~---~~kvPh~GW------n~v~~~~~~~~---~~~~~ 127 (190) T PRK13144 75 GMQLLF-----------E-SSEEGGGRG---LGIFRGRVERIK---ARKVPHIGW------SYTRVVKPLPF---VEEGY 127 (190) T ss_pred HHHHHH-----------C-CCCCCCCCC---EEEEEEEEEECC---CCCCCEECC------CEEECCCCCCC---CCCCE T ss_conf 588664-----------4-563347876---307976999878---888876366------00034678876---44555 Q ss_pred EEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 766025233327889989997895999986999868999838998499972487732787698841589999999 Q gi|254780195|r 464 IPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATV 538 (544) Q Consensus 464 I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aal 538 (544) T Consensus 128 f--YFvHSY~~~~~------~~~~~~~~~~~g~~~~s~v~~~N---i~G~QFHPE-KS~~-~Gl~lLknFl~~~~ 189 (190) T PRK13144 128 Y--YYLHSYGVRWD------EDEAHVAYVELGRRYVAAVEKGH---ILGVQFHPE-RSGR-AGLELIRRFLAAWR 189 (190) T ss_pred E--EEEEEEEECCC------CCCCEEEEEECCCEEEEEEEECC---EEEEECCCH-HCCH-HHHHHHHHHHHHHH T ss_conf 9--99998872268------87648999975997899999598---999978800-2158-68999999999953 |
|
| >PRK12838 carbamoyl phosphate synthase small subunit; Reviewed | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.1e-12 Score=112.08 Aligned_cols=175 Identities=21% Similarity=0.324 Sum_probs=112.8 Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHC-CCCEEEECCCCCCC-CCHHHHHHHHHHHCCCCCHHHHHHHH Q ss_conf 88888888887873672416772256567234456621-69839973777865-50168889988740476322355769 Q gi|254780195|r 308 RSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFY-GVHGILVPGGFGKR-GSEGKIAAIKFARENKIPFLGICFGM 385 (544) Q Consensus 308 ~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~-~~dGIlVPGGFG~R-GieGkI~Ai~yARen~iP~LGIClGm 385 (544) T Consensus 179 ~nIlr~L~~------rg~~V~VvP~~~----~~~~i~~~~pDGiflSNGPGDP~~~~~~i~~vr~l~-~~~PifGICLGH 247 (356) T PRK12838 179 HSILRSLSK------RGCNVTVLPYNA----SLEDIKNLNPDGIVLSNGPGDPKELQPYLPTIKDLA-SSYPILGICLGH 247 (356) T ss_pred HHHHHHHHH------CCCEEEEECCCC----CCCHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHH-CCCCEEEECHHH T ss_conf 999999997------898899989988----754023249748994389989688788999999997-498889974889 Q ss_pred HHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEEE Q ss_conf 99999998751688999700035666641211501123465300156554674023165257855870668863798476 Q gi|254780195|r 386 QMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIP 465 (544) Q Consensus 386 Q~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I~ 465 (544) T Consensus 248 QllalA~Gakt~KmkfGH----rG~NhPV~~~~t--------------------------------g--------kv~IT 283 (356) T PRK12838 248 QLIALALGAETYKLPFGH----RGANHPVIDLAT--------------------------------G--------RVWMT 283 (356) T ss_pred HHHHHHHCCEEEECCCCC----CCCCCCCEECCC--------------------------------C--------CEEEE T ss_conf 999997097486415566----887826477689--------------------------------9--------48997 Q ss_pred EECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH Q ss_conf 60252333278899899978959999869998689998389984999724877327876988415899999998764 Q gi|254780195|r 466 ERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLYSQ 542 (544) Q Consensus 466 ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aal~~~~ 542 (544) T Consensus 284 -SQNHGyaVd~~s---l~~~~~~vt~~nlnD~tveGi~~~~~p~-fsVQfHPEa~PGP~D~~~lF~~F~~~~~~~k~ 355 (356) T PRK12838 284 -SQNHGYVVDEDS---IDEKQLSVTFFNLNDGSIEGLRHKKLPV-LSVQFHPEAHPGPHDAEYIFDEFLEMMGEARR 355 (356) T ss_pred -ECCCCCEECCCC---CCCCCEEEEEECCCCCCEEEEEECCCCE-EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC T ss_conf -268761677676---8988659999908999661079889986-88712889998987438899999999998736 |
|
| >PRK13170 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.5e-12 Score=108.43 Aligned_cols=175 Identities=21% Similarity=0.283 Sum_probs=92.2 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC--CCC--CCC--HHHHHHHHHHHCCCCCHHH Q ss_conf 6888888888878736724167722565672344566216983997377--786--550--1688899887404763223 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG--FGK--RGS--EGKIAAIKFARENKIPFLG 380 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG--FG~--RGi--eGkI~Ai~yARen~iP~LG 380 (544) T Consensus 13 i~Sv~~al~~lg~----~~~i--~-------~~-~~~i~~~d~lILPGVGsF~~am~~L~~~~l~~~i---~~~~kpiLG 75 (196) T PRK13170 13 LSSVKFAFERLGY----NPVV--S-------RD-PDVILAADKLFLPGVGTAQAAMDQLRERELIELI---KACTQPVLG 75 (196) T ss_pred HHHHHHHHHHCCC----CEEE--E-------CC-HHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHH---HHCCCCEEE T ss_conf 9999999998799----7999--6-------79-8998438979971899889999999873568999---970897488 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHH- Q ss_conf 5576999999998751688999700035666641211501123465300156554674023165257855870668863- Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIY- 459 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iY- 459 (544) T Consensus 76 ICLGMQlL------------~~~S~E~g~~~G--Lgli~G~V~kl-~~~~~~vPhiGW------n~i~~~~~~~l~~~i~ 134 (196) T PRK13170 76 ICLGMQLL------------GRRSEESGGVDC--LGIIDGDVPKL-TDFGLPLPHMGW------NQVTPQAGHPLFQGIE 134 (196) T ss_pred EEEEEEEE------------EECCCCCCCCCC--CEEEEEEEEEC-CCCCCCCCEEEE------EEEEECCCCHHHCCCC T ss_conf 88003134------------635536898660--00542299997-767887744214------8887358987664988 Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCC-CEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH Q ss_conf 7984766025233327889989997895999986999-868999838998499972487732787698841589999 Q gi|254780195|r 460 GLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDH-ALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544) Q Consensus 460 g~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~-~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544) T Consensus 135 ~~~~f--YFvHSY~~~~~------~--~~i-a~t~yg~~f~s~v~~~N---i~G~QFHPE-KS~~-~Gl~lLknFl~ 195 (196) T PRK13170 135 DGSYF--YFVHSYAMPVN------P--YTI-AQCNYGEPFSAAIQKDN---FYGVQFHPE-RSGA-AGAQLLKNFLE 195 (196) T ss_pred CCCEE--EEEEEEEECCC------C--CEE-EEEECCCEEEEEEEECC---EEEEECCCC-CCCH-HHHHHHHHHHC T ss_conf 58879--99877870688------8--889-99978998999997199---999968920-0678-48999999961 |
|
| >PRK13180 consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.2e-13 Score=113.86 Aligned_cols=185 Identities=21% Similarity=0.205 Sum_probs=99.1 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECC--CCCC--CCC--HHHHHHHHHHHCCCCCHHH Q ss_conf 688888888887873672416772256567234456621698399737--7786--550--1688899887404763223 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPG--GFGK--RGS--EGKIAAIKFARENKIPFLG 380 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPG--GFG~--RGi--eGkI~Ai~yARen~iP~LG 380 (544) T Consensus 14 i~Sv~~al~~~g~----~~--~i~-------~~-~~~~~~~d~lIlPGVGsf~~~m~~L~~~~~~~~i~~~~~~gkpiLG 79 (209) T PRK13180 14 LRSAQRALERVGA----EV--EVT-------AD-PDAALNADGLVVPGVGAFAACMAGLRAVGGDRIIGERLAAGRPVLG 79 (209) T ss_pred HHHHHHHHHHCCC----CE--EEE-------CC-HHHHHHCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEE T ss_conf 9999999998699----89--997-------99-9999538968999988557777765536919999999976998799 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCC-CCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHH Q ss_conf 5576999999998751688999700035-666641211501123465300156554674023165257855870668863 Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFS-EAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIY 459 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~-~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iY 459 (544) T Consensus 80 IClGMQlL~------------~~s~E~g~~~~--GLg~i~G~v~~l---~~~~vPh~GW------n~v~~~~~~~l~~~i 136 (209) T PRK13180 80 ICVGMQILF------------ERGVEHGVETE--GCGEWPGTVERL---DAPVLPHMGW------NTVEAPAGSVLFAGL 136 (209) T ss_pred EEEHEEEEE------------ECEECCCCCCC--CCCEECCEEEEC---CCCCCCCCCC------EEEECCCCCHHHHCC T ss_conf 841208887------------03111676778--813655089977---8887873565------577706776354088 Q ss_pred C-CCEEEEECCCCCCCCHHHHHHHHH-CCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH Q ss_conf 7-984766025233327889989997-895999986999868999838998499972487732787698841589999 Q gi|254780195|r 460 G-LDLIPERHRHRYEVNVRYREKLEG-CGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544) Q Consensus 460 g-~~~I~ERHRHRYEvN~~y~~~le~-~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544) T Consensus 137 ~~~~~f--YFvHSy~v~~~~~~~~~~~~~~~~~~~~~g~~~~aav~~~n---i~G~QFHPE-KS~~-~Gl~ll~nFl~ 207 (209) T PRK13180 137 DADERF--YFVHSYAAQRWEGSPDPRTAPPLVTWATHGAPFVAAVENGP---LSATQFHPE-KSGD-AGAALLRNWVD 207 (209) T ss_pred CCCCCE--EEECEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEECCC---EEEEECCCC-CCCH-HHHHHHHHHHH T ss_conf 858958--89685266345655565665535899847982699998299---999939963-2677-38999999986 |
|
| >PRK13151 consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.2e-13 Score=114.41 Aligned_cols=175 Identities=24% Similarity=0.395 Sum_probs=91.4 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC--CCC--CCCH--HHHHHHHHHHCCCCCHHH Q ss_conf 6888888888878736724167722565672344566216983997377--786--5501--688899887404763223 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG--FGK--RGSE--GKIAAIKFARENKIPFLG 380 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG--FG~--RGie--GkI~Ai~yARen~iP~LG 380 (544) T Consensus 13 i~Sv~~al~~lg~~----~~i--~-------~~-~~~i~~~d~lIlPGVGsf~~~m~~L~~~~l~---~~i~~~~kpiLG 75 (195) T PRK13151 13 LASLKFCLDRLGFN----ATI--S-------RD-LKELESADKLFLPGVGTAKEAMKNLEQFNLI---DFIQNTKKPLLG 75 (195) T ss_pred HHHHHHHHHHCCCC----EEE--E-------CC-HHHHHHCCEEEECCCCCHHHHHHHHHHCCCH---HHHHHCCCCEEE T ss_conf 99999999985998----799--6-------79-9999448969988889999999999874778---889863996688 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHC Q ss_conf 55769999999987516889997000356666412115011234653001565546740231652578558706688637 Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYG 460 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg 460 (544) T Consensus 76 ICLGMQlL--------~----~~seE~~~~gLgli~g~v~k~---~~~~~~~vPhiGWn------~v~-~~~~l~~~i-~ 132 (195) T PRK13151 76 ICLGMQIL--------G----NFSEELNQETLKLIDFTTQKF---KAKEGFTFPHMGWN------QVH-SSHALFKGL-E 132 (195) T ss_pred EEEEEEEE--------E----CCCCCCCCCCCCEEEEEEEEE---CCCCCCCCCEEEHH------HCC-CCCHHHCCC-C T ss_conf 77647876--------5----147576757626420268886---46557888674112------256-677012166-6 Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH Q ss_conf 9847660252333278899899978959999869998689998389984999724877327876988415899999 Q gi|254780195|r 461 LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQA 536 (544) Q Consensus 461 ~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~A 536 (544) T Consensus 133 ~~~--fYFvHSY~~~~------~~--~~ia~~~y~~~f~a~v~k~N---i~G~QFHPE-KS~~-~Gl~lL~nFlk~ 193 (195) T PRK13151 133 GAY--FYFVHSYCVGL------GE--YTIADCEYSQKFSASVMKDN---FYGVQFHPE-RSSE-AGEILISNFIKD 193 (195) T ss_pred CCE--EEEEEEEECCC------CC--CEEEEEECCCEEEEEEEECC---EEEEECCCH-HCCH-HHHHHHHHHHHH T ss_conf 762--78873045267------65--63789737988999999199---999928800-3058-799999999875 |
|
| >PRK08857 para-aminobenzoate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.3e-12 Score=105.41 Aligned_cols=181 Identities=17% Similarity=0.196 Sum_probs=96.5 Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHH-HHHHHHHCCCCCHHH Q ss_conf 4813468888888888787367241677225656723445662169839973777865501688-899887404763223 Q gi|254780195|r 302 HLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKI-AAIKFARENKIPFLG 380 (544) Q Consensus 302 ~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI-~Ai~yARen~iP~LG 380 (544) T Consensus 6 Dn~DsfT---~ni~~~l~~lg~~v~vv~~d--~~~~~~-i~-~~~p~~IilS~GPg~p~~~~~~~~~~~~-~~~~iPILG 77 (192) T PRK08857 6 DNYDSFT---YNLYQYFCELGAEVKVVRND--EIDIAG-IE-ALNPSHLVISPGPCTPNEAGISLQAIEH-FAGKLPILG 77 (192) T ss_pred ECCCCHH---HHHHHHHHHCCCEEEEEECC--CCCHHH-HH-HCCCCEEEECCCCCCHHHCCCCHHHHHH-HCCCCCEEE T ss_conf 7999779---99999998779928999699--899999-98-4297959998999996782861466997-357999899 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHC Q ss_conf 55769999999987516889997000356666412115011234653001565546740231652578558706688637 Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYG 460 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg 460 (544) T Consensus 78 IClG~Q~ia~~~Gg~v~~~~---~~~h-----------------------------G~~-----~~i~~~~~~lf~~~-~ 119 (192) T PRK08857 78 VCLGHQAIAQVFGGDVVRAR---QVMH-----------------------------GKT-----SPIRHTGRSVFKGL-N 119 (192) T ss_pred ECHHHHHHHHHHCCEEEECC---CCEE-----------------------------EEE-----EEEEECCCEEEECC-C T ss_conf 87999999998398299888---4325-----------------------------115-----79998993047369-9 Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCC--CC--EEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH Q ss_conf 98476602523332788998999789599998699--98--68999838998499972487732787698841589999 Q gi|254780195|r 461 LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVD--HA--LPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544) Q Consensus 461 ~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d--~~--lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544) T Consensus 120 ~~~~v~~~-Hs~~v~~~~----lp~~~~v~a~t~~~~~~~~~i~a~~h~~~~i~-GVQFHPEs~~T~-~G~~il~NFl~ 191 (192) T PRK08857 120 NPLTVTRY-HSLVVKNDT----LPECFELTAWTELEDGSMDEIMGFQHKTLPIE-AVQFHPESIKTE-QGHQLLANFLA 191 (192) T ss_pred CCEEEEEC-CCEEEECCC----CCCCEEEEEEEECCCCCCCCEEEEEECCCCEE-EEEECCCCCCCC-CHHHHHHHHHC T ss_conf 88798962-552789574----89982999997268899770538883899989-998779779984-74899999726 |
|
| >COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.6e-11 Score=101.11 Aligned_cols=173 Identities=25% Similarity=0.371 Sum_probs=118.4 Q ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHH-CCCCEEEECCCCCC-CCCHHHHHHHHHHHCCCCCHHHHHHHHH Q ss_conf 888888888787367241677225656723445662-16983997377786-5501688899887404763223557699 Q gi|254780195|r 309 SLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHF-YGVHGILVPGGFGK-RGSEGKIAAIKFARENKIPFLGICFGMQ 386 (544) Q Consensus 309 Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L-~~~dGIlVPGGFG~-RGieGkI~Ai~yARen~iP~LGIClGmQ 386 (544) T Consensus 192 nIlr~L~----~rg~--~vtVVP~~t----~~eeIl~~~pDGiflSNGPGDP~~~~~~i~~ik~l~~~~iPifGICLGHQ 261 (368) T COG0505 192 NILRELV----KRGC--RVTVVPADT----SAEEILALNPDGIFLSNGPGDPAPLDYAIETIKELLGTKIPIFGICLGHQ 261 (368) T ss_pred HHHHHHH----HCCC--EEEEECCCC----CHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHH T ss_conf 7999999----7798--499976989----99999851899799748998806778999999998646898378868889 Q ss_pred HHHHHHHHHCCCCCCCCHHHCC--CCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEE Q ss_conf 9999998751688999700035--66664121150112346530015655467402316525785587066886379847 Q gi|254780195|r 387 MAVIEAARNLAGIPNACSTEFS--EAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLI 464 (544) Q Consensus 387 ~avIEfARnvlgl~dAnStEf~--~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I 464 (544) T Consensus 262 llalA~Ga~T~Kmk------FGHrG~NhPV~dl~tg-------------------------rv~---------------I 295 (368) T COG0505 262 LLALALGAKTYKMK------FGHRGANHPVKDLDTG-------------------------RVY---------------I 295 (368) T ss_pred HHHHHCCCCEEECC------CCCCCCCCCCCCCCCC-------------------------EEE---------------E T ss_conf 99986678643203------6887789676316588-------------------------089---------------9 Q ss_pred EEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC Q ss_conf 6602523332788998999789599998699986899983899849997248773278769884158999999987644 Q gi|254780195|r 465 PERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLYSQS 543 (544) Q Consensus 465 ~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aal~~~~~ 543 (544) T Consensus 296 -TSQNHGyaVd~~---s~~~~~-~vth~nlnDgTvEGi~h~~~P~-fSVQ~HPEAsPGPhDt~ylFd~Fi~~~~~~~~~ 368 (368) T COG0505 296 -TSQNHGYAVDED---SLVETL-KVTHVNLNDGTVEGIRHKDLPA-FSVQYHPEASPGPHDTRYLFDEFIELMEAAKKE 368 (368) T ss_pred -EECCCCEECCHH---HCCCCC-EEEEEECCCCCCCCEECCCCCE-EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC T ss_conf -946886013822---327776-0589817999700245279863-787148999989864477999999999875249 |
|
| >PRK13172 consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=5e-12 Score=107.31 Aligned_cols=182 Identities=21% Similarity=0.308 Sum_probs=90.7 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC--CCC--CCC--HHHHHHHHHHHCCCCCHHH Q ss_conf 6888888888878736724167722565672344566216983997377--786--550--1688899887404763223 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG--FGK--RGS--EGKIAAIKFARENKIPFLG 380 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG--FG~--RGi--eGkI~Ai~yARen~iP~LG 380 (544) T Consensus 14 i~Sv~~al~~lg------~~~~i~~-------~-~~~i~~~d~lIlPGVGsF~~~m~~L~~~~l~~~i~~~~~~~kpiLG 79 (213) T PRK13172 14 LLSVARAFQYFD------ASVNLVS-------T-PEEIMSADRLVLPGVGAFEDGMKGLTTLNFIEPIKQFARSGKPFLG 79 (213) T ss_pred HHHHHHHHHHCC------CCEEEEC-------C-HHHHHHCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEE T ss_conf 999999999869------9889977-------9-9998338978976878469999988723863789998765995799 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCC---CC-CCCCCCCCCCEEEECCEEEEECCCC--- Q ss_conf 5576999999998751688999700035666641211501123465---30-0156554674023165257855870--- Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQ---QE-KRLPSDDLGATMRLGAYDVSLKEET--- 453 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~---~~-~~~~~~~~GGTMRLG~~~~~l~~~S--- 453 (544) T Consensus 80 ICLGmQlLf------------~~s~E~g~~~--GLgli~G~v~kl~~~~~~~~~~kvPh~GWn------~i~~~~~~~~~ 139 (213) T PRK13172 80 ICLGMQMML------------SKSTEFGQHE--GLGLIAGEVVSVPSHGVDGQLHKIPHIGWN------ELVSTSEGEDW 139 (213) T ss_pred EEHHHHHHH------------HCCCCCCCCC--CCCEECCEEEECCCCCCCCCCCCCCEECHH------HEECCCCCCCC T ss_conf 857666265------------3864687647--665755259877755666645627620144------53324554333 Q ss_pred ---HHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCC-EEEEEEECCCCEEEEEECCCCCCCCCCCCCHH Q ss_conf ---66886379847660252333278899899978959999869998-68999838998499972487732787698841 Q gi|254780195|r 454 ---LISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHA-LPEVVEYINHPWFIGVQYHPELKSRPLDPHPL 529 (544) Q Consensus 454 ---~~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~-lvEiiEl~~HpffvgvQfHPEf~Srp~~phPL 529 (544) T Consensus 140 ~~~l~~~~~~~~~f--YFvHSY~~~~~~------~~~~~a~~~y~g~~~~a~i~~---~Ni~G~QFHPE-KS~~-~Gl~l 206 (213) T PRK13172 140 CHTILKNIPLNSSV--YFVHSFMAMPSN------PKKRLADTLYDGQAISAVIKD---ENMYGCQFHPE-KSGE-VGLSI 206 (213) T ss_pred CCHHHCCCCCCCEE--EEEEEEEEECCC------CCCEEEEEEECCEEEEEEEEC---CCEEEEECCHH-HCCH-HHHHH T ss_conf 43666189778617--999877885388------873899999899999999988---99999808802-2368-69999 Q ss_pred HHHHHH Q ss_conf 589999 Q gi|254780195|r 530 FVSFIQ 535 (544) Q Consensus 530 F~~fi~ 535 (544) T Consensus 207 L~nFl~ 212 (213) T PRK13172 207 IQQFLQ 212 (213) T ss_pred HHHHHC T ss_conf 999972 |
|
| >cd01747 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.8e-11 Score=99.69 Aligned_cols=185 Identities=21% Similarity=0.267 Sum_probs=99.3 Q ss_pred HCCCCHHHH--HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHH----HHHHC Q ss_conf 014813468--888888888787367241677225656723445662169839973777865501688899----88740 Q gi|254780195|r 300 YIHLKDAYR--SLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIAAI----KFARE 373 (544) Q Consensus 300 Y~~l~DaY~--Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai----~yARe 373 (544) T Consensus 13 ~~~~~~sYIaASYVK~lEsa----GArVVPI~~~~~~---~~~~~l~~~INGvLfpGG~~~~~~s~y~~~~~~i~~~A~e 85 (273) T cd01747 13 SNKTGHSYIAASYVKFLESA----GARVVPIWINESE---EYYDKLFKSINGILFPGGAVDIDTSGYARTAKIIYNLALE 85 (273) T ss_pred CCCCCCEEEEHHHHHHHHHC----CCEEEEEECCCCH---HHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH T ss_conf 56678747608989999978----9869987469998---9999998754679967866205667089999999999999 Q ss_pred C-----CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEE Q ss_conf 4-----76322355769999999987516889997000356666412115011234653001565546740231652578 Q gi|254780195|r 374 N-----KIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVS 448 (544) Q Consensus 374 n-----~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~ 448 (544) T Consensus 86 ~Nd~G~yFPiwGtCLGFelL~~~~s~~~-----~~l~~~~s~-n---~~~pL~ft~~~~~-----Srlf~---------- 141 (273) T cd01747 86 RNDAGDYFPVWGTCLGFELLTYLTSGET-----LLLEATEAT-N---SALPLNFTEDALQ-----SRLFK---------- 141 (273) T ss_pred HHCCCCCCCEEEEHHHHHHHHHHHCCCC-----CEECCCCCC-C---CCCCCCCCCCCCC-----CHHHH---------- T ss_conf 8508995633333030999999973996-----123102677-7---3301014467644-----63765---------- Q ss_pred ECCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHH--HHCCCEEEEECCC--C-CEEEEEEECCCCEEEEEECCCC Q ss_conf 5587066886379847660252333278899899--9789599998699--9-8689998389984999724877 Q gi|254780195|r 449 LKEETLISRIYGLDLIPERHRHRYEVNVRYREKL--EGCGLKFSGFSVD--H-ALPEVVEYINHPWFIGVQYHPE 518 (544) Q Consensus 449 l~~~S~~~~iYg~~~I~ERHRHRYEvN~~y~~~l--e~~Gl~~sg~~~d--~-~lvEiiEl~~HpffvgvQfHPE 518 (544) T Consensus 142 ~~~~~l~~~l~~~~~t--~n~H~~gitp~~f~~~~~L~~~f~ilstn~D~~g~eFVStiE~k~YP~y-g~QfHPE 213 (273) T cd01747 142 RFPPDLLKSLATEPLT--MNNHRYGISPENFTENGLLSDFFNVLTTNDDWNGVEFISTVEAYKYPIY-GVQWHPE 213 (273) T ss_pred CCCHHHHHHHHHCCCC--HHHHCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEEECCCCCEE-EEEECCC T ss_conf 1999999998507600--4330541678887456888744265687765999889886303247646-6740687 |
Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase. gamma-Glutamyl Hydrolase catalyzes the cleavage of the gamma-glutamyl chain of folylpoly-gamma-glutamyl substrates and is a central enzyme in folyl and antifolyl poly-gamma-glutamate metabolism. GATase activity involves the removal of the ammonia group from a glutamate molecule and its subsequent transfer to a specific substrate, thus creating a new carbon-nitrogen group on the substrate. gamma-Glutamyl hydrolases belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. |
| >PRK13566 anthranilate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.1e-10 Score=94.43 Aligned_cols=196 Identities=18% Similarity=0.194 Sum_probs=116.8 Q ss_pred EHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCC Q ss_conf 52001481346888888888878736724167722565672344566216983997377786550168889988740476 Q gi|254780195|r 297 VGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFARENKI 376 (544) Q Consensus 297 VGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai~yARen~i 376 (544) T Consensus 522 ~g~rVLlVDn~DSFvhtLa~YlrqlGAeV~vvR~d---~~-~~~l~-~~~pD~vvlSPGPG~P~d~g~~~~i~~~~~~~i 596 (724) T PRK13566 522 SGKRVLLVDHEDSFVHTLANYFRQTGAEVTTVRYP---VA-EEILD-RVNPDLVVLSPGPGRPEDFDCKATIDAALARNL 596 (724) T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEECC---CC-HHHHH-HHCCCEEEECCCCCCCHHCCCHHHHHHHHHCCC T ss_conf 77579998465327999999999819879998189---87-67776-318898998799979000558599999985799 Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHH Q ss_conf 32235576999999998751688999700035666641211501123465300156554674023165257855870668 Q gi|254780195|r 377 PFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLIS 456 (544) Q Consensus 377 P~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~ 456 (544) T Consensus 597 PilGVCLGhQaI~eafGg~l~~-----------~~~p--------~H-------------GK~S-----~I~~~~~~~~F 639 (724) T PRK13566 597 PIFGVCLGLQAIVEAFGGELGQ-----------LAYP--------MH-------------GKPS-----RIRVRGPGLVF 639 (724) T ss_pred CEEEECCCHHHHHHHHCCEEEE-----------CCCC--------CC-------------CCEE-----EEEEECCCCCC T ss_conf 8799771276998974938854-----------5857--------88-------------9813-----57984897410 Q ss_pred HHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCC--CCCCCCHHHHHHH Q ss_conf 86379847660252333278899899978959999869998689998389984999724877327--8769884158999 Q gi|254780195|r 457 RIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKS--RPLDPHPLFVSFI 534 (544) Q Consensus 457 ~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~S--rp~~phPLF~~fi 534 (544) T Consensus 640 ~glp~~f~v~RY-HSL~v~~~~---l-P~~L~VTA~tedG-viMai~H~~lp-i~gVQFHPESIlT~~g~~G~~ii~N~~ 712 (724) T PRK13566 640 SGLPNEFTVGRY-HSLFADPER---L-PDELLVTAETEDG-VIMAIEHKTLP-VAAVQFHPESIMTLGGEVGLRIIENVV 712 (724) T ss_pred CCCCCCEEEEEE-EEEEECCCC---C-CCCEEEEEECCCC-EEEEEEECCCC-CEEEEECCHHHCCCCCCCCHHHHHHHH T ss_conf 789996078841-379862677---9-9833899985898-28988517876-125610767862288744399999999 Q ss_pred HHHHHHH Q ss_conf 9999876 Q gi|254780195|r 535 QATVLYS 541 (544) Q Consensus 535 ~Aal~~~ 541 (544) T Consensus 713 ~~~~~~~ 719 (724) T PRK13566 713 RLLARKA 719 (724) T ss_pred HHHHHHH T ss_conf 9986654 |
|
| >PRK09522 bifunctional anthranilate synthase/anthranilate phosphoribosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.3e-10 Score=94.19 Aligned_cols=183 Identities=17% Similarity=0.185 Sum_probs=98.5 Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHH--CCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHH Q ss_conf 813468888888888787367241677225656723445662--169839973777865501688899887404763223 Q gi|254780195|r 303 LKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHF--YGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLG 380 (544) Q Consensus 303 l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L--~~~dGIlVPGGFG~RGieGkI~Ai~yARen~iP~LG 380 (544) T Consensus 6 lIDNyDSFTyNL~~~l~~~g~~v~V~rnd~~~---~~~~e~~~~~~p~~IVlSPGPG~P~dag~~~~ii~~~~~~iPILG 82 (531) T PRK09522 6 LLDNIDSFTYNLADQLRSNGHNVVIYRNHIPA---QTLIERLATMSNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIG 82 (531) T ss_pred EEECCCCHHHHHHHHHHHCCCCEEEEECCCCC---CCCHHHHHHCCCCEEEECCCCCCCHHCCCHHHHHHHHCCCCCEEE T ss_conf 98288862889999998669956999699831---301999972495969989999890236573999998659999899 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHH-HHH Q ss_conf 5576999999998751688999700035666641211501123465300156554674023165257855870668-863 Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLIS-RIY 459 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~-~iY 459 (544) T Consensus 83 ICLGhQ~ia~~~Gg~v~---~a~~~~H-----------------------------Gk~-----s~i~~-~~~~lF~glp 124 (531) T PRK09522 83 ICLGHQAIVEAYGGYVG---QAGEILH-----------------------------GKA-----SSIEH-DGQAMFAGLT 124 (531) T ss_pred ECHHHHHHHHHCCCEEE---ECCCCCC-----------------------------CEE-----EEEEE-CCCCCCCCCC T ss_conf 87877899997298896---7798432-----------------------------336-----56798-9852028999 Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 7984766025233327889989997895999986999868999838998499972487732787698841589999999 Q gi|254780195|r 460 GLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATV 538 (544) Q Consensus 460 g~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aal 538 (544) T Consensus 125 ~~~~v~-rY-HSl~~-----~~l-P~~l~v~A~~-~g-~iMai~h~~~pi~-GVQFHPESi~T~-~G~~il~NFLn~~~ 191 (531) T PRK09522 125 NPLPVA-RY-HSLVG-----SNI-PAGLTINAHF-NG-MVMAVRHDADRVC-GFQFHPESILTT-QGARLLEQTLAWAQ 191 (531) T ss_pred CCCEEE-EE-CEECC-----CCC-CCCEEEEEEE-CC-EEEEEEECCCCEE-EEEECCCCCCCC-CHHHHHHHHHCCCC T ss_conf 997799-64-43304-----479-9987999716-99-9999998999869-982087546887-77999999856543 |
|
| >PRK13142 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.2e-11 Score=102.70 Aligned_cols=167 Identities=23% Similarity=0.388 Sum_probs=84.1 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC--CCC-------CCCHHHHHHHHHHHCCCCC Q ss_conf 6888888888878736724167722565672344566216983997377--786-------5501688899887404763 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG--FGK-------RGSEGKIAAIKFARENKIP 377 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG--FG~-------RGieGkI~Ai~yARen~iP 377 (544) T Consensus 12 i~Sv~~al~~lg~----~--~~i~-------~~-~~~i~~~d~lILPGVGsF~~am~~L~~~~l~---~~i~~--~~~kp 72 (192) T PRK13142 12 ISNVKRAIEHLGY----E--VVVS-------NT-SKIIDQAETIILPGVGHFKDAMSEIKRLNLN---AILAK--NTDKK 72 (192) T ss_pred HHHHHHHHHHCCC----C--EEEE-------CC-HHHHHHCCEEEECCCCCHHHHHHHHHHCCHH---HHHHH--HCCCC T ss_conf 9999999998599----8--7996-------89-9998437958975768789999998875859---99998--62898 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHH Q ss_conf 22355769999999987516889997000356666412115011234653001565546740231652578558706688 Q gi|254780195|r 378 FLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISR 457 (544) Q Consensus 378 ~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~ 457 (544) T Consensus 73 iLGICLGMQlL~------------~~SeE-g~~--~GLgli~G~V~kl--~~~~~vPhmGWn------~v~~~-~~~~-- 126 (192) T PRK13142 73 MIGICLGMQLMY------------EHSDE-GDA--SGLGFIPGNISRI--QTEYPVPHLGWN------NLVSK-HPML-- 126 (192) T ss_pred EEEEECCEEEEE------------CCCCC-CCC--CCCCEEEEEEEEE--CCCCCCCEECCH------HHCCC-CCCC-- T ss_conf 589650101431------------14555-676--7757786899983--689978665815------62533-8542-- Q ss_pred HHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH Q ss_conf 6379847660252333278899899978959999869998689998389984999724877327876988415899999 Q gi|254780195|r 458 IYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQA 536 (544) Q Consensus 458 iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~A 536 (544) T Consensus 127 --~~~-f--YFvHSY~~~~------~~~--~~a~t~yg~~f~s~v~~~N---i~G~QFHPE-KS~~-~Gl~lLknFl~g 187 (192) T PRK13142 127 --NQD-V--YFVHSYQAPM------SEN--VIAYAQYGADIPAIVQFNN---YIGIQFHPE-KSGT-YGLQILRQAIQG 187 (192) T ss_pred --CCC-E--EEEEEEECCC------CCC--EEEEEECCCEEEEEEEECC---EEEEECCHH-HCCH-HHHHHHHHHHCC T ss_conf --364-4--7998765278------757--8999988996999999599---999958812-3558-589999999634 |
|
| >PRK05637 anthranilate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.1e-10 Score=92.84 Aligned_cols=184 Identities=18% Similarity=0.195 Sum_probs=92.0 Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH Q ss_conf 13468888888888787367241677225656723445662169839973777865501688899887404763223557 Q gi|254780195|r 304 KDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLGICF 383 (544) Q Consensus 304 ~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai~yARen~iP~LGICl 383 (544) T Consensus 7 IDnyDSFT~Nl~~~l~~~g~~v~V~r-n~~~~~~----~~~~~pd~ivlSPGPg~P~d~g~~~~~~~~~~~~iPILGICL 81 (208) T PRK05637 7 IDNHDSFVYNLVDAFAVAGYKCTVFR-NTVPVET----ILAANPDLICLSPGPGYPADAGNMMALIERTLGQIPLLGICL 81 (208) T ss_pred EECCCCHHHHHHHHHHHCCCEEEEEE-CCCCHHH----HHHCCCCEEEECCCCCCHHHCCCHHHHHHHHHCCCCEEEHHH T ss_conf 94889759999999986799079996-9999999----985199959999999995777574999999735698221147 Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHH---- Q ss_conf 6999999998751688999700035666641211501123465300156554674023165257855870668863---- Q gi|254780195|r 384 GMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIY---- 459 (544) Q Consensus 384 GmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iY---- 459 (544) T Consensus 82 GhQ~i~~~~Gg~v~---~~~--~~----------------------------HG~~s-----~i~~~~~g~~~~lf~gl~ 123 (208) T PRK05637 82 GYQALIEYHGGKVE---PCG--PV----------------------------HGTTD-----NMILTDAGVQSPVFAGLA 123 (208) T ss_pred HHHHHHHHCCCEEE---CCC--CC----------------------------CCEEE-----EEEECCCCCCCCCCCCCC T ss_conf 78999997097883---067--76----------------------------55066-----789878888770006887 Q ss_pred -----------CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEE--ECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCC Q ss_conf -----------79847660252333278899899978959999--86999868999838998499972487732787698 Q gi|254780195|r 460 -----------GLDLIPERHRHRYEVNVRYREKLEGCGLKFSG--FSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDP 526 (544) Q Consensus 460 -----------g~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg--~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~p 526 (544) T Consensus 124 ~~~~~~~~~~~~~~~~v~rY-HSl~~~-----~-~p~~~~~~~~~~~~~~~viMa~~h~~~p~~-GVQFHPESi~T~-~G 194 (208) T PRK05637 124 TDVEPDHPEIPGRKVPIGRY-HSLGCV-----V-APDGIESLGTCSSEIGDVIMAARTTDGKAI-GLQFHPESVLSP-TG 194 (208) T ss_pred CCCCCCCCCCCCCCCEEEEE-CCCEEE-----E-CCCCCEEEEEEECCCCCEEEEEEECCCCEE-EEEECCCCCCCC-CH T ss_conf 65544553456775357710-601671-----0-799974889997599999999997899979-986697536887-77 Q ss_pred CHHHHHHHHHHHH Q ss_conf 8415899999998 Q gi|254780195|r 527 HPLFVSFIQATVL 539 (544) Q Consensus 527 hPLF~~fi~Aal~ 539 (544) T Consensus 195 ~~il~nfv~~~~~ 207 (208) T PRK05637 195 PVILSRCVEQLLA 207 (208) T ss_pred HHHHHHHHHHHHC T ss_conf 9999999999961 |
|
| >TIGR01823 PabB-fungal para-aminobenzoate synthase; InterPro: IPR010117 This entry represents the fungal clade of para-aminobenzoate synthase, which acts on chorismate to form para-aminobenzoic acid (PABA), a precursor of folate | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.6e-10 Score=91.21 Aligned_cols=219 Identities=18% Similarity=0.262 Sum_probs=132.6 Q ss_pred HCCCCHHHHHHHHHHHHHHHHHC---CCCCEEEECCCCCC-CCCHHHHHCCCCEEEECCCCCCC--CCH--HHHHHHHHH Q ss_conf 01481346888888888878736---72416772256567-23445662169839973777865--501--688899887 Q gi|254780195|r 300 YIHLKDAYRSLIEALRHSGVSNY---TKVQLSWIDAETLE-KEDPVKHFYGVHGILVPGGFGKR--GSE--GKIAAIKFA 371 (544) Q Consensus 300 Y~~l~DaY~Si~EAL~hA~~~~~---~kv~i~wIdse~le-~~~~~~~L~~~dGIlVPGGFG~R--Gie--GkI~Ai~yA 371 (544) T Consensus 10 ~ID~YDSftyNvv~lle~~~d~~PGvnav~V~tvhsD~~~sm~~l~e~l~~FdAiVvGPGPG~PN~GA~d~gI~~~~-w~ 88 (851) T TIGR01823 10 FIDAYDSFTYNVVALLEKALDVRPGVNAVSVITVHSDKFDSMDDLLELLLLFDAIVVGPGPGDPNVGAKDVGILREV-WE 88 (851) T ss_pred EEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHH-HH T ss_conf 78701101689999999874158774468999970687235346888874178589888776776511444688999-97 Q ss_pred HC----CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC-CCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEE Q ss_conf 40----4763223557699999999875168899970003566-664121150112346530015655467402316525 Q gi|254780195|r 372 RE----NKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEA-GVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYD 446 (544) Q Consensus 372 Re----n~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~-~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~ 446 (544) T Consensus 89 l~~Gk~D~~Pv~GICLGFQslcL--------~qGa~i~rlpn~p~HGqV~~~~t~~~--~if~--g~~~--------GyP 148 (851) T TIGR01823 89 LANGKLDEVPVLGICLGFQSLCL--------YQGADIERLPNLPLHGQVYEVKTSDA--AIFE--GVSS--------GYP 148 (851) T ss_pred HCCCCCCCCCCCCHHHHHHHHHH--------HCCCCHHHCCCCCCCCEEEEEEECCH--HHHC--CCCC--------CCC T ss_conf 32895313551100156899998--------55882356178865743788874011--5552--4114--------788 Q ss_pred EEECCCCHHHHHHC-CCEEEEECCCCCCCCHHHHHHHHHCC----CEEEEECCCCCEEEEEEECCCCEEEEEECCCC-CC Q ss_conf 78558706688637-98476602523332788998999789----59999869998689998389984999724877-32 Q gi|254780195|r 447 VSLKEETLISRIYG-LDLIPERHRHRYEVNVRYREKLEGCG----LKFSGFSVDHALPEVVEYINHPWFIGVQYHPE-LK 520 (544) Q Consensus 447 ~~l~~~S~~~~iYg-~~~I~ERHRHRYEvN~~y~~~le~~G----l~~sg~~~d~~lvEiiEl~~HpffvgvQfHPE-f~ 520 (544) T Consensus 149 d-tvk~trYHSLyan~~~id~strGvdsGnPq-adrfaskdldLL~~~l~ed~e~~i~Ms~~~~k~P~f-Gv~yHPESc~ 225 (851) T TIGR01823 149 D-TVKSTRYHSLYANKESIDSSTRGVDSGNPQ-ADRFASKDLDLLALILLEDEEDQILMSVKAKKKPIF-GVQYHPESCK 225 (851) T ss_pred C-CEEEEEEEEEEECCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCEE-EEEECCCCCC T ss_conf 6-322445578873178865332555678850-123343236789988622688812200310588774-5650564334 Q ss_pred CCCCCCCHHHHHHHHHHHHHHH Q ss_conf 7876988415899999998764 Q gi|254780195|r 521 SRPLDPHPLFVSFIQATVLYSQ 542 (544) Q Consensus 521 Srp~~phPLF~~fi~Aal~~~~ 542 (544) T Consensus 226 S~~~a~~kl~~nfl~la~~~N~ 247 (851) T TIGR01823 226 SEKEASVKLLKNFLKLALINNV 247 (851) T ss_pred CCHHHHHHHHHHHHHHHHCCCC T ss_conf 5545789999999987401672 |
. |
| >TIGR00566 trpG_papA glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase; InterPro: IPR006221 This entry presents the glutamine amidotransferase domain or peptide of the tryptophan-biosynthetic pathway enzyme anthranilate synthase or of the folate biosynthetic pathway enzyme para-aminobenzoate synthase | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.5e-09 Score=87.92 Aligned_cols=186 Identities=20% Similarity=0.286 Sum_probs=103.6 Q ss_pred HHHHHHHHHHHHHHHHHC------CCCCEEEECCCCCCCCCHHHHHC-CCCEEEECCCCCC---CCCH-HHHH-HHHHHH Q ss_conf 346888888888878736------72416772256567234456621-6983997377786---5501-6888-998874 Q gi|254780195|r 305 DAYRSLIEALRHSGVSNY------TKVQLSWIDAETLEKEDPVKHFY-GVHGILVPGGFGK---RGSE-GKIA-AIKFAR 372 (544) Q Consensus 305 DaY~Si~EAL~hA~~~~~------~kv~i~wIdse~le~~~~~~~L~-~~dGIlVPGGFG~---RGie-GkI~-Ai~yAR 372 (544) T Consensus 6 DnYDSFTYNlv~~~~~~gdisPGv~~V~Vkrnd~~~~~~ie~L~P~~~lfdaivisPGPC~P~eAa~~~Gii~~~i~h~a 85 (212) T TIGR00566 6 DNYDSFTYNLVQYFEELGDISPGVAEVVVKRNDSLTLQEIEALLPLLPLFDAIVISPGPCTPNEAAISMGIILEAIRHFA 85 (212) T ss_pred ECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCHHHCCHHHHHHHHHHHC T ss_conf 56742378999986421776736105777206731034587631135633456765865683212204117999987423 Q ss_pred C--CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEEC Q ss_conf 0--47632235576999999998751688999700035666641211501123465300156554674023165257855 Q gi|254780195|r 373 E--NKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLK 450 (544) Q Consensus 373 e--n~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~ 450 (544) T Consensus 86 GkldevPILGvCLG~QA~~qA~Gg~V~~---a-----~~-------~~H-----------------Gk-----~s~i~hn 128 (212) T TIGR00566 86 GKLDEVPILGVCLGHQALAQAFGGDVVR---A-----NT-------VMH-----------------GK-----TSEIEHN 128 (212) T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCCEEE---E-----CC-------CCC-----------------CC-----CCCEEEC T ss_conf 7622676020105568788742872254---2-----11-------368-----------------73-----0012477 Q ss_pred CCCHHHHHH---C-CCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCC-CEEEEEEECCCCEEEEEECCCCC-CCCCC Q ss_conf 870668863---7-984766025233327889989997895999986999-86899983899849997248773-27876 Q gi|254780195|r 451 EETLISRIY---G-LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDH-ALPEVVEYINHPWFIGVQYHPEL-KSRPL 524 (544) Q Consensus 451 ~~S~~~~iY---g-~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~-~lvEiiEl~~HpffvgvQfHPEf-~Srp~ 524 (544) T Consensus 129 g~~~f~GL~~GyPP~~L~~TRY-HSL~V~p~~l~~~----~~~~~~~~~~G~eiM~irh~~~p~e-GVQFHPESilS--e 200 (212) T TIGR00566 129 GAGIFRGLFNGYPPDTLTATRY-HSLVVEPETLPTC----FQVTALEEENGIEIMAIRHRDLPLE-GVQFHPESILS--E 200 (212) T ss_pred CCEEECCCCCCCCCCCCCCCCE-EEEEECCCCCCCC----CCEEEEECCCCCEEEHHHHCCCCCC-CEEECCHHHHH--H T ss_conf 7101246557768664435750-5566744577622----0101000168701310133478502-20107135534--2 Q ss_pred CCCHHHHHHHH Q ss_conf 98841589999 Q gi|254780195|r 525 DPHPLFVSFIQ 535 (544) Q Consensus 525 ~phPLF~~fi~ 535 (544) T Consensus 201 ~G~~ll~Nfl~ 211 (212) T TIGR00566 201 LGHQLLANFLH 211 (212) T ss_pred HHHHHHHHHHC T ss_conf 27899998723 |
In at least one case, a single polypeptide from Bacillus subtilis was shown to have both functions. ; GO: 0004049 anthranilate synthase activity, 0008152 metabolic process. |
| >COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.1e-08 Score=80.01 Aligned_cols=183 Identities=21% Similarity=0.249 Sum_probs=101.2 Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHH-HHHHHHHHHCCCCCHHHHH Q ss_conf 134688888888887873672416772256567234456621698399737778655016-8889988740476322355 Q gi|254780195|r 304 KDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEG-KIAAIKFARENKIPFLGIC 382 (544) Q Consensus 304 ~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieG-kI~Ai~yARen~iP~LGIC 382 (544) T Consensus 7 IDNyDSFtyNLv~yl~~lg~~v~V~rnd--~~~~~-~~~-~~~pd~iviSPGPG~P~d~G~~~~~i~~~-~~~~PiLGVC 81 (191) T COG0512 7 IDNYDSFTYNLVQYLRELGAEVTVVRND--DISLE-LIE-ALKPDAIVISPGPGTPKDAGISLELIRRF-AGRIPILGVC 81 (191) T ss_pred EECCCCHHHHHHHHHHHCCCCEEEEECC--CCCHH-HHH-HCCCCEEEECCCCCCHHHCCHHHHHHHHH-CCCCCEEEEC T ss_conf 9774424999999999739934999889--65877-886-04999899848997937736189999986-0899889987 Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCC Q ss_conf 76999999998751688999700035666641211501123465300156554674023165257855870668863798 Q gi|254780195|r 383 FGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLD 462 (544) Q Consensus 383 lGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~ 462 (544) T Consensus 82 LGHQai~~~fGg~V~~a-----------~~~--------~H-------------G------K~s~i~h~g~~iF~glp~~ 123 (191) T COG0512 82 LGHQAIAEAFGGKVVRA-----------KEP--------MH-------------G------KTSIITHDGSGLFAGLPNP 123 (191) T ss_pred CCHHHHHHHHCCEEEEC-----------CCC--------CC-------------C------EEEEEECCCCCCCCCCCCC T ss_conf 43789999739788755-----------977--------67-------------8------1255402996001579998 Q ss_pred EEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH Q ss_conf 47660252333278899899978959999869998689998389984999724877327876988415899999 Q gi|254780195|r 463 LIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQA 536 (544) Q Consensus 463 ~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~A 536 (544) T Consensus 124 f~v~RY-HSLvv~~~~l----P~~l~vtA~~~d~~~IMai~h~~~pi~-gvQFHPESilT-~~G~~il~Nfl~~ 190 (191) T COG0512 124 FTVTRY-HSLVVDPETL----PEELEVTAESEDGGVIMAVRHKKLPIY-GVQFHPESILT-EYGHRILENFLRL 190 (191) T ss_pred CEEEEE-EEEEECCCCC----CCCEEEEEEECCCCEEEEEEECCCCEE-EEECCCCCCCC-CCHHHHHHHHHHH T ss_conf 888862-7898447879----983389999689987988860899878-88208710366-2148999999844 |
|
| >KOG1224 consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.4e-08 Score=79.74 Aligned_cols=198 Identities=23% Similarity=0.345 Sum_probs=105.6 Q ss_pred CCEEEEEEHHHCCCCHHHH-HHHHHHHHHH-HHHCCCCCEEEECCCCCCCCCHHHHHC---CCCEEEECCCCCCC-CCHH Q ss_conf 4379999520014813468-8888888887-873672416772256567234456621---69839973777865-5016 Q gi|254780195|r 290 NEVKVAIVGKYIHLKDAYR-SLIEALRHSG-VSNYTKVQLSWIDAETLEKEDPVKHFY---GVHGILVPGGFGKR-GSEG 363 (544) Q Consensus 290 ~~V~IaiVGKY~~l~DaY~-Si~EAL~hA~-~~~~~kv~i~wIdse~le~~~~~~~L~---~~dGIlVPGGFG~R-GieG 363 (544) T Consensus 13 ~rl~~LlID~Y----DSyTfNiy~ll~~~~~vp~V~~vh~~~~~~d~------~~~l~q~~~FDaIVVgPGPG~P~~a~d 82 (767) T KOG1224 13 PRLRTLLIDNY----DSYTFNIYQLLSTINGVPPVVIVHDEWTWEDA------YHYLYQDVAFDAIVVGPGPGSPMCAAD 82 (767) T ss_pred HHEEEEEEECC----CCHHHHHHHHHHHHCCCCCEEEEECCCCCHHH------HHHHHHCCCCCEEEECCCCCCCCCHHH T ss_conf 12028887124----54121399999874179967998343237789------998864002244896689979874788 Q ss_pred H-HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEE Q ss_conf 8-889988740476322355769999999987516889997000356666412115011234653001565546740231 Q gi|254780195|r 364 K-IAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRL 442 (544) Q Consensus 364 k-I~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRL 442 (544) T Consensus 83 ~gI~~rl~~~~~~iPilGICLGfQal~l--------~hGA~v~~~n~p~HGrvs-------------------------- 128 (767) T KOG1224 83 IGICLRLLLECRDIPILGICLGFQALGL--------VHGAHVVHANEPVHGRVS-------------------------- 128 (767) T ss_pred HHHHHHHHHHCCCCCEEEEEHHHHHHHH--------HCCCCEECCCCCCCCEEE-------------------------- T ss_conf 7899999986578864654321476765--------316611037876432466-------------------------- Q ss_pred CCEEEEECCCCHHHHH---HCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCC Q ss_conf 6525785587066886---3798476602523332788998999789599998699986899983899849997248773 Q gi|254780195|r 443 GAYDVSLKEETLISRI---YGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPEL 519 (544) Q Consensus 443 G~~~~~l~~~S~~~~i---Yg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf 519 (544) T Consensus 129 ---~i~~~~~~~f~gi~sg~~~~fK~~RY-HSL~in~~pid~l~---il~t~~ddng~ilMsi~~~~fPhf-G~qyHPES 200 (767) T KOG1224 129 ---GIEHDGNILFSGIPSGRNSDFKVVRY-HSLIINSLPIDLLP---ILWTIYDDNGHILMSIMHSSFPHF-GLQYHPES 200 (767) T ss_pred ---EEEECCCEEECCCCCCCCCCCEEEEE-EEEEECCCCHHHHC---CEEEEECCCCEEEEEEECCCCCCC-CEEECHHH T ss_conf ---67726847871577788664404776-77872577611212---013760688628987531578853-42337077 Q ss_pred CCCCCCCCHHHHHHHHHHHHH Q ss_conf 278769884158999999987 Q gi|254780195|r 520 KSRPLDPHPLFVSFIQATVLY 540 (544) Q Consensus 520 ~Srp~~phPLF~~fi~Aal~~ 540 (544) T Consensus 201 ~~s-~~g~~lfkNFl~lt~~~ 220 (767) T KOG1224 201 IAS-TYGSQLFKNFLDLTVNY 220 (767) T ss_pred HHH-HHHHHHHHHHHHHHCCC T ss_conf 531-34579998777763367 |
|
| >PRK05665 amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.4e-07 Score=72.50 Aligned_cols=161 Identities=19% Similarity=0.126 Sum_probs=84.4 Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC-CCCCCCHHH----HHHHHHHHCCCCCHHH Q ss_conf 46888888888878736724167722565672344566216983997377-786550168----8899887404763223 Q gi|254780195|r 306 AYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG-FGKRGSEGK----IAAIKFARENKIPFLG 380 (544) Q Consensus 306 aY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG-FG~RGieGk----I~Ai~yARen~iP~LG 380 (544) T Consensus 23 ~y~~mF~~ll~~~---~~~~~~~~~~v~~--ge~-P~~~~~~dg~vITGS~~~vyd~~pWi~~L~~~i~~~~~~~~pilG 96 (240) T PRK05665 23 GYGRMFEQLFARQ---PIAAEFVVYNVVQ--GDY-PADDEKFDAYLVTGSKADSFGTDPWIQTLKTYLLKLYERGDKLLG 96 (240) T ss_pred CHHHHHHHHHHHC---CCCCEEEEEEEEC--CCC-CCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE T ss_conf 9889999999618---9985599997006--879-989778789999589874689967699999999999876999899 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHH-HH Q ss_conf 55769999999987516889997000356666412115011234653001565546740231652578558706688-63 Q gi|254780195|r 381 ICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISR-IY 459 (544) Q Consensus 381 IClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~-iY 459 (544) T Consensus 97 ICfGHQli----A~-ALGG~V----~~~--------------------------~~Gw--~vG~~~~~~~~~~~~~~~~~ 139 (240) T PRK05665 97 VCFGHQLL----AL-LLGGKA----ERA--------------------------SQGW--GVGIHRYQLAAHAPWMSPAV 139 (240) T ss_pred EEHHHHHH----HH-HHCCEE----EEC--------------------------CCCC--EEEEEEEEECCCCCCCCCCC T ss_conf 94436888----88-609836----127--------------------------9973--66679988758774335875 Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCC Q ss_conf 7984766025233327889989997895999986999868999838998499972487732 Q gi|254780195|r 460 GLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELK 520 (544) Q Consensus 460 g~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~ 520 (544) T Consensus 140 ~~~~l~~~H--~D~V~-----~l-P~ga~~Lass~~c-p~q~~~~~~~--~~~~Q~HPEf~ 189 (240) T PRK05665 140 TELTLLISH--QDQVT-----AL-PEGATVIASSDFC-PNAAYHIRDQ--VLCFQGHPEFV 189 (240) T ss_pred CCCEEEEEE--CCEEE-----EC-CCCEEEEEECCCC-CHHHEECCCC--EEEEECCCCCC T ss_conf 640799772--24278-----57-9984899867998-3334262786--89991696879 |
|
| >KOG0623 consensus | Back alignment and domain information |
|---|
Probab=98.58 E-value=3.8e-08 Score=79.36 Aligned_cols=170 Identities=25% Similarity=0.348 Sum_probs=97.2 Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC--CCCC----CCHHHHHHHHHHHCCCCCHH Q ss_conf 46888888888878736724167722565672344566216983997377--7865----50168889988740476322 Q gi|254780195|r 306 AYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG--FGKR----GSEGKIAAIKFARENKIPFL 379 (544) Q Consensus 306 aY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG--FG~R----GieGkI~Ai~yARen~iP~L 379 (544) T Consensus 13 n~~si~nal~hlg~~i------~~v~~-------P-~DI~~a~rLIfPGVGnfg~~~D~L~~~Gf~eplr~YiesgkPfm 78 (541) T KOG0623 13 NVRSIRNALRHLGFSI------KDVQT-------P-GDILNADRLIFPGVGNFGPAMDVLNRTGFAEPLRKYIESGKPFM 78 (541) T ss_pred CHHHHHHHHHHCCCEE------EECCC-------C-HHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE T ss_conf 4788999998638365------54258-------1-22036743760386641278888764324789999986699747 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHCCC-CCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHH Q ss_conf 355769999999987516889997000356-6664121150112346530015655467402316525785587066886 Q gi|254780195|r 380 GICFGMQMAVIEAARNLAGIPNACSTEFSE-AGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRI 458 (544) Q Consensus 380 GIClGmQ~avIEfARnvlgl~dAnStEf~~-~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~i 458 (544) T Consensus 79 gicvGlQaL---F---------~gSvE~p~skGLgvipg~v~RFD~s~k----~VPhI------GWNsc~v~sd~effg~ 136 (541) T KOG0623 79 GICVGLQAL---F---------DGSVENPPSKGLGVIPGIVGRFDASAK----IVPHI------GWNSCQVGSDSEFFGD 136 (541) T ss_pred EEHHHHHHH---H---------CCCCCCCCCCCCCCCCCCEECCCCCCC----CCCCC------CCCCCCCCCCCCCCCC T ss_conf 631457998---6---------364437886764354440110357778----57745------6311545775200256 Q ss_pred HCCCEEEEECCCCCCC----CHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCC Q ss_conf 3798476602523332----78899899978959999869998689998389984999724877327 Q gi|254780195|r 459 YGLDLIPERHRHRYEV----NVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKS 521 (544) Q Consensus 459 Yg~~~I~ERHRHRYEv----N~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~S 521 (544) T Consensus 137 ~-------p~~~~YFVHSyl~~ek~~~len~~wkiat~kYG~--E~Fi~ai~knN~~AtQFHPE-KS 193 (541) T KOG0623 137 V-------PNRHVYFVHSYLNREKPKSLENKDWKIATCKYGS--ESFISAIRKNNVHATQFHPE-KS 193 (541) T ss_pred C-------CCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCC--HHHHHHHHCCCEEEEECCCC-CC T ss_conf 7-------8734999853113334567898773676404670--88999986076545752654-45 |
|
| >PRK03619 phosphoribosylformylglycinamidine synthase subunit I; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.7e-05 Score=56.47 Aligned_cols=178 Identities=26% Similarity=0.411 Sum_probs=101.2 Q ss_pred HHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCC--HHHH-------HHHHHHHCCCCCHHHH Q ss_conf 888888878736724167722565672344566216983997377786550--1688-------8998874047632235 Q gi|254780195|r 311 IEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGS--EGKI-------AAIKFARENKIPFLGI 381 (544) Q Consensus 311 ~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGi--eGkI-------~Ai~yARen~iP~LGI 381 (544) T Consensus 18 ~~Af~~~G~----~~~~v~~~d---------~~L~~~~~lv~pGGFSyGD~L~aGaia~~~~i~~~i~~f~~~g~~vLGI 84 (223) T PRK03619 18 AHAIRLAGA----EPVYVWHTD---------TDLDGVDAVVLPGGFSYGDYLRCGAIAAFAPVMQAVVEAAEKGKPVLGI 84 (223) T ss_pred HHHHHHCCC----CEEEEEECC---------CCCCCCCEEEECCCCCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCEEEE T ss_conf 999998699----569998447---------9876453899835005653455334765278999999998679977998 Q ss_pred HHHHHHHHHHHHHHCCCCC-CCCHHHCC--CCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEE-CCCCHHHH Q ss_conf 5769999999987516889-99700035--66664121150112346530015655467402316525785-58706688 Q gi|254780195|r 382 CFGMQMAVIEAARNLAGIP-NACSTEFS--EAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSL-KEETLISR 457 (544) Q Consensus 382 ClGmQ~avIEfARnvlgl~-dAnStEf~--~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l-~~~S~~~~ 457 (544) T Consensus 85 CNGfQiL~-e-----~gLlPga----L~~N~s~r----F~~r~v-----------------------~lkv~~~~s~f~~ 127 (223) T PRK03619 85 CNGFQILL-E-----AGLLPGA----LTRNENLK----FICRDV-----------------------KLRVENNDTAFTS 127 (223) T ss_pred CHHHHHHH-H-----CCCCCCC----CCCCCCCC----EEEEEE-----------------------EEEECCCCCCHHC T ss_conf 72789898-6-----4778862----10269998----798656-----------------------7886589840103 Q ss_pred HHCCC---EEEEECCC-CCCCCHHHHHHHHHCCCEEEEE----CCCCCEEEEEEECC-CCEEEEEECCCCCCCCCCCCC- Q ss_conf 63798---47660252-3332788998999789599998----69998689998389-984999724877327876988- Q gi|254780195|r 458 IYGLD---LIPERHRH-RYEVNVRYREKLEGCGLKFSGF----SVDHALPEVVEYIN-HPWFIGVQYHPELKSRPLDPH- 527 (544) Q Consensus 458 iYg~~---~I~ERHRH-RYEvN~~y~~~le~~Gl~~sg~----~~d~~lvEiiEl~~-HpffvgvQfHPEf~Srp~~ph- 527 (544) T Consensus 128 ~~~~g~~l~ipVAHgEGr~~~~~~~l~~l~~~~qi~~~Y~d~~NPNGS~~~IAGI~~~~GrvlgmMPHPERa~~~~~g~~ 207 (223) T PRK03619 128 RYEKGEVIRIPIAHGEGNYYADEETLKELEGNGQVVFRYVDETNPNGSVNDIAGICNENGNVLGLMPHPERAVEALLGSD 207 (223) T ss_pred CCCCCCEEEEEEECCCCCEECCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHEEECCCCCEEEECCCCCCCCCCCCCCC T ss_conf 78999889887244875335599999999978978999899999988964652858799999888899644635544786 Q ss_pred ---HHHHHHHHHHH Q ss_conf ---41589999999 Q gi|254780195|r 528 ---PLFVSFIQATV 538 (544) Q Consensus 528 ---PLF~~fi~Aal 538 (544) T Consensus 208 dG~~~f~s~v~~~~ 221 (223) T PRK03619 208 DGLKLFKSALDAWR 221 (223) T ss_pred CHHHHHHHHHHHHH T ss_conf 14999999999975 |
|
| >PRK01175 phosphoribosylformylglycinamidine synthase subunit I; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00084 Score=48.04 Aligned_cols=168 Identities=23% Similarity=0.352 Sum_probs=84.6 Q ss_pred HHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCC--CCCHHHHHHH-----------HHHHCCCC Q ss_conf 8888888878736724167722565672344566216983997377786--5501688899-----------88740476 Q gi|254780195|r 310 LIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGK--RGSEGKIAAI-----------KFARENKI 376 (544) Q Consensus 310 i~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~--RGieGkI~Ai-----------~yARen~i 376 (544) T Consensus 20 ~~~Af~~aG~----~~~~v~~~--dl~~~--~~~L~~~~~lv~pGGFSyGD~l~aG~~~a~~~~~~~~~~i~~f~-~~g~ 90 (255) T PRK01175 20 VFKSVRRSGG----EPEYVHIN--DLAAG--RKSVSDYDCLIIPGGFSAGDYIRAGAIFAARLKAVLGKDIREFI-DSGR 90 (255) T ss_pred HHHHHHHCCC----CEEEEEEE--ECCCC--CCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HCCC T ss_conf 9999998599----63899865--23367--66655554899737767643357518899986799999999999-6799 Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEE---CCCC Q ss_conf 3223557699999999875168899970003566664121150112346530015655467402316525785---5870 Q gi|254780195|r 377 PFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSL---KEET 453 (544) Q Consensus 377 P~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l---~~~S 453 (544) T Consensus 91 ~vLGICNGfQiL~------e~gLLPg~~~~--------~~L~~--N~s~rF~---------------~r~v~l~v~~~~~ 139 (255) T PRK01175 91 PIIGICNGFQVLM------ELGLIPAERPE--------IALTN--NESNRFE---------------CRYTYIKMTSEKC 139 (255) T ss_pred CEEEECCHHHHHH------HCCCCCCCCCC--------CCCCC--CCCCCEE---------------EEEEEEEEECCCH T ss_conf 6799801689999------75877899988--------02024--7999878---------------6787999944834 Q ss_pred HHHHHHCCCE--EEEECCC-CCCCC-HHHHHHHHHCCCEEEEE------------CCCCCE--EEEEEECCCCEEEEEEC Q ss_conf 6688637984--7660252-33327-88998999789599998------------699986--89998389984999724 Q gi|254780195|r 454 LISRIYGLDL--IPERHRH-RYEVN-VRYREKLEGCGLKFSGF------------SVDHAL--PEVVEYINHPWFIGVQY 515 (544) Q Consensus 454 ~~~~iYg~~~--I~ERHRH-RYEvN-~~y~~~le~~Gl~~sg~------------~~d~~l--vEiiEl~~HpffvgvQf 515 (544) T Consensus 140 ~f~~~~~~~~l~ipvAHgEGrf~~~~~~~l~~l~~n~qi~~rY~d~~G~~~~yp~NPNGS~~~IAGI~n~~G-rvlgmMP 218 (255) T PRK01175 140 IFVKNLGKGVFQVPVAHAEGRVAVSEDSVLKRLYENDQIVFRYVDENGVYDGYPWNPNGSIDNIAGITNETG-NVIGLMP 218 (255) T ss_pred HHHHCCCCCEEEEEEECCCCCEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHCEEECCCC-CEEEECC T ss_conf 666414897799875537685575898999999858965899966998645788899879767208678999-9988789 Q ss_pred CCC Q ss_conf 877 Q gi|254780195|r 516 HPE 518 (544) Q Consensus 516 HPE 518 (544) T Consensus 219 HPE 221 (255) T PRK01175 219 HPE 221 (255) T ss_pred CCC T ss_conf 963 |
|
| >KOG3179 consensus | Back alignment and domain information |
|---|
Probab=98.00 E-value=2e-05 Score=59.74 Aligned_cols=164 Identities=24% Similarity=0.295 Sum_probs=94.8 Q ss_pred HCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC----CCCCCCHHHHHHHHHH---H Q ss_conf 01481346888888888878736724167722565672344566216983997377----7865501688899887---4 Q gi|254780195|r 300 YIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG----FGKRGSEGKIAAIKFA---R 372 (544) Q Consensus 300 Y~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG----FG~RGieGkI~Ai~yA---R 372 (544) T Consensus 23 yGgy~nvfvsllg~-------ege~wd~frV~~gefP~---~~Dl~ky~gfvIsGS~~dAf~d~dWI--~KLcs~~kkld 90 (245) T KOG3179 23 YGGYFNVFVSLLGD-------EGEQWDLFRVIDGEFPQ---EEDLEKYDGFVISGSKHDAFSDADWI--KKLCSFVKKLD 90 (245) T ss_pred HCCHHHHHHHHHCC-------CCCEEEEEEEECCCCCC---HHHHHHHCEEEEECCCCCCCCCCHHH--HHHHHHHHHHH T ss_conf 15799999998613-------57215789985487887---44653415499957743333540699--99999999987 Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCC Q ss_conf 04763223557699999999875168899970003566664121150112346530015655467402316525785587 Q gi|254780195|r 373 ENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEE 452 (544) Q Consensus 373 en~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~ 452 (544) T Consensus 91 ~mkkkvlGICFGHQii----ar-a~Gg~-------------Vg-----------------ra~KG~~~~lg~-itivk~~ 134 (245) T KOG3179 91 FMKKKVLGICFGHQII----AR-AKGGK-------------VG-----------------RAPKGPDLGLGS-ITIVKDA 134 (245) T ss_pred HHCCCEEEEECCHHHH----HH-HHCCC-------------CC-----------------CCCCCCCCCCCC-EEEEEEC T ss_conf 5156647882117999----88-61781-------------10-----------------278887444342-3899852 Q ss_pred CHHHHHHC--CC--EEEEECCCCCCCCHHHHHHHH-HCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCC Q ss_conf 06688637--98--476602523332788998999-7895999986999868999838998499972487732787 Q gi|254780195|r 453 TLISRIYG--LD--LIPERHRHRYEVNVRYREKLE-GCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRP 523 (544) Q Consensus 453 S~~~~iYg--~~--~I~ERHRHRYEvN~~y~~~le-~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp 523 (544) T Consensus 135 ~~~~~yFG~~~~~l~IikcHqD--ev-------le~PE~a~llasSe~ce-ve~fs~~~~--~l~fQGHPEyn~ei 198 (245) T KOG3179 135 EKPEKYFGEIPKSLNIIKCHQD--EV-------LELPEGAELLASSEKCE-VEMFSIEDH--LLCFQGHPEYNKEI 198 (245) T ss_pred CCCHHHCCCCHHHHHHHHHCCC--CE-------ECCCCHHHHHCCCCCCC-EEEEEECCE--EEEECCCCHHHHHH T ss_conf 4616432643444218765310--14-------33774454300001152-578983453--79962882343999 |
|
| >cd03130 GATase1_CobB Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0017 Score=45.78 Aligned_cols=173 Identities=15% Similarity=0.135 Sum_probs=99.6 Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCC------HHHHHHHHHHHCCCCCHH Q ss_conf 46888888888878736724167722565672344566216983997377786550------168889988740476322 Q gi|254780195|r 306 AYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGS------EGKIAAIKFARENKIPFL 379 (544) Q Consensus 306 aY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGi------eGkI~Ai~yARen~iP~L 379 (544) T Consensus 12 yY~enl~~L~~~G------aelv~FSPl~--d----~~lP~~d~lylgGGyPE~~a~~Ls~N~~~~~~ir~~~~~G~Piy 79 (198) T cd03130 12 YYPENLELLEAAG------AELVPFSPLK--D----EELPDADGLYLGGGYPELFAEELSANQSMRESIRAFAESGGPIY 79 (198) T ss_pred ECHHHHHHHHHCC------CEEEEECCCC--C----CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE T ss_conf 5799999999889------9789877767--8----88998768982799875889999767999999999998499779 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHH Q ss_conf 35576999999998751688999700035666641211501123465300156554674023165257855870668863 Q gi|254780195|r 380 GICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIY 459 (544) Q Consensus 380 GIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iY 459 (544) T Consensus 80 AECGGlMyL----~~~---i~~~-----~G~~~~M~Gllp~~~------------~m~~rl~lGY~~~~~~~~~~~~~~g 135 (198) T cd03130 80 AECGGLMYL----GES---LDDE-----EGQSYPMAGVLPGDA------------RMTKRLGLGYREAEALGDTLLGKKG 135 (198) T ss_pred EECHHHHHH----HHH---CCCC-----CCCEEEEEEEEEEEE------------EECCCCCCCEEEEEECCCCCCCCCC T ss_conf 982048887----422---0558-----998975021151688------------9777632563899982786223799 Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCC--EEEEEEECCCCEEEEEECCCCCCCCCC Q ss_conf 79847660252333278899899978959999869998--689998389984999724877327876 Q gi|254780195|r 460 GLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHA--LPEVVEYINHPWFIGVQYHPELKSRPL 524 (544) Q Consensus 460 g~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~--lvEiiEl~~HpffvgvQfHPEf~Srp~ 524 (544) T Consensus 136 ~~lrGHEFHyS~~~~~~~~-------~~~~~~~~~~g~~~~~~G~~~~---n~~asY~H~h~~~~p~ 192 (198) T cd03130 136 TTLRGHEFHYSRLEPPPEP-------DFAATVRRGRGIDGGEDGYVYG---NVLASYLHLHWASNPD 192 (198) T ss_pred CEEEEEEEEEEEEECCCCC-------CCEEEEEECCCCCCCCCEEEEC---CEEEEEEEECCCCCHH T ss_conf 6888777551040318987-------5207998156998882789989---9999987867873957 |
Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase. CobB plays a role in cobalamin biosythesis catalyzing the conversion of cobyrinic acid to cobyrinic acid a,c-diamide. CobB belongs to the triad family of amidotransferases. Two of the three residues of the catalytic triad that are involved in glutamine binding, hydrolysis and transfer of the resulting ammonia to the acceptor substrate in other triad aminodotransferases are conserved in CobB. |
| >PRK05368 homoserine O-succinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.031 Score=36.69 Aligned_cols=185 Identities=19% Similarity=0.269 Sum_probs=104.4 Q ss_pred CCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCH-HH------------HHCCCCEEEECCC- Q ss_conf 437999952001481346888888888878736724167722565672344-56------------6216983997377- Q gi|254780195|r 290 NEVKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDP-VK------------HFYGVHGILVPGG- 355 (544) Q Consensus 290 ~~V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~-~~------------~L~~~dGIlVPGG- 355 (544) T Consensus 34 RpL~I~iLNLMP~K~~TE~Q~lRlL~----~tplqv~~~~~~~~sh~~k~t~~~hl~~fY~~f~~ik~~~~DGlIITGAP 109 (302) T PRK05368 34 RPLKIGILNLMPKKIETETQFLRLLG----NTPLQVDLHLLRIDSHESKNTPAEHLNNFYRTFEDIKDQKFDGLIVTGAP 109 (302) T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHC----CCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCC T ss_conf 43136877078970899999999837----98735899998734446899879999999764999965877669972898 Q ss_pred -----CCC-CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCC Q ss_conf -----786-55016888998874047632235576999999998751688999700035666641211501123465300 Q gi|254780195|r 356 -----FGK-RGSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEK 429 (544) Q Consensus 356 -----FG~-RGieGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~ 429 (544) T Consensus 110 vE~l~Fe~V~YW~El~~I~dws~~~v~stl~iCWaA~AaL~----~~ygI~K~--------------~l~~K-------- 163 (302) T PRK05368 110 VELLPFEDVDYWDELREILDWAKTHVTSTLFICWAAQAALY----HLYGIPKY--------------TLPEK-------- 163 (302) T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHH----HHHCCCCE--------------ECCCC-------- T ss_conf 77788553741999999999998626522567499999999----97099710--------------06873-------- Q ss_pred CCCCCCCCCEEEECCEEEE-ECCCCHHHHHHCCCEEEEEC-CCCCCCCHHHHHHHHH-CCCEEEEECCCCCEEEEEEECC Q ss_conf 1565546740231652578-55870668863798476602-5233327889989997-8959999869998689998389 Q gi|254780195|r 430 RLPSDDLGATMRLGAYDVS-LKEETLISRIYGLDLIPERH-RHRYEVNVRYREKLEG-CGLKFSGFSVDHALPEVVEYIN 506 (544) Q Consensus 430 ~~~~~~~GGTMRLG~~~~~-l~~~S~~~~iYg~~~I~ERH-RHRYEvN~~y~~~le~-~Gl~~sg~~~d~~lvEiiEl~~ 506 (544) T Consensus 164 -----------~fGVf~h~~~~~~~pL~rGfdd~-f~~PhSR~-tei~---~~~i~~~~~L~ILa~s~e~G-~~l~~s~~ 226 (302) T PRK05368 164 -----------LSGVFEHRVLVPHHPLLRGFDDS-FLVPHSRY-TEVR---EEDIRAATGLEILAESEEAG-VYLFASKD 226 (302) T ss_pred -----------EEEEECCCCCCCCCHHHCCCCCC-CCCCCCCC-CCCC---HHHHHHCCCCEEEECCCCCC-CEEEECCC T ss_conf -----------58751223468998001378765-30674122-3689---99995088967986367777-16998289 Q ss_pred CCEEEEEECCCCCCCC Q ss_conf 9849997248773278 Q gi|254780195|r 507 HPWFIGVQYHPELKSR 522 (544) Q Consensus 507 HpffvgvQfHPEf~Sr 522 (544) T Consensus 227 ~r-~vfi~GH~EYd~~ 241 (302) T PRK05368 227 KR-IVFVTGHPEYDAD 241 (302) T ss_pred CC-EEEEECCCCCCHH T ss_conf 88-6888278666754 |
|
| >pfam04204 HTS Homoserine O-succinyltransferase | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.033 Score=36.55 Aligned_cols=185 Identities=20% Similarity=0.288 Sum_probs=102.4 Q ss_pred CCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCH-HH------------HHCCCCEEEECCC- Q ss_conf 437999952001481346888888888878736724167722565672344-56------------6216983997377- Q gi|254780195|r 290 NEVKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDP-VK------------HFYGVHGILVPGG- 355 (544) Q Consensus 290 ~~V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~-~~------------~L~~~dGIlVPGG- 355 (544) T Consensus 33 RpL~I~iLNLMP~K~~TE~Q~lRlL~----ntplqv~v~~~~~~sh~~knt~~~hl~~fY~~f~~ik~~~~DGlIITGAP 108 (298) T pfam04204 33 RPLRIGILNLMPKKIETETQLLRLLG----NTPLQVEVTLLRMSSHESKNTPAEHLESFYRTFDEIKDEKFDGLIITGAP 108 (298) T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHC----CCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCC T ss_conf 43125777068983899999999857----88744899998734446899878999999871999965887569972898 Q ss_pred -----CCC-CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCC Q ss_conf -----786-55016888998874047632235576999999998751688999700035666641211501123465300 Q gi|254780195|r 356 -----FGK-RGSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEK 429 (544) Q Consensus 356 -----FG~-RGieGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~ 429 (544) T Consensus 109 vE~l~FeeV~YW~El~~I~dWs~~~v~Stl~iCWaAqAaL~----~~ygI~K~--------------~l~~K-------- 162 (298) T pfam04204 109 VEHLPFEDVDYWEELTEIMDWSKTNVTSTLHICWGAQAALY----HFYGIPKH--------------LLPEK-------- 162 (298) T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHH----HHHCCCCC--------------CCCCC-------- T ss_conf 77788553741999999999998625440457499999999----98199800--------------17874-------- Q ss_pred CCCCCCCCCEEEECCEEEEE-CCCCHHHHHHCCCEEEEECCCCC-CCCHHHHHHHH-HCCCEEEEECCCCCEEEEEEECC Q ss_conf 15655467402316525785-58706688637984766025233-32788998999-78959999869998689998389 Q gi|254780195|r 430 RLPSDDLGATMRLGAYDVSL-KEETLISRIYGLDLIPERHRHRY-EVNVRYREKLE-GCGLKFSGFSVDHALPEVVEYIN 506 (544) Q Consensus 430 ~~~~~~~GGTMRLG~~~~~l-~~~S~~~~iYg~~~I~ERHRHRY-EvN~~y~~~le-~~Gl~~sg~~~d~~lvEiiEl~~ 506 (544) T Consensus 163 -----------lfGVf~h~~~~~~~pLlrGfdd-~f~~PhS-R~t~i~~---~~i~~~~~L~iLa~s~~~G-~~l~~~~d 225 (298) T pfam04204 163 -----------LFGVFRHRVLDPHSPLLRGFDD-EFYAPHS-RHTEVRR---EDIEAVPGLEILAESEEAG-VYLVASKD 225 (298) T ss_pred -----------EEEEECCCCCCCCCCCCCCCCC-CCCCCCC-CCCCCCH---HHHHCCCCCEEEECCCCCC-EEEEECCC T ss_conf -----------5885123457899801047876-5306742-3346998---8971378847986778776-17998289 Q ss_pred CCEEEEEECCCCCCCC Q ss_conf 9849997248773278 Q gi|254780195|r 507 HPWFIGVQYHPELKSR 522 (544) Q Consensus 507 HpffvgvQfHPEf~Sr 522 (544) T Consensus 226 ~r-~vf~~GH~EYd~~ 240 (298) T pfam04204 226 GR-QVFVTGHPEYDAD 240 (298) T ss_pred CC-EEEEECCCCCCHH T ss_conf 88-6888278666754 |
|
| >PRK11366 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=219.89 Aligned_cols=177 Identities=28% Similarity=0.350 Sum_probs=126.5 Q ss_pred CCHHHHHCCCCEEEECCC--------CCCCCCH---------HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 344566216983997377--------7865501---------68889988740476322355769999999987516889 Q gi|254780195|r 338 EDPVKHFYGVHGILVPGG--------FGKRGSE---------GKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIP 400 (544) Q Consensus 338 ~~~~~~L~~~dGIlVPGG--------FG~RGie---------GkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~ 400 (544) T Consensus 53 ~~~~~~l~~lDGllltGG~~Di~P~~Yge~~~~~~~dp~RD~~E~~L~~~A~~~~~PiLGICRG~Q~l------NVa--- 123 (254) T PRK11366 53 SLLEQLLPKLDGIYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMALINAALERRIPIFAICRGLQEL------VVA--- 123 (254) T ss_pred HHHHHHHHHCCEEEECCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHH------HHH--- T ss_conf 89999998789899689989889423688988888884212999999999998599979860355899------987--- Q ss_pred CCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHH-CCCEEEEECCCCCCCCHHHH Q ss_conf 99700035666641211501123465300156554674023165257855870668863-79847660252333278899 Q gi|254780195|r 401 NACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIY-GLDLIPERHRHRYEVNVRYR 479 (544) Q Consensus 401 dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iY-g~~~I~ERHRHRYEvN~~y~ 479 (544) T Consensus 124 ------~GGtL~qdl~~~~~~~~H~~~~-~~~~----~~~~~~~H~V~i~~~s~L~~i~~~~~~~~--------VNS~Hh 184 (254) T PRK11366 124 ------TGGSLHRKLCEQPELLEHREDP-ELPV----EQQYAPSHEVQVEEGGLLSALLPECSNFW--------VNSLHG 184 (254) T ss_pred ------HCCEEEEECCCCCCCCCCCCCC-CCCC----CCCCCCCCEEEECCCCCHHHHHCCCCCEE--------EECHHH T ss_conf ------3886442200376523445688-8985----43325641189868986999748987058--------742135 Q ss_pred HHHHH--CCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCC-HHHHHHHHHHHHHHHC Q ss_conf 89997--8959999869998689998389984999724877327876988-4158999999987644 Q gi|254780195|r 480 EKLEG--CGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPH-PLFVSFIQATVLYSQS 543 (544) Q Consensus 480 ~~le~--~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~ph-PLF~~fi~Aal~~~~~ 543 (544) T Consensus 185 Qav~~lg~gl~v~A~a~DG-~IEAie~~~~~f~lGVQWHPE~~~~~~~~~~~LF~aFv~a~r~~~~~ 250 (254) T PRK11366 185 QGAKVVSPRLRVEARSPDG-LVEAVSVINHPFALGVQWHPEWNSSEYALSRILFEGFITACQHHIAE 250 (254) T ss_pred HHHHCCCCCCEEEEEECCC-CEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 4331337773899990899-77999957998589997088778767867899999999999999997 |
|
| >COG2071 Predicted glutamine amidotransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-25 Score=202.61 Aligned_cols=170 Identities=27% Similarity=0.399 Sum_probs=130.1 Q ss_pred CCCHHHHHCCCCEEEECCC-------CCCCCCHHH-----------HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC Q ss_conf 2344566216983997377-------786550168-----------8899887404763223557699999999875168 Q gi|254780195|r 337 KEDPVKHFYGVHGILVPGG-------FGKRGSEGK-----------IAAIKFARENKIPFLGICFGMQMAVIEAARNLAG 398 (544) Q Consensus 337 ~~~~~~~L~~~dGIlVPGG-------FG~RGieGk-----------I~Ai~yARen~iP~LGIClGmQ~avIEfARnvlg 398 (544) T Consensus 51 ~~~~~~~l~~iDgliltGg~nV~P~~YGee~~~~~~~~~p~RD~~E~aLi~~ALe~~iPILgICRG~Qll------NVa- 123 (243) T COG2071 51 PEDARQYLDLIDGLILTGGSNVDPSLYGEEPSEKDGPYDPERDAFELALIRAALERGIPILGICRGLQLL------NVA- 123 (243) T ss_pred HHHHHHHHHHCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHH------HHH- T ss_conf 7789999865367895289868987839888855677884300778999999997699889984015788------787- Q ss_pred CCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCHHH Q ss_conf 89997000356666412115011234653001565546740231652578558706688637984766025233327889 Q gi|254780195|r 399 IPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRY 478 (544) Q Consensus 399 l~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I~ERHRHRYEvN~~y 478 (544) T Consensus 124 --------~GGtL~q~i~~~~~~~~H~~----------~~~~~~~~H~V~i~~~s~La~i~g~~~~~--------VNS~H 177 (243) T COG2071 124 --------LGGTLYQDISEQPGHIDHRQ----------PNPVHIESHEVHIEPGSKLAKILGESEFM--------VNSFH 177 (243) T ss_pred --------HCCEEEHHHHCCCCCCCCCC----------CCCCCCCEEEEEECCCCCHHHHCCCCCEE--------ECCHH T ss_conf --------56753021230545002569----------99865431579954784177753765226--------31517 Q ss_pred HHHHHH--CCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCC-HHHHHHHHHHHHH Q ss_conf 989997--8959999869998689998389984999724877327876988-4158999999987 Q gi|254780195|r 479 REKLEG--CGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPH-PLFVSFIQATVLY 540 (544) Q Consensus 479 ~~~le~--~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~ph-PLF~~fi~Aal~~ 540 (544) T Consensus 178 hQaIk~La~~L~V~A~a~DG-~VEAie~~~~~fvlGVQWHPE~~~~~~~~~~~LFe~F~~~~~~~ 241 (243) T COG2071 178 HQAIKKLAPGLVVEARAPDG-TVEAVEVKNDAFVLGVQWHPEYLVDTNPLSLALFEAFVNACKKH 241 (243) T ss_pred HHHHHHHCCCCEEEEECCCC-CEEEEEECCCCEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHH T ss_conf 78999767886799997999-58989853885079986175552267868899999999998751 |
|
| >cd01745 GATase1_2 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-20 Score=167.05 Aligned_cols=124 Identities=33% Similarity=0.508 Sum_probs=95.8 Q ss_pred CCHHHHHCCCCEEEECCCC-------CC------CCC-----HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 3445662169839973777-------86------550-----16888998874047632235576999999998751688 Q gi|254780195|r 338 EDPVKHFYGVHGILVPGGF-------GK------RGS-----EGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGI 399 (544) Q Consensus 338 ~~~~~~L~~~dGIlVPGGF-------G~------RGi-----eGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl 399 (544) T Consensus 45 ~~~~~~l~~lDGliLtGG~Di~p~~yg~~~~~~~~~~~~~RD~~E~~l~~~a~~~~~PilGICRG~Q~i------nv~-- 116 (189) T cd01745 45 EDLEQYLELLDGLLLTGGGDVDPPLYGEEPHPELGPIDPERDAFELALLRAALERGKPILGICRGMQLL------NVA-- 116 (189) T ss_pred HHHHHHHHHCCEEEECCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHH------HHH-- T ss_conf 999999987799997288778810038877765678886689999999999998098760350549999------999-- Q ss_pred CCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCHHHH Q ss_conf 99970003566664121150112346530015655467402316525785587066886379847660252333278899 Q gi|254780195|r 400 PNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYR 479 (544) Q Consensus 400 ~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I~ERHRHRYEvN~~y~ 479 (544) T Consensus 117 ------------------------------------~GGtL~q---~-------------------------i~VNS~H~ 132 (189) T cd01745 117 ------------------------------------LGGTLYQ---D-------------------------IRVNSLHH 132 (189) T ss_pred ------------------------------------HCCEEEE---C-------------------------CCCCCCCH T ss_conf ------------------------------------5985750---3-------------------------40576410 Q ss_pred HHHHH--CCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCC-HHHHHHH Q ss_conf 89997--8959999869998689998389984999724877327876988-4158999 Q gi|254780195|r 480 EKLEG--CGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPH-PLFVSFI 534 (544) Q Consensus 480 ~~le~--~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~ph-PLF~~fi 534 (544) T Consensus 133 ~~i~~l~~~l~~~a~~~dg-~iEa~~~~~~~~~~gvqwHPE~~~~~~~~~~~lF~~fv 189 (189) T cd01745 133 QAIKRLADGLRVEARAPDG-VIEAIESPDRPFVLGVQWHPEWLADTDPDSLKLFEAFV 189 (189) T ss_pred HHHHCCCCCCEEEEECCCC-CEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHC T ss_conf 0676078886899996999-87999968999089997488678989857889999869 |
This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine |
| >TIGR00888 guaA_Nterm GMP synthase, N-terminal domain; InterPro: IPR004739 The N-terminal region of GMP synthase 6 | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-13 Score=118.94 Aligned_cols=156 Identities=24% Similarity=0.384 Sum_probs=107.5 Q ss_pred ECCCCCCCCCHHHHHCCCC--EEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC Q ss_conf 2256567234456621698--39973777865501688899887404763223557699999999875168899970003 Q gi|254780195|r 330 IDAETLEKEDPVKHFYGVH--GILVPGGFGKRGSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEF 407 (544) Q Consensus 330 Idse~le~~~~~~~L~~~d--GIlVPGGFG~RGieGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf 407 (544) T Consensus 23 VysE~~p~t~~~eeI~~~~P~GiILSGGP~sv~~~n~~~~~~~if~LgVPvLGICYG~Ql~A~~lGG~V~---~~~~~EY 99 (195) T TIGR00888 23 VYSEIVPNTTPLEEIKEKNPKGIILSGGPASVYAENAPEADEKIFELGVPVLGICYGMQLMAKQLGGEVG---RAEKREY 99 (195) T ss_pred CEEEEEECCCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCEEE---ECCCCCC T ss_conf 1357840778779986129867997278876467885022488862799688762457899998298776---5688873 Q ss_pred CCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHC------CCEEEEECCCCCCCCHHHHHH Q ss_conf 56666412115011234653001565546740231652578558706688637------984766025233327889989 Q gi|254780195|r 408 SEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYG------LDLIPERHRHRYEVNVRYREK 481 (544) Q Consensus 408 ~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg------~~~I~ERHRHRYEvN~~y~~~ 481 (544) T Consensus 100 G~a~l~i~~----------------------------------~~~LF~glp~~LTA~P~~~----------VWMSH~D~ 135 (195) T TIGR00888 100 GKAELEILD----------------------------------EDDLFEGLPKALTAKPEST----------VWMSHGDK 135 (195) T ss_pred CEEEEEEEC----------------------------------CCHHHHCCCHHHCCCCCCC----------CCCCCCCE T ss_conf 138999842----------------------------------8812307803534688887----------11234624 Q ss_pred HHH--CCCEEEEECCC-CCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH Q ss_conf 997--89599998699-9868999838998499972487732787698841589999 Q gi|254780195|r 482 LEG--CGLKFSGFSVD-HALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544) Q Consensus 482 le~--~Gl~~sg~~~d-~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544) T Consensus 136 V~~lP~gF~vlA~s~~hc-P~aAm~~~~K~~Y-GVQFHPEV~Ht-~~G~~~L~NF~~ 189 (195) T TIGR00888 136 VKELPEGFKVLATSDNHC-PVAAMEHEDKPIY-GVQFHPEVTHT-EYGKELLKNFVK 189 (195) T ss_pred EEECCCCCEEEEECCCCC-CCCEEECCCCCEE-EEEECCCEEEC-HHHHHHHHHHHH T ss_conf 200869976887528988-1000004899666-66517831215-345789998887 |
3.5.2 from EC is recognised by this signature. GMP synthase catalyzes the synthesis of GMP from XMP , . |
| >cd01741 GATase1_1 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.7e-10 Score=96.27 Aligned_cols=147 Identities=22% Similarity=0.293 Sum_probs=88.8 Q ss_pred CCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCC---C---CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC Q ss_conf 7241677225656723445662169839973777865---5---016888998874047632235576999999998751 Q gi|254780195|r 323 TKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKR---G---SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNL 396 (544) Q Consensus 323 ~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~R---G---ieGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnv 396 (544) T Consensus 26 ~~~~~~~~~~~~~~~---~~~~~~~dgvii~Gg~~~~~~~~~pwi~~~~~~i~~~~~~~~PilGIC~G~Qlla~-----a 97 (188) T cd01741 26 ETIEIDVVDVYAGEL---LPDLDDYDGLVILGGPMSVDEDDYPWLKKLKELIRQALAAGKPVLGICLGHQLLAR-----A 97 (188) T ss_pred CCEEEEEEECCCCCC---CCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHH-----H T ss_conf 846899996666989---97844408899969987778678866999999999999879999998468999999-----8 Q ss_pred CCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCC--CEEEEECCCCCCC Q ss_conf 68899970003566664121150112346530015655467402316525785587066886379--8476602523332 Q gi|254780195|r 397 AGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGL--DLIPERHRHRYEV 474 (544) Q Consensus 397 lgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~--~~I~ERHRHRYEv 474 (544) T Consensus 98 lGg~------V--------~~~~----------------~~--~e~G~~~i~lt~~~~~~~~~~~~~~~~~~~~~H~d~v 145 (188) T cd01741 98 LGGK------V--------GRNP----------------KG--WEIGWFPVTLTEAGKADPLFAGLPDEFPVFHWHGDTV 145 (188) T ss_pred CCCE------E--------EECC----------------CC--CCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHEEE T ss_conf 3999------9--------8789----------------87--5215799999547665422147997654340210272 Q ss_pred CHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCC Q ss_conf 78899899978959999869998689998389984999724877 Q gi|254780195|r 475 NVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPE 518 (544) Q Consensus 475 N~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPE 518 (544) T Consensus 146 ~~------lP~~~~~la~s~~~~-~qa~~~~~~--~~g~QfHPE 180 (188) T cd01741 146 VE------LPPGAVLLASSEACP-NQAFRYGDR--ALGLQFHPE 180 (188) T ss_pred EE------CCCCCEEEEECCCCC-EEEEEECCE--EEEEECCCC T ss_conf 43------899989999889997-889997995--899957612 |
This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine |
| >PRK00074 guaA GMP synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.2e-10 Score=97.49 Aligned_cols=142 Identities=22% Similarity=0.317 Sum_probs=86.9 Q ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCC Q ss_conf 69839973777865501688899887404763223557699999999875168899970003566664121150112346 Q gi|254780195|r 346 GVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGD 425 (544) Q Consensus 346 ~~dGIlVPGGFG~RGieGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~ 425 (544) T Consensus 47 ~pkgIILSGGP~SV~~~~aP~~d~~if~l~IPILGICYG~Qlia~~~GG~V~---~s~~rEyG~a~-------------- 109 (513) T PRK00074 47 NPKGIILSGGPASVYEEGAPRADPEIFELGVPVLGICYGMQLMAHQLGGKVE---RAGKREYGRAE-------------- 109 (513) T ss_pred CCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEECHHHHHHHHHHCCEEE---ECCCCEECCEE-------------- T ss_conf 9978998899963689999889989982699869975889999998599998---56960112148-------------- Q ss_pred CCCCCCCCCCCCCEEEECCEEEEECCCCHHH-HHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEE Q ss_conf 5300156554674023165257855870668-863798476602523332788998999789599998699986899983 Q gi|254780195|r 426 QQEKRLPSDDLGATMRLGAYDVSLKEETLIS-RIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEY 504 (544) Q Consensus 426 ~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~-~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl 504 (544) T Consensus 110 ---------------------l~i~~~s~Lf~gl~~~~~VWMSHg-------D~V~~-lP~gF~viA~s~n~-~iAai~~ 159 (513) T PRK00074 110 ---------------------LEVDGDSALFKGIPEEQDVWMSHG-------DKVTE-LPEGFKVIASTENC-PIAAIAN 159 (513) T ss_pred ---------------------EEEECCCCCCCCCCCCCEEEEECC-------CCEEE-CCCCCEEEEECCCC-CEEEEEE T ss_conf ---------------------999158733368998636887524-------30143-79984799954997-3678980 Q ss_pred CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH Q ss_conf 89984999724877327876988415899999 Q gi|254780195|r 505 INHPWFIGVQYHPELKSRPLDPHPLFVSFIQA 536 (544) Q Consensus 505 ~~HpffvgvQfHPEf~Srp~~phPLF~~fi~A 536 (544) T Consensus 160 ~~~~iy-GvQFHPEV~HT~-~G~~iL~NFl~~ 189 (513) T PRK00074 160 EERKFY-GVQFHPEVTHTE-QGKKLLENFVFD 189 (513) T ss_pred CCCCEE-EEECCCEEEECC-CCHHHHHHHHHH T ss_conf 678678-870286345317-757999999999 |
|
| >PRK07567 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=8.8e-09 Score=83.94 Aligned_cols=146 Identities=20% Similarity=0.269 Sum_probs=85.0 Q ss_pred CCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC-CCCC-----------CCHHHH-HHHHHHHCCCCCHHHHHHHHHHHH Q ss_conf 724167722565672344566216983997377-7865-----------501688-899887404763223557699999 Q gi|254780195|r 323 TKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG-FGKR-----------GSEGKI-AAIKFARENKIPFLGICFGMQMAV 389 (544) Q Consensus 323 ~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG-FG~R-----------GieGkI-~Ai~yARen~iP~LGIClGmQ~av 389 (544) T Consensus 32 ~q~~~~rld~~~~p~----~dL~~ydgvivgGsp~~vsd~~~~~~~~q~~~e~~l~~Ll~~~~~~~~P~LGiC~G~Qlla 107 (242) T PRK07567 32 AELRRIRLDHEELPD----LDLDDFSGVIVGGSPFNVSDPAYSKSPTQRRVEAELSGLLDEVVARDFPFLGCCYGVGTLG 107 (242) T ss_pred HHEEEEEECCCCCCC----CCHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHH T ss_conf 997999814889998----7830007899948897567854456468889999999999999846998899856389999 Q ss_pred HHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCC----CEEE Q ss_conf 999875168899970003566664121150112346530015655467402316525785587066886379----8476 Q gi|254780195|r 390 IEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGL----DLIP 465 (544) Q Consensus 390 IEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~----~~I~ 465 (544) T Consensus 108 ~-----alGG~------V~~~-------------------------~~~--e~G~~~i~lt~~g~~Dpl~~~lp~~f~a~ 149 (242) T PRK07567 108 H-----HLGGV------VDRT-------------------------HGE--PVGATTVTLTDAGRRDPLTADLPDTFTAF 149 (242) T ss_pred H-----HCCCE------EECC-------------------------CCC--EEEEEEEEECCCCCCCCCCCCCCCCEEEE T ss_conf 9-----72988------8279-------------------------987--07799999814567791101798441799 Q ss_pred EECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCC Q ss_conf 60252333278899899978959999869998689998389984999724877327 Q gi|254780195|r 466 ERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKS 521 (544) Q Consensus 466 ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~S 521 (544) T Consensus 150 ~--~H~d~V~-----~L-P~ga~lLA~s~~c-pvqafr~g~~--~y~~QFHPE~d~ 194 (242) T PRK07567 150 T--GHKEAVV-----AL-PPGAVLLATGPTC-PVQMFRAGEN--VYATQFHPELDA 194 (242) T ss_pred E--ECCCEEE-----EC-CCCCEEEECCCCC-CHHEEEECCC--EEEEECCCCCCH T ss_conf 8--6164137-----68-9984899849998-2361893797--899924840799 |
|
| >PRK09065 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.7e-09 Score=85.32 Aligned_cols=134 Identities=22% Similarity=0.319 Sum_probs=76.6 Q ss_pred HHHCCCCEEEECCCC-CCC-C---CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEE Q ss_conf 662169839973777-865-5---01688899887404763223557699999999875168899970003566664121 Q gi|254780195|r 342 KHFYGVHGILVPGGF-GKR-G---SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIA 416 (544) Q Consensus 342 ~~L~~~dGIlVPGGF-G~R-G---ieGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~ 416 (544) T Consensus 52 p~~~~~dg~iitGS~~~v~d~~pWi~~l~~~ir~~~~~~~PilGICfGhQllA~AlGG~V~-----------~------- 113 (238) T PRK09065 52 PAPEDFAGVLITGSHAMVTDRAPWSERTADWLRQAAAAGMPLLGICYGHQLLAHALGGEVG-----------Y------- 113 (238) T ss_pred CCHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCEEE-----------E------- T ss_conf 8957848899979852057998889999999999987799999981778999998498797-----------6------- Q ss_pred CCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCC-C-EEEEECCCCCCCCHHHHHHHHHCCCEEEEECC Q ss_conf 150112346530015655467402316525785587066886379-8-47660252333278899899978959999869 Q gi|254780195|r 417 LMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGL-D-LIPERHRHRYEVNVRYREKLEGCGLKFSGFSV 494 (544) Q Consensus 417 ~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~-~-~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~ 494 (544) T Consensus 114 -----------------~p~G~--eiG~~~v~lt~~g~~dplf~~~p~~~~~~~~H~D~V~-----~l-P~ga~~LAss~ 168 (238) T PRK09065 114 -----------------NPAGR--ESGTVALELHPAAAQDPLFAGLPATFPAHATHLQTVL-----RL-PPGAVVLARSA 168 (238) T ss_pred -----------------CCCCC--CCCEEEEEECHHCCCCCHHCCCCCCCEEEEEEECEEE-----EC-CCCEEEEEECC T ss_conf -----------------79976--3651256875100457111189876179999514289-----64-99838998099 Q ss_pred CCCEEEEEEECCCCEEEEEECCCCCCC Q ss_conf 998689998389984999724877327 Q gi|254780195|r 495 DHALPEVVEYINHPWFIGVQYHPELKS 521 (544) Q Consensus 495 d~~lvEiiEl~~HpffvgvQfHPEf~S 521 (544) T Consensus 169 ~c-~~qa~~~g~~--~~gvQfHPEft~ 192 (238) T PRK09065 169 HD-PHQAFRYGPS--AWGVQFHPEFTA 192 (238) T ss_pred CC-HHHHEEECCC--EEEEECCCCCCH T ss_conf 99-0571785894--899956862899 |
|
| >PRK06490 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.4e-08 Score=80.73 Aligned_cols=130 Identities=23% Similarity=0.381 Sum_probs=75.4 Q ss_pred HHHCCCCEEEECCC-CCCC----CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CCCHHHCCCCCCCCE Q ss_conf 66216983997377-7865----50168889988740476322355769999999987516889-997000356666412 Q gi|254780195|r 342 KHFYGVHGILVPGG-FGKR----GSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIP-NACSTEFSEAGVPVI 415 (544) Q Consensus 342 ~~L~~~dGIlVPGG-FG~R----GieGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~-dAnStEf~~~~~pvI 415 (544) T Consensus 52 ~~l~~~dglvVlGGpmsa~D~~p~l~~e~~~I~~~l~~~~P~LGICLGaQLl----A~a-lGg~V~~~~----------- 115 (243) T PRK06490 52 ETLEDHAGAVIFGGPMSANDPDDFIRREIDWISVPLKENKPFLGICLGAQML----ARH-LGARVAPHP----------- 115 (243) T ss_pred CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHH----HHH-HCCEEECCC----------- T ss_conf 9754605899928999989987179999999999998699889988849999----998-398884488----------- Q ss_pred ECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCC Q ss_conf 11501123465300156554674023165257855870668863798476602523332788998999789599998699 Q gi|254780195|r 416 ALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVD 495 (544) Q Consensus 416 ~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d 495 (544) T Consensus 116 ---------------------~g~~EiG~~~i~~t~~g~~~~~-~p~~v~~wH~e~f~L---------P~gA~lLA~s~~ 164 (243) T PRK06490 116 ---------------------DGRVEIGYYPLRPTEAGRALMP-WPEMVYHWHREGFDL---------PKGAELLATGDD 164 (243) T ss_pred ---------------------CCCCCCCCEEEEECCCCCCCCC-CCCEEEEEECCCCCC---------CCCCEEEECCCC T ss_conf ---------------------8877578523567745323458-978367862432006---------999589878999 Q ss_pred CCEEEEEEECCCCEEEEEECCCCCCC Q ss_conf 98689998389984999724877327 Q gi|254780195|r 496 HALPEVVEYINHPWFIGVQYHPELKS 521 (544) Q Consensus 496 ~~lvEiiEl~~HpffvgvQfHPEf~S 521 (544) T Consensus 165 c-~~QAFr~G~~--a~g~QFHpEvt~ 187 (243) T PRK06490 165 F-PNQAFRYGDN--AWGLQFHPEVTR 187 (243) T ss_pred C-CHHHEEECCC--EEEEECCEECCH T ss_conf 8-3682897694--899954847878 |
|
| >COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.2e-09 Score=85.04 Aligned_cols=135 Identities=24% Similarity=0.255 Sum_probs=74.9 Q ss_pred CCCEEEECCCCC---CCC--CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCH--HHCCCCCCCCEECC Q ss_conf 698399737778---655--01688899887404763223557699999999875168899970--00356666412115 Q gi|254780195|r 346 GVHGILVPGGFG---KRG--SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACS--TEFSEAGVPVIALM 418 (544) Q Consensus 346 ~~dGIlVPGGFG---~RG--ieGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnS--tEf~~~~~pvI~~l 418 (544) T Consensus 45 ~~~giIlsGgp~sv~~~~~w~~~~~~~i~~~~~p~~pvLGIC~G~Ql~A~-----~lGg~V~~~~~~E~G---------- 109 (198) T COG0518 45 SPDGIIISGGPMSVYDEDPWLPREKDLIKDAGVPGKPVLGICLGHQLLAK-----ALGGKVERGPKREIG---------- 109 (198) T ss_pred CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHH-----HHCCEEECCCCCCCC---------- T ss_conf 88889985898877644333055789999718888878998761899999-----849889646887651---------- Q ss_pred CHHCCCCCCCCCCCCCCCCCEEEECCEEEEECC-CC-HHHHHHCCCEEEEECCCCCCCCHHHHHHHH--HCCCEEEEECC Q ss_conf 011234653001565546740231652578558-70-668863798476602523332788998999--78959999869 Q gi|254780195|r 419 SEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKE-ET-LISRIYGLDLIPERHRHRYEVNVRYREKLE--GCGLKFSGFSV 494 (544) Q Consensus 419 ~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~-~S-~~~~iYg~~~I~ERHRHRYEvN~~y~~~le--~~Gl~~sg~~~ 494 (544) T Consensus 110 -------------------------~~~v~~~~~~~~l~~gl~~~~~---------~v~~sH~D~v~~lP~g~~vlA~s~ 155 (198) T COG0518 110 -------------------------WTPVELTEGDDPLFAGLPDLFT---------TVFMSHGDTVVELPEGAVVLASSE 155 (198) T ss_pred -------------------------EEEEEEECCCCCCCCCCCCCCC---------CCCCCHHCCCCCCCCCCEEEECCC T ss_conf -------------------------5999972586500048854337---------106613074434899989986589 Q ss_pred CCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHH Q ss_conf 9986899983899849997248773278769884158999 Q gi|254780195|r 495 DHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFI 534 (544) Q Consensus 495 d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi 534 (544) T Consensus 156 ~c-p~qa~~~~--~~~~gvQFHpEv~~--~~~~~~l~nf~ 190 (198) T COG0518 156 TC-PNQAFRYG--KRAYGVQFHPEVTH--EYGEALLENFA 190 (198) T ss_pred CC-HHHHEECC--CCEEEEEEEEEEEH--HHHHHHHHHHH T ss_conf 98-04205667--85799942018738--99999999865 |
|
| >PRK07053 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.9e-08 Score=79.29 Aligned_cols=156 Identities=19% Similarity=0.312 Sum_probs=86.5 Q ss_pred CCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC-CCC---C---CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 724167722565672344566216983997377-786---5---501688899887404763223557699999999875 Q gi|254780195|r 323 TKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG-FGK---R---GSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARN 395 (544) Q Consensus 323 ~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG-FG~---R---GieGkI~Ai~yARen~iP~LGIClGmQ~avIEfARn 395 (544) T Consensus 26 ~g~~~~~~~~~~~~--~~p~~~~~~d~livlGGpms~~d~~~~Pwl~~e~~lIr~a~~~~~PvLGIClG~QLlA~AlGG~ 103 (235) T PRK07053 26 RGYRVRYVDVGVDD--LEVLDALEPDLLVVLGGPIGVYDDALYPFLAPEIALLRQRLAAGLPTLGICLGAQLIARALGAR 103 (235) T ss_pred CCCEEEEEECCCCC--CCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCE T ss_conf 89959999678898--8999966679999938998988776685589999999999986998899847389999970977 Q ss_pred CCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCH---HHHHHC-CCEEEEECCCC Q ss_conf 16889997000356666412115011234653001565546740231652578558706---688637-98476602523 Q gi|254780195|r 396 LAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETL---ISRIYG-LDLIPERHRHR 471 (544) Q Consensus 396 vlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~---~~~iYg-~~~I~ERHRHR 471 (544) T Consensus 104 V~--~-~~~~E-----------------------------------iG~~~v~~t~~~~~dpl~~~~~~~~~v~~--wH~ 143 (235) T PRK07053 104 VY--P-GAQKE-----------------------------------IGWAPLTLTDAGRASPLRHLDGADTPVLH--WHG 143 (235) T ss_pred EE--C-CCCCC-----------------------------------EEEEEEEECCCCCCCCHHCCCCCCCEEEE--EEC T ss_conf 86--0-89960-----------------------------------05887785512357700014876772799--954 Q ss_pred CCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH Q ss_conf 33278899899978959999869998689998389984999724877327876988415899999 Q gi|254780195|r 472 YEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQA 536 (544) Q Consensus 472 YEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~A 536 (544) T Consensus 144 D~~-----~-L-P~ga~~LAss~~c~-~Qaf~~g~~--~~g~QFHpE~t~------~~v~~W~~~ 192 (235) T PRK07053 144 DTF-----D-L-PEGAILLASTPACR-NQAFAWGNH--VLALQFHPEIRA------DRFEPWLIG 192 (235) T ss_pred EEE-----E-C-CCCCEEEECCCCCH-HHHEEECCC--EEEEECCEECCH------HHHHHHHHH T ss_conf 085-----3-4-99838998289985-896784796--899965846888------999999984 |
|
| >PRK08250 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=7.1e-08 Score=77.39 Aligned_cols=159 Identities=19% Similarity=0.262 Sum_probs=90.8 Q ss_pred CCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC-CCCCCC---------HHHHHHHHHHHCCCCCHHHHHHHHHHHHHH Q ss_conf 6724167722565672344566216983997377-786550---------168889988740476322355769999999 Q gi|254780195|r 322 YTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG-FGKRGS---------EGKIAAIKFARENKIPFLGICFGMQMAVIE 391 (544) Q Consensus 322 ~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG-FG~RGi---------eGkI~Ai~yARen~iP~LGIClGmQ~avIE 391 (544) T Consensus 23 ~~G~~~~~~~~~~g~~--lP~~~~~~d~liVlGGpms~~~~~e~~p~l~l~~E~~lir~a~~~~~PvlGIClG~QliA~- 99 (235) T PRK08250 23 DRGYTISWSRVYAGEA--LPENADGFDMLIVLGGPQSPRTTREECPYFDSKAEQHLINQAITARKAVVGVCLGSQLIGE- 99 (235) T ss_pred HCCCEEEEEECCCCCC--CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHH- T ss_conf 7899699996689998--9998102588999789987777321278747099999999999869988998167799999- Q ss_pred HHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHC----CCEEEEE Q ss_conf 987516889997000356666412115011234653001565546740231652578558706688637----9847660 Q gi|254780195|r 392 AARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYG----LDLIPER 467 (544) Q Consensus 392 fARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg----~~~I~ER 467 (544) T Consensus 100 ----AlGg~------V~~~~~~---------------------------EiG~~~i~~t~~~~~d~~~~~~~~~~~v~-- 140 (235) T PRK08250 100 ----ALGAK------YCQSPEK---------------------------EIGHFPITLTEAGLRDPLLKHFGSTLTVG-- 140 (235) T ss_pred ----HCCCE------EECCCCC---------------------------EEEEEEEEEECCCCCCHHHHCCCCCCEEE-- T ss_conf ----80987------7548998---------------------------24489716301444584665289876578-- Q ss_pred CCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 25233327889989997895999986999868999838998499972487732787698841589999999 Q gi|254780195|r 468 HRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATV 538 (544) Q Consensus 468 HRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aal 538 (544) T Consensus 141 ~wH~-d~-----~~L-P~gA~lLAss~~c-~~Qaf~~g~~--~~g~QfHpE~t~------~~v~~wi~~~~ 195 (235) T PRK08250 141 HWHN-DM-----PGL-TDQATVLATSEGC-PRQIVQYGNL--VYGFQCHMEFTV------EAVEGLIAHSQ 195 (235) T ss_pred EEEE-EE-----EEC-CCCCEEEECCCCC-HHHHEEECCC--EEEEECCEECCH------HHHHHHHHHHH T ss_conf 9852-36-----206-9996799739998-4895882695--899971037899------99999999749 |
|
| >TIGR01815 TrpE-clade3 anthranilate synthase; InterPro: IPR010112 This entry represents a small clade of anthranilate synthases from alpha proteobacteria and Nostoc (a cyanobacterium) | Back alignment and domain information |
|---|
Probab=98.77 E-value=9.9e-09 Score=83.58 Aligned_cols=129 Identities=23% Similarity=0.327 Sum_probs=79.5 Q ss_pred CCEEEECCCCCC-CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCC Q ss_conf 983997377786-5501688899887404763223557699999999875168899970003566664121150112346 Q gi|254780195|r 347 VHGILVPGGFGK-RGSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGD 425 (544) Q Consensus 347 ~dGIlVPGGFG~-RGieGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~ 425 (544) T Consensus 568 PDLVVLSPGPGrP~dFd-v~~Ti~aa~ar~lP~FGVCLGLQg~vEafGG~-----------L~vL~~P~--------HGK 627 (726) T TIGR01815 568 PDLVVLSPGPGRPKDFD-VKETIKAALARDLPVFGVCLGLQGLVEAFGGE-----------LDVLAIPV--------HGK 627 (726) T ss_pred CCEEEECCCCCCCCCCC-HHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCC-----------CCCCCCCC--------CCC T ss_conf 98898687312387544-78899999972898577413468999874672-----------13578887--------886 Q ss_pred CCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEEC Q ss_conf 53001565546740231652578558706688637984766025233327889989997895999986999868999838 Q gi|254780195|r 426 QQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYI 505 (544) Q Consensus 426 ~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~ 505 (544) T Consensus 628 ~-----------------srirVl~p~s~~F~gLpe~~TVGRY-HSlf---A~~~rLP-~el~vTA~s~Dg-~iMaiEH~ 684 (726) T TIGR01815 628 A-----------------SRIRVLEPDSVLFAGLPEELTVGRY-HSLF---ARSDRLP-KELKVTAESEDG-VIMAIEHR 684 (726) T ss_pred C-----------------CEEEEECCCEEEECCCCCCEEEEEE-EEEE---ECCCCCC-CCCEEEEEECCC-EEEEEECC T ss_conf 3-----------------3688836875787278970343003-7675---5645687-423787850687-17320247 Q ss_pred CCCEEEEEECCCCC Q ss_conf 99849997248773 Q gi|254780195|r 506 NHPWFIGVQYHPEL 519 (544) Q Consensus 506 ~HpffvgvQfHPEf 519 (544) T Consensus 685 ~lP-~AAVQFHPES 697 (726) T TIGR01815 685 KLP-VAAVQFHPES 697 (726) T ss_pred CCC-CCEEECCCCH T ss_conf 687-1125117611 |
This enzyme is the first step in the pathway for the biosynthesis of tryprophan from chorismate.; GO: 0004049 anthranilate synthase activity, 0000162 tryptophan biosynthetic process. |
| >COG0047 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.50 E-value=9.5e-06 Score=62.05 Aligned_cols=171 Identities=27% Similarity=0.376 Sum_probs=101.7 Q ss_pred HHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCC--HHHHHHHHHHH-------CCCCCHHHHHHHHHHHHH Q ss_conf 736724167722565672344566216983997377786550--16888998874-------047632235576999999 Q gi|254780195|r 320 SNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGS--EGKIAAIKFAR-------ENKIPFLGICFGMQMAVI 390 (544) Q Consensus 320 ~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGi--eGkI~Ai~yAR-------en~iP~LGIClGmQ~avI 390 (544) T Consensus 25 ~aG~~~~~V~~~d~~~~~--------~~d~vv~pGGFSyGDyLr~Gaiaa~~~v~~~v~~~a~~g~~vLGICNGfQiL~- 95 (231) T COG0047 25 RAGFEAEDVWHSDLLLGR--------DFDGVVLPGGFSYGDYLRAGAIAAIAPVMDEVREFAEKGKPVLGICNGFQILS- 95 (231) T ss_pred HCCCCCEEEEEEECCCCC--------CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHH- T ss_conf 849982499855035677--------74689974887764335732677557899999999868971999853508989- Q ss_pred HHHHHCCC-CCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEE---ECCCCHHHHHHCC-CEEE Q ss_conf 99875168-89997000356666412115011234653001565546740231652578---5587066886379-8476 Q gi|254780195|r 391 EAARNLAG-IPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVS---LKEETLISRIYGL-DLIP 465 (544) Q Consensus 391 EfARnvlg-l~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~---l~~~S~~~~iYg~-~~I~ 465 (544) T Consensus 96 e-----~gLlPGa----l---------------~~N~s~------------~F~cr~v~l~V~~~~t~ft~~~~~g~~i~ 139 (231) T COG0047 96 E-----AGLLPGA----L---------------TRNESL------------RFECRWVYLRVENNNTPFTSGYEGGEVIP 139 (231) T ss_pred H-----CCCCCCC----E---------------ECCCCC------------CEEEEEEEEEEECCCCHHHHHCCCCCEEE T ss_conf 7-----2757761----0---------------247898------------45889899999358987787357885598 Q ss_pred --EECC-CCCCCCHHHHHHHHHCCCEEEEE-----------CCCCCEEEEEEECC-CCEEEEEECCCCCCCCCCCCCH-- Q ss_conf --6025-23332788998999789599998-----------69998689998389-9849997248773278769884-- Q gi|254780195|r 466 --ERHR-HRYEVNVRYREKLEGCGLKFSGF-----------SVDHALPEVVEYIN-HPWFIGVQYHPELKSRPLDPHP-- 528 (544) Q Consensus 466 --ERHR-HRYEvN~~y~~~le~~Gl~~sg~-----------~~d~~lvEiiEl~~-HpffvgvQfHPEf~Srp~~phP-- 528 (544) T Consensus 140 ipVAHgEGr~~~~~~~l~~l~~ngqvvfrY~d~~G~~~~~~NPNGS~~~IaGI~n~~G~V~gmMPHPERa~~~~~g~~Dg 219 (231) T COG0047 140 IPVAHGEGRYYADDETLAELEENGQVVFRYVDNNGETEEYANPNGSVNGIAGITNEDGNVLGMMPHPERASESLLGGEDG 219 (231) T ss_pred EEEEECCEEEECCHHHHHHHHHCCEEEEEEECCCCCEEEEECCCCCHHHCEEEECCCCCEEEECCCCHHHHHCCCCCCHH T ss_conf 77770562477167889987548979999936998540334798996662057769997898648944433202687138 Q ss_pred --HHHHHHH Q ss_conf --1589999 Q gi|254780195|r 529 --LFVSFIQ 535 (544) Q Consensus 529 --LF~~fi~ 535 (544) T Consensus 220 ~~lF~s~~~ 228 (231) T COG0047 220 LRLFRSARK 228 (231) T ss_pred HHHHHHHHH T ss_conf 999999998 |
|
| >KOG1622 consensus | Back alignment and domain information |
|---|
Probab=98.20 E-value=3.4e-06 Score=65.30 Aligned_cols=156 Identities=24% Similarity=0.339 Sum_probs=76.6 Q ss_pred CCEEEECCCCCCCCCHHHHH--CCCCEEEECCCCCCC------CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC Q ss_conf 41677225656723445662--169839973777865------5016888998874047632235576999999998751 Q gi|254780195|r 325 VQLSWIDAETLEKEDPVKHF--YGVHGILVPGGFGKR------GSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNL 396 (544) Q Consensus 325 v~i~wIdse~le~~~~~~~L--~~~dGIlVPGGFG~R------GieGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnv 396 (544) T Consensus 36 vRel~v~se~~p~~t~~~~i~~~~~rgiIiSGGP~SVya~dAP~~dp---~if---~~~vpvLGICYGmQ~i~~~~Gg~V 109 (552) T KOG1622 36 VRELNVQSEILPLTTPAKTITEYGPRGIIISGGPNSVYAEDAPSFDP---AIF---ELGVPVLGICYGMQLINKLNGGTV 109 (552) T ss_pred HHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCH---HHH---CCCCCCEEEHHHHHHHHHHHCCCC T ss_conf 98875433101377715666447942999818987322676888983---671---327743020167999999838750 Q ss_pred CCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCH Q ss_conf 68899970003566664121150112346530015655467402316525785587066886379847660252333278 Q gi|254780195|r 397 AGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNV 476 (544) Q Consensus 397 lgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I~ERHRHRYEvN~ 476 (544) T Consensus 110 ~~-~~--~RE~G~-----------------------------------~eI~v~~~~~lF~~~~~~~~~-------~Vll 144 (552) T KOG1622 110 VK-GM--VREDGE-----------------------------------DEIEVDDSVDLFSGLHKTEFM-------TVLL 144 (552) T ss_pred CC-CC--CCCCCC-----------------------------------CEEECCCHHHHHHHHCCCCEE-------EEEE T ss_conf 24-62--357787-----------------------------------347758615665432324103-------6610 Q ss_pred HHHHHHH--HCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHH Q ss_conf 8998999--789599998699986899983899849997248773278769884158999 Q gi|254780195|r 477 RYREKLE--GCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFI 534 (544) Q Consensus 477 ~y~~~le--~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi 534 (544) T Consensus 145 tHgdsl~~v~~g~kv~a~s~n~-~va~i~~e~kk-iyglqfhpEV~~t~~g-~~ll~nFl 201 (552) T KOG1622 145 THGDSLSKVPEGFKVVAFSGNK-PVAGILNELKK-IYGLQFHPEVTLTPNG-KELLKNFL 201 (552) T ss_pred CCCCCHHHCCCCCEEEEEECCC-CEEEEHHHHHH-HHCCCCCCCCCCCCCH-HHHHHHHH T ss_conf 0562064444542467761686-12211011003-2067888831036756-68999899 |
|
| >TIGR01737 FGAM_synth_I phosphoribosylformylglycinamidine synthase I; InterPro: IPR010075 In some species, phosphoribosylformylglycinamidine synthase is composed of a single polypeptide chain | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.1e-05 Score=59.61 Aligned_cols=184 Identities=26% Similarity=0.428 Sum_probs=113.9 Q ss_pred HHCCCCCEE----EECCCC-CCCCCHHHHHCCCCEEEECCCCCC--CCCHHHHHHH---HHH-------HCCCCCHHHHH Q ss_conf 736724167----722565-672344566216983997377786--5501688899---887-------40476322355 Q gi|254780195|r 320 SNYTKVQLS----WIDAET-LEKEDPVKHFYGVHGILVPGGFGK--RGSEGKIAAI---KFA-------RENKIPFLGIC 382 (544) Q Consensus 320 ~~~~kv~i~----wIdse~-le~~~~~~~L~~~dGIlVPGGFG~--RGieGkI~Ai---~yA-------Ren~iP~LGIC 382 (544) T Consensus 24 ~~Gv~~~~Vhikqw~~D~~r~~~~r---svfD~D~VvlPGGFSyGDYLRaGAIAa~rvk~p~~~~V~~~A~~G~pVLGiC 100 (264) T TIGR01737 24 LLGVDAEIVHIKQWYEDKSRLSDQR---SVFDYDAVVLPGGFSYGDYLRAGAIAALRVKSPIMQEVREFAEKGKPVLGIC 100 (264) T ss_pred HCCCCEEEEEEEECHHHHCCCCCCC---EEEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEE T ss_conf 1499837998652100004787664---1787334886687772357779999987503088999999995598289976 Q ss_pred HHHHHHHHHHHHHCCCC-CCCCHHHCCC----CCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEE---CCCCH Q ss_conf 76999999998751688-9997000356----6664121150112346530015655467402316525785---58706 Q gi|254780195|r 383 FGMQMAVIEAARNLAGI-PNACSTEFSE----AGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSL---KEETL 454 (544) Q Consensus 383 lGmQ~avIEfARnvlgl-~dAnStEf~~----~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l---~~~S~ 454 (544) T Consensus 101 NGFQIL~------E~GLLpG-----fDeDkPlaekPemAL~~N~~-----------------~rFisr~v~LrV~n~~T~ 152 (264) T TIGR01737 101 NGFQILV------EAGLLPG-----FDEDKPLAEKPEMALLPNAS-----------------LRFISRWVYLRVENADTA 152 (264) T ss_pred CHHHHHH------HHHHCCC-----CCCCCCCCCCCHHHHHCCCC-----------------CCCEEEEEEEEEEECCCH T ss_conf 6479999------9762489-----88788743571224420588-----------------974532036899856783 Q ss_pred HHHHHCCCEEEE---ECCC-CCCCC----HHHHHHHHHCC---CEEEE--------ECCCCCEEEE---EEECCCCEEEE Q ss_conf 688637984766---0252-33327----88998999789---59999--------8699986899---98389984999 Q gi|254780195|r 455 ISRIYGLDLIPE---RHRH-RYEVN----VRYREKLEGCG---LKFSG--------FSVDHALPEV---VEYINHPWFIG 512 (544) Q Consensus 455 ~~~iYg~~~I~E---RHRH-RYEvN----~~y~~~le~~G---l~~sg--------~~~d~~lvEi---iEl~~Hpffvg 512 (544) T Consensus 153 FT~~y~kGev~~~PiAHgEGrYy~~sGke~e~~~~l~~n~qivFrY~d~~G~~~e~~NPNGS~~nIAGi~N~~gn--V~G 230 (264) T TIGR01737 153 FTKKYKKGEVIRVPIAHGEGRYYADSGKEDETLAELESNDQIVFRYCDEDGDVSEEVNPNGSVDNIAGIVNEEGN--VLG 230 (264) T ss_pred HHHCCCCCCEEEEEEEECCCCEECCCCCCHHHHHHHHHCCEEEEEEECCCCCEECCCCCCCCCCCEEEEECCCCC--EEE T ss_conf 663579887887654425872662689975799998547918999767998532454789764671057808987--787 Q ss_pred EECCCCCC-----CC----CCCCCHHHHHHHHH Q ss_conf 72487732-----78----76988415899999 Q gi|254780195|r 513 VQYHPELK-----SR----PLDPHPLFVSFIQA 536 (544) Q Consensus 513 vQfHPEf~-----Sr----p~~phPLF~~fi~A 536 (544) T Consensus 231 mMPHPERA~~~~lg~r~eG~~DG~~Lf~~l~~~ 263 (264) T TIGR01737 231 MMPHPERASEKLLGSRREGADDGLKLFESLVEW 263 (264) T ss_pred ECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH T ss_conf 189807876454068875637799999999971 |
This entry describes the PurQ protein of Bacillus subtilis (where PurL, PurQ, and PurS are required for phosphoribosylformylglycinamidine synthase activity) and functionally equivalent proteins from other bacteria and archaea.; GO: 0004642 phosphoribosylformylglycinamidine synthase activity, 0006189 'de novo' IMP biosynthetic process, 0005737 cytoplasm. |
| >KOG0370 consensus | Back alignment and domain information |
|---|
Probab=98.07 E-value=2e-05 Score=59.74 Aligned_cols=146 Identities=25% Similarity=0.371 Sum_probs=86.7 Q ss_pred CCCEEEECCCCCCCCC-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCC Q ss_conf 6983997377786550-168889988740476322355769999999987516889997000356666412115011234 Q gi|254780195|r 346 GVHGILVPGGFGKRGS-EGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKG 424 (544) Q Consensus 346 ~~dGIlVPGGFG~RGi-eGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~ 424 (544) T Consensus 210 ~yDGlflSNGPGdPe~~~~~v~~vr~lL~~~~PvfGIClGHQllA----~-AaG---akT~K-----------mKyGN-- 268 (1435) T KOG0370 210 EYDGLFLSNGPGDPELCPLLVQNVRELLESNVPVFGICLGHQLLA----L-AAG---AKTYK-----------MKYGN-- 268 (1435) T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH----H-HHC---CCEEE-----------EECCC-- T ss_conf 556179727999905658999999999827998589736669999----8-608---74488-----------63155-- Q ss_pred CCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCC--EEEEECCCCCEEEEE Q ss_conf 653001565546740231652578558706688637984766025233327889989997895--999986999868999 Q gi|254780195|r 425 DQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYREKLEGCGL--KFSGFSVDHALPEVV 502 (544) Q Consensus 425 ~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl--~~sg~~~d~~lvEii 502 (544) T Consensus 269 -----------RG-----hNiP~~~~~t-------Grc~IT-SQNHGYAVD~~tLp----~gWk~lFvN~NDgS--NEGI 318 (1435) T KOG0370 269 -----------RG-----HNIPCTCRAT-------GRCFIT-SQNHGYAVDPATLP----AGWKPLFVNANDGS--NEGI 318 (1435) T ss_pred -----------CC-----CCCCCEECCC-------CEEEEE-ECCCCEEECCCCCC----CCCCHHEEECCCCC--CCEE T ss_conf -----------67-----7746220037-------659998-15776153453245----77703204135677--7337 Q ss_pred EECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC Q ss_conf 83899849997248773278769884158999999987644 Q gi|254780195|r 503 EYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVLYSQS 543 (544) Q Consensus 503 El~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aal~~~~~ 543 (544) T Consensus 319 ~Hss~P~f-SvQFHPEat~GP~DTeyLFDiFi~lvkk~kst 358 (1435) T KOG0370 319 MHSSKPFF-SVQFHPEATPGPHDTEYLFDVFIELVKKSKST 358 (1435) T ss_pred ECCCCCCE-EEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC T ss_conf 62798721-16307867899751399999999998887417 |
|
| >KOG1559 consensus | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00023 Score=52.08 Aligned_cols=171 Identities=23% Similarity=0.350 Sum_probs=88.3 Q ss_pred CCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHH--C-----CCCCHHHHHHHHHHHHHHHH--HHCCCCCCCCHHHC Q ss_conf 234456621698399737778655016888998874--0-----47632235576999999998--75168899970003 Q gi|254780195|r 337 KEDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFAR--E-----NKIPFLGICFGMQMAVIEAA--RNLAGIPNACSTEF 407 (544) Q Consensus 337 ~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai~yAR--e-----n~iP~LGIClGmQ~avIEfA--Rnvlgl~dAnStEf 407 (544) T Consensus 102 Ee~lfqklelvNGviftGGwak~~dY~~vvkkifnk~le~nDaGehFPvyg~CLGFE~lsmiISqnrdile~~d~--vd- 178 (340) T KOG1559 102 EEILFQKLELVNGVIFTGGWAKRGDYFEVVKKIFNKVLERNDAGEHFPVYGICLGFELLSMIISQNRDILERFDA--VD- 178 (340) T ss_pred HHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCC--CC- T ss_conf 899999998736057417432224099999999988876067866362124345389999998557068775032--02- Q ss_pred CCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCHHHH---HHHHH Q ss_conf 566664121150112346530015655467402316525785587066886379847660252333278899---89997 Q gi|254780195|r 408 SEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYR---EKLEG 484 (544) Q Consensus 408 ~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I~ERHRHRYEvN~~y~---~~le~ 484 (544) T Consensus 179 --------~AssLqF~~--------nvn~~~t~F------QrFPpELLkkL~~dcLvm--q~Hk~gisp~nF~~N~~Ls~ 234 (340) T KOG1559 179 --------VASSLQFVG--------NVNIHGTMF------QRFPPELLKKLSTDCLVM--QNHKFGISPKNFQGNPALSS 234 (340) T ss_pred --------CCCCEEEEC--------CCCEEEHHH------HHCCHHHHHHHCCCHHEE--ECCCCCCCHHHCCCCHHHHH T ss_conf --------135302303--------554001157------548999998735231100--03323446230457988997 Q ss_pred CCCEEEEECCCC---CEEEEEEECCCCEEEEEECCCC-----CCCCCCCCC---HHHHHHHHHH Q ss_conf 895999986999---8689998389984999724877-----327876988---4158999999 Q gi|254780195|r 485 CGLKFSGFSVDH---ALPEVVEYINHPWFIGVQYHPE-----LKSRPLDPH---PLFVSFIQAT 537 (544) Q Consensus 485 ~Gl~~sg~~~d~---~lvEiiEl~~HpffvgvQfHPE-----f~Srp~~ph---PLF~~fi~Aa 537 (544) T Consensus 235 -FFnilTT~~D~~~k~fvSTv~~~kYP-vtgfQWHPEKnafEWgss~-IpHsedAiqvtqhaA~ 295 (340) T KOG1559 235 -FFNILTTCTDGNSKTFVSTVESKKYP-VTGFQWHPEKNAFEWGSSD-IPHSEDAIQVTQHAAN 295 (340) T ss_pred -HHHHEEEECCCCCEEEEEEECCEECC-CEEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHH T ss_conf -87653330179850798852030124-1004566755743235577-9987217899999999 |
|
| >KOG0026 consensus | Back alignment and domain information |
|---|
Probab=97.68 E-value=8.9e-05 Score=55.05 Aligned_cols=172 Identities=19% Similarity=0.258 Sum_probs=84.3 Q ss_pred HHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHH--HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC Q ss_conf 87367241677225656723445662169839973777865501688--8998874047632235576999999998751 Q gi|254780195|r 319 VSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKI--AAIKFARENKIPFLGICFGMQMAVIEAARNL 396 (544) Q Consensus 319 ~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI--~Ai~yARen~iP~LGIClGmQ~avIEfARnv 396 (544) T Consensus 40 ~e~g~~~~VyRNDeiTV~E---l~-~~NP~~LliSPGPG~P~-DsGIs~~~i~~-f~~~iP~fGvCMGlQCi~e~fGGkv 113 (223) T KOG0026 40 GELGCHFEVYRNDELTVEE---LK-RKNPRGLLISPGPGTPQ-DSGISLQTVLE-LGPLVPLFGVCMGLQCIGEAFGGKI 113 (223) T ss_pred HCCCCCEEEEECCCCCHHH---HH-HCCCCCEEECCCCCCCC-CCCCHHHHHHH-HCCCCCEEEEEECHHHHHHHHCCEE T ss_conf 1258717998467311788---86-25988078569998976-45424899998-5787855656400344456528576 Q ss_pred CCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCH Q ss_conf 68899970003566664121150112346530015655467402316525785587066886379847660252333278 Q gi|254780195|r 397 AGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNV 476 (544) Q Consensus 397 lgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I~ERHRHRYEvN~ 476 (544) T Consensus 114 -----~~------a~~~i~HGK---------~S~i~~D~~~---~~G~f~-----g------~~q~~~V~RY-HSL---a 155 (223) T KOG0026 114 -----VR------SPFGVMHGK---------SSMVHYDEKG---EEGLFS-----G------LSNPFIVGRY-HSL---V 155 (223) T ss_pred -----EC------CCCCEEECC---------CCCCCCCCCC---CCCCCC-----C------CCCCEEEEEE-EEE---E T ss_conf -----30------575246245---------3332237754---332102-----7------9987277765-440---0 Q ss_pred HHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH Q ss_conf 899899978959999869998689998389984999724877327876988415899999 Q gi|254780195|r 477 RYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQA 536 (544) Q Consensus 477 ~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~A 536 (544) T Consensus 156 ~~~sSlP~d~L~VTawTEnG-~iMgaRHkKY~~ieGVQfHPESIl-teeGk~~irNflni 213 (223) T KOG0026 156 IEKDSFPSDELEVTAWTEDG-LVMAARHRKYKHIQGVQFHPESII-TTEGKTIVRNFIKI 213 (223) T ss_pred ECCCCCCHHHEEEEEECCCC-EEEEEECCCCEECCCEEECCHHHH-HHHHHHHHHHHHHH T ss_conf 01356871030456641385-788741233100232232607764-46658999999875 |
|
| >TIGR01368 CPSaseIIsmall carbamoyl-phosphate synthase, small subunit; InterPro: IPR006274 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-12 Score=112.11 Aligned_cols=252 Identities=21% Similarity=0.289 Sum_probs=179.7 Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH-HHCCCCHHHEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCC Q ss_conf 89999999974998768999238758999999998-64198867724038986202668988764948899998387888 Q gi|254780195|r 192 TQHSVKELQALGVHPDILLIRADRDIPEMERRKIS-LFCNVPMSAVIPALDVDDIYKVPLSYHREGIDSVVLNAFGIENV 270 (544) Q Consensus 192 TQhSVk~Lrs~GIqPDiivcRse~~l~~~~k~KIa-lfc~V~~~~Vi~~~Dv~sIY~VPl~l~~q~l~~~I~~~L~l~~~ 270 (544) T Consensus 121 TRaLv~~iR~~G~m~g~I~~~~~~--~~~~~~~~~f~~p~~~---------------------~~nLv~~Vst~~~~~~- 176 (383) T TIGR01368 121 TRALVKKIREKGTMKGVISTEDSN--DEELVEKAKFESPDID---------------------GINLVAEVSTKEPYTW- 176 (383) T ss_pred HHHHHHHHHHCCCEEEEEEECCCC--HHHHHHHHHHHCCCCC---------------------CCCCCCCEECCCCEEE- T ss_conf 799999986358547899606767--0356778654246757---------------------7652010011465560- Q ss_pred CCCCHHHHHHHHHHHCCCCCCEEEEEEH---HHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCC Q ss_conf 8620478999998741843437999952---0014813468888888888787367241677225656723445662169 Q gi|254780195|r 271 SLPQIDNWQTFCDRTLSLKNEVKVAIVG---KYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGV 347 (544) Q Consensus 271 ~~~~l~~W~~~~~~~~~~~~~V~IaiVG---KY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~ 347 (544) T Consensus 177 ~~~~~~~~~~~-~~~~~g~~~~~Vv~~DfG~K~--------nIlr~L~------~rG~~v~vVP~~~----~~~~i~~~~ 237 (383) T TIGR01368 177 GQGTWNLWKFF-VAKRNGKKPLRVVVIDFGVKQ--------NILRRLV------KRGCEVTVVPYDT----DAEEIKKYN 237 (383) T ss_pred CCCCCHHHHHH-HHCCCCCCCEEEEEEECCCCH--------HHHHHHH------HCCCEEEEECCCC----CHHHHHHHC T ss_conf 68864166432-211368973599998558875--------5898997------6698799967899----889998657 Q ss_pred -CEEEECCCCCCC--CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC--CCCCCEECCCHHC Q ss_conf -839973777865--50168889988740476322355769999999987516889997000356--6664121150112 Q gi|254780195|r 348 -HGILVPGGFGKR--GSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSE--AGVPVIALMSEWM 422 (544) Q Consensus 348 -dGIlVPGGFG~R--GieGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~--~~~pvI~~l~e~~ 422 (544) T Consensus 238 PDGiflSNGPGDPH~~~~~~i~~~~~l~~~~~P~fGICLGHQllALA~Ga~TyKlK------FGHRG~NhPV~~~~~g-- 309 (383) T TIGR01368 238 PDGIFLSNGPGDPHAAVEPAIETVRELLEAKIPIFGICLGHQLLALAFGAKTYKLK------FGHRGGNHPVKDLRTG-- 309 (383) T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEECC------CCCCCCCCCEEECCCC-- T ss_conf 88899908798805678999999999984489710026668999997388700046------5678875131442798-- Q ss_pred CCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEE Q ss_conf 34653001565546740231652578558706688637984766025233327889989997895999986999868999 Q gi|254780195|r 423 KGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVV 502 (544) Q Consensus 423 ~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEii 502 (544) T Consensus 310 -----------------------~v~IT----------------sQNHGyAVD~~sl---~~~~~~~th~nLNDgt~EG~ 347 (383) T TIGR01368 310 -----------------------RVEIT----------------SQNHGYAVDEESL---LAGDLEVTHVNLNDGTVEGI 347 (383) T ss_pred -----------------------EEEEE----------------EECCCEECCHHHC---CCCCEEEEEEECCCCCCCCC T ss_conf -----------------------79999----------------7068712575355---78853899983597933153 Q ss_pred EECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 83899849997248773278769884158999999 Q gi|254780195|r 503 EYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQAT 537 (544) Q Consensus 503 El~~HpffvgvQfHPEf~Srp~~phPLF~~fi~Aa 537 (544) T Consensus 348 ~h~~~P~-fSVQyHPEA~PGPhD~~~lFd~F~~~~ 381 (383) T TIGR01368 348 RHKDLPV-FSVQYHPEASPGPHDTEYLFDEFIDLI 381 (383) T ss_pred CCCCCCE-EEEECCCCCCCCCHHHHHHHHHHHHHH T ss_conf 0058786-677006888887002379999999998 |
CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates , . CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate . The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain . CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites . The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein . The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP . There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia . CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains . This entry represents the small subunit of the glutamine-dependent form (6.3.5.5 from EC) of carbamoyl phosphate synthase, CPSase II. The small subunit catalyses the hydrolysis of glutamine to ammonia, which in turn used by the large chain to synthesize carbamoyl phosphate. The C-terminal domain of the small subunit of CPSase has glutamine amidotransferase activity. Note that the sequence from the mammalian urea cycle form has lost the active site Cys, resulting in an ammonia-dependent form, CPSase I (6.3.4.16 from EC). CPSases of pyrimidine biosynthesis, arginine biosynthesis, and the urea cycle may be encoded by one or by several genes, depending on the species. ; GO: 0004086 carbamoyl-phosphate synthase activity, 0006807 nitrogen compound metabolic process. |
| >CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.7e-12 Score=107.54 Aligned_cols=261 Identities=19% Similarity=0.270 Sum_probs=157.7 Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCC Q ss_conf 89999999974998768999238758999999998641988677240389862026689887649488999983878888 Q gi|254780195|r 192 TQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPALDVDDIYKVPLSYHREGIDSVVLNAFGIENVS 271 (544) Q Consensus 192 TQhSVk~Lrs~GIqPDiivcRse~~l~~~~k~KIalfc~V~~~~Vi~~~Dv~sIY~VPl~l~~q~l~~~I~~~L~l~~~~ 271 (544) T Consensus 118 TRaLTk~IR~~G~m~g~I-~-~~~~~~~~l~~~~~~~~~~~~~dLv~~VSt~~~y~~----------------------~ 173 (383) T CHL00197 118 TRALVRHLRRFGTMNGCI-S-NQNLNLSYLEAKIKELPSMEGLDLAPSVTTSSYYEW----------------------D 173 (383) T ss_pred HHHHHHHHHHCCCCEEEE-E-CCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEE----------------------C T ss_conf 899999999649824999-0-798998999999874899657854248516887770----------------------6 Q ss_pred CCCHHHHHHHHHHHC-CCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHH-CCCCE Q ss_conf 620478999998741-8434379999520014813468888888888787367241677225656723445662-16983 Q gi|254780195|r 272 LPQIDNWQTFCDRTL-SLKNEVKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHF-YGVHG 349 (544) Q Consensus 272 ~~~l~~W~~~~~~~~-~~~~~V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L-~~~dG 349 (544) T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~VvviD~-----GiK~nILr~L~~----~g--~~v~VvP~~~----~~~~I~~~~PDG 238 (383) T CHL00197 174 EPSHPKWFYLADNKRPHSSYPLRIIVIDF-----GVKYNILRRLKS----FG--CEITIVPATS----TYQDIMAYQPDG 238 (383) T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEC-----CCCHHHHHHHHH----CC--CEEEEECCCC----CCCHHHCCCCCE T ss_conf 88765432134344458888745999967-----771889999997----89--9899989998----511342568888 Q ss_pred EEECCCCCCC-CCHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCC Q ss_conf 9973777865-50168889988740-476322355769999999987516889997000356666412115011234653 Q gi|254780195|r 350 ILVPGGFGKR-GSEGKIAAIKFARE-NKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQ 427 (544) Q Consensus 350 IlVPGGFG~R-GieGkI~Ai~yARe-n~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~ 427 (544) T Consensus 239 IfLSNGPGDP~~~~~~i~~i~~li~~~~iPifGICLGHQlLalA-----~Gak----T----------~Kmkf------- 292 (383) T CHL00197 239 ILLSNGPGDPSTVHYGIKTVKKLIKKANIPIFGICMGHQILSLA-----LEAK----T----------FKLKF------- 292 (383) T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHH-----CCCE----E----------EECCC------- T ss_conf 99789999978989999999999964899789955889999997-----3983----7----------56688------- Q ss_pred CCCCCCCCCCCEEEECCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCC Q ss_conf 00156554674023165257855870668863798476602523332788998999789599998699986899983899 Q gi|254780195|r 428 EKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINH 507 (544) Q Consensus 428 ~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~H 507 (544) T Consensus 293 ------GH-----rG~NhPV~~---------t~kv~IT-SQNHGyaVd~~---sl~~~~~~vt~~nlnD~tvEG~~~~~~ 348 (383) T CHL00197 293 ------GH-----RGLNHPSGL---------NQQVEIT-SQNHGFAVNAE---SLAKNKVYVTHFNLNDGTVAGISHSPK 348 (383) T ss_pred ------CC-----CCCCCCCCC---------CCCEEEE-ECCCCEEECCC---CCCCCCCEEEEECCCCCCCCCEEECCC T ss_conf ------87-----798866015---------8757996-27876176744---478873189999388896148698899 Q ss_pred CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH Q ss_conf 84999724877327876988415899999998764 Q gi|254780195|r 508 PWFIGVQYHPELKSRPLDPHPLFVSFIQATVLYSQ 542 (544) Q Consensus 508 pffvgvQfHPEf~Srp~~phPLF~~fi~Aal~~~~ 542 (544) T Consensus 349 p~-fsvQfHPEa~pGP~Ds~~lF~~F~~~~~~~k~ 382 (383) T CHL00197 349 PY-FSVQYHPEASPGPHDADYLFEYFIEIMKHSKS 382 (383) T ss_pred CE-EEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC T ss_conf 87-88774889898987308899999999997618 |
|
| >PRK13527 glutamine amidotransferase subunit PdxT; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2e-13 Score=117.39 Aligned_cols=84 Identities=21% Similarity=0.382 Sum_probs=61.5 Q ss_pred EEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC-CCC--C--CCHHHHHH Q ss_conf 999952001481346888888888878736724167722565672344566216983997377-786--5--50168889 Q gi|254780195|r 293 KVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG-FGK--R--GSEGKIAA 367 (544) Q Consensus 293 ~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG-FG~--R--GieGkI~A 367 (544) T Consensus 2 ~igv----lalqG~~~~hi~sl~kAl~~lg~~~e~~~v~~--------p~~l~~~d~LILPGG~f~~~m~~L~~~gl~~~ 69 (196) T PRK13527 2 KIGV----LALQGDVEEHIDALKRALDELGINGEVVRVRR--------PEDLKDCDALIIPGGESTTIGRLMKRYGILDE 69 (196) T ss_pred EEEE----EEECCCHHHHHHHHHHHHHHCCCCCEEEEECC--------HHHHHCCCEEEECCCCHHHHHHHHHHCCCHHH T ss_conf 5999----97247999999999999998299905999699--------89983199799899667999999888688899 Q ss_pred HHHHHCCCCCHHHHHHHHHHH Q ss_conf 988740476322355769999 Q gi|254780195|r 368 IKFARENKIPFLGICFGMQMA 388 (544) Q Consensus 368 i~yARen~iP~LGIClGmQ~a 388 (544) T Consensus 70 i~~~i~~g~PiLGIClGmQLL 90 (196) T PRK13527 70 IKEKIEEGLPILGTCAGLILL 90 (196) T ss_pred HHHHHHCCCCEEEECHHHHHH T ss_conf 999997699779970879998 |
|
| >pfam01174 SNO SNO glutamine amidotransferase family | Back alignment and domain information |
|---|
Probab=99.48 E-value=2e-13 Score=117.43 Aligned_cols=73 Identities=21% Similarity=0.388 Sum_probs=49.8 Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCC-----HHHHHHH-HHHHCCC Q ss_conf 481346888888888878736724167722565672344566216983997377786550-----1688899-8874047 Q gi|254780195|r 302 HLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGS-----EGKIAAI-KFARENK 375 (544) Q Consensus 302 ~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGi-----eGkI~Ai-~yARen~ 375 (544) T Consensus 3 alqGNl~sv~nal~~lG~e------~~~v~-------~-p~di~~ad~LILPGg~s~~~~~ll~~~gl~~~l~e~i~~~~ 68 (188) T pfam01174 3 ALQGAVEEHEEAIKKCGAE------NKTVK-------R-PEDLAQCDALIIPGGESTAMSLLAKRYGFYEPLYEFVHNPN 68 (188) T ss_pred CCCCCHHHHHHHHHHCCCC------EEEEC-------C-HHHHHCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCC T ss_conf 3235899999999986998------79968-------9-99994089899889887999999998688899999998079 Q ss_pred CCHHHHHHHHHHH Q ss_conf 6322355769999 Q gi|254780195|r 376 IPFLGICFGMQMA 388 (544) Q Consensus 376 iP~LGIClGmQ~a 388 (544) T Consensus 69 kPiLGIClGMqLL 81 (188) T pfam01174 69 KPIWGTCAGLILL 81 (188) T ss_pred CCEEEHHHHHHHH T ss_conf 9663331446421 |
This family and its amidotransferase domain was first described in. It is predicted that members of this family are involved in the pyridoxine biosynthetic pathway, based on the proximity and co-regulation of the corresponding genes and physical interaction between the members of pfam01174 and pfam01680. |
| >PRK13525 glutamine amidotransferase subunit PdxT; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.8e-13 Score=115.37 Aligned_cols=79 Identities=23% Similarity=0.442 Sum_probs=52.4 Q ss_pred EEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCC-C--CC--CHHHHH Q ss_conf 799995200148134688888888887873672416772256567234456621698399737778-6--55--016888 Q gi|254780195|r 292 VKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFG-K--RG--SEGKIA 366 (544) Q Consensus 292 V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG-~--RG--ieGkI~ 366 (544) T Consensus 2 ~~IGvl----~~qGn~rs~~~aL~~lG~~------~~~v-------~~-~~di~~ad~lILPGG~s~am~~ll~~~gl~~ 63 (191) T PRK13525 2 MKIGVL----ALQGAVREHIAALEALGAE------AVEV-------RR-PEDLDEIDGLILPGGESTTMGKLLRDFGLLE 63 (191) T ss_pred CEEEEE----ECCCCHHHHHHHHHHCCCC------EEEE-------CC-HHHHHHCCEEEECCCCHHHHHHHHHHCCCHH T ss_conf 379999----6478899999999987997------8998-------99-9999539989978976589999999868689 Q ss_pred HHHHHHCCCCCHHHHHHHHHHH Q ss_conf 9988740476322355769999 Q gi|254780195|r 367 AIKFARENKIPFLGICFGMQMA 388 (544) Q Consensus 367 Ai~yARen~iP~LGIClGmQ~a 388 (544) T Consensus 64 ~i~~~i~~gkP~LGIClGmqLL 85 (191) T PRK13525 64 PLREFIASGLPVFGTCAGMILL 85 (191) T ss_pred HHHHHHHCCCCEEEECHHHHEE T ss_conf 9999998499857622212111 |
|
| >cd01749 GATase1_PB Glutamine Amidotransferase (GATase_I) involved in pyridoxine biosynthesis | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.1e-11 Score=102.88 Aligned_cols=74 Identities=23% Similarity=0.491 Sum_probs=48.5 Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC-CCC--CCC--HHHHHHHHHHHCCC Q ss_conf 1481346888888888878736724167722565672344566216983997377-786--550--16888998874047 Q gi|254780195|r 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG-FGK--RGS--EGKIAAIKFARENK 375 (544) Q Consensus 301 ~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG-FG~--RGi--eGkI~Ai~yARen~ 375 (544) T Consensus 4 l~lqGn~~s~~~Al~~lG~------~~~~~-------~~-p~~i~~ad~LILPGg~s~~~~~~L~~~gl~~~i~~~i~~g 69 (183) T cd01749 4 LALQGDFREHIRALERLGV------EVIEV-------RT-PEDLEGIDGLIIPGGESTTIGKLLRRTGLLDPLREFIRAG 69 (183) T ss_pred EEECCCHHHHHHHHHHCCC------CEEEE-------CC-HHHHHHCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCC T ss_conf 9834789999999998799------79998-------99-9998318989988940899999998878889999999849 Q ss_pred CCHHHHHHHHHHH Q ss_conf 6322355769999 Q gi|254780195|r 376 IPFLGICFGMQMA 388 (544) Q Consensus 376 iP~LGIClGmQ~a 388 (544) T Consensus 70 kP~LGIClGMQlL 82 (183) T cd01749 70 KPVFGTCAGLILL 82 (183) T ss_pred CCEEEHHHHHHHH T ss_conf 9847510778887 |
Glutamine Amidotransferase (GATase_I) involved in pyridoxine biosynthesis. Glutamine amidotransferase (GATase) activity involves the removal of the ammonia group from a glutamate molecule and its subsequent transfer to a specific substrate, thus creating a new carbon-nitrogen group on the substrate. This group contains proteins like Bacillus subtilus YaaE and Plasmodium falciparum Pdx2 which are members of the triad glutamine aminotransferase family and function in a pathway for the biosynthesis of vitamin B6. |
| >cd01740 GATase1_FGAR_AT Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase | Back alignment and domain information |
|---|
Probab=97.92 E-value=2e-05 Score=59.77 Aligned_cols=71 Identities=30% Similarity=0.410 Sum_probs=48.6 Q ss_pred HHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCC--HHHHHH--------HHHHHCCCCCHHH Q ss_conf 888888878736724167722565672344566216983997377786550--168889--------9887404763223 Q gi|254780195|r 311 IEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGS--EGKIAA--------IKFARENKIPFLG 380 (544) Q Consensus 311 ~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGi--eGkI~A--------i~yARen~iP~LG 380 (544) T Consensus 16 ~~Af~~a----G~~~~~V~~~dl~-~~---~~~L~~~~~lv~pGGFSyGD~l~ag~~~a~s~~~~~~l~~f~~~g~~vLG 87 (238) T cd01740 16 AYAFELA----GFEAEDVWHNDLL-AG---RKDLDDYDGVVLPGGFSYGDYLRAGAIAAASPLLMEEVKEFAERGGLVLG 87 (238) T ss_pred HHHHHHC----CCCEEEEEECCCC-CC---CCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEE T ss_conf 9999986----9926999810165-66---46611075899868667766655567887481130899997548974898 Q ss_pred HHHHHHHHH Q ss_conf 557699999 Q gi|254780195|r 381 ICFGMQMAV 389 (544) Q Consensus 381 IClGmQ~av 389 (544) T Consensus 88 ICNGfQiL~ 96 (238) T cd01740 88 ICNGFQILV 96 (238) T ss_pred ECHHHHHHH T ss_conf 530567888 |
Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase (FGAR-AT). FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, Pi, and glutamate in the fourth step of the purine biosynthetic pathway. FGAR-AT is a glutamine amidotransferase. Glutamine amidotransferase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. FGAR-AT belongs to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site |
| >COG0311 PDX2 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00012 Score=54.01 Aligned_cols=79 Identities=23% Similarity=0.489 Sum_probs=52.5 Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCC-----CCHHHHHHHHHHHCCCCC Q ss_conf 813468888888888787367241677225656723445662169839973777865-----501688899887404763 Q gi|254780195|r 303 LKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKR-----GSEGKIAAIKFARENKIP 377 (544) Q Consensus 303 l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~R-----GieGkI~Ai~yARen~iP 377 (544) T Consensus 8 lQG~v~EH~~~l~~~~-----~~e~~~Vk-------~-~~dL~~~d~LIiPGGESTTi~rL~~~~gl~e~l~~~~~~G~P 74 (194) T COG0311 8 LQGAVEEHLEALEKAG-----GAEVVEVK-------R-PEDLEGVDGLIIPGGESTTIGRLLKRYGLLEPLREFIADGLP 74 (194) T ss_pred ECCCHHHHHHHHHHHC-----CCCEEEEC-------C-HHHHCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCC T ss_conf 5046899999998605-----87359971-------7-788553767895495078999999873848999999976996 Q ss_pred HHHHHHHHHHHHHHHHHHCCC Q ss_conf 223557699999999875168 Q gi|254780195|r 378 FLGICFGMQMAVIEAARNLAG 398 (544) Q Consensus 378 ~LGIClGmQ~avIEfARnvlg 398 (544) T Consensus 75 v~GTCAGlIlL----akei~~ 91 (194) T COG0311 75 VFGTCAGLILL----AKEILD 91 (194) T ss_pred EEEECHHHHHH----HHHHCC T ss_conf 47751425653----465508 |
|
| >cd01653 GATase1 Type 1 glutamine amidotransferase (GATase1)-like domain | Back alignment and domain information |
|---|
Probab=97.75 E-value=7e-05 Score=55.80 Aligned_cols=79 Identities=27% Similarity=0.455 Sum_probs=63.4 Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCC----HHHHHHHHHHHCCCCCH Q ss_conf 81346888888888878736724167722565672344566216983997377786550----16888998874047632 Q gi|254780195|r 303 LKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGS----EGKIAAIKFARENKIPF 378 (544) Q Consensus 303 l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGi----eGkI~Ai~yARen~iP~ 378 (544) T Consensus 10 ~~~~~~~~~~~l~~~~------~~~~~i~~~~~~~~~-~~~~~~~d~liipgg~~~~~~~~~~~~~~~~~~~~~~~~~~i 82 (115) T cd01653 10 EELELASPLDALREAG------AEVDVVSPDGGPVES-DVDLDDYDGLILPGGPGTPDDLARDEALLALLREAAAAGKPI 82 (115) T ss_pred CHHHHHHHHHHHHHCC------CEEEEEECCCCCCCC-CCCHHCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHCCCEE T ss_conf 2899999999999779------979999658998666-576200899998998632999863999999999999869989 Q ss_pred HHHHHHHHHH Q ss_conf 2355769999 Q gi|254780195|r 379 LGICFGMQMA 388 (544) Q Consensus 379 LGIClGmQ~a 388 (544) T Consensus 83 ~~~c~g~~~l 92 (115) T cd01653 83 LGICLGAQLL 92 (115) T ss_pred EEECHHHHHH T ss_conf 9988588999 |
Type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA. and, the A4 beta-galactosidase middle domain. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-depende |
| >cd03128 GAT_1 Type 1 glutamine amidotransferase (GATase1)-like domain | Back alignment and domain information |
|---|
Probab=97.67 E-value=9.1e-05 Score=55.00 Aligned_cols=87 Identities=25% Similarity=0.375 Sum_probs=64.6 Q ss_pred EEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCC----HHHHHHHHH Q ss_conf 9952001481346888888888878736724167722565672344566216983997377786550----168889988 Q gi|254780195|r 295 AIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGS----EGKIAAIKF 370 (544) Q Consensus 295 aiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGi----eGkI~Ai~y 370 (544) T Consensus 2 ~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~d~vii~gg~~~~~~~~~~~~~~~~i~~ 74 (92) T cd03128 2 AVLLFGGSEELELASPLDALREAG------AEVDVVSPDGGPVES-DVDLDDYDGLILPGGPGTPDDLAWDEALLALLRE 74 (92) T ss_pred EEEECCCCCHHHHHHHHHHHHHCC------CEEEEEECCCCCCCC-CCCHHHCCEEEECCCCCCCCCCHHCHHHHHHHHH T ss_conf 899569945899999999999779------979999538996445-3686458899978998664210109899999999 Q ss_pred HHCCCCCHHHHHHHHHHH Q ss_conf 740476322355769999 Q gi|254780195|r 371 ARENKIPFLGICFGMQMA 388 (544) Q Consensus 371 ARen~iP~LGIClGmQ~a 388 (544) T Consensus 75 ~~~~~~~i~~~c~G~~~l 92 (92) T cd03128 75 AAAAGKPVLGICLGAQLL 92 (92) T ss_pred HHHCCCEEEEECCHHHHC T ss_conf 998799799999047539 |
Type 1 glutamine amidotransferase (GATase1)-like domain. This group contains proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA, the A4 beta-galactosidase middle domain and peptidase E. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamin |
| >PRK13526 glutamine amidotransferase subunit PdxT; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.0053 Score=42.28 Aligned_cols=75 Identities=20% Similarity=0.445 Sum_probs=43.4 Q ss_pred EEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCC--------CCCCCHH Q ss_conf 79999520014813468888888888787367241677225656723445662169839973777--------8655016 Q gi|254780195|r 292 VKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGF--------GKRGSEG 363 (544) Q Consensus 292 V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGF--------G~RGieG 363 (544) T Consensus 3 ~kIGVL----aLQG~~~eH~~~l~~l------g~~~~~Vr~--------~~dL~~idgLIiPGGESTti~~ll~~~~L~~ 64 (179) T PRK13526 3 QKVGVL----AIQGGYQKHADMFKSL------GVEVKLVKF--------NNDFDSIDRLVIPGGESTTLLNLLNKHQIFD 64 (179) T ss_pred EEEEEE----EECCCHHHHHHHHHHC------CCCEEEECC--------HHHHHCCCEEEECCCCHHHHHHHHHHCCCHH T ss_conf 389999----9628879999999987------996899717--------8886007758975997789999976755499 Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHH Q ss_conf 8889988740476322355769999 Q gi|254780195|r 364 KIAAIKFARENKIPFLGICFGMQMA 388 (544) Q Consensus 364 kI~Ai~yARen~iP~LGIClGmQ~a 388 (544) T Consensus 65 ~l~--~~~~~--~Pv~GTCAGlILL 85 (179) T PRK13526 65 KLY--NFCSS--KPVFGTCAGSIIL 85 (179) T ss_pred HHH--HHHHC--CCEEEECCEEEEE T ss_conf 999--99858--9908861206898 |
|
| >KOG3210 consensus | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.24 Score=30.33 Aligned_cols=78 Identities=19% Similarity=0.288 Sum_probs=51.7 Q ss_pred CCCCHHHHHHHHHHHHHHHHHC--CCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHH------HHHH Q ss_conf 1481346888888888878736--7241677225656723445662169839973777865501688899------8874 Q gi|254780195|r 301 IHLKDAYRSLIEALRHSGVSNY--TKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIAAI------KFAR 372 (544) Q Consensus 301 ~~l~DaY~Si~EAL~hA~~~~~--~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~Ai------~yAR 372 (544) T Consensus 17 LALQGAFiEH~N~~~~c~~en~y~Ik~~~~tVKT--------~~D~aq~DaLIIPGGES--T~mslia~~tgL~d~L~~f 86 (226) T KOG3210 17 LALQGAFIEHVNHVEKCIVENRYEIKLSVMTVKT--------KNDLAQCDALIIPGGES--TAMSLIAERTGLYDDLYAF 86 (226) T ss_pred EEHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC--------HHHHHHCCEEEECCCCC--HHHHHHHHHHHHHHHHHHH T ss_conf 1021578998878877530586267888886157--------77786577778339850--2678887441017779998 Q ss_pred CC--CCCHHHHHHHHHHH Q ss_conf 04--76322355769999 Q gi|254780195|r 373 EN--KIPFLGICFGMQMA 388 (544) Q Consensus 373 en--~iP~LGIClGmQ~a 388 (544) T Consensus 87 Vhn~~k~~WGTCAGmI~L 104 (226) T KOG3210 87 VHNPSKVTWGTCAGMIYL 104 (226) T ss_pred HCCCCCCEEEECHHHHHH T ss_conf 448886403410225310 |
|
| >PRK05297 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.27 Score=29.91 Aligned_cols=73 Identities=22% Similarity=0.300 Sum_probs=41.7 Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHH--H--HHHHH---HHH-------- Q ss_conf 88888888887873672416772256567234456621698399737778655016--8--88998---874-------- Q gi|254780195|r 308 RSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEG--K--IAAIK---FAR-------- 372 (544) Q Consensus 308 ~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieG--k--I~Ai~---yAR-------- 372 (544) T Consensus 1053 ~EmAaAF~~AGF~~~------DVhmsDL~~g--~~~L~~f~glva~GGFSyGDvlGsgkGwA~sil~N~~~r~~f~~Ff~ 1124 (1294) T PRK05297 1053 VEMAAAFDRAGFDAI------DVHMSDLLAG--RVTLEDFKGLVACGGFSYGDVLGAGEGWAKSILFNPRLRDQFAAFFA 1124 (1294) T ss_pred HHHHHHHHHCCCCEE------EEEHHHCCCC--CCCHHHCCEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHC T ss_conf 999999998699348------8652310036--11787791899878768767775678999999729999999999973 Q ss_pred CCCCCHHHHHHHHHHH Q ss_conf 0476322355769999 Q gi|254780195|r 373 ENKIPFLGICFGMQMA 388 (544) Q Consensus 373 en~iP~LGIClGmQ~a 388 (544) T Consensus 1125 r~DtfsLGICNGcQ~L 1140 (1294) T PRK05297 1125 RPDTFALGVCNGCQMM 1140 (1294) T ss_pred CCCCEEEEEEHHHHHH T ss_conf 9994599953889999 |
|
| >PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.089 Score=33.43 Aligned_cols=86 Identities=20% Similarity=0.201 Sum_probs=51.2 Q ss_pred EEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC-----C----HHHHHCCCCEEEECCCCCCCCCH Q ss_conf 79999520014813468888888888787367241677225656723-----4----45662169839973777865501 Q gi|254780195|r 292 VKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKE-----D----PVKHFYGVHGILVPGGFGKRGSE 362 (544) Q Consensus 292 V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~-----~----~~~~L~~~dGIlVPGGFG~RGie 362 (544) T Consensus 1 MKIaIigk~~~-~~~-~~~~~~Li~~L~~~g~~v~le~~~a~~l~~~~~~~~~~~~~~~~~~~~~Dlvi~iGGDGT---- 74 (290) T PRK01911 1 MKIAIFGQTYQ-ASK-SPHIKRLFELLEEHGAEIYIEEEFLNFLTQDLKFEPKYKGFFDGNNFDFDMVISIGGDGT---- 74 (290) T ss_pred CEEEEECCCCC-HHH-HHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCHH---- T ss_conf 99999888898-479-999999999999889989997689787765125664312321135777779999787689---- Q ss_pred HHHHHHHHHHCCCCCHHHHHHH Q ss_conf 6888998874047632235576 Q gi|254780195|r 363 GKIAAIKFARENKIPFLGICFG 384 (544) Q Consensus 363 GkI~Ai~yARen~iP~LGIClG 384 (544) T Consensus 75 -~L~a~~~~~~~~iPilGiN~G 95 (290) T PRK01911 75 -FLRAAARVGNSGIPILGINTG 95 (290) T ss_pred -HHHHHHHHHHCCCCEEEEECC T ss_conf -999999861259968999448 |
|
| >PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.14 Score=32.07 Aligned_cols=86 Identities=20% Similarity=0.204 Sum_probs=51.1 Q ss_pred EEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC-----CCHHHHHCCCCEEEECCCCCCCCCHHHHH Q ss_conf 7999952001481346888888888878736724167722565672-----34456621698399737778655016888 Q gi|254780195|r 292 VKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEK-----EDPVKHFYGVHGILVPGGFGKRGSEGKIA 366 (544) Q Consensus 292 V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~-----~~~~~~L~~~dGIlVPGGFG~RGieGkI~ 366 (544) T Consensus 5 k~vgIv~k~-~~~~a-~~~~~~l~~~L~~~gi~v~ld~~~a~~~~~~~~~~~~~~~~~~~~Dlii~lGGDGT-----~L~ 77 (296) T PRK01231 5 RNIGLIGRL-GSSQV-VETLRRLKRFLLDRHLHVILEEETAEVLPGHGLQTVSRKLLGEVCDLVIVVGGDGS-----LLG 77 (296) T ss_pred CEEEEEEEC-CCHHH-HHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCHHHCCCCEEEEEEECCCCH-----HHH T ss_conf 899999848-98799-99999999999878899999324776658788662453341653049999578728-----999 Q ss_pred HHHHHHCCCCCHHHHHHH Q ss_conf 998874047632235576 Q gi|254780195|r 367 AIKFARENKIPFLGICFG 384 (544) Q Consensus 367 Ai~yARen~iP~LGIClG 384 (544) T Consensus 78 ~~~~~~~~~~PilGiN~G 95 (296) T PRK01231 78 AARALARHNVPVLGINRG 95 (296) T ss_pred HHHHHCCCCCCEEEEECC T ss_conf 999960369978988558 |
|
| >PRK04759 consensus | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.16 Score=31.51 Aligned_cols=83 Identities=23% Similarity=0.195 Sum_probs=49.9 Q ss_pred EEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECC---CCCCC------CCHHHHHCCCCEEEECCCCCCCCCH Q ss_conf 79999520014813468888888888787367241677225---65672------3445662169839973777865501 Q gi|254780195|r 292 VKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDA---ETLEK------EDPVKHFYGVHGILVPGGFGKRGSE 362 (544) Q Consensus 292 V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIds---e~le~------~~~~~~L~~~dGIlVPGGFG~RGie 362 (544) T Consensus 6 ~~I~Iv~k~-~~~~~~~~~~~l~~-~L~~~g~~---v~vd~~~~~~l~~~~~~~~~~~~~l~~~~Dlvi~lGGDGT---- 76 (294) T PRK04759 6 NVIAIIGKP-RDQQAIQTHKELYH-WLTSLGYT---VFIDDRLAAILTDVPQEHFASLVELGKKADLAIVVGGDGN---- 76 (294) T ss_pred CEEEEEEEC-CCHHHHHHHHHHHH-HHHHCCCE---EEECHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEECCCHH---- T ss_conf 799999417-99799999999999-99868999---9991688655334772223775563766568999847858---- Q ss_pred HHHHHHHHHHCCCCCHHHHHHH Q ss_conf 6888998874047632235576 Q gi|254780195|r 363 GKIAAIKFARENKIPFLGICFG 384 (544) Q Consensus 363 GkI~Ai~yARen~iP~LGIClG 384 (544) T Consensus 77 -lL~aar~~~~~~~PilgiN~G 97 (294) T PRK04759 77 -MLGAARVLSRFDISVIGVNRG 97 (294) T ss_pred -HHHHHHHHCCCCCCEEEEECC T ss_conf -999999860169968988458 |
|
| >PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.17 Score=31.45 Aligned_cols=83 Identities=19% Similarity=0.138 Sum_probs=50.7 Q ss_pred EEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCC---CCCC-----CCHHHHHCCCCEEEECCCCCCCCCHH Q ss_conf 799995200148134688888888887873672416772256---5672-----34456621698399737778655016 Q gi|254780195|r 292 VKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAE---TLEK-----EDPVKHFYGVHGILVPGGFGKRGSEG 363 (544) Q Consensus 292 V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse---~le~-----~~~~~~L~~~dGIlVPGGFG~RGieG 363 (544) T Consensus 6 k~IgIi~k~-~~~~a~~-~~~~l~--~~L~~~g~~-v~ld~~~a~~l~~~~~~~~~~~~~~~~~Dlvi~lGGDGT----- 75 (292) T PRK03378 6 KCIGIVGHP-RHPTALT-THEMLY--RWLCTKGYE-VIVEQQIAHELQLKNVKTGTLAEIGQQADLAVVVGGDGN----- 75 (292) T ss_pred CEEEEEEEC-CCHHHHH-HHHHHH--HHHHHCCCE-EEECHHHHHHCCCCCCCCCCHHHHCCCCCEEEEECCCHH----- T ss_conf 899999527-9858999-999999--999978998-998347876529986554786685305689999777889----- Q ss_pred HHHHHHHHHCCCCCHHHHHHH Q ss_conf 888998874047632235576 Q gi|254780195|r 364 KIAAIKFARENKIPFLGICFG 384 (544) Q Consensus 364 kI~Ai~yARen~iP~LGIClG 384 (544) T Consensus 76 ~L~aar~~~~~~~PilGIN~G 96 (292) T PRK03378 76 MLGAARTLARYDIKVIGINRG 96 (292) T ss_pred HHHHHHHHCCCCCCEEEEECC T ss_conf 999999854369968988379 |
|
| >PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.21 Score=30.79 Aligned_cols=86 Identities=15% Similarity=0.078 Sum_probs=51.7 Q ss_pred EEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC----------CCHHHHHCCCCEEEECCCCCCCCC Q ss_conf 7999952001481346888888888878736724167722565672----------344566216983997377786550 Q gi|254780195|r 292 VKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEK----------EDPVKHFYGVHGILVPGGFGKRGS 361 (544) Q Consensus 292 V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~----------~~~~~~L~~~dGIlVPGGFG~RGi 361 (544) T Consensus 6 k~Igiv~k~~-~~~~~~~~~~l~~~L-~~~g~~v~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlii~lGGDGT--- 80 (296) T PRK04539 6 HNIGIVTRPN-TPDIQDTAHTLITFL-KQHGFTVYLDEVGVKEGCIYTQDTVGCHIVNKTELGQYCDLVAVLGGDGT--- 80 (296) T ss_pred CEEEEEEECC-CHHHHHHHHHHHHHH-HHCCCEEEEECCHHHHCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCHH--- T ss_conf 7899997089-879999999999999-97879999965411203546433456554686781646779999787089--- Q ss_pred HHHHHHHHHHHCCCCCHHHHHHH Q ss_conf 16888998874047632235576 Q gi|254780195|r 362 EGKIAAIKFARENKIPFLGICFG 384 (544) Q Consensus 362 eGkI~Ai~yARen~iP~LGIClG 384 (544) T Consensus 81 --lL~a~r~~~~~~~PilGiN~G 101 (296) T PRK04539 81 --FLSVAREIAPRAVPIIGINQG 101 (296) T ss_pred --HHHHHHHHHHCCCCEEEEECC T ss_conf --999999860059978998447 |
|
| >PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.18 Score=31.22 Aligned_cols=82 Identities=22% Similarity=0.131 Sum_probs=52.1 Q ss_pred EEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCC---CC--------------CCCHHHHHCCCCEEEECCC Q ss_conf 999952001481346888888888878736724167722565---67--------------2344566216983997377 Q gi|254780195|r 293 KVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAET---LE--------------KEDPVKHFYGVHGILVPGG 355 (544) Q Consensus 293 ~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~---le--------------~~~~~~~L~~~dGIlVPGG 355 (544) T Consensus 3 kiGIi~~~-~-~~~a~~~a~~l~~~L~~~gi~v---~l~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~IvlGG 77 (305) T PRK02649 3 KAGIIYND-G-KPLAVRTAEELQDKLEAAGWEV---VRASSSGGMLGYANPDQPVCHTGIDALVPEGFDSSMKFAIVLGG 77 (305) T ss_pred EEEEEECC-C-CHHHHHHHHHHHHHHHHCCCEE---EEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC T ss_conf 89999738-9-9899999999999999889999---99744123228787553211244111263335777339999837 Q ss_pred CCCCCCHHHHHHHHHHHCCCCCHHHHHHH Q ss_conf 78655016888998874047632235576 Q gi|254780195|r 356 FGKRGSEGKIAAIKFARENKIPFLGICFG 384 (544) Q Consensus 356 FG~RGieGkI~Ai~yARen~iP~LGIClG 384 (544) T Consensus 78 DGT-----~L~aar~~~~~~iPilGIN~G 101 (305) T PRK02649 78 DGT-----VLSAARQTAPCGIPLLTINTG 101 (305) T ss_pred CHH-----HHHHHHHHCCCCCCEEEEECC T ss_conf 699-----999999853369978989448 |
|
| >PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.24 Score=30.29 Aligned_cols=87 Identities=24% Similarity=0.296 Sum_probs=52.7 Q ss_pred CEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC------------CHHHHHCCCCEEEECCCCCC Q ss_conf 379999520014813468888888888787367241677225656723------------44566216983997377786 Q gi|254780195|r 291 EVKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKE------------DPVKHFYGVHGILVPGGFGK 358 (544) Q Consensus 291 ~V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~------------~~~~~L~~~dGIlVPGGFG~ 358 (544) T Consensus 4 ~R~V~IV~k~-~~~~a~~~a~~l~~~L-~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~lGGDGT 81 (303) T PRK03372 4 ERTVLLVAHT-GRDEATESARRVVKQL-GDAGIGVRVLAAEAADLPDDMRALGVEIEVVDADPDAADGCELVLVLGGDGT 81 (303) T ss_pred CCEEEEEECC-CCHHHHHHHHHHHHHH-HHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHH T ss_conf 8889999708-9989999999999999-9788989997040100244455556542234532233578558999778789 Q ss_pred CCCHHHHHHHHHHHCCCCCHHHHHHH Q ss_conf 55016888998874047632235576 Q gi|254780195|r 359 RGSEGKIAAIKFARENKIPFLGICFG 384 (544) Q Consensus 359 RGieGkI~Ai~yARen~iP~LGIClG 384 (544) T Consensus 82 -----~L~aar~~~~~~iPilGiN~G 102 (303) T PRK03372 82 -----FLRAAELARNADVPVLGVNLG 102 (303) T ss_pred -----HHHHHHHHCCCCCCEEEEECC T ss_conf -----999999844479988987259 |
|
| >PRK02155 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.27 Score=29.95 Aligned_cols=86 Identities=22% Similarity=0.188 Sum_probs=49.4 Q ss_pred EEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC-----CCCCHHHHHCCCCEEEECCCCCCCCCHHHHH Q ss_conf 79999520014813468888888888787367241677225656-----7234456621698399737778655016888 Q gi|254780195|r 292 VKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETL-----EKEDPVKHFYGVHGILVPGGFGKRGSEGKIA 366 (544) Q Consensus 292 V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~l-----e~~~~~~~L~~~dGIlVPGGFG~RGieGkI~ 366 (544) T Consensus 6 k~Vgiv~k~~-~~~~~-~~~~~l~~~L~~~g~~v~~e~~~a~~~~~~~~~~~~~~~~~~~~Dlvi~lGGDGT-----lL~ 78 (291) T PRK02155 6 RTVALVGRYQ-TPGIA-EPLEALAACIAKRGFEVVFEADTARNTGLTGYPALTPAEIGARADVAVVLGGDGT-----MLG 78 (291) T ss_pred CEEEEEECCC-CHHHH-HHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCHHHHCCCCCEEEEECCCHH-----HHH T ss_conf 8999991489-86899-9999999999978899999555777639988774797994637678999767889-----999 Q ss_pred HHHHHHCCCCCHHHHHHH Q ss_conf 998874047632235576 Q gi|254780195|r 367 AIKFARENKIPFLGICFG 384 (544) Q Consensus 367 Ai~yARen~iP~LGIClG 384 (544) T Consensus 79 ~a~~~~~~~~PilGiN~G 96 (291) T PRK02155 79 IGRQLAPYGTPLIGINHG 96 (291) T ss_pred HHHHHHCCCCCEEEEECC T ss_conf 999871159968998547 |
|
| >cd03137 GATase1_AraC_1 AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain | Back alignment and domain information |
|---|
Probab=92.43 E-value=0.7 Score=26.96 Aligned_cols=83 Identities=14% Similarity=0.224 Sum_probs=54.8 Q ss_pred HHHHHHHHHHHHHHHHCCCC-CEEEEC--CCCCCC--------CCHHHHHCCCCEEEECCCCCCCC---CHHHHHHHHHH Q ss_conf 46888888888878736724-167722--565672--------34456621698399737778655---01688899887 Q gi|254780195|r 306 AYRSLIEALRHSGVSNYTKV-QLSWID--AETLEK--------EDPVKHFYGVHGILVPGGFGKRG---SEGKIAAIKFA 371 (544) Q Consensus 306 aY~Si~EAL~hA~~~~~~kv-~i~wId--se~le~--------~~~~~~L~~~dGIlVPGGFG~RG---ieGkI~Ai~yA 371 (544) T Consensus 13 ~~~~~~evl~~An~~~~~~~~~~~~vs~~g~~V~ss~G~~i~~d~~~~~~~~~D~livpgg~~~~~~~~~~~l~~~L~~~ 92 (187) T cd03137 13 DLSGPAEVFGEANRALGPPAYELRVCSPEGGPVRSSSGLSLVADAGLDALAAADTVIVPGGPDVDGRPPPPALLAALRRA 92 (187) T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCEEECCCCHHHCCCCCEEEECCCCCHHHCCCCHHHHHHHHHH T ss_conf 99999999999898559998799999569991584799789537653345646999988988611025999999999999 Q ss_pred HCCCCCHHHHHHHHHHH Q ss_conf 40476322355769999 Q gi|254780195|r 372 RENKIPFLGICFGMQMA 388 (544) Q Consensus 372 Ren~iP~LGIClGmQ~a 388 (544) T Consensus 93 ~~~~~~l~~ictG~~~L 109 (187) T cd03137 93 AARGARVASVCTGAFVL 109 (187) T ss_pred HHCCCEEEEECCCCHHH T ss_conf 75386688753140988 |
A subgroup of AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain. AraC regulators are defined by a AraC-type helix-turn-helix DNA binding domain at their C-terminal. AraC family transcriptional regulators are widespread among bacteria and are involved in regulating diverse and important biological functions, including carbon metabolism, stress responses and virulence in different microorganisms. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with typical GATase1domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. |
| >PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=92.18 E-value=0.4 Score=28.75 Aligned_cols=85 Identities=24% Similarity=0.237 Sum_probs=41.9 Q ss_pred EEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC---CCHHHHH-CCCCEEEECCCCCCCCCHHHHHH Q ss_conf 7999952001481346888888888878736724167722565672---3445662-16983997377786550168889 Q gi|254780195|r 292 VKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEK---EDPVKHF-YGVHGILVPGGFGKRGSEGKIAA 367 (544) Q Consensus 292 V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~---~~~~~~L-~~~dGIlVPGGFG~RGieGkI~A 367 (544) T Consensus 1 MKigIv~n~-~k~~a~-~~a~~l~~~L~~~g~~v~ld~~~~~~~~~~~~~~~~~~~~~~~Dlvi~lGGDGT-----~L~a 73 (278) T PRK03708 1 MRFGIVARR-DKEEAL-KLAYRVYDFLKVSGYEVVVDSDTYEHLPQFSEEDVLPLEEFDVDFILAIGGDGT-----ILRI 73 (278) T ss_pred CEEEEEEEC-CCHHHH-HHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHH-----HHHH T ss_conf 999999218-998999-999999999998899899974786566655556767543578789999878689-----9999 Q ss_pred HHHHHCCCCCHHHHHHH Q ss_conf 98874047632235576 Q gi|254780195|r 368 IKFARENKIPFLGICFG 384 (544) Q Consensus 368 i~yARen~iP~LGIClG 384 (544) T Consensus 74 ~~~~-~~~iPilGiN~G 89 (278) T PRK03708 74 EHKT-KKEIPILSINMG 89 (278) T ss_pred HHHC-CCCCCEEEEECC T ss_conf 9964-789988988358 |
|
| >PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=90.77 E-value=0.78 Score=26.64 Aligned_cols=80 Identities=20% Similarity=0.119 Sum_probs=47.9 Q ss_pred EEEEEHHHCC--CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC----HHHHHCCCCEEEECCCCCCCCCHHHHH Q ss_conf 9999520014--8134688888888887873672416772256567234----456621698399737778655016888 Q gi|254780195|r 293 KVAIVGKYIH--LKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKED----PVKHFYGVHGILVPGGFGKRGSEGKIA 366 (544) Q Consensus 293 ~IaiVGKY~~--l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~----~~~~L~~~dGIlVPGGFG~RGieGkI~ 366 (544) T Consensus 5 ~VlIV~k~~~~~A~~~a~~l~~~L~------~rGi~v~~~~~-~~~~~~~~~~~~~~~~~~Dlvi~lGGDGT-----~L~ 72 (304) T PRK02645 5 LVIIAYKAGSPQAKEAAERCAKQLE------ARGIKVLMGPS-GPKDNPYPVFLASAEELPDLAIVLGGDGT-----VLA 72 (304) T ss_pred EEEEEECCCCHHHHHHHHHHHHHHH------HCCCEEEECCC-CCCCCCCCCCCCCCCCCCCEEEEECCCHH-----HHH T ss_conf 9999985899999999999999999------88899998444-34447776200144668889999786889-----999 Q ss_pred HHHHHHCCCCCHHHHHH-H Q ss_conf 99887404763223557-6 Q gi|254780195|r 367 AIKFARENKIPFLGICF-G 384 (544) Q Consensus 367 Ai~yARen~iP~LGICl-G 384 (544) T Consensus 73 aar~~~~~~iPilGiN~~G 91 (304) T PRK02645 73 AARHLAPHDIPILSFNVGG 91 (304) T ss_pred HHHHHCCCCCCEEEEECCC T ss_conf 9998542699889982486 |
|
| >cd03139 GATase1_PfpI_2 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus | Back alignment and domain information |
|---|
Probab=90.61 E-value=1.1 Score=25.44 Aligned_cols=82 Identities=13% Similarity=0.161 Sum_probs=49.5 Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEECCCC--CC--------CCCHHHHHCCCCEEEECCCCCCCCC---HHHHHHHHHHH Q ss_conf 46888888888878736724167722565--67--------2344566216983997377786550---16888998874 Q gi|254780195|r 306 AYRSLIEALRHSGVSNYTKVQLSWIDAET--LE--------KEDPVKHFYGVHGILVPGGFGKRGS---EGKIAAIKFAR 372 (544) Q Consensus 306 aY~Si~EAL~hA~~~~~~kv~i~wIdse~--le--------~~~~~~~L~~~dGIlVPGGFG~RGi---eGkI~Ai~yAR 372 (544) T Consensus 13 ~~~~~~evl~~a~~-~~~~~~v~~vs~~~~~v~ss~G~~v~~d~~~~~~~~~D~lvvpGg~~~~~~~~~~~l~~~Lr~~~ 91 (183) T cd03139 13 DVIGPYEVFGRAPR-LAAPFEVFLVSETGGPVSSRSGLTVLPDTSFADPPDLDVLLVPGGGGTRALVNDPALLDFIRRQA 91 (183) T ss_pred HHHHHHHHHHHHHH-CCCCEEEEEEECCCCCEEECCCCEEECCCCHHHCCCCCEEEECCCCCHHHHCCCHHHHHHHHHHH T ss_conf 99999999983344-38986999997699907867980896058844667589999879987453048989999999987 Q ss_pred CCCCCHHHHHHHHHHH Q ss_conf 0476322355769999 Q gi|254780195|r 373 ENKIPFLGICFGMQMA 388 (544) Q Consensus 373 en~iP~LGIClGmQ~a 388 (544) T Consensus 92 ~~g~~i~siCtGa~~L 107 (183) T cd03139 92 ARAKYVTSVCTGALLL 107 (183) T ss_pred HCCCEEEEECHHHHHH T ss_conf 6198389873767999 |
Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. |
| >PRK00784 cobyric acid synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.7e-09 Score=87.58 Aligned_cols=329 Identities=20% Similarity=0.241 Sum_probs=172.0 Q ss_pred CCEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC------- Q ss_conf 9239999375014444489999999999968982889854455334888888644350787279840025564------- Q gi|254780195|r 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFG------- 73 (544) Q Consensus 1 m~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG------- 73 (544) T Consensus 2 ~~k~lMv~G-T~S~vGKS~l~aaLCRi~~~~G~~VaPFK--------aQNMslN----s~vt~dG~EigrAQ~~QA~Aag 68 (492) T PRK00784 2 MAKALMVQG-TTSDAGKSTLVAGLCRILARRGLRVAPFK--------AQNMSLN----SAVTADGGEIGRAQALQAEAAG 68 (492) T ss_pred CCCEEEEEE-CCCCCCHHHHHHHHHHHHHHCCCCCCCCC--------HHHCCCC----CEECCCCCEEHHHHHHHHHHCC T ss_conf 863058886-78887799999999999995898557857--------0224665----1788999833699999999869 Q ss_pred --CHHHHCCCCCCCCCCCC-----HHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCC-- Q ss_conf --11332287477546801-----258999999888577757740256460248989999707889878999724312-- Q gi|254780195|r 74 --HYERFMGISTAKADNIT-----AGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGNEDADFVICEIGGTI-- 144 (544) Q Consensus 74 --~YERFl~~~l~~~~niT-----~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~~~~Dv~ivEiGGTV-- 144 (544) T Consensus 69 ~~p~v~MNPILLKP~gd~~SQVIv~Gk~~g~~~a~~Y~--------~~~~~~~~~v~~a~~~L~~~~d~iV~EGAGSpaE 140 (492) T PRK00784 69 VEPSVDMNPVLLKPQSDTGSQVIVQGKVVGNMDARDYH--------DYKPRLLEAVLESLDRLAAEYDLVVVEGAGSPAE 140 (492) T ss_pred CCCCCCCCCEEECCCCCCCCEEEECCEECCCCCHHHHH--------HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC T ss_conf 99976768877631899886799999787531399999--------8699999999999999886588999935898200 Q ss_pred -----CCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCHHHH-H-HHHHHHHHHCCCCCCEEE--EECCC Q ss_conf -----22123068999999998749776857999974675422566200347-8-999999997499876899--92387 Q gi|254780195|r 145 -----GDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPYIRSSGELKTKP-T-QHSVKELQALGVHPDILL--IRADR 215 (544) Q Consensus 145 -----GDIEs~pFlEAiRQl~~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKP-T-QhSVk~Lrs~GIqPDiiv--cRse~ 215 (544) T Consensus 141 iNL~~~Di~Nm~~A~~~-------~---apviL-----V~DIdRGGvfAsl~GT~~lL~~~eR~l--i~G~IiNKFRGD~ 203 (492) T PRK00784 141 INLRDRDIANMGFAEAA-------D---APVIL-----VADIDRGGVFASLVGTLALLSPEERAR--VKGFVINKFRGDI 203 (492) T ss_pred CCCCHHHHHHHHHHHHC-------C---CCEEE-----EEECCCCCHHHHHHHHHHHCCHHHHHH--EEEEEEEEECCCH T ss_conf 26522002428999865-------9---98899-----997567642687763887599988711--5899997645874 Q ss_pred CCCHHHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEE Q ss_conf 58999999998641988677240389862026689887649488999983878888620478999998741843437999 Q gi|254780195|r 216 DIPEMERRKISLFCNVPMSAVIPALDVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVA 295 (544) Q Consensus 216 ~l~~~~k~KIalfc~V~~~~Vi~~~Dv~sIY~VPl~l~~q~l~~~I~~~L~l~~~~~~~l~~W~~~~~~~~~~~~~V~Ia 295 (544) T Consensus 204 ~ll~pG~~~le~~tg~PvlGviP~~~----------------------~l~l~~EDs~~l~~~----~~~~~~~~~l~Ia 257 (492) T PRK00784 204 SLLEPGLDWLEELTGIPVLGVLPYLD----------------------DLRLPAEDSLDLLLE----RAAGKGAGRLRVA 257 (492) T ss_pred HHHCCHHHHHHHHHCCCCEEEECCCC----------------------CCCCCCCCCCCCCCC----CCCCCCCCCEEEE T ss_conf 66355999999986898068614656----------------------799881015754344----5567777735899 Q ss_pred EEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC---------CCCCCCHHHHH Q ss_conf 952001481346888888888878736724167722565672344566216983997377---------78655016888 Q gi|254780195|r 296 IVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG---------FGKRGSEGKIA 366 (544) Q Consensus 296 iVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG---------FG~RGieGkI~ 366 (544) T Consensus 258 Vi-~l---P--~iSN--ftDfdpL~~e~~V~l~~v~~~--------~~l~~~D~vIlPGsK~Ti~DL~~Lr~~Gl~~~-- 319 (492) T PRK00784 258 VP-RL---P--RISN--FTDFDPLRAEPGVDVRYVRPG--------EPLPDADLVILPGSKNTIADLAWLRESGWDEA-- 319 (492) T ss_pred EE-EC---C--CCCC--CCCCHHHHHCCCEEEEEECCC--------CCCCCCCEEEECCCCCCHHHHHHHHHCCHHHH-- T ss_conf 98-06---7--5568--654435640787289997897--------65689999997998664899999998694999-- Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCC Q ss_conf 99887404763223557699999999875168899970003566664121150 Q gi|254780195|r 367 AIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMS 419 (544) Q Consensus 367 Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~ 419 (544) T Consensus 320 -i~~~~~~G~~V~GICGGyQML-------G~~I~DP~gvE~~~~~~~GLGLLp 364 (492) T PRK00784 320 -IRAHARRGGPVLGICGGYQML-------GRTIADPDGVEGAPGEVEGLGLLD 364 (492) T ss_pred -HHHHHHCCCCEEEECCHHHHH-------CCEECCCCCCCCCCCCCCCCCCEE T ss_conf -999997599789987028863-------020038656667877546523134 |
|
| >pfam07685 GATase_3 CobB/CobQ-like glutamine amidotransferase domain | Back alignment and domain information |
|---|
Probab=97.90 E-value=7.5e-06 Score=62.81 Aligned_cols=71 Identities=24% Similarity=0.253 Sum_probs=50.1 Q ss_pred HHCCCCEEEECCCCCCCCC------HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEE Q ss_conf 6216983997377786550------1688899887404763223557699999999875168899970003566664121 Q gi|254780195|r 343 HFYGVHGILVPGGFGKRGS------EGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIA 416 (544) Q Consensus 343 ~L~~~dGIlVPGGFG~RGi------eGkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~ 416 (544) T Consensus 4 ~p~~~D~lilpGg~~~~~~~~~~~~~~~~~~i~~~~~~G~pi~giCGG~q~Lg----~~---i~D~~~~~~~g~~~~glG 76 (158) T pfam07685 4 LPGDADLVILPGGKPTIQDLALLRNSGLDEALREHAEAGGPILGICGGYQMLG----ET---IIDGIEGTAGGERVEGLG 76 (158) T ss_pred CCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECHHHHHHH----HH---HCCCCCCCCCCCCCCCCC T ss_conf 99998799989954099999998775579999999977996999875889876----55---005655657776032014 Q ss_pred CCCH Q ss_conf 1501 Q gi|254780195|r 417 LMSE 420 (544) Q Consensus 417 ~l~e 420 (544) T Consensus 77 llp~ 80 (158) T pfam07685 77 LLDI 80 (158) T ss_pred CCCE T ss_conf 4306 |
|
| >PRK13896 cobyrinic acid a,c-diamide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0053 Score=42.26 Aligned_cols=132 Identities=14% Similarity=0.236 Sum_probs=79.4 Q ss_pred CCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCC-----H Q ss_conf 43437999952001481346888888888878736724167722565672344566216983997377786550-----1 Q gi|254780195|r 288 LKNEVKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGS-----E 362 (544) Q Consensus 288 ~~~~V~IaiVGKY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGi-----e 362 (544) T Consensus 229 ~~~~~rIavA~D-~AF~FyY~dnl~~L~~~a-------elv~FSPl~--D----~~LP~~dglylgGGyPEl~a~~Ls~n 294 (432) T PRK13896 229 PDTDQTVAVADD-SAFCFRYPATRERLRERA-------DVVTFSPVA--G----DPLPDCDGVYLPGGYPELHGEALADG 294 (432) T ss_pred CCCCCEEEEEEC-CCCCCCCHHHHHHHHHCC-------CEEEECCCC--C----CCCCCCCEEEECCCCCHHHHHHHHCC T ss_conf 888976999975-862701789999998478-------889876635--7----98998898984799803789998608 Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEE Q ss_conf 68889988740476322355769999999987516889997000356666412115011234653001565546740231 Q gi|254780195|r 363 GKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRL 442 (544) Q Consensus 363 GkI~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRL 442 (544) T Consensus 295 ~~l~si~~~a~~G~PiyAECGGlMyL----~~---~l~~~-----~g~~~~M~Gvlp~~~~m-----------~~r~~~l 351 (432) T PRK13896 295 PALDELGARAADGLPVLGECGGLMAL----AE---SLTTT-----DGDTYEMAGVLPADVRM-----------QDRYQAL 351 (432) T ss_pred HHHHHHHHHHHCCCCEEEECCCHHHH----HH---HHCCC-----CCCEEEEEEEECEEEEE-----------CCCCCCC T ss_conf 78999999998699789987308998----43---51657-----99887725135428897-----------7785544 Q ss_pred CCEEEEECCCCHHH Q ss_conf 65257855870668 Q gi|254780195|r 443 GAYDVSLKEETLIS 456 (544) Q Consensus 443 G~~~~~l~~~S~~~ 456 (544) T Consensus 352 GY~~~~~~~~~~~~ 365 (432) T PRK13896 352 DHVELRATGDTLTA 365 (432) T ss_pred CCEEEEECCCCCCC T ss_conf 75599963786246 |
|
| >cd01750 GATase1_CobQ Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ) | Back alignment and domain information |
|---|
Probab=97.70 E-value=3.9e-05 Score=57.61 Aligned_cols=62 Identities=26% Similarity=0.364 Sum_probs=43.7 Q ss_pred HHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCC------CHHHHHHHHHHHCCCCCHHHHHHHHHHH Q ss_conf 873672416772256567234456621698399737778655------0168889988740476322355769999 Q gi|254780195|r 319 VSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG------SEGKIAAIKFARENKIPFLGICFGMQMA 388 (544) Q Consensus 319 ~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RG------ieGkI~Ai~yARen~iP~LGIClGmQ~a 388 (544) T Consensus 18 l~~~~~v~v~~v~~~~--------~l~~~D~iIlPGsK~t~~DL~~l~~~Gl~~~i~~~~~~g~~vlgICGGyQmL 85 (194) T cd01750 18 LAREPGVDVRYVEVPE--------GLGDADLIILPGSKDTIQDLAWLRKRGLAEAIKNYARAGGPVLGICGGYQML 85 (194) T ss_pred HHCCCCCEEEEECCCC--------CCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECHHHHHH T ss_conf 6006993899967977--------6466999998998838999999987497999999997599789973656730 |
Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ). CobQ plays a role in cobalamin biosythesis. CobQ catalyses amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide in the biosynthesis of cobalamin. CobQ belongs to the triad family of amidotransferases. Two of the three residues of the catalytic triad that are involved in glutamine binding, hydrolysis and transfer of the resulting ammonia to the acceptor substrate in other triad aminodotransferases are conserved in CobQ. |
| >pfam01965 DJ-1_PfpI DJ-1/PfpI family | Back alignment and domain information |
|---|
Probab=92.56 E-value=0.091 Score=33.36 Aligned_cols=45 Identities=22% Similarity=0.372 Sum_probs=35.1 Q ss_pred HCCCCEEEECCCCCCC----CCHHHHHHHHHHHCCCCCHHHHHHHHHHH Q ss_conf 2169839973777865----50168889988740476322355769999 Q gi|254780195|r 344 FYGVHGILVPGGFGKR----GSEGKIAAIKFARENKIPFLGICFGMQMA 388 (544) Q Consensus 344 L~~~dGIlVPGGFG~R----GieGkI~Ai~yARen~iP~LGIClGmQ~a 388 (544) T Consensus 32 ~~~~D~lvipGG~~~~~~l~~~~~~~~~l~~~~~~~~~i~aiC~g~~~L 80 (141) T pfam01965 32 ADDYDALVIPGGHAAAEDLRDDEKLVKFVKEFYEAGKPIAAICHGPVLL 80 (141) T ss_pred HHHCCEEEECCCCCHHHHHHHCHHHHHHHHHHHHHCCEEEEECHHHHHH T ss_conf 5249999996994067664019999999999998399899987668999 |
The family includes the protease PfpI. This domain is also found in transcriptional regulators. |
| >cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS) | Back alignment and domain information |
|---|
Probab=92.47 E-value=0.35 Score=29.13 Aligned_cols=47 Identities=19% Similarity=0.268 Sum_probs=38.6 Q ss_pred HCCCCEEEECCC------CCC-CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH Q ss_conf 216983997377------786-55016888998874047632235576999999 Q gi|254780195|r 344 FYGVHGILVPGG------FGK-RGSEGKIAAIKFARENKIPFLGICFGMQMAVI 390 (544) Q Consensus 344 L~~~dGIlVPGG------FG~-RGieGkI~Ai~yARen~iP~LGIClGmQ~avI 390 (544) T Consensus 60 ~~~~DglIITGAPve~l~fe~v~YW~El~~i~dwa~~~v~stl~iCWaA~Aal~ 113 (175) T cd03131 60 DAKFDGLIVTGAPVEHLPFEQVDYWEELTEILDWAKTHVTSTLFSCWAAMAALY 113 (175) T ss_pred HCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHH T ss_conf 177766897189988788343877999999999998736633456499999999 |
Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti |
| >cd03135 GATase1_DJ-1 Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1 | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.14 Score=31.91 Aligned_cols=45 Identities=20% Similarity=0.307 Sum_probs=37.1 Q ss_pred HCCCCEEEECCCCC-CC---CCHHHHHHHHHHHCCCCCHHHHHHHHHHH Q ss_conf 21698399737778-65---50168889988740476322355769999 Q gi|254780195|r 344 FYGVHGILVPGGFG-KR---GSEGKIAAIKFARENKIPFLGICFGMQMA 388 (544) Q Consensus 344 L~~~dGIlVPGGFG-~R---GieGkI~Ai~yARen~iP~LGIClGmQ~a 388 (544) T Consensus 58 ~~~~D~liipGG~~~~~~l~~~~~~~~~i~~~~~~~k~i~aiC~G~~~L 106 (163) T cd03135 58 LDDYDAIVIPGGLPGAQNLADNEKLIKLLKEFNAKGKLIAAICAAPAVL 106 (163) T ss_pred CCCCCEEEECCCCCHHHHHHHCHHHHHHHHHHHHHCCEEEEECHHHHHH T ss_conf 2017989986898217677669999999999998299479864548999 |
Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1. DJ-1 is involved in multiple physiological processes including cancer, Parkinson's disease and male fertility. It is unclear how DJ-1 functions in these. DJ-1 has been shown to possess chaperone activity. DJ-1 is preferentially expressed in the testis and moderately in other tissues; it is induced together with genes involved in oxidative stress response. The Drosophila homologue (DJ-1A) plays an essential role in oxidative stress response and neuronal maintenance. Inhibition of DJ-1A function through RNAi, results in the cellular accumulation of reactive oxygen species, organismal hypersensitivity to oxidative stress, and dysfunction and degeneration of dopaminergic and photoreceptor neurons. DJ-1 has lacks enzymatic activity and the catalytic triad of typical GATase1 domains, however it does contain the highly |
| >cd03134 GATase1_PfpI_like A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.19 Score=30.96 Aligned_cols=45 Identities=20% Similarity=0.352 Sum_probs=35.3 Q ss_pred HCCCCEEEECCCCCCCC---CHHHHHHHHHHHCCCCCHHHHHHHHHHH Q ss_conf 21698399737778655---0168889988740476322355769999 Q gi|254780195|r 344 FYGVHGILVPGGFGKRG---SEGKIAAIKFARENKIPFLGICFGMQMA 388 (544) Q Consensus 344 L~~~dGIlVPGGFG~RG---ieGkI~Ai~yARen~iP~LGIClGmQ~a 388 (544) T Consensus 60 ~~~yD~ivlPGG~g~~~l~~~~~~~~~i~~~~~~~k~iaaIC~gp~~L 107 (165) T cd03134 60 ADDYDALVIPGGTNPDKLRRDPDAVAFVRAFAEAGKPVAAICHGPWVL 107 (165) T ss_pred HHHCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHCCCEEEECCHHHHH T ss_conf 622888997898588888529899999999997199299998757877 |
A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704. |
| >COG0693 ThiJ Putative intracellular protease/amidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.64 E-value=0.25 Score=30.13 Aligned_cols=45 Identities=22% Similarity=0.365 Sum_probs=38.9 Q ss_pred HCCCCEEEECCC-CCCCCC---HHHHHHHHHHHCCCCCHHHHHHHHHHH Q ss_conf 216983997377-786550---168889988740476322355769999 Q gi|254780195|r 344 FYGVHGILVPGG-FGKRGS---EGKIAAIKFARENKIPFLGICFGMQMA 388 (544) Q Consensus 344 L~~~dGIlVPGG-FG~RGi---eGkI~Ai~yARen~iP~LGIClGmQ~a 388 (544) T Consensus 64 ~~~ydal~ipGG~~~~~~~~~~~~~~~~v~~~~~~~k~vaaIC~g~~~L 112 (188) T COG0693 64 AADYDALVIPGGDHGPEYLRPDPDLLAFVRDFYANGKPVAAICHGPAVL 112 (188) T ss_pred CCCCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHCCCEEEEECCHHHHH T ss_conf 1359899988997523221351789999999997699899984688998 |
|
| >PRK00090 bioD dithiobiotin synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0016 Score=45.91 Aligned_cols=192 Identities=19% Similarity=0.243 Sum_probs=105.7 Q ss_pred EEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCC Q ss_conf 99937501444448999999999996898288985445533488888864435078727984002556411332287477 Q gi|254780195|r 5 IFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMGISTA 84 (544) Q Consensus 5 I~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~~~l~ 84 (544) T Consensus 2 ifI~G-T~T~vGKT~vt~~L~~~l~~~G~~v~~~K-------------Pv~tG~-----~~~~~~~Da~~~~~~~~~~~~ 62 (223) T PRK00090 2 LFVTG-TDTGVGKTVVTAALAQALREQGYRVAGYK-------------PVQSGC-----DGGLRNGDALALQRLSGLPLD 62 (223) T ss_pred EEEEE-CCCCCCHHHHHHHHHHHHHHCCCCEEEEC-------------EEEECC-----CCCCCCHHHHHHHHHHCCCCC T ss_conf 89986-89997699999999999997899489975-------------120489-----889972799999998089998 Q ss_pred CCC--CCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEECCCC--CCCCCCCHHHHHHHHHH Q ss_conf 546--80125899999988857775774025646024898999970788987899972431--22212306899999999 Q gi|254780195|r 85 KAD--NITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGNEDADFVICEIGGT--IGDIEVMPFVEAIRQFG 160 (544) Q Consensus 85 ~~~--niT~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~~~~Dv~ivEiGGT--VGDIEs~pFlEAiRQl~ 160 (544) T Consensus 63 ~~~~~p~~~~~p~sP~~aa~~~g----~~i~-----~~~i~~~~~~l~~~~d~vlvEGaGGl~~Pl~~~~~~~Dla~~l- 132 (223) T PRK00090 63 YELVNPYRFEEPLSPHLAARLEG----VTID-----LEKISAALRELAQQADLVLVEGAGGLLVPLTDDLTLADLAAQL- 132 (223) T ss_pred HHHHCCCCCCCCCCHHHHHHHHC----CCCC-----HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHH- T ss_conf 67605402588989899999909----8468-----9999999999983189899946886556756787889999996- Q ss_pred HHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC-EEEEEC--CCCCCHHHHHHHHHHCCCCHHHEE Q ss_conf 87497768579999746754225662003478999999997499876-899923--875899999999864198867724 Q gi|254780195|r 161 NEFSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHPD-ILLIRA--DRDIPEMERRKISLFCNVPMSAVI 237 (544) Q Consensus 161 ~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPD-iivcRs--e~~l~~~~k~KIalfc~V~~~~Vi 237 (544) T Consensus 133 ---~~---pvILV--~~-~~lG~in-----htllt~eal~~~gl~v~GvI~N~~~~~~~~~~~~~~~l~~~~gvPvLG~i 198 (223) T PRK00090 133 ---QL---PVILV--VG-VKLGCIN-----HTLLTLEAIRARGLPLAGWVANGVPPEGLRHAENLATLAELLPAPLLGRL 198 (223) T ss_pred ---CC---CEEEE--EC-CCCCHHH-----HHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEC T ss_conf ---88---98999--76-9888099-----99998999996899489999968588366777689999985499889975 Q ss_pred EC Q ss_conf 03 Q gi|254780195|r 238 PA 239 (544) Q Consensus 238 ~~ 239 (544) T Consensus 199 P~ 200 (223) T PRK00090 199 PY 200 (223) T ss_pred CC T ss_conf 89 |
|
| >pfam01656 CbiA CobQ/CobB/MinD/ParA nucleotide binding domain | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.081 Score=33.70 Aligned_cols=177 Identities=18% Similarity=0.177 Sum_probs=90.6 Q ss_pred ECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCH Q ss_conf 14444489999999999968982889854455334888888644350787279840025564113322874775468012 Q gi|254780195|r 12 VSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMGISTAKADNITA 91 (544) Q Consensus 12 ~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~~~l~~~~niT~ 91 (544) T Consensus 7 KGGVGKTT~a~nLA~~la~~G~rVlliD~D~q~~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~---- 76 (212) T pfam01656 7 KGGVGKTTLAANLARALAKRGYRVLLIDLDPQANLTSSLGKGPDLIDVLKEG------LEIVDAQPLQHIAAAIVP---- 76 (212) T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCC------CHHCCCCCHHHHHHEEEC---- T ss_conf 9980699999999999997899789983899996258865876434444441------010112100245642224---- Q ss_pred HHHHHHHHHHHHCCCCCCCCEEECCCH--------HHH-HHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 589999998885777577402564602--------489-89999707889878999724312221230689999999987 Q gi|254780195|r 92 GRIYKNVIDRERRGDYLGTTVQVIPHV--------TNE-IKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNE 162 (544) Q Consensus 92 Gkiy~~vi~kER~G~ylG~TVQvIPHv--------Tde-Ik~~I~~~~~~~Dv~ivEiGGTVGDIEs~pFlEAiRQl~~e 162 (544) T Consensus 77 --------------~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~D~viiD~pp~~~~~-------~~~al~~- 134 (212) T pfam01656 77 --------------SRNLDPLLLIPSNLSLANFESELILEGGEEGLIKLAYDYVIIDGAPGLGEL-------TANALVA- 134 (212) T ss_pred --------------CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHH-------HHHHHHC- T ss_conf --------------555587465335015667777779999998766604998999479975599-------9999983- Q ss_pred CCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC-CEEEEECCCC---CCHHHHHHHHHHCCCC Q ss_conf 49776857999974675422566200347899999999749987-6899923875---8999999998641988 Q gi|254780195|r 163 FSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHP-DILLIRADRD---IPEMERRKISLFCNVP 232 (544) Q Consensus 163 ~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqP-DiivcRse~~---l~~~~k~KIalfc~V~ 232 (544) T Consensus 135 -----ad~vivv~-------~p~~~sl~~~~~l~~~~~~l~~~~~gvV~N~~~~~~~~~~~~~~~~~~~~~~~~ 196 (212) T pfam01656 135 -----ADILVVPI-------EPEGVAVLGAQRLLELVERLGLKILGVVLNKVDRGDERHLDKEIEALERKTGIP 196 (212) T ss_pred -----CCEEEEEE-------CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC T ss_conf -----99899994-------897699999999999999859962299991488998366307899999997899 |
This family consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from S.typhimurium, and CobQ from R. capsulatus. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria. The family also contains dethiobiotin synthetases as well as the plasmid partitioning proteins of the MinD/ParA family. |
| >COG0132 BioD Dethiobiotin synthetase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.012 Score=39.71 Aligned_cols=181 Identities=22% Similarity=0.248 Sum_probs=119.7 Q ss_pred CCEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCC Q ss_conf 92399993750144444899999999999689828898544553348888886443507872798400255641133228 Q gi|254780195|r 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMG 80 (544) Q Consensus 1 m~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~ 80 (544) T Consensus 1 m~~~~fVtG-TDT~VGKTv~S~aL~~~l~~~g~~~~~~K-------------PVqsG~----~~~~~-~~D~~~l~~~~~ 61 (223) T COG0132 1 MMKRFFVTG-TDTGVGKTVVSAALAQALKQQGYSVAGYK-------------PVQTGS----EETAE-NSDALVLQRLSG 61 (223) T ss_pred CCCEEEEEE-CCCCCCHHHHHHHHHHHHHHCCCCEEEEC-------------CEEECC----CCCCC-CCHHHHHHHHCC T ss_conf 973699982-79996499999999999996897059877-------------522178----77899-745999998519 Q ss_pred CCCCCCCCCCHHHHHH----HHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCC--CCCCCCHHHH Q ss_conf 7477546801258999----999888577757740256460248989999707889878999724312--2212306899 Q gi|254780195|r 81 ISTAKADNITAGRIYK----NVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGNEDADFVICEIGGTI--GDIEVMPFVE 154 (544) Q Consensus 81 ~~l~~~~niT~Gkiy~----~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~~~~Dv~ivEiGGTV--GDIEs~pFlE 154 (544) T Consensus 62 ~~~~~--~~~~py~f~~P~sPhlAa~~e----g~~I~-----~~~l~~~l~~l~~~~d~vlVEGAGGl~vPl~~~~~~~D 130 (223) T COG0132 62 LDLSY--ELINPYRFKEPLSPHLAAELE----GRTID-----LEKLSQGLRQLLKKYDLVLVEGAGGLLVPLTEEYTFAD 130 (223) T ss_pred CCCCC--CCCCCEECCCCCCCHHHHHHC----CCCCC-----HHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCHHH T ss_conf 98663--354335307888847778764----89356-----99998788854054678999678733332578652999 Q ss_pred HHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH Q ss_conf 999999874977685799997467542256620034789999999974998768999238758999999998 Q gi|254780195|r 155 AIRQFGNEFSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKIS 226 (544) Q Consensus 155 AiRQl~~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPDiivcRse~~l~~~~k~KIa 226 (544) T Consensus 131 ~~~~~~l-------pvILV~~---~~LGtIN-----HtlLt~eal~~~gl~l~G~I~n~~~~~~~~~~~~~~ 187 (223) T COG0132 131 LAVQLQL-------PVILVVG---IKLGTIN-----HTLLTVEALRARGLPLAGWVANGINPELDHYAEINA 187 (223) T ss_pred HHHHCCC-------CEEEEEC---CCCCHHH-----HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH T ss_conf 9998099-------9999966---7757787-----999999999977998789997267885557888899 |
|
| >PRK12374 putative dithiobiotin synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.027 Score=37.12 Aligned_cols=193 Identities=18% Similarity=0.134 Sum_probs=99.9 Q ss_pred CCEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCC Q ss_conf 92399993750144444899999999999689828898544553348888886443507872798400255641133228 Q gi|254780195|r 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMG 80 (544) Q Consensus 1 m~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~ 80 (544) T Consensus 1 Mmk~~FITG-TDTdVGKT~vsaaL~~~l~~~G~~v~~~K--P---VasG---------~~~~~~g~~-~~Da~~l~~~~~ 64 (231) T PRK12374 1 MLKRFFITG-TDTSVGKTVVSRALLQALASQGKSVAGYK--P---VAKG---------SKETPEGLR-NKDALVLQSVST 64 (231) T ss_pred CCCCEEEEE-CCCCCCHHHHHHHHHHHHHHCCCCEEEEE--E---EECC---------CCCCCCCCC-HHHHHHHHHHHC T ss_conf 996479987-89995399999999999997899488885--6---8839---------966899872-478999998737 Q ss_pred CCCCCC--CCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCC--CCCHHHHHH Q ss_conf 747754--6801258999999888577757740256460248989999707889878999724312221--230689999 Q gi|254780195|r 81 ISTAKA--DNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGNEDADFVICEIGGTIGDI--EVMPFVEAI 156 (544) Q Consensus 81 ~~l~~~--~niT~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~~~~Dv~ivEiGGTVGDI--Es~pFlEAi 156 (544) T Consensus 65 ~~~~~~~vnP~~--------~~~~~aa~~~~~~id-----~~~i~~~~~~l~~~~d~vlVEGAGG~~vPl~~~~~~~Dl~ 131 (231) T PRK12374 65 IELPYEAVNPIA--------LSEEESSVAHSCPIN-----YTLISNGLANLTDKVDHVVVEGTGGWRSLMNDLRPLSEWV 131 (231) T ss_pred CCCCHHHCCCCC--------CCCCCCCHHHCCCCC-----HHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCCHHHHHH T ss_conf 899988719766--------886657744548578-----9999999999885579799977986213047651499999 Q ss_pred HHHHHHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEE-ECCC--CCCHHHHHHHHHHCCCCH Q ss_conf 9999874977685799997467542256620034789999999974998768999-2387--589999999986419886 Q gi|254780195|r 157 RQFGNEFSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHPDILLI-RADR--DIPEMERRKISLFCNVPM 233 (544) Q Consensus 157 RQl~~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPDiivc-Rse~--~l~~~~k~KIalfc~V~~ 233 (544) T Consensus 132 ~~l~--l-----PVILV~~---~~LG~INH-----tLLT~eal~~~gl~l~G~I~N~~~p~~~~~~e~i~~L~~~~~~P~ 196 (231) T PRK12374 132 VQEQ--L-----PVLMVVG---IQEGCINH-----ALLTAQAIANDGLPLIGWVANRINPGLAHYAEIIDVLGKKLPAPL 196 (231) T ss_pred HHCC--C-----CEEEEEC---CCCCHHHH-----HHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCE T ss_conf 9839--9-----9999988---98684889-----999999999789957999998367970467889999998559997 Q ss_pred HHEE Q ss_conf 7724 Q gi|254780195|r 234 SAVI 237 (544) Q Consensus 234 ~~Vi 237 (544) T Consensus 197 LG~i 200 (231) T PRK12374 197 IGEL 200 (231) T ss_pred EEEC T ss_conf 8868 |
|
| >pfam09140 MipZ ATPase MipZ | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.48 Score=28.13 Aligned_cols=175 Identities=16% Similarity=0.199 Sum_probs=87.3 Q ss_pred EEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC-EEEECCCCCCCCCCCCCHHHHCCCC Q ss_conf 999937501444448999999999996898288985445533488888864435-0787279840025564113322874 Q gi|254780195|r 4 YIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHG-EVFVTDDGGEADLDFGHYERFMGIS 82 (544) Q Consensus 4 yI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHG-EVfVt~DG~EtDlDlG~YERFl~~~ 82 (544) T Consensus 1 hIIaVaNqKGGvGKTTtavnLA~aLA~~G~rVllIDlDpq----q~slt~~l~nr~~~~~----~~~~~l---------~ 63 (261) T pfam09140 1 HVIVVGNEKGGSGKSTTAVHVAVALLYLGARVATIDLDLR----QRTLTRYIENRAATAE----RTGLDL---------P 63 (261) T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC----CCCHHHHHHHHHHHHH----HCCCCC---------C T ss_conf 9799971789872999999999999988997899979999----9851234430355655----138653---------4 Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 77546801258999999888577757740256460248989999707889878999724312221230689999999987 Q gi|254780195|r 83 TAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNE 162 (544) Q Consensus 83 l~~~~niT~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~~~~Dv~ivEiGGTVGDIEs~pFlEAiRQl~~e 162 (544) T Consensus 64 ~P~~~~l~~~~~--~~~~~~~~~-------------~~~L~~al~~l~~~yDfIlIDcPPsl~~Lt~nAl~aAD~vI--- 125 (261) T pfam09140 64 VPKHLCLPDDVS--EVFDGESAD-------------DARLEEAVADLEQDADFIVIDTPGSDSPLSRLAHSRADTLV--- 125 (261) T ss_pred CCCCCCCCHHHH--HHHHHHHHH-------------HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCEEE--- T ss_conf 665344550677--761345578-------------99999999998757999999699857399999999839876--- Q ss_pred CCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHH-----HHHHHH--CCCCCCEEEEECCCC Q ss_conf 497768579999746754225662003478999-----999997--499876899923875 Q gi|254780195|r 163 FSHRGSKALYIHLTLMPYIRSSGELKTKPTQHS-----VKELQA--LGVHPDILLIRADRD 216 (544) Q Consensus 163 ~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhS-----Vk~Lrs--~GIqPDiivcRse~~ 216 (544) T Consensus 126 i---Plq~sf~dld~L~~vd~~~~~i~~~s~y~e~vw~~r~~ra~~~~~~idwivlrnRl~ 183 (261) T pfam09140 126 T---PLNDSFVDFDLLGQVDPETFKVTRPSFYAEMVWEARKKRAQADRAPIDWIVLRNRLS 183 (261) T ss_pred E---CCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCH T ss_conf 3---244015514335213703432136217899999999987436898864799805621 |
MipZ is an ATPase that forms a complex with the chromosome partitioning protein ParB near the chromosomal origin of replication. It is responsible for the temporal and spatial regulation of FtsZ ring formation. |
| >COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=92.70 E-value=0.22 Score=30.61 Aligned_cols=150 Identities=23% Similarity=0.345 Sum_probs=85.6 Q ss_pred CCEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCC Q ss_conf 92399993750144444899999999999689828898544553348888886443507872798400255641133228 Q gi|254780195|r 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMG 80 (544) Q Consensus 1 m~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~ 80 (544) T Consensus 1 M~~iIVvTSGK-GGVGKTTttAnig~aLA~~GkKv~liD~DiGL--------------------------------RNLD 47 (272) T COG2894 1 MARIIVVTSGK-GGVGKTTTTANIGTALAQLGKKVVLIDFDIGL--------------------------------RNLD 47 (272) T ss_pred CCEEEEEECCC-CCCCCCCHHHHHHHHHHHCCCEEEEEECCCCC--------------------------------HHHH T ss_conf 96499994488-87674310677899999739859999667672--------------------------------0446 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH Q ss_conf 74775468012589999998885777577402564602489899997078898789997243122212306899999999 Q gi|254780195|r 81 ISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFG 160 (544) Q Consensus 81 ~~l~~~~niT~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~~~~Dv~ivEiGGTVGDIEs~pFlEAiRQl~ 160 (544) T Consensus 48 l----------------imGlE~RiVY---------d~vdVi~g~~~------------------------l~QALI--- 75 (272) T COG2894 48 L----------------IMGLENRIVY---------DLVDVIEGEAT------------------------LNQALI--- 75 (272) T ss_pred H----------------HHCCCCEEEE---------EEHHHHCCCCC------------------------HHHHHH--- T ss_conf 6----------------6434201565---------40134447663------------------------656764--- Q ss_pred HHCCCCCCCEEEEEEEEEEEECCCCC--CHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHEEE Q ss_conf 87497768579999746754225662--0034789999999974998768999238758999999998641988677240 Q gi|254780195|r 161 NEFSHRGSKALYIHLTLMPYIRSSGE--LKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIP 238 (544) Q Consensus 161 ~e~g~~~~n~~fiHvtlvP~l~~~gE--~KTKPTQhSVk~Lrs~GIqPDiivcRse~~l~~~~k~KIalfc~V~~~~Vi~ 238 (544) T Consensus 76 kD--Kr~~n-L~----lLPAsQtrdKdalt~E~v~~vv~eL~~--~~fDyIi~DsPAGIE~G~~~A~~~A---d~AiVVt 143 (272) T COG2894 76 KD--KRLEN-LF----LLPASQTRDKDALTPEGVKKVVNELKA--MDFDYIIIDSPAGIEQGFKNAVYFA---DEAIVVT 143 (272) T ss_pred CC--CCCCC-EE----ECCCCCCCCCCCCCHHHHHHHHHHHHH--CCCCEEEECCCCHHHHHHHHHHHCC---CEEEEEC T ss_conf 03--56785-26----614432367222799999999999976--6998899648406778888654102---6379974 Q ss_pred CCCCCCHHH Q ss_conf 389862026 Q gi|254780195|r 239 ALDVDDIYK 247 (544) Q Consensus 239 ~~Dv~sIY~ 247 (544) T Consensus 144 nPEvSsVRD 152 (272) T COG2894 144 NPEVSSVRD 152 (272) T ss_pred CCCCCCCCC T ss_conf 887554234 |
|
| >PRK00081 coaE dephospho-CoA kinase; Reviewed | Back alignment and domain information |
|---|
Probab=90.50 E-value=0.13 Score=32.16 Aligned_cols=171 Identities=16% Similarity=0.211 Sum_probs=100.4 Q ss_pred CCEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCC-CEEEECCCCCCCCCCCCCHHHHC Q ss_conf 92399993750144444899999999999689828898544553348888886443-50787279840025564113322 Q gi|254780195|r 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQH-GEVFVTDDGGEADLDFGHYERFM 79 (544) Q Consensus 1 m~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eH-GEVfVt~DG~EtDlDlG~YERFl 79 (544) T Consensus 1 ~m~~IgiTG~igsG--K----Stv~~~l~~~G~~vi--------daD~i~~~l~~~~~~~~~-----~------i~~~fg 55 (199) T PRK00081 1 MMLIIGLTGGIGSG--K----STVANIFAELGVPVI--------DADKIAHQVLEPGGPALE-----A------IVEHFG 55 (199) T ss_pred CCEEEEEECCCCCC--H----HHHHHHHHHCCCCEE--------EHHHHHHHHHHHCHHHHH-----H------HHHHHH T ss_conf 97899957888777--9----999999998899399--------637999999970759999-----9------999853 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHH Q ss_conf 87477546801258999999888577757740256460248989999707889878999724312221230689999999 Q gi|254780195|r 80 GISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQF 159 (544) Q Consensus 80 ~~~l~~~~niT~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~~~~Dv~ivEiGGTVGDIEs~pFlEAiRQl 159 (544) T Consensus 56 ~~i~~~~g~idr~~L~~~vF~d~~~~~~Le~ii--HP~V~~~i~~~~~~~~~~~~~iv~e~p---------LL~E~---- 120 (199) T PRK00081 56 SEILLADGELDRRKLRERVFSNPEERKWLEAIL--HPLIREEIQEQLQQAESPEKYVVLDIP---------LLFEN---- 120 (199) T ss_pred HHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHCCCCEEEEECH---------HHHHC---- T ss_conf 631377787569999999867989999999987--799999999999986469978999431---------67653---- Q ss_pred HHHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHC-CCCCCEEEEECCCCCCHHHHHHHHHH Q ss_conf 9874977685799997467542256620034789999999974-99876899923875899999999864 Q gi|254780195|r 160 GNEFSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQAL-GVHPDILLIRADRDIPEMERRKISLF 228 (544) Q Consensus 160 ~~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~-GIqPDiivcRse~~l~~~~k~KIalf 228 (544) T Consensus 121 ----~~------~~~~d~vi~V~a~~-----~~r--~~Rl~~R~~~~~~~~~~r~~~Q~~~~~k~~~aD~ 173 (199) T PRK00081 121 ----GL------YKWFDRVLVVDVPP-----EIQ--LERLMARDGLSEEEAEAILASQMSREEKLARADD 173 (199) T ss_pred ----CC------HHCCCEEEEEECCH-----HHH--HHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCE T ss_conf ----60------12078579998699-----999--9999974899899999999958998999996999 |
|
| >pfam02374 ArsA_ATPase Anion-transporting ATPase | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.028 Score=37.04 Aligned_cols=44 Identities=23% Similarity=0.366 Sum_probs=39.5 Q ss_pred CEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC Q ss_conf 2399993750144444899999999999689828898544553348 Q gi|254780195|r 2 VKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSD 47 (544) Q Consensus 2 ~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD 47 (544) T Consensus 1 mr~i~~~G--KGGVGKTT~AaA~A~~~A~~G~rvLlvStDPAhsL~ 44 (304) T pfam02374 1 MRWIFFGG--KGGVGKTTVSCATAVRLSEQGKKVLLVSTDPAHSLS 44 (304) T ss_pred CCEEEEEC--CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHH T ss_conf 91999957--985748999999999999589929999469721488 |
This Pfam family represents a conserved domain, which is sometimes repeated, in an anion-transporting ATPase. The ATPase is involved in the removal of arsenate, antimonite, and arsenate from the cell. |
| >cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.1 Score=32.94 Aligned_cols=47 Identities=28% Similarity=0.300 Sum_probs=41.9 Q ss_pred CEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCC Q ss_conf 2399993750144444899999999999689828898544553348888 Q gi|254780195|r 2 VKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGT 50 (544) Q Consensus 2 ~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~Gt 50 (544) T Consensus 1 ~r~Iai~G--KGGVGKTTtavNLA~aLa~~GkkVlliDaDpq~~~t~~l 47 (270) T cd02040 1 MRQIAIYG--KGGIGKSTTTQNLSAALAEMGKKVMIVGCDPKADSTRLL 47 (270) T ss_pred CCEEEEEC--CCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH T ss_conf 95899979--985778999999999999879949998657998513465 |
Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia. |
| >cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.096 Score=33.18 Aligned_cols=33 Identities=33% Similarity=0.381 Sum_probs=29.8 Q ss_pred EEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEE Q ss_conf 99937501444448999999999996898288985 Q gi|254780195|r 5 IFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRK 39 (544) Q Consensus 5 I~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K 39 (544) T Consensus 2 i~~~~~k--GvGKTT~a~~La~~la~~g~~Vl~vD 34 (99) T cd01983 2 IVVTGKG--GVGKTTLAANLAAALAKRGKRVLLID 34 (99) T ss_pred EEEECCC--CCCHHHHHHHHHHHHHHCCCEEEEEC T ss_conf 8985899--77689999999999998899699986 |
Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion. |
| >CHL00175 minD septum-site determining protein; Validated | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.34 Score=29.18 Aligned_cols=46 Identities=35% Similarity=0.474 Sum_probs=39.1 Q ss_pred CCEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCC-CCC Q ss_conf 92399993750144444899999999999689828898544553-348 Q gi|254780195|r 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYL-NSD 47 (544) Q Consensus 1 m~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYl-NvD 47 (544) T Consensus 12 m~kiIaV~s~-KGGVGKTT~a~NLa~aLA~~G~kVlliD~D~~~~n~~ 58 (279) T CHL00175 12 MTRIIVITSG-KGGVGKTTTTANLGMSIARLGYRVALIDADIGLRNLD 58 (279) T ss_pred CCEEEEEECC-CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC T ss_conf 8869999748-9984489999999999997899889995789999875 |
|
| >COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=93.90 E-value=0.14 Score=32.07 Aligned_cols=50 Identities=26% Similarity=0.252 Sum_probs=44.6 Q ss_pred CCEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC Q ss_conf 9239999375014444489999999999968982889854455334888888 Q gi|254780195|r 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMS 52 (544) Q Consensus 1 m~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~Gtms 52 (544) T Consensus 1 ~~riv~f~G--KGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAhsL~d~f~~ 50 (322) T COG0003 1 MTRIVFFTG--KGGVGKTTIAAATAVKLAESGKKVLLVSTDPAHSLGDVFDL 50 (322) T ss_pred CCEEEEEEC--CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCC T ss_conf 937999936--88545899999999999975990799984898744765423 |
|
| >TIGR03453 partition_RepA plasmid partitioning protein RepA | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.69 Score=27.00 Aligned_cols=32 Identities=31% Similarity=0.433 Sum_probs=18.8 Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEEEECCCCC Q ss_conf 44448999999999996898288985445533 Q gi|254780195|r 14 SLGKGVAAASLGALLQAHKYKVRVRKLDPYLN 45 (544) Q Consensus 14 glGKGi~aaSig~lLk~~g~~v~~~K~DPYlN 45 (544) T Consensus 115 GVGKTTtav~LA~~LA~~G~RVLvIDLDPQan 146 (387) T TIGR03453 115 GSGKTTTSAHLAQYLALRGYRVLAIDLDPQAS 146 (387) T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEECCCHHH T ss_conf 65699999999999997799889995370167 |
Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error. |
| >PRK13869 plasmid-partitioning protein RepA; Provisional | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.63 Score=27.28 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=21.1 Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCC Q ss_conf 444489999999999968982889854455334 Q gi|254780195|r 14 SLGKGVAAASLGALLQAHKYKVRVRKLDPYLNS 46 (544) Q Consensus 14 glGKGi~aaSig~lLk~~g~~v~~~K~DPYlNv 46 (544) T Consensus 132 GVGKTTtav~LA~~LA~~G~RVLlIDLDPQgnl 164 (405) T PRK13869 132 GSGKTTTSAHLAQYLALQGYRVLAVDLDPQASL 164 (405) T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH T ss_conf 765999999999999977998899964561788 |
|
| >PRK10818 cell division inhibitor MinD; Provisional | Back alignment and domain information |
|---|
Probab=93.14 E-value=0.59 Score=27.49 Aligned_cols=44 Identities=27% Similarity=0.350 Sum_probs=39.1 Q ss_pred CCEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCC Q ss_conf 923999937501444448999999999996898288985445533 Q gi|254780195|r 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLN 45 (544) Q Consensus 1 m~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlN 45 (544) T Consensus 1 M~rvIaV~s~-KGGVGKTT~avNLA~aLA~~G~kVlliD~D~~~~ 44 (270) T PRK10818 1 MARIIVVTSG-KGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLR 44 (270) T ss_pred CCEEEEEECC-CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC T ss_conf 9749999789-9984189999999999997799689996899998 |
|
| >cd03114 ArgK-like The function of this protein family is unkown | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.95 Score=26.00 Aligned_cols=38 Identities=34% Similarity=0.378 Sum_probs=32.0 Q ss_pred EECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCC Q ss_conf 9375014444489999999999968982889854455334 Q gi|254780195|r 7 ITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNS 46 (544) Q Consensus 7 VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNv 46 (544) T Consensus 4 itG--~pGaGKStLi~~l~~~~~~~g~~VaVlavDPsS~~ 41 (148) T cd03114 4 ITG--VPGAGKSTLIDALITALRARGKRVAVLAIDPSSPF 41 (148) T ss_pred ECC--CCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCC T ss_conf 258--99787899999999999978983799996888786 |
The protein sequences are similar to the ArgK protein in E. coli. ArgK protein is a membrane ATPase which is required for transporting arginine, ornithine and lysine into the cells by the arginine and ornithine (AO system) and lysine, arginine and ornithine (LAO) transport systems. |
| >PRK13233 nifH nitrogenase reductase; Reviewed | Back alignment and domain information |
|---|
Probab=91.03 E-value=0.52 Score=27.90 Aligned_cols=44 Identities=30% Similarity=0.409 Sum_probs=40.3 Q ss_pred CCEEEEEECCEECCCCHHHHHHHHHHHHHH-CCCEEEEEEECCCCCC Q ss_conf 923999937501444448999999999996-8982889854455334 Q gi|254780195|r 1 MVKYIFITGGVVSSLGKGVAAASLGALLQA-HKYKVRVRKLDPYLNS 46 (544) Q Consensus 1 m~KyI~VtGGV~SglGKGi~aaSig~lLk~-~g~~v~~~K~DPYlNv 46 (544) T Consensus 1 m~~~iaiyG--KGGIGKSTTt~NLaaALA~l~GkrVl~IgcDPk~dS 45 (275) T PRK13233 1 MTRKIAIYG--KGGIGKSTTTQNTAAAMAHFHDKKVFIHGCDPKADS 45 (275) T ss_pred CCCEEEEEC--CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH T ss_conf 973899989--985446545999999999647988999797887613 |
|
| >PRK06761 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=91.01 E-value=0.42 Score=28.57 Aligned_cols=35 Identities=34% Similarity=0.489 Sum_probs=33.0 Q ss_pred CCEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEE Q ss_conf 9239999375014444489999999999968982889 Q gi|254780195|r 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRV 37 (544) Q Consensus 1 m~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~ 37 (544) T Consensus 1 m~kLIiIEG--lPGsGKSTta~~l~d~L~~~g~~v~~ 35 (281) T PRK06761 1 MTKLIIIEG--LPGFGKSTTAHLLNDKLSQLKIEVEL 35 (281) T ss_pred CCCEEEEEC--CCCCCHHHHHHHHHHHHHHCCCCEEE T ss_conf 961799966--89998014999999999866985389 |
|
| >cd02035 ArsA ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.098 Score=33.11 Aligned_cols=167 Identities=20% Similarity=0.256 Sum_probs=85.5 Q ss_pred EEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC-CCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCC Q ss_conf 99993750144444899999999999689828898544553348-88888644350787279840025564113322874 Q gi|254780195|r 4 YIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSD-PGTMSPVQHGEVFVTDDGGEADLDFGHYERFMGIS 82 (544) Q Consensus 4 yI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD-~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~~~ 82 (544) T Consensus 1 i~~~sG--KGGVGKTTvAaalA~~lA~~G~rvLlvs~DPah~l~d~~~~~------L~~~~~~~~~e~~~~~~~------ 66 (217) T cd02035 1 VIFFTG--KGGVGKTTIAAATAVRLAEEGKKVLLVSTDPAHNLSDKGLPN------LSDAFIVEDPEIAPNLYR------ 66 (217) T ss_pred CEEEEC--CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC------CCCCCCCCCHHHHHHHHH------ T ss_conf 989978--996619999999999999689949999589876653234798------651358887666799998------ Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCC-------CCEEECCCHHHHHH--HHHHC--CCCCCCEEEEECCCCCCCCCCCH Q ss_conf 775468012589999998885777577-------40256460248989--99970--78898789997243122212306 Q gi|254780195|r 83 TAKADNITAGRIYKNVIDRERRGDYLG-------TTVQVIPHVTNEIK--EFITQ--GNEDADFVICEIGGTIGDIEVMP 151 (544) Q Consensus 83 l~~~~niT~Gkiy~~vi~kER~G~ylG-------~TVQvIPHvTdeIk--~~I~~--~~~~~Dv~ivEiGGTVGDIEs~p 151 (544) T Consensus 67 -------------~~v~~~~~~~~~~~~~~~~~~~~~~~~pg~-~E~~~l~~~~~~~~~~~yD~IVvDtpPT-Gh----- 126 (217) T cd02035 67 -------------EEVDATRRVERAWGGEGGLMLELAAALPGI-EELASLLAVFREFSEGLYDVIVFDTAPT-GH----- 126 (217) T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHCCCCCEEEECCCCC-HH----- T ss_conf -------------750166653331100114567776159978-9999999999998548998899828985-56----- Q ss_pred HHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC Q ss_conf 89999999987497768579999746754225662003478999999997499876899923 Q gi|254780195|r 152 FVEAIRQFGNEFSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHPDILLIRA 213 (544) Q Consensus 152 FlEAiRQl~~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPDiivcRs 213 (544) T Consensus 127 ---tlrlL~~~~L~d~~~t~~~lVt~-Pe~~~~-----~et~r~~~~L~~~gi~v~~vVvN~ 179 (217) T cd02035 127 ---TLRLLVRELLTDPERTSFRLVTL-PEKLPL-----YETERAITELALYGIPVDAVVVNR 179 (217) T ss_pred ---HHHHHHHHHHCCCCCCEEEEEEC-CCCCHH-----HHHHHHHHHHHHCCCCCCEEEEEC T ss_conf ---99986788724888767999957-762179-----999999999997799889898958 |
This ATP-driven oxyanion pump catalyzes the extrusion of arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two subunits, the catalytic ArsA subunit and the membrane subunit ArsB, which are encoded by arsA and arsB genes respectively. Arsenic efflux in bacteria is catalyzed by either ArsB alone or by ArsAB complex. The ATP-coupled pump, however, is more efficient. ArsA is composed of two homologous halves, A1 and A2, connected by a short linker sequence. |
| >cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA) | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.25 Score=30.12 Aligned_cols=187 Identities=18% Similarity=0.245 Sum_probs=95.0 Q ss_pred EEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC--EEEECC--CCCCCCCCCCCHHHH Q ss_conf 3999937501444448999999999996898288985445533488888864435--078727--984002556411332 Q gi|254780195|r 3 KYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHG--EVFVTD--DGGEADLDFGHYERF 78 (544) Q Consensus 3 KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHG--EVfVt~--DG~EtDlDlG~YERF 78 (544) T Consensus 1 r~i~~~G--KGGVGKTT~AaalA~~lA~~G~kVLlvstDPahsLsd~f~~~~~~~~~~v~~~~nL~a~eid~~~~-~~~~ 77 (254) T cd00550 1 RYIFFGG--KGGVGKTTISAATAVRLAEQGKKVLLVSTDPAHSLSDSFNQEFGKGPTPVKGVENLSAMEIDPQEA-LEEY 77 (254) T ss_pred CEEEEEC--CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCCCCCCEECCCCCCEEEEECHHHH-HHHH T ss_conf 9899968--985548999999999999689949999589864488984886678871103668845787288999-9999 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHH--HHHC--CCCCCCEEEEECCC---CCCCCCCCH Q ss_conf 2874775468012589999998885777577402564602489899--9970--78898789997243---122212306 Q gi|254780195|r 79 MGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKE--FITQ--GNEDADFVICEIGG---TIGDIEVMP 151 (544) Q Consensus 79 l~~~l~~~~niT~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~--~I~~--~~~~~Dv~ivEiGG---TVGDIEs~p 151 (544) T Consensus 78 ~~~v~~~~~~~~~~~~~~~~~~~~~----------~~PG-~~E~~~l~~i~~~~~~~~yD~IViDtaPTGhtLrlL~lP~ 146 (254) T cd00550 78 RQEVLEPIEANLLLEMLKGILEEEL----------ESPG-IEEIAAFDEFSRYIDEAEYDVVVFDTAPTGHTLRLLSLPT 146 (254) T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHH----------CCCC-HHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCHH T ss_conf 9999998863225566888899986----------3985-8999999999999760699889988998567998751569 Q ss_pred HHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC Q ss_conf 89999999987497768579999746754225662003478999999997499876899923 Q gi|254780195|r 152 FVEAIRQFGNEFSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHPDILLIRA 213 (544) Q Consensus 152 FlEAiRQl~~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPDiivcRs 213 (544) T Consensus 147 ~l~~~~~~---L~-d~~~t~~~lV~-~PE~~~v-----~Et~R~~~~L~~~~i~v~~vvvN~ 198 (254) T cd00550 147 VLSWAREI---LS-DPERTSFRLVC-IPEKMSL-----YETERAIQELAKYGIDVDAVIVNQ 198 (254) T ss_pred HHHHHHHH---CC-CCCCEEEEEEE-CCCCCHH-----HHHHHHHHHHHHCCCCCCEEEEEC T ss_conf 99999985---37-95655899997-7872169-----999999999997799989799958 |
This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity. |
| >cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily | Back alignment and domain information |
|---|
Probab=92.11 E-value=1.2 Score=25.38 Aligned_cols=121 Identities=22% Similarity=0.325 Sum_probs=74.6 Q ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCHH Q ss_conf 44444899999999999689828898544553348888886443507872798400255641133228747754680125 Q gi|254780195|r 13 SSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMGISTAKADNITAG 92 (544) Q Consensus 13 SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~~~l~~~~niT~G 92 (544) T Consensus 9 ggvgkst~~~~la~~l~~~g~~v~~~d~di~gpsi-----p~----------------------------~--------- 46 (169) T cd02037 9 GGVGKSTVAVNLALALAKLGYKVGLLDADIYGPSI-----PK----------------------------M--------- 46 (169) T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC-----CE----------------------------E--------- T ss_conf 98819999999999999879978999713799975-----50----------------------------1--------- Q ss_pred HHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCC-CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEE Q ss_conf 89999998885777577402564602489899997078-89878999724312221230689999999987497768579 Q gi|254780195|r 93 RIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGN-EDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKAL 171 (544) Q Consensus 93 kiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~-~~~Dv~ivEiGGTVGDIEs~pFlEAiRQl~~e~g~~~~n~~ 171 (544) T Consensus 47 ----------~rG----------p~~~~~i~q~l~~~~w~~lDyLIID~PPGtgD~-~lt~~----~~---~~---~d~~ 95 (169) T cd02037 47 ----------WRG----------PMKMGAIKQFLTDVDWGELDYLVIDMPPGTGDE-HLTLA----QS---LP---IDGA 95 (169) T ss_pred ----------EEC----------HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH-HHHHH----HH---CC---CCCE T ss_conf ----------204----------738999999998525466788999689998707-78798----75---05---6747 Q ss_pred EEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC-EEEEEC Q ss_conf 999746754225662003478999999997499876-899923 Q gi|254780195|r 172 YIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHPD-ILLIRA 213 (544) Q Consensus 172 fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPD-iivcRs 213 (544) T Consensus 96 IvVTT--P-----~~~s~~Da~r~i~~~~~~~i~i~GvVeNMs 131 (169) T cd02037 96 VIVTT--P-----QEVALDDVRKAIDMFKKVNIPILGVVENMS 131 (169) T ss_pred EEEEC--C-----CHHHHHHHHHHHHHHHHCCCCEEEEEECCC T ss_conf 99946--9-----588999999999999975997079998796 |
Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter. |
| >TIGR00313 cobQ cobyric acid synthase CobQ; InterPro: IPR004459 Cobyric acid synthase (CobQ) catalyses amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide in the biosynthesis of cobalamin | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.011 Score=39.98 Aligned_cols=293 Identities=22% Similarity=0.354 Sum_probs=167.5 Q ss_pred ECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCC---------CCCHHHH Q ss_conf 3750144444899999999999689828898544553348888886443507872798400255---------6411332 Q gi|254780195|r 8 TGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLD---------FGHYERF 78 (544) Q Consensus 8 tGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlD---------lG~YERF 78 (544) T Consensus 3 V~GTsS~AGKs~l~AaLCRiL~rrGy~VAPFKs--------QNMSLN----Sfvt~~~~EiA~AQ~~QA~AAGieP~~~m 70 (502) T TIGR00313 3 VVGTSSSAGKSLLTAALCRILARRGYRVAPFKS--------QNMSLN----SFVTAEGGEIAIAQALQALAAGIEPSVHM 70 (502) T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHH----HHHCCCCCEEEHHHHHHHHHCCCCCCCCC T ss_conf 420115402899999999998527881278501--------101013----33113787551376899986387886234 Q ss_pred CCCCCCCCCCCCH-----HHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC----C Q ss_conf 2874775468012-----589999998885777577402564602489899997078898789997243122212----3 Q gi|254780195|r 79 MGISTAKADNITA-----GRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGNEDADFVICEIGGTIGDIE----V 149 (544) Q Consensus 79 l~~~l~~~~niT~-----Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~~~~Dv~ivEiGGTVGDIE----s 149 (544) T Consensus 71 NPvLLKPkgdf~SQviv~G~a~g~~~~~~Y~~~~~d~-------~~~~i~eSle~L~~~Yd~vv~EGAGS~AEINL~~rD 143 (502) T TIGR00313 71 NPVLLKPKGDFTSQVIVHGRAVGDMNAQEYYKNKVDF-------LLKAIKESLEILAEEYDLVVIEGAGSPAEINLKERD 143 (502) T ss_pred CCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHH-------HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC T ss_conf 8710167888466789841124667615677799999-------999999999875202888998268871000533157 Q ss_pred CHHHHHHHHHH------HHCCCCCCCEEEEEE--EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEE--EECCCCCCH Q ss_conf 06899999999------874977685799997--46754225662003478999999997499876899--923875899 Q gi|254780195|r 150 MPFVEAIRQFG------NEFSHRGSKALYIHL--TLMPYIRSSGELKTKPTQHSVKELQALGVHPDILL--IRADRDIPE 219 (544) Q Consensus 150 ~pFlEAiRQl~------~e~g~~~~n~~fiHv--tlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPDiiv--cRse~~l~~ 219 (544) T Consensus 144 LaN~~iA~~~~A~~iLvADIDRG-G--VFAsi~GTl~LL~----~-~~r~l---iKG---------~vINkfRG~~~vL~ 203 (502) T TIGR00313 144 LANMRIAELADADVILVADIDRG-G--VFASIYGTLKLLP----E-EERKL---IKG---------IVINKFRGNVDVLE 203 (502) T ss_pred CHHHHHHHHCCCCEEEEEECCCC-C--CHHHHHHHHHHCC----C-CCCCE---ECE---------EEECCCCCCHHHHH T ss_conf 22478986439767999750777-4--3243374666188----3-45750---030---------68835468724434 Q ss_pred HHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEH- Q ss_conf 9999998641988677240389862026689887649488999983878888620478999998741843437999952- Q gi|254780195|r 220 MERRKISLFCNVPMSAVIPALDVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVG- 298 (544) Q Consensus 220 ~~k~KIalfc~V~~~~Vi~~~Dv~sIY~VPl~l~~q~l~~~I~~~L~l~~~~~~~l~~W~~~~~~~~~~~~~V~IaiVG- 298 (544) T Consensus 204 ~GI~~lEelTGiPVLGv~PY----------------------~~~l~lp~EDS~~l~~~~~~G-----~~~dirv~v~RL 256 (502) T TIGR00313 204 SGIEKLEELTGIPVLGVLPY----------------------DENLKLPEEDSLDLEERKARG-----SKKDIRVGVVRL 256 (502) T ss_pred HHHHHHHHHCCCCEEEEEEC----------------------CCCCCCCHHHHHHHHHHCCCC-----CCCCEEEEEEEC T ss_conf 45689988548423446501----------------------257767513105688615789-----975048999853 Q ss_pred -HHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHH----------H Q ss_conf -00148134688888888887873672416772256567234456621698399737778655016888----------9 Q gi|254780195|r 299 -KYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGSEGKIA----------A 367 (544) Q Consensus 299 -KY~~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGieGkI~----------A 367 (544) T Consensus 257 priSNFTD-----~ePL~-----~~~~V~v~fl~l~~--------~L~~~d~vIiP---Gsk~ti~dl~~L~~~~~~~~i 315 (502) T TIGR00313 257 PRISNFTD-----FEPLR-----YEADVAVKFLELED--------SLDGLDAVIIP---GSKDTIADLKALKESGFAEEI 315 (502) T ss_pred CCCCCCCC-----CCHHH-----CCCCCEEEEECCCC--------CCCCCEEEEEC---CCCCHHHHHHHHHHCCCHHHH T ss_conf 76356677-----52211-----14872899832688--------77884489967---996578999999746866799 Q ss_pred HHHHHCCCCC-HHHHHHHHHHHH Q ss_conf 9887404763-223557699999 Q gi|254780195|r 368 IKFARENKIP-FLGICFGMQMAV 389 (544) Q Consensus 368 i~yARen~iP-~LGIClGmQ~av 389 (544) T Consensus 316 ~~~~~--~ig~V~GICGGYQ~LG 336 (502) T TIGR00313 316 LDLAK--EIGIVIGICGGYQMLG 336 (502) T ss_pred HHHHH--CCCEEEEECCCHHHHH T ss_conf 99960--6988998347602100 |
NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolysed for each amidation .; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process. |
| >COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.013 Score=39.34 Aligned_cols=281 Identities=22% Similarity=0.309 Sum_probs=139.0 Q ss_pred EEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCC Q ss_conf 39999375014444489999999999968982889854455334888888644350787279840025564113322874 Q gi|254780195|r 3 KYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMGIS 82 (544) Q Consensus 3 KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~~~ 82 (544) T Consensus 2 ~~iMv-~GT~S~~GKS~~~aglcRi~~~~G~~V~PFK~--------QNMsL----Ns~it~~G~EI-------------- 54 (486) T COG1492 2 KAIMV-QGTTSDAGKSFLVAGLCRILARRGYRVAPFKS--------QNMSL----NSAITPGGGEI-------------- 54 (486) T ss_pred CCCEE-EECCCCCCHHHHHHHHHHHHHHCCCCCCCCHH--------HHCCC----CCEECCCCCEE-------------- T ss_conf 85378-72147765467524534888735775478706--------54346----60787799687-------------- Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCC---------CCEEECCC-------------------HHHHHHHHHHCCCCCCC Q ss_conf 775468012589999998885777577---------40256460-------------------24898999970788987 Q gi|254780195|r 83 TAKADNITAGRIYKNVIDRERRGDYLG---------TTVQVIPH-------------------VTNEIKEFITQGNEDAD 134 (544) Q Consensus 83 l~~~~niT~Gkiy~~vi~kER~G~ylG---------~TVQvIPH-------------------vTdeIk~~I~~~~~~~D 134 (544) T Consensus 55 -------graQ~~QA~Aa~i~p~v~mNPvLLKP~sd~~sQVIv~G~~~G~~s~~~yy~~~~~~l~~~v~~s~~~l~~~~d 127 (486) T COG1492 55 -------GRAQALQALAAGIEPSVHMNPVLLKPCSDTGSQVIVMGKDIGRKSAVEYYQEGKGLLWVAVKESLERLDREYD 127 (486) T ss_pred -------EHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf -------5506678987399874342877870358884479994634466571788999889999999999987541055 Q ss_pred EEEEECCCCCC-------CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEE----EECCCCCCHHHHHHHHHHHHHHCC Q ss_conf 89997243122-------2123068999999998749776857999974675----422566200347899999999749 Q gi|254780195|r 135 FVICEIGGTIG-------DIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMP----YIRSSGELKTKPTQHSVKELQALG 203 (544) Q Consensus 135 v~ivEiGGTVG-------DIEs~pFlEAiRQl~~e~g~~~~n~~fiHvtlvP----~l~~~gE~KTKPTQhSVk~Lrs~G 203 (544) T Consensus 128 ~Vv~EGAGSpaEiNlr~~Di~Nm~~a~~~d------------apvILV~DIdRGGvfAsl~GT~~lL~--~~~r~~-VkG 192 (486) T COG1492 128 VVVIEGAGSPAEINLRDRDIANMGVAEIAD------------APVILVGDIDRGGVFASLYGTLALLP--ESDRAL-VKG 192 (486) T ss_pred EEEEECCCCHHHCCCCCCCCCCEEEEHHCC------------CCEEEEEEECCCCEEEEEEEHHEECC--HHHHCC-EEE T ss_conf 899963798232276636611002202338------------98899995115645417302122368--767600-147 Q ss_pred CCCCEEE--EECCCCCCHHHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHH Q ss_conf 9876899--92387589999999986419886772403898620266898876494889999838788886204789999 Q gi|254780195|r 204 VHPDILL--IRADRDIPEMERRKISLFCNVPMSAVIPALDVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTF 281 (544) Q Consensus 204 IqPDiiv--cRse~~l~~~~k~KIalfc~V~~~~Vi~~~Dv~sIY~VPl~l~~q~l~~~I~~~L~l~~~~~~~l~~W~~~ 281 (544) T Consensus 193 ----~iINkFRGd~~ll~~gik~Le~~tg~~vlGv~P~-------------------------~~~------~~~p~EDS 237 (486) T COG1492 193 ----FIINKFRGDESLLDPGLKWLEELTGVPVLGVLPY-------------------------LKD------ALRPAEDS 237 (486) T ss_pred ----EEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCC-------------------------CCC------CCCCCCCC T ss_conf ----9996317987887459999998619746756525-------------------------554------55764202 Q ss_pred HH----HHCCCCCCEEEEEEH-HHC-CCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCC Q ss_conf 98----741843437999952-001-481346888888888878736724167722565672344566216983997377 Q gi|254780195|r 282 CD----RTLSLKNEVKVAIVG-KYI-HLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGG 355 (544) Q Consensus 282 ~~----~~~~~~~~V~IaiVG-KY~-~l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGG 355 (544) T Consensus 238 ~~~~~~~~~~~~~~i~Iav~~lp~isNFtD~dp----------L~~~~~v~v~~v~~~--------~~l~~~dlvIlPGs 299 (486) T COG1492 238 LSLEQPKAGGNKRAIRIAVIRLPRISNFTDFDP----------LRAEPDVRVRFVKPG--------SDLRDADLVILPGS 299 (486) T ss_pred CCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHH----------HHCCCCEEEEEECCC--------CCCCCCCEEEECCC T ss_conf 270001025897754999965787556445214----------652798079996167--------77899888994798 Q ss_pred CC---------CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH Q ss_conf 78---------6550168889988740476322355769999 Q gi|254780195|r 356 FG---------KRGSEGKIAAIKFARENKIPFLGICFGMQMA 388 (544) Q Consensus 356 FG---------~RGieGkI~Ai~yARen~iP~LGIClGmQ~a 388 (544) T Consensus 300 k~t~~DL~~lr~~g~d~--~i~~~~~~-~~~viGICGG~QmL 338 (486) T COG1492 300 KNTIADLKILREGGMDE--KILEYARK-GGDVIGICGGYQML 338 (486) T ss_pred CCCHHHHHHHHHCCHHH--HHHHHHHC-CCCEEEECCHHHHH T ss_conf 56088999999769799--99999747-99799986357764 |
|
| >PRK06278 cobyrinic acid a,c-diamide synthase; Validated | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.04 Score=35.93 Aligned_cols=55 Identities=11% Similarity=0.155 Sum_probs=31.4 Q ss_pred CCCCCHHHHHHHHHHCCCCHHHEEECCCCCCHHH--HHHHHHHCCHHHHHHHHHCCCC Q ss_conf 8758999999998641988677240389862026--6898876494889999838788 Q gi|254780195|r 214 DRDIPEMERRKISLFCNVPMSAVIPALDVDDIYK--VPLSYHREGIDSVVLNAFGIEN 269 (544) Q Consensus 214 e~~l~~~~k~KIalfc~V~~~~Vi~~~Dv~sIY~--VPl~l~~q~l~~~I~~~L~l~~ 269 (544) T Consensus 149 tk~lt~S~i~kl-NYk~~~~~~IlSG~~kgkV~GTmVHn~LDn~~v~~N~l~~l~~~e 205 (482) T PRK06278 149 TKKLTYSKIQKL-NYKMVGKQNILSGVFKGNVYGTMVHNLLDNNFVVNNILKYLDITE 205 (482) T ss_pred CCEEEHHHHHHH-CCCCCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHCCCCH T ss_conf 752246554340-234367640552001684614545554242889999998728877 |
|
| >TIGR01382 PfpI intracellular protease, PfpI family; InterPro: IPR006286 Peptidases are grouped into clans and families | Back alignment and domain information |
|---|
Probab=91.38 E-value=0.087 Score=33.51 Aligned_cols=45 Identities=27% Similarity=0.438 Sum_probs=35.3 Q ss_pred CCCCEEEECCCCC-C---CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH Q ss_conf 1698399737778-6---5501688899887404763223557699999 Q gi|254780195|r 345 YGVHGILVPGGFG-K---RGSEGKIAAIKFARENKIPFLGICFGMQMAV 389 (544) Q Consensus 345 ~~~dGIlVPGGFG-~---RGieGkI~Ai~yARen~iP~LGIClGmQ~av 389 (544) T Consensus 75 ~~YDal~ipGG~a~~e~LR~d~~~~~lvR~f~e~gK~vaaIChgp~lLi 123 (189) T TIGR01382 75 EDYDALVIPGGRASPEYLRLDEKVIRLVREFVEKGKPVAAICHGPQLLI 123 (189) T ss_pred HHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCEEEE T ss_conf 2564789717735600014876899999998417881999845300000 |
Clans are groups of families for which there is evidence of common ancestry. Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad . This group of cysteine peptidases belong to MEROPS peptidase family C56 (Pfp1 endopeptidase, clan PC(C)). The member of this family from Pyrococcus horikoshii has been solved to 2 Angstrom resolution. It is an ATP-independent intracellular protease that crystallises as a hexameric ring. Cys-101 is proposed as the active site residue in a catalytic triad with the adjacent His-102 and a Glu residue from an adjacent monomer. A member of this family from Bacillus subtilis, GSP18, has been shown to be expressed in response to several forms of stress. A role in the degradation of small peptides has been suggested. This family is contained in a larger one of the thiamine biosynthesis protein ThiJ and its homologs.; GO: 0016798 hydrolase activity acting on glycosyl bonds. |
| >cd01391 Periplasmic_Binding_Protein_Type_1 Type 1 periplasmic binding fold superfamily | Back alignment and domain information |
|---|
Probab=90.63 E-value=1 Score=25.72 Aligned_cols=27 Identities=7% Similarity=0.070 Sum_probs=10.1 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCC Q ss_conf 688888888887873672416772256 Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAE 333 (544) Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse 333 (544) T Consensus 15 ~~~~~~g~~~~~~~~g~~~~l~~~~~~ 41 (269) T cd01391 15 GAQLLAGIELAAEEIGRGLEVILADSQ 41 (269) T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEECC T ss_conf 999999999999981997699998499 |
Type 1 periplasmic binding fold superfamily. This model and hierarchy represent the ligand binding domains of the LacI family of transcriptional regulators, periplasmic binding proteins of the ABC-type transport systems, the family C G-protein couples receptors (GPCRs), membrane bound guanylyl cyclases including the family of natriuretic peptide receptors (NPRs), and the N-terminal leucine/isoleucine/valine- binding protein (LIVBP)-like domains of the ionotropic glutamate receptors (iGluRs). In LacI-like transcriptional regulator and the bacterial periplasmic binding proteins the ligands are monosaccharides including lactose, ribose, fructose, xylose, arabinose, galactose/glucose, and other sugars, with a few exceptions. Periplasmic sugar binding proteins are one of the components of ABC transporters and are involved in the active transport of water-soluble ligands. The LacI family of proteins con |
| >cd06302 PBP1_LsrB_Quorum_Sensing Periplasmic binding domain of autoinducer-2 (AI-2) receptor LsrB from Salmonella typhimurium and its close homologs | Back alignment and domain information |
|---|
Probab=90.44 E-value=1.4 Score=24.82 Aligned_cols=11 Identities=18% Similarity=0.392 Sum_probs=4.8 Q ss_pred HHHHHHHHCCC Q ss_conf 99999997499 Q gi|254780195|r 194 HSVKELQALGV 204 (544) Q Consensus 194 hSVk~Lrs~GI 204 (544) T Consensus 72 ~~i~~A~~aGI 82 (298) T cd06302 72 PVLKKAREAGI 82 (298) T ss_pred HHHHHHHHCCC T ss_conf 99999986798 |
Periplasmic binding domain of autoinducer-2 (AI-2) receptor LsrB from Salmonella typhimurium and its close homologs from other bacteria. The members of this group are homologous to a family of periplasmic pentose/hexose sugar-binding proteins that function as the primary receptors for chemotaxis and transporters of many sugar based solutes in bacteria and archaea and that are a member of the type I periplasmic binding protein superfamily. LsrB binds a chemically distinct form of the AI-2 signal that lacks boron, in contrast to the Vibrio harveyi AI-2 signaling molecule that has an unusual furanosyl borate diester. Hence, many bacteria coordinate their gene expression according to the local density of their population by producing species specific AI-2. This process of quorum sensing allows LsrB to function as a periplasmic AI-2 binding p |
Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch
Homologous Structures Detected by PSI-BLAST against Nonredundant Database
| Identity | Alignment graph | Length | Definition | E-value |
| Target | 544 | CTP synthetase [Candidatus Liberibacter asiaticus str. | ||
| 1s1m_A | 545 | Crystal Structure Of E. Coli Ctp Synthetase Length | 0.0 | |
| 1vco_A | 550 | Crystal Structure Of T.Th. Hb8 Ctp Synthetase Compl | 0.0 | |
| 1vcm_A | 550 | Crystal Structure Of T.Th. Hb8 Ctp Synthetase Lengt | 0.0 | |
| 3nva_A | 535 | Dimeric Form Of Ctp Synthase From Sulfolobus Solfat | 0.0 | |
| 2vo1_A | 295 | Crystal Structure Of The Synthetase Domain Of Human | 1e-113 | |
| 3ihl_A | 282 | Human Ctps2 Crystal Structure Length = 282 | 1e-109 | |
| 2vkt_A | 289 | Human Ctp Synthetase 2 - Glutaminase Domain Length | 3e-64 | |
| 2v4u_A | 289 | Human Ctp Synthetase 2 - Glutaminase Domain In Comp | 1e-63 | |
| 2w7t_A | 273 | Trypanosoma Brucei Ctps - Glutaminase Domain With B | 1e-54 | |
| 3fij_A | 254 | Crystal Structure Of A Uncharacterized Protein Lin1 | 2e-05 |
| gi|50513424|pdb|1S1M|A Chain A, Crystal Structure Of E. Coli Ctp Synthetase Length = 545 | Back alignment and structure |
Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats.
Identities = 280/544 (51%), Positives = 367/544 (67%), Gaps = 6/544 (1%)
Query: 2 VKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFV 61
YIF+TGGVVSSLGKG+AAASL A+L+A V + KLDPY+N DPGTMSP+QHGEVFV
Sbjct: 3 TNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFV 62
Query: 62 TDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNE 121
T+DG E DLD GHYERF+ ++ +N T GRIY +V+ +ERRGDYLG TVQVIPH+TN
Sbjct: 63 TEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNA 122
Query: 122 IKEFITQGNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPYI 181
IKE + +G E D V+ EIGGT+GDIE +PF+EAIRQ E L++HLTL+PY+
Sbjct: 123 IKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGR--EHTLFMHLTLVPYM 180
Query: 182 RSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPALD 241
+SGE+KTKPTQHSVKEL ++G+ PDIL+ R+DR +P ER KI+LFCNVP AVI D
Sbjct: 181 AASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKD 240
Query: 242 VDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKYI 301
VD IYK+P +G+D + F N + W+ + +EV + +VGKYI
Sbjct: 241 VDSIYKIPGLLKSQGLDDYICKRF-SLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYI 299
Query: 302 HLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGS 361
L DAY+S+IEAL+H G+ N V + ID++ +E + G+ ILVPGGFG RG
Sbjct: 300 ELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGV-EILKGLDAILVPGGFGYRGV 358
Query: 362 EGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEF-SEAGVPVIALMSE 420
EG I +FAREN IP+LGIC GMQ+A+I+ AR++A + NA STEF + PV+AL++E
Sbjct: 359 EGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITE 418
Query: 421 WMKGDQQ-EKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYR 479
W + E R DLG TMRLGA L +++L+ ++Y I ERHRHRYEVN
Sbjct: 419 WRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLL 478
Query: 480 EKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQATVL 539
+++E GL+ +G S D L E++E NHPWF+ Q+HPE S P D HPLF F++A
Sbjct: 479 KQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASE 538
Query: 540 YSQS 543
+ +
Sbjct: 539 FQKR 542
|
| >gi|52696106|pdb|1VCO|A Chain A, Crystal Structure Of T.Th. Hb8 Ctp Synthetase Complex With Glutamine Length = 550 | Back alignment and structure |
Score = 690 bits (1780), Expect = 0.0, Method: Composition-based stats.
Identities = 274/549 (49%), Positives = 368/549 (67%), Gaps = 20/549 (3%)
Query: 3 KYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVT 62
KY+FITGGVVSSLGKG+ +SLGALL+A Y+V K+DPY+N D GTM P +HGEVFVT
Sbjct: 13 KYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDPYVNVDAGTMRPYEHGEVFVT 72
Query: 63 DDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEI 122
DG E DLD GHYERF+ + ++ +N+T G++Y +VI +ERRG+YL TVQVIPH+T+EI
Sbjct: 73 ADGAETDLDIGHYERFLDMDLSRGNNLTTGQVYLSVIQKERRGEYLSQTVQVIPHITDEI 132
Query: 123 KEFITQGNEDA--DFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
KE I + E+ + V+ E+GGT+GDIE +PF+EAIRQF + LY+HLTL+PY
Sbjct: 133 KERIRKVAEEQKAEIVVVEVGGTVGDIESLPFLEAIRQFRFDEGEG--NTLYLHLTLVPY 190
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
+ +S E KTKPTQHSV L+ +G+ PDIL++R+ R +PE RRK++LF NV V +
Sbjct: 191 LETSEEFKTKPTQHSVATLRGVGIQPDILVLRSARPVPEEVRRKVALFTNVRPGHVFSSP 250
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKY 300
V+ +Y+VPL +G+ V A G+E V +P + WQ + VK+AI GKY
Sbjct: 251 TVEHLYEVPLLLEEQGLGRAVERALGLEAV-IPNLSFWQEAVRVLKHPERTVKIAIAGKY 309
Query: 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG 360
+ + DAY SL+EALRH+G+ N +V++ W+DAE+LE D + F V GILVPGGFG RG
Sbjct: 310 VKMPDAYLSLLEALRHAGIKNRARVEVKWVDAESLEAADLEEAFRDVSGILVPGGFGVRG 369
Query: 361 SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFS-EAGVPVIALMS 419
EGK+ A ++ARE KIP+LGIC G+Q+AVIE ARN+AG+ A STEF PVI LM
Sbjct: 370 IEGKVRAAQYARERKIPYLGICLGLQIAVIEFARNVAGLKGANSTEFDPHTPHPVIDLMP 429
Query: 420 EWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYR 479
E + + LG TMRLG + + +K TL+ R+YG + + ERHRHRYEVN Y
Sbjct: 430 EQL---------EVEGLGGTMRLGDWPMRIKPGTLLHRLYGKEEVLERHRHRYEVNPLYV 480
Query: 480 EKLEGCGLKFSGFSVDHA-----LPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFI 534
+ LE GL S + L E +E +HP+F+G+Q HPE KSRP+ P P FV F+
Sbjct: 481 DGLERAGLVVSATTPGMRGRGAGLVEAIELKDHPFFLGLQSHPEFKSRPMRPSPPFVGFV 540
Query: 535 QATVLYSQS 543
+A + Y +
Sbjct: 541 EAALAYQER 549
|
| gi|52696104|pdb|1VCM|A Chain A, Crystal Structure Of T.Th. Hb8 Ctp Synthetase Length = 550 | Back alignment and structure |
Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats.
Identities = 274/549 (49%), Positives = 368/549 (67%), Gaps = 20/549 (3%)
Query: 3 KYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVT 62
KY+FITGGVVSSLGKG+ +SLGALL+A Y+V K+DPY+N D GTM P +HGEVFVT
Sbjct: 13 KYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDPYVNVDAGTMRPYEHGEVFVT 72
Query: 63 DDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEI 122
DG E DLD GHYERF+ + ++ +N+T G++Y +VI +ERRG+YL TVQVIPH+T+EI
Sbjct: 73 ADGAETDLDIGHYERFLDMDLSRGNNLTTGQVYLSVIQKERRGEYLSQTVQVIPHITDEI 132
Query: 123 KEFITQGNEDA--DFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
KE I + E+ + V+ E+GGT+GDIE +PF+EAIRQF + LY+HLTL+PY
Sbjct: 133 KERIRKVAEEQKAEIVVVEVGGTVGDIESLPFLEAIRQFRFDEGEG--NTLYLHLTLVPY 190
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
+ +S E KTKPTQHSV L+ +G+ PDIL++R+ R +PE RRK++LF NV V +
Sbjct: 191 LETSEEFKTKPTQHSVATLRGVGIQPDILVLRSARPVPEEVRRKVALFTNVRPGHVFSSP 250
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTLSLKNEVKVAIVGKY 300
V+ +Y+VPL +G+ V A G+E V +P + WQ + VK+AI GKY
Sbjct: 251 TVEHLYEVPLLLEEQGLGRAVERALGLEAV-IPNLSFWQEAVRVLKHPERTVKIAIAGKY 309
Query: 301 IHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRG 360
+ + DAY SL+EALRH+G+ N +V++ W+DAE+LE D + F V GILVPGGFG RG
Sbjct: 310 VKMPDAYLSLLEALRHAGIKNRARVEVKWVDAESLEAADLDEAFRDVSGILVPGGFGVRG 369
Query: 361 SEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFS-EAGVPVIALMS 419
EGK+ A ++ARE KIP+LGIC G+Q+AVIE ARN+AG+ A STEF PVI LM
Sbjct: 370 IEGKVRAAQYARERKIPYLGICLGLQIAVIEFARNVAGLKGANSTEFDPHTPHPVIDLMP 429
Query: 420 EWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNVRYR 479
E + + LG TMRLG + + +K TL+ R+YG + + ERHRHRYEVN Y
Sbjct: 430 EQL---------EVEGLGGTMRLGDWPMRIKPGTLLHRLYGKEEVLERHRHRYEVNPLYV 480
Query: 480 EKLEGCGLKFSGFSVDHA-----LPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFI 534
+ LE GL S + L E +E +HP+F+G+Q HPE KSRP+ P P FV F+
Sbjct: 481 DGLERAGLVVSATTPGMRGRGAGLVEAIELKDHPFFLGLQSHPEFKSRPMRPSPPFVGFV 540
Query: 535 QATVLYSQS 543
+A + Y +
Sbjct: 541 EAALAYQER 549
|
| gi|306440665|pdb|3NVA|A Chain A, Dimeric Form Of Ctp Synthase From Sulfolobus Solfataricus Length = 535 | Back alignment and structure |
Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats.
Identities = 237/540 (43%), Positives = 350/540 (64%), Gaps = 18/540 (3%)
Query: 3 KYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVT 62
KYI +TGGV+SS+GKG AS+G LL+ Y V K+DPY+N D GTM+P HGEVFVT
Sbjct: 4 KYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYINVDAGTMNPYMHGEVFVT 63
Query: 63 DDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEI 122
+DG E DLD GHYERFM ++ K +NITAG++Y VI +ER G YLG TVQ+IPHVT++I
Sbjct: 64 EDGAETDLDLGHYERFMDVNMTKYNNITAGKVYFEVIKKEREGKYLGQTVQIIPHVTDQI 123
Query: 123 KEFITQGNE--DADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYIHLTLMPY 180
K+ I ++ +A+ + EIGGT+GDIE +PF+EA+RQ E +++H+ L+ Y
Sbjct: 124 KDMIRYASKINNAEITLVEIGGTVGDIESLPFLEAVRQLKLEEGE--DNVIFVHIALVEY 181
Query: 181 IRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPMSAVIPAL 240
+ +GELKTKP QHSV+EL+ +G+ PD ++ RA + + RRKI+LF NV + ++ +
Sbjct: 182 LSVTGELKTKPLQHSVQELRRIGIQPDFIVGRATLPLDDETRRKIALFTNVKVDHIVSSY 241
Query: 241 DVDDIYKVPLSYHREGIDSVVLNAFGIENVSLPQIDNWQTFCDRTL--SLKNEVKVAIVG 298
DV+ Y+VP+ + + S +L+ +E+ + + +W +F + + K + +A+VG
Sbjct: 242 DVETSYEVPIILESQKLVSKILSRLKLEDRQV-DLTDWISFVNNIKGINSKKTINIALVG 300
Query: 299 KYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKE--DPVKHFYGVHGILVPGGF 356
KY LKD+Y S+ EA+ H+ + +L WI++ LE + + + V+GI+V GF
Sbjct: 301 KYTKLKDSYISIKEAIYHASAYIGVRPKLIWIESTDLESDTKNLNEILGNVNGIIVLPGF 360
Query: 357 GKRGSEGKIAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIA 416
G RG+EGKI AIK+ARE+ IPFLGICFG Q++++E AR++ G+ A STE + +
Sbjct: 361 GSRGAEGKIKAIKYAREHNIPFLGICFGFQLSIVEFARDVLGLSEANSTEINPNTKDPVI 420
Query: 417 LMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIYGLDLIPERHRHRYEVNV 476
+ + K LG TMRLGA + LKE T+ ++YG ++ ERHRHRYEVN
Sbjct: 421 TLLDEQK--------NVTQLGGTMRLGAQKIILKEGTIAYQLYGKKVVYERHRHRYEVNP 472
Query: 477 RYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQA 536
+Y + LE GL SG S + L E++E ++ +F+ Q HPE KSRP +P P+++ FI+A
Sbjct: 473 KYVDILEDAGLVVSGISENG-LVEIIELPSNKFFVATQAHPEFKSRPTNPSPIYLGFIRA 531
|
| >gi|169791764|pdb|2VO1|A Chain A, Crystal Structure Of The Synthetase Domain Of Human Ctp Synthetase Length = 295 | Back alignment and structure |
Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats.
Identities = 125/272 (45%), Positives = 178/272 (65%), Gaps = 10/272 (3%)
Query: 2 VKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFV 61
+KYI +TGGV+S +GKG+ A+S+G +L++ V K+DPY+N D GT SP +HGEVFV
Sbjct: 23 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFV 82
Query: 62 TDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNE 121
DDGGE DLD G+YERF+ I K +N+T G+IY+ VI++ER+GDYLG TVQV+PH+T+
Sbjct: 83 LDDGGEVDLDLGNYERFLDIRLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDA 142
Query: 122 IKEFITQ--------GNEDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYI 173
I+E++ + + + E+GGT+GDIE MPF+EA RQF + I
Sbjct: 143 IQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFIEAFRQFQFKVKR--ENFCNI 200
Query: 174 HLTLMPYIRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPM 233
H++L+P S+GE KTKPTQ+SV+EL+ LG+ PD+++ R + + KIS+FC+V
Sbjct: 201 HVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEP 260
Query: 234 SAVIPALDVDDIYKVPLSYHREGIDSVVLNAF 265
VI DV IY+VPL +G+ L
Sbjct: 261 EQVICVHDVSSIYRVPLLLEEQGVVDYFLRRL 292
|
| >gi|261278796|pdb|3IHL|A Chain A, Human Ctps2 Crystal Structure Length = 282 | Back alignment and structure |
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 125/273 (45%), Positives = 181/273 (66%), Gaps = 10/273 (3%)
Query: 2 VKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFV 61
+KYI +TGGV+S +GKG+ A+S+G +L++ +V K+DPY+N D GT SP +HGEVFV
Sbjct: 1 MKYILVTGGVISGIGKGIIASSIGTILKSCGLRVTAIKIDPYINIDAGTFSPYEHGEVFV 60
Query: 62 TDDGGEADLDFGHYERFMGISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNE 121
+DGGE DLD G+YERF+ I+ K +NIT G+IY++VI++ERRGDYLG TVQV+PH+T+
Sbjct: 61 LNDGGEVDLDLGNYERFLDINLYKDNNITTGKIYQHVINKERRGDYLGKTVQVVPHITDA 120
Query: 122 IKEFITQGN--------EDADFVICEIGGTIGDIEVMPFVEAIRQFGNEFSHRGSKALYI 173
++E++ E+ + E+GGTIGDIE MPFVEA RQF +F + I
Sbjct: 121 VQEWVMNQAKVPVDGNKEEPQICVIELGGTIGDIEGMPFVEAFRQF--QFKAKRENFCNI 178
Query: 174 HLTLMPYIRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVPM 233
H++L+P + ++GE KTKPTQ+SV+ L+ LG+ PD+++ R+ I + KIS+FC+V
Sbjct: 179 HVSLVPQLSATGEQKTKPTQNSVRALRGLGLSPDLIVCRSSTPIEMAVKEKISMFCHVNP 238
Query: 234 SAVIPALDVDDIYKVPLSYHREGIDSVVLNAFG 266
VI DV Y+VP+ + I
Sbjct: 239 EQVICIHDVSSTYRVPVLLEEQSIVKYFKERLH 271
|
| >gi|165761263|pdb|2VKT|A Chain A, Human Ctp Synthetase 2 - Glutaminase Domain Length = 289 | Back alignment and structure |
Score = 250 bits (640), Expect = 3e-64, Method: Composition-based stats.
Identities = 110/268 (41%), Positives = 151/268 (56%), Gaps = 23/268 (8%)
Query: 283 DRTLSLKNEVKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEK----- 337
+ +A+VGKY L+D Y S+ +AL HS ++ K+ L +ID+ LEK
Sbjct: 17 NLYFQSMKICSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETE 76
Query: 338 -----EDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLGICFGMQMAVIEA 392
+ + GILVPGGFG RG+ GK+ AI +AR KIPFLG+C GMQ+AVIE
Sbjct: 77 DPVKFHEAWQKLCKADGILVPGGFGIRGTLGKLQAISWARTKKIPFLGVCLGMQLAVIEF 136
Query: 393 ARNLAGIPNACSTEFSE-AGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLK- 450
ARN + +A STEF A VP++ M E G +LG TMRLG K
Sbjct: 137 ARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPG----------NLGGTMRLGIRRTVFKT 186
Query: 451 EETLISRIYG-LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPW 509
E +++ ++YG + I ERHRHR+EVN ++ E L F G VD E++E NHP+
Sbjct: 187 ENSILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELANHPY 246
Query: 510 FIGVQYHPELKSRPLDPHPLFVSFIQAT 537
F+GVQ+HPE SRP+ P P ++ + A
Sbjct: 247 FVGVQFHPEFSSRPMKPSPPYLGLLLAA 274
|
| >gi|209156387|pdb|2V4U|A Chain A, Human Ctp Synthetase 2 - Glutaminase Domain In Complex With 5-Oxo-L-Norleucine Length = 289 | Back alignment and structure |
Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats.
Identities = 109/268 (40%), Positives = 150/268 (55%), Gaps = 23/268 (8%)
Query: 283 DRTLSLKNEVKVAIVGKYIHLKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEK----- 337
+ +A+VGKY L+D Y S+ +AL HS ++ K+ L +ID+ LEK
Sbjct: 17 NLYFQSMKICSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETE 76
Query: 338 -----EDPVKHFYGVHGILVPGGFGKRGSEGKIAAIKFARENKIPFLGICFGMQMAVIEA 392
+ + GILVPGGFG RG+ GK+ AI +AR KIPFLG+ GMQ+AVIE
Sbjct: 77 DPVKFHEAWQKLCKADGILVPGGFGIRGTLGKLQAISWARTKKIPFLGVXLGMQLAVIEF 136
Query: 393 ARNLAGIPNACSTEFSE-AGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLK- 450
ARN + +A STEF A VP++ M E G +LG TMRLG K
Sbjct: 137 ARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPG----------NLGGTMRLGIRRTVFKT 186
Query: 451 EETLISRIYG-LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPW 509
E +++ ++YG + I ERHRHR+EVN ++ E L F G VD E++E NHP+
Sbjct: 187 ENSILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELANHPY 246
Query: 510 FIGVQYHPELKSRPLDPHPLFVSFIQAT 537
F+GVQ+HPE SRP+ P P ++ + A
Sbjct: 247 FVGVQFHPEFSSRPMKPSPPYLGLLLAA 274
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