254780201

 Score =  605 bits (1561), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 287/390 (73%), Positives = 335/390 (85%)

Query: 3   KVFRLKSKLGKIENLLLRLDVEEKGNMQAIYIPAHVSGYYVLWSFSPKQRITSKDVHFQE 62
           K+FRLK K   +E L+ RLDVE KG++  +YIPA++SGYY+LWS S +Q+ITS+DV F+E
Sbjct: 8   KIFRLKIKSETLEKLVFRLDVENKGSVNTLYIPANISGYYMLWSLSKEQKITSEDVFFEE 67

Query: 63  LSIFESFIFWLRSFLAFSKYSKLSFPSCRIFFYGSRKEQKAFLRLNRFMSNSRMPFDSEK 122
           ++ F++ +FWLRSFL FSKYS+LSFPSCRIFFYGSRK++KAF RLNRFMSNSRMPFD +K
Sbjct: 68  VTTFKACLFWLRSFLTFSKYSQLSFPSCRIFFYGSRKDKKAFFRLNRFMSNSRMPFDGKK 127

Query: 123 FLYVKELFEGWNDRPSSPKKSGLTIKSKIAIVVHCYYQDTWIEISHILLRLNFDFDLFVT 182
           FLY+KELFEGW +  S   K  + I SKIAIVVHCYYQDTW EISH+LLRLNFDFDLF+T
Sbjct: 128 FLYIKELFEGWKNLSSLDNKGKIKINSKIAIVVHCYYQDTWDEISHLLLRLNFDFDLFIT 187

Query: 183 VVEANKDFEQDVLKYFPSAQLYVMENKGRDVRPFLYLLELGVFDRYDYLCKIHGKKSQRE 242
            V+ NKDFEQDVLK FPSA+LYVMENKGRDV PFL LLELGVF  YDYLCKIHGKKS R 
Sbjct: 188 TVKKNKDFEQDVLKNFPSARLYVMENKGRDVLPFLCLLELGVFYDYDYLCKIHGKKSARR 247

Query: 243 GYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFAKRSE 302
            YHP EGI+WRRW+FFDLLGFSDIA+RIIN FEQNP +GMIGS R+RRYK++SFF KRS+
Sbjct: 248 NYHPFEGILWRRWIFFDLLGFSDIALRIINKFEQNPSIGMIGSGRFRRYKKYSFFKKRSK 307

Query: 303 VYRRVIDLAKRAGFPTKRLHLDFFNGTMFWVKPKCLEPLRNLHLIGEFEEERNLKDGALE 362
           VY+RV+DLA+R  FP + L LDFFNGTMFWV+PKCLEPLRN+HL GEFEEE NL+DGALE
Sbjct: 308 VYKRVVDLARRIDFPVEELDLDFFNGTMFWVRPKCLEPLRNIHLTGEFEEECNLEDGALE 367

Query: 363 HAVERFFACSVRYTEFSIESVDCVAEYERL 392
           HAVERFF  SV+   FS+ESVDCVAEY++L
Sbjct: 368 HAVERFFPLSVQRAGFSLESVDCVAEYDQL 397

Species: Candidatus Liberibacter solanacearum
Genus: Candidatus Liberibacter
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  296 bits (758), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 162/370 (43%), Positives = 220/370 (59%), Gaps = 9/370 (2%)

Query: 23  VEEKGNMQAIYIPAHVS--GYYVLWSFSPKQRITSKDVHFQELSIFESFIFWLRSFLAFS 80
           V  K    +I++P      GY +  S        S  +  +++S F  F FW+RS   F 
Sbjct: 27  VSSKNRKLSIFLPVSGCRKGYLLFVSRRENWNFDSNHLVIRKVSFFLGFFFWIRSLFLFK 86

Query: 81  KYSKLSFPSCRIFFYGSRKEQKAFLRLNRFMSNSRMPFDSEKFLYVKELFEGWNDRPSSP 140
           +Y  L +   RI  YGSR  +K F   N+ M    +PFD EK      L  GW D PSS 
Sbjct: 87  RYQTLRYDENRIIAYGSRIGKKFFACSNKDMLARGVPFDGEKIHRFPRLLHGW-DSPSSE 145

Query: 141 KKSGLTIKSKIAIVVHCYYQDTWIEISHILLRLNFDFDLFVTVVEANKDFEQDVLKYFPS 200
           K + + I+S++AIVVH YY D W EI+++L  LNF FDL +T+V      + ++LK FP+
Sbjct: 146 KIASVKIQSRVAIVVHIYYADLWAEIANLLSGLNFSFDLHITLVTEIASIKSEILKRFPN 205

Query: 201 AQLYVMENKGRDVRPFLYLLELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDL 260
           A +YVMEN GRD+R FL LLE G  D YDY+CKIHGKKS+R G+   +G +WRRWLFFDL
Sbjct: 206 AHIYVMENYGRDIRSFLKLLEGGKLDSYDYVCKIHGKKSKRNGHVWWDGDLWRRWLFFDL 265

Query: 261 LGFSDIAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFAKRSEVYRRVIDLAKRAGFPTKR 320
           LG   IA+ II TFE+ P +GMIGSR YR  ++ S    R      V  +A + G   + 
Sbjct: 266 LGAPGIALEIIKTFEKYPKIGMIGSRTYRYDQKISLGNNR----EFVCAIANKMGVSFED 321

Query: 321 LHLDFFNGTMFWVKPKCLEPLRNLHLIGEFEEERNLK--DGALEHAVERFFACSVRYTEF 378
             +DFF GTMFWV+P+ L+P++NL L   F+ + ++   DG LEHA+ER F+ SV    F
Sbjct: 322 TKIDFFGGTMFWVRPQALDPIKNLALTQYFKSKVDMVGLDGCLEHAIERCFSISVEKANF 381

Query: 379 SIESVDCVAE 388
            +  VDC++E
Sbjct: 382 DLAYVDCLSE 391

Species: Candidatus Liberibacter solanacearum
Genus: Candidatus Liberibacter
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  268 bits (686), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 146/356 (41%), Positives = 212/356 (59%), Gaps = 4/356 (1%)

Query: 40  GYYVLWSFSPKQRITSKDVHFQELSIFESFIFWLRSFLAFSKYSKLSFPSCRIFFYGSRK 99
           GY++  S        S   + ++++++  F FW  + L + +  KL +    +  YGSR 
Sbjct: 9   GYFLFTSHFKSWNFYSDHFNIEKVNLWGGFFFWFWT-LFYKRSKKLCYDENYVVAYGSRS 67

Query: 100 EQKAFLRLNRFMSNSRMPFDSEKFLYVKELFEGWNDRPSSPKKSGLTIKSKIAIVVHCYY 159
            +K F + N +M    + FD ++  +  +L  GW + P+  K   + IK+KIAIVVH YY
Sbjct: 68  GKKFFAQSNLYMMERELHFDGQRIHHFPQLLHGW-ESPAMGKVMQIAIKAKIAIVVHLYY 126

Query: 160 QDTWIEISHILLRLNFDFDLFVTVVEANKDFEQDVLKYFPSAQLYVMENKGRDVRPFLYL 219
            D WIEI+++L  L+  FDL VT+V  +   + ++LK FP+A++++MEN GRDV PFL L
Sbjct: 127 IDLWIEIANLLSNLSISFDLHVTLVTESASIKSEILKIFPAARIHIMENHGRDVLPFLIL 186

Query: 220 LELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPC 279
           LE      YDY+CKIHGKKS+R+GY   EG +WRRWLF+DLLG   +  +II TF+ +  
Sbjct: 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRD 246

Query: 280 LGMIGSRRYRRYKRWSFFAKRSEVYRRVI-DLAKRAGFPTKRLHLDFFNGTMFWVKPKCL 338
           +GMIGSR YR   ++  +       R +I  LA R G   +   LDFF GTMFWV+ + L
Sbjct: 247 IGMIGSRAYRYPNKYCDYTCSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEAL 306

Query: 339 EPLRNLHLIGEFEEE-RNLKDGALEHAVERFFACSVRYTEFSIESVDCVAEYERLL 393
           +P++NL L   FE +     DG +EHAVER F+ SV+   F I  VDC+  Y + L
Sbjct: 307 DPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKANFRISDVDCILGYRKSL 362

Species: Candidatus Liberibacter asiaticus
Genus: Candidatus Liberibacter
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 95/227 (41%), Positives = 128/227 (56%), Gaps = 3/227 (1%)

Query: 146 TIKSKIAIVVHCYYQDTWIEISHILLRLNFDFDLFVTVVEANKDFEQDVLKYFPSAQLYV 205
           T++ KIA+ +H +Y D W E   +L      F LF+T+   +    Q V   FP A++ V
Sbjct: 136 TVEPKIAVALHLHYPDLWPEFEALLEATGRQFQLFLTLTRPDAALAQRVQARFPGAEITV 195

Query: 206 MENKGRDVRPFLYLLELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSD 265
            EN+GRDV PF+ LL  G FD +D +CK+HGKKS + G   + G IWR+   FDL+G   
Sbjct: 196 YENRGRDVGPFIQLLREGKFDPFDLICKLHGKKSGQSGPRMVLGEIWRQVSAFDLIGSRG 255

Query: 266 IAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFAKR-SEVYRRVIDLAKRAGFPTKRLHLD 324
           +  RII  FE++P   MIGSRR+R    W        E     ++L +  G P+    LD
Sbjct: 256 VVDRIIANFERSPDTQMIGSRRFRLPNEWKGEKSAWGENRAMALNLLETMGMPSSS-RLD 314

Query: 325 FFNGTMFWVKPKCLEPLRNLHL-IGEFEEERNLKDGALEHAVERFFA 370
           FF GTMFWV+   LEPLR L L +  F EE   +DG L+HA+ER   
Sbjct: 315 FFAGTMFWVRRGALEPLRRLDLPLAAFPEETGQQDGTLQHALERVLG 361

Species: Mesorhizobium loti
Genus: Mesorhizobium
Family: Phyllobacteriaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/236 (38%), Positives = 130/236 (55%), Gaps = 5/236 (2%)

Query: 137 PSSPKKSGLTIKSKIAIVVHCYYQDTWIEISHILLRLNFDFDLFVTVVEANKDFEQDVLK 196
           P +PK   L  +    I+VH +Y D W +    L  L   F L VT+ E+N DF   V  
Sbjct: 153 PGAPKPLQLNGRIATGIIVHLHYCDVWPDFEKRLRNLTCPFSLIVTLNESNPDFAARVAG 212

Query: 197 YFPSAQLYVMENKGRDVRPFLYLLELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWL 256
            FP+A++ V  N+GRDV PF+ LL  G  D ++ +CK+HGKK+   G   I G IWRR L
Sbjct: 213 QFPNAKVLVYPNRGRDVGPFIQLLREGHLDDFELICKLHGKKTVSLGPRMIFGEIWRRLL 272

Query: 257 FFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFAKRSEVYRRVIDLAKRAGF 316
             DL+G  ++   I+  F   P LG++GS  +R     ++           ++LAKR G 
Sbjct: 273 LNDLVGSDELVRAILQRFISQPGLGLVGSSHFRG----NYLGTWPRNAALTLELAKRLGC 328

Query: 317 PTKRLHLDFFNGTMFWVKPKCLEPLRNLHLI-GEFEEERNLKDGALEHAVERFFAC 371
           P +R  LDFF GTMFWV+ + L+ L++L+L   +F  E    DG L+HA+ER F  
Sbjct: 329 PEERFKLDFFAGTMFWVRRELLDLLKSLNLSQDDFPVEAGQTDGTLQHALERIFGA 384

Species: Afipia sp. 1NLS2
Genus: Afipia
Family: Bradyrhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 120/240 (50%), Gaps = 19/240 (7%)

Query: 146 TIKSKIAIVVHCYYQDTWIEISHILLRLNFDFDLFVTVVEANKDFEQDVLKYFPS----A 201
           ++ S+ AIV+H ++ D    I   +  +  D+D+FV+V   +    +  ++YF      A
Sbjct: 314 SLSSRFAIVLHLFHIDLIDAICAYMRNVIVDYDVFVSVKSISD--RRMAVRYFQEHKIRA 371

Query: 202 QLYVMENKGRDVRPFLYLLELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLL 261
            +++  N GRDV PF+ LL  G+ DRYD +CKIH KKS    YH   G  WR  L   LL
Sbjct: 372 SVFIHPNIGRDVGPFISLLNTGLLDRYDAVCKIHSKKSV---YHD-GGGQWRDDLMKALL 427

Query: 262 GFSDIAIRIINTFEQNPCLGMIG--SRRYRRYKRWSFFAKRSEVYRRVIDLAKRAGFPTK 319
           G S   +R++  F+ +P  G++G  S      + W    +R  V      LA   G   K
Sbjct: 428 GSSFDVLRVLRAFDDHPACGIVGPESAYLSNARFWGGNEERLRV------LAAETGIEEK 481

Query: 320 RLHLDFFNGTMFWVKPKCLEPLRNLHL-IGEFEEERNLKDGALEHAVERFFACSVRYTEF 378
           R+ L FF GTMFW +P  L  LR   + + EF+ E   +D  L H +ER F   V    F
Sbjct: 482 RIRLGFFAGTMFWFRPAALSALRARSIGLSEFDPEAGQRDATLAHVIERLFVLWVEQAGF 541

Species: Xanthomonas oryzae
Genus: Xanthomonas
Family: Xanthomonadaceae
Order: Xanthomonadales
Class: Gammaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 120/240 (50%), Gaps = 19/240 (7%)

Query: 146 TIKSKIAIVVHCYYQDTWIEISHILLRLNFDFDLFVTVVEANKDFEQDVLKYFPS----A 201
           ++ S+ AIV+H ++ D    I   +  +  D+D+FV+V   +    +  ++YF      A
Sbjct: 314 SLSSRFAIVLHLFHIDLIDAICAYMRNVIVDYDVFVSVKSISD--RRMAVRYFQEHKIRA 371

Query: 202 QLYVMENKGRDVRPFLYLLELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLL 261
            +++  N GRDV PF+ LL  G+ DRYD +CKIH KKS    YH   G  WR  L   LL
Sbjct: 372 SVFIHPNIGRDVGPFISLLNTGLLDRYDAVCKIHSKKSV---YHD-GGGQWRDDLMKALL 427

Query: 262 GFSDIAIRIINTFEQNPCLGMIG--SRRYRRYKRWSFFAKRSEVYRRVIDLAKRAGFPTK 319
           G S   +R++  F+ +P  G++G  S      + W    +R  V      LA   G   K
Sbjct: 428 GSSFDVLRVLRAFDDHPACGIVGPESAYLSNARFWGGNEERLRV------LAAETGIEEK 481

Query: 320 RLHLDFFNGTMFWVKPKCLEPLRNLHL-IGEFEEERNLKDGALEHAVERFFACSVRYTEF 378
           R+ L FF GTMFW +P  L  LR   + + EF+ E   +D  L H +ER F   V    F
Sbjct: 482 RIRLGFFAGTMFWFRPAALSALRARSIGLSEFDPEAGQRDATLAHVIERLFVLWVEQAGF 541

Species: Xanthomonas oryzae
Genus: Xanthomonas
Family: Xanthomonadaceae
Order: Xanthomonadales
Class: Gammaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  126 bits (316), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 120/240 (50%), Gaps = 19/240 (7%)

Query: 146 TIKSKIAIVVHCYYQDTWIEISHILLRLNFDFDLFVTVVEANKDFEQDVLKYFPS----A 201
           ++ S+ AIV+H ++ D    I   +  +  D+D+FV+V   +    +  ++YF      A
Sbjct: 314 SLSSRFAIVLHLFHIDLIDAICAYMRNVIVDYDVFVSVKSISD--RRMAVRYFQEHKIRA 371

Query: 202 QLYVMENKGRDVRPFLYLLELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLL 261
            +++  N GRDV PF+ LL  G+ DRYD +CKIH KKS    YH   G  WR  L   LL
Sbjct: 372 SVFIHPNIGRDVGPFISLLNTGLLDRYDAVCKIHSKKSV---YHD-GGGQWRDDLMKALL 427

Query: 262 GFSDIAIRIINTFEQNPCLGMIG--SRRYRRYKRWSFFAKRSEVYRRVIDLAKRAGFPTK 319
           G S   +R++  F+ +P  G++G  S      + W    +R  V      LA   G   K
Sbjct: 428 GSSFDVLRVLRAFDDHPACGIVGPESAYLSNARFWGGNEERLRV------LAAETGIEEK 481

Query: 320 RLHLDFFNGTMFWVKPKCLEPLRNLHL-IGEFEEERNLKDGALEHAVERFFACSVRYTEF 378
           R+ L FF GTMFW +P  L  LR   + + EF+ E   +D  L H +ER F   V    F
Sbjct: 482 RIRLGFFAGTMFWFRPAALSALRARSIGLSEFDPEAGQRDATLAHVIERLFVLWVEQAGF 541

Species: Xanthomonas oryzae
Genus: Xanthomonas
Family: Xanthomonadaceae
Order: Xanthomonadales
Class: Gammaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  126 bits (316), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 121/241 (50%), Gaps = 21/241 (8%)

Query: 146 TIKSKIAIVVHCYYQDTWIEISHILLRLNFDFDLFVTVVEANKDFEQDVLKYFPS----A 201
           ++ S+ AIV+H ++ D    I   +  +  D+D+FV+V   +    +  ++YF      A
Sbjct: 314 SLSSRFAIVLHLFHIDLIDAICAYMRNVIVDYDVFVSVKSISD--RRMAVRYFQEHKIRA 371

Query: 202 QLYVMENKGRDVRPFLYLLELGVFDRYDYLCKIHGKKSQ-REGYHPIEGIIWRRWLFFDL 260
            +++  N GRDV PF+ LL  G+ DRYD +CKIH KKS  R+G     G  WR  L   L
Sbjct: 372 SVFIHPNIGRDVGPFISLLNTGLLDRYDAVCKIHSKKSVYRDG-----GGQWRDDLMKAL 426

Query: 261 LGFSDIAIRIINTFEQNPCLGMIG--SRRYRRYKRWSFFAKRSEVYRRVIDLAKRAGFPT 318
           LG S   +R++  F+ +P  G++G  S      + W    +R  V      LA   G   
Sbjct: 427 LGSSFDVLRVLRAFDDHPACGIVGPESAYLSNARFWGGNEERLRV------LAAETGIEE 480

Query: 319 KRLHLDFFNGTMFWVKPKCLEPLRNLHL-IGEFEEERNLKDGALEHAVERFFACSVRYTE 377
           KR+ L FF GTMFW +P  L  LR   + + EF+ E   +D  L H +ER F   V    
Sbjct: 481 KRIRLGFFAGTMFWFRPAALSALRARSIGLSEFDPEAGQRDATLAHVIERLFVLWVEQAG 540

Query: 378 F 378
           F
Sbjct: 541 F 541

Species: Xanthomonas oryzae
Genus: Xanthomonas
Family: Xanthomonadaceae
Order: Xanthomonadales
Class: Gammaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 120/240 (50%), Gaps = 19/240 (7%)

Query: 146 TIKSKIAIVVHCYYQDTWIEISHILLRLNFDFDLFVTVVEANKDFEQDVLKYFPS----A 201
           ++ S+ AIV+H ++ D    I   +  +  D+D+FV+V   +    +  ++YF      A
Sbjct: 314 SLSSRFAIVLHLFHIDLIDAICAYMRNVIVDYDVFVSVKSISD--RRMAVRYFQEHKIRA 371

Query: 202 QLYVMENKGRDVRPFLYLLELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLL 261
            +++  N GRDV PF+ LL  G+ DRYD +CK+H KKS    YH   G  WR  L   LL
Sbjct: 372 SVFIHPNIGRDVGPFISLLNTGLLDRYDAVCKVHSKKSV---YHD-GGGQWRDDLMKALL 427

Query: 262 GFSDIAIRIINTFEQNPCLGMIG--SRRYRRYKRWSFFAKRSEVYRRVIDLAKRAGFPTK 319
           G S   +R++  F+ +P  G++G  S      + W    +R  V      LA   G   K
Sbjct: 428 GSSFNVLRVLRAFDDHPACGIVGPESAYLSNARFWGGNEERLRV------LAAETGIEEK 481

Query: 320 RLHLDFFNGTMFWVKPKCLEPLRNLHL-IGEFEEERNLKDGALEHAVERFFACSVRYTEF 378
           R+ L FF GTMFW +P  L  LR   + + EF+ E   +D  L H +ER F   V    F
Sbjct: 482 RIRLGFFAGTMFWFRPAALSALRARSIGLSEFDPEAGQRDATLAHVIERLFVLWVEQAGF 541

Species: Xanthomonas oryzae
Genus: Xanthomonas
Family: Xanthomonadaceae
Order: Xanthomonadales
Class: Gammaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  106 bits (265), Expect = 2e-23
 Identities = 74/231 (32%), Positives = 108/231 (46%), Gaps = 16/231 (6%)

Query: 150 KIAIVVHCYYQDTWIEISHILLRLNFDFDLFVTVVEANKDFE-QDVLKYFP---SAQLYV 205
           KIA+  H YY D   EI      + F +DL +T    +K  E +++L       +A + V
Sbjct: 266 KIAVHAHVYYVDMLDEILTAFKNIPFSYDLIITTDTDDKKAEIEEILAKRKGAKNAIVRV 325

Query: 206 MENKGRDVRPFLYLL-ELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFS 264
           ++N+GRD+ P L  L +  V DRYD +C+ H KKS  +      G  ++  L  +LL   
Sbjct: 326 VQNRGRDMSPLLISLKDELVDDRYDLVCRFHTKKS-PQADFWA-GESFKEELIDNLLKPR 383

Query: 265 DIAIRIINTFEQNPCLGM-IGSRRYRRYKRW--SFFAKRSEVYRRVIDLAKRAGFPTKRL 321
             A  I+  FEQNP +G+ I    + RY     ++     E+      LA+R G   K  
Sbjct: 384 GYADNILAMFEQNPSIGLVIPDIVHIRYPTIGNAWNENAPEM----NKLARRMGIKKKFD 439

Query: 322 HLDFFN--GTMFWVKPKCLEPLRNLHLIGEFEEERNLKDGALEHAVERFFA 370
                   GTMFW +P+ L+ L  L    E      L D +L HA+ER  A
Sbjct: 440 DNTPVASYGTMFWFRPEALKKLFELEWKWEDFPNEPLPDNSLLHAIERLLA 490

This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors. Length = 498

 Score =  128 bits (324), Expect = 2e-30
 Identities = 76/231 (32%), Positives = 105/231 (45%), Gaps = 14/231 (6%)

Query: 148 KSKIAIVVHCYYQDTWIEISHILLRLNFDFDLFVTVVEANKDFE-QDVLKYFPS-AQLYV 205
             KIA+ +H YY D   E   +     F +DL +T    +K  E Q  L   P  A + V
Sbjct: 292 IQKIAVHLHVYYTDLLDEFLALAENTPFPYDLILTTDTPDKVAEIQRALARKPKNAFVRV 351

Query: 206 MENKGRDVRPFLYLLELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSD 265
           +EN+GRD+ P L+LL     DRYD +C++H KKS +       G +WR     +LL    
Sbjct: 352 VENRGRDIGPLLHLLRDLKGDRYDLVCRLHTKKSGQ--ADFWAGELWRHHTIDNLLASRG 409

Query: 266 IAIRIINTFEQNPCLGMIGSRRYRRYK---RWSFFAKRSEVYRRVIDLAKRAGFPTK--R 320
                +  F  NP +G      +R        ++F  R+     V DL +  G   K  R
Sbjct: 410 YVTNALEIFADNPSVGADIPPFFRLNYPTEGIAWFENRAA----VADLLRLMGMNVKTDR 465

Query: 321 LHLDFFNGTMFWVKPKCLEPLRNLHL-IGEFEEERNLKDGALEHAVERFFA 370
                  GTMFW +P+ L PL  L L   +F  E   +DG L HA+ER  A
Sbjct: 466 NTFVAAYGTMFWFRPRALRPLFELELGWNDFPAEPLPQDGHLAHAIERLLA 516

Length = 595

Probab=100.00  E-value=0  Score=519.53  Aligned_cols=228  Identities=30%  Similarity=0.443  Sum_probs=199.9

Q ss_pred             CCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCC-HHHHHHHHHHC---CCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf             0147389999416778999999997089981499971765-28999999711---7873899945666047999986221
Q gi|254780201|r  147 IKSKIAIVVHCYYQDTWIEISHILLRLNFDFDLFVTVVEA-NKDFEQDVLKY---FPSAQLYVMENKGRDVRPFLYLLEL  222 (394)
Q Consensus       147 ~k~kIAVvlHlyY~DLl~E~~~~L~~ip~~~DL~ITt~~~-~~~~~~~~~~~---~~~a~V~vv~NRGRDI~PfL~~~~~  222 (394)
T Consensus       263 ~~~kIav~~HvyY~DLl~e~l~y~~~ip~~~Dl~ITT~~~ek~~~i~~~l~~~~~~~~~~V~vv~NRGRDv~pfLv~~~~  342 (498)
T pfam05045       263 DDQKIAVHAHVYYVDMLDEILTAFKNIPFSYDLIITTDTDDKKAEIEEILAKRKGAKNAIVRVVQNRGRDMSPLLISLKD  342 (498)
T ss_pred             CCCEEEEEEEEECHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHH
T ss_conf             57859999995347269999999982898741899859877899999999856677732899905777417889999887


Q ss_pred             CCC-CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             002-7867899973687767777644407899999987479989999999997609976898168765443323455432
Q gi|254780201|r  223 GVF-DRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFAKRS  301 (394)
Q Consensus       223 ~~l-~~YD~v~klHtKKS~~~~~~~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGlv~p~~~~~~~~~~~~~~~~  301 (394)
T Consensus       343 ~l~~~~YD~v~hiHtKKS~~~~~--~~G~~wr~~l~~nLlgs~~~v~~Il~~F~~~p~lGlv~p~~~~~~~~-~~~~~W~  419 (498)
T pfam05045       343 ELVDDRYDLVCRFHTKKSPQADF--WAGESFKEELIDNLLKPRGYADNILAMFEQNPSIGLVIPDIVHIRYP-TIGNAWN  419 (498)
T ss_pred             HHCCCCCCEEEEEECCCCCCCCC--CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCHHHCCCC-CCCCCCC
T ss_conf             74536774899965574766686--40579999999972198899999999871098636873872312575-4356764


Q ss_pred             CCHHHHHHHHHHCCCCCC--CCCCCCCCEEEEEEEHHHHHHHHCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf             213899999997489988--554773770123320988875765882-23585446888873899999999999998698
Q gi|254780201|r  302 EVYRRVIDLAKRAGFPTK--RLHLDFFNGTMFWVKPKCLEPLRNLHL-IGEFEEERNLKDGALEHAVERFFACSVRYTEF  378 (394)
Q Consensus       302 ~~~~~~~~L~~rlgi~~~--~~~~~FpaGSMFW~R~~AL~pL~~l~l-~~DF~~E~g~~DGTlaHAIERl~~~iv~~~gf  378 (394)
T Consensus       420 ~N~~~~~~L~~~lgl~~~~d~~~~~~p~GTMFW~Rp~AL~~L~~l~l~~~DFpeEp~~-DGTLaHAIERli~yia~~~GY  498 (498)
T pfam05045       420 ENAPEMNKLARRMGIKKKFDDNTPVASYGTMFWFRPEALKKLFELEWKWEDFPNEPLP-DNSLLHAIERLLAYAAWDAGY  498 (498)
T ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHCCC
T ss_conf             5679999999984999877756666676549997189989998379980006646897-428999999999999987539

This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors.

Probab=100.00  E-value=0  Score=377.86  Aligned_cols=238  Identities=29%  Similarity=0.423  Sum_probs=212.4

Q ss_pred             CCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCH--HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCC
Q ss_conf             1473899994167789999999970899814999717652--89999997117873899945666047999986221002
Q gi|254780201|r  148 KSKIAIVVHCYYQDTWIEISHILLRLNFDFDLFVTVVEAN--KDFEQDVLKYFPSAQLYVMENKGRDVRPFLYLLELGVF  225 (394)
Q Consensus       148 k~kIAVvlHlyY~DLl~E~~~~L~~ip~~~DL~ITt~~~~--~~~~~~~~~~~~~a~V~vv~NRGRDI~PfL~~~~~~~l  225 (394)
T Consensus       292 ~~kIav~lHv~ytdll~e~l~laen~~~~ydl~~tt~~p~k~~~i~~~~arkp~~A~v~v~~nrGrd~~pll~~~~~~~~  371 (595)
T COG3754         292 IQKIAVHLHVYYTDLLDEFLALAENTPFPYDLILTTDTPDKVAEIQRALARKPKNAFVRVVENRGRDIGPLLHLLRDLKG  371 (595)
T ss_pred             CEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHCCC
T ss_conf             10268884146403589999998647988651774488156669999854488763687047876300317999875478


Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHH
Q ss_conf             78678999736877677776444078999999874799899999999976099768981687654433234554322138
Q gi|254780201|r  226 DRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFAKRSEVYR  305 (394)
Q Consensus       226 ~~YD~v~klHtKKS~~~~~~~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGlv~p~~~~~~~~~~~~~~~~~~~~  305 (394)
T Consensus       372 d~ydlI~~~htkksgq~~--~~~Ge~~r~~~~~~L~~~~~~v~n~~~~~~~~~~~~~~ip~~f~i~-~~~~~~aw~~~~a  448 (595)
T COG3754         372 DRYDLVCRLHTKKSGQAD--FWAGELWRHHTIDNLLASRGYVTNALEIFADNPSVGADIPPFFRLN-YPTEGIAWFENRA  448 (595)
T ss_pred             CCEEEEEEEEECCCCCCC--CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEEE-CCCCCCHHHHHHH
T ss_conf             753576455421675410--1334268999998762477203236564300554220148705880-3566417988678


Q ss_pred             HHHHHHHHCCCCCCC--CCCCCCCEEEEEEEHHHHHHHHCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             999999974899885--54773770123320988875765882-235854468888738999999999999986980335
Q gi|254780201|r  306 RVIDLAKRAGFPTKR--LHLDFFNGTMFWVKPKCLEPLRNLHL-IGEFEEERNLKDGALEHAVERFFACSVRYTEFSIES  382 (394)
Q Consensus       306 ~~~~L~~rlgi~~~~--~~~~FpaGSMFW~R~~AL~pL~~l~l-~~DF~~E~g~~DGTlaHAIERl~~~iv~~~gf~i~~  382 (394)
T Consensus       449 ~~~dl~~~m~~~~~~d~~T~~~~ygtm~W~r~~aLr~lfe~~l~~~~f~~e~~~~d~~~ahaiEr~l~yva~~~g~~~~~  528 (595)
T COG3754         449 AVADLLRLMGMNVKTDRNTFVAAYGTMFWFRPRALRPLFELELGWNDFPAEPLPQDGHLAHAIERLLAYVAWDAGYAFRH  528 (595)
T ss_pred             HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHC
T ss_conf             99989987077665332321454355543278888888875413645432468877388889999999998310023321


Q ss_pred             EHHHHH
Q ss_conf             247565
Q gi|254780201|r  383 VDCVAE  388 (394)
Q Consensus       383 v~~~~~  388 (394)
T Consensus       529 ~m~a~~  534 (595)
T COG3754         529 VMTAFA  534 (595)
T ss_pred             CCCCCC
T ss_conf             567100

Probab=97.15  E-value=0.022  Score=34.56  Aligned_cols=194  Identities=10%  Similarity=0.145  Sum_probs=102.1

Q ss_pred             CCEEEEEEECCH--HHHHHHHHHHHHCCCC---EEEEEECCCCHHH---HHHHHHHCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf             473899994167--7899999999708998---1499971765289---9999971178738999456660479999862
Q gi|254780201|r  149 SKIAIVVHCYYQ--DTWIEISHILLRLNFD---FDLFVTVVEANKD---FEQDVLKYFPSAQLYVMENKGRDVRPFLYLL  220 (394)
Q Consensus       149 ~kIAVvlHlyY~--DLl~E~~~~L~~ip~~---~DL~ITt~~~~~~---~~~~~~~~~~~a~V~vv~NRGRDI~PfL~~~  220 (394)
T Consensus         1 P~VsViIPayNE~~~~i~~~l~sl~~q~YP~~~~eIiVvdD~std~t~~~~~~~~~~~~~~~~~~~~~~g~Ka~alN~g~   80 (234)
T cd06421           1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEYGYRYLTRPDNRHAKAGNLNNAL   80 (234)
T ss_pred             CEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH
T ss_conf             93999998389978999999999996799998289999989898788988888456643688874889997699999999


Q ss_pred             CCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf             21002786789997368776777764440789999998747998999999999760997689816876544332345543
Q gi|254780201|r  221 ELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFAKR  300 (394)
Q Consensus       221 ~~~~l~~YD~v~klHtKKS~~~~~~~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGlv~p~~~~~~~~~~~~~~~  300 (394)
T Consensus        81 ~---~a~gd~v~~~DaD~----------------------~~~~~~L~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~  135 (234)
T cd06421          81 A---HTTGDFVAILDADH----------------------VPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLAD  135 (234)
T ss_pred             H---HCCCCEEEEECCCC----------------------CCCHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCHHHH
T ss_conf             9---77899999988987----------------------7087699999999986997589953567734883328999


Q ss_pred             -CCCHHH-HHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf             -221389-999999748998855477377012332098887576588223585446888873899999999999998698
Q gi|254780201|r  301 -SEVYRR-VIDLAKRAGFPTKRLHLDFFNGTMFWVKPKCLEPLRNLHLIGEFEEERNLKDGALEHAVERFFACSVRYTEF  378 (394)
Q Consensus       301 -~~~~~~-~~~L~~rlgi~~~~~~~~FpaGSMFW~R~~AL~pL~~l~l~~DF~~E~g~~DGTlaHAIERl~~~iv~~~gf  378 (394)
T Consensus       136 ~~~~~~~~~~~~~~~-~~--~~~~~~~~~G~~~~~rr~~l~~vGg------f~~~------~~~--ED~dl~~rl~~~G~  198 (234)
T cd06421         136 GAPNEQELFYGVIQP-GR--DRWGAAFCCGSGAVVRREALDEIGG------FPTD------SVT--EDLATSLRLHAKGW  198 (234)
T ss_pred             HHHHHHHHHHHHHHH-HH--HCCCCEEECCCHHHHHHHHHHHCCC------CCCC------CCC--HHHHHHHHHHHCCC
T ss_conf             999999999999998-87--3388425535506788999998189------9999------976--59999999997699


Q ss_pred             EEEEEH
Q ss_conf             033524
Q gi|254780201|r  379 SIESVD  384 (394)
Q Consensus       379 ~i~~v~  384 (394)
T Consensus       199 k~~y~p  204 (234)
T cd06421         199 RSVYVP  204 (234)
T ss_pred             EEEEEC
T ss_conf             799936

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

Probab=96.14  E-value=0.11  Score=30.20  Aligned_cols=188  Identities=15%  Similarity=0.145  Sum_probs=98.1

Q ss_pred             EEEECC--HHHHHHHHHHHHHCCCC-EEEEEECCC--CH--HHHHHHHHHC-CCCCEEE-EECCCCHHHHHHHHHHCCCC
Q ss_conf             999416--77899999999708998-149997176--52--8999999711-7873899-94566604799998622100
Q gi|254780201|r  154 VVHCYY--QDTWIEISHILLRLNFD-FDLFVTVVE--AN--KDFEQDVLKY-FPSAQLY-VMENKGRDVRPFLYLLELGV  224 (394)
Q Consensus       154 vlHlyY--~DLl~E~~~~L~~ip~~-~DL~ITt~~--~~--~~~~~~~~~~-~~~a~V~-vv~NRGRDI~PfL~~~~~~~  224 (394)
T Consensus         3 iIPayNE~~~vi~~~l~sl~~~~Yp~~eIiVvdd~stD~t~~~~v~~~~~~~~~~~~~~~~~~~~g~K~~alN~~l~~-~   81 (236)
T cd06435           3 HVPCYEEPPEMVKETLDSLAALDYPNFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPLPGAKAGALNYALER-T   81 (236)
T ss_pred             EEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHH-C
T ss_conf             983589928999999999995799998799998929981589999999987299679999488899709999999996-4


Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCH
Q ss_conf             27867899973687767777644407899999987479989999999997609976898168765443323455432213
Q gi|254780201|r  225 FDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFAKRSEVY  304 (394)
Q Consensus       225 l~~YD~v~klHtKKS~~~~~~~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGlv~p~~~~~~~~~~~~~~~~~~~  304 (394)
T Consensus        82 ~~~~e~i~~~DaD~~---------------------~-~pd~L~~~v~~f~-~p~vg~v~~~~~~~~~~----~~~~~~~  134 (236)
T cd06435          82 APDAEIIAVIDADYQ---------------------V-EPDWLKRLVPIFD-DPRVGFVQAPQDYRDGE----ESLFKRM  134 (236)
T ss_pred             CCCCEEEEEECCCCC---------------------C-CHHHHHHHHHHHC-CCCEEEEECCEECCCCC----CCHHHHH
T ss_conf             798549999768877---------------------7-8689999998604-98768995561314877----6799999


Q ss_pred             HHHH-HHHHHCCCCC-CCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             8999-9999748998-8554773770123320988875765882235854468888738999999999999986980335
Q gi|254780201|r  305 RRVI-DLAKRAGFPT-KRLHLDFFNGTMFWVKPKCLEPLRNLHLIGEFEEERNLKDGALEHAVERFFACSVRYTEFSIES  382 (394)
Q Consensus       305 ~~~~-~L~~rlgi~~-~~~~~~FpaGSMFW~R~~AL~pL~~l~l~~DF~~E~g~~DGTlaHAIERl~~~iv~~~gf~i~~  382 (394)
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGg------f~~~~~~ED~--------dl~~rl~~~G~~~~y  200 (236)
T cd06435         135 CYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALDDVGG------WDEWCITEDS--------ELGLRMHEAGYIGVY  200 (236)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEHHHHHHHCC------CCCCCCCCHH--------HHHHHHHHCCCEEEE
T ss_conf             99999999998898885389747666468878899998389------8877757779--------999999985997997


Q ss_pred             E
Q ss_conf             2
Q gi|254780201|r  383 V  383 (394)
Q Consensus       383 v  383 (394)
T Consensus       201 ~  201 (236)
T cd06435         201 V  201 (236)
T ss_pred             C
T ss_conf             2

NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

Probab=95.77  E-value=0.16  Score=29.20  Aligned_cols=195  Identities=14%  Similarity=0.202  Sum_probs=105.1

Q ss_pred             EEEEEEECCH--HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH--HHCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf             3899994167--7899999999708998149997176528999999--71178738999456660479999862210027
Q gi|254780201|r  151 IAIVVHCYYQ--DTWIEISHILLRLNFDFDLFVTVVEANKDFEQDV--LKYFPSAQLYVMENKGRDVRPFLYLLELGVFD  226 (394)
Q Consensus       151 IAVvlHlyY~--DLl~E~~~~L~~ip~~~DL~ITt~~~~~~~~~~~--~~~~~~a~V~vv~NRGRDI~PfL~~~~~~~l~  226 (394)
T Consensus         2 VsviIPayNE~~~il~~~l~s~~~~~-~~eiivV~D~s~d~~~~~~~~~~~~~~~~v~~~~~~GK~-~Aln~~l~---~a   76 (235)
T cd06434           2 VTVIIPVYDEDPDVFRECLRSILRQK-PLEIIVVTDGDDEPYLSILSQTVKYGGIFVITVPHPGKR-RALAEGIR---HV   76 (235)
T ss_pred             EEEEEEECCCCHHHHHHHHHHHHCCC-CCEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCHH-HHHHHHHH---HC
T ss_conf             79999522697689999999998089-998999988999728999998634897899988989989-99999999---75


Q ss_pred             CCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHH-
Q ss_conf             8678999736877677776444078999999874799899999999976099768981687654433234554322138-
Q gi|254780201|r  227 RYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFAKRSEVYR-  305 (394)
Q Consensus       227 ~YD~v~klHtKKS~~~~~~~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGlv~p~~~~~~~~~~~~~~~~~~~~-  305 (394)
T Consensus        77 ~~d~v~~~DaD~---------------------~~-~~~~l~~l~~~f~-d~~vg~V~~~~~~~-~~~---~~~~~~~~~  129 (235)
T cd06434          77 TTDIVVLLDSDT---------------------VW-PPNALPEMLKPFE-DPKVGGVGTNQRIL-RPR---DSKWSFLAA  129 (235)
T ss_pred             CCCEEEEECCCC---------------------CC-CHHHHHHHHHHHC-CCCEEEEEEEEEEE-CCC---CCHHHHHHH
T ss_conf             778899985885---------------------35-8889999999648-99879997038864-699---989999999


Q ss_pred             ---HHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHHHCCCEEE
Q ss_conf             ---9999999748998855477377012332098887576588223585446888873899999-999999998698033
Q gi|254780201|r  306 ---RVIDLAKRAGFPTKRLHLDFFNGTMFWVKPKCLEPLRNLHLIGEFEEERNLKDGALEHAVE-RFFACSVRYTEFSIE  381 (394)
Q Consensus       306 ---~~~~L~~rlgi~~~~~~~~FpaGSMFW~R~~AL~pL~~l~l~~DF~~E~g~~DGTlaHAIE-Rl~~~iv~~~gf~i~  381 (394)
T Consensus       130 ~~~~~~~~~~~~~~~~-~g~~~~~~G~~~~~Rr~~l~~~~~~---~~~~~~~~~--g~~~~~~ED~~lt~r~~~~G~r~~  203 (235)
T cd06434         130 EYLERRNEEIRAAMSY-DGGVPCLSGRTAAYRTEILKDFLFL---EEFTNETFM--GRRLNAGDDRFLTRYVLSHGYKTV  203 (235)
T ss_pred             HHHHHHHHHHHHHHHH-CCCEEEECCHHHHHHHHHHHHHCCH---HCCCCCCCC--CCCCCCCHHHHHHHHHHHCCCEEE
T ss_conf             9999999999999985-5986896370799999999853301---012300027--777764269999999998699899


Q ss_pred             EE
Q ss_conf             52
Q gi|254780201|r  382 SV  383 (394)
Q Consensus       382 ~v  383 (394)
T Consensus       204 y~  205 (235)
T cd06434         204 YQ  205 (235)
T ss_pred             EE
T ss_conf             92

Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.

Probab=93.91  E-value=0.52  Score=26.12  Aligned_cols=198  Identities=19%  Similarity=0.220  Sum_probs=108.6

Q ss_pred             EEEEEECCHHHHHHHH------HHHHHC--CCCEEEEEECCCCHHHH----H---HHHHHCCC-CCE---EEEECCCCHH
Q ss_conf             8999941677899999------999708--99814999717652899----9---99971178-738---9994566604
Q gi|254780201|r  152 AIVVHCYYQDTWIEIS------HILLRL--NFDFDLFVTVVEANKDF----E---QDVLKYFP-SAQ---LYVMENKGRD  212 (394)
Q Consensus       152 AVvlHlyY~DLl~E~~------~~L~~i--p~~~DL~ITt~~~~~~~----~---~~~~~~~~-~a~---V~vv~NRGRD  212 (394)
T Consensus         2 AvlvP~yNEd~~~v~~~l~a~~~sl~~~~~~~~f~v~vLsDs~~p~~~~~E~~a~~~l~~~~~~~~~v~Yr~R~~n~g~K   81 (254)
T cd04191           2 AIVMPVYNEDPARVFAGLRAMYESLAKTGLADHFDFFILSDTRDPDIWLAEEAAWLDLCEELGAQGRIYYRRRRENTGRK   81 (254)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf             79995688998999999999999998638856537999808997578999999999999984788745988568667987


Q ss_pred             HHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC
Q ss_conf             79999862210027867899973687767777644407899999987479989999999997609976898168765443
Q gi|254780201|r  213 VRPFLYLLELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYRRYK  292 (394)
Q Consensus       213 I~PfL~~~~~~~l~~YD~v~klHtKKS~~~~~~~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGlv~p~~~~~~~  292 (394)
T Consensus        82 AGni~~~l~~-~g~~yd~~~vlDAD~----------------------~~~~d~l~~lv~~~e~dp~~glVQt~~~~~-n  137 (254)
T cd04191          82 AGNIADFCRR-WGSRYDYMVVLDADS----------------------LMSGDTIVRLVRRMEANPRAGIIQTAPKLI-G  137 (254)
T ss_pred             HHHHHHHHHH-CCCCCCEEEEECCCC----------------------CCCHHHHHHHHHHHHHCCCEEEEECCCCCC-C
T ss_conf             3779999995-399846799975888----------------------998699999999997698868972897464-8


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHCC-------CCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             32345543221389999999748-------99885547737701233209888757658822358544688887389999
Q gi|254780201|r  293 RWSFFAKRSEVYRRVIDLAKRAG-------FPTKRLHLDFFNGTMFWVKPKCLEPLRNLHLIGEFEEERNLKDGALEHAV  365 (394)
Q Consensus       293 ~~~~~~~~~~~~~~~~~L~~rlg-------i~~~~~~~~FpaGSMFW~R~~AL~pL~~l~l~~DF~~E~g~~DGTlaHAI  365 (394)
T Consensus       138 ~~s-------~~~r~~qf~~~~~~~~~~~G~~~w~~~~~~f~GhnAIiR~~af~~~~glp~L---~~~g~~~g~~lsED~  207 (254)
T cd04191         138 AET-------LFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCALPVL---PGRPPFGGHILSHDF  207 (254)
T ss_pred             CCC-------HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCCCC---CCCCCCCCCCCCHHH
T ss_conf             878-------8999888999860199875687752553344673146660877764176446---788997886130579


Q ss_pred             HHHHHHHHHHCCCEEEEEHH
Q ss_conf             99999999986980335247
Q gi|254780201|r  366 ERFFACSVRYTEFSIESVDC  385 (394)
Q Consensus       366 ERl~~~iv~~~gf~i~~v~~  385 (394)
T Consensus       208 --~~a~~L~r~Gw~v~~~~~  225 (254)
T cd04191         208 --VEAALMRRAGWEVRLAPD  225 (254)
T ss_pred             --HHHHHHHHCCCEEEEECC
T ss_conf             --999999987998998125

Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.

Probab=91.52  E-value=1.1  Score=24.10  Aligned_cols=160  Identities=13%  Similarity=0.236  Sum_probs=93.1

Q ss_pred             CCEEEEEEECCHHH-HHHHHHHHHHCCCC-EEEEEECC---CCHHHHHHHHHHCCCCCEEEE-ECCCCHH----HHHHHH
Q ss_conf             47389999416778-99999999708998-14999717---652899999971178738999-4566604----799998
Q gi|254780201|r  149 SKIAIVVHCYYQDT-WIEISHILLRLNFD-FDLFVTVV---EANKDFEQDVLKYFPSAQLYV-MENKGRD----VRPFLY  218 (394)
Q Consensus       149 ~kIAVvlHlyY~DL-l~E~~~~L~~ip~~-~DL~ITt~---~~~~~~~~~~~~~~~~a~V~v-v~NRGRD----I~PfL~  218 (394)
T Consensus         1 P~VSIivP~~nee~~i~~~l~sll~qdYp~~Eiivv~d~s~D~t~~i~~~~~~~~p~~~~~~~~~~~~~g~~~K~~~l~~   80 (196)
T cd02520           1 PGVSILKPLCGVDPNLYENLESFFQQDYPKYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVGINPKVNNLIK   80 (196)
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHH
T ss_conf             96799996899927799999999966899808999978999978999999874287766599976888784489999999


Q ss_pred             HHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC
Q ss_conf             62210027867899973687767777644407899999987479989999999997609976898168765443323455
Q gi|254780201|r  219 LLELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFA  298 (394)
Q Consensus       219 ~~~~~~l~~YD~v~klHtKKS~~~~~~~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGlv~p~~~~~~~~~~~~~  298 (394)
T Consensus        81 g~~---~a~gdii~~~DaD~~~----------------------~~~~L~~lv~~f~-~p~vg~V~~~------------  122 (196)
T cd02520          81 GYE---EARYDILVISDSDISV----------------------PPDYLRRMVAPLM-DPGVGLVTCL------------  122 (196)
T ss_pred             HHH---HCCCCEEEEECCCCCC----------------------CHHHHHHHHHHHC-CCCCCEEECC------------
T ss_conf             999---6458999998899772----------------------9559999999856-9994679647------------


Q ss_pred             CCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf             43221389999999748998855477377012332098887576588223585446888873899999999999998698
Q gi|254780201|r  299 KRSEVYRRVIDLAKRAGFPTKRLHLDFFNGTMFWVKPKCLEPLRNLHLIGEFEEERNLKDGALEHAVERFFACSVRYTEF  378 (394)
Q Consensus       299 ~~~~~~~~~~~L~~rlgi~~~~~~~~FpaGSMFW~R~~AL~pL~~l~l~~DF~~E~g~~DGTlaHAIERl~~~iv~~~gf  378 (394)
T Consensus       123 --------------------------~~~G~~~~~Rr~~l~~~Gg~~~~~~~----------l~--ED~~l~~~l~~~G~  164 (196)
T cd02520         123 --------------------------CAFGKSMALRREVLDAIGGFEAFADY----------LA--EDYFLGKLIWRLGY  164 (196)
T ss_pred             --------------------------CCCCCEEEEEHHHHHHCCCHHHHCCC----------CH--HHHHHHHHHHHCCC
T ss_conf             --------------------------76785567889999874994453454----------17--99999999998599


Q ss_pred             EEEEEH
Q ss_conf             033524
Q gi|254780201|r  379 SIESVD  384 (394)
Q Consensus       379 ~i~~v~  384 (394)
T Consensus       165 ri~~~p  170 (196)
T cd02520         165 RVVLSP  170 (196)
T ss_pred             EEEEEC
T ss_conf             799835

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

Probab=91.24  E-value=1.2  Score=23.92  Aligned_cols=187  Identities=10%  Similarity=0.096  Sum_probs=90.3

Q ss_pred             EEEEEEECC-HHHHHHHHHHHHHCC---CCEEEEEECC--C-CHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH-HHCC
Q ss_conf             389999416-778999999997089---9814999717--6-528999999711787389994566604799998-6221
Q gi|254780201|r  151 IAIVVHCYY-QDTWIEISHILLRLN---FDFDLFVTVV--E-ANKDFEQDVLKYFPSAQLYVMENKGRDVRPFLY-LLEL  222 (394)
Q Consensus       151 IAVvlHlyY-~DLl~E~~~~L~~ip---~~~DL~ITt~--~-~~~~~~~~~~~~~~~a~V~vv~NRGRDI~PfL~-~~~~  222 (394)
T Consensus         2 VSViIp~yN~~~~l~~~l~Sl~~q~yp~~~~EVIvVDd~S~D~t~~~~~~~~~~~~~--i~~~~~~~~~~~~a~N~gi--   77 (249)
T cd02525           2 VSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDPR--IRLIDNPKRIQSAGLNIGI--   77 (249)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCC--EEECCCCCCCHHHHHHHHH--
T ss_conf             899993569789999999999846899998899999895961569999999740771--3211355565899998989--


Q ss_pred             CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             00278678999736877677776444078999999874799899999999976099768981687654433234554322
Q gi|254780201|r  223 GVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFAKRSE  302 (394)
Q Consensus       223 ~~l~~YD~v~klHtKKS~~~~~~~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGlv~p~~~~~~~~~~~~~~~~~  302 (394)
T Consensus        78 -~~a~gd~i~~lD~D~~---------------------~-~~~~l~~~~~~~~~~~~~~v~g~~~~~~~~-------~~-  126 (249)
T cd02525          78 -RNSRGDIIIRVDAHAV---------------------Y-PKDYILELVEALKRTGADNVGGPMETIGES-------KF-  126 (249)
T ss_pred             -HHCCCCEEEEECCCCC---------------------C-CHHHHHHHHHHHHCCCCEEEEEEEEECCCC-------HH-
T ss_conf             -9668776884147765---------------------6-956999999998778971999888506897-------27-


Q ss_pred             CHHHHHHHH-HHCCC-----CCCCCCCC-CCC--EEEEEEEHHHHHHHHCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             138999999-97489-----98855477-377--01233209888757658822-3585446888873899999999999
Q gi|254780201|r  303 VYRRVIDLA-KRAGF-----PTKRLHLD-FFN--GTMFWVKPKCLEPLRNLHLI-GEFEEERNLKDGALEHAVERFFACS  372 (394)
Q Consensus       303 ~~~~~~~L~-~rlgi-----~~~~~~~~-Fpa--GSMFW~R~~AL~pL~~l~l~-~DF~~E~g~~DGTlaHAIERl~~~i  372 (394)
T Consensus       127 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--rr~~~~~i---Ggfde~~~-----------~~ED~dl~~R  189 (249)
T cd02525         127 -QKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAY--RREVFEKV---GGFDESLV-----------RNEDAELNYR  189 (249)
T ss_pred             -HHHHHHHHHCCCCCCCCCCCCCCCCCCEECCEEEEEE--EHHHHHHH---CCCCCCCC-----------CCHHHHHHHH
T ss_conf             -7777887626432352000132245845421357988--88899973---89987778-----------2389999999


Q ss_pred             HHHCCCEEEEEHHHHHH
Q ss_conf             99869803352475657
Q gi|254780201|r  373 VRYTEFSIESVDCVAEY  389 (394)
Q Consensus       373 v~~~gf~i~~v~~~~~~  389 (394)
T Consensus       190 ~~~~G~ki~~~p~a~v~  206 (249)
T cd02525         190 LRKAGYKIWLSPDIRVY  206 (249)
T ss_pred             HHHCCCEEEEECCEEEE
T ss_conf             99769979991887999

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

Probab=90.36  E-value=1.4  Score=23.43  Aligned_cols=150  Identities=16%  Similarity=0.212  Sum_probs=86.0

Q ss_pred             HHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHHHHHCCCCCEEEEE-CCCCHHHHHHHHHHCCCCCCCCCEEEEECCC
Q ss_conf             7789999999970899-8149997176528999999711787389994-5666047999986221002786789997368
Q gi|254780201|r  160 QDTWIEISHILLRLNF-DFDLFVTVVEANKDFEQDVLKYFPSAQLYVM-ENKGRDVRPFLYLLELGVFDRYDYLCKIHGK  237 (394)
Q Consensus       160 ~DLl~E~~~~L~~ip~-~~DL~ITt~~~~~~~~~~~~~~~~~a~V~vv-~NRGRDI~PfL~~~~~~~l~~YD~v~klHtK  237 (394)
T Consensus         9 ~~~l~~~l~Sl~~q~~~~~eiivVD~~S~d~t~~~~~~~~~~i~~i~~~~n~G~-~~a~N~g~~---~a~g~~i~~lD~D   84 (166)
T cd04186           9 LEYLKACLDSLLAQTYPDFEVIVVDNASTDGSVELLRELFPEVRLIRNGENLGF-GAGNNQGIR---EAKGDYVLLLNPD   84 (166)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCH-HHHHHHHHH---HHCCCCEEEECCC
T ss_conf             899999999998377998099999689983156777742898899989898776-787616898---7165726998799


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf             77677776444078999999874799899999999976099768981687654433234554322138999999974899
Q gi|254780201|r  238 KSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFAKRSEVYRRVIDLAKRAGFP  317 (394)
Q Consensus       238 KS~~~~~~~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGlv~p~~~~~~~~~~~~~~~~~~~~~~~~L~~rlgi~  317 (394)
T Consensus        85 ~~~----------------------~~~~l~~~~~~~~~~~~~~~~~~~-------------------------------  111 (166)
T cd04186          85 TVV----------------------EPGALLELLDAAEQDPDVGIVGPK-------------------------------  111 (166)
T ss_pred             EEE----------------------CCCHHHHHHHHHHHCCCEEEEEEC-------------------------------
T ss_conf             388----------------------839999999999869798999950-------------------------------


Q ss_pred             CCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHH
Q ss_conf             885547737701233209888757658822358544688887389999999999999869803352475
Q gi|254780201|r  318 TKRLHLDFFNGTMFWVKPKCLEPLRNLHLIGEFEEERNLKDGALEHAVERFFACSVRYTEFSIESVDCV  386 (394)
Q Consensus       318 ~~~~~~~FpaGSMFW~R~~AL~pL~~l~l~~DF~~E~g~~DGTlaHAIERl~~~iv~~~gf~i~~v~~~  386 (394)
T Consensus       112 --------~~g~~~~~rr~~~~~vGgf--de~~~~--~--------~ED~dl~~R~~~~G~~i~~~p~~  160 (166)
T cd04186         112 --------VSGAFLLVRREVFEEVGGF--DEDFFL--Y--------YEDVDLCLRARLAGYRVLYVPQA  160 (166)
T ss_pred             --------CCEEEEEEEHHHHHHHCCC--CHHHCC--C--------CCHHHHHHHHHHCCCCEEEECCE
T ss_conf             --------5489999999999985899--768657--4--------65999999999829949994998

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

Probab=90.20  E-value=1.5  Score=23.35  Aligned_cols=194  Identities=13%  Similarity=0.224  Sum_probs=100.5

Q ss_pred             CCCCHHHHHHCCCCEEEEEEECCH-HHHHHHHHHHHHCCCC---EEEEEECCCCHHHHHHHHHHCC--CCCEEEE-ECCC
Q ss_conf             221011000001473899994167-7899999999708998---1499971765289999997117--8738999-4566
Q gi|254780201|r  137 PSSPKKSGLTIKSKIAIVVHCYYQ-DTWIEISHILLRLNFD---FDLFVTVVEANKDFEQDVLKYF--PSAQLYV-MENK  209 (394)
Q Consensus       137 p~~~~~~~~~~k~kIAVvlHlyY~-DLl~E~~~~L~~ip~~---~DL~ITt~~~~~~~~~~~~~~~--~~a~V~v-v~NR  209 (394)
T Consensus        17 ~~~~~~~~~~~~P~VsViIP~yNE~~~i~~~l~sl~~q~Yp~~~~eVIvvdD~StD~-T~ei~~~~~~~~~~v~~~~~n~   95 (251)
T cd06439          17 PKPPSLPDPAYLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDG-TAEIAREYADKGVKLLRFPERR   95 (251)
T ss_pred             CCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHH-HHHHHHHHHCCCCEEECCCCCC
T ss_conf             899999898899935999973898899999999999669998878999997999814-9999999745585043167776


Q ss_pred             CHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf             60479999862210027867899973687767777644407899999987479989999999997609976898168765
Q gi|254780201|r  210 GRDVRPFLYLLELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYR  289 (394)
Q Consensus       210 GRDI~PfL~~~~~~~l~~YD~v~klHtKKS~~~~~~~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGlv~p~~~~  289 (394)
T Consensus        96 Gk-~~AlN~gi~---~a~gd~i~~lDaD~---------------------~~-~~~~l~~l~~~f-~d~~vg~V~g~~~~  148 (251)
T cd06439          96 GK-AAALNRALA---LATGEIVVFTDANA---------------------LL-DPDALRLLVRHF-ADPSVGAVSGELVI  148 (251)
T ss_pred             CH-HHHHHHHHH---HCCCCEEEECCCCC---------------------CC-CHHHHHHHHHHH-HCCCEEEEEEEEEC
T ss_conf             79-999999998---76789898337876---------------------51-876999999986-09983899714870


Q ss_pred             CCCCCCCCCCCCCCHHH----HHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             44332345543221389----99999974899885547737701233209888757658822358544688887389999
Q gi|254780201|r  290 RYKRWSFFAKRSEVYRR----VIDLAKRAGFPTKRLHLDFFNGTMFWVKPKCLEPLRNLHLIGEFEEERNLKDGALEHAV  365 (394)
Q Consensus       290 ~~~~~~~~~~~~~~~~~----~~~L~~rlgi~~~~~~~~FpaGSMFW~R~~AL~pL~~l~l~~DF~~E~g~~DGTlaHAI  365 (394)
T Consensus       149 ~~~~~~~-~-~~~~y~~~~~~~~~~~s~~~------~~~~~~G~~~~~Rr~~~~~~---------~~~~~------~--E  203 (251)
T cd06439         149 VDGGGSG-S-GEGLYWKYENWLKRAESRLG------STVGANGAIYAIRRELFRPL---------PADTI------N--D  203 (251)
T ss_pred             CCCCCHH-H-HHHHHHHHHHHHHHHHHHCC------CEEEECCHHHHHHHHHHCCC---------CCCCC------C--C
T ss_conf             4898037-8-99999999999999998549------92488668999589998097---------87776------5--3


Q ss_pred             HHHHHHHHHHCCCEEEEE
Q ss_conf             999999999869803352
Q gi|254780201|r  366 ERFFACSVRYTEFSIESV  383 (394)
Q Consensus       366 ERl~~~iv~~~gf~i~~v  383 (394)
T Consensus       204 D~dl~~rl~~~G~ki~y~  221 (251)
T cd06439         204 DFVLPLRIARQGYRVVYE  221 (251)
T ss_pred             HHHHHHHHHHCCCEEEEC
T ss_conf             899999999869979974

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

Probab=99.29  E-value=3.4e-13  Score=100.68  Aligned_cols=289  Identities=11%  Similarity=-0.051  Sum_probs=191.6

Q ss_pred             HCCHHHHHHHHHHHHHCCCCCCCCC-CCCCC-CCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             3324789998878763012211155-32688-740578888789886157568978999999999999999751001585
Q gi|254780201|r   11 LGKIENLLLRLDVEEKGNMQAIYIP-AHVSG-YYVLWSFSPKQRITSKDVHFQELSIFESFIFWLRSFLAFSKYSKLSFP   88 (394)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~y~p-~~~pg-~~~~WDntpR~~~~~~~~~~~tP~~f~~~~~wl~~~l~~~~~~~~~~~   88 (394)
T Consensus       301 v~ytdll~e~l~laen~~~~ydl~~tt~~p~k~~~i~~~~arkp--~~A~v~v~~nrGr-----d~~pll~~~--~~~~-  370 (595)
T COG3754         301 VYYTDLLDEFLALAENTPFPYDLILTTDTPDKVAEIQRALARKP--KNAFVRVVENRGR-----DIGPLLHLL--RDLK-  370 (595)
T ss_pred             CCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCC--CCCEEECCCCCCC-----CCHHHHHHH--HHCC-
T ss_conf             46403589999998647988651774488156669999854488--7636870478763-----003179998--7547-


Q ss_pred             CCEEEEEEEECC--CCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCHHHHHHCCCCEEEEEEECCHHHHHH
Q ss_conf             643999973137--74100732687187559999997302-664202467822101100000147389999416778999
Q gi|254780201|r   89 SCRIFFYGSRKE--QKAFLRLNRFMSNSRMPFDSEKFLYV-KELFEGWNDRPSSPKKSGLTIKSKIAIVVHCYYQDTWIE  165 (394)
Q Consensus        89 ~~~ivfinaWNE--EG~yLePD~~~G~~yL~a~~~al~~~-~~~~~~~~~~p~~~~~~~~~~k~kIAVvlHlyY~DLl~E  165 (394)
T Consensus       371 ~d~ydlI~~~htkksgq~---~~~~Ge~~r~~~~~~L~~~~~~v~n~---~~~~~~~~~~~~~ip~~f~i~-~~~~~~aw  443 (595)
T COG3754         371 GDRYDLVCRLHTKKSGQA---DFWAGELWRHHTIDNLLASRGYVTNA---LEIFADNPSVGADIPPFFRLN-YPTEGIAW  443 (595)
T ss_pred             CCCEEEEEEEEECCCCCC---CCCCCHHHHHHHHHHHHCCCCCHHHH---HHHHHHCCCCCCCCCCEEEEE-CCCCCCHH
T ss_conf             875357645542167541---01334268999998762477203236---564300554220148705880-35664179


Q ss_pred             HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf             99999708998149997176528999999711787389994566604799998622100278678999736877677776
Q gi|254780201|r  166 ISHILLRLNFDFDLFVTVVEANKDFEQDVLKYFPSAQLYVMENKGRDVRPFLYLLELGVFDRYDYLCKIHGKKSQREGYH  245 (394)
Q Consensus       166 ~~~~L~~ip~~~DL~ITt~~~~~~~~~~~~~~~~~a~V~vv~NRGRDI~PfL~~~~~~~l~~YD~v~klHtKKS~~~~~~  245 (394)
T Consensus       444 ~-~~~a~~~dl~~~m~~~~~~-------d~~T~~~~ygtm~W~r~~aLr~lfe~-----~l~~~~f~~e~~~~d~~----  506 (595)
T COG3754         444 F-ENRAAVADLLRLMGMNVKT-------DRNTFVAAYGTMFWFRPRALRPLFEL-----ELGWNDFPAEPLPQDGH----  506 (595)
T ss_pred             H-HHHHHHHHHHHHHCCCCCC-------CCCCHHHHHHHHHHCCHHHHHHHHHH-----HCCHHHHHHCCCCCCHH----
T ss_conf             8-8678999899870776653-------32321454355543278888888875-----41364543246887738----


Q ss_pred             CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             44407899999987479989999999997609976898168765443323455432213899999997489988554773
Q gi|254780201|r  246 PIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFAKRSEVYRRVIDLAKRAGFPTKRLHLDF  325 (394)
Q Consensus       246 ~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGlv~p~~~~~~~~~~~~~~~~~~~~~~~~L~~rlgi~~~~~~~~F  325 (394)
T Consensus       507 ~ahaiEr~l~yva~~~g--~~~~~~m~a~~~~~~~~~l~~~-----------------------~~-~~~~~~~~~--~~  558 (595)
T COG3754         507 LAHAIERLLAYVAWDAG--YAFRHVMTAFAAEPNYDMLEAK-----------------------LQ-RLRSGDPSA--DF  558 (595)
T ss_pred             HHHHHHHHHHHHHHCCH--HHHHCCCCCCCCCCCCCHHHHH-----------------------HH-HHHCCCCCC--CC
T ss_conf             88899999999983100--2332156710047883068887-----------------------77-751589963--31


Q ss_pred             CCEEEEEEEHHHHHHHHCCCCC-CCCCCCCCCCCCHHHH
Q ss_conf             7701233209888757658822-3585446888873899
Q gi|254780201|r  326 FNGTMFWVKPKCLEPLRNLHLI-GEFEEERNLKDGALEH  363 (394)
Q Consensus       326 paGSMFW~R~~AL~pL~~l~l~-~DF~~E~g~~DGTlaH  363 (394)
T Consensus       559 ~~~--~~~~~~vk~~l~~l~~~~~~~~~~~~~~l~~~~~  595 (595)
T COG3754         559 NLR--FWGRTSVKRALRDLIDAIKKSGKERGPILFRKLR  595 (595)
T ss_pred             HHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             233--0440436777778779998751555066665229

Probab=94.23  E-value=0.45  Score=26.51  Aligned_cols=171  Identities=9%  Similarity=0.059  Sum_probs=90.9

Q ss_pred             HHCCCCEEEEEEECCHH--HHHHHHHHHHHCCCCEE---EEEECCCC-----------------HHHHHHHHHHCCCCCE
Q ss_conf             00014738999941677--89999999970899814---99971765-----------------2899999971178738
Q gi|254780201|r  145 LTIKSKIAIVVHCYYQD--TWIEISHILLRLNFDFD---LFVTVVEA-----------------NKDFEQDVLKYFPSAQ  202 (394)
Q Consensus       145 ~~~k~kIAVvlHlyY~D--Ll~E~~~~L~~ip~~~D---L~ITt~~~-----------------~~~~~~~~~~~~~~a~  202 (394)
T Consensus       127 ~~~~PtVDV~IPtYNEp~~vv~~Tl~aa~~ldYP~~kl~V~vLDDG~td~~~~~~~~~~~~~~~rR~e~~~la~~lGv~Y  206 (713)
T TIGR03030       127 PEEWPTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLGVNY  206 (713)
T ss_pred             HHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEE
T ss_conf             10189534896489999899999999998689998546699997989710023430123333441399999999809865


Q ss_pred             EEEECCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf             99945666047999986221002786789997368776777764440789999998747998999999999760997689
Q gi|254780201|r  203 LYVMENKGRDVRPFLYLLELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGM  282 (394)
Q Consensus       203 V~vv~NRGRDI~PfL~~~~~~~l~~YD~v~klHtKKS~~~~~~~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGl  282 (394)
T Consensus       207 itR~~n~hAKAGNLN~AL~--~t-~GelIaVfDAD~----------------------vP~~~FL~~tvg~F~~Dpklal  261 (713)
T TIGR03030       207 ITRPRNVHAKAGNINNALK--HT-DGELILIFDADH----------------------VPTRDFLQRTVGWFVEDPKLFL  261 (713)
T ss_pred             EECCCCCCCCCHHHHHHHH--HC-CCCEEEEECCCC----------------------CCCHHHHHHHHHHHHCCCCEEE
T ss_conf             5379878876167899987--36-987899967887----------------------8668999999898702997699


Q ss_pred             EECCCCCC-CCCCCCCC--CCCCCHHHHHHHHHHCCCCCCC-CCCCCCCEEEEEEEHHHHHHHH
Q ss_conf             81687654-43323455--4322138999999974899885-5477377012332098887576
Q gi|254780201|r  283 IGSRRYRR-YKRWSFFA--KRSEVYRRVIDLAKRAGFPTKR-LHLDFFNGTMFWVKPKCLEPLR  342 (394)
Q Consensus       283 v~p~~~~~-~~~~~~~~--~~~~~~~~~~~L~~rlgi~~~~-~~~~FpaGSMFW~R~~AL~pL~  342 (394)
T Consensus       262 VQTPq~F~N~Dp~~~NL~~~~~~p~e--~~~Fy~~iq~g~d~wnaaf~cGS~aV~RR~AL~eIG  323 (713)
T TIGR03030       262 VQTPHFFVSPDPIERNLGTFRRMPNE--NELFYGLIQDGNDFWNAAFFCGSAAVLRREALDEIG  323 (713)
T ss_pred             EECCEEEECCCHHHHCCHHHCCCCCH--HHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCC
T ss_conf             94897568988787411120367504--778899985564668807982617987499999807

Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.

Probab=93.13  E-value=0.7  Score=25.33  Aligned_cols=154  Identities=14%  Similarity=0.096  Sum_probs=81.0

Q ss_pred             CHHHHHHHHHHHHHCC-CCEEEEEECCCC---HHHHHHHHHHCCCCCEEEE--ECCCCHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf             6778999999997089-981499971765---2899999971178738999--456660479999862210027867899
Q gi|254780201|r  159 YQDTWIEISHILLRLN-FDFDLFVTVVEA---NKDFEQDVLKYFPSAQLYV--MENKGRDVRPFLYLLELGVFDRYDYLC  232 (394)
Q Consensus       159 Y~DLl~E~~~~L~~ip-~~~DL~ITt~~~---~~~~~~~~~~~~~~a~V~v--v~NRGRDI~PfL~~~~~~~l~~YD~v~  232 (394)
T Consensus         8 ~~~~l~~~l~sl~~Q~~~~~eIivvdd~S~d~t~~~~~~~~~~~~~~~~~~~~~~~~g~-~~a~N~g~---~~a~~d~i~   83 (180)
T cd06423           8 EEAVIERTIESLLALDYPKLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKENGGK-AGALNAGL---RHAKGDIVV   83 (180)
T ss_pred             CHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCH-HHHHHHCC---CCCCCCEEE
T ss_conf             78999999999981899981899998999757899999986217971898447776779-99975251---026755798


Q ss_pred             EECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH-HHH
Q ss_conf             9736877677776444078999999874799899999999976099768981687654433234554322138999-999
Q gi|254780201|r  233 KIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFAKRSEVYRRVI-DLA  311 (394)
Q Consensus       233 klHtKKS~~~~~~~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGlv~p~~~~~~~~~~~~~~~~~~~~~~~-~L~  311 (394)
T Consensus        84 ~lD~D~~~----------------------~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~~~~~~~~~~~~~  137 (180)
T cd06423          84 VLDADTIL----------------------EPDALKRLVVPFFADPKVGAVQGRVRVRNGSE----NLLTRLQAIEYLSI  137 (180)
T ss_pred             EECCCCCC----------------------CHHHHHHHHHHHHHCCCEEEEEEEEEEECCCC----CHHHHHHHHHHHHH
T ss_conf             74387200----------------------85699999999987959899985798546998----78999998998877


Q ss_pred             HHCCCCC--CCCCCCCCCEEEEEEEHHHHHHHH
Q ss_conf             9748998--855477377012332098887576
Q gi|254780201|r  312 KRAGFPT--KRLHLDFFNGTMFWVKPKCLEPLR  342 (394)
Q Consensus       312 ~rlgi~~--~~~~~~FpaGSMFW~R~~AL~pL~  342 (394)
T Consensus       138 ~~~~~~~~~~~~~~~~~~G~~~~~rr~~~e~vG  170 (180)
T cd06423         138 FRLGRRAQSALGGVLVLSGAFGAFRREALREVG  170 (180)
T ss_pred             HHHHHHHHHHCCCCEEECCEEEEEEHHHHHHCC
T ss_conf             566666787659950678559998899999839

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the

Probab=91.85  E-value=0.88  Score=24.32  Aligned_cols=123  Identities=11%  Similarity=0.111  Sum_probs=84.1

Q ss_pred             CHHHHHHCCCCEEEEEEEC-CHHHHHHHHHHHHHCC--CCEEEEEECC--C-CHHHHHHHHHHCCCCCEEEEECCCCHHH
Q ss_conf             0110000014738999941-6778999999997089--9814999717--6-5289999997117873899945666047
Q gi|254780201|r  140 PKKSGLTIKSKIAIVVHCY-YQDTWIEISHILLRLN--FDFDLFVTVV--E-ANKDFEQDVLKYFPSAQLYVMENKGRDV  213 (394)
Q Consensus       140 ~~~~~~~~k~kIAVvlHly-Y~DLl~E~~~~L~~ip--~~~DL~ITt~--~-~~~~~~~~~~~~~~~a~V~vv~NRGRDI  213 (394)
                      .........++|+|++=.| -++.+.++++.+.+-.  ..+.++|--+  + ...++..+.....+...+...++.+.=-
T Consensus        26 ~~~~~~~~~p~isViIp~yN~~~~l~~~l~sl~~q~~~~~~eiivvDd~S~D~t~~~~~~~~~~~~~~~~~~~~~~~g~~  105 (295)
T 2z86_A           26 DYPRKQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLC  105 (295)
T ss_dssp             ------CCCCCEEEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHH
T ss_pred             CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCHH
T ss_conf             58766686899899996379989999999999716999985999998989821899999751369969999689985789


Q ss_pred             HHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf             99998622100278678999736877677776444078999999874799899999999976099768981687
Q gi|254780201|r  214 RPFLYLLELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRR  287 (394)
Q Consensus       214 ~PfL~~~~~~~l~~YD~v~klHtKKS~~~~~~~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGlv~p~~  287 (394)
                      ...-.++.   ..+.|+|+.+.+=-..                      .++.+..++..|..+|..+++++..
T Consensus       106 ~~~~~~~~---~a~~d~i~~lD~D~~~----------------------~~~~l~~~~~~~~~~~~~~~~~~~~  154 (295)
T 2z86_A          106 AVRNLGLR---AAKYNYVAILDCDMAP----------------------NPLWVQSYMELLAVDDNVALIGPRK  154 (295)
T ss_dssp             HHHHHHHH---HCCSSEEEEECTTEEE----------------------CTTHHHHHHHHHHHCTTEEEECCEE
T ss_pred             HHHHHHHH---HCCCCEEEEECCCCCC----------------------CHHHHHHHHHHHHHCCCEEEEEEEE
T ss_conf             99999999---7599989998897244----------------------8139999999998499859998777