254780280
glucokinase
GeneID in NCBI database: | 8209262 | Locus tag: | CLIBASIA_00825 |
Protein GI in NCBI database: | 254780280 | Protein Accession: | YP_003064693.1 |
Gene range: | -(166467, 167513) | Protein Length: | 348aa |
Gene description: | glucokinase | ||
COG prediction: | none | ||
KEGG prediction: | glk; glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] | ||
SEED prediction: | Glucokinase (EC 2.7.1.2) | ||
Pathway involved in KEGG: | Glycolysis / Gluconeogenesis [PATH:las00010]
Galactose metabolism [PATH:las00052] Starch and sucrose metabolism [PATH:las00500] Amino sugar and nucleotide sugar metabolism [PATH:las00520] Streptomycin biosynthesis [PATH:las00521] Butirosin and neomycin biosynthesis | ||
Subsystem involved in SEED: | - none - | ||
sequence | sequence profile |
Prediction of Local Sequence Properties
Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
No hits with e-value below 0.05
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
Identity | Alignment graph | Length | Definition | Round | E-value |
Target | 348 | glucokinase [Candidatus Liberibacter asiaticus str. psy | |||
315122840 | 363 | glucokinase [Candidatus Liberibacter solanacearum CLso- | 1 | 1e-149 | |
325291625 | 344 | Glucokinase [Agrobacterium sp. H13-3] Length = 344 | 1 | 2e-88 | |
159184201 | 340 | glucokinase [Agrobacterium tumefaciens str. C58] Length | 1 | 2e-86 | |
163757717 | 341 | putative glucokinase [Hoeflea phototrophica DFL-43] Len | 1 | 2e-86 | |
153008663 | 346 | glucokinase [Ochrobactrum anthropi ATCC 49188] Length = | 1 | 1e-85 | |
110635920 | 342 | glucokinase [Mesorhizobium sp. BNC1] Length = 342 | 1 | 1e-85 | |
260167799 | 343 | glucokinase [Brucella sp. F5/99] Length = 343 | 1 | 3e-85 | |
225629498 | 348 | glucokinase [Brucella ceti str. Cudo] Length = 348 | 1 | 3e-85 | |
86355832 | 341 | glucokinase [Rhizobium etli CFN 42] Length = 341 | 1 | 5e-85 | |
306840212 | 343 | glucokinase [Brucella sp. BO2] Length = 343 | 1 | 5e-85 |
>gi|315122840|ref|YP_004063329.1| glucokinase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 363 | Back alignment and organism information |
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Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 261/345 (75%), Positives = 297/345 (86%), Gaps = 2/345 (0%) Query: 3 NISKKDFPIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRK 62 N+S ++FP AFPVLLADIGGTNVRFAILR MESE E C TV+T+DYE+LEHAIQEVI K Sbjct: 20 NMSNRNFPTAFPVLLADIGGTNVRFAILRDMESEIECCGTVKTADYESLEHAIQEVILSK 79 Query: 63 ISIRLRSAFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICS 122 ISIRLRSAFLA+AT IGDQK F LTNY W+IDPE LIS+M FEDVLLINDFEAQALA+C Sbjct: 80 ISIRLRSAFLALATSIGDQKKFMLTNYQWIIDPEALISQMNFEDVLLINDFEAQALAVCF 139 Query: 123 LSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPST 182 LS S+YVS+G ++ N FSSRVIVGPGTGLG+S VIR K+SWIPIS EGGHM+IGPS+ Sbjct: 140 LSDSHYVSVGPDIKRNNCSFSSRVIVGPGTGLGVSGVIRLKNSWIPISGEGGHMNIGPSS 199 Query: 183 QRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSEDP 242 +RD+EIFP+L E RLSAE LLSG+GLVNIYKA+C ADGFE+ LS++DIV + P Sbjct: 200 KRDFEIFPYLIENE--RLSAEMLLSGRGLVNIYKAICKADGFENETSLSAQDIVCQEAHP 257 Query: 243 IALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHK 302 IAL+AINLFC+YLGR+AGDLALIFM+RGGVYISGGIP KII LLRNSSFR SFENK+PHK Sbjct: 258 IALEAINLFCDYLGRIAGDLALIFMSRGGVYISGGIPNKIIHLLRNSSFRASFENKAPHK 317 Query: 303 ELMRQIPTYVITNPYIAIAGMVSYIKMTDCFNLFISEGIKRRWFK 347 ELMR+IPTYVITNPYIAI+GM+SYIKMTD FNL EGI+ RW K Sbjct: 318 ELMRKIPTYVITNPYIAISGMLSYIKMTDNFNLITDEGIRSRWIK 362 |
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|325291625|ref|YP_004277489.1| Glucokinase [Agrobacterium sp. H13-3] Length = 344 | Back alignment and organism information |
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Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 162/340 (47%), Positives = 236/340 (69%), Gaps = 16/340 (4%) Query: 11 IAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSA 70 ++FP+LL DIGGTN RF+IL +EP TV+T++Y ++ AIQ+ + K S++ S Sbjct: 14 LSFPILLGDIGGTNARFSILIDSFAEPVHLTTVKTAEYPTIDDAIQQAVLDKTSLQPVST 73 Query: 71 FLAIATPI-GDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYV 129 LAIA PI GD+ LTN HWV+ P+++++++ +DV++INDFEAQALAI +L N Sbjct: 74 ILAIAGPIEGDE--IPLTNCHWVVKPKDMLAKLGLKDVIVINDFEAQALAIAALDDDNRD 131 Query: 130 SIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIF 189 SIG +D + +SRV++GPGTGLG++ ++ A+ W P+ EGGH+DIGP + RDY +F Sbjct: 132 SIGSGKKD---MLASRVVLGPGTGLGVAGLVYARHMWFPVPGEGGHIDIGPRSARDYAVF 188 Query: 190 PHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSK-DIVSKS---EDPIAL 245 PH+ E EGR++ E +L G+GLVN+Y+A+C ADG E + S DI S+ ++P A Sbjct: 189 PHI-ETIEGRIAGEQILCGRGLVNLYRAICTADGIE--PIFSDPADITSQGLSGQNPQAK 245 Query: 246 KAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELM 305 + ++LF YLGRVAGDLALIFMA+GGVY++GGI KI+ L++ FR +FE+K+PH LM Sbjct: 246 ETLSLFSTYLGRVAGDLALIFMAKGGVYLAGGISQKIVPALKSPEFRAAFEDKAPHSALM 305 Query: 306 RQIPTYVITNPYIAIAGMVSYIKMTDCFNLFISEGIKRRW 345 R IPT+V+T+P A++G+ +Y + F L + RRW Sbjct: 306 RSIPTFVVTHPQAALSGLATYARTPSDFGLSLD---GRRW 342 |
Species: Agrobacterium sp. H13-3 Genus: Agrobacterium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|159184201|ref|NP_353219.2| glucokinase [Agrobacterium tumefaciens str. C58] Length = 340 | Back alignment and organism information |
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Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 164/350 (46%), Positives = 238/350 (68%), Gaps = 17/350 (4%) Query: 1 MNNISKKDFPIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIY 60 M S ++ ++FP+LL DIGGTN RF+IL +EP TV+T++Y ++ AIQ+ + Sbjct: 1 MPKTSDTEY-LSFPILLGDIGGTNARFSILIDSFAEPVHLTTVKTAEYPGIDDAIQQAVL 59 Query: 61 RKISIRLRSAFLAIATPI-GDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALA 119 K S++ S LAIA PI GD+ LTN HWV+ P+++++++ +DV++INDFEAQALA Sbjct: 60 DKTSLQPVSTILAIAGPIEGDE--IPLTNCHWVVKPKDMLAKLGLKDVIVINDFEAQALA 117 Query: 120 ICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIG 179 I +L N IG +D + +SRV++GPGTGLG++ ++ A+ W P+ EGGH+DIG Sbjct: 118 IAALDDDNREPIGSGKKD---MLASRVVLGPGTGLGVAGLVYARHMWFPVPGEGGHIDIG 174 Query: 180 PSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSK-DIVSK 238 P + RDY +FPH+ E EGR++ E +L G+GLVN+Y+A+C ADG E V S DI S+ Sbjct: 175 PRSARDYVVFPHI-ETIEGRVAGEQILCGRGLVNLYRAICKADGIEP--VFSDPADITSQ 231 Query: 239 S---EDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESF 295 ++ A + ++LF YLGRVAGDLALIFMA+GGVY++GGI KII L++ FR +F Sbjct: 232 GLSGQNAQAKETLSLFSTYLGRVAGDLALIFMAKGGVYLAGGISQKIIPALKSPEFRAAF 291 Query: 296 ENKSPHKELMRQIPTYVITNPYIAIAGMVSYIKMTDCFNLFISEGIKRRW 345 E+K+PH LMR IPT+V+T+P A++G+ +Y + F L + RRW Sbjct: 292 EDKAPHSALMRTIPTFVVTHPQAALSGLATYARTPADFGLALD---GRRW 338 |
Species: Agrobacterium tumefaciens Genus: Agrobacterium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|163757717|ref|ZP_02164806.1| putative glucokinase [Hoeflea phototrophica DFL-43] Length = 341 | Back alignment and organism information |
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Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 167/337 (49%), Positives = 222/337 (65%), Gaps = 7/337 (2%) Query: 1 MNNISKKDFPIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIY 60 M N S D IAFP+L+ DIGGTN RFAIL +EP+ + T+D+E ++ AIQ + Sbjct: 1 MPNPSDSDHTIAFPILIGDIGGTNARFAILTDAYAEPKEFPVLATADFETIDLAIQTGVL 60 Query: 61 RKISIRLRSAFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAI 120 K S++ RSA LA+A PI D + LTN WVI PE LI + FEDV++INDFEAQALA Sbjct: 61 DKTSLQPRSAILAVAGPIKDNE-IDLTNCDWVIKPEALIRELGFEDVIVINDFEAQALAA 119 Query: 121 CSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGP 180 SL + +G SSRV+VGPGTGLG++ ++ A+ +W P+ EGGH+DIGP Sbjct: 120 ASLGQEHLEKVGG---GEVRPASSRVVVGPGTGLGVAGLVHARHTWFPVPGEGGHVDIGP 176 Query: 181 STQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIV--SK 238 T RD E+FP L + GR+SAE LL G+GL+NIY+A+C A + + ++ S Sbjct: 177 RTPRDLELFP-LYDTIGGRVSAEQLLCGRGLMNIYRAVCKAGKIKESATSPAEVTAAWSA 235 Query: 239 SEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENK 298 DP A++AI LF YLGRVAGDLALIFMARGGVY++GGI KII L FRE+FE+K Sbjct: 236 GSDPAAVEAIELFVTYLGRVAGDLALIFMARGGVYLAGGIVQKIIPALNQPRFREAFEDK 295 Query: 299 SPHKELMRQIPTYVITNPYIAIAGMVSYIKMTDCFNL 335 +PH E++ IPT+VIT+P A+ G+ +Y + F + Sbjct: 296 APHNEILENIPTFVITHPLAALHGLAAYARTPVRFGV 332 |
Species: Hoeflea phototrophica Genus: Hoeflea Family: Phyllobacteriaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|153008663|ref|YP_001369878.1| glucokinase [Ochrobactrum anthropi ATCC 49188] Length = 346 | Back alignment and organism information |
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Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 160/336 (47%), Positives = 229/336 (68%), Gaps = 12/336 (3%) Query: 13 FPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFL 72 FPVL+ DIGGTN RFAIL +EP+ +QT+DY ++ AIQ I SIR RSA L Sbjct: 16 FPVLVGDIGGTNARFAILVDSNAEPKEFPVLQTADYATIDEAIQSAILDHTSIRPRSAIL 75 Query: 73 AIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIG 132 A+A P+ D LTN WV+ P+++I+ + FEDV ++NDFEAQALA+ SL + IG Sbjct: 76 AVAGPV-DGDEIDLTNCDWVVRPKKMIADLGFEDVTVLNDFEAQALAVVSLGSDHLEQIG 134 Query: 133 QFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFPHL 192 E+ + ++RV++GPGTGLG++ ++R + +W+P+ EGGH+DIGP T+RDY++FPH+ Sbjct: 135 GKPEE---VIATRVVLGPGTGLGVAGLVRTRHAWVPVPGEGGHIDIGPRTERDYQVFPHI 191 Query: 193 TERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSED---PIALKAIN 249 ER +GR++ E +L G+GL N+Y A+C AD + + + DI S D A + ++ Sbjct: 192 -ERIDGRVAGEQILCGRGLRNLYLAICAADKV-TPTLETPADITSAGLDGSNAQAEETLH 249 Query: 250 LFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIP 309 LF YLGRVAGDLALIFMA GGVY+SGGIP +I+ L++ +FRE+FE+K+PHK +MR IP Sbjct: 250 LFVTYLGRVAGDLALIFMAHGGVYLSGGIPQRILSALKSGAFREAFEDKAPHKAIMRDIP 309 Query: 310 TYVITNPYIAIAGMVSYIKMTDCFNLFISEGIKRRW 345 VIT+ A+ G+ ++ + F + +EG RRW Sbjct: 310 VRVITHQLAALTGLSAFAQAPARFEVS-TEG--RRW 342 |
Species: Ochrobactrum anthropi Genus: Ochrobactrum Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|110635920|ref|YP_676128.1| glucokinase [Mesorhizobium sp. BNC1] Length = 342 | Back alignment and organism information |
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Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 160/345 (46%), Positives = 228/345 (66%), Gaps = 14/345 (4%) Query: 5 SKKDFPIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKIS 64 + D + FP+L+ DIGGTN RFAI+ +EP VQT+D+ +E AIQ I + Sbjct: 5 TDHDVVLDFPILIGDIGGTNARFAIVVDSYAEPREFPVVQTADFATIEDAIQTAILDQTH 64 Query: 65 IRLRSAFLAIATPI-GDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSL 123 + RSA LA+A P+ GD+ LTN +WV+ P E+++ + F D++++NDFEAQALA+ +L Sbjct: 65 LIPRSAVLAVAGPVNGDE--IDLTNSNWVVRPREMMAHLGFSDIVVLNDFEAQALAVVAL 122 Query: 124 SCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQ 183 + IG V + SRV++GPGTGLG++ ++ A+ +WIP+ EGGHMD+GP T Sbjct: 123 GEEHLEKIGGNVAET---VGSRVVLGPGTGLGVAGLVHARRTWIPVPGEGGHMDLGPRTA 179 Query: 184 RDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKS---E 240 RD +IFPHL ER EGR+S E +L G+GLVN+Y+A+ AD E+ S +I + Sbjct: 180 RDEQIFPHL-ERIEGRVSGEQVLCGRGLVNLYRAIAKADAKEA-AFSSPAEITTAGLAQA 237 Query: 241 DPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSP 300 D IA++ +NLF YLGRVAGDL L+FM+RGGV+++GGI KI+ L+NS FR +FE+K+P Sbjct: 238 DEIAVETLNLFVTYLGRVAGDLGLVFMSRGGVFLTGGIAQKIVPALKNSLFRAAFEDKAP 297 Query: 301 HKELMRQIPTYVITNPYIAIAGMVSYIKMTDCFNLFISEGIKRRW 345 H ELM +P YVIT+P A+ G+ +Y + F + E RRW Sbjct: 298 HNELMASMPVYVITHPLAALHGLAAYARTPARFGV---ETAGRRW 339 |
Species: Chelativorans sp. BNC1 Genus: Chelativorans Family: Phyllobacteriaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|260167799|ref|ZP_05754610.1| glucokinase [Brucella sp. F5/99] Length = 343 | Back alignment and organism information |
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Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 160/348 (45%), Positives = 229/348 (65%), Gaps = 12/348 (3%) Query: 1 MNNISKKDFPIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIY 60 M I + FPVL+ DIGGTN RF+IL +EP+ +QT+DY ++ AIQ I Sbjct: 1 MQAIIDAEQSFKFPVLVGDIGGTNARFSILVDSNAEPKVFPVLQTADYATIDEAIQHAIL 60 Query: 61 RKISIRLRSAFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAI 120 + +I+ RS LA+A P+ D LTN WV+ P+++I+ + FEDV ++NDFEAQALA+ Sbjct: 61 DQTAIQPRSVILAVAGPV-DGDEIDLTNCDWVVRPKKMIADLGFEDVTVLNDFEAQALAV 119 Query: 121 CSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGP 180 SL + IG E+ ++RV++GPGTGLG++ ++R + +W+P+ EGGH+DIGP Sbjct: 120 VSLEGHHMEQIGGKPEEA---VATRVVLGPGTGLGVAGLVRTRHAWVPVPGEGGHIDIGP 176 Query: 181 STQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSE 240 T+RDY+IFPH+ ER EGR++ E +LSG+GL N+Y +C AD + + + DI S Sbjct: 177 RTERDYQIFPHI-ERIEGRVTGEQILSGRGLRNLYLGICAADKI-TPTLETPVDITSAGL 234 Query: 241 D---PIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFEN 297 D P A + ++LF YLGR+AGDLALIFMA GGVY+SGGIP +I+ L+ SFR +FE+ Sbjct: 235 DGSNPQAAETLDLFATYLGRLAGDLALIFMAHGGVYLSGGIPVRILSALKAGSFRAAFED 294 Query: 298 KSPHKELMRQIPTYVITNPYIAIAGMVSYIKMTDCFNLFISEGIKRRW 345 K+PHK +MR IP VIT A+ G+ ++ + F + +EG RRW Sbjct: 295 KAPHKAIMRDIPVRVITYQLAALTGLSAFARTPSRFEVS-TEG--RRW 339 |
Species: Brucella sp. F5/99 Genus: Brucella Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|225629498|ref|ZP_03787531.1| glucokinase [Brucella ceti str. Cudo] Length = 348 | Back alignment and organism information |
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Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 160/348 (45%), Positives = 229/348 (65%), Gaps = 12/348 (3%) Query: 1 MNNISKKDFPIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIY 60 M I + FPVL+ DIGGTN RF+IL +EP+ +QT+DY ++ AIQ I Sbjct: 6 MQAIIDAEQSFKFPVLVGDIGGTNARFSILVDSNAEPKVFPVLQTADYATIDEAIQHAIL 65 Query: 61 RKISIRLRSAFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAI 120 + +I+ RS LA+A P+ D LTN WV+ P+++I+ + FEDV ++NDFEAQALA+ Sbjct: 66 DQTAIQPRSVILAVAGPV-DGDEIDLTNCDWVVRPKKMIADLGFEDVTVLNDFEAQALAV 124 Query: 121 CSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGP 180 SL + IG E+ ++RV++GPGTGLG++ ++R + +W+P+ EGGH+DIGP Sbjct: 125 VSLEGHHMEQIGGKPEEA---VATRVVLGPGTGLGVAGLVRTRHAWVPVPGEGGHIDIGP 181 Query: 181 STQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSE 240 T+RDY+IFPH+ ER EGR++ E +LSG+GL N+Y +C AD + + + DI S Sbjct: 182 RTERDYQIFPHI-ERIEGRVTGEQILSGRGLRNLYLGICAADKI-TPTLETPVDITSAGL 239 Query: 241 D---PIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFEN 297 D P A + ++LF YLGR+AGDLALIFMA GGVY+SGGIP +I+ L+ SFR +FE+ Sbjct: 240 DGSNPQAAETLDLFATYLGRLAGDLALIFMAHGGVYLSGGIPVRILSALKAGSFRAAFED 299 Query: 298 KSPHKELMRQIPTYVITNPYIAIAGMVSYIKMTDCFNLFISEGIKRRW 345 K+PHK +MR IP VIT A+ G+ ++ + F + +EG RRW Sbjct: 300 KAPHKAIMRDIPVRVITYQLAALTGLSAFARTPSRFEVS-TEG--RRW 344 |
Species: Brucella ceti Genus: Brucella Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|86355832|ref|YP_467724.1| glucokinase [Rhizobium etli CFN 42] Length = 341 | Back alignment and organism information |
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Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 166/341 (48%), Positives = 238/341 (69%), Gaps = 12/341 (3%) Query: 10 PIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRS 69 P+ FP+L+ DIGGTN RF+IL +EP+ V+T+D+ ++ AIQ+ + K +++ RS Sbjct: 10 PLPFPILIGDIGGTNARFSILTDAYAEPKQFPNVRTADFATIDEAIQKGVLDKTAVQPRS 69 Query: 70 AFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYV 129 A LA+A PI D + LTN WV+ P+ +I + EDVL++NDFEAQALAI +LS N Sbjct: 70 AILAVAGPINDDE-IPLTNCAWVVRPKTMIEGLGIEDVLVVNDFEAQALAIAALSDENRE 128 Query: 130 SIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIF 189 IG D + +SRV++GPGTGLG+ ++ A+ +WIP+ EGGH+D+GP ++RDYEIF Sbjct: 129 RIGSATGD---MVASRVVLGPGTGLGVGGLVHAQHTWIPVPGEGGHIDLGPRSKRDYEIF 185 Query: 190 PHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKS---EDPIALK 246 PH+ E EGR+SAE +L G+GLVN+Y A+C+ DG + + DI S + D +A++ Sbjct: 186 PHI-ETIEGRVSAEQILCGRGLVNLYNAICVVDGIQPT-MKDPADITSHALDGSDKVAVE 243 Query: 247 AINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMR 306 ++LF YLGRVAGD+A++FMARGGVY+SGGI KII L+ FR++FE+K+PH L+R Sbjct: 244 TVSLFATYLGRVAGDMAMVFMARGGVYLSGGISQKIIPALKKPEFRQAFEDKAPHSALLR 303 Query: 307 QIPTYVITNPYIAIAGMVSYIKMTDCFNLFISEGIKRRWFK 347 IPTYV+T+P A+AG+ SY +M F + +EG RRW + Sbjct: 304 TIPTYVVTHPLAALAGLSSYARMPANFGVS-TEG--RRWRR 341 |
Species: Rhizobium etli Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|306840212|ref|ZP_07472987.1| glucokinase [Brucella sp. BO2] Length = 343 | Back alignment and organism information |
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Score = 318 bits (816), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 161/348 (46%), Positives = 229/348 (65%), Gaps = 12/348 (3%) Query: 1 MNNISKKDFPIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIY 60 M I + FPVL+ DIGGTN RFAIL +EP+ +QT+DY ++ AIQ I Sbjct: 1 MQAIIDAEQSFKFPVLVCDIGGTNARFAILVDSNAEPKEFPVLQTADYATIDEAIQRAIL 60 Query: 61 RKISIRLRSAFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAI 120 + +I+ RS LA+A P+ D LTN WV+ P+++I+ + FEDV ++NDFEAQALA+ Sbjct: 61 DQTAIQPRSVILAVAGPV-DGDEIDLTNCDWVVRPKKMIADLGFEDVTVLNDFEAQALAV 119 Query: 121 CSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGP 180 SL + IG E+ ++RV++GPGTGLG++ ++R + +W+P+ EGGH+DIGP Sbjct: 120 VSLEGHHMEQIGGKPEEA---VATRVVLGPGTGLGVAGLVRTRHAWVPVPGEGGHIDIGP 176 Query: 181 STQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSE 240 T+RDY+IFPH+ ER EGR++ E +LSG+GL N+Y +C AD + + + DI S Sbjct: 177 RTERDYQIFPHI-ERIEGRVTGEQILSGRGLRNLYLGICAADKI-TPTLETPVDITSAGL 234 Query: 241 D---PIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFEN 297 D P A + ++LF YLGR+AGDLALIFMA GGVY+SGGIP +I+ L+ SFR +FE+ Sbjct: 235 DGSNPQAAETLDLFATYLGRLAGDLALIFMAHGGVYLSGGIPVRILSALKTGSFRAAFED 294 Query: 298 KSPHKELMRQIPTYVITNPYIAIAGMVSYIKMTDCFNLFISEGIKRRW 345 K+PHK +MR IP VIT A+ G+ ++ + F + +EG RRW Sbjct: 295 KAPHKAIMRDIPVRVITYQLAALTGLSAFARTPSRFEVS-TEG--RRW 339 |
Species: Brucella sp. BO2 Genus: Brucella Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
Identity | Alignment graph | Length | Definition | E-value |
Target | 348 | glucokinase [Candidatus Liberibacter asiaticus str. psy | ||
PRK00292 | 316 | PRK00292, glk, glucokinase; Provisional | 1e-121 | |
COG0837 | 320 | COG0837, Glk, Glucokinase [Carbohydrate transport and m | 2e-91 | |
PRK14101 | 638 | PRK14101, PRK14101, bifunctional glucokinase/RpiR famil | 6e-54 | |
TIGR00749 | 316 | TIGR00749, glk, glucokinase, proteobacterial type | 4e-53 | |
PRK12408 | 336 | PRK12408, PRK12408, glucokinase; Provisional | 3e-43 | |
PTZ00288 | 405 | PTZ00288, PTZ00288, glucokinase 1; Provisional | 5e-07 | |
pfam02685 | 316 | pfam02685, Glucokinase, Glucokinase | 8e-94 | |
COG1940 | 314 | COG1940, NagC, Transcriptional regulator/sugar kinase [ | 2e-06 |
>gnl|CDD|178964 PRK00292, glk, glucokinase; Provisional | Back alignment and domain information |
---|
Score = 431 bits (1110), Expect = e-121 Identities = 124/321 (38%), Positives = 184/321 (57%), Gaps = 9/321 (2%) Query: 13 FPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFL 72 P L+ DIGGTN RFA+ E E T T+DY +LE AI+ + + +++RSA Sbjct: 2 KPALVGDIGGTNARFALCDWANGEIEQIKTYATADYPSLEDAIRAYLADEHGVQVRSACF 61 Query: 73 AIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIG 132 AIA P+ + +TN+HW + + + +LLINDF AQALAI L + V IG Sbjct: 62 AIAGPVDGDE-VRMTNHHWAFSIAAMKQELGLDHLLLINDFTAQALAIPRLGEEDLVQIG 120 Query: 133 QFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFPHL 192 + ++GPGTGLG++ ++ WI + EGGH+D P ++ + +I +L Sbjct: 121 GGEPVP---GAPIAVIGPGTGLGVAGLVPVDGRWIVLPGEGGHVDFAPRSEEEAQILQYL 177 Query: 193 TERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKS---EDPIALKAIN 249 G +SAE +LSG GLVN+Y+A+C ADG E +L+ DI ++ P+ + ++ Sbjct: 178 -RAEFGHVSAERVLSGPGLVNLYRAICKADGREPE-LLTPADITERALAGSCPLCRRTLS 235 Query: 250 LFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIP 309 LFC LGRVAG+LAL ARGGVYI+GGI + ++ + S FR +FE+K + IP Sbjct: 236 LFCVILGRVAGNLALTLGARGGVYIAGGIVPRFLEFFKASGFRAAFEDKGRFSAYLADIP 295 Query: 310 TYVITNPYIAIAGMVSYIKMT 330 YVIT+P + G +Y++ Sbjct: 296 VYVITHPQPGLLGAGAYLRQA 316 |
Length = 316 |
>gnl|CDD|31179 COG0837, Glk, Glucokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
---|
Score = 331 bits (851), Expect = 2e-91 Identities = 131/323 (40%), Positives = 188/323 (58%), Gaps = 11/323 (3%) Query: 8 DFPIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRL 67 + +P L+ DIGGTN RFA++ +EP T +DY +LE A+Q+ + ++ Sbjct: 1 MKAMGYPRLVGDIGGTNARFALVEIAPAEPLQAETYACADYPSLEEAVQDYLSEHTAVAP 60 Query: 68 RSAFLAIATPI-GDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCS 126 RSA AIA PI GD+ LTN+ WV + + + + + LINDF AQALAI L Sbjct: 61 RSACFAIAGPIDGDE--VRLTNHDWVFSIARMRAELGLDHLSLINDFAAQALAIPRLGAE 118 Query: 127 NYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDY 186 + IG + R ++GPGTGLG++ ++ WIP+ EGGH+D P ++R++ Sbjct: 119 DLEQIG---GGKPEPNAPRAVLGPGTGLGVAGLVPNGGGWIPLPGEGGHVDFAPRSEREF 175 Query: 187 EIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKS---EDPI 243 +I +L R GR+SAE +LSG GLVN+Y+ALC ADG L+ I ++ D + Sbjct: 176 QILEYLRAR-FGRVSAERVLSGPGLVNLYRALCAADGRLPED-LTPAAITERALAGGDAL 233 Query: 244 ALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKE 303 A + ++LFC LGRVAGDLAL ARGGVYI+GGI +I++ L+ S FR FE+K Sbjct: 234 ARETLSLFCAILGRVAGDLALTLGARGGVYIAGGIVPRILEALKASGFRARFEDKGRMSA 293 Query: 304 LMRQIPTYVITNPYIAIAGMVSY 326 + IP YVI +P + G + Sbjct: 294 YLADIPVYVILHPQPGLLGAAAA 316 |
Length = 320 |
>gnl|CDD|184507 PRK14101, PRK14101, bifunctional glucokinase/RpiR family transcriptional regulator; Provisional | Back alignment and domain information |
---|
Score = 206 bits (526), Expect = 6e-54 Identities = 112/320 (35%), Positives = 171/320 (53%), Gaps = 16/320 (5%) Query: 14 PVLLADIGGTNVRFAILRSMESEPEFCCTVQT---SDYENLEHAIQEVIYRKISIRLRSA 70 P LLAD+GGTN RFA +E+ P ++ +DY L AI++ + R+ A Sbjct: 19 PRLLADVGGTNARFA----LETGPGEITQIRVYPGADYPTLTDAIRKYLKDVKIGRVNHA 74 Query: 71 FLAIATPI-GDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYV 129 +AIA P+ GDQ +TN+ W E + F+ +L++NDF A A+A+ L+ + V Sbjct: 75 AIAIANPVDGDQ--VRMTNHDWSFSIEATRRALGFDTLLVVNDFTALAMALPGLTDAQRV 132 Query: 130 SIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIF 189 +G S+ ++GPGTGLG+S +I A D WI + EGGH P +R+ ++ Sbjct: 133 QVGGGTRRQNSVIG---LLGPGTGLGVSGLIPADDRWIALGSEGGHASFAPQDERE-DLV 188 Query: 190 PHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSE--DPIALKA 247 + +S E + +G G+ IY+AL D + + +IV ++ D +AL+A Sbjct: 189 LQYARKKYPHVSFERVCAGPGMEIIYRALAARDKKRVAANVDTAEIVERAHAGDALALEA 248 Query: 248 INLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQ 307 + FC LG AG+LAL A GG+YI GG+ K+ +L SSFR FE K + + Sbjct: 249 VECFCAILGTFAGNLALTLGALGGIYIGGGVVPKLGELFTRSSFRARFEAKGRFEAYLAN 308 Query: 308 IPTYVITNPYIAIAGMVSYI 327 IPTY+IT Y A G+ + + Sbjct: 309 IPTYLITAEYPAFLGVSAIL 328 |
Length = 638 |
>gnl|CDD|129832 TIGR00749, glk, glucokinase, proteobacterial type | Back alignment and domain information |
---|
Score = 203 bits (519), Expect = 4e-53 Identities = 112/323 (34%), Positives = 165/323 (51%), Gaps = 25/323 (7%) Query: 16 LLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYR---KISIRLRSAF- 71 L+ DIGGTN R A+ E T D+ +LE ++ +Y K+ ++ A Sbjct: 1 LVGDIGGTNARLALCEIAPGEISQAKTYSGLDFPSLEAVVR--VYLEEHKVELKDPIAKG 58 Query: 72 -LAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVS 130 AIA PI +TN+ W EL + F + +INDF A + AI L + + Sbjct: 59 CFAIACPITGD-WVAMTNHTWAFSIAELKQNLGFSHLEIINDFTAVSYAIPGLKKEDLIQ 117 Query: 131 IGQF-VEDNRSLFSSRVIVGPGTGLGISSVIRAKD-SWIPISCEGGHMDIGPSTQRDYEI 188 G + + + I+G GTGLG++ +I D W+ + EGGH+D P+++ + I Sbjct: 118 FGGAEPVEGKPI----AILGAGTGLGVAHLIHQVDGRWVVLPGEGGHVDFAPNSELEAII 173 Query: 189 FPHLTERAE-GRLSAENLLSGKGLVNIYKALCIADGFESNKVLSS-----KDIVSKS--- 239 +L RA+ G +SAE +LSG GLVNIY+AL AD L KDI ++ Sbjct: 174 LEYL--RAKIGHVSAERVLSGPGLVNIYEALVKADPERQFNKLPQENLKPKDISERALAG 231 Query: 240 EDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKS 299 +A++LFC GR AG+LAL RGGVYI+GGI + I+ + S FR +FE+K Sbjct: 232 SCTDCRRALSLFCVIYGRFAGNLALNLGTRGGVYIAGGIVPRFIEFFKASGFRAAFEDKG 291 Query: 300 PHKELMRQIPTYVITNPYIAIAG 322 KE + IP YV+ + + G Sbjct: 292 RMKEYVHDIPVYVVLHDNPGLLG 314 |
This model represents glucokinase of E. coli and close homologs, mostly from other proteobacteria, presumed to have equivalent function. This glucokinase is more closely related to a number of uncharacterized paralogs than to the glucokinase glcK (fromerly yqgR) of Bacillus subtilis and its closest homologs, so the two sets are represented by separate models. Length = 316 |
>gnl|CDD|183508 PRK12408, PRK12408, glucokinase; Provisional | Back alignment and domain information |
---|
Score = 171 bits (434), Expect = 3e-43 Identities = 93/329 (28%), Positives = 165/329 (50%), Gaps = 19/329 (5%) Query: 8 DFPIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSD---YENLEHA-IQEVI--YR 61 P + AD+GGT+VR A+ + + P+ V+ D Y ++ + ++ + Sbjct: 11 AVPRPESFVAADVGGTHVRVAL---VCASPDAAKPVELLDYRTYRCADYPSLAAILADFL 67 Query: 62 KISIRLRSAFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAIC 121 +R +A A D N W + PE++ +++ + V L+NDFEA A A Sbjct: 68 AECAPVRRGVIASAGYALDDGRVITANLPWTLSPEQIRAQLGLQAVHLVNDFEAVAYAAP 127 Query: 122 SLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPS 181 + + + Q ++ +++GPGTGLG + I + + E G + + Sbjct: 128 YMEGNQVL---QLSGPAQAAAGPALVLGPGTGLGAALWIPNGGRPVVLPTEAGQAALAAA 184 Query: 182 TQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVS---- 237 ++ + ++ HL R + E++LSG GL+N+Y+ALC G + V +S ++ Sbjct: 185 SELEMQLLQHL-LRTRTHVPIEHVLSGPGLLNLYRALCALRG--ATPVHASPAAITAAAL 241 Query: 238 KSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFEN 297 +D +A +A+ +FC +LG V GD+AL + ARGGVY++GGI +I D L S F E F N Sbjct: 242 AGDDALAHEALQVFCGFLGSVVGDMALAYGARGGVYLAGGILPQIADFLARSDFVERFLN 301 Query: 298 KSPHKELMRQIPTYVITNPYIAIAGMVSY 326 K P + + Q+P ++ + + + G S+ Sbjct: 302 KGPMRPALEQVPVKLVEHGQLGVLGAASW 330 |
Length = 336 |
>gnl|CDD|185540 PTZ00288, PTZ00288, glucokinase 1; Provisional | Back alignment and domain information |
---|
Score = 50.7 bits (121), Expect = 5e-07 Identities = 72/348 (20%), Positives = 124/348 (35%), Gaps = 83/348 (23%) Query: 19 DIGGTNVRFAILRSMESEPE------FCCTVQTSDY--------ENLEHAIQEVIYRKIS 64 D+GGTN R R ++ + V +D E L+ + +S Sbjct: 32 DVGGTNARVGFAREVQHDDSGVHIIYVRFNVTKTDIRELLEFFDEVLQKLKKN-----LS 86 Query: 65 IRLRSAFLAIATP------------IGDQKSFTLTNYHWVIDPEELISRMQFEDVLLIND 112 R A AI+ P + LT+Y P EL + L+ND Sbjct: 87 FIQRVAAGAISVPGPVTGGQLAGPFNNLKGIARLTDY-----PVELFPPGRSA---LLND 138 Query: 113 FEAQALAICSLSCSN--------------YVSIGQFVEDNRSLFSSR-VIVGPGTGLGIS 157 EA A + ++S + + ++ + + R +++ PGTGLG S Sbjct: 139 LEAGAYGVLAVSNAGRLSEYFKVMWKGTQWDALSEGKPAGSVIGRGRCMVLAPGTGLGSS 198 Query: 158 SVIRA--KDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIY 215 + D +I I E GH+ I D + L + ++ + S + IY Sbjct: 199 LIHYVGVSDQYIVIPLECGHLSISWPANEDSDYVQALAGYLASKALSKGIDS--TVYPIY 256 Query: 216 KALCIADGFESN---------------KVLSSKDIVSKSEDPIALKAINLFCEYLGRVAG 260 + + G E N + + D A+KA+ +YL R+A Sbjct: 257 EDIVSGRGLEFNYAYEKRGNKPSAPLKEAAEVAKLAKYGSDVAAVKAMKRHYKYLMRLAA 316 Query: 261 DLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQI 308 ++++ F+ V + I + NS F F+N K+L +I Sbjct: 317 EISMQFLPLTVVLMGDNI-------VYNSFF---FDNPENVKQLQARI 354 |
Length = 405 |
>gnl|CDD|145702 pfam02685, Glucokinase, Glucokinase | Back alignment and domain information |
---|
Score = 339 bits (871), Expect = 8e-94 Identities = 133/314 (42%), Positives = 183/314 (58%), Gaps = 13/314 (4%) Query: 16 LLADIGGTNVRFAILRSMESEPEFCC--TVQTSDYENLEHAIQEVI--YRKISIRLRSAF 71 L DIGGTN RFA++ EP T ++DY +LE A+Q+ + R R A Sbjct: 1 LAGDIGGTNARFALVDDAGGEPILLSIRTYASADYPSLEEALQDYLAEADAGVARPRHAC 60 Query: 72 LAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSI 131 A+A P+ LTN WVI EEL + + + V LINDFEAQA AI L + V + Sbjct: 61 FAVAGPVDGD-EVRLTNLPWVISIEELRAALGLDAVHLINDFEAQAYAIPRLGADDLVQL 119 Query: 132 GQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFPH 191 G D + ++GPGTGLG++ +I WI + EGGH+D P ++R+ E+ + Sbjct: 120 GGGKPDP---GAPIAVLGPGTGLGVAGLIPTGGGWIVLPGEGGHVDFAPRSEREAELLQY 176 Query: 192 LTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKS---EDPIALKAI 248 L R G +SAE +LSG GLVN+Y+ALC DG ++L DI + + +DP+A +A+ Sbjct: 177 LRRR-FGHVSAERVLSGPGLVNLYRALCALDGLTP-ELLLPADITAAALAGDDPLAREAL 234 Query: 249 NLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQI 308 LFC LG VAG+LAL ARGGVYI+GGI +I++ L+ S FR FE+K L+R I Sbjct: 235 ELFCAILGSVAGNLALTLGARGGVYIAGGIAPRILEFLKASGFRARFEDKGRFSALLRDI 294 Query: 309 PTYVITNPYIAIAG 322 P YVIT+P + G Sbjct: 295 PVYVITHPQPGLLG 308 |
This is a family of glucokinases or glucose kinases EC:2.7.1.2. These enzymes phosphorylate glucose using ATP as a donor to give glucose-6-phosphate and ADP. Length = 316 |
>gnl|CDD|32123 COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] | Back alignment and domain information |
---|
Score = 49.4 bits (117), Expect = 2e-06 Identities = 63/291 (21%), Positives = 97/291 (33%), Gaps = 40/291 (13%) Query: 10 PIAFPVLLADIGGTNVRFAILRS---MESEPEFCCTVQTSDYENLEHAIQEVIYRKISIR 66 P A VL DIGGT ++ A++ + + LE + V + Sbjct: 3 PEAMTVLGIDIGGTKIKVALVDLDGEILLRERIPTPTPDPEEAILEAILALVAELLKQAQ 62 Query: 67 LRSAFLAIATPI-----GDQKSFTLTNYHWVIDP---EELISRMQFEDVLLINDFEAQAL 118 R A + I P N W EEL +R+ V + ND A AL Sbjct: 63 GRVAIIGIGIPGPGDVDNGTVIVPAPNLGWWNGVDLAEELEARLGLP-VFVENDANAAAL 121 Query: 119 AICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDI 178 A G + ++ + +G G G GI + + E GHM + Sbjct: 122 A--------EAWFGAGRGIDDVVY---ITLGTGIGGGIIVNGKLLRGANGNAGEIGHMVV 170 Query: 179 GPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVS- 237 P + L E SG+ ++ L++KDI Sbjct: 171 DPDGECGCGRRGCL----------ETYASGRAILRRAA----EALESEAGELTAKDIFEL 216 Query: 238 -KSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLR 287 + DP+A + I +YL R +L + + I GG + DLL Sbjct: 217 AAAGDPLAKEVIERAADYLARGLANLINLL-DPEVIVIGGGGVSALGDLLL 266 |
Length = 314 |
Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
Identity | Alignment graph | Length | Definition | Probability |
Target | 348 | glucokinase [Candidatus Liberibacter asiaticus str. psy | ||
PRK00292 | 315 | glk glucokinase; Provisional | 100.0 | |
PRK12408 | 336 | glucokinase; Provisional | 100.0 | |
pfam02685 | 316 | Glucokinase Glucokinase. This is a family of glucokinas | 100.0 | |
COG0837 | 320 | Glk Glucokinase [Carbohydrate transport and metabolism] | 100.0 | |
TIGR00749 | 342 | glk glucokinase; InterPro: IPR003836 Glucokinases 2.7.1 | 100.0 | |
PRK05082 | 291 | N-acetylmannosamine kinase; Provisional | 100.0 | |
TIGR00744 | 326 | ROK_glcA_fam ROK family protein (putative glucokinase); | 100.0 | |
PRK09557 | 301 | fructokinase; Reviewed | 100.0 | |
PRK13310 | 302 | N-acetyl-D-glucosamine kinase; Provisional | 100.0 | |
PRK09698 | 302 | D-allose kinase; Provisional | 100.0 | |
COG1940 | 314 | NagC Transcriptional regulator/sugar kinase [Transcript | 100.0 | |
pfam01869 | 288 | BcrAD_BadFG BadF/BadG/BcrA/BcrD ATPase family. This fam | 99.54 | |
COG2971 | 301 | Predicted N-acetylglucosamine kinase [Carbohydrate tran | 99.17 | |
COG5026 | 466 | Hexokinase [Carbohydrate transport and metabolism] | 98.89 | |
PTZ00107 | 485 | hexokinase; Provisional | 98.88 | |
KOG1794 | 336 | consensus | 98.83 | |
KOG1369 | 474 | consensus | 98.77 | |
PRK03011 | 356 | butyrate kinase; Provisional | 98.62 | |
PRK13317 | 273 | pantothenate kinase; Provisional | 98.46 | |
PRK13322 | 252 | pantothenate kinase; Reviewed | 98.15 | |
TIGR02707 | 353 | butyr_kinase butyrate kinase; InterPro: IPR011245 This | 98.0 | |
pfam03630 | 329 | Fumble Fumble. Fumble is required for cell division in | 97.84 | |
PRK13334 | 262 | consensus | 97.7 | |
PRK13311 | 256 | N-acetyl-D-glucosamine kinase; Provisional | 100.0 | |
PTZ00288 | 411 | glucokinase 1; Provisional | 99.92 | |
COG1521 | 251 | Pantothenate kinase type III (Bvg accessory factor fami | 97.65 | |
pfam00480 | 181 | ROK ROK family. | 99.96 | |
PRK07157 | 398 | acetate kinase; Provisional | 98.22 | |
PRK12397 | 404 | propionate kinase; Reviewed | 98.2 | |
pfam00871 | 387 | Acetate_kinase Acetokinase family. This family includes | 98.15 | |
PRK00180 | 399 | acetate kinase; Reviewed | 98.02 | |
PRK12379 | 400 | propionate/acetate kinase; Provisional | 97.92 | |
PRK12440 | 397 | acetate kinase; Reviewed | 95.45 | |
PRK07058 | 393 | acetate kinase; Provisional | 93.9 | |
KOG2201 | 371 | consensus | 93.56 | |
PRK13329 | 246 | pantothenate kinase; Reviewed | 98.17 | |
PRK13332 | 251 | consensus | 97.88 | |
PRK13318 | 258 | pantothenate kinase; Reviewed | 97.81 | |
PRK13321 | 256 | pantothenate kinase; Reviewed | 97.66 | |
PRK13326 | 262 | pantothenate kinase; Reviewed | 97.61 | |
PRK13319 | 258 | consensus | 97.58 | |
PRK13320 | 245 | pantothenate kinase; Reviewed | 97.43 | |
PRK13324 | 258 | pantothenate kinase; Reviewed | 97.2 | |
PRK13328 | 255 | pantothenate kinase; Reviewed | 96.84 | |
PRK13327 | 242 | pantothenate kinase; Reviewed | 96.55 | |
PRK13323 | 258 | consensus | 96.35 | |
PRK13330 | 257 | consensus | 95.81 | |
pfam03309 | 206 | Bvg_acc_factor Bordetella pertussis Bvg accessory facto | 95.76 | |
COG3426 | 358 | Butyrate kinase [Energy production and conversion] | 97.46 | |
COG1070 | 502 | XylB Sugar (pentulose and hexulose) kinases [Carbohydra | 97.25 | |
PRK00047 | 498 | glpK glycerol kinase; Provisional | 97.09 | |
PRK10331 | 470 | L-fuculokinase; Provisional | 96.91 | |
PRK00290 | 631 | dnaK molecular chaperone DnaK; Provisional | 96.72 | |
PRK04123 | 542 | ribulokinase; Provisional | 96.47 | |
PTZ00294 | 510 | glycerol kinase; Provisional | 96.34 | |
PRK10939 | 521 | autoinducer-2 (AI-2) kinase; Provisional | 96.19 | |
PRK09604 | 335 | putative DNA-binding/iron metalloprotein/AP endonucleas | 95.72 | |
TIGR02628 | 473 | fuculo_kin_coli L-fuculokinase; InterPro: IPR013450 Pro | 95.0 | |
PRK00976 | 324 | hypothetical protein; Provisional | 94.25 | |
pfam03727 | 238 | Hexokinase_2 Hexokinase. Hexokinase (EC:2.7.1.1) contai | 91.99 | |
TIGR01312 | 494 | XylB xylulokinase; InterPro: IPR006000 The ability to m | 91.83 | |
TIGR03281 | 326 | methan_mark_12 putative methanogenesis marker protein 1 | 90.03 | |
pfam00349 | 205 | Hexokinase_1 Hexokinase. Hexokinase (EC:2.7.1.1) contai | 97.39 | |
PRK13331 | 251 | pantothenate kinase; Reviewed | 96.74 | |
COG5146 | 342 | PanK Pantothenate kinase, acetyl-CoA regulated [Coenzym | 96.56 | |
pfam05378 | 175 | Hydant_A_N Hydantoinase/oxoprolinase N-terminal region. | 96.55 | |
COG1924 | 396 | Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-c | 96.55 | |
COG1548 | 330 | Predicted transcriptional regulator/sugar kinase [Trans | 96.42 | |
TIGR03123 | 318 | one_C_unchar_1 probable H4MPT-linked C1 transfer pathwa | 95.5 | |
TIGR03192 | 293 | benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subuni | 93.7 | |
PRK09472 | 420 | ftsA cell division protein FtsA; Reviewed | 93.27 | |
smart00842 | 187 | FtsA Cell division protein FtsA. FtsA is essential for | 93.26 | |
COG0443 | 579 | DnaK Molecular chaperone [Posttranslational modificatio | 97.29 | |
CHL00094 | 622 | dnaK heat shock protein 70 | 97.25 | |
pfam00012 | 598 | HSP70 Hsp70 protein. Hsp70 chaperones help to fold many | 97.14 | |
PTZ00186 | 657 | heat shock 70 kDa precursor protein; Provisional | 97.07 | |
PRK13411 | 655 | molecular chaperone DnaK; Provisional | 96.89 | |
PRK13410 | 719 | molecular chaperone DnaK; Provisional | 96.86 | |
PRK05183 | 621 | hscA chaperone protein HscA; Provisional | 95.79 | |
PRK01433 | 595 | hscA chaperone protein HscA; Provisional | 95.66 | |
PTZ00009 | 657 | heat shock 70 kDa protein; Provisional | 90.99 | |
pfam00370 | 245 | FGGY_N FGGY family of carbohydrate kinases, N-terminal | 96.91 | |
COG0145 | 674 | HyuA N-methylhydantoinase A/acetone carboxylase, beta s | 95.27 | |
COG0554 | 499 | GlpK Glycerol kinase [Energy production and conversion] | 90.39 | |
PRK00109 | 141 | Holliday junction resolvase-like protein; Reviewed | 96.32 | |
smart00732 | 99 | YqgFc Likely ribonuclease with RNase H fold. YqgF prote | 96.21 | |
pfam03652 | 134 | UPF0081 Uncharacterized protein family (UPF0081). | 96.06 | |
PRK13928 | 325 | rod shape-determining protein Mbl; Provisional | 92.71 | |
PRK13930 | 336 | rod shape-determining protein MreB; Provisional | 92.52 | |
TIGR02529 | 240 | EutJ ethanolamine utilization protein EutJ family prote | 91.54 | |
COG0816 | 141 | Predicted endonuclease involved in recombination (possi | 90.48 | |
PRK13929 | 335 | rod-share determining protein MreBH; Provisional | 90.15 | |
COG0282 | 396 | ackA Acetate kinase [Energy production and conversion] | 94.07 | |
KOG2517 | 516 | consensus | 92.31 |
>PRK00292 glk glucokinase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=437.59 Aligned_cols=311 Identities=38% Similarity=0.694 Sum_probs=283.1 Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCCC Q ss_conf 73799985751189999877998088999743887358899999999722345655469997304416855642135666 Q gi|254780280|r 13 FPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYHWV 92 (348) Q Consensus 13 ~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~~~~ 92 (348) T Consensus 2 ~~iLvaDIGGTn~R~al~~~~~~~~~~~~~~~~~~~~s~~~~l~~~l~~~~-~~~~~a~iavAGPv~~~-~~~lTN~~W~ 79 (315) T PRK00292 2 KPALVGDIGGTNARFALCDDASGEILQAKVYSTADYPSLEEAVRVYLDEHG-VQVGDACFAIAGPVDGD-EVRMTNHHWV 79 (315) T ss_pred CCEEEEECCHHHHHHEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHCC-CCCCEEEEEEECCCCCC-EEEEECCCCE T ss_conf 853899817544444245369986200258956887899999999998579-98354999997875399-8876667737 Q ss_pred CCHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEECCCC Q ss_conf 69889999828985588212654320000158655353024345576667527993176202245431058863011356 Q gi|254780280|r 93 IDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCE 172 (348) Q Consensus 93 ~~~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~agE 172 (348) T Consensus 80 i~~~~l~~~~g~~~v~liNDf~A~a~~l~~l~~~~l~~i~~g~~---~~~~~~~viGpGTGLG~a~l~~~~~~~~~~~sE 156 (315) T PRK00292 80 FSIARMAAELGLDHLLLINDFTAQALAIPRLGEEDLIQVGGGEP---VPGAPIAVIGPGTGLGVAGLVHVDGGWVVLPGE 156 (315) T ss_pred EEHHHHHHHHCCCCEEEEECHHHHHCCCCCCCHHHEEECCCCCC---CCCCCEEEEECCCCCCEEEEEECCCEEEECCCC T ss_conf 53999998639881899845677862666699878067079989---999957999468876446789759914872356 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH---HCCCHHHHHHHH Q ss_conf 78666676610234789999853189864877522223899999998740888643698889988---368957999999 Q gi|254780280|r 173 GGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVS---KSEDPIALKAIN 249 (348) Q Consensus 173 ~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~~~---~~~D~~A~~~~~ 249 (348) T Consensus 157 gGH~~fap~~~~e~~l~~~L~~~~-g~vs~E~vlSG~GL~~ly~~l~~~~~~~~~-~~~~~~I~~~Al~~~d~~a~~~~~ 234 (315) T PRK00292 157 GGHVDFAPRSEEEAQILEYLRAEI-GHVSAERVLSGPGLVNLYRALCASDGILPE-LLTPADITEAALAGSDPLARRTLS 234 (315) T ss_pred CCCCCCCCCCHHHHHHHHHHHHHC-CCCCCEEEECCHHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHHCCCCHHHHHHHH T ss_conf 656567989978999999999864-987230042425299999999864288877-699899999986399979999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHC Q ss_conf 99999999999999974899738996567765567727648999988379837889738879995787227759998738 Q gi|254780280|r 250 LFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAGMVSYIKM 329 (348) Q Consensus 250 ~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~GAa~~~r~ 329 (348) T Consensus 235 ~F~~~lG~~agdlaL~~~a~GGvylaGGi~~~l~~~l~~~~F~~~F~~kg~~~~~l~~iPv~li~~~~~gL~GAA~~~~q 314 (315) T PRK00292 235 LFCVILGRVAGNLALTLGARGGVYIAGGIVPRFLEFFKASGFRAAFEDKGRFSAYLADIPVYVVTHPQPGLLGAGAYLRQ 314 (315) T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHC T ss_conf 99999999998889975589759996667887886627288999987067367898569579994897428889999864 Q ss_pred C Q ss_conf 0 Q gi|254780280|r 330 T 330 (348) Q Consensus 330 ~ 330 (348) T Consensus 315 ~ 315 (315) T PRK00292 315 A 315 (315) T ss_pred C T ss_conf 9 |
|
>PRK12408 glucokinase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=436.63 Aligned_cols=321 Identities=28% Similarity=0.499 Sum_probs=286.0 Q ss_pred CCCCCCCCCCEEEEEECCCCEEEEEEECCCC-----EEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEE Q ss_conf 3458766773799985751189999877998-----08899974388735889999999972234565546999730441 Q gi|254780280|r 5 SKKDFPIAFPVLLADIGGTNVRFAILRSMES-----EPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIG 79 (348) Q Consensus 5 ~~~~~~~~~~vL~iDIGGT~ir~glv~~~~~-----~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~ 79 (348) T Consensus 8 ~~~~~p~~~~iLvaDIGGTN~R~al~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~l~~~--~~~~~~~~avAG~~v 85 (336) T PRK12408 8 AAVAFPRPPSFVAADVGGTHVRVALVCASPDAAKPVQLLDYRTYRCADYPSLAAILADFLAEC--APVRRCVIASAGYAL 85 (336) T ss_pred CCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHC--CCCCCEEEEEECCCC T ss_conf 556899999789998555468686110378877751120005775678689999999998517--886516999966766 Q ss_pred CCCEEEECCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEE Q ss_conf 68556421356666988999982898558821265432000015865535302434557666752799317620224543 Q gi|254780280|r 80 DQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSV 159 (348) Q Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~ 159 (348) T Consensus 86 ~~~~~~~TN~~W~i~~~~l~~~~g~~~v~liNDf~A~a~~~~~L~~~~l~~l~~~~~---~~~~~~~ViGpGTGLG~a~l 162 (336) T PRK12408 86 DDGTVITANLPWTLSPEQIRAQLGLQAVHLVNDFEAVAYAAPYMEGNQVLQLSGPAQ---AAAGPALVLGPGTGLGAALW 162 (336) T ss_pred CCCEEECCCCCCEECHHHHHHHHCCCEEEEEECHHHHHCCCCCCCHHHEEEECCCCC---CCCCCEEEEECCCCCCEEEE T ss_conf 797897568992875999998709984999955788862444589778688079988---89986799957887503689 Q ss_pred ECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHH--H- Q ss_conf 1058863011356786666766102347899998531898648775222238999999987408886436988899--8- Q gi|254780280|r 160 IRAKDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDI--V- 236 (348) Q Consensus 160 ~~~~~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~--~- 236 (348) T Consensus 163 ~~~~~~~~v~psEgGH~~fap~~~~E~~l~~~L~~~-~~~vs~E~vlSG~GL~~iy~~l~~~~~~~~~~~~-~~~I~~~a 240 (336) T PRK12408 163 IPNGGRPVVLPTEAGQAALASATELEMQLLRHLLRD-RTHVPIEHVLSGPGLLNLYRALCALRGATPVHAS-PAAITHAA 240 (336) T ss_pred EECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHH T ss_conf 965991597025665445699998999999999860-5955050043314499999999985388767699-89999998 Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECC Q ss_conf 83689579999999999999999999997489973899656776556772764899998837983788973887999578 Q gi|254780280|r 237 SKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNP 316 (348) Q Consensus 237 ~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~ 316 (348) T Consensus 241 ~~~~d~~a~~tl~~F~~~lG~~agdlAL~~~a~GGVyiaGGI~~~l~~~l~~~~F~~~F~~kg~~~~~l~~iPv~lv~~~ 320 (336) T PRK12408 241 LAGDDALAREALQVFCGFLGSVVGDMALAYGARGGVYLAGGILPQIREFLARSDFVERFLDKGPMREALEQVPVKLVEHG 320 (336) T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHCCCEEEEECC T ss_conf 70999899999999999999999999998768975999576778678550758999998746718899855957999279 Q ss_pred CCHHHHHHHHHHCCCC Q ss_conf 7227759998738001 Q gi|254780280|r 317 YIAIAGMVSYIKMTDC 332 (348) Q Consensus 317 ~agl~GAa~~~r~~~~ 332 (348) T Consensus 321 ~~gL~GAA~~~~~~~~ 336 (336) T PRK12408 321 QLGVLGAASWYLQHGR 336 (336) T ss_pred CHHHHHHHHHHHHHCC T ss_conf 7308889999997459 |
|
>pfam02685 Glucokinase Glucokinase | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=430.32 Aligned_cols=308 Identities=43% Similarity=0.715 Sum_probs=278.2 Q ss_pred EEEEECCCCEEEEEEECCCCE--EEEEEEECCCCCCCHHHHHHHHHHHCC--CCCCCEEEEEEEEEEECCCEEEECCCCC Q ss_conf 999857511899998779980--889997438873588999999997223--4565546999730441685564213566 Q gi|254780280|r 16 LLADIGGTNVRFAILRSMESE--PEFCCTVQTSDYENLEHAIQEVIYRKI--SIRLRSAFLAIATPIGDQKSFTLTNYHW 91 (348) Q Consensus 16 L~iDIGGT~ir~glv~~~~~~--i~~~~~~~t~~~~~~~~~i~~~l~~~~--~~~~~~igi~v~Gpv~~~~~~~~~~~~~ 91 (348) T Consensus 1 LvaDIGGTn~R~al~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~l~~~~~~~~~~~~~~~avAGPv~~~-~~~lTN~~W 79 (316) T pfam02685 1 LAGDIGGTNARFALVDDAGGEPILLSIRTYASADYPSLEEALQDYLAEADAGVARPRHACFAVAGPVDGD-EVRLTNLPW 79 (316) T ss_pred CCEEECHHHHHHEEEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCC-EEEEECCCC T ss_conf 9277474335244785589863212225972588689999999999846866678676999986775399-788747860 Q ss_pred CCCHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEECCC Q ss_conf 66988999982898558821265432000015865535302434557666752799317620224543105886301135 Q gi|254780280|r 92 VIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISC 171 (348) Q Consensus 92 ~~~~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~ag 171 (348) T Consensus 80 ~i~~~~l~~~~g~~~v~liNDf~A~a~~l~~l~~~~~~~i~~g~~---~~~~~~~viGpGTGLG~a~l~~~~~~~~v~~s 156 (316) T pfam02685 80 VISIEELRAALGLDAVHLINDFEAQAYAIPRLGADDLVQLGGGKP---DPGAPIAVLGPGTGLGVAGLIPTGGGWIVLPG 156 (316) T ss_pred EECHHHHHHHHCCCEEEEECCHHHHHCCCCCCCHHHCEEECCCCC---CCCCCEEEEECCCCCCEEEEEECCCCEEECCC T ss_conf 655999999729985999727778870454599878066079989---99996799967887524778986995385557 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH---HCCCHHHHHHH Q ss_conf 678666676610234789999853189864877522223899999998740888643698889988---36895799999 Q gi|254780280|r 172 EGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVS---KSEDPIALKAI 248 (348) Q Consensus 172 E~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~~~---~~~D~~A~~~~ 248 (348) T Consensus 157 EgGH~~fap~~~~e~~l~~~L~~~-~g~vs~E~vlSG~GL~~ly~~l~~~~~~~~-~~~~~~~I~~~A~~~~d~~a~~~~ 234 (316) T pfam02685 157 EGGHVDFAPRSEREAELLQYLRRR-FGHVSAERVLSGPGLVNLYRALCALDGLTP-ELLLPADITAAALAGDDPLAREAL 234 (316) T ss_pred CCCCCCCCCCCHHHHHHHHHHHHH-CCCCCCEEEECCHHHHHHHHHHHHHCCCCC-CCCCHHHHHHHHHHCCCHHHHHHH T ss_conf 664556799997999999999986-497604002254539999999985248987-779999999999809997899999 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHHHHHHHH Q ss_conf 99999999999999997489973899656776556772764899998837983788973887999578722775999873 Q gi|254780280|r 249 NLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAGMVSYIK 328 (348) Q Consensus 249 ~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~GAa~~~r 328 (348) T Consensus 235 ~~F~~~lG~~~gdlaL~~~a~GGvylaGGi~~~l~~~l~~~~F~~~F~~kg~~~~~l~~iPv~li~~~~~gL~GAa~~a~ 314 (316) T pfam02685 235 ELFCAILGSVAGNLALTLGARGGVYIAGGIAPRILEFLKASGFRARFEDKGRFSALLRDIPVYVITHPQPGLLGAAAAAR 314 (316) T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHH T ss_conf 99999999999999997379955999660577778561768999998616617899854957999389741888999996 Q ss_pred C Q ss_conf 8 Q gi|254780280|r 329 M 329 (348) Q Consensus 329 ~ 329 (348) T Consensus 315 q 315 (316) T pfam02685 315 Q 315 (316) T ss_pred C T ss_conf 3 |
This is a family of glucokinases or glucose kinases EC:2.7.1.2. These enzymes phosphorylate glucose using ATP as a donor to give glucose-6-phosphate and ADP. |
>COG0837 Glk Glucokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=410.84 Aligned_cols=315 Identities=41% Similarity=0.711 Sum_probs=290.2 Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCC Q ss_conf 66773799985751189999877998088999743887358899999999722345655469997304416855642135 Q gi|254780280|r 10 PIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNY 89 (348) Q Consensus 10 ~~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~ 89 (348) T Consensus 3 ~~~~p~LvgDIGGTnaRfaLv~~a~~~~~~~~~~~~~dypsle~av~~yl~~~~~~~~~~a~~AiAgPv~gd-~v~lTN~ 81 (320) T COG0837 3 AMGYPRLVGDIGGTNARFALVEIAPAEPLQAETYACADYPSLEEAVQDYLSEHTAVAPRSACFAIAGPIDGD-EVRLTNH 81 (320) T ss_pred CCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC-EEEEECC T ss_conf 777736787328851578985068898111110024675788999999999842037662599985575488-7776458 Q ss_pred CCCCCHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEEC Q ss_conf 66669889999828985588212654320000158655353024345576667527993176202245431058863011 Q gi|254780280|r 90 HWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPI 169 (348) Q Consensus 90 ~~~~~~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~ 169 (348) T Consensus 82 ~W~~s~~~~r~~Lgl~~v~liNDF~A~A~Ai~~l~~~dl~qigg~~~~---~~a~~avlGPGTGLGVa~Lv~~~~~w~~l 158 (320) T COG0837 82 DWVFSIARMRAELGLDHLSLINDFAAQALAIPRLGAEDLEQIGGGKPE---PNAPRAVLGPGTGLGVAGLVPNGGGWIPL 158 (320) T ss_pred CCEECHHHHHHHCCCCCEEEECHHHHHHHHCCCCCHHHHHHHCCCCCC---CCCCEEEECCCCCCCEEEEEECCCEEEEC T ss_conf 511059999975498817986138887740354698888874499877---89941897689875246899539826861 Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHC-CCHHHHH Q ss_conf 356786666766102347899998531898648775222238999999987408886436988899--8836-8957999 Q gi|254780280|r 170 SCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDI--VSKS-EDPIALK 246 (348) Q Consensus 170 agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~--~~~~-~D~~A~~ 246 (348) T Consensus 159 p~EGGHvdf~P~~~~E~~i~~~l~~~-~GrVS~Er~LSG~GL~~iY~al~~~~~~~~~~~~p-~~It~~al~g~d~~a~~ 236 (320) T COG0837 159 PGEGGHVDFAPRSEREFQILEYLRAR-FGRVSAERVLSGPGLVNLYRALCAADGRLPEDLTP-AAITERALAGGDALARE 236 (320) T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHH-CCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCH-HHHHHHHHCCCCHHHHH T ss_conf 67776556799987799999999986-19511534115646999999998763788554798-99999886289878999 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHHHHHH Q ss_conf 99999999999999999974899738996567765567727648999988379837889738879995787227759998 Q gi|254780280|r 247 AINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAGMVSY 326 (348) Q Consensus 247 ~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~GAa~~ 326 (348) T Consensus 237 tl~lF~~~lG~~AGdlAL~lgarGGVyiaGGI~pril~~l~~s~Fr~~FedKGr~sa~l~~IPV~vi~~~~~gL~Gaa~~ 316 (320) T COG0837 237 TLSLFCAILGRVAGDLALTLGARGGVYIAGGIVPRILEALKASGFRARFEDKGRMSAYLADIPVYVILHPQPGLLGAAAA 316 (320) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHHHHHH T ss_conf 99999999876777788865156747871775086898874336888876337537788509779995488417778887 Q ss_pred HHCC Q ss_conf 7380 Q gi|254780280|r 327 IKMT 330 (348) Q Consensus 327 ~r~~ 330 (348) T Consensus 317 ~~~~ 320 (320) T COG0837 317 LRQP 320 (320) T ss_pred HCCC T ss_conf 5189 |
|
>TIGR00749 glk glucokinase; InterPro: IPR003836 Glucokinases 2 | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=373.72 Aligned_cols=305 Identities=33% Similarity=0.543 Sum_probs=266.4 Q ss_pred EEEEECCCCEEEEEE---ECCCCEEEEE----EEECCCCCCCHHHHHHHHHHHCC---CCC---CCEEEEEEEEEEECCC Q ss_conf 999857511899998---7799808899----97438873588999999997223---456---5546999730441685 Q gi|254780280|r 16 LLADIGGTNVRFAIL---RSMESEPEFC----CTVQTSDYENLEHAIQEVIYRKI---SIR---LRSAFLAIATPIGDQK 82 (348) Q Consensus 16 L~iDIGGT~ir~glv---~~~~~~i~~~----~~~~t~~~~~~~~~i~~~l~~~~---~~~---~~~igi~v~Gpv~~~~ 82 (348) T Consensus 1 L~gDiGGT~arlaL~tine~apg~i~~~tlfe~tys~~dfpsL~~~vr~yl~e~k~~lk~hPIsva~gcfAiA~Pi~gd- 79 (342) T TIGR00749 1 LVGDIGGTNARLALVTINEVAPGEIEPVTLFEKTYSSEDFPSLEDVVRVYLEEAKVELKDHPISVAKGCFAIAGPIIGD- 79 (342) T ss_pred CCCCCCCHHHHHHHHEEECCCCCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCEEECCCCCC- T ss_conf 9646552646312120003477642001122445246775135899999988646664367601000010031552012- Q ss_pred EEEECCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEEC- Q ss_conf 5642135666698899998289855882126543200001586553530243455766675279931762022454310- Q gi|254780280|r 83 SFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIR- 161 (348) Q Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~- 161 (348) T Consensus 80 ~v~mTN~~W~fSi~~~~q~L~~~~l~~INDF~Av~yaI~~l~~edL~~~gga~~---~~~~piAilGaGTGLGv~~li~~ 156 (342) T TIGR00749 80 FVRMTNLDWAFSIDRLKQELALAKLDVINDFAAVAYAILALKEEDLIQLGGAKV---DESKPIAILGAGTGLGVAYLIQQ 156 (342) T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEC---CCCCCEEEECCCCCCCEEEEEEC T ss_conf 443136731102899998630455234333788887653215133022335100---58886587668876732688883 Q ss_pred CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCCCHHHHHCCHHHHHHHHHHHHHCCCCC----C----CCCCH Q ss_conf 58863011356786666766102347899998531-898648775222238999999987408886----4----36988 Q gi|254780280|r 162 AKDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERA-EGRLSAENLLSGKGLVNIYKALCIADGFES----N----KVLSS 232 (348) Q Consensus 162 ~~~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~-g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~----~----~~~~~ 232 (348) T Consensus 157 ~dgr~~vlpgEGgHvdFAP~s~lE~~~leylr~k~slghvSaERvlSG~Glv~iYeal~k~~~~~~saq~~kL~~~~l~p 236 (342) T TIGR00749 157 SDGRYKVLPGEGGHVDFAPRSELEILVLEYLRKKYSLGHVSAERVLSGSGLVLIYEALRKRKPERESAQVSKLSKEELKP 236 (342) T ss_pred CCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC T ss_conf 68427862667885577988767899999987531358678987634202899999985127503457754203543572 Q ss_pred HH--------------HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHC Q ss_conf 89--------------9883689579999999999999999999997489973899656776556772764899998837 Q gi|254780280|r 233 KD--------------IVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENK 298 (348) Q Consensus 233 ~~--------------~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~ 298 (348) T Consensus 237 kdqetktvdlaaaise~AL~g~~~~cr~al~lFc~~~G~~agnlAL~Lg~rGGvy~aGGI~Prfi~~fk~s~Fra~FedK 316 (342) T TIGR00749 237 KDQETKTVDLAAAISEAALEGDDVLCRRALELFCSILGALAGNLALKLGARGGVYVAGGIVPRFIEYFKKSSFRAAFEDK 316 (342) T ss_pred CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCC T ss_conf 00111245688899998735883578889999999986558889987428875487444043678876068854344555 Q ss_pred CCHHHHHHHCCEEEEECCCCHHHHHH Q ss_conf 98378897388799957872277599 Q gi|254780280|r 299 SPHKELMRQIPTYVITNPYIAIAGMV 324 (348) Q Consensus 299 ~~~~~~l~~ipv~~~~~~~agl~GAa 324 (348) T Consensus 317 GRm~~~~~~IPV~vvl~~~pGL~Gag 342 (342) T TIGR00749 317 GRMKSYLADIPVYVVLKKKPGLLGAG 342 (342) T ss_pred HHHHHHHCCCCEEEEECCCCCCCCCC T ss_conf 15788742598589980777765679 |
7.1.2 from EC are found in invertebrates and microorganisms and are highly specific for glucose. These enzymes phosphorylate glucose using ATP as a donor to give glucose-6-phosphate and ADP .; GO: 0004340 glucokinase activity, 0005524 ATP binding, 0006096 glycolysis. |
>PRK05082 N-acetylmannosamine kinase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=314.71 Aligned_cols=277 Identities=17% Similarity=0.163 Sum_probs=203.5 Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCC---HHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEEC-- Q ss_conf 73799985751189999877998088999743887358---8999999997223456554699973044168556421-- Q gi|254780280|r 13 FPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYEN---LEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLT-- 87 (348) Q Consensus 13 ~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~---~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~-- 87 (348) T Consensus 1 M~~lgiDiGGT~ik~~lvd~-~G~i~~~~~~~t~~~~~~~~~~~~i~~~~~~~-~~~~~~igi~~pG~v~~~~~~~~~~~ 78 (291) T PRK05082 1 MTTLAIDIGGTKIAAALVGE-DGQISQRRQIPTPASQTPEALRDALEALVSPL-QAQADRVAVASTGIINDGVLTALNPH 78 (291) T ss_pred CCEEEEEECCCEEEEEEECC-CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHH-HHHCCEEEECCEEEECCCEEEEECCC T ss_conf 96999995734099999959-99599999997999889999999999999998-85569688742220549866996687 Q ss_pred CCC-CC-CCHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCC-- Q ss_conf 356-66-69889999828985588212654320000158655353024345576667527993176202245431058-- Q gi|254780280|r 88 NYH-WV-IDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAK-- 163 (348) Q Consensus 88 ~~~-~~-~~~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~-- 163 (348) T Consensus 79 nl~~~~~~pl~~~l~~~~~~pv~v~NDan~aalgE~~~--------------~~~~~~~~v~ltlGTGIGggiv~~G~l~ 144 (291) T PRK05082 79 NLGGLLHFPLVQTLEQITDLPTIALNDAQAAAWAEYQA--------------LEDDIDNMVFITVSTGVGGGIVLNGKLL 144 (291) T ss_pred CCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHC--------------CCCCCCCEEEEEECCCCCCEEEECCCCC T ss_conf 77875697569999997798989975067879888653--------------4678887899997566453799899404 Q ss_pred CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHCCC Q ss_conf 8630113567866667661023478999985318986487752222389999999874088864369888--99883689 Q gi|254780280|r 164 DSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSK--DIVSKSED 241 (348) Q Consensus 164 ~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~--~~~~~~~D 241 (348) T Consensus 145 ~G~~g~AGEiGH~~v~~~g~---------~c~cG~~GclE~~~Sg~al~~~~~~~--------~~~~~~~~i~~~a~~gd 207 (291) T PRK05082 145 TGPGGLAGHIGHTLADPHGP---------VCGCGRRGCVEAIASGRAIAAAAQGW--------LAGCDAKTVFERAGQGD 207 (291) T ss_pred CCCCCCCCEEEEEEECCCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHC--------CCCCCHHHHHHHHHCCC T ss_conf 78887377445788648998---------67999956599987499999997522--------68999999999998799 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEE-ECCCCHH Q ss_conf 579999999999999999999997489973899656776556772764899998837983788973887999-5787227 Q gi|254780280|r 242 PIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVI-TNPYIAI 320 (348) Q Consensus 242 ~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~-~~~~agl 320 (348) T Consensus 208 ~~a~~~~~~~~~~La~~i~nl~~~ldPe~-IviGGGis~~-~~~l--~~i~~~l~~~~---~-~~~~~i~~a~lg~dAgl 279 (291) T PRK05082 208 EQAQALINRSAQAIARLIADLKATLDCQC-VVLGGSVGLA-EGYL--ELVEAYLAQEP---A-IYHVPLLAAHYRHDAGL 279 (291) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECCCCCC-HHHH--HHHHHHHHHCC---C-CCCCEEEECCCCCHHHH T ss_conf 89999999999999999999998418798-9994831041-7699--99999998547---7-77986998673686889 Q ss_pred HHHHHHHHCC Q ss_conf 7599987380 Q gi|254780280|r 321 AGMVSYIKMT 330 (348) Q Consensus 321 ~GAa~~~r~~ 330 (348) T Consensus 280 iGAA~lA~~~ 289 (291) T PRK05082 280 LGAALWAQGE 289 (291) T ss_pred HHHHHHHHHH T ss_conf 9699998624 |
|
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase); InterPro: IPR004654 This family describes one branch of the ROK superfamily of proteins that may have activity as glucokinase although many proteins are as yet uncharacterised | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=320.56 Aligned_cols=290 Identities=19% Similarity=0.232 Sum_probs=219.2 Q ss_pred EEEEECCCCEEEEEEECCCCEEEEEEEECCCCCC-CHHHHHHH----HHHH--CCCC---CCCEEEEEEEEEEEC--CCE Q ss_conf 9998575118999987799808899974388735-88999999----9972--2345---655469997304416--855 Q gi|254780280|r 16 LLADIGGTNVRFAILRSMESEPEFCCTVQTSDYE-NLEHAIQE----VIYR--KISI---RLRSAFLAIATPIGD--QKS 83 (348) Q Consensus 16 L~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~-~~~~~i~~----~l~~--~~~~---~~~~igi~v~Gpv~~--~~~ 83 (348) T Consensus 1 ~g~DiGGT~iklg~~de-~gnilskw~vpTd~t~~ti~~~ia~~~ds~~~~~~k~~htfs~i~~iGiGapGpVn~~~g~V 79 (326) T TIGR00744 1 LGVDIGGTTIKLGVVDE-EGNILSKWKVPTDTTDETIVVAIAKIVDSKLDELDKSDHTFSEIVAIGIGAPGPVNFEAGVV 79 (326) T ss_pred CEEECCCCEEEEEEEEC-CCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEE T ss_conf 91214564689888705-55603210059878843899999987412455420467644646676026888531556625 Q ss_pred EEECCCCCCCC--HHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEEC Q ss_conf 64213566669--8899998289855882126543200001586553530243455766675279931762022454310 Q gi|254780280|r 84 FTLTNYHWVID--PEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIR 161 (348) Q Consensus 84 ~~~~~~~~~~~--~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~ 161 (348) T Consensus 80 y~avNl~Wk~~~nlk~~~e~~vg~PvvveNDAN~AAlGE~~k-------------GaG~Ga~dVi~iTLGTGlGGGII~n 146 (326) T TIGR00744 80 YEAVNLDWKQEANLKEKLEAEVGLPVVVENDANVAALGEKKK-------------GAGDGAKDVILITLGTGLGGGIIAN 146 (326) T ss_pred ECCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHCCCCC-------------CCCCCCCCEEEEECCCCCCCEEEEC T ss_conf 015456666760366663230487569847323786401215-------------7999765258997578874607637 Q ss_pred CC--CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHH-HHHH---------HCCCCCCCC Q ss_conf 58--86301135678666676610234789999853189864877522223899999-9987---------408886436 Q gi|254780280|r 162 AK--DSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYK-ALCI---------ADGFESNKV 229 (348) Q Consensus 162 ~~--~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~-~l~~---------~~~~~~~~~ 229 (348) T Consensus 147 gei~hG~nG~gaEiGHir~~pdg~--------~~CnCGk~GCiE~~ASatg~Vr~akq~~~~k~~~a~~~l~L~~~tP~~ 218 (326) T TIGR00744 147 GEILHGHNGAGAEIGHIRVVPDGR--------LKCNCGKSGCIETVASATGVVRLAKQRAYAKLERAEKLLRLKDDTPDK 218 (326) T ss_pred CEEEECCCCCCCCCCCEEEECCCC--------CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC T ss_conf 756511023320205566505887--------215889887232214567899888753057546778887641378864 Q ss_pred CCHHH--HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHH Q ss_conf 98889--9883689579999999999999999999997489973899656776556772764899998837983788973 Q gi|254780280|r 230 LSSKD--IVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQ 307 (348) Q Consensus 230 ~~~~~--~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ 307 (348) T Consensus 219 ~sak~vf~AA~~gd~~a~~~~~~vA~~~g~~l~~las~~nPs~-ivlGGG~S~aG-~ll~-~~i~k~y~~~~f~~aW~q~ 295 (326) T TIGR00744 219 VSAKDVFEAAKEGDEVAVEVVEEVAKYLGLVLADLASLLNPSK-IVLGGGLSDAG-ELLL-DKIKKEYKKLLFGRAWRQA 295 (326) T ss_pred CCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCE-EEECCCCCCCC-HHHH-HHHHHHHHHCCCCCCCCHH T ss_conf 3133688984178917603588999999999877875238862-78767326221-3556-5444434311367654326 Q ss_pred CC-EEEEECCCCHHHHHHHHHHCC Q ss_conf 88-799957872277599987380 Q gi|254780280|r 308 IP-TYVITNPYIAIAGMVSYIKMT 330 (348) Q Consensus 308 ip-v~~~~~~~agl~GAa~~~r~~ 330 (348) T Consensus 296 adi~~AqLGNdAG~~GaA~la~~~ 319 (326) T TIGR00744 296 ADIVAAQLGNDAGVVGAADLAKTE 319 (326) T ss_pred HHHHHHHHCCCCCEECHHHHHHHH T ss_conf 789998606655302105788764 |
; GO: 0004340 glucokinase activity, 0006096 glycolysis, 0005737 cytoplasm. |
>PRK09557 fructokinase; Reviewed | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=306.96 Aligned_cols=286 Identities=17% Similarity=0.161 Sum_probs=206.5 Q ss_pred EEEEECCCCEEEEEEECCCCEEEEEEEECCCC--CCCHHHHHHHHHHHCC--CCCCCEEEEEEEEEEECCC-EEEECCCC Q ss_conf 99985751189999877998088999743887--3588999999997223--4565546999730441685-56421356 Q gi|254780280|r 16 LLADIGGTNVRFAILRSMESEPEFCCTVQTSD--YENLEHAIQEVIYRKI--SIRLRSAFLAIATPIGDQK-SFTLTNYH 90 (348) Q Consensus 16 L~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~--~~~~~~~i~~~l~~~~--~~~~~~igi~v~Gpv~~~~-~~~~~~~~ 90 (348) T Consensus 3 iGiDIGGT~i~~~lvd~~-G~il~~~~~~t~~~~~~~~~~~i~~li~~~~~~~~~~~~IGIg~PG~vd~~~G~v~~~~~~ 81 (301) T PRK09557 3 IGIDLGGTKIEVIALDDA-GEELFRKRLPTPRDDYQQTIEAIATLVDMAEQATGQRGTVGVGIPGVISPYTGLVKNANST 81 (301) T ss_pred EEEEECCCEEEEEEEECC-CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCCCC T ss_conf 999987320999999799-9799999987999887999999999999988763887769999207771999989668864 Q ss_pred CC--CCH-HHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCC--CC Q ss_conf 66--698-89999828985588212654320000158655353024345576667527993176202245431058--86 Q gi|254780280|r 91 WV--IDP-EELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAK--DS 165 (348) Q Consensus 91 ~~--~~~-~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~--~g 165 (348) T Consensus 82 ~~~~~~l~~~l~~~~~-~pV~v~NDanaaalgE~~~G-------------~~~g~~~~~~~tlGtGiGggiv~~G~l~~G 147 (301) T PRK09557 82 WLNGQPLDKDLSARLN-REVRLANDANCLAVSEAVDG-------------AAAGKQVVFAVIIGTGCGAGVAINGRVHIG 147 (301) T ss_pred CCCCCCHHHHHHHHHC-CCEEEECCHHHHHHHHHHHC-------------CCCCCCEEEEEEECCCCCCEEEECCEEECC T ss_conf 2168547999999879-98899461989999999838-------------778887399998525543069987817227 Q ss_pred CEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHH Q ss_conf 30113567866667661023478999985318986487752222389999999874088864369888998836895799 Q gi|254780280|r 166 WIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSEDPIAL 245 (348) Q Consensus 166 ~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~~~~~~D~~A~ 245 (348) T Consensus 148 ~~g~AGEiGH~~l~~~~~~~~~~~~~~~C~CG~~GclE~~~S~~~l~~~~~~~~~~~-----~~~~~i~~~a~~gd~~a~ 222 (301) T PRK09557 148 GNGIAGEWGHNPLPWMDEDEFRYRNETPCYCGKQGCIETFISGTGFATDYRRLSGKA-----LKGSEIIRLVEEGDPVAE 222 (301) T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHCCCC-----CCHHHHHHHHHCCCHHHH T ss_conf 887466657775654563212468886435788556888747699999999824898-----888999999987899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEE-ECCCCHHHHHH Q ss_conf 99999999999999999997489973899656776556772764899998837983788973887999-57872277599 Q gi|254780280|r 246 KAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVI-TNPYIAIAGMV 324 (348) Q Consensus 246 ~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~-~~~~agl~GAa 324 (348) T Consensus 223 ~~~~~~~~~l~~~la~~i~~ldPe~-IVlGGGvs~~-~~l~--~~l~~~l~~~-~~~~-~~~~~I~~a~lg~dAGiiGAA 296 (301) T PRK09557 223 LAFERYEDRLAKSLAHVINILDPDV-IVLGGGMSNV-DRLY--PTLPALLKQY-VFGG-ECETPVRKALHGDSSGVRGAA 296 (301) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCE-EEEECCCCCH-HHHH--HHHHHHHHHH-CCCC-CCCCEEEECCCCCHHHHHHHH T ss_conf 9999999999999985577339888-9996811167-8899--9999999976-0367-789808976736858664110 Q ss_pred HHH Q ss_conf 987 Q gi|254780280|r 325 SYI 327 (348) Q Consensus 325 ~~~ 327 (348) T Consensus 297 ~L~ 299 (301) T PRK09557 297 WLW 299 (301) T ss_pred HCC T ss_conf 325 |
|
>PRK13310 N-acetyl-D-glucosamine kinase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=304.87 Aligned_cols=286 Identities=19% Similarity=0.159 Sum_probs=203.5 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCC--CCCCHHHHHHHHHHHCCC--CCCCEEEEEEEEEEECCC-EEEECC- Q ss_conf 79998575118999987799808899974388--735889999999972234--565546999730441685-564213- Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTS--DYENLEHAIQEVIYRKIS--IRLRSAFLAIATPIGDQK-SFTLTN- 88 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~--~~~~~~~~i~~~l~~~~~--~~~~~igi~v~Gpv~~~~-~~~~~~- 88 (348) T Consensus 2 ~lGiDIGGT~i~~~l~d~-~g~i~~~~~~~Tp~~~~~~~~~~i~~~i~~~~~~~~~~~~iGig~pG~vd~~~g~v~~~n~ 80 (302) T PRK13310 2 YYGFDIGGTKIELGVFDE-KLELQWEKRVPTPRDSYDAFLDAVCELVAEADQRFGCKGSVGIGIPGMPETEDGTLYAANV 80 (302) T ss_pred EEEEEECCHHEEEEEEEC-CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCC T ss_conf 999991700499999978-9979999998799999999999999999998765588786999985765299988993698 Q ss_pred CCCC-CCH-HHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCC--C Q ss_conf 5666-698-89999828985588212654320000158655353024345576667527993176202245431058--8 Q gi|254780280|r 89 YHWV-IDP-EELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAK--D 164 (348) Q Consensus 89 ~~~~-~~~-~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~--~ 164 (348) T Consensus 81 ~~~~~~~l~~~L~~~~g-~pV~ieNDanaaalgE~~~G-------------~~~~~~~~~~v~lGTGiGggii~~G~l~~ 146 (302) T PRK13310 81 PAASGKPLRADLSARLG-RDVRLDNDANCFALSEAWDD-------------EFTQYPLVMGLILGTGVGGGLVFNGKPIS 146 (302) T ss_pred CCCCCCCHHHHHHHHHC-CCEEEECHHHHHHHHHHHHC-------------CCCCCCEEEEEEECCCCCCEEEECCEECC T ss_conf 64148975999999979-98899516879999988617-------------56899838999833775415998984746 Q ss_pred CCEECCCCCCCCCCCCCCHHHH-HHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHCCC Q ss_conf 6301135678666676610234-789999853189864877522223899999998740888643698889--9883689 Q gi|254780280|r 165 SWIPISCEGGHMDIGPSTQRDY-EIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKD--IVSKSED 241 (348) Q Consensus 165 g~~~~agE~Gh~~~~~~~~~~~-~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~D 241 (348) T Consensus 147 G~~g~AGEiGHi~v~~~~~~~~~~~~p~~~c~cG~~GclE~~~Sg~~l~~~~~~~~~~-------~~~~~~i~~~~~~gd 219 (302) T PRK13310 147 GRSYITGEFGHMRLPVDALTLLGLDAPLRRCGCGQKGCIENYLSGRGFEWLYQHYYGQ-------PLQAPEIIALYYQGD 219 (302) T ss_pred CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCC-------CCCHHHHHHHHHCCC T ss_conf 9887066765314167754345666665412467766334201489999999985089-------999899999998789 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEE-ECCCCHH Q ss_conf 579999999999999999999997489973899656776556772764899998837983788973887999-5787227 Q gi|254780280|r 242 PIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVI-TNPYIAI 320 (348) Q Consensus 242 ~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~-~~~~agl 320 (348) T Consensus 220 ~~A~~~i~~~~~~la~~la~~i~~ldPe~-iviGGGvs~~--~~l~-~~l~~~~~~~~-~-~~~~~~~I~~a~lG~~AGl 293 (302) T PRK13310 220 EQAVAHVERFLDLLAICLGNILTIVDPHL-VVLGGGLSNF--DAIY-EQLPKRLPRHL-L-PVARVPRIEKARHGDAGGV 293 (302) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECCCCCH--HHHH-HHHHHHHHHHH-C-CCCCCCEEEECCCCCHHHH T ss_conf 98999999999999999999999829888-9997862570--8899-99999999872-6-7477984897674687999 Q ss_pred HHHHHHHH Q ss_conf 75999873 Q gi|254780280|r 321 AGMVSYIK 328 (348) Q Consensus 321 ~GAa~~~r 328 (348) T Consensus 294 iGAA~L~L 301 (302) T PRK13310 294 RGAAFLHL 301 (302) T ss_pred HHHHHHHC T ss_conf 99998630 |
|
>PRK09698 D-allose kinase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=8.5e-43 Score=282.45 Aligned_cols=278 Identities=18% Similarity=0.195 Sum_probs=190.8 Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCC--CCHHHHHHHHHHH---CCCCCCCEEEEEEEEEEECCC--EEE Q ss_conf 737999857511899998779980889997438873--5889999999972---234565546999730441685--564 Q gi|254780280|r 13 FPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDY--ENLEHAIQEVIYR---KISIRLRSAFLAIATPIGDQK--SFT 85 (348) Q Consensus 13 ~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~--~~~~~~i~~~l~~---~~~~~~~~igi~v~Gpv~~~~--~~~ 85 (348) T Consensus 4 ~~viGIDiGGT~i~~~l~d~-~g~i~~~~~~~t~~~~~~~~~~~i~~~i~e~~~~~~~~i~gIgig~pG~vd~~~g~v~~ 82 (302) T PRK09698 4 NVVAGIDMGATHIRFCLVDA-EGEILHCEKRRTAEVIAPDLVSGISEMIDEQLRRFNARCHGLVMGFPALVSKDKRTIIS 82 (302) T ss_pred CEEEEEEECCCEEEEEEECC-CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEE T ss_conf 68999998732499999969-99799999966987676799999999999997651885246999958960599998983 Q ss_pred ECCCC---CC-CCHH-HHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEE Q ss_conf 21356---66-6988-9999828985588212654320000158655353024345576667527993176202245431 Q gi|254780280|r 86 LTNYH---WV-IDPE-ELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVI 160 (348) Q Consensus 86 ~~~~~---~~-~~~~-~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~ 160 (348) T Consensus 83 ~~nl~~~~~~~~~l~~~l~~~~~-~pv~veNDan~aa~~e~~~~--------------~~~~~~~~~~~lGtGiG~gii~ 147 (302) T PRK09698 83 TPNLPLTAADLYDLADKLENTLN-CPVFFSRDVNLQLSWDVVEN--------------RLTQQLVLGAYLGTGMGFAVWM 147 (302) T ss_pred CCCCCCCCCCCCCHHHHHHHHHC-CCEEEECCHHHHHHHHHHHC--------------CCCCCEEEEEEECCCCCCEEEE T ss_conf 38766666767746999999879-99899653768999999828--------------9888749999974632204897 Q ss_pred CCC--CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH Q ss_conf 058--863011356786666766102347899998531898648775222238999999987408886436988899883 Q gi|254780280|r 161 RAK--DSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSK 238 (348) Q Consensus 161 ~~~--~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~~~~ 238 (348) T Consensus 148 ~G~l~~G~~g~AGEiGHi~~~~~~~---------~c~cg~~GclE~~~S~~~l~~~~~~~~--------~~~~~~~~~~~ 210 (302) T PRK09698 148 NGAPWTGAHGVAGELGHIPLGDMTQ---------HCACGNPGCLETNCSGMALRRWYEQQP--------RNYPLEDLFVH 210 (302) T ss_pred CCEEEECCCCCCCCCCCEEECCCCC---------CCCCCCCCCHHHHHCHHHHHHHHHHCC--------CCCCHHHHHHH T ss_conf 4717746898788731247558998---------789999750799727999999997521--------79988999986 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHH-HHHCCEEEE-ECC Q ss_conf 689579999999999999999999997489973899656776556772764899998837983788-973887999-578 Q gi|254780280|r 239 SEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKEL-MRQIPTYVI-TNP 316 (348) Q Consensus 239 ~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~-l~~ipv~~~-~~~ 316 (348) T Consensus 211 ~~~---~~~~~~~~~~la~~ia~~i~~ldPe~-IViGGGv~~~~-~~~~-~~l~~~i~~~~-~~~~~~~~~~I~~a~Lg~ 283 (302) T PRK09698 211 AEN---APFVQSLLENAARAIATSINLFDPDA-VILGGGVMDME-AFPR-ETLIALIQKYL-RRPLPYQVVRFIAASSSD 283 (302) T ss_pred CCC---HHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECHHHCCC-HHHH-HHHHHHHHHHH-CCCCCCCCCEEEECCCCC T ss_conf 468---79999999999999999998648898-99901054060-5689-99999999985-365677786799778336 Q ss_pred CCHHHHHHHHHHCC Q ss_conf 72277599987380 Q gi|254780280|r 317 YIAIAGMVSYIKMT 330 (348) Q Consensus 317 ~agl~GAa~~~r~~ 330 (348) T Consensus 284 dAG~iGAA~La~~~ 297 (302) T PRK09698 284 FNGAQGAAILAHQR 297 (302) T ss_pred HHHHHHHHHHHHHH T ss_conf 59999999999998 |
|
>COG1940 NagC Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] | Back alignment and domain information |
---|
Probab=100.00 E-value=3.4e-38 Score=254.02 Aligned_cols=290 Identities=22% Similarity=0.227 Sum_probs=194.8 Q ss_pred CCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCC---CHHHHH----HHHHHHCCCCCCCEEEEEEEEEE--E Q ss_conf 76677379998575118999987799808899974388735---889999----99997223456554699973044--1 Q gi|254780280|r 9 FPIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYE---NLEHAI----QEVIYRKISIRLRSAFLAIATPI--G 79 (348) Q Consensus 9 ~~~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~---~~~~~i----~~~l~~~~~~~~~~igi~v~Gpv--~ 79 (348) T Consensus 2 ~~~~~~~lgidIggt~i~~~l~d~~-g~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~-~~~~~iGIgi~~pg~~~ 79 (314) T COG1940 2 NPEAMTVLGIDIGGTKIKVALVDLD-GEILLRERIPTPTPDPEEAILEAILALVAELLKQAQ-GRVAIIGIGIPGPGDVD 79 (314) T ss_pred CCCCEEEEEEEECCCEEEEEEEECC-CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC-CCCCEEEEEEEEEEECC T ss_conf 9876299999988978999999379-978988998778888456799999999999987527-67756999997646126 Q ss_pred CCC-EEEECCCCCC--CCHHH-HHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEE Q ss_conf 685-5642135666--69889-9998289855882126543200001586553530243455766675279931762022 Q gi|254780280|r 80 DQK-SFTLTNYHWV--IDPEE-LISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLG 155 (348) Q Consensus 80 ~~~-~~~~~~~~~~--~~~~~-l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g 155 (348) T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~Pv~veNDan~aAlaE~~~g~-------------~~~~~~~~~i~~gtGIG 145 (314) T COG1940 80 NGTVIVPAPNLGWWNGVDLAEELEARLG-LPVFVENDANAAALAEAWFGA-------------GRGIDDVVYITLGTGIG 145 (314) T ss_pred CCCEEECCCCCCCCCCCCHHHHHHHHHC-CCEEEECCHHHHHHHHHHHCC-------------CCCCCEEEEEEECCCEE T ss_conf 8736742576654446779999999889-987992519999999987287-------------77887499999899748 Q ss_pred EEEEECCC--CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH-HHHHHHCCCCCC-CCCC Q ss_conf 45431058--8630113567866667661023478999985318986487752222389999-999874088864-3698 Q gi|254780280|r 156 ISSVIRAK--DSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIY-KALCIADGFESN-KVLS 231 (348) Q Consensus 156 ~~~~~~~~--~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y-~~l~~~~~~~~~-~~~~ 231 (348) T Consensus 146 ~giv~~g~l~~G~~g~aGe~Gh~~v~~~g~----------c~cG~~GclE~~as~~al~~~~~~~~~----~~~~~~~~~ 211 (314) T COG1940 146 GGIIVNGKLLRGANGNAGEIGHMVVDPDGE----------CGCGRRGCLETYASGRAILRRAAEALE----SEAGELTAK 211 (314) T ss_pred EEEEECCEECCCCCCCCCCCCCCEECCCCC----------CCCCCCCCHHHHCCHHHHHHHHHHHCC----CCCCCCCHH T ss_conf 999989975058998676058713168886----------668887707663077999986432014----444567899 Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC-HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCE Q ss_conf 889988368957999999999999999999999748997389965-6776556772764899998837983788973887 Q gi|254780280|r 232 SKDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISG-GIPYKIIDLLRNSSFRESFENKSPHKELMRQIPT 310 (348) Q Consensus 232 ~~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgG-Gi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv 310 (348) T Consensus 212 ~i~~~a~~gd~~a~~~~~~~~~~la~~ianl~~~~~P~~-IvigG~~~~~~~~~~~~--~l~~~~~~~~-~~~~~~~~~~ 287 (314) T COG1940 212 DIFELAAAGDPLAKEVIERAADYLARGLANLINLLDPEV-IVIGGGGVSALGDLLLP--RLRKLLAKYL-FPPVLRPRIV 287 (314) T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECCCHHHHHHHHHH--HHHHHHHHHC-CCCCCCCCEE T ss_conf 999998758988999999999999999999999739974-99979645666788999--9999987640-3210234201 Q ss_pred EEEEC-CCCHHHHHHHHHHCCCC Q ss_conf 99957-87227759998738001 Q gi|254780280|r 311 YVITN-PYIAIAGMVSYIKMTDC 332 (348) Q Consensus 311 ~~~~~-~~agl~GAa~~~r~~~~ 332 (348) T Consensus 288 ~~~~~~~~a~~~ga~~~~~~~~~ 310 (314) T COG1940 288 EAALGGNDAGLIGAALLALLLLL 310 (314) T ss_pred EHHCCCCCHHHHHHHHHHHHHHH T ss_conf 00015643325648988754222 |
|
>pfam01869 BcrAD_BadFG BadF/BadG/BcrA/BcrD ATPase family | Back alignment and domain information |
---|
Probab=99.54 E-value=1.8e-11 Score=88.92 Aligned_cols=270 Identities=13% Similarity=0.077 Sum_probs=124.0 Q ss_pred EEEEECCCCEEEEEEECCCCEEEEEEEECCCCCC--C-------HHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEE Q ss_conf 9998575118999987799808899974388735--8-------899999999722345655469997304416855642 Q gi|254780280|r 16 LLADIGGTNVRFAILRSMESEPEFCCTVQTSDYE--N-------LEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTL 86 (348) Q Consensus 16 L~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~--~-------~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~ 86 (348) T Consensus 1 lGID~GgTkt~~vl~d~~-g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~g~~~~~i~~~~~~g~g~~~----- 74 (288) T pfam01869 1 LGIDGGSTSTKAVLMDDD-GEVLGRAKSGSANIESVGVEAAVRNLKDAISEALKEAGLDPEDIDYIGVTGYGLAG----- 74 (288) T ss_pred CEEEECHHHEEEEEEECC-CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEEECCCC----- T ss_conf 969967234799999299-98999997578886668999999999999999999749985560389898766222----- Q ss_pred CCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCC Q ss_conf 13566669889999828985588212654320000158655353024345576667527993176202245431058863 Q gi|254780280|r 87 TNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSW 166 (348) Q Consensus 87 ~~~~~~~~~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~ 166 (348) T Consensus 75 --~~-~~~~~~~~~~~-~~~v~v~~d~~~al~~~~------------------~~--~giv~IaGTGS~~~~~-~--~G~ 127 (288) T pfam01869 75 --VD-GEFADKIVREI-FEEITVHTDGAVALAPAA------------------RG--DGVIDIGGTGSKVIGI-D--DGK 127 (288) T ss_pred --CC-HHHHHHHHHCC-CEEEEEECCHHHHHCCCC------------------CC--CEEEEECCCCCEEEEE-E--CCE T ss_conf --44-26589986503-507999806588823668------------------89--7389984888559999-4--998 Q ss_pred EECCCCCCCCCCCCCCHHHH--HHHHHHHHHCCCCC---CHHHHHCCHHHHHHHHHHHHHCCCCC--CCCCCHHHHHHHC Q ss_conf 01135678666676610234--78999985318986---48775222238999999987408886--4369888998836 Q gi|254780280|r 167 IPISCEGGHMDIGPSTQRDY--EIFPHLTERAEGRL---SAENLLSGKGLVNIYKALCIADGFES--NKVLSSKDIVSKS 239 (348) Q Consensus 167 ~~~agE~Gh~~~~~~~~~~~--~~~~~l~~~~g~~~---~~E~~~SG~gl~~~y~~l~~~~~~~~--~~~~~~~~~~~~~ 239 (348) T Consensus 128 ~~~~gg~G~~~gd~Gsg~~ig~~aL~~~~~~~d~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~fa~~v~~~a~~ 207 (288) T pfam01869 128 VVRFGGNGFCAGDEGSFLEIAARALGIVLRELDGLAAKTTLTDVVMKALVDDLIRVAYRPAAINSDCAVFAEQVVISALS 207 (288) T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHC T ss_conf 98855788774886759999999998899986397877724688988603214566642456513678988999999983 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEE-ECCC Q ss_conf 895799999999999999999999974899-73899656776556772764899998837983788973887999-5787 Q gi|254780280|r 240 EDPIALKAINLFCEYLGRVAGDLALIFMAR-GGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVI-TNPY 317 (348) Q Consensus 240 ~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~-~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~-~~~~ 317 (348) T Consensus 208 gd~~a~~Il~~~~~~la~~~~~~~~~l~~~~~~vvl~GGv~~~-------~~~~~~~~~~--l~~~~~~~~v~~~~~~~~ 278 (288) T pfam01869 208 GGIKAEDILAGAAESIALRVAALIKRLGPVPDQVVLTGGVAKN-------EVLVKALRDE--LSEKILEVKVNVPPDPQY 278 (288) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHCC-------HHHHHHHHHH--HHHHCCCCCEECCCCCCH T ss_conf 9922999999999999999999998438899979998941315-------9999999999--997557994762898663 Q ss_pred CHHHHHHHHH Q ss_conf 2277599987 Q gi|254780280|r 318 IAIAGMVSYI 327 (348) Q Consensus 318 agl~GAa~~~ 327 (348) T Consensus 279 ~~A~GAal~A 288 (288) T pfam01869 279 AGAIGAALLA 288 (288) T ss_pred HHHHHHHHCC T ss_conf 6599999739 |
This family includes the BadF and BadG proteins, which are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis. The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase. A member from Aquifex aeolicus contains two copies of this region suggesting that the family may structurally dimerize. This family appears to be related to pfam00370. |
>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
---|
Probab=99.17 E-value=1.1e-08 Score=71.85 Aligned_cols=270 Identities=16% Similarity=0.064 Sum_probs=131.6 Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCC---------CCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCE Q ss_conf 737999857511899998779980889997438873---------58899999999722345655469997304416855 Q gi|254780280|r 13 FPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDY---------ENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKS 83 (348) Q Consensus 13 ~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~---------~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~ 83 (348) T Consensus 5 ~~~lGVDGGGTkt~a~l~~-~~g~vlg~g~sGpAN~~~~~~e~A~~ni~~ai~~A~~~a-G~~~~~i~~~~agla~ag~~ 82 (301) T COG2971 5 PYFLGVDGGGTKTRAVLAD-EDGNVLGRGKSGPANIQLVGKEEAVRNIKDAIREALDEA-GLKPDEIAAIVAGLALAGAN 82 (301) T ss_pred CEEEEECCCCCCEEEEEEC-CCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHC-CCCHHHHCCEEEEEECCCCC T ss_conf 2799985687636899975-897589775168852135636789999999999998762-89977817012455035766 Q ss_pred EEECCCCCCCCHHHHHHHHCCC-CEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECC Q ss_conf 6421356666988999982898-558821265432000015865535302434557666752799317620224543105 Q gi|254780280|r 84 FTLTNYHWVIDPEELISRMQFE-DVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRA 162 (348) Q Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~-~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~ 162 (348) T Consensus 83 ~-------~~~~~~~~~~l~~a~~v~v~~Dg~iAl~ga~-----------------~~~~Gi--i~i~GTGSi~~~~~-- 134 (301) T COG2971 83 V-------EEAREELERLLPFAGKVDVENDGLIALRGAL-----------------GDDDGI--IVIAGTGSIGYGRK-- 134 (301) T ss_pred H-------HHHHHHHHHHCCCCCEEEEECCHHHHHHHCC-----------------CCCCCE--EEEECCCEEEEEEE-- T ss_conf 2-------6778889873686646999557699986132-----------------799878--99925876999970-- Q ss_pred CCCCEECCCCCCCCCCCCCCH--HHHH-HHHHHHHHCCCC-CC--HHHHHCCHHH--HHHHHHHHHHCCCC--CCCCCCH Q ss_conf 886301135678666676610--2347-899998531898-64--8775222238--99999998740888--6436988 Q gi|254780280|r 163 KDSWIPISCEGGHMDIGPSTQ--RDYE-IFPHLTERAEGR-LS--AENLLSGKGL--VNIYKALCIADGFE--SNKVLSS 232 (348) Q Consensus 163 ~~g~~~~agE~Gh~~~~~~~~--~~~~-~~~~l~~~~g~~-~~--~E~~~SG~gl--~~~y~~l~~~~~~~--~~~~~~~ 232 (348) T Consensus 135 -gg~~~r~GG~Gf~IgDegSga~ig~~~L~~~lra~DG~~~~t~L~d~v~~~f~~d~edlv~~~y~a~~~~~~ia~lap~ 213 (301) T COG2971 135 -GGRRERVGGWGFPIGDEGSGAWIGREALQEALRAFDGRREATPLTDAVMAEFNLDPEDLVAFIYKAGPGDKKIAALAPA 213 (301) T ss_pred -CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH T ss_conf -8866775686751156520779999999999997468766870799999995899999999998658856779886199 Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEE Q ss_conf 89988368957999999999999999999999748997389965677655677276489999883798378897388799 Q gi|254780280|r 233 KDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYV 312 (348) Q Consensus 233 ~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~ 312 (348) T Consensus 214 V~~~A~~GD~~A~~Il~~aa~~i~~~~~~l~-~~~g~~~l~l~GG~~~~~~~~~~--~~~~~l~~~-----------~-- 277 (301) T COG2971 214 VFEAARKGDPVAIRILKEAAAYIATLLEALS-IFNGSEKLSLLGGLAPSYPYYLS--LFRRALLVP-----------P-- 277 (301) T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH-CCCCCCEEEEECCCCCCCHHHHH--HHHHHHCCC-----------C-- T ss_conf 9999972899999999999999999999984-22687249984444323403677--789985587-----------4-- Q ss_pred EECCCCHHHHHHHHHHCCCC Q ss_conf 95787227759998738001 Q gi|254780280|r 313 ITNPYIAIAGMVSYIKMTDC 332 (348) Q Consensus 313 ~~~~~agl~GAa~~~r~~~~ 332 (348) T Consensus 278 ---~~D~~~GA~~~A~~~~~ 294 (301) T COG2971 278 ---IGDALSGAVLLALGRFG 294 (301) T ss_pred ---CCCHHHHHHHHHHHHHH T ss_conf ---31177789998777541 |
|
>COG5026 Hexokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
---|
Probab=98.89 E-value=5e-07 Score=61.52 Aligned_cols=293 Identities=17% Similarity=0.111 Sum_probs=140.2 Q ss_pred CCCEEEEEECCCCEEEEEEECC-CCEE--EEEE-EEC--CCCCCCHH-------HHHHHHHHHCCC---CCCCEEEEEEE Q ss_conf 7737999857511899998779-9808--8999-743--88735889-------999999972234---56554699973 Q gi|254780280|r 12 AFPVLLADIGGTNVRFAILRSM-ESEP--EFCC-TVQ--TSDYENLE-------HAIQEVIYRKIS---IRLRSAFLAIA 75 (348) Q Consensus 12 ~~~vL~iDIGGT~ir~glv~~~-~~~i--~~~~-~~~--t~~~~~~~-------~~i~~~l~~~~~---~~~~~igi~v~ 75 (348) T Consensus 74 ~g~~LaiD~GGTnlRvc~V~l~g~gt~~~~~sks~lp~e~~~~~~~~~l~~~iadrl~~fi~~~~~~~~~~~l~~gfTFS 153 (466) T COG5026 74 SGSVLAIDLGGTNLRVCLVVLGGDGTFDIEQSKSFLPVECRDSESRDELFGFIADRLAAFIKEQHPSGYGSKLPIGFTFS 153 (466) T ss_pred CCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEEEE T ss_conf 78789996289558999999689997210137444806651677768899999999999998748010167320368985 Q ss_pred EEEE-----CCCEEEECCCCCCCCH-------HHHHHHH---C--CCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCC Q ss_conf 0441-----6855642135666698-------8999982---8--98558821265432000015865535302434557 Q gi|254780280|r 76 TPIG-----DQKSFTLTNYHWVIDP-------EELISRM---Q--FEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDN 138 (348) Q Consensus 76 Gpv~-----~~~~~~~~~~~~~~~~-------~~l~~~~---~--~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~ 138 (348) T Consensus 154 YP~~q~sin~g~l~rwT-Kgf~i~e~ig~dvv~~l~e~l~~r~~pi~v~aviNDttgtlla~~y---------------t 217 (466) T COG5026 154 YPLNQTSINEGQLIRWT-KGFDIPEVIGTDVVRLLQEALSARNLPIRVVAVINDTTGTLLASVY---------------T 217 (466) T ss_pred CCCCCCCCCCEEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHH---------------C T ss_conf 11244345861567521-4676256530328999999887559854799886151888777742---------------5 Q ss_pred CCCCCCEEEECCCCEEEEEEEECC------------CCCCEECCCCCCCCCC----CCCCHHHHHHHHHHHHHCCCCCCH Q ss_conf 666752799317620224543105------------8863011356786666----766102347899998531898648 Q gi|254780280|r 139 RSLFSSRVIVGPGTGLGISSVIRA------------KDSWIPISCEGGHMDI----GPSTQRDYEIFPHLTERAEGRLSA 202 (348) Q Consensus 139 ~~~~~~~~~ig~GtG~g~~~~~~~------------~~g~~~~agE~Gh~~~----~~~~~~~~~~~~~l~~~~g~~~~~ 202 (348) T Consensus 218 ~--~~~~iG~IfGTGtN~~y~e~~~~ipkl~~d~~~~~~pm~iN~EwGsfdn~~~~Lp~t~ydv~idq--~s~~pg~~~~ 293 (466) T COG5026 218 S--SETIIGIIFGTGTNGCYCEPKGRIPKLPRDDLPETGPMLINCEWGSFDNELSVLPRTKYDVLIDQ--ESPNPGHQIF 293 (466) T ss_pred C--CCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCEEEEECC--CCCCCCHHHH T ss_conf 7--88758999806866157743366776764344455874798403665763243354320046236--7887346787 Q ss_pred HHHHCCHHHHHHHHHH--------HHHCCCCCCC---------------------CCCHHHH-----HHHCCCHH----- Q ss_conf 7752222389999999--------8740888643---------------------6988899-----88368957----- Q gi|254780280|r 203 ENLLSGKGLVNIYKAL--------CIADGFESNK---------------------VLSSKDI-----VSKSEDPI----- 243 (348) Q Consensus 203 E~~~SG~gl~~~y~~l--------~~~~~~~~~~---------------------~~~~~~~-----~~~~~D~~----- 243 (348) T Consensus 294 Ek~~sG~yLGellr~~L~~l~~qg~~~~~q~~~~~~~p~~l~t~~~s~i~~D~~~nl~~t~~~f~~~~~~~tt~eer~lI 373 (466) T COG5026 294 EKMSSGMYLGELLRLILRNLYEQGLIFNGQDPEKLTDPFALSTSVLSRIEEDPFENLRNTLTTFLNDFRAPTTKEERKLI 373 (466) T ss_pred HHHHCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEECCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH T ss_conf 66605424799999999999887763156562330564256321222002465556410377888875489977999999 Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHC--CCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHH--HCCEEEEECC Q ss_conf ---999999999999999999999748--997389965677655677276489999883798378897--3887999578 Q gi|254780280|r 244 ---ALKAINLFCEYLGRVAGDLALIFM--ARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMR--QIPTYVITNP 316 (348) Q Consensus 244 ---A~~~~~~~~~~lg~~i~~l~~~~~--p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~--~ipv~~~~~~ 316 (348) T Consensus 374 ~~l~~~i~~RAArlaa~~iaAi~~ktG~~k~~~v~~dGsv~e~y------p~f~~~~~~~--l~~~~g~~~~~i~i~~a~ 445 (466) T COG5026 374 RRLVELIGRRAARLAAVPIAAIVIKTGAYKAYHVGADGSVIERY------PGFRSMLREA--LKALLGEEGEKIKIKPAE 445 (466) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHC------HHHHHHHHHH--HHHHHCCCCCEEEEEECC T ss_conf 99999998766788765677766551787661030003313216------5579999999--887641347635678614 Q ss_pred CCHHHHHH--HHHHCCCC Q ss_conf 72277599--98738001 Q gi|254780280|r 317 YIAIAGMV--SYIKMTDC 332 (348) Q Consensus 317 ~agl~GAa--~~~r~~~~ 332 (348) T Consensus 446 dgsglGAAl~a~~~~k~~ 463 (466) T COG5026 446 DGSGLGAALCALLAQKPK 463 (466) T ss_pred CCCCHHHHHHHHHHCCCC T ss_conf 686067999998740431 |
|
>PTZ00107 hexokinase; Provisional | Back alignment and domain information |
---|
Probab=98.88 E-value=4.5e-06 Score=55.63 Aligned_cols=289 Identities=16% Similarity=0.130 Sum_probs=137.8 Q ss_pred EEEEEECCCCEEEEEEECCCC-EEE-EEEEE---------C------CCCCCCH----HHHHHHHHHHCC----CCCCCE Q ss_conf 799985751189999877998-088-99974---------3------8873588----999999997223----456554 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMES-EPE-FCCTV---------Q------TSDYENL----EHAIQEVIYRKI----SIRLRS 69 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~-~i~-~~~~~---------~------t~~~~~~----~~~i~~~l~~~~----~~~~~~ 69 (348) T Consensus 98 fLALDLGGTNfRV~~V~L~G~g~~~~~q~~~~i~~~~~~~p~~l~~~~gt~~eLFdfIA~~i~~Fl~e~~~~~~~~~~lp 177 (485) T PTZ00107 98 YYAIDFGGSNFRAVRISIDGDGKMERNQSTFSLRYSSALGPKGLLDQKATATELFDHFAKKIEHVMGESGVDPDPSEPHK 177 (485) T ss_pred EEEECCCCCCEEEEEEEEECCCCEEEEEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC T ss_conf 99992488847999999958984366455788530224686677516685999999999999999998387767886345 Q ss_pred EEEEEEEEEECCCEEEECCCCCC--C-------------CHHH-HHHHH-----CCCCEEEECHHHHHHHHHCCCCHHHH Q ss_conf 69997304416855642135666--6-------------9889-99982-----89855882126543200001586553 Q gi|254780280|r 70 AFLAIATPIGDQKSFTLTNYHWV--I-------------DPEE-LISRM-----QFEDVLLINDFEAQALAICSLSCSNY 128 (348) Q Consensus 70 igi~v~Gpv~~~~~~~~~~~~~~--~-------------~~~~-l~~~~-----~~~~v~i~ND~~a~a~~~~~~~~~~~ 128 (348) T Consensus 178 LGFTFSFP~~Qtsi~~G~Li~WTKGF~~~~a~~~gVeGkDVv~lL~~Ai~r~~l~v~V~AlvNDTVGTL~a~aY~~---- 253 (485) T PTZ00107 178 VGFTFSFPCTMLSPCNAILLDWTKGFETGRATNDQVEGRDVGKLMNEAFKRNNINAEVSIVLNDTVGTLMSCAYQK---- 253 (485) T ss_pred CEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCC---- T ss_conf 3479857245677573698641475045766678877661799999999834998149999950788776654047---- Q ss_pred HHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECC-----CCCCEECCCCCCCCCC-CCCCHHHHHHHHHHHHHCCCCCCH Q ss_conf 5302434557666752799317620224543105-----8863011356786666-766102347899998531898648 Q gi|254780280|r 129 VSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRA-----KDSWIPISCEGGHMDI-GPSTQRDYEIFPHLTERAEGRLSA 202 (348) Q Consensus 129 ~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~-----~~g~~~~agE~Gh~~~-~~~~~~~~~~~~~l~~~~g~~~~~ 202 (348) T Consensus 254 ---------~~~~~~~~IG~I~GTGtNacY~E~~~~~~~~~g-~iINtEWG~F~~~lp~T~~D~~lD~--~S~nPG~Q~f 321 (485) T PTZ00107 254 ---------PKDYPPCRVGVILGTGFNICYEEDEYKRYGYVG-KVINIECGNFDKELPLNPVDFEIDW--YTSNRGRGKL 321 (485) T ss_pred ---------CCCCCCEEEEEEEECCCCCEEEEHHHHCCCCCC-CEEEEEECCCCCCCCCCHHHHHHHH--CCCCCCCCCH T ss_conf ---------888866169999835611156404333147778-8788520158998888788898753--5899886412 Q ss_pred HHHHCCHHHHHHHHHH-HHHCCCCCCC------CCC-----------------HHHHHHHCC------------CHHHHH Q ss_conf 7752222389999999-8740888643------698-----------------889988368------------957999 Q gi|254780280|r 203 ENLLSGKGLVNIYKAL-CIADGFESNK------VLS-----------------SKDIVSKSE------------DPIALK 246 (348) Q Consensus 203 E~~~SG~gl~~~y~~l-~~~~~~~~~~------~~~-----------------~~~~~~~~~------------D~~A~~ 246 (348) T Consensus 322 EKmISGmYLGEIvRlvll~l~~~~~~~~l~~~~~~~T~~~S~Ie~D~s~~l~~~~~~l~~~~~i~~t~~d~~~vr~ic~~ 401 (485) T PTZ00107 322 EKLIAGAYLGEIIRRFMILYLREQAPPKMWEIGTFTSVDASEILNDNSEDFEISRQVAKRAWDVELPKESLIALRKICEA 401 (485) T ss_pred HHHHHHCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH T ss_conf 45553304899999999998742496654479875533688885189840899999999834999998999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHCC----CCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHH-HHC--CEEEEECCCCH Q ss_conf 9999999999999999997489----9738996567765567727648999988379837889-738--87999578722 Q gi|254780280|r 247 AINLFCEYLGRVAGDLALIFMA----RGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELM-RQI--PTYVITNPYIA 319 (348) Q Consensus 247 ~~~~~~~~lg~~i~~l~~~~~p----~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l-~~i--pv~~~~~~~ag 319 (348) T Consensus 402 V~~RaArL~AagIaai~~k~~~~~~~~~~VgVDGSvy~~~------P~F~~~l~e~--l~~l~~~~~~~~v~~~~a~DGS 473 (485) T PTZ00107 402 AFGRSAGLAAASICATARKAKAYVTSKTTCAVDGSLYVKN------EWYRNRLQYY--LDKVTRPDLVGNVVLLSSDDGS 473 (485) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECEEEECC------CCHHHHHHHH--HHHHHCCCCCCCEEEEECCCCC T ss_conf 9999999999999999997154556872999808405157------2878999999--9998376767618999667873 Q ss_pred HHHHHHHH Q ss_conf 77599987 Q gi|254780280|r 320 IAGMVSYI 327 (348) Q Consensus 320 l~GAa~~~ 327 (348) T Consensus 474 GvGAALiA 481 (485) T PTZ00107 474 GKGAAIAA 481 (485) T ss_pred HHHHHHHH T ss_conf 79999999 |
|
>KOG1794 consensus | Back alignment and domain information |
---|
Probab=98.83 E-value=2.1e-06 Score=57.72 Aligned_cols=282 Identities=14% Similarity=0.022 Sum_probs=141.3 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEE-ECCCCC--------CCHHHHHHHHHHHCC---CCCCCEEEEEEEEEEECCC Q ss_conf 7999857511899998779980889997-438873--------588999999997223---4565546999730441685 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCT-VQTSDY--------ENLEHAIQEVIYRKI---SIRLRSAFLAIATPIGDQK 82 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~-~~t~~~--------~~~~~~i~~~l~~~~---~~~~~~igi~v~Gpv~~~~ 82 (348) T Consensus 5 y~GvEGgaT~s~~Vivd~~-~~~~~~a~~~~Tnh~~ig~~~~~~rie~~i~~A~~k~g~d~~~~lr~lgL~lSg-~d~e~ 82 (336) T KOG1794 5 YGGVEGGATCSRLVIVDED-GTILGRAVGGGTNHWLIGSTTCASRIEDMIREAKEKAGWDKKGPLRSLGLGLSG-TDQED 82 (336) T ss_pred EEEECCCCCEEEEEEECCC-CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC-CCCHH T ss_conf 6753178542489998899-887667512654444578468999999999998866399845761014563146-77446 Q ss_pred EEEECCCCCCCCHHHHHHHHCC--CCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEE Q ss_conf 5642135666698899998289--85588212654320000158655353024345576667527993176202245431 Q gi|254780280|r 83 SFTLTNYHWVIDPEELISRMQF--EDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVI 160 (348) Q Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~--~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~ 160 (348) T Consensus 83 ~~-------~~lv~~~R~~fps~ae~~~v~sDa~~sl~a~t----------------~g--~~~GiVLiaGTgs~crl~~ 137 (336) T KOG1794 83 KN-------RKLVTEFRDKFPSVAENFYVTSDADGSLAAAT----------------PG--GEGGIVLIAGTGSNCRLVN 137 (336) T ss_pred HH-------HHHHHHHHHHCCCHHHEEEEEHHHHHHHHHCC----------------CC--CCCCEEEEECCCCEEEEEC T ss_conf 78-------89999998845023150466115777875248----------------77--7786799953785048888 Q ss_pred CCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH-----------HCCHHHHHHHHHHHHHCCCCCCCC Q ss_conf 058863011356786666766102347899998531898648775-----------222238999999987408886436 Q gi|254780280|r 161 RAKDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENL-----------LSGKGLVNIYKALCIADGFESNKV 229 (348) Q Consensus 161 ~~~~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~-----------~SG~gl~~~y~~l~~~~~~~~~~~ 229 (348) T Consensus 138 ~--DGs~~~~ggwg~~iGd~GSayw-ia~~Avq~vfda~dg~e~~~~~i~~v~~tif~~~~l~d~l~ml~~~Ys~f~k~r 214 (336) T KOG1794 138 P--DGSEKGAGGWGHMIGDGGSAYW-IARQAVQMVFDAEDGFENMMDKIKDVKQTIFKHFNLRDRLQMLEHLYSDFDKHR 214 (336) T ss_pred C--CCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHEEEHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH T ss_conf 9--8882679988774388852001-145333420223037433433177999999998089977888778772601788 Q ss_pred C----CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------CEEEECHHHHHHHHHHCCHHHHHHHHHCC Q ss_conf 9----8889988368957999999999999999999999748997------38996567765567727648999988379 Q gi|254780280|r 230 L----SSKDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARG------GVYISGGIPYKIIDLLRNSSFRESFENKS 299 (348) Q Consensus 230 ~----~~~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~------~IvlgGGi~~~~~~~l~~~~f~~~f~~~~ 299 (348) T Consensus 215 iA~f~~kla~~ae~Gd~~~~~ifr~Ag~~Lg~~V~aVl~~l~~~~k~g~~l~Iv~vG~V~~Sw~------~l~~Gfl~sl 288 (336) T KOG1794 215 IALFTEKLAEHAEIGDPLSAEIFRNAGETLGRHVVAVLPQLPPTLKKGKTLPIVCVGGVFDSWD------LLQEGFLDSL 288 (336) T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEECCHHHHHH------HHHHHHHHHH T ss_conf 9998999985201267889999999899999999999764690220367512999810665789------9998878876 Q ss_pred CHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCCC Q ss_conf 83788973887999578722775999873800124 Q gi|254780280|r 300 PHKELMRQIPTYVITNPYIAIAGMVSYIKMTDCFN 334 (348) Q Consensus 300 ~~~~~l~~ipv~~~~~~~agl~GAa~~~r~~~~~~ 334 (348) T Consensus 289 s~~~~f~~--~~l~~~k~ssAvgAA~laa~~~~~~ 321 (336) T KOG1794 289 SDTRGFER--VELYRPKESSAVGAAILAASLDNIE 321 (336) T ss_pred HCCCCCCC--EEEEEECCCCHHHHHHHHHHHCCCC T ss_conf 30367663--3899633650578899761001553 |
|
>KOG1369 consensus | Back alignment and domain information |
---|
Probab=98.77 E-value=3.7e-06 Score=56.12 Aligned_cols=291 Identities=15% Similarity=0.078 Sum_probs=143.3 Q ss_pred CEEEEEECCCCEEEEEEECCCCE---EEEEEEE--CCC----CCCCHHHH----HHHHHHHCCC-CCC-CEEEEEEEEEE Q ss_conf 37999857511899998779980---8899974--388----73588999----9999972234-565-54699973044 Q gi|254780280|r 14 PVLLADIGGTNVRFAILRSMESE---PEFCCTV--QTS----DYENLEHA----IQEVIYRKIS-IRL-RSAFLAIATPI 78 (348) Q Consensus 14 ~vL~iDIGGT~ir~glv~~~~~~---i~~~~~~--~t~----~~~~~~~~----i~~~l~~~~~-~~~-~~igi~v~Gpv 78 (348) T Consensus 87 ~~lalDLGGTn~Rv~~v~L~g~~~~~~~~~~~~~ip~~~m~gt~~~Lfd~Ia~~l~~F~~~~~~~~~~~l~lgFTFSfP~ 166 (474) T KOG1369 87 KFLALDLGGTNFRVLLVKLGGGRTSVRMYNKIYAIPEEIMQGTGEELFDFIARCLADFLDKMGLKGASKLPLGFTFSFPC 166 (474) T ss_pred CEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE T ss_conf 77999618983699999966996421465436866889970862889999999999999985626665534404895350 Q ss_pred EC---CCEEEECCCCCC-CCH-------HHHH---HHHCC---CCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC Q ss_conf 16---855642135666-698-------8999---98289---8558821265432000015865535302434557666 Q gi|254780280|r 79 GD---QKSFTLTNYHWV-IDP-------EELI---SRMQF---EDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSL 141 (348) Q Consensus 79 ~~---~~~~~~~~~~~~-~~~-------~~l~---~~~~~---~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~ 141 (348) T Consensus 167 ~Q~si~~g~L~~wTkGf~~~~~~g~Dvv~~L~eal~rr~~~~i~V~AlvNDTvGtl~~~~-----------------y~~ 229 (474) T KOG1369 167 RQTSIDKGTLIRWTKGFKATDCEGEDVVRLLREAIKRRGLFDMDVVAVVNDTVGTLMTCA-----------------YED 229 (474) T ss_pred EECCCCCCEEEEECCCCCCHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHCE-----------------ECC T ss_conf 305556535888416664466406209999999999728863589999946787674213-----------------168 Q ss_pred CCCEEEECCCCEEEEEEEECCCC--------C--CEECCCCCCCCC----CCCCCHHHHHHHHHHHHHCCCCCCHHHHHC Q ss_conf 75279931762022454310588--------6--301135678666----676610234789999853189864877522 Q gi|254780280|r 142 FSSRVIVGPGTGLGISSVIRAKD--------S--WIPISCEGGHMD----IGPSTQRDYEIFPHLTERAEGRLSAENLLS 207 (348) Q Consensus 142 ~~~~~~ig~GtG~g~~~~~~~~~--------g--~~~~agE~Gh~~----~~~~~~~~~~~~~~l~~~~g~~~~~E~~~S 207 (348) T Consensus 230 ~~~~igvI~GTGtNacY~e~~~~i~k~~~~~~~~~miIN~EWG~F~~~~~~l~~T~yD~~vD~--eS~npG~~~~EKmis 307 (474) T KOG1369 230 PNCEIGVIFGTGTNACYMEDMRNIEKVEGDAGRGPMCINTEWGAFGDNSLDLPRTEYDVVVDE--ESLNPGKQLFEKMIS 307 (474) T ss_pred CCCEEEEEECCCCCCEEEEECCCHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHH--HCCCCCHHHHHHHHC T ss_conf 995799998777552013663541220243688856999022477862011522467788754--158962567777762 Q ss_pred CHHHHHHHHHHHH-------HCCCC----CCCCCCHHHHH-------------H----HCC------------CHHHHHH Q ss_conf 2238999999987-------40888----64369888998-------------8----368------------9579999 Q gi|254780280|r 208 GKGLVNIYKALCI-------ADGFE----SNKVLSSKDIV-------------S----KSE------------DPIALKA 247 (348) Q Consensus 208 G~gl~~~y~~l~~-------~~~~~----~~~~~~~~~~~-------------~----~~~------------D~~A~~~ 247 (348) T Consensus 308 GmYLGEivR~vLl~m~~~~~lf~~~~~~l~p~~~~T~~~S~i~~D~~~~l~~~~~~~~~l~~~~~~~~~r~~V~~vc~~v 387 (474) T KOG1369 308 GMYLGEIVRLVLLDLLEEGLLFGGQSTKLTPFIFETKYVSAIEEDDTGALQETEKILDLLGLETTTTEDRKLVREVCDVV 387 (474) T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH T ss_conf 01399999999999867666434652236843314505776714870678888999986187767478899999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHCCC----CCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHH-HCCEEEEECCCCHHHH Q ss_conf 9999999999999999974899----7389965677655677276489999883798378897-3887999578722775 Q gi|254780280|r 248 INLFCEYLGRVAGDLALIFMAR----GGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMR-QIPTYVITNPYIAIAG 322 (348) Q Consensus 248 ~~~~~~~lg~~i~~l~~~~~p~----~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~-~ipv~~~~~~~agl~G 322 (348) T Consensus 388 ~~RaA~L~aagIaail~k~~~~~~~~~~VgvdGsly~~------yP~f~~~m~~~--l~eLlg~~~~i~i~~s~dgSg~G 459 (474) T KOG1369 388 SRRAARLAAAGIAAILNKTGELSRKRVTVGVDGSLYKN------HPFFREYLKEA--LRELLGPSIHVKLVLSEDGSGRG 459 (474) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHC------CCHHHHHHHHH--HHHHHCCCCEEEEEECCCCCCCC T ss_conf 99999988769999999844234673499953356670------84689999999--99971887149999878976423 Q ss_pred HHHHHHCCC Q ss_conf 999873800 Q gi|254780280|r 323 MVSYIKMTD 331 (348) Q Consensus 323 Aa~~~r~~~ 331 (348) T Consensus 460 AAL~Aav~~ 468 (474) T KOG1369 460 AALIAAVAS 468 (474) T ss_pred HHHHHHHHH T ss_conf 999999876 |
|
>PRK03011 butyrate kinase; Provisional | Back alignment and domain information |
---|
Probab=98.62 E-value=3e-05 Score=50.53 Aligned_cols=299 Identities=11% Similarity=0.118 Sum_probs=134.1 Q ss_pred CCCCEEEEEECCCCEEEEEEECCCCEEEEEEE---ECCCCC----CCH---HHHHHHHHHHCCC--CCCCEEEEEEEE-- Q ss_conf 67737999857511899998779980889997---438873----588---9999999972234--565546999730-- Q gi|254780280|r 11 IAFPVLLADIGGTNVRFAILRSMESEPEFCCT---VQTSDY----ENL---EHAIQEVIYRKIS--IRLRSAFLAIAT-- 76 (348) Q Consensus 11 ~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~---~~t~~~----~~~---~~~i~~~l~~~~~--~~~~~igi~v~G-- 76 (348) T Consensus 1 ~mmkILviN~GSSS~K~alf~~~~~~~~~~i~h~~~~~~~~~~~~~q~~~~~~~i~~~L~~~~~~~~~i~av~-~rGG~~ 79 (356) T PRK03011 1 MMMRILVINPGSTSTKIAVFEDEKPVFEETLRHSEEELEKFKTIIDQYEFRKQAILEFLEEHGIDISELDAVV-GRGGLL 79 (356) T ss_pred CCCEEEEECCCHHHHHHEEEECCCHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEE-EECCCC T ss_conf 9864999867806562047708846343214445455334454000388999999999997599836762899-808977 Q ss_pred -EEECCCEEE----------ECCCCCCCCHH-----HHHHHHCCCCEEEECH-------HHHHHHHHCCC-------C-H Q ss_conf -441685564----------21356666988-----9999828985588212-------65432000015-------8-6 Q gi|254780280|r 77 -PIGDQKSFT----------LTNYHWVIDPE-----ELISRMQFEDVLLIND-------FEAQALAICSL-------S-C 125 (348) Q Consensus 77 -pv~~~~~~~----------~~~~~~~~~~~-----~l~~~~~~~~v~i~ND-------~~a~a~~~~~~-------~-~ 125 (348) T Consensus 80 ~~v~gG~~~v~~~vl~~l~~~~~~~hp~nL~~i~a~~~a~~~~-ipa~~~D~~~~~~m~~~A~~~glp~i~R~~gFHGlS 158 (356) T PRK03011 80 KPIPGGTYRVNEAMLEDLKNGVYGEHASNLGAIIAYEIAKELG-IPAFIVDPVVVDEMEPVARISGLPEIERKSIFHALN 158 (356) T ss_pred CCCCCCCEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC-CCEEEECCCHHHCCCHHHHHHCCCCCEEEECCHHHH T ss_conf 4147988785899999998456678844307799987410107-997973872253076778974789751671502787 Q ss_pred HHHHHHCCC-CCCCCCCCCCEEEECCCCEEEEEEEECCC--CCCEECCCCCCCCCCCC-C-CHHHHHHHHHHHHHCCCCC Q ss_conf 553530243-45576667527993176202245431058--86301135678666676-6-1023478999985318986 Q gi|254780280|r 126 SNYVSIGQF-VEDNRSLFSSRVIVGPGTGLGISSVIRAK--DSWIPISCEGGHMDIGP-S-TQRDYEIFPHLTERAEGRL 200 (348) Q Consensus 126 ~~~~~lg~~-~~~~~~~~~~~~~ig~GtG~g~~~~~~~~--~g~~~~agE~Gh~~~~~-~-~~~~~~~~~~l~~~~g~~~ 200 (348) T Consensus 159 ~~~va~~~a~~lg~~~~~~~~Iv~HLGnGaSi~Ai~~GksvDTsmG~p~eG---l~m~tRsGdidp~~v~~l~-~~~~-- 232 (356) T PRK03011 159 QKAVARRAAKELGKRYEELNLIVAHLGGGISVGAHRKGRVIDVNNALDGEG---PFSPERAGGLPVGDLVELC-FSGK-- 232 (356) T ss_pred HHHHHHHHHHHHCCCHHHCCEEEEEECCCCEEEEEECCEEEECCCCCCCCC---CCCCCCCCCCCHHHHHHHH-HHCC-- T ss_conf 999999999995998788789999957981423442881787079989888---8789878998969999999-9569-- Q ss_pred CHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEECHHH Q ss_conf 4877522223899999998740888643698889988368957999999999999999999999748-997389965677 Q gi|254780280|r 201 SAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFM-ARGGVYISGGIP 279 (348) Q Consensus 201 ~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~-p~~~IvlgGGi~ 279 (348) T Consensus 233 -----~s~~el~~~Lnk~SGL~g~sGs~D~R~l~~~~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~G~vDaiVFTGGIg 307 (356) T PRK03011 233 -----YTKEELKKKLVGKGGLVAYLGTNDAREVEKRIEAGDEKAKLVYEAMAYQIAKEIGAMAAVLKGKVDAIVLTGGLA 307 (356) T ss_pred -----CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHH T ss_conf -----999999999974655310279951999999988879889999999999999999999997399678899888510 Q ss_pred HHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECC--C-CHHHHHHHHHHCCCCCC Q ss_conf 6556772764899998837983788973887999578--7-22775999873800124 Q gi|254780280|r 280 YKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNP--Y-IAIAGMVSYIKMTDCFN 334 (348) Q Consensus 280 ~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~--~-agl~GAa~~~r~~~~~~ 334 (348) T Consensus 308 en-------~~l~~~i~~~---~~~la--pv~v~pg~~Em~ala~galrvl~g~e~~~ 353 (356) T PRK03011 308 YS-------KRLVDWIKER---VSWIA--PVVVYPGEDEMEALAEGALRVLRGEEEAK 353 (356) T ss_pred CC-------HHHHHHHHHH---HCCEE--EEEECCCHHHHHHHHHHHHHHHCCCCCCC T ss_conf 49-------9999999986---16020--07973884999999986999963986645 |
|
>PRK13317 pantothenate kinase; Provisional | Back alignment and domain information |
---|
Probab=98.46 E-value=7.7e-05 Score=47.99 Aligned_cols=257 Identities=16% Similarity=0.127 Sum_probs=112.7 Q ss_pred CCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCC Q ss_conf 67737999857511899998779980889997438873588999999997223456554699973044168556421356 Q gi|254780280|r 11 IAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYH 90 (348) Q Consensus 11 ~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~~ 90 (348) T Consensus 1 m~m~-iGID~G~T~tKiv~~~~~-~~l-~f~~~~s~~---i~~~~~~~~-~~--~~i~~i~--vTG----gg-------- 57 (273) T PRK13317 1 MEMK-IGIDAGGTLTKIVYLEEK-NQR-TFKTVLSTD---IKKVIDWLK-NQ--NDIEKIC--LTG----GK-------- 57 (273) T ss_pred CCCE-EEEEECCCEEEEEEECCC-CCE-EEEECCCCC---HHHHHHHHH-HC--CCCCEEE--EEC----CC-------- T ss_conf 9856-999987770789998899-979-887313477---899999976-24--4522899--977----71-------- Q ss_pred CCCCHHHHHHHHC-CCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEEC Q ss_conf 6669889999828-985588212654320000158655353024345576667527993176202245431058863011 Q gi|254780280|r 91 WVIDPEELISRMQ-FEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPI 169 (348) Q Consensus 91 ~~~~~~~l~~~~~-~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~ 169 (348) T Consensus 58 ----s~~l~~~~~~~~~i~k~~E~~A~~~G~~~l~~~-----------~~~~~~~~llvniGsGtsi~~v~~~-~~~rvg 121 (273) T PRK13317 58 ----AGQLAQLLNIGYKIVEFVEFEATLQGVRYLLKE-----------EGHDLNDYILTNIGTGTSIHYVDGK-QQRRVG 121 (273) T ss_pred ----HHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCC-----------CCCCCCCEEEEECCCCEEEEEECCC-EEEEEC T ss_conf ----787889972589974654598999999998400-----------3787454799971687179997587-268845 Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHC-CHH------HHHHHHHHHHHCCCCCCCCCC-HHHH-H---- Q ss_conf 35678666676610234789999853189864877522-223------899999998740888643698-8899-8---- Q gi|254780280|r 170 SCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLS-GKG------LVNIYKALCIADGFESNKVLS-SKDI-V---- 236 (348) Q Consensus 170 agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~S-G~g------l~~~y~~l~~~~~~~~~~~~~-~~~~-~---- 236 (348) T Consensus 122 Gt~iG--------GGt~~GL~~lL~~~~~~~el~~la~~G~~~~vDl~v~dIy~~----~~~~l~~~~~As~FgK~~~~~ 189 (273) T PRK13317 122 GTGIG--------GGTIQGLGKLLTNITDYEQLIDLAKHGSRNTIDLKVRDIYKG----PLPPIDGDLTASNFGKVLHHD 189 (273) T ss_pred CCCCC--------HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCC----CCCCCCCCCEEEECCCCCCCC T ss_conf 74654--------188999999830899999999998657840266787788537----788999872677023641135 Q ss_pred HHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEEC Q ss_conf 836-8957999999999999999999999748997389965677655677276489999883798378897388799957 Q gi|254780280|r 237 SKS-EDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITN 315 (348) Q Consensus 237 ~~~-~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~ 315 (348) T Consensus 190 ~~~~~eDiaasl~~mV~~~Ig~lA~l~A~~~~i~~-i~f~G~~l~~~------~~~~~~~~~~---~~~~~~~~~f~~~~ 259 (273) T PRK13317 190 SNFTSSDILAAVIGLVGEVITTLSIQAAEEKNTEN-IVYIGSTLCNN------ALLQEVIEDY---TVLRGCTPIFLENG 259 (273) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE-EEEECCCCCCC------HHHHHHHHHH---HHHCCCEEEEECCH T ss_conf 69998999999999999999999999998749876-99989866688------7899999999---98669648861637 Q ss_pred CCCHHHHHHHHHH Q ss_conf 8722775999873 Q gi|254780280|r 316 PYIAIAGMVSYIK 328 (348) Q Consensus 316 ~~agl~GAa~~~r 328 (348) T Consensus 260 ~y~gAlGA~L~a~ 272 (273) T PRK13317 260 GFSGAIGALLLAT 272 (273) T ss_pred HHHHHHHHHHHCC T ss_conf 6869999987126 |
|
>PRK13322 pantothenate kinase; Reviewed | Back alignment and domain information |
---|
Probab=98.15 E-value=0.00057 Score=42.65 Aligned_cols=239 Identities=13% Similarity=0.103 Sum_probs=110.7 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCCCCC Q ss_conf 79998575118999987799808899974388735889999999972234565546999730441685564213566669 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYHWVID 94 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~~~~~~ 94 (348) T Consensus 2 ~LlIDiGNT~ik~~l~~~~-~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~v~~ssV~~~~~~~-----------~ 67 (252) T PRK13322 2 ILELDCGNSRLKWRVTDNA-GQIIEHGGLVHSD-QALVLLLG-LLQAFPVQACRLVSVSSVLDAETNQ-----------L 67 (252) T ss_pred EEEEEECCCCEEEEEEECC-CEEEEECCCCCHH-HHHHHHHH-HHHCCCCCCCCEEEEEECCHHHHHH-----------H T ss_conf 8999986361299999899-6299951514720-79999998-8744776679899999387789999-----------9 Q ss_pred HHHHHHHHCCCCEEEECHHHH----HHHHHC-CCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEEC Q ss_conf 889999828985588212654----320000-158655353024345576667527993176202245431058863011 Q gi|254780280|r 95 PEELISRMQFEDVLLINDFEA----QALAIC-SLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPI 169 (348) Q Consensus 95 ~~~l~~~~~~~~v~i~ND~~a----~a~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~ 169 (348) T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~gv~~~Y~~p~~LG~DR~~~~vaA~~~~---~~~~iVVD~GTA~TiD~v~~~--g~~-- 140 (252) T PRK13322 68 IAALARALGIPVVFAHVTAELAGVRNGYDDYEQLGIDRWLALLGAFHLA---KNACLVIDLGTAVTIDLVDAD--GQH-- 140 (252) T ss_pred HHHHHHHHCCCEEEEECCCCCCCCEECCCCHHHCCHHHHHHHHHHHHHC---CCCEEEEECCCCEEEEEECCC--CEE-- T ss_conf 9999997299859995676567854547982216778999999999866---998799985874267787148--708-- Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCC------CCCHHHHHHHCCCHH Q ss_conf 35678666676610234789999853189864877522223899999998740888643------698889988368957 Q gi|254780280|r 170 SCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNK------VLSSKDIVSKSEDPI 243 (348) Q Consensus 170 agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~------~~~~~~~~~~~~D~~ 243 (348) T Consensus 141 --~GG~I~-------------------------------PG~~l~~~aL~~~Ta~Lp~~~~~~~~~~~~~~~G~nT~~ai 187 (252) T PRK13322 141 --LGGYIC-------------------------------PGLYLMRDALRTHTRRIRYDDAEAERALDSLSPGRNTVDAV 187 (252) T ss_pred --EEEEEC-------------------------------CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH T ss_conf --888977-------------------------------75999999999877659965432344577766665789999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHHH Q ss_conf 99999999999999999999974899738996567765567727648999988379837889738879995787227759 Q gi|254780280|r 244 ALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAGM 323 (348) Q Consensus 244 A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~GA 323 (348) T Consensus 188 ~sG~~~g~~g~I~~~i~~~~~~~~~~~~vilTGG~a~~i~~~l~----------------------~~~~~~p~Lvl~GL 245 (252) T PRK13322 188 ERGCLLMLRGAIRTQAEQARQLLGPDFEIFLTGGDAPLLADFLP----------------------VGARIVPDLVFVGL 245 (252) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCC----------------------CCCEECCCCHHHHH T ss_conf 99999999999999999999987899889998988899975279----------------------98799988579999 Q ss_pred HHHHHC Q ss_conf 998738 Q gi|254780280|r 324 VSYIKM 329 (348) Q Consensus 324 a~~~r~ 329 (348) T Consensus 246 ~~~~~l 251 (252) T PRK13322 246 AQYCPL 251 (252) T ss_pred HHHHCC T ss_conf 998573 |
|
>TIGR02707 butyr_kinase butyrate kinase; InterPro: IPR011245 This group represents bacterial butyrate kinase, an enzyme that facilitates the formation of butyryl-CoA by phosphorylating butyrate in the presence of ATP to form butyryl phosphate | Back alignment and domain information |
---|
Probab=98.00 E-value=9.5e-05 Score=47.43 Aligned_cols=280 Identities=18% Similarity=0.274 Sum_probs=139.8 Q ss_pred CEEEEEECCCCEEEEEEECCCCEEEEEEEECCC-----CC----CCHH---HHHHHHHHHCCCCCCC--EEEEEEEE--- Q ss_conf 379998575118999987799808899974388-----73----5889---9999999722345655--46999730--- Q gi|254780280|r 14 PVLLADIGGTNVRFAILRSMESEPEFCCTVQTS-----DY----ENLE---HAIQEVIYRKISIRLR--SAFLAIAT--- 76 (348) Q Consensus 14 ~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~-----~~----~~~~---~~i~~~l~~~~~~~~~--~igi~v~G--- 76 (348) T Consensus 1 ~iLvINPGSTSTK~avf~de--~~~~~~tlrH~~eEL~~f~~v~dQfeFR~~~i~~~L~e~-Gi~~~~l~AvVgRGGLLk 77 (353) T TIGR02707 1 KILVINPGSTSTKLAVFEDE--KPLFEETLRHSVEELAKFKNVIDQFEFRKQVILEVLEEK-GINISKLDAVVGRGGLLK 77 (353) T ss_pred CCEEECCCCCCEEEEEEECC--EEEEEECCCCCHHHHHCCCCEEECHHHHHHHHHHHHHHC-CCCHHHEEEEEECCCCCC T ss_conf 92276798600003356578--067864462587873056640211268999999998740-887124315797277023 Q ss_pred EEECCCE----------------EEECCCCCCCCHHHHHHHHC-CC-----CEEEECHHH--HHHHHHCCCCH-HHHHHH Q ss_conf 4416855----------------64213566669889999828-98-----558821265--43200001586-553530 Q gi|254780280|r 77 PIGDQKS----------------FTLTNYHWVIDPEELISRMQ-FE-----DVLLINDFE--AQALAICSLSC-SNYVSI 131 (348) Q Consensus 77 pv~~~~~----------------~~~~~~~~~~~~~~l~~~~~-~~-----~v~i~ND~~--a~a~~~~~~~~-~~~~~l 131 (348) T Consensus 78 Pi~GGTY~Vn~~MleDLk~~~~GeHASNLG-aIIA~~lA~~~~diPafIVDPVVVD-EledvARISG~P~i~RkSIfHAL 155 (353) T TIGR02707 78 PIEGGTYLVNEKMLEDLKEGKRGEHASNLG-AIIARELADELNDIPAFIVDPVVVD-ELEDVARISGLPEIERKSIFHAL 155 (353) T ss_pred CCCCCEEEECHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHHCCCCCEEEECCCEEC-CCCCHHHHCCCCCCCCEEHHHHH T ss_conf 338960477655688885105887843368-9999998765189435882683350-55101321388986411044443 Q ss_pred CCC--------CCCCCCCCCCEEEECCCCEEEEEEEECCC--CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC Q ss_conf 243--------45576667527993176202245431058--86301135678666676610234789999853189864 Q gi|254780280|r 132 GQF--------VEDNRSLFSSRVIVGPGTGLGISSVIRAK--DSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLS 201 (348) Q Consensus 132 g~~--------~~~~~~~~~~~~~ig~GtG~g~~~~~~~~--~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~ 201 (348) T Consensus 156 NqKAvARr~A~e~gK~YE~~N~ivaHlGGGISvaAH~~Gr~vDVNNALdGeG---PFSPERsG~LP~~dlv--------- 223 (353) T TIGR02707 156 NQKAVARRIAKELGKRYEEMNLIVAHLGGGISVAAHRKGRVVDVNNALDGEG---PFSPERSGTLPLGDLV--------- 223 (353) T ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCCC---CCCCCCCCCCCHHHHH--------- T ss_conf 3889999999972896004454899828870341454861799734778432---9387545656588899--------- Q ss_pred HHHHHCCHH-HHHHHHHHHHHCCCCC--CC-CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCEEEEC Q ss_conf 877522223-8999999987408886--43-69888998836895799999999999999999999974899-7389965 Q gi|254780280|r 202 AENLLSGKG-LVNIYKALCIADGFES--NK-VLSSKDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMAR-GGVYISG 276 (348) Q Consensus 202 ~E~~~SG~g-l~~~y~~l~~~~~~~~--~~-~~~~~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~-~~IvlgG 276 (348) T Consensus 224 -~lCySGkyT~~E~kKkI~G~GGl~ayLGTnD~reV~~~I~~GD~kA~~ildAMaYQiAKeIG~mavVL~G~VDAI~LTG 302 (353) T TIGR02707 224 -DLCYSGKYTKEEMKKKIVGKGGLVAYLGTNDAREVEKKIEAGDEKAKLILDAMAYQIAKEIGKMAVVLKGKVDAIILTG 302 (353) T ss_pred -HHHHCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECC T ss_conf -9872761038899998526745332545588889999997310889999986545875677425040037266898546 Q ss_pred HHHHHHHHHHCCHH-HHHHHHHCCCHHHHHHHCCEEEEECCCCHHH Q ss_conf 67765567727648-9999883798378897388799957872277 Q gi|254780280|r 277 GIPYKIIDLLRNSS-FRESFENKSPHKELMRQIPTYVITNPYIAIA 321 (348) Q Consensus 277 Gi~~~~~~~l~~~~-f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~ 321 (348) T Consensus 303 GlAys-------~~f~v~~I~~~---v~fIAPv~vYPGEdEm~AL~ 338 (353) T TIGR02707 303 GLAYS-------KYFFVSEIRKR---VSFIAPVLVYPGEDEMEALA 338 (353) T ss_pred CHHCC-------CCHHHHHHHHC---CCEECCEEEECCCCHHHHHH T ss_conf 01306-------20455877613---32103668825981899985 |
The final steps in butyrate synthesis by anaerobic bacteria can occur via butyrate kinase and phosphotransbutyrylase or via butyryl-CoA:acetate CoA-transferase, the latter providing the dominant route for butyrate formation in human colonic bacteria .; GO: 0005524 ATP binding, 0047761 butyrate kinase activity, 0016310 phosphorylation, 0005737 cytoplasm. |
>pfam03630 Fumble Fumble | Back alignment and domain information |
---|
Probab=97.84 E-value=0.0021 Score=39.09 Aligned_cols=275 Identities=15% Similarity=0.166 Sum_probs=119.6 Q ss_pred EEEEEECCCCEEEEEEECCCCE---------------------EEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEE Q ss_conf 7999857511899998779980---------------------8899974388735889999999972234565546999 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESE---------------------PEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLA 73 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~---------------------i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~ 73 (348) T Consensus 2 h~~iDIGGTL~KlvYf~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~F~kF~t~~---i~~~l~-fi~~~~~-~~~~~~i- 75 (329) T pfam03630 2 HVAIDIGGTLIKLVYFSPVDISPDEESSEGHSLKNILLQERRGRLHFIKFETTD---IDLFLE-FLKEKLL-NKLTTVL- 75 (329) T ss_pred CEEEEECCCEEEEEEEECCCCCCCCHHCCHHHHHHHHCCCCCCEEEEEECCCCC---HHHHHH-HHHHCCC-CCCCCEE- T ss_conf 289961672799999855788864100000122222102678669999854016---999999-9985387-7676389- Q ss_pred EEEEEECCCEEEECCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHH---HHHHH--------CCCCCCCCCCC Q ss_conf 73044168556421356666988999982898558821265432000015865---53530--------24345576667 Q gi|254780280|r 74 IATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCS---NYVSI--------GQFVEDNRSLF 142 (348) Q Consensus 74 v~Gpv~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~---~~~~l--------g~~~~~~~~~~ 142 (348) T Consensus 76 -----------~aTGGGA~Kf~~~~~~~l~-i~v~k~DEm~~li~G~~fll~~~~~E~f~~~~~~~~~~~~~~~~~~~~~ 143 (329) T pfam03630 76 -----------CATGGGAYKFEELFRENLN-VKLQKEDEMDCLIQGLNFLLKNIPAECFTYSNDTDGEKTEFQQINNDDL 143 (329) T ss_pred -----------EEECCHHHHHHHHHHHHHC-CCEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC T ss_conf -----------9978608999999998709-9636602788899899999834975268970688842112356777777 Q ss_pred CCEEEECCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHH--------HHHH Q ss_conf 52799317620224543105886301135678666676610234789999853189864877522223--------8999 Q gi|254780280|r 143 SSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKG--------LVNI 214 (348) Q Consensus 143 ~~~~~ig~GtG~g~~~~~~~~~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~g--------l~~~ 214 (348) T Consensus 144 yPyllVNIGSGvSi~kV~~~~~~~RVgGtsiG--------GGT~~GL~~LLtg~~~fdEll~lA-~~Gd~~~vDllVgDI 214 (329) T pfam03630 144 YPYLLVNIGSGVSILKVDGPDQFERVGGSSLG--------GGTFLGLGSLLTGCTSFDELLDMA-QKGDNSNVDMLVRDI 214 (329) T ss_pred CCEEEEEECCCEEEEEEECCCCEEEECCCCCC--------CHHHHHHHHHHCCCCCHHHHHHHH-HCCCCCCHHHHHHHH T ss_conf 74399981687699999269844883475766--------511999999960999999999998-668950011312444 Q ss_pred HHHHHHHCCCCCCCCCCHH----HHHHH----CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHH Q ss_conf 9999874088864369888----99883----689579999999999999999999997489973899656776556772 Q gi|254780280|r 215 YKALCIADGFESNKVLSSK----DIVSK----SEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLL 286 (348) Q Consensus 215 y~~l~~~~~~~~~~~~~~~----~~~~~----~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l 286 (348) T Consensus 215 Yg~~y~~~gL~~~~~ASsFGK~~~~~~~~~~~~~eDia~SLl~mI~~nIg~ia~l~A~~~~i~~-I~F~G~fi~~~~-~t 292 (329) T pfam03630 215 YGGDYSKFGLKGDLIASSFGKVFRELKRLEDFSPEDIARSLLRMISNNIGQIAYLCALRFNLKR-IYFGGSFIRNNP-IT 292 (329) T ss_pred HCCCCCCCCCCCCEEEECCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE-EEEECCCCCCCH-HH T ss_conf 1885556799987643125450000334100787899999999999999999999999839988-999653115888-89 Q ss_pred CCH-HHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHHHH Q ss_conf 764-89999883798378897388799957872277599 Q gi|254780280|r 287 RNS-SFRESFENKSPHKELMRQIPTYVITNPYIAIAGMV 324 (348) Q Consensus 287 ~~~-~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~GAa 324 (348) T Consensus 293 m~~ls~ai~~ws~g~~------ka~FL~HeGylGAlGA~ 325 (329) T pfam03630 293 MKTLSYAINYWSKGEL------KAYFLRHEGYLGALGAF 325 (329) T ss_pred HHHHHHHHHHHHCCCE------EEEEEECCCCCHHHHHH T ss_conf 9999999999736870------38999538622788786 |
Fumble is required for cell division in Drosophila. Mutants lacking fumble exhibit abnormalities in bipolar spindle organisation, chromosome segregation, and contractile ring formation. Analyses have demonstrated that encodes three protein isoforms, all of which contain a domain with high similarity to the pantothenate kinases of A. nidulans and mouse. A role of fumble in membrane synthesis has been proposed. |
>PRK13334 consensus | Back alignment and domain information |
---|
Probab=97.70 E-value=0.0035 Score=37.77 Aligned_cols=246 Identities=14% Similarity=0.126 Sum_probs=106.4 Q ss_pred CCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCC---HHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECC Q ss_conf 773799985751189999877998088999743887358---89999999972234565546999730441685564213 Q gi|254780280|r 12 AFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYEN---LEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTN 88 (348) Q Consensus 12 ~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~---~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~ 88 (348) T Consensus 3 ~~~lL~IDIGNT~i~~glf~~-~~~l~~~~r~~t~~~~~~d~~~~~~~~~~~~~~~~~~~~~iisSVVP~~--------- 72 (262) T PRK13334 3 AFPLLAVDIGNTSTVLGLADG-SELLTHTWRIRTNRMRLPDDLALQLHGLFTLAGAPPPRAAVLSSVAPPV--------- 72 (262) T ss_pred CCEEEEEEECCCCEEEEEEEC-CEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH--------- T ss_conf 870899997788059999978-9179999995167100777999999999976399868879999637157--------- Q ss_pred CCCCCCHHHHHHHHCCCCEEEECHHHHHHH----H-HCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCC Q ss_conf 566669889999828985588212654320----0-00158655353024345576667527993176202245431058 Q gi|254780280|r 89 YHWVIDPEELISRMQFEDVLLINDFEAQAL----A-ICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAK 163 (348) Q Consensus 89 ~~~~~~~~~l~~~~~~~~v~i~ND~~a~a~----~-~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~ 163 (348) T Consensus 73 --~~~~~~~l~~~~~~~~-~~v~~~~~~~i~i~~~~P~~lG~DRianavaA~~-~~~~~~~~iVID~GTAtT~dvv~~~g 148 (262) T PRK13334 73 --GRNYARALERHFGVDA-FVVEAENLPDVTVELDNPGSAGADRLCNLFGAEA-YLSPTGYAVVVDFGTSTNFDVVERGR 148 (262) T ss_pred --HHHHHHHHHHHHCCCE-EEECCCCCCCCEEECCCHHHCCHHHHHHHHHHHH-HCCCCCCEEEEECCCEEEEEEECCCC T ss_conf --9999999999869986-9988987679626347956535899999999998-35888988999868707999995899 Q ss_pred CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC--HHHHHHHCCC Q ss_conf 86301135678666676610234789999853189864877522223899999998740888643698--8899883689 Q gi|254780280|r 164 DSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLS--SKDIVSKSED 241 (348) Q Consensus 164 ~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~--~~~~~~~~~D 241 (348) T Consensus 149 ~------y~GG~I-------------------------------~PGi~~s~~aL~~~Ta~LP~v~~~~p~~~iG~nT~~ 191 (262) T PRK13334 149 R------FLGGIL-------------------------------ATGAQVSADALFARAAKLPRITLTAPKAAIGKNTVH 191 (262) T ss_pred E------EEEEEE-------------------------------CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH T ss_conf 0------899998-------------------------------556799999999976338744555788888998799 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHH Q ss_conf 57999999999999999999999748997389965677655677276489999883798378897388799957872277 Q gi|254780280|r 242 PIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIA 321 (348) Q Consensus 242 ~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~ 321 (348) T Consensus 192 ai~SG~~~G~~~~Ieg~i~~~~~e~~~~~~vI~TGG~a~~i~~~~~----------------------~~~~~d~~LtL~ 249 (262) T PRK13334 192 ALQSGLVFGYAEMVDGLLRRFRAELPGEAVAIATGGFARTLRGICP----------------------EIDVYDETLTLR 249 (262) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCC----------------------CCCEECCCCHHH T ss_conf 9999999999999999999999985999889997996799874189----------------------974899684799 Q ss_pred HHHHHHHCC Q ss_conf 599987380 Q gi|254780280|r 322 GMVSYIKMT 330 (348) Q Consensus 322 GAa~~~r~~ 330 (348) T Consensus 250 GL~~i~~~~ 258 (262) T PRK13334 250 GLVELWASR 258 (262) T ss_pred HHHHHHHHC T ss_conf 999999971 |
|
>PRK13311 N-acetyl-D-glucosamine kinase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=7.6e-42 Score=276.57 Aligned_cols=242 Identities=19% Similarity=0.192 Sum_probs=180.7 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCC--CCCCHHHHHHHHHHHCCC--CCCCEEEEEEEEEEECCCE-EEECCC Q ss_conf 79998575118999987799808899974388--735889999999972234--5655469997304416855-642135 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTS--DYENLEHAIQEVIYRKIS--IRLRSAFLAIATPIGDQKS-FTLTNY 89 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~--~~~~~~~~i~~~l~~~~~--~~~~~igi~v~Gpv~~~~~-~~~~~~ 89 (348) T Consensus 2 ylGiDIGGTki~~~l~d~~-g~~~~~~~~~T~~~~~~~~~~~i~~l~~~~~~~~~~~~~IGig~pG~vd~~~g~v~~~n~ 80 (256) T PRK13311 2 YYGFDMGGTKIELGVFDEN-LQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSVGIGIPGLPNADDGTVFTANV 80 (256) T ss_pred EEEEECCCHHEEEEEEECC-CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCC T ss_conf 9999934101102899699-989999997499857999999999999998874698875999807776799999995567 Q ss_pred -CCC-CC-HHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCC--C Q ss_conf -666-69-889999828985588212654320000158655353024345576667527993176202245431058--8 Q gi|254780280|r 90 -HWV-ID-PEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAK--D 164 (348) Q Consensus 90 -~~~-~~-~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~--~ 164 (348) T Consensus 81 ~~~~~~~l~~~L~~~~~-~pV~v~NDan~aal~E~~~G-------------a~~~~~~~v~ltlGTGiGggiii~G~l~~ 146 (256) T PRK13311 81 PSAMGQPLQADLSRLIQ-REVRIDNDANCFALSEAWDP-------------EFRTYPTVLGLILGTGVGGGLIVNGSIVS 146 (256) T ss_pred CCCCCCCHHHHHHHHHC-CCEEECCHHHHHHHHHHHCC-------------CCCCCCEEEEEEECCCCEEEEEECCEECC T ss_conf 62028925999999869-97897754789999998607-------------34799828999933675468999999825 Q ss_pred CCEECCCCCCCCCCCCCCHHHH-HHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHCCC Q ss_conf 6301135678666676610234-7899998531898648775222238999999987408886436988899--883689 Q gi|254780280|r 165 SWIPISCEGGHMDIGPSTQRDY-EIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDI--VSKSED 241 (348) Q Consensus 165 g~~~~agE~Gh~~~~~~~~~~~-~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~--~~~~~D 241 (348) T Consensus 147 G~~g~AGEiGH~~i~~~~~~~~g~~~~~~~C~CG~~GclE~~~Sg~~l~~~~~~~~~-------~~~~~~ei~~~~~~GD 219 (256) T PRK13311 147 GRNHITGEFGHFRLPVDALDILGADIPRVPCGCGHRGCIENYISGRGFEWMYSHFYQ-------HTLPATDIIAHYAAGE 219 (256) T ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHC-------CCCCHHHHHHHHHCCC T ss_conf 999882587367847775221134477665668987612433466989999998738-------9999999999998789 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHH Q ss_conf 57999999999999999999999748997389965677 Q gi|254780280|r 242 PIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIP 279 (348) Q Consensus 242 ~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~ 279 (348) T Consensus 220 ~~A~~~ie~~~~~La~~lanlvniL~p~-~~~~g~gv~ 256 (256) T PRK13311 220 PKAVAHVERFMDVLAVCLGNLLTMLGSP-FGRGGWGVV 256 (256) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCC-EEEECCCCC T ss_conf 8999999999999999999999971875-287557559 |
|
>PTZ00288 glucokinase 1; Provisional | Back alignment and domain information |
---|
Probab=99.92 E-value=1.4e-23 Score=163.75 Aligned_cols=282 Identities=19% Similarity=0.213 Sum_probs=186.0 Q ss_pred CCCEEEEEECCCCEEEEEEECCCC----EEEEEEEE--CCCCCCCHHHHHHHHHHHC----C------CCCCCEEEEEEE Q ss_conf 773799985751189999877998----08899974--3887358899999999722----3------456554699973 Q gi|254780280|r 12 AFPVLLADIGGTNVRFAILRSMES----EPEFCCTV--QTSDYENLEHAIQEVIYRK----I------SIRLRSAFLAIA 75 (348) Q Consensus 12 ~~~vL~iDIGGT~ir~glv~~~~~----~i~~~~~~--~t~~~~~~~~~i~~~l~~~----~------~~~~~~igi~v~ 75 (348) T Consensus 26 P~~~v-cDVGGtsaR~gF~r~~~nd~~~~h~~~~r~~~t~~dir~L~effnE~~~~~kk~~p~~~as~~~rv~~~ai~V~ 104 (411) T PTZ00288 26 PIYVV-CDVGGTSARVGFARAAQHDRSGLHIIYVRFRVTKRDIRQLLEFFDEVLQHLKKNLPYRAASFLRRVASGAVSVP 104 (411) T ss_pred CEEEE-EECCCCEEEEHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEECC T ss_conf 86999-81588411331124235985544689986211188999999999999999874278751677765304245335 Q ss_pred EEEECCCEE-EECCCCCCCCHHHHHHHH-CCCCEEEECHHHHHHHHHCCCC-----HHHHHHHCCCC----------CCC Q ss_conf 044168556-421356666988999982-8985588212654320000158-----65535302434----------557 Q gi|254780280|r 76 TPIGDQKSF-TLTNYHWVIDPEELISRM-QFEDVLLINDFEAQALAICSLS-----CSNYVSIGQFV----------EDN 138 (348) Q Consensus 76 Gpv~~~~~~-~~~~~~~~~~~~~l~~~~-~~~~v~i~ND~~a~a~~~~~~~-----~~~~~~lg~~~----------~~~ 138 (348) T Consensus 105 GPv~~~~v~gpf~N~kG~A~l~d~P~~LFPkgrsa~LNDLEAGaYGViA~~eqg~ls~~F~~mw~gTqw~~~~e~~P~G~ 184 (411) T PTZ00288 105 GPVTNGQLAGPFNNLKGIARLADYPVELFPKGRSALLNDLEAGSYGVLALSNAGMLSDYFKVMWKGTQWDALSEGKPAGS 184 (411) T ss_pred CCCCCCEEECCCCCCCCHHHHHHCCHHHCCCCCHHHHCCHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCC T ss_conf 66649824033558866066765847338997411001100353026873004665689999851323332113589886 Q ss_pred CCCCCCEEEECCCCEEEEEEEECCC--CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHH-----------CCCCCCHHHH Q ss_conf 6667527993176202245431058--86301135678666676610234789999853-----------1898648775 Q gi|254780280|r 139 RSLFSSRVIVGPGTGLGISSVIRAK--DSWIPISCEGGHMDIGPSTQRDYEIFPHLTER-----------AEGRLSAENL 205 (348) Q Consensus 139 ~~~~~~~~~ig~GtG~g~~~~~~~~--~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~-----------~g~~~~~E~~ 205 (348) T Consensus 185 vi~~gR~aVLA~GSGLG~aLI~~~p~~dqp~VlptElGhlqIp~c~~e~~kylQ~L~~~~~~~~~~~~le~~~~P~yE~i 264 (411) T PTZ00288 185 TIGRGRCMVVAPGTGVGSSLIHYVGVSDSYIVLALECGSLSMSWCANEDSKYVQALAGYMASKARAKGLDSTVAPIWEAA 264 (411) T ss_pred EECCCCEEEEECCCCCCEEEEEECCCCCCCEEEEHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH T ss_conf 00588459995178764578885366778567133108510537888879999999998765543025443336217777 Q ss_pred HCCHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHH Q ss_conf 22223899999998740888-643698889988368-9579999999999999999999997489973899656776556 Q gi|254780280|r 206 LSGKGLVNIYKALCIADGFE-SNKVLSSKDIVSKSE-DPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKII 283 (348) Q Consensus 206 ~SG~gl~~~y~~l~~~~~~~-~~~~~~~~~~~~~~~-D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~ 283 (348) T Consensus 265 vSG~Gle~~Y~yek~~~~~s~P~~sa~EiAklA~ag~d~~avkaMk~~y~yLmr~~~E~sm~~lplt~vL~GDNIV-~N~ 343 (411) T PTZ00288 265 VSGAGLEFNYAYEKEGPKASAPLKSAPEVAKLAKAGSDPAAVAAMDRLYKNLMGLTAETTMQFLPLTCVLMGDNIV-SNS 343 (411) T ss_pred HCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC-CCC T ss_conf 4474155668887515456789877378998876299768999999999999866566434422637999744101-353 Q ss_pred HHHCCHHHHHHH Q ss_conf 772764899998 Q gi|254780280|r 284 DLLRNSSFRESF 295 (348) Q Consensus 284 ~~l~~~~f~~~f 295 (348) T Consensus 344 f~~~np~n~k~~ 355 (411) T PTZ00288 344 FYFDNPENVKRL 355 (411) T ss_pred EECCCHHHHHHH T ss_conf 011687889999 |
|
>COG1521 Pantothenate kinase type III (Bvg accessory factor family protein) [Transcription] | Back alignment and domain information |
---|
Probab=97.65 E-value=0.0041 Score=37.31 Aligned_cols=221 Identities=16% Similarity=0.181 Sum_probs=101.5 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCC---CHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCC Q ss_conf 79998575118999987799808899974388735---889999999972234565546999730441685564213566 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYE---NLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYHW 91 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~---~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~~~ 91 (348) T Consensus 2 ~L~iDiGNT~~~~a~~~--~~~~~~~~r~~t~~~~~~del~~~~~~l~~~~~~~~~~~~~issvvp~~~~---------- 69 (251) T COG1521 2 LLLIDIGNTRIVFALYE--GGKVVQTWRLATEDLLTEDELGLQLHNLFDGNSVRDIDGIVISSVVPPLGI---------- 69 (251) T ss_pred EEEEEECCCEEEEEEEC--CCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHH---------- T ss_conf 58998179707899803--985788776044511027788889887750253113456143134762889---------- Q ss_pred CCCHHHHHHHHCCCCEEEECHHHHHHHHHC-----CCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCC Q ss_conf 669889999828985588212654320000-----158655353024345576667527993176202245431058863 Q gi|254780280|r 92 VIDPEELISRMQFEDVLLINDFEAQALAIC-----SLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSW 166 (348) Q Consensus 92 ~~~~~~l~~~~~~~~v~i~ND~~a~a~~~~-----~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~ 166 (348) T Consensus 70 -~~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~~p~elG~DR~~n~vaA~~--~~-~~~~vVVD~GTA~Tid~v~~~~~-- 143 (251) T COG1521 70 -FLEAVLKEYFKVKPLVVISPKQLLGIRVLYDNPEELGADRIANAVAAYH--KY-GKAVVVVDFGTATTIDLVDEGGR-- 143 (251) T ss_pred -HHHHHHHHHHCCCCCEEECHHHCCCCCCCCCCHHHHCHHHHHHHHHHHH--HC-CCCEEEEECCCEEEEEEECCCCC-- T ss_conf -9999999982438504316655368654578844406899999999998--72-99479997587079999928986-- Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHH Q ss_conf 01135678666676610234789999853189864877522223899999998740888643698889988368957999 Q gi|254780280|r 167 IPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSEDPIALK 246 (348) Q Consensus 167 ~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~~~~~~D~~A~~ 246 (348) T Consensus 144 ----~lGG~I~--PGi~----------------l~~~aL~------~~aa~lp~~~~~~~~~~~g-----k~T~~aiqsG 190 (251) T COG1521 144 ----YLGGAIL--PGIT----------------LSFEALF------ARAAKLPRVEIARPESVPG-----KNTVEAIQSG 190 (251) T ss_pred ----EEEEEEC--CCHH----------------HHHHHHH------HHHHCCCCCCCCCCCCCCC-----CCHHHHHHHH T ss_conf ----7556866--6789----------------9999999------8885488654447444589-----6659999871 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHH Q ss_conf 9999999999999999997489973899656776556772 Q gi|254780280|r 247 AINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLL 286 (348) Q Consensus 247 ~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l 286 (348) T Consensus 191 ~v~g~~~~i~~~~~~~k~~~~~~~~~vltGg~~~~~~~~~ 230 (251) T COG1521 191 VVYGYVGLIEGLLKEIKEELKGGDAVVLTGGLAKLLLDEL 230 (251) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHC T ss_conf 8999999999999999997289970998588267645540 |
|
>pfam00480 ROK ROK family | Back alignment and domain information |
---|
Probab=99.96 E-value=4.6e-29 Score=197.64 Aligned_cols=171 Identities=23% Similarity=0.219 Sum_probs=128.7 Q ss_pred EEEECCCCEEEEEEECCCCEEEEEEEECCCC--CCCHHHHHHHHHHHCC--CCCCCEEEEEEEEEEECCC--EEEECCCC Q ss_conf 9985751189999877998088999743887--3588999999997223--4565546999730441685--56421356 Q gi|254780280|r 17 LADIGGTNVRFAILRSMESEPEFCCTVQTSD--YENLEHAIQEVIYRKI--SIRLRSAFLAIATPIGDQK--SFTLTNYH 90 (348) Q Consensus 17 ~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~--~~~~~~~i~~~l~~~~--~~~~~~igi~v~Gpv~~~~--~~~~~~~~ 90 (348) T Consensus 1 GiDiGgt~i~~~l~d~-~G~i~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~giGi~~pG~vd~~~g~v~~~~~~~ 79 (181) T pfam00480 1 GIDLGGTKIELALFDE-DGEILDRERIPTPETTPEETLDALVDFVEEAITQYGASLGIGIGSPGIIDDDQGTITLTPNIG 79 (181) T ss_pred CEEECCCEEEEEEECC-CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCEEEECCCCC T ss_conf 9997885899999949-997999999989999999999999999999887519832699998534818948796148888 Q ss_pred CC-CCH-HHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCC--CCC Q ss_conf 66-698-89999828985588212654320000158655353024345576667527993176202245431058--863 Q gi|254780280|r 91 WV-IDP-EELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAK--DSW 166 (348) Q Consensus 91 ~~-~~~-~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~--~g~ 166 (348) T Consensus 80 w~~~~l~~~l~~~~~-~Pv~v~NDa~aaalaE~~~G-------------~~~~~~~~~~i~lgtGiG~giv~~G~l~~G~ 145 (181) T pfam00480 80 WADFDLVKKLESRFN-VPVYIENDANAAALGEKVFG-------------ASKDVSNVIYVTIGTGIGAGIIINGKLFRGA 145 (181) T ss_pred CCCCCHHHHHHHHHC-CCEEECCHHHHHHHHHHHHC-------------CCCCCCCEEEEEECCCEEEEEEECCEEEECC T ss_conf 447878999999869-98043222649999999829-------------8755673899996774389999999994589 Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHH Q ss_conf 011356786666766102347899998531898648775222238 Q gi|254780280|r 167 IPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGL 211 (348) Q Consensus 167 ~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl 211 (348) T Consensus 146 ~g~AGEiGH~~v~~~g~---------~C~CG~~GClE~~~S~~al 181 (181) T pfam00480 146 HGEAGEIGHPLDDPHGF---------VCGCGNHGCLETIASGRAL 181 (181) T ss_pred CCCCCEEEEEEECCCCC---------CCCCCCCCHHHHHHHHCCC T ss_conf 99663806448769997---------1799781047776415019 |
|
>PRK07157 acetate kinase; Provisional | Back alignment and domain information |
---|
Probab=98.22 E-value=0.0004 Score=43.57 Aligned_cols=50 Identities=12% Similarity=0.081 Sum_probs=42.8 Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEECHHHHH Q ss_conf 8899883689579999999999999999999997489-9738996567765 Q gi|254780280|r 232 SKDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMA-RGGVYISGGIPYK 281 (348) Q Consensus 232 ~~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p-~~~IvlgGGi~~~ 281 (348) T Consensus 282 ~l~~~~~~gd~~A~lA~d~f~yri~k~IGa~aa~LgG~lDalVFTgGIGEn 332 (398) T PRK07157 282 DVIKAAESGNLEASFALDLYAQKIVDYLANYANKIGGKIDAIVFTAGVGEN 332 (398) T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC T ss_conf 999988778998999999999999999999999838988889985833678 |
|
>PRK12397 propionate kinase; Reviewed | Back alignment and domain information |
---|
Probab=98.20 E-value=0.00043 Score=43.41 Aligned_cols=50 Identities=18% Similarity=0.271 Sum_probs=43.6 Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHH Q ss_conf 88998836895799999999999999999999974899738996567765 Q gi|254780280|r 232 SKDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYK 281 (348) Q Consensus 232 ~~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~ 281 (348) T Consensus 285 ~l~~~~~~g~~~A~lA~d~f~yri~k~IGa~~a~LgglDaiVFTgGIGEn 334 (404) T PRK12397 285 DVEQAANTGNRQAKLALTLFAERIRATIGSYIMQMGGLDALVFTGGIGEN 334 (404) T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC T ss_conf 99998877898899999999999999999999973899999987834668 |
|
>pfam00871 Acetate_kinase Acetokinase family | Back alignment and domain information |
---|
Probab=98.15 E-value=0.00028 Score=44.56 Aligned_cols=50 Identities=14% Similarity=0.232 Sum_probs=43.4 Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHH Q ss_conf 88998836895799999999999999999999974899738996567765 Q gi|254780280|r 232 SKDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYK 281 (348) Q Consensus 232 ~~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~ 281 (348) T Consensus 283 el~~~~~~gd~~A~lA~d~f~yri~k~IGa~~a~LggvDaiVFTGGIGEn 332 (387) T pfam00871 283 DVEDAMEEGDEEAELAYKVYVYRIAKYIGEYSAVLEGVDAIVFTGGIGEN 332 (387) T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC T ss_conf 99999988799899999999999999999999976899999988830348 |
This family includes acetate kinase, butyrate kinase and 2-methylpropanoate kinase. |
>PRK00180 acetate kinase; Reviewed | Back alignment and domain information |
---|
Probab=98.02 E-value=0.001 Score=41.12 Aligned_cols=49 Identities=18% Similarity=0.244 Sum_probs=42.8 Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHH Q ss_conf 8998836895799999999999999999999974899738996567765 Q gi|254780280|r 233 KDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYK 281 (348) Q Consensus 233 ~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~ 281 (348) T Consensus 286 l~~~~~~gd~~A~lA~d~f~yri~k~IGa~aa~LGglDaiVFTGGIGEn 334 (399) T PRK00180 286 IEAAAEEGDERAKLALDVFVYRLAKYIGSYAAALGGLDAIVFTAGIGEN 334 (399) T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC T ss_conf 9999878799899999999999999999999862899999987844678 |
|
>PRK12379 propionate/acetate kinase; Provisional | Back alignment and domain information |
---|
Probab=97.92 E-value=0.0015 Score=39.99 Aligned_cols=49 Identities=20% Similarity=0.198 Sum_probs=42.8 Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHH Q ss_conf 8998836895799999999999999999999974899738996567765 Q gi|254780280|r 233 KDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYK 281 (348) Q Consensus 233 ~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~ 281 (348) T Consensus 286 l~~~~~~g~~~A~lA~d~f~yri~k~IGa~~a~LgglDaiVFTgGIGEn 334 (400) T PRK12379 286 LEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHRLDGIIFTGGIGEN 334 (400) T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC T ss_conf 9998877899899999999999999999999986899999987854668 |
|
>PRK12440 acetate kinase; Reviewed | Back alignment and domain information |
---|
Probab=95.45 E-value=0.17 Score=27.41 Aligned_cols=49 Identities=14% Similarity=0.117 Sum_probs=43.3 Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHH Q ss_conf 8998836895799999999999999999999974899738996567765 Q gi|254780280|r 233 KDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYK 281 (348) Q Consensus 233 ~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~ 281 (348) T Consensus 285 l~~~~~~g~~~A~lA~d~f~yri~k~IGay~a~LgglDalVFTgGIGEn 333 (397) T PRK12440 285 ILEAMEEGHEGATLAFQVFTYRVAKYIASYLAALDSLDGIIFTGGIGEN 333 (397) T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC T ss_conf 9999878898799999999999999999999873899999985854668 |
|
>PRK07058 acetate kinase; Provisional | Back alignment and domain information |
---|
Probab=93.90 E-value=0.4 Score=25.02 Aligned_cols=46 Identities=22% Similarity=0.269 Sum_probs=41.1 Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHH Q ss_conf 8836895799999999999999999999974899738996567765 Q gi|254780280|r 236 VSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYK 281 (348) Q Consensus 236 ~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~ 281 (348) T Consensus 286 l~~~~~~~A~lA~d~f~~ri~k~IGay~a~LgglDalVFTgGIGEn 331 (393) T PRK07058 286 LLASDAPEAREALDLFALRIAGEIARLAATLGGLDALVFTAGIGEH 331 (393) T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC T ss_conf 9876997689999999999999999999874899999987854668 |
|
>KOG2201 consensus | Back alignment and domain information |
---|
Probab=93.56 E-value=0.47 Score=24.65 Aligned_cols=63 Identities=22% Similarity=0.233 Sum_probs=42.9 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCH-HHHHHHHHCCCHHHH Q ss_conf 89579999999999999999999997489973899656776556772764-899998837983788 Q gi|254780280|r 240 EDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNS-SFRESFENKSPHKEL 304 (348) Q Consensus 240 ~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~-~f~~~f~~~~~~~~~ 304 (348) T Consensus 277 ~eDia~SlL~mIsnNIGqiAyl~A~~~ni~r-V~FgG~fiR~~-~itM~tLsyAi~fWSkG~~kAl 340 (371) T KOG2201 277 KEDIARSLLRMISNNIGQIAYLCALNENIKR-VYFGGFFIRGH-PITMKTLSYAINFWSKGELKAL 340 (371) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEEEEEEECC-CEEHHHHHHHHHHHCCCHHHHH T ss_conf 5789999999997218999999988727637-99942687447-1104789999987434128767 |
|
>PRK13329 pantothenate kinase; Reviewed | Back alignment and domain information |
---|
Probab=98.17 E-value=0.00044 Score=43.32 Aligned_cols=129 Identities=9% Similarity=0.057 Sum_probs=62.5 Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCCC Q ss_conf 73799985751189999877998088999743887358899999999722345655469997304416855642135666 Q gi|254780280|r 13 FPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYHWV 92 (348) Q Consensus 13 ~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~~~~ 92 (348) T Consensus 1 Mm~L~iDIGNT~ik~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~--~~~~~~~~i~~ssV~~~~~~~---------- 65 (246) T PRK13329 1 MTFLAIDVGNTRLKWGLYDAAGAAWLAHGAVFLA---EIDRLAEAEW--ADLPPPRRVLGCNVAGDAVKR---------- 65 (246) T ss_pred CCEEEEEECCCEEEEEEEECCCCEEEEEEEEECH---HHHHHHHHHH--CCCCCCCEEEEEECCCHHHHH---------- T ss_conf 9799999778805999998899779998546502---3998887764--026777769999758688899---------- Q ss_pred CCHHHHHHHHCCCCEEEECHHHH----HHHHHC-CCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEE Q ss_conf 69889999828985588212654----320000-158655353024345576667527993176202245431 Q gi|254780280|r 93 IDPEELISRMQFEDVLLINDFEA----QALAIC-SLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVI 160 (348) Q Consensus 93 ~~~~~l~~~~~~~~v~i~ND~~a----~a~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~ 160 (348) T Consensus 66 -~~~~~~~~~~~~~~~~~~~~~~~gl~~~Y~~p~~LG~DR~~~~vaA~~~---~~~~~iVID~GTA~T~D~V~ 134 (246) T PRK13329 66 -RVAEQLELWDVAPHWVVASARECGVTNGYDHPARLGADRWVALIGARHG---PRRPCLVVMVGTAVTVDALD 134 (246) T ss_pred -HHHHHHHHHCCCCEEEECCCCCCCCEECCCCHHHCCHHHHHHHHHHHHH---CCCCEEEEECCCCEEEEEEC T ss_conf -9999999838996799557646794464699476357899999999985---59988999558623677874 |
|
>PRK13332 consensus | Back alignment and domain information |
---|
Probab=97.88 E-value=0.00041 Score=43.52 Aligned_cols=127 Identities=11% Similarity=0.161 Sum_probs=63.2 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHH---HHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCC Q ss_conf 7999857511899998779980889997438873588999---9999972234565546999730441685564213566 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHA---IQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYHW 91 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~---i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~~~ 91 (348) T Consensus 2 ~L~IDIGNT~ik~~l~~~--~~~~~~~~~~t~~~~~~~~l~~~~~~~~~~-~~~~i~~v~isSVvp~~~~---------- 68 (251) T PRK13332 2 LLLFDVGNTHTVVGITED--GKTFLKWRISTGSFETEDELFVILKPLLGD-AMREIKGVGVSSVVPNVNT---------- 68 (251) T ss_pred EEEEEECCCCEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHH-HHHHCCEEEEEECCCCHHH---------- T ss_conf 899998887069999989--999999997488657879999999998503-2533888999978526599---------- Q ss_pred CCCHHHHHHHHCCCCEEEECHHHHHH----HHH-CCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEE Q ss_conf 66988999982898558821265432----000-015865535302434557666752799317620224543 Q gi|254780280|r 92 VIDPEELISRMQFEDVLLINDFEAQA----LAI-CSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSV 159 (348) Q Consensus 92 ~~~~~~l~~~~~~~~v~i~ND~~a~a----~~~-~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~ 159 (348) T Consensus 69 -~~~~~~~~~~~~~~~~v~~~~-~~~i~~~~~~p~~lG~DR~a~~vaa~~~~---~~~~iVID~GTA~TiDvv 136 (251) T PRK13332 69 -VFERFSKKYFNISPIFVKAKN-GNCIKWNVKNPSEVGADRVANVIAAVKEY---GKDAIILDFGTAITIDVL 136 (251) T ss_pred -HHHHHHHHHCCCCEEEECCCC-CCCCEEECCCHHHCCHHHHHHHHHHHHHC---CCCEEEEECCCEEEEEEE T ss_conf -999999982699749825877-78861605894763678999999999861---998899975982799985 |
|
>PRK13318 pantothenate kinase; Reviewed | Back alignment and domain information |
---|
Probab=97.81 E-value=0.0024 Score=38.81 Aligned_cols=130 Identities=12% Similarity=0.059 Sum_probs=67.0 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHH---HHHHHHHHHC--CCCCCCEEEEEEEEEEECCCEEEECCC Q ss_conf 79998575118999987799808899974388735889---9999999722--345655469997304416855642135 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLE---HAIQEVIYRK--ISIRLRSAFLAIATPIGDQKSFTLTNY 89 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~---~~i~~~l~~~--~~~~~~~igi~v~Gpv~~~~~~~~~~~ 89 (348) T Consensus 2 ~L~IDiGNT~ik~~l~~--~~~~~~~~~~~~~~~~~~de~~~~l~~l~~~~~~~~~~i~~v~isSVvp~~~~-------- 71 (258) T PRK13318 2 LLAIDVGNTNTVFGLFD--GGKLVAHWRISTDSRRTADEYGVWLKQLLGLAGLDFEDITGIIISSVVPSVMH-------- 71 (258) T ss_pred EEEEEECCCCEEEEEEE--CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHH-------- T ss_conf 89999888714999998--99999999953787668789999999999874996102643699515276799-------- Q ss_pred CCCCCHHHHHHHHCCCCEEEECHHHH----HHHHHC-CCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEE Q ss_conf 66669889999828985588212654----320000-158655353024345576667527993176202245431 Q gi|254780280|r 90 HWVIDPEELISRMQFEDVLLINDFEA----QALAIC-SLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVI 160 (348) Q Consensus 90 ~~~~~~~~l~~~~~~~~v~i~ND~~a----~a~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~ 160 (348) T Consensus 72 ---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~LG~DR~~~~vaA~~~~---~~~~iVID~GTA~TiD~v~ 141 (258) T PRK13318 72 ---SLERMCRKYFNIEPLVVVGPGVKTGINIKVDNPKEVGADRIVNAVAAYELY---GGPLIVVDFGTATTFDVVS 141 (258) T ss_pred ---HHHHHHHHHHCCCCEEEECCCCCCCCEECCCCHHHCCHHHHHHHHHHHHHC---CCCEEEEECCCCEEEEEEC T ss_conf ---999999998599819996777776951567994873768999999999866---9988999748813777984 |
|
>PRK13321 pantothenate kinase; Reviewed | Back alignment and domain information |
---|
Probab=97.66 E-value=0.002 Score=39.31 Aligned_cols=131 Identities=12% Similarity=0.084 Sum_probs=66.9 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHH---HHHHHHHHHCC--CCCCCEEEEEEEEEEECCCEEEECCC Q ss_conf 79998575118999987799808899974388735889---99999997223--45655469997304416855642135 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLE---HAIQEVIYRKI--SIRLRSAFLAIATPIGDQKSFTLTNY 89 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~---~~i~~~l~~~~--~~~~~~igi~v~Gpv~~~~~~~~~~~ 89 (348) T Consensus 2 ~L~IDiGNT~ik~g~~~~--~~~~~~~~~~t~~~~~~de~~~~l~~~~~~~~~~~~~i~~v~isSVvp~~~~-------- 71 (256) T PRK13321 2 LLCIDVGNTNIVLGIFDG--DQLVHNWRLPTDTTRTSDELGILLLSLFRHAGLDPEDIRAVVISSVVPPLDY-------- 71 (256) T ss_pred EEEEEECCHHEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCHHH-------- T ss_conf 899998731519999989--9999999965886558789999999999874999767867999724704799-------- Q ss_pred CCCCCHHHHHHHHCCCCEEEECHHHH---HHHHHC-CCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEE Q ss_conf 66669889999828985588212654---320000-158655353024345576667527993176202245431 Q gi|254780280|r 90 HWVIDPEELISRMQFEDVLLINDFEA---QALAIC-SLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVI 160 (348) Q Consensus 90 ~~~~~~~~l~~~~~~~~v~i~ND~~a---~a~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~ 160 (348) T Consensus 72 ---~~~~~~~~~~~~~~~~v~~~~~~~l~~~y~~p~~LG~DR~a~~vaA~~--~~~~~~~iVID~GTA~TiD~v~ 141 (256) T PRK13321 72 ---SLESACKKYFGIKPLVVGPGIKTGLKIRYDNPREVGADRIVNAVAARE--LYPDRNLIVVDFGTATTFDAVS 141 (256) T ss_pred ---HHHHHHHHHHCCCCEECCCCCCCCCEECCCCHHHCCHHHHHHHHHHHH--HCCCCCEEEEECCCCEEEEEEC T ss_conf ---999999998399826538887779636258846547589999999999--6699988999748717999984 |
|
>PRK13326 pantothenate kinase; Reviewed | Back alignment and domain information |
---|
Probab=97.61 E-value=0.0047 Score=36.95 Aligned_cols=133 Identities=17% Similarity=0.284 Sum_probs=69.9 Q ss_pred CCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCC Q ss_conf 77379998575118999987799808899974388735889999999972234565546999730441685564213566 Q gi|254780280|r 12 AFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYHW 91 (348) Q Consensus 12 ~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~~~ 91 (348) T Consensus 6 ~m~-L~IDIGNT~ik~g~~~~--~~l~~~~r~~T~~~~t~d~~~~-~~~~~~~~~i~~viiSSVVP~~~----------- 70 (262) T PRK13326 6 SSQ-LIIDIGNTSISFALYKD--NKMQIFCKLKTKLDLSFDELYS-FLKEKFDFKVNQVFVSSVVPVID----------- 70 (262) T ss_pred CCE-EEEEECCCCEEEEEEEC--CEEEEEEEECCCCCCCHHHHHH-HHHHHCCCCCCEEEEECCCCCHH----------- T ss_conf 665-89998787159999989--9999999970787578999999-99975146898899985682058----------- Q ss_pred CCCHHHHHHHHCCCCEEEECHHHHH----H--HHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEEC Q ss_conf 6698899998289855882126543----2--00001586553530243455766675279931762022454310 Q gi|254780280|r 92 VIDPEELISRMQFEDVLLINDFEAQ----A--LAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIR 161 (348) Q Consensus 92 ~~~~~~l~~~~~~~~v~i~ND~~a~----a--~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~ 161 (348) T Consensus 71 ~~~~~~~~~~~~~~~~~v~~~~~~~l~i~~~~~~~~~lG~DRian~vaA~~--~y~~~~~iIID~GTAtT~d~v~~ 144 (262) T PRK13326 71 KVLINVIFSLYKVKPLFIGFDLNYDLSFNPYNSNKFLLGSDVFANLVGAIE--YYNINDALVVDLGTACTIFAVSR 144 (262) T ss_pred HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--HCCCCCEEEEECCCCEEEEEEEC T ss_conf 999999999859953898578887863021698721365599999999999--66999889997698479999906 |
|
>PRK13319 consensus | Back alignment and domain information |
---|
Probab=97.58 E-value=0.0053 Score=36.67 Aligned_cols=129 Identities=12% Similarity=0.142 Sum_probs=66.0 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHH---HHHHHHHHHC--CCCCCCEEEEEEEEEEECCCEEEECCC Q ss_conf 79998575118999987799808899974388735889---9999999722--345655469997304416855642135 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLE---HAIQEVIYRK--ISIRLRSAFLAIATPIGDQKSFTLTNY 89 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~---~~i~~~l~~~--~~~~~~~igi~v~Gpv~~~~~~~~~~~ 89 (348) T Consensus 2 ~L~iDIGNT~ik~gl~~~--~~l~~~~r~~t~~~~~~~e~~~~~~~~~~~~~~~~~~i~~viisSVvp~~---------- 69 (258) T PRK13319 2 ILVLDVGNTNIVLGVYEG--KELIAHWRISTDRHKTSDEYGMLVKQLFSYNGLSFSDIEGVIISSVVPPI---------- 69 (258) T ss_pred EEEEEECCCCEEEEEEEC--CEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCHHH---------- T ss_conf 899998744169999989--99999999705754677899999999998759986557457984132758---------- Q ss_pred CCCCCHHH-HHHHHCCCCEEEECHHHH---HHHHHC-CCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEE Q ss_conf 66669889-999828985588212654---320000-158655353024345576667527993176202245431 Q gi|254780280|r 90 HWVIDPEE-LISRMQFEDVLLINDFEA---QALAIC-SLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVI 160 (348) Q Consensus 90 ~~~~~~~~-l~~~~~~~~v~i~ND~~a---~a~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~ 160 (348) T Consensus 70 --~~~l~~~~~~~~~~~~~~v~~~~~~~l~~~y~~p~~lG~DR~a~~vaA~~~---~~~~~iVID~GTA~TiD~v~ 140 (258) T PRK13319 70 --MFSLERMCRKYFKIKPLIVGPGIKTGLNIKYDNPKEVGADRIVNAVAAIEL---YGGPLIIVDFGTATTFCAIS 140 (258) T ss_pred --HHHHHHHHHHHHCCCEEEECCCCCCCCEECCCCHHHCCHHHHHHHHHHHHC---CCCCEEEEECCCCEEEEEEC T ss_conf --999999999981996299788776686151588465266899999998641---09999999858707999984 |
|
>PRK13320 pantothenate kinase; Reviewed | Back alignment and domain information |
---|
Probab=97.43 E-value=0.002 Score=39.24 Aligned_cols=122 Identities=14% Similarity=0.208 Sum_probs=59.7 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCCCCC Q ss_conf 79998575118999987799808899974388735889999999972234565546999730441685564213566669 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYHWVID 94 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~~~~~~ 94 (348) T Consensus 5 ~LliDiGNT~iK~~l~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~isSVvp~~~~~------------ 65 (245) T PRK13320 5 NLVIDIGNTTTKIAVFQG--DSVASTFLTSN---KALEESLEPLLSKH--PAIRDAVVCSVVPLAEEA------------ 65 (245) T ss_pred EEEEEECCCCEEEEEEEC--CEEEEEEECCH---HHHHHHHHHHHHHC--CCCCEEEEEECCCHHHHH------------ T ss_conf 999998743139999989--99988774488---99999999999765--999989999677828999------------ Q ss_pred HHHHHHHHCCCCEEEECHHHH----HHHHHCC-CCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEE Q ss_conf 889999828985588212654----3200001-5865535302434557666752799317620224543 Q gi|254780280|r 95 PEELISRMQFEDVLLINDFEA----QALAICS-LSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSV 159 (348) Q Consensus 95 ~~~l~~~~~~~~v~i~ND~~a----~a~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~ 159 (348) T Consensus 66 ~~~~~~~~~--~~~~i~~~~~~~v~~~y~~p~~LG~DR~a~~~aA~~--~~~~~~~iVID~GTAiTiD~v 131 (245) T PRK13320 66 LAALLELLF--AVLFLDSELPLPFRLDYETPETLGADRLALCAGARY--LFPGKAVLAIDAGTAITYDVL 131 (245) T ss_pred HHHHHHHCC--CEEEECCCCCCCCEECCCCHHHCCHHHHHHHHHHHH--HCCCCCEEEEECCCCEEEEEE T ss_conf 999998569--789961777777067368957625789999999999--669999999975872577787 |
|
>PRK13324 pantothenate kinase; Reviewed | Back alignment and domain information |
---|
Probab=97.20 E-value=0.0055 Score=36.54 Aligned_cols=132 Identities=11% Similarity=0.131 Sum_probs=65.0 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHH----HHHHHHHHCC--CCCCCEEEEEEEEEEECCCEEEECC Q ss_conf 799985751189999877998088999743887358899----9999997223--4565546999730441685564213 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEH----AIQEVIYRKI--SIRLRSAFLAIATPIGDQKSFTLTN 88 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~----~i~~~l~~~~--~~~~~~igi~v~Gpv~~~~~~~~~~ 88 (348) T Consensus 2 ~L~IDIGNT~ik~g~~~~--~~~~~~~~~~t~~~~~~~de~~~~l~~~l~~~~v~~~~i~~~~isSVvp~-------~~~ 72 (258) T PRK13324 2 LLVMDMGNSHIHIGVFDG--DRIVSQIRYATSSVDSTSDQMGVFLRQALRENSVDLGKIDGCGISSVVPH-------LNY 72 (258) T ss_pred EEEEEECCCCEEEEEEEC--CEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCEEEEECCCH-------HHH T ss_conf 899998733359999999--99999999977875535889999999999984888655342045300762-------889 Q ss_pred CCCCCCHHHHHHHHCCCCEEEECHHHH--HHHHHC-CCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEEC Q ss_conf 566669889999828985588212654--320000-1586553530243455766675279931762022454310 Q gi|254780280|r 89 YHWVIDPEELISRMQFEDVLLINDFEA--QALAIC-SLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIR 161 (348) Q Consensus 89 ~~~~~~~~~l~~~~~~~~v~i~ND~~a--~a~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~ 161 (348) T Consensus 73 ----~~~~~~~~~~~~~p~~v~~~~~~l~~~~~~p~~lG~DRia~~vaA~--~~~~~~~~iVID~GTA~T~D~v~~ 142 (258) T PRK13324 73 ----SLGSAVIKYFNIKPFFISMDTTDLDMSAVEAHQVGADRIASCISAI--ADHPNKDLLIIDLGTATTFDLVTK 142 (258) T ss_pred ----HHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCHHHHHHHHHHHH--HHCCCCCEEEEECCCCEEEEEECC T ss_conf ----9999999983997889788777886367884316189999999999--847998989997688369999836 |
|
>PRK13328 pantothenate kinase; Reviewed | Back alignment and domain information |
---|
Probab=96.84 E-value=0.032 Score=31.83 Aligned_cols=126 Identities=13% Similarity=0.074 Sum_probs=57.2 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEE-EEEEEECCCEEEECCCCCCC Q ss_conf 79998575118999987799808899974388735889999999972234565546999-73044168556421356666 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLA-IATPIGDQKSFTLTNYHWVI 93 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~-v~Gpv~~~~~~~~~~~~~~~ 93 (348) T Consensus 3 ~L~IDiGNT~ik~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~issV~~~~v~~~----------- 64 (255) T PRK13328 3 ILLIDAGNSRIKWAWADA-GRPWVHSGAFEHARDA----FLAPDWSAL--PRPRGAWISNVAGPAVAAR----------- 64 (255) T ss_pred EEEEEECCCCEEEEEEEC-CEEEEEEEEECCCHHH----HHHHHHHHC--CCCCEEEEEEECCHHHHHH----------- T ss_conf 999997624159999979-9879997323374478----999999864--7877189997476677799----------- Q ss_pred CHHHHHHHHCCCCEEEECHHHH-----HHHHHCC-CCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEE Q ss_conf 9889999828985588212654-----3200001-58655353024345576667527993176202245431 Q gi|254780280|r 94 DPEELISRMQFEDVLLINDFEA-----QALAICS-LSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVI 160 (348) Q Consensus 94 ~~~~l~~~~~~~~v~i~ND~~a-----~a~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~ 160 (348) T Consensus 65 ~~~~l~~~~~~~~~~~~~~~~~~~gv~~~Y~~p~~lG~DR~~~~vaA~~--~~~~~~~iVID~GTA~T~D~V~ 135 (255) T PRK13328 65 IDALLAARWPGLPRTWVRSRAAQCGVTNGYREPAQLGSDRWAGLIGARA--AFPDEHLLIATFGTATTLDALR 135 (255) T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCEECCCCHHHCCHHHHHHHHHHHH--HCCCCCEEEEECCCCEEEEEEC T ss_conf 9999999837898089825764789505689947657789999999999--6699998999858726888973 |
|
>PRK13327 pantothenate kinase; Reviewed | Back alignment and domain information |
---|
Probab=96.55 E-value=0.051 Score=30.56 Aligned_cols=123 Identities=17% Similarity=0.153 Sum_probs=55.3 Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCCC Q ss_conf 73799985751189999877998088999743887358899999999722345655469997304416855642135666 Q gi|254780280|r 13 FPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYHWV 92 (348) Q Consensus 13 ~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~~~~ 92 (348) T Consensus 1 M~~lliDiGNTriKwa~~~~~--~~~~~~~~~~~~-~~~-~--~~~~~~~~~~~-~~~vssV~~~~~~~~l--------- 64 (242) T PRK13327 1 MSEWLFDLGNSRFKYAPLHGN--RAGDVQAWAHGA-EAM-D--AAALAALPSGR-VAYVASVAAPALTQRV--------- 64 (242) T ss_pred CCCEEEEECCCHHEEEEECCC--CCCEEEECCCCC-HHH-H--HHHHHHCCCCC-EEEEEECCCHHHHHHH--------- T ss_conf 972789966763248997089--640233214550-455-4--45565188676-5999985668889999--------- Q ss_pred CCHHHHHHHHCCCCEEEECHH-H----HHHHHHC-CCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEE Q ss_conf 698899998289855882126-5----4320000-158655353024345576667527993176202245431 Q gi|254780280|r 93 IDPEELISRMQFEDVLLINDF-E----AQALAIC-SLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVI 160 (348) Q Consensus 93 ~~~~~l~~~~~~~~v~i~ND~-~----a~a~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~ 160 (348) T Consensus 65 --~~~l~~~~~--~~~~~~~~~~~~gv~n~Y~~p~~LG~DRw~a~iaA~-----~~~p~lViD~GTA~TiD~v~ 129 (242) T PRK13327 65 --LACLQERFE--QVRVVRTAAACAGVRIAYADPSRFGVDRFLALLGAR-----GDAPVLVAGVGTALTIDVLG 129 (242) T ss_pred --HHHHHHHCC--CCEEEECCCCCCCCEECCCCHHHHCHHHHHHHHHHC-----CCCCEEEEECCCEEEEEEEC T ss_conf --999997379--856994154358831078995880678999997503-----48998999727727899986 |
|
>PRK13323 consensus | Back alignment and domain information |
---|
Probab=96.35 E-value=0.068 Score=29.81 Aligned_cols=129 Identities=13% Similarity=0.077 Sum_probs=61.7 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHH---HHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCC Q ss_conf 799985751189999877998088999743887358899---99999972234565546999730441685564213566 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEH---AIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYHW 91 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~---~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~~~ 91 (348) T Consensus 2 ~L~iDIGNT~ik~gl~~~--~~~~~~~r~~t~~~~~~de~~~~~~~~~~~-~~~~i~~v~~sSVVp~-------~~---- 67 (258) T PRK13323 2 LLAIDVGNTHTVVGLFDG--AKVVQQWRIRTESEVTADELALTIDGLLGE-DSERLTGVAICSTVPS-------VL---- 67 (258) T ss_pred EEEEEECCCCEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHH-CCCCCCEEEEECCCHH-------HH---- T ss_conf 899998863039999989--999999996378756889999999997422-3222331799705777-------79---- Q ss_pred CCCHHHHHHHHCCCCEEEEC-HHHH---HHHHHC-CCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEE Q ss_conf 66988999982898558821-2654---320000-158655353024345576667527993176202245431 Q gi|254780280|r 92 VIDPEELISRMQFEDVLLIN-DFEA---QALAIC-SLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVI 160 (348) Q Consensus 92 ~~~~~~l~~~~~~~~v~i~N-D~~a---~a~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~ 160 (348) T Consensus 68 ~~~~~~~~~~~~~~~~~~v~~~~~~~i~~~~~~p~~lG~DR~a~~vaA~~~~---~~~~iVID~GTA~T~d~v~ 138 (258) T PRK13323 68 HEVRIMLVQYWPDVPHVLVEPGVRTGIPILVDNPKEVGADRIVNCLAAYHLY---GGPAIVVDFGTSTTFDVVS 138 (258) T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHH---CCCEEEEECCCCEEEEEEC T ss_conf 9999999998489997996678667873605895772589999999999972---9988999858725899984 |
|
>PRK13330 consensus | Back alignment and domain information |
---|
Probab=95.81 E-value=0.056 Score=30.34 Aligned_cols=131 Identities=14% Similarity=0.146 Sum_probs=56.8 Q ss_pred EEEEEECCCCEEEEEEECCCCEE-EEEEEECCCCCCC---HHHHHHHHHHHCC--CCCCCEEEEEEEEEEECCCEEEECC Q ss_conf 79998575118999987799808-8999743887358---8999999997223--4565546999730441685564213 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEP-EFCCTVQTSDYEN---LEHAIQEVIYRKI--SIRLRSAFLAIATPIGDQKSFTLTN 88 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i-~~~~~~~t~~~~~---~~~~i~~~l~~~~--~~~~~~igi~v~Gpv~~~~~~~~~~ 88 (348) T Consensus 2 ~L~iDIGNT~i~~glf~~~-~~i~~~~~~~~t~~~~t~de~~~~~~~~l~~~~~~~~~i~~~i~sSVVP~---------- 70 (257) T PRK13330 2 LLVVDVGNTNTVFGIFENG-KKIPLFHKRTVTRKDRTSDELGLFFRGFLREFKIENEAITGGIYSSVVPT---------- 70 (257) T ss_pred EEEEEECCCCEEEEEEECC-EEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCCEEEECCCCC---------- T ss_conf 7999977880699999899-79999998630584205789999999999883995322014277253665---------- Q ss_pred CCCCCCHHHHHHHHCCCCEEEECHHHH---HHHHHC-CCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEE Q ss_conf 566669889999828985588212654---320000-158655353024345576667527993176202245431 Q gi|254780280|r 89 YHWVIDPEELISRMQFEDVLLINDFEA---QALAIC-SLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVI 160 (348) Q Consensus 89 ~~~~~~~~~l~~~~~~~~v~i~ND~~a---~a~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~ 160 (348) T Consensus 71 l~-~~~~~~~~~~~~~~~~~v~~~~~~~~~i~~~~p~~lG~DRia~avaa~~--~-~~~~~iVVD~GTAtT~dvv~ 142 (257) T PRK13330 71 LN-PILDRMFQDWFKIEAIRVHYQMKLPFSISYPRPYEIGADRLVNAAACAI--D-FPGKFIIIDLGTATTFCVVN 142 (257) T ss_pred HH-HHHHHHHHHHCCCCEEEECCCCCCCCEECCCCHHHCCHHHHHHHHHHHH--H-CCCCEEEEECCCCEEEEEEC T ss_conf 59-9999999997198779977888778446058846606789999999998--6-79987999858825999994 |
|
>pfam03309 Bvg_acc_factor Bordetella pertussis Bvg accessory factor family | Back alignment and domain information |
---|
Probab=95.76 E-value=0.077 Score=29.46 Aligned_cols=129 Identities=15% Similarity=0.129 Sum_probs=63.6 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCC---HHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCC Q ss_conf 799985751189999877998088999743887358---89999999972234565546999730441685564213566 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYEN---LEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYHW 91 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~---~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~~~ 91 (348) T Consensus 1 ~L~IDiGNT~iK~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~i~isSVvp~~~~---------- 66 (206) T pfam03309 1 LLLIDIGNTNIKWGLFDG--DKLVAGWRISTAANRTADELGSLLLQLLALAG--LDPGVIISSVVPPLLA---------- 66 (206) T ss_pred CEEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHCC--CCCCEEEEECCCHHHH---------- T ss_conf 989997655069999989--99999999647765788999999999997469--9984999978867999---------- Q ss_pred CCCHHHHHHHHCCCCEEEECH-HHH---HHHHHC-CCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEE Q ss_conf 669889999828985588212-654---320000-158655353024345576667527993176202245431 Q gi|254780280|r 92 VIDPEELISRMQFEDVLLIND-FEA---QALAIC-SLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVI 160 (348) Q Consensus 92 ~~~~~~l~~~~~~~~v~i~ND-~~a---~a~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~ 160 (348) T Consensus 67 -~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Y~~p~~LG~DR~~~~~aA~~--~~~~~~~iVID~GTA~T~D~v~ 137 (206) T pfam03309 67 -ALLEALLKYFGIEPLVVGSPGVKTGLRNGYDNPKELGADRWAAAVAARE--LYPGKPLIVVDFGTATTFDVVS 137 (206) T ss_pred -HHHHHHHHHHCCCEEEEECCCCCCCCEEECCCHHHCCHHHHHHHHHHHH--HCCCCCEEEEECCCCEEEEEEC T ss_conf -9999999970997299957777768568059947647689999999998--6699988999768842778985 |
|
>COG3426 Butyrate kinase [Energy production and conversion] | Back alignment and domain information |
---|
Probab=97.46 E-value=0.0058 Score=36.43 Aligned_cols=95 Identities=13% Similarity=0.236 Sum_probs=59.4 Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEE Q ss_conf 998836895799999999999999999999974899-7389965677655677276489999883798378897388799 Q gi|254780280|r 234 DIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMAR-GGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYV 312 (348) Q Consensus 234 ~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~-~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~ 312 (348) T Consensus 261 ~~~~~~Gd~~a~~~~~AmayQVaKeIG~~savL~G~vDaIvLTGGiA~~-------~~f~~~I~~---~v~~iapv~v~P 330 (358) T COG3426 261 ERRIEQGDEKAKLAYEAMAYQVAKEIGAMSAVLKGKVDAIVLTGGIAYE-------KLFVDAIED---RVSWIAPVIVYP 330 (358) T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH-------HHHHHHHHH---HHHHHCCEEECC T ss_conf 9999713199999999999999999876664307987779971611547-------999999999---886623157617 Q ss_pred EECC-CCHHHHHHHHHHCCCCCCCCCC Q ss_conf 9578-7227759998738001244457 Q gi|254780280|r 313 ITNP-YIAIAGMVSYIKMTDCFNLFIS 338 (348) Q Consensus 313 ~~~~-~agl~GAa~~~r~~~~~~~~~~ 338 (348) T Consensus 331 GE~EleALA~G~lRVL~GeEk~k~y~~ 357 (358) T COG3426 331 GEDELEALAEGALRVLRGEEKAKEYRP 357 (358) T ss_pred CCHHHHHHHHHHHHHHHCCHHCCCCCC T ss_conf 806899998633788635221233678 |
|
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
---|
Probab=97.25 E-value=0.0033 Score=37.95 Aligned_cols=75 Identities=12% Similarity=0.045 Sum_probs=45.3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCH- Q ss_conf 57999999999999999999999748-9973899656776556772764899998837983788973887999578722- Q gi|254780280|r 242 PIALKAINLFCEYLGRVAGDLALIFM-ARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIA- 319 (348) Q Consensus 242 ~~A~~~~~~~~~~lg~~i~~l~~~~~-p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~ag- 319 (348) T Consensus 374 ~l~ravlEgva~~l~~~~~~l~~~~g~~~~~i~~~GGgars-------~~w~Qi~------Ad~~-g~~v~~~~~~e~~a 439 (502) T COG1070 374 HLARAVLEGVAFALADGLEALEELGGKPPSRVRVVGGGARS-------PLWLQIL------ADAL-GLPVVVPEVEEAGA 439 (502) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC-------HHHHHHH------HHHH-CCCEEECCCCCHHH T ss_conf 99999999999999999999998529997779997763157-------9999999------9986-89667247510679 Q ss_pred HHHHHHHHHCC Q ss_conf 77599987380 Q gi|254780280|r 320 IAGMVSYIKMT 330 (348) Q Consensus 320 l~GAa~~~r~~ 330 (348) T Consensus 440 ~g~A~~~~~~~ 450 (502) T COG1070 440 LGGAALAAAAL 450 (502) T ss_pred HHHHHHHHHHH T ss_conf 99999999970 |
|
>PRK00047 glpK glycerol kinase; Provisional | Back alignment and domain information |
---|
Probab=97.09 E-value=0.0044 Score=37.18 Aligned_cols=74 Identities=7% Similarity=0.022 Sum_probs=41.5 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCH Q ss_conf 579999999999999999999997--489973899656776556772764899998837983788973887999578722 Q gi|254780280|r 242 PIALKAINLFCEYLGRVAGDLALI--FMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIA 319 (348) Q Consensus 242 ~~A~~~~~~~~~~lg~~i~~l~~~--~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~ag 319 (348) T Consensus 376 ~l~RAvlEGiaf~~r~~~e~l~~~~G~~~~-~i~~~GGga~s-------~lw~Qi~------ADvl-g~pV~~~~~~e~~ 440 (498) T PRK00047 376 HIIRATLESIAYQTRDVLDAMQADSGIRLK-ELRVDGGAVAN-------NFLMQFQ------ADIL-GVDVERPVVAETT 440 (498) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-EEEEECCCHHC-------HHHHHHH------HHHH-CCEEEECCCCCCH T ss_conf 999899999999999999999986298967-79996680347-------8999999------9976-9848946888617 Q ss_pred HHHHHHHHHCC Q ss_conf 77599987380 Q gi|254780280|r 320 IAGMVSYIKMT 330 (348) Q Consensus 320 l~GAa~~~r~~ 330 (348) T Consensus 441 alGaAilAava 451 (498) T PRK00047 441 ALGAAYLAGLA 451 (498) T ss_pred HHHHHHHHHHH T ss_conf 99999999988 |
|
>PRK10331 L-fuculokinase; Provisional | Back alignment and domain information |
---|
Probab=96.91 E-value=0.007 Score=35.91 Aligned_cols=82 Identities=17% Similarity=0.134 Sum_probs=44.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHH Q ss_conf 79999999999999999999997--4899738996567765567727648999988379837889738879995787227 Q gi|254780280|r 243 IALKAINLFCEYLGRVAGDLALI--FMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAI 320 (348) Q Consensus 243 ~A~~~~~~~~~~lg~~i~~l~~~--~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl 320 (348) T Consensus 363 l~rA~lEgia~~~r~~le~l~~~~~~~~~-~i~~~GGgs~s-------~~w~Qi~------ADv~-g~pV~~~~~~e~~a 427 (470) T PRK10331 363 FYRAALEGLTAQLKRNLQVLEKIGHFKAT-ELLLVGGGSRN-------ALWNQIK------ANML-DIPIKVLDDAETTV 427 (470) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCC-EEEEECCHHHC-------HHHHHHH------HHHH-CCEEEECCCCCHHH T ss_conf 99999999999999999999984399978-79997871337-------9999999------9986-98589479885489 Q ss_pred HHHHHHHHCCCCCCCCCCC Q ss_conf 7599987380012444575 Q gi|254780280|r 321 AGMVSYIKMTDCFNLFISE 339 (348) Q Consensus 321 ~GAa~~~r~~~~~~~~~~~ 339 (348) T Consensus 428 lGaA~la~~a~G~~~~~~e 446 (470) T PRK10331 428 AGAAMFGWYGVGEFSSPEQ 446 (470) T ss_pred HHHHHHHHHHCCCCCCHHH T ss_conf 9999999998298899999 |
|
>PRK00290 dnaK molecular chaperone DnaK; Provisional | Back alignment and domain information |
---|
Probab=96.72 E-value=0.039 Score=31.30 Aligned_cols=76 Identities=13% Similarity=0.115 Sum_probs=40.7 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHH Q ss_conf 95799999999999999999999974899738996567765567727648999988379837889738879995787227 Q gi|254780280|r 241 DPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAI 320 (348) Q Consensus 241 D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl 320 (348) T Consensus 301 E~l~~~l~~r~~~~v~~aL~~A~l~~~dId~ViLVGGsTRi--P~Vq~--~v~~~Fgk~---------~~~~inPDeaVA 367 (631) T PRK00290 301 EELTEDLVERTIEPCRQALKDAGLSVSDIDEVILVGGSTRM--PAVQE--LVKEFFGKE---------PNKGVNPDEVVA 367 (631) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCC--HHHHH--HHHHHHCCC---------CCCCCCCHHHHH T ss_conf 99899999999999999999808982221599991782456--79999--999996889---------777969126899 Q ss_pred HHHHHHHHC Q ss_conf 759998738 Q gi|254780280|r 321 AGMVSYIKM 329 (348) Q Consensus 321 ~GAa~~~r~ 329 (348) T Consensus 368 ~GAAiqa~i 376 (631) T PRK00290 368 VGAAIQGGV 376 (631) T ss_pred HHHHHHHHH T ss_conf 879999988 |
|
>PRK04123 ribulokinase; Provisional | Back alignment and domain information |
---|
Probab=96.47 E-value=0.019 Score=33.25 Aligned_cols=76 Identities=13% Similarity=0.097 Sum_probs=40.1 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHH Q ss_conf 57999999999999999999999748997389965677655677276489999883798378897388799957872277 Q gi|254780280|r 242 PIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIA 321 (348) Q Consensus 242 ~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~ 321 (348) T Consensus 412 ~l~RAvlEGiaf~~r~~~d~l~~~g~~~~~i~~~GGga~ks------~~w~Qi~------ADvl-g~pv~~~~~~e~~al 478 (542) T PRK04123 412 DIYRALIEATAFGTRAIMECFEDQGVPVNNVIALGGIARKN------PVIMQIY------ADVL-NRPIQVVASDQCPAL 478 (542) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC------HHHHHHH------HHHH-CCEEEECCCCCHHHH T ss_conf 99999999999999999999997398957699967986608------8999999------9976-981896688860799 Q ss_pred HHHHHHHCC Q ss_conf 599987380 Q gi|254780280|r 322 GMVSYIKMT 330 (348) Q Consensus 322 GAa~~~r~~ 330 (348) T Consensus 479 GAA~lAa~a 487 (542) T PRK04123 479 GAAIFAAVA 487 (542) T ss_pred HHHHHHHHH T ss_conf 999999998 |
|
>PTZ00294 glycerol kinase; Provisional | Back alignment and domain information |
---|
Probab=96.34 E-value=0.026 Score=32.36 Aligned_cols=72 Identities=11% Similarity=0.076 Sum_probs=39.5 Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHH Q ss_conf 7999999999999999999999--74899738996567765567727648999988379837889738879995787227 Q gi|254780280|r 243 IALKAINLFCEYLGRVAGDLAL--IFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAI 320 (348) Q Consensus 243 ~A~~~~~~~~~~lg~~i~~l~~--~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl 320 (348) T Consensus 387 i~RAvlEgia~~~r~~~e~l~~~~G~~~~-~I~~~GG~a~s-------~lw~Qi~------ADv~-g~pV~~~~~~e~~a 451 (510) T PTZ00294 387 IIRAALEAIALQLNDVVLAMKRDSGIELN-SLRVDGGLTKN-------KLLMQIQ------ADIL-GVKLEVPEMHETTA 451 (510) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCC-EEEEECCCHHC-------HHHHHHH------HHHH-CCEEEECCCCCHHH T ss_conf 99999998999999999999986099978-79997783238-------9999999------9965-98479468887089 Q ss_pred HHHHHHHHC Q ss_conf 759998738 Q gi|254780280|r 321 AGMVSYIKM 329 (348) Q Consensus 321 ~GAa~~~r~ 329 (348) T Consensus 452 lGaAilAav 460 (510) T PTZ00294 452 LGAALCAGL 460 (510) T ss_pred HHHHHHHHH T ss_conf 999999999 |
|
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional | Back alignment and domain information |
---|
Probab=96.19 E-value=0.028 Score=32.22 Aligned_cols=75 Identities=8% Similarity=0.003 Sum_probs=42.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHH Q ss_conf 79999999999999999999997--4899738996567765567727648999988379837889738879995787227 Q gi|254780280|r 243 IALKAINLFCEYLGRVAGDLALI--FMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAI 320 (348) Q Consensus 243 ~A~~~~~~~~~~lg~~i~~l~~~--~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl 320 (348) T Consensus 384 l~RAvlEgia~~~r~~l~~~~~~~g~~~~~-i~~~GGgsks-------~lw~Qi~------ADv~-g~pV~~~~~~e~~a 448 (521) T PRK10939 384 LFRALEENAAIVSACNLQQIAAFSGVFPSS-LVFAGGGSKG-------KLWSQIL------ADVT-GLPVKVPVVKEATA 448 (521) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCE-EEEECCCCCC-------HHHHHHH------HHHH-CCEEEECCCCCHHH T ss_conf 999999879999998999999843999897-9998964017-------9999999------8866-98179478775299 Q ss_pred HHHHHHHHCCCC Q ss_conf 759998738001 Q gi|254780280|r 321 AGMVSYIKMTDC 332 (348) Q Consensus 321 ~GAa~~~r~~~~ 332 (348) T Consensus 449 lGaA~lAa~a~G 460 (521) T PRK10939 449 LGCAIAAGVGAG 460 (521) T ss_pred HHHHHHHHHHHC T ss_conf 999999999838 |
|
>PRK09604 putative DNA-binding/iron metalloprotein/AP endonuclease; Reviewed | Back alignment and domain information |
---|
Probab=95.72 E-value=0.13 Score=28.02 Aligned_cols=94 Identities=16% Similarity=0.152 Sum_probs=59.5 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEE----ECCCC Q ss_conf 79999999999999999999997489973899656776556772764899998837983788973887999----57872 Q gi|254780280|r 243 IALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVI----TNPYI 318 (348) Q Consensus 243 ~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~----~~~~a 318 (348) T Consensus 234 iaasfQ~~i~~~L~~k~~~A~~~~~~k~-lvv~GGVaaN--~~L-----R~~l~~---~~~-~~~~~~~~P~~~~ctDNA 301 (335) T PRK09604 234 IAASFQEAVVDVLVEKTKRALKKTGVKT-LVVAGGVAAN--SYL-----REKLAE---LCK-KRGIEVYIPPLELCTDNG 301 (335) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECCHHHH--HHH-----HHHHHH---HHH-HCCCEEEECCHHHCCHHH T ss_conf 9999999999999999999999979987-9994647777--999-----999999---999-749989808979751479 Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCC Q ss_conf 277599987380012444575311001379 Q gi|254780280|r 319 AIAGMVSYIKMTDCFNLFISEGIKRRWFKD 348 (348) Q Consensus 319 gl~GAa~~~r~~~~~~~~~~~~~~~~~~~~ 348 (348) T Consensus 302 aMIA~ag~~~~~~g~~~~l~~~~~prw~ld 331 (335) T PRK09604 302 AMIAYAGAERYKKGPFSPLDLNVRPRWPLD 331 (335) T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCC T ss_conf 999999999997599999976223799721 |
|
>TIGR02628 fuculo_kin_coli L-fuculokinase; InterPro: IPR013450 Proteins in this entry are L-fuculokinases from the clade that includes the Escherichia coli enzyme P11553 from SWISSPROT | Back alignment and domain information |
---|
Probab=95.00 E-value=0.11 Score=28.60 Aligned_cols=80 Identities=20% Similarity=0.194 Sum_probs=50.7 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCH Q ss_conf 57999999999999999999999--7489973899656776556772764899998837983788973887999578722 Q gi|254780280|r 242 PIALKAINLFCEYLGRVAGDLAL--IFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIA 319 (348) Q Consensus 242 ~~A~~~~~~~~~~lg~~i~~l~~--~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~ag 319 (348) T Consensus 374 ~iyraalegl~~qLk~~l~~L~~~~qf~a~~l~~VGGGskN~----LWN-Qir---------An~L-~~p~~vvd~aE~T 438 (473) T TIGR02628 374 EIYRAALEGLAKQLKRRLDVLEQVSQFKAKELVVVGGGSKNV----LWN-QIR---------ANAL-DLPVKVVDDAEAT 438 (473) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCH----HHH-HHH---------HHHH-CCCHHHHHHHHHH T ss_conf 899999999999987423578776311377568961785211----467-866---------7665-0870001200257 Q ss_pred HHHHHHHHHCCCCCCCC Q ss_conf 77599987380012444 Q gi|254780280|r 320 IAGMVSYIKMTDCFNLF 336 (348) Q Consensus 320 l~GAa~~~r~~~~~~~~ 336 (348) T Consensus 439 V~GAAmF~f~GvG~y~~ 455 (473) T TIGR02628 439 VLGAAMFAFAGVGIYED 455 (473) T ss_pred HHHHHHHHCCCCCCCCC T ss_conf 89999976224644389 |
They catalyze the second step in fucose catabolism and belong to the FGGY family of carbohydrate kinases. These enzymes are encoded by the kinase (K) gene of the fucose (fuc) operon.; GO: 0008737 L-fuculokinase activity, 0005975 carbohydrate metabolic process. |
>PRK00976 hypothetical protein; Provisional | Back alignment and domain information |
---|
Probab=94.25 E-value=0.13 Score=28.10 Aligned_cols=83 Identities=16% Similarity=0.145 Sum_probs=58.6 Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEE Q ss_conf 99883689579999999999999999999997489973899656776556772764899998837983788973887999 Q gi|254780280|r 234 DIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVI 313 (348) Q Consensus 234 ~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~ 313 (348) T Consensus 228 l~~~~~~d~~~~la~dtl~~~vaMEiasl~~-l~~~~~V~LaGS~g~~~~-----~~v~~------~i~~~l~~-~~-~v 293 (324) T PRK00976 228 LENYEKGDEKAKLALDTLALFVAMEIASLLL-LNPDANVVLAGSVGEMDE-----PNVAE------RIKELLDG-NV-LV 293 (324) T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCCCCEEEECCCCCCCC-----CCHHH------HHHHHHCC-CC-EE T ss_conf 9987558815667788999999999977750-367888798413334567-----44889------99998668-83-87 Q ss_pred ECCCCHHHHHHHHHHCC Q ss_conf 57872277599987380 Q gi|254780280|r 314 TNPYIAIAGMVSYIKMT 330 (348) Q Consensus 314 ~~~~agl~GAa~~~r~~ 330 (348) T Consensus 294 l~~~saAiG~A~IArDI 310 (324) T PRK00976 294 LGKWSAAIGLALIARDI 310 (324) T ss_pred ECHHHHHHHHHHHHHHH T ss_conf 35566665689999998 |
|
>pfam03727 Hexokinase_2 Hexokinase | Back alignment and domain information |
---|
Probab=91.99 E-value=0.76 Score=23.31 Aligned_cols=78 Identities=9% Similarity=0.031 Sum_probs=48.6 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEE Q ss_conf 579999999999999999999997489-------9738996567765567727648999988379837889738879995 Q gi|254780280|r 242 PIALKAINLFCEYLGRVAGDLALIFMA-------RGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVIT 314 (348) Q Consensus 242 ~~A~~~~~~~~~~lg~~i~~l~~~~~p-------~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~ 314 (348) T Consensus 151 ~i~~~V~~RaA~L~Aa~iaai~~k~~~~~~~~~~~~~V~vDGSv~~~~------P~f~~~~~~~--l~~l~~~~~v~~~~ 222 (238) T pfam03727 151 RVCEAVSTRAARLCAAGLAAILQKIRENRGYEHLKVTVGVDGSVYKLY------PGFKERLAET--LRDLAPDCDVSIIP 222 (238) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHCC------CHHHHHHHHH--HHHHCCCCCEEEEE T ss_conf 999999999999999999999998410236667616998437043307------1589999999--99977997479998 Q ss_pred CCCCHHHHHHHHH Q ss_conf 7872277599987 Q gi|254780280|r 315 NPYIAIAGMVSYI 327 (348) Q Consensus 315 ~~~agl~GAa~~~ 327 (348) T Consensus 223 a~DGSG~GAAl~A 235 (238) T pfam03727 223 AEDGSGKGAALVA 235 (238) T ss_pred ECCCHHHHHHHHH T ss_conf 0587289999998 |
Hexokinase (EC:2.7.1.1) contains two structurally similar domains represented by this family and pfam00349. Some members of the family have two copies of each of these domains. |
>TIGR01312 XylB xylulokinase; InterPro: IPR006000 The ability to metabolise xylose, one of the most abundant sugars in nature, is dependent on its conversion to xylulose-5-phosphate, which then enters the non-oxidative pentose phosphate pathway | Back alignment and domain information |
---|
Probab=91.83 E-value=0.8 Score=23.20 Aligned_cols=78 Identities=12% Similarity=0.051 Sum_probs=48.0 Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHH-H-HCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEE Q ss_conf 88368957999999999999999999999-7-489973899656776556772764899998837983788973887999 Q gi|254780280|r 236 VSKSEDPIALKAINLFCEYLGRVAGDLAL-I-FMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVI 313 (348) Q Consensus 236 ~~~~~D~~A~~~~~~~~~~lg~~i~~l~~-~-~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~ 313 (348) T Consensus 365 ~~~~r~~l~RAv~EG~~F~l~dsl~~~~~~~g~~~~~-i~lIGGGakS~~-W------~Q------~~ADI~-g~~v~~~ 429 (494) T TIGR01312 365 ANTTRADLTRAVLEGVTFALRDSLDILRELNGLPINE-IRLIGGGAKSPV-W------RQ------ILADIF-GLPVVVP 429 (494) T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE-EEEEECCCHHHH-H------HH------HHHHHH-CCEEEEE T ss_conf 3148789999999999999999999999815994005-888705644678-9------99------999981-8815751 Q ss_pred E-CCCCHHHHHHHHHH Q ss_conf 5-78722775999873 Q gi|254780280|r 314 T-NPYIAIAGMVSYIK 328 (348) Q Consensus 314 ~-~~~agl~GAa~~~r 328 (348) T Consensus 430 ~g~~eg~ALGAA~lA~ 445 (494) T TIGR01312 430 EGGEEGAALGAAILAA 445 (494) T ss_pred CCCHHHHHHHHHHHHH T ss_conf 6701100179999999 |
Xylulose-5-phosphate is produced from xylose by the sequential action of two enzymes; xylose isomerase, which converts xylose to xylulose, and xylulokinase, which subsequently phosphorylates xylulose. This entry represents bacterial xylulokinase. In addition to its role in xylose metabolism this enzyme may also have a biosynthetic role. 1-deoxy-D-xylulose 5-phosphate serves as a precursor for the biosynthesis of the vitamins thiamine and pyridoxal and for the formation of isopentenyl pyrophosphate and dimethylallyl pyrophosphate via the nonmevalonate pathway of terpenoid biosynthesis. Xylulokinase catalyses the phosphorylation of 1-deoxy-D-xylulose at the hydroxy group of C-5 . This reaction therefore constitutes a potential salvage pathway for the generation of 1-deoxy-D-xylulose 5-phosphate from exogenous or endogenous 1-deoxy-D-xylulose as starting material for the biosynthesis of terpenoids, thiamine and pyridoxal. ; GO: 0004856 xylulokinase activity, 0005997 xylulose metabolic process. |
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12 | Back alignment and domain information |
---|
Probab=90.03 E-value=0.95 Score=22.73 Aligned_cols=81 Identities=14% Similarity=0.094 Sum_probs=56.7 Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCC Q ss_conf 36895799999999999999999999974899738996567765567727648999988379837889738879995787 Q gi|254780280|r 238 KSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPY 317 (348) Q Consensus 238 ~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~ 317 (348) T Consensus 232 ~~~~e~~~la~dtl~m~vaMEiasl~~L~~~~~~v~lags~Gs~~~p----~~~~~------~i~~~l~~-~~-~vl~~~ 299 (326) T TIGR03281 232 YNGDEPGRLALDSLAMSVAMEIASLGLLDCKEAGVVLAGSGGTLREP----INFSG------KIKRVLSC-KV-LVLDSE 299 (326) T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCCCC----HHHHH------HHHHHHCC-CC-EEECHH T ss_conf 33785056778899999999997531442798877986113234781----66899------99998579-80-873666 Q ss_pred CHHHHHHHHHHCC Q ss_conf 2277599987380 Q gi|254780280|r 318 IAIAGMVSYIKMT 330 (348) Q Consensus 318 agl~GAa~~~r~~ 330 (348) T Consensus 300 saAiG~A~IArDI 312 (326) T TIGR03281 300 SAAIGLALIAEDI 312 (326) T ss_pred HHHHHHHHHHHHH T ss_conf 7765689999998 |
Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. |
>pfam00349 Hexokinase_1 Hexokinase | Back alignment and domain information |
---|
Probab=97.39 E-value=0.0026 Score=38.52 Aligned_cols=65 Identities=17% Similarity=0.222 Sum_probs=35.6 Q ss_pred EEEEEECCCCEEEEEEECCCCEE-E-EEEEECCC------CCCCHH----HHHHHHHHHCCC---CCCCEEEEEEEEEEE Q ss_conf 79998575118999987799808-8-99974388------735889----999999972234---565546999730441 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEP-E-FCCTVQTS------DYENLE----HAIQEVIYRKIS---IRLRSAFLAIATPIG 79 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i-~-~~~~~~t~------~~~~~~----~~i~~~l~~~~~---~~~~~igi~v~Gpv~ 79 (348) T Consensus 64 ~lAlDlGGTN~RV~~V~L~g~~~~~~~~~~~~ip~~~~~~t~~eLFd~iA~~i~~fv~~~~~~~~~~~lplGfTFSFP~~ 143 (205) T pfam00349 64 FLALDLGGTNFRVLLVKLTGNGKVEMTQSKYRLPEELMTGTGEQLFDFIADCLKDFMDEQFPLGKKEPLPLGFTFSFPCS 143 (205) T ss_pred EEEEEECCCEEEEEEEEECCCCCEEEEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEE T ss_conf 99996068548999999769984899999888896771498899999999999999998367776660211125502567 |
Hexokinase (EC:2.7.1.1) contains two structurally similar domains represented by this family and pfam03727. Some members of the family have two copies of each of these domains. |
>PRK13331 pantothenate kinase; Reviewed | Back alignment and domain information |
---|
Probab=96.74 E-value=0.038 Score=31.37 Aligned_cols=43 Identities=7% Similarity=0.053 Sum_probs=29.3 Q ss_pred CEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHH Q ss_conf 379998575118999987799808899974388735889999999 Q gi|254780280|r 14 PVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEV 58 (348) Q Consensus 14 ~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~ 58 (348) T Consensus 8 ~~L~IDIGNT~ik~g~f~~--~~l~~~~~~~~~~~~~~~~~~~~~ 50 (251) T PRK13331 8 QWLALMIGNSRLHWGYFSG--ETLVQTWDTPHLHESVIQQLLPTH 50 (251) T ss_pred EEEEEEECCCCEEEEEEEC--CEEEEEEEECCCHHHHHHHHHHHH T ss_conf 2799997644159999989--998898883466244478999999 |
|
>COG5146 PanK Pantothenate kinase, acetyl-CoA regulated [Coenzyme metabolism] | Back alignment and domain information |
---|
Probab=96.56 E-value=0.051 Score=30.59 Aligned_cols=55 Identities=18% Similarity=0.212 Sum_probs=31.8 Q ss_pred CCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCC Q ss_conf 773799985751189999877998088999743887358899999999722345655 Q gi|254780280|r 12 AFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLR 68 (348) Q Consensus 12 ~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~ 68 (348) T Consensus 18 ~~~-vaiDiGGtLaKvv~-sp~~snrl~F~t~eT~kId~~ve~l~~li~~h~k~C~~ 72 (342) T COG5146 18 VMK-VAIDIGGTLAKVVQ-SPSQSNRLTFKTEETKKIDQVVEWLNNLIQQHEKLCLT 72 (342) T ss_pred EEE-EEEECCCEEEEEEE-CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 479-99824866544355-76656602442175661999999999999999864421 |
|
>pfam05378 Hydant_A_N Hydantoinase/oxoprolinase N-terminal region | Back alignment and domain information |
---|
Probab=96.55 E-value=0.0071 Score=35.88 Aligned_cols=45 Identities=22% Similarity=0.245 Sum_probs=27.9 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCCC---CCCHHHHHHHHHH Q ss_conf 799985751189999877998088999743887---3588999999997 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSD---YENLEHAIQEVIY 60 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~---~~~~~~~i~~~l~ 60 (348) T Consensus 1 RiGIDvGGTfTD~V~~d~~~~-~~~~~K~~Tt~~d~~~gi~~al~~~~~ 48 (175) T pfam05378 1 RIGIDVGGTFTDAVALDEGDG-VVATLKVLTTPDDPLEGIRNALEELLG 48 (175) T ss_pred CEEEECCCCCEEEEEEECCCC-EEEEEECCCCCCCHHHHHHHHHHHHHH T ss_conf 958975757688999979999-899998689972488999999999984 |
This family is found at the N-terminus of the pfam01968 family. |
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] | Back alignment and domain information |
---|
Probab=96.55 E-value=0.051 Score=30.55 Aligned_cols=64 Identities=17% Similarity=0.088 Sum_probs=43.3 Q ss_pred CCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEE Q ss_conf 77379998575118999987799808899974388735889999999972234565546999730 Q gi|254780280|r 12 AFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIAT 76 (348) Q Consensus 12 ~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~G 76 (348) T Consensus 134 ~~~~LGID~GSTtTK~VLm~d-~~~I~~~~~~~t~g~p~~~~~l~~~le~l~~~~~~I~~~~~TG 197 (396) T COG1924 134 GMYTLGIDSGSTTTKAVLMED-GKEILYGFYVSTKGRPIAEKALKEALEELGEKLEEILGLGVTG 197 (396) T ss_pred CCEEEEEECCCCCEEEEEEEC-CCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHEEEEEEEEC T ss_conf 867997623874135999837-9757888997578876689999999998064712122243221 |
|
>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] | Back alignment and domain information |
---|
Probab=96.42 E-value=0.0068 Score=35.99 Aligned_cols=63 Identities=16% Similarity=0.215 Sum_probs=41.9 Q ss_pred CCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECC-CCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEE Q ss_conf 67737999857511899998779980889997438-87358899999999722345655469997304 Q gi|254780280|r 11 IAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQT-SDYENLEHAIQEVIYRKISIRLRSAFLAIATP 77 (348) Q Consensus 11 ~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t-~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gp 77 (348) T Consensus 1 ~~~kilGiDIGGAntk~a~~D-G~~~~~d~~YlPMWk~k~rL~~~Lkei~~k---~~~~~vgvvMTaE 64 (330) T COG1548 1 MKMKILGIDIGGANTKIASSD-GDNYKIDHIYLPMWKKKDRLEETLKEIVHK---DNVDYVGVVMTAE 64 (330) T ss_pred CCCEEEEEECCCCCCHHHHCC-CCEEEEEEEEECCCCCHHHHHHHHHHHHCC---CCCCEEEEEEEHH T ss_conf 973377752167543013205-870146678720001155789999998503---7855068886387 |
|
>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein | Back alignment and domain information |
---|
Probab=95.50 E-value=0.054 Score=30.41 Aligned_cols=58 Identities=19% Similarity=0.233 Sum_probs=38.1 Q ss_pred EEEEECCCCEEEEEEECCCCEEEEEEEECCC---CCCCHHHHHHHHHHHCCCCCCCEEEEEEEE Q ss_conf 9998575118999987799808899974388---735889999999972234565546999730 Q gi|254780280|r 16 LLADIGGTNVRFAILRSMESEPEFCCTVQTS---DYENLEHAIQEVIYRKISIRLRSAFLAIAT 76 (348) Q Consensus 16 L~iDIGGT~ir~glv~~~~~~i~~~~~~~t~---~~~~~~~~i~~~l~~~~~~~~~~igi~v~G 76 (348) T Consensus 1 iG~DIGGAnlK~a~~~~-~g~i~~~~~~~~plWk~~~~L~~~l~~i~~~~~~--~~~~avTMTg 61 (318) T TIGR03123 1 LGIDIGGANTKAAELDE-DGRIKEVHQLYCPLWKGNDKLAETLKEISQDLSS--ADNVAVTMTG 61 (318) T ss_pred CCEEECCCEEEEEEECC-CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC--CCEEEEEEEH T ss_conf 91552550147888538-9868899985170217836789999999985583--1318999206 |
This protein family was identified, by the method of partial phylogenetic profiling, as related to the use of tetrahydromethanopterin (H4MPT) as a C-1 carrier. Characteristic markers of the H4MPT-linked C1 transfer pathway include formylmethanofuran dehydrogenase subunits, methenyltetrahydromethanopterin cyclohydrolase, etc. Tetrahydromethanopterin, a tetrahydrofolate analog, occurs in methanogenic archaea, bacterial methanotrophs, planctomycetes, and a few other lineages. |
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit | Back alignment and domain information |
---|
Probab=93.70 E-value=0.44 Score=24.80 Aligned_cols=49 Identities=12% Similarity=0.121 Sum_probs=35.0 Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCC--CCCHHHHHHHHHHHCC Q ss_conf 73799985751189999877998088999743887--3588999999997223 Q gi|254780280|r 13 FPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSD--YENLEHAIQEVIYRKI 63 (348) Q Consensus 13 ~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~--~~~~~~~i~~~l~~~~ 63 (348) T Consensus 32 mit~GIDiGSTttK~Vll~d--~~ii~~~~~~tg~~~~~aa~~~l~~~l~~~g 82 (293) T TIGR03192 32 IITCGIDVGSVSSQAVLVCD--GELYGYNSMRTGNNSPDSAKNALQGIMDKIG 82 (293) T ss_pred EEEEEEECCCHHEEEEEEEC--CCEEEEEEEECCCCHHHHHHHHHHHHHHHCC T ss_conf 79997871802668999948--9299999860699828999999999999859 |
Members of this family are the Q subunit of one of two related types of four-subunit ATP-dependent benzoyl-CoA reductase. This enzyme system catalyzes the dearomatization of benzoyl-CoA, a common intermediate in pathways for the degradation for a number of different aromatic compounds, such as phenol and toluene. |
>PRK09472 ftsA cell division protein FtsA; Reviewed | Back alignment and domain information |
---|
Probab=93.27 E-value=0.52 Score=24.36 Aligned_cols=63 Identities=16% Similarity=0.182 Sum_probs=42.6 Q ss_pred EEEEEECCCCEEEEEEEC-CCC--EEEEEEEECCCCC--------CCHHHHHHHHHHH---CCCCCCCEEEEEEEEE Q ss_conf 799985751189999877-998--0889997438873--------5889999999972---2345655469997304 Q gi|254780280|r 15 VLLADIGGTNVRFAILRS-MES--EPEFCCTVQTSDY--------ENLEHAIQEVIYR---KISIRLRSAFLAIATP 77 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~-~~~--~i~~~~~~~t~~~--------~~~~~~i~~~l~~---~~~~~~~~igi~v~Gp 77 (348) T Consensus 10 iv~lDIGsskI~~lv~~~~~~g~i~IiG~g~~~S~Gi~kG~I~di~~~~~sI~~av~~aE~~ag~~I~~v~v~isg~ 86 (420) T PRK09472 10 VVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSRGMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGK 86 (420) T ss_pred EEEEECCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC T ss_conf 99998677859999999858997899999984258731878975999999999999999997199333699998577 |
|
>smart00842 FtsA Cell division protein FtsA | Back alignment and domain information |
---|
Probab=93.26 E-value=0.52 Score=24.35 Aligned_cols=64 Identities=16% Similarity=0.240 Sum_probs=42.7 Q ss_pred EEEEEECCCCEEEEEEEC-CCC--EEEEEEEECCCC--------CCCHHHHHHHHHHH---CCCCCCCEEEEEEEEEE Q ss_conf 799985751189999877-998--088999743887--------35889999999972---23456554699973044 Q gi|254780280|r 15 VLLADIGGTNVRFAILRS-MES--EPEFCCTVQTSD--------YENLEHAIQEVIYR---KISIRLRSAFLAIATPI 78 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~-~~~--~i~~~~~~~t~~--------~~~~~~~i~~~l~~---~~~~~~~~igi~v~Gpv 78 (348) T Consensus 1 i~alDIGsski~~~v~~~~~~~~l~Ilg~~~~~s~Gi~~G~I~d~~~~~~~I~~ai~~aE~~ag~~I~~V~v~isg~~ 78 (187) T smart00842 1 IVGLDIGTSKIKALVAEVDEDGEINVIGVGEVPSRGIRKGVIVDIEAAARAIREAVEEAERMAGVKIDSVYVGISGRH 78 (187) T ss_pred CEEEECCCCEEEEEEEEECCCCCEEEEEEEEEECCCEECCEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC T ss_conf 989984788899999999789989999999870476078999828999999999999998743874257999966885 |
FtsA is essential for bacterial cell division, and co-localizes to the septal ring with FtsZ. It has been suggested that the interaction of FtsA-FtsZ has arisen through coevolution in different bacterial strains PUBMED:9352931. |
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
---|
Probab=97.29 E-value=0.012 Score=34.49 Aligned_cols=207 Identities=14% Similarity=0.111 Sum_probs=98.6 Q ss_pred HHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEECCCCCCCC Q ss_conf 99998289855882126543200001586553530243455766675279931762022454310588630113567866 Q gi|254780280|r 97 ELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHM 176 (348) Q Consensus 97 ~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~agE~Gh~ 176 (348) T Consensus 141 ~A~~iaGl~vlrlinEPtAAAlayg~~---------------~~~~~~vlV~DlGGGTfDvSll~~~~g~~ev~at~gd~ 205 (579) T COG0443 141 DAARIAGLNVLRLINEPTAAALAYGLD---------------KGKEKTVLVYDLGGGTFDVSLLEIGDGVFEVLATGGDN 205 (579) T ss_pred HHHHHCCCCEEEECCHHHHHHHHHHHC---------------CCCCCEEEEEECCCCCEEEEEEEECCCEEEEEECCCCC T ss_conf 999866997245216059999997733---------------48885799998689886789999848689986527887 Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCC----CCCCCC-------C---HHHHHHHCCCH Q ss_conf 667661023478999985318986487752222389999999874088----864369-------8---88998836895 Q gi|254780280|r 177 DIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGF----ESNKVL-------S---SKDIVSKSEDP 242 (348) Q Consensus 177 ~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~----~~~~~~-------~---~~~~~~~~~D~ 242 (348) T Consensus 206 ~LGGd-dfD~~l~~~~~~~f~~~~~~d~~~~~~~~~rL-~~~ae~aK~~LS~~~~~~i~~~~~~~~~~~~~~ltR~~~E~ 283 (579) T COG0443 206 HLGGD-DFDNALIDYLVMEFKGKGGIDLRSDKAALQRL-REAAEKAKIELSSATQTSINLPSIGGDIDLLKELTRAKFEE 283 (579) T ss_pred CCCHH-HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH-HHHHHHHHHHHCCCCCCEECHHHCCCCHHHHHHHHHHHHHH T ss_conf 54815-48999999999885024886612037799999-99999999971456220210212146405666725999987 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHH Q ss_conf 79999999999999999999997489973899656776556772764899998837983788973887999578722775 Q gi|254780280|r 243 IALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAG 322 (348) Q Consensus 243 ~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~G 322 (348) T Consensus 284 l~~dll~r~~~~~~~al~~a~l~~~~I~~VilvGGstri--P~V~~--~v~~~f~---------~~~~~~inpdeava~G 350 (579) T COG0443 284 LILDLLERTIEPVEQALKDAGLEKSDIDLVILVGGSTRI--PAVQE--LVKEFFG---------KEPEKSINPDEAVALG 350 (579) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCEECC--HHHHH--HHHHHHC---------CCCCCCCCCCHHHHHH T ss_conf 778999999999999999749985327669983577556--66999--9999828---------7743577974789999 Q ss_pred HHHHHHCCCCC Q ss_conf 99987380012 Q gi|254780280|r 323 MVSYIKMTDCF 333 (348) Q Consensus 323 Aa~~~r~~~~~ 333 (348) T Consensus 351 Aa~qa~~l~~~ 361 (579) T COG0443 351 AAIQAAVLSGE 361 (579) T ss_pred HHHHHHHHCCC T ss_conf 99998762487 |
|
>CHL00094 dnaK heat shock protein 70 | Back alignment and domain information |
---|
Probab=97.25 E-value=0.013 Score=34.18 Aligned_cols=202 Identities=14% Similarity=0.093 Sum_probs=84.6 Q ss_pred HHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEECCCCCCCCCCC Q ss_conf 98289855882126543200001586553530243455766675279931762022454310588630113567866667 Q gi|254780280|r 100 SRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIG 179 (348) Q Consensus 100 ~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~agE~Gh~~~~ 179 (348) T Consensus 159 ~iAGl~vlrlInEPTAAAlaYg~~---------------~~~~~~vlVyDlGGGTfDvSil~~~~g~~eVlat~GD~~LG 223 (622) T CHL00094 159 KIAGLEVLRIINEPTAASLAYGLD---------------KKNNETILVFDLGGGTFDVSILEVGDGVFEVLSTSGDTHLG 223 (622) T ss_pred HHCCCCEEEEECCHHHHHHHHHCC---------------CCCCCEEEEEECCCCEEEEEEEEEECCEEEEEEECCCCCCC T ss_conf 871974255416168999996044---------------57897699998898648877788618839999941798757 Q ss_pred CCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHH---HHHHCCCCCCCCCCHHH--------------HHHHCCCH Q ss_conf 66102347899998531898648775222238999999---98740888643698889--------------98836895 Q gi|254780280|r 180 PSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKA---LCIADGFESNKVLSSKD--------------IVSKSEDP 242 (348) Q Consensus 180 ~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~---l~~~~~~~~~~~~~~~~--------------~~~~~~D~ 242 (348) T Consensus 224 G-~DfD~~i~~~l~~~f~~k~~id~~~d~~a~~rL~~aaEkaK~~LS~~~~~~i~l~~i~~~~dg~~~~~~~itR~~FE~ 302 (622) T CHL00094 224 G-DDFDKKIVDWLIDEFKKKEGIDLKKDRQALQRLTEAAEKAKIELSNVTQTEINLPFITATPTGPKHLEKTLTRAKFEE 302 (622) T ss_pred H-HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECHHHHHH T ss_conf 7-899999999999998664213434479999999999999999758876504773133257788704578973999998 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHH Q ss_conf 79999999999999999999997489973899656776556772764899998837983788973887999578722775 Q gi|254780280|r 243 IALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAG 322 (348) Q Consensus 243 ~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~G 322 (348) T Consensus 303 l~~~l~~r~~~~v~~~L~~a~l~~~dId~ViLVGGstRi--P~V~~--~l~~~fgk~---------~~~~inpDeaVA~G 369 (622) T CHL00094 303 LCSDLIDRCRIPVENALKDAKLDKSDIDEVVLVGGSTRI--PAIQE--LVKSLLGKD---------PNQSVNPDEVVAIG 369 (622) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEEECCCCCC--HHHHH--HHHHHHCCC---------CCCCCCHHHHHHHH T ss_conf 999999999999999999819998894399993881256--78999--999985899---------67796815899998 Q ss_pred HHHHHHCC Q ss_conf 99987380 Q gi|254780280|r 323 MVSYIKMT 330 (348) Q Consensus 323 Aa~~~r~~ 330 (348) T Consensus 370 AAiqa~~l 377 (622) T CHL00094 370 AAIQAGVL 377 (622) T ss_pred HHHHHHHH T ss_conf 99986765 |
|
>pfam00012 HSP70 Hsp70 protein | Back alignment and domain information |
---|
Probab=97.14 E-value=0.017 Score=33.47 Aligned_cols=202 Identities=15% Similarity=0.134 Sum_probs=83.2 Q ss_pred HHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEECCCCCCCCCCC Q ss_conf 98289855882126543200001586553530243455766675279931762022454310588630113567866667 Q gi|254780280|r 100 SRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIG 179 (348) Q Consensus 100 ~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~agE~Gh~~~~ 179 (348) T Consensus 157 ~~AGl~vl~linEptAAAlaYg~~~--------------~~~~~~vlV~DlGggt~dvSv~~~~~g~~~Vla~~gd~~LG 222 (598) T pfam00012 157 RIAGLNVLRIINEPTAAALAYGLDK--------------KDKERNVLVFDLGGGTFDVSILEIGDGVFEVLATNGDTHLG 222 (598) T ss_pred HHCCCCEEEEECCHHHHHHHHHCCC--------------CCCCEEEEEEECCCCCEEEEEEEEECCEEEEEEECCCCCCC T ss_conf 9769964665365889999971435--------------78960899998899817777776129989999832788758 Q ss_pred CCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHH---HHHHHCCCCC-CCC-----C--CHHH----HHHHCCCHHH Q ss_conf 6610234789999853189864877522223899999---9987408886-436-----9--8889----9883689579 Q gi|254780280|r 180 PSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYK---ALCIADGFES-NKV-----L--SSKD----IVSKSEDPIA 244 (348) Q Consensus 180 ~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~---~l~~~~~~~~-~~~-----~--~~~~----~~~~~~D~~A 244 (348) T Consensus 223 G-~dfD~~l~~~l~~~f~~k~~~d~~~~~~a~~~L~~~aekaK~~LS~~~t~~~~~~~~~~~~~~d~~~~itR~eFE~l~ 301 (598) T pfam00012 223 G-EDFDNRLVDHFVEEFKKKYGIDLSKDPRALQRLREAAEKAKIELSSNQTEINLPFITAMADGKDVSGTLTRAKFEELC 301 (598) T ss_pred H-HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEHHHHHHHH T ss_conf 6-788899999999987464167733299999999999999999726666336678887147894799997799999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHHHH Q ss_conf 99999999999999999999748997389965677655677276489999883798378897388799957872277599 Q gi|254780280|r 245 LKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAGMV 324 (348) Q Consensus 245 ~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~GAa 324 (348) T Consensus 302 ~~l~~r~~~~i~~~L~~a~l~~~dId~ViLvGGssRi--P~Vq~-~l~~~f-g~~---------~~~~inpdeaVa~GAA 368 (598) T pfam00012 302 ADLFERTLEPVEKALKDAKLSKSEIDEVVLVGGSTRI--PAVQE-LVKEFF-GKE---------PSKTVNPDEAVAIGAA 368 (598) T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCC--HHHHH-HHHHHH-CCC---------CCCCCCCCHHHHHHHH T ss_conf 9999999999987898728995451257861886567--68999-999986-899---------6668685314233089 Q ss_pred HHHHC Q ss_conf 98738 Q gi|254780280|r 325 SYIKM 329 (348) Q Consensus 325 ~~~r~ 329 (348) T Consensus 369 ~~aa~ 373 (598) T pfam00012 369 VQAGV 373 (598) T ss_pred HHHHH T ss_conf 99987 |
Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region. |
>PTZ00186 heat shock 70 kDa precursor protein; Provisional | Back alignment and domain information |
---|
Probab=97.07 E-value=0.02 Score=33.05 Aligned_cols=200 Identities=14% Similarity=0.065 Sum_probs=84.9 Q ss_pred HHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEECCCCCCCCCCC Q ss_conf 98289855882126543200001586553530243455766675279931762022454310588630113567866667 Q gi|254780280|r 100 SRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIG 179 (348) Q Consensus 100 ~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~agE~Gh~~~~ 179 (348) T Consensus 184 ~iAGL~VlrlInEPTAAALAYGl~---------------~~~~~~vlVyDLGGGTfDVSIl~~~~g~feVlat~GD~~LG 248 (657) T PTZ00186 184 TIAGLNVIRVVNEPTAAALAYGMD---------------KTKDSLIAVYDLGGGTFDISVLEIAGGVFEVKATNGDTHLG 248 (657) T ss_pred HHCCCCEEEEECHHHHHHHHHCCC---------------CCCCCEEEEEECCCCEEEEEEEEEECCEEEEEECCCCCCCC T ss_conf 984994110005577999982566---------------67884799998799617889999978868998446887767 Q ss_pred CCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCC----CCCHHH--------------HHHHCCC Q ss_conf 6610234789999853189864877522223899999998740888643----698889--------------9883689 Q gi|254780280|r 180 PSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNK----VLSSKD--------------IVSKSED 241 (348) Q Consensus 180 ~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~----~~~~~~--------------~~~~~~D 241 (348) T Consensus 249 G-~DfD~~i~~~~~~~f~~~~~id~~~~~~al~rL~~a-aEkaK~~LS~~~~~~i~l~~i~~~~dg~~~~~~~iTR~eFE 326 (657) T PTZ00186 249 G-EDFDLALSDYILEEFRKTSGIDLSKERMALQRVREA-AEKAKCELSSAMETEVNLPFITANADGAQHIQMHISRSKFE 326 (657) T ss_pred H-HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH-HHHHHHHCCCCCCCCCCCCCEECCCCCCCEEEEEEEHHHHH T ss_conf 6-899999999999999886399853069999999999-99999970766222456540014789872469997599998 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHH Q ss_conf 57999999999999999999999748997389965677655677276489999883798378897388799957872277 Q gi|254780280|r 242 PIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIA 321 (348) Q Consensus 242 ~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~ 321 (348) T Consensus 327 ~L~~~Ll~rt~~~v~~aL~dAgl~~~dId~VILVGGSTRI--P~Vq~--~l~~~Fgkep---------~~~iNPDEaVA~ 393 (657) T PTZ00186 327 GITQRLIERSIAPCKQCMKDAGVELKEINDVVLVGGMTRM--PKVVE--EVKKFFQKDP---------FRGVNPDEAVAL 393 (657) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCC--HHHHH--HHHHHHCCCC---------CCCCCCHHHHHH T ss_conf 6889999999999999999818998780089995784154--79999--9999858997---------779791189999 Q ss_pred HHHHHHHC Q ss_conf 59998738 Q gi|254780280|r 322 GMVSYIKM 329 (348) Q Consensus 322 GAa~~~r~ 329 (348) T Consensus 394 GAAiqa~i 401 (657) T PTZ00186 394 GAATLGGV 401 (657) T ss_pred HHHHHHHH T ss_conf 89998887 |
|
>PRK13411 molecular chaperone DnaK; Provisional | Back alignment and domain information |
---|
Probab=96.89 E-value=0.029 Score=32.11 Aligned_cols=201 Identities=15% Similarity=0.099 Sum_probs=84.2 Q ss_pred HHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEECCCCCCCCCCCC Q ss_conf 82898558821265432000015865535302434557666752799317620224543105886301135678666676 Q gi|254780280|r 101 RMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGP 180 (348) Q Consensus 101 ~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~agE~Gh~~~~~ 180 (348) T Consensus 158 iAGL~VlRLINEPTAAALAYGldk--------------~~~~~~vlVyDLGGGTfDVSIl~i~~GvfeVlaT~GD~~LGG 223 (655) T PRK13411 158 IAGLEVLRIINEPTAAALAYGLDK--------------QDQEQRILVFDLGGGTFDVSILQLGDGVFEVKATAGNNHLGG 223 (655) T ss_pred HCCCCEEEEECCHHHHHHHHHCCC--------------CCCCCEEEEEECCCCEEEEEEEEECCCEEEEEEEECCCCCCH T ss_conf 759960444354779999961646--------------788737999977996376678872198899999506887584 Q ss_pred CCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHH---HHHHCCCCCCCCCCHH--------------HHHHHCCCHH Q ss_conf 6102347899998531898648775222238999999---9874088864369888--------------9988368957 Q gi|254780280|r 181 STQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKA---LCIADGFESNKVLSSK--------------DIVSKSEDPI 243 (348) Q Consensus 181 ~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~---l~~~~~~~~~~~~~~~--------------~~~~~~~D~~ 243 (348) T Consensus 224 -~DfD~~Lv~~l~~~f~~~~~iDl~~d~~al~rLr~aaEkAK~~LS~~~~t~i~l~~i~~d~~g~~~l~~~lTR~~FE~L 302 (655) T PRK13411 224 -DDFDNCIVDWLVENFQQQEGIDLSQDKMALQRLREAAEKAKIELSSMLTTSINLPFITADETGPKHLEMELTRAKFEEL 302 (655) T ss_pred -HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEEHHHHHHH T ss_conf -8889999999999997741577432999999999999999998376660689731222567887368999709999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHH-HCCCHHHHHHHCCEEEEECCCCHHHH Q ss_conf 99999999999999999999974899738996567765567727648999988-37983788973887999578722775 Q gi|254780280|r 244 ALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFE-NKSPHKELMRQIPTYVITNPYIAIAG 322 (348) Q Consensus 244 A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~-~~~~~~~~l~~ipv~~~~~~~agl~G 322 (348) T Consensus 303 ~~~L~~rt~~pv~~aL~dA~l~~~dId~ViLVGGSTRI--P~Vq~--~v~~~F~gk~---------~~~~iNPDEaVA~G 369 (655) T PRK13411 303 AKDLVEATIEPVQQALKDAGLTPEDIDRIILVGGSTRI--PAVQE--AIQQFFGGKQ---------PDRSVNPDEAVALG 369 (655) T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCC--HHHHH--HHHHHHCCCC---------CCCCCCCHHHHHHH T ss_conf 99999999988999999809983117899998881465--79999--9999828998---------88897821689886 Q ss_pred HHHHHHC Q ss_conf 9998738 Q gi|254780280|r 323 MVSYIKM 329 (348) Q Consensus 323 Aa~~~r~ 329 (348) T Consensus 370 AAiqa~i 376 (655) T PRK13411 370 AAIQAGV 376 (655) T ss_pred HHHHHHH T ss_conf 9998887 |
|
>PRK13410 molecular chaperone DnaK; Provisional | Back alignment and domain information |
---|
Probab=96.86 E-value=0.031 Score=31.94 Aligned_cols=200 Identities=15% Similarity=0.130 Sum_probs=85.4 Q ss_pred HHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEECCCCCCCCCCCC Q ss_conf 82898558821265432000015865535302434557666752799317620224543105886301135678666676 Q gi|254780280|r 101 RMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGP 180 (348) Q Consensus 101 ~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~agE~Gh~~~~~ 180 (348) T Consensus 160 iAGL~VlRLINEPTAAALAYGl-d--------------k~~~~~VLVyDLGGGTfDVSIL~i~~GvfeVlAT~GDt~LGG 224 (719) T PRK13410 160 IAGLEVLRILNEPTAASLAYGL-D--------------RQDNQTILVFDLGGGTFDVSILEVGDGVFEVKATSGDTQLGG 224 (719) T ss_pred HCCCCEEEEECCHHHHHHHHCC-C--------------CCCCCEEEEEECCCCCEEEEEEEEECCEEEEEEECCCCCCCH T ss_conf 8599636642608899998454-3--------------478857999977987278889996098489976058887487 Q ss_pred CCHHHHHHHHHHHHHCC-CCCCHHHHHCCHHHHHHHHH---HHHHCCCCCCCCCCHHH--------------HHHHCCCH Q ss_conf 61023478999985318-98648775222238999999---98740888643698889--------------98836895 Q gi|254780280|r 181 STQRDYEIFPHLTERAE-GRLSAENLLSGKGLVNIYKA---LCIADGFESNKVLSSKD--------------IVSKSEDP 242 (348) Q Consensus 181 ~~~~~~~~~~~l~~~~g-~~~~~E~~~SG~gl~~~y~~---l~~~~~~~~~~~~~~~~--------------~~~~~~D~ 242 (348) T Consensus 225 ~-DFD~~Iv~~l~~ef~~k~g-iDl~~d~~al~RL~~aAEkAK~~LS~~~~t~I~lp~i~~~~dg~~~l~~~ITR~eFE~ 302 (719) T PRK13410 225 N-DFDKRIVDWLAEQFLEAEG-IDLRRDRQALQRLTEAAEKAKIELSGVSVTDINLPFITATEDGPKHLETRLTRSQFED 302 (719) T ss_pred H-HHHHHHHHHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEEHHHHHH T ss_conf 7-8879999999999998637-6643399999999999999999707576525884233256778712699975999998 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHH Q ss_conf 79999999999999999999997489973899656776556772764899998837983788973887999578722775 Q gi|254780280|r 243 IALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAG 322 (348) Q Consensus 243 ~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~G 322 (348) T Consensus 303 L~~~L~~Rt~~pv~~aL~dAgl~~~dId~VILVGGSTRI--P~Vq~--~V~e~FGkep~----~~-----iNPDEaVA~G 369 (719) T PRK13410 303 LCGDLVSRLRRPVKRALKDAGLSPVQIDEVVLVGGSTRM--PMVKQ--LVRSLIDREPN----QN-----VNPDEVVAVG 369 (719) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCC--HHHHH--HHHHHHCCCCC----CC-----CCCCHHHHHH T ss_conf 899999999999999999838994141399997882554--88999--99998499978----88-----9971775031 Q ss_pred HHHHHHCC Q ss_conf 99987380 Q gi|254780280|r 323 MVSYIKMT 330 (348) Q Consensus 323 Aa~~~r~~ 330 (348) T Consensus 370 AAiQA~iL 377 (719) T PRK13410 370 AAIQAGIL 377 (719) T ss_pred HHHHHHHH T ss_conf 88864310 |
|
>PRK05183 hscA chaperone protein HscA; Provisional | Back alignment and domain information |
---|
Probab=95.79 E-value=0.12 Score=28.19 Aligned_cols=200 Identities=16% Similarity=0.073 Sum_probs=84.8 Q ss_pred HHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEECCCCCCCCCCC Q ss_conf 98289855882126543200001586553530243455766675279931762022454310588630113567866667 Q gi|254780280|r 100 SRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIG 179 (348) Q Consensus 100 ~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~agE~Gh~~~~ 179 (348) T Consensus 174 ~iAGL~VlRlINEPTAAAlAYGld---------------~~~e~~vlVyDLGGGTfDVSIl~~~~gvfeVlAt~GD~~LG 238 (621) T PRK05183 174 RLAGLNVLRLLNEPTAAAIAYGLD---------------SGQEGVIAVYDLGGGTFDISILRLSKGVFEVLATGGDSALG 238 (621) T ss_pred HHCCCCEEEEECHHHHHHHHHCCC---------------CCCCCEEEEEECCCCEEEEEEEEEECCEEEEEEECCCCCCC T ss_conf 974984587416289999980266---------------68875799998788658999999748878999705988758 Q ss_pred CCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC----HHH----HHHHCCCHHHHHHHHHH Q ss_conf 6610234789999853189864877522223899999998740888643698----889----98836895799999999 Q gi|254780280|r 180 PSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLS----SKD----IVSKSEDPIALKAINLF 251 (348) Q Consensus 180 ~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~----~~~----~~~~~~D~~A~~~~~~~ 251 (348) T Consensus 239 G-~DfD~~i~~~l~~~~~~~~~-~d~~~~~~L~~~aE~aK~~LS~~~~~~i~~~~~~~~~~~~ltR~~FE~l~~~L~~rt 316 (621) T PRK05183 239 G-DDFDHLLADWLLEQAGLAPR-LDPEDQRLLLDAARAAKEALSDADSVEVSVALWQGELKLTITREQFEALIAPLVKRT 316 (621) T ss_pred C-HHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHH T ss_conf 0-88999999999987433657-999999999999999999636786389996058953799974999999999999999 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHC Q ss_conf 999999999999974899738996567765567727648999988379837889738879995787227759998738 Q gi|254780280|r 252 CEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAGMVSYIKM 329 (348) Q Consensus 252 ~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~GAa~~~r~ 329 (348) T Consensus 317 ~~~v~~aL~dA~l~~~dId~ViLVGGSTRi--P~Vq~--~v~~~Fgk~---------~~~~inPDeaVA~GAAiQa~i 381 (621) T PRK05183 317 LLACRRALRDAGVEADEVLEVVMVGGSTRV--PLVRE--AVGEFFGRT---------PLTSIDPDKVVALGAAIQADI 381 (621) T ss_pred HHHHHHHHHHHCCCHHHCEEEEEECCCCCC--HHHHH--HHHHHHCCC---------CCCCCCCHHHHHHHHHHHHHH T ss_conf 999999998713683002099992885456--68999--999985989---------666899016888769999998 |
|
>PRK01433 hscA chaperone protein HscA; Provisional | Back alignment and domain information |
---|
Probab=95.66 E-value=0.14 Score=27.88 Aligned_cols=190 Identities=16% Similarity=0.116 Sum_probs=79.2 Q ss_pred HHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEECCCCCCCCCCC Q ss_conf 98289855882126543200001586553530243455766675279931762022454310588630113567866667 Q gi|254780280|r 100 SRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIG 179 (348) Q Consensus 100 ~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~agE~Gh~~~~ 179 (348) T Consensus 165 ~iAGL~VlRlInEPTAAAlAYGl~---------------k~~~~~ilVyDLGGGTfDVSil~~~~g~feVlat~GD~~LG 229 (595) T PRK01433 165 KIAGFEVLRLIAEPTAAAYAYGLN---------------KNQKGCYLVYDLGGGTFDVSILNIQEGIFQVIATNGDNMLG 229 (595) T ss_pred HHCCCCEEEECCHHHHHHHHHCCC---------------CCCCCEEEEEECCCCEEEEEEEEEECCEEEEEEECCCCCCC T ss_conf 984991587336889999981876---------------68886599998889718999999518808999703788767 Q ss_pred CCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHH-HHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 6610234789999853189864877522223899999-998740888643698889988368957999999999999999 Q gi|254780280|r 180 PSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYK-ALCIADGFESNKVLSSKDIVSKSEDPIALKAINLFCEYLGRV 258 (348) Q Consensus 180 ~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~-~l~~~~~~~~~~~~~~~~~~~~~~D~~A~~~~~~~~~~lg~~ 258 (348) T Consensus 230 G~-DfD~~i~~~l~~~f~~~~~~~~~---~-~ae~aK~~Ls~~~~~~~----~~~~ltR~~Fe~l~~~L~~r~~~~v~~~ 300 (595) T PRK01433 230 GN-DIDVVITQYLCNKFDLPNSIDTL---Q-LAKKAKETLTYKDSFNN----DNISINKQTLEQLILPLVERTINIAQEC 300 (595) T ss_pred HH-HHHHHHHHHHHHHHCCCCCHHHH---H-HHHHHHHHHCCCCCCCC----CCEEEEHHHHHHHHHHHHHHHHHHHHHH T ss_conf 55-68999999999872877778899---9-99999998233543457----7418769999999999999999999999 Q ss_pred HHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHHHHHHHH Q ss_conf 9999997489973899656776556772764899998837983788973887999578722775999873 Q gi|254780280|r 259 AGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAGMVSYIK 328 (348) Q Consensus 259 i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~GAa~~~r 328 (348) T Consensus 301 L~~a~-~~dI-d~ViLVGGsTRi--P~Vq~--~l~~~Fg~~~---------~~~inPDEaVA~GAAiqa~ 355 (595) T PRK01433 301 LEQAG-NPNI-DGVILVGGATRI--PLIKD--ELYKAFKVDI---------LSDIDPDKAVVWGAALQAE 355 (595) T ss_pred HHHCC-CCCC-CEEEEECCCCCC--HHHHH--HHHHHHCCCC---------CCCCCHHHHHHHHHHHHHH T ss_conf 99769-3535-548996785545--89999--9999858997---------7897847899998999877 |
|
>PTZ00009 heat shock 70 kDa protein; Provisional | Back alignment and domain information |
---|
Probab=90.99 E-value=0.97 Score=22.67 Aligned_cols=203 Identities=13% Similarity=0.072 Sum_probs=87.2 Q ss_pred HHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEECCCCCCCCCCC Q ss_conf 98289855882126543200001586553530243455766675279931762022454310588630113567866667 Q gi|254780280|r 100 SRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIG 179 (348) Q Consensus 100 ~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~agE~Gh~~~~ 179 (348) T Consensus 164 ~iAGL~vlrlInEPTAAAlaYgl~k-------------~~~~~~~vlV~DlGgGTfDVSvl~~~~g~~~Vlat~gD~~LG 230 (657) T PTZ00009 164 TIAGLNVMRIINEPTAAAIAYGLDK-------------KGDGERNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLG 230 (657) T ss_pred HHCCCCEEEEECCHHHHHHHHCCCC-------------CCCCCCEEEEEECCCCEEEEEEEEEECCEEEEEECCCCCCCC T ss_conf 9749955788642789999850234-------------678861899998788649977689868838998504778868 Q ss_pred CCCHHHHHHHHHHHHHCCC-CCCHHHHHCCHHHHHHHHH---HHHHCCCCCCCC--CC----HHH----HHHHCCCHHHH Q ss_conf 6610234789999853189-8648775222238999999---987408886436--98----889----98836895799 Q gi|254780280|r 180 PSTQRDYEIFPHLTERAEG-RLSAENLLSGKGLVNIYKA---LCIADGFESNKV--LS----SKD----IVSKSEDPIAL 245 (348) Q Consensus 180 ~~~~~~~~~~~~l~~~~g~-~~~~E~~~SG~gl~~~y~~---l~~~~~~~~~~~--~~----~~~----~~~~~~D~~A~ 245 (348) T Consensus 231 G-~dfD~~L~~~~~~~fk~k~~g~d~~~~~ra~~rL~~aaEkaK~~LS~~~~a~i~ie~l~~~~d~~~~itR~~FE~l~~ 309 (657) T PTZ00009 231 G-EDFDNRLVEFCVEDFKRKNKGKDLSSNHRALRRLRTACERAKRTLSSSTQATIEIDSLFEGIDYQATISRARFEELCG 309 (657) T ss_pred H-HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHH T ss_conf 0-677999999999999875168786649999999999999999971458743788214323446335671999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHH-HCCCHHHHHHHCCEEEEECCCCHHHHHH Q ss_conf 999999999999999999974899738996567765567727648999988-3798378897388799957872277599 Q gi|254780280|r 246 KAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFE-NKSPHKELMRQIPTYVITNPYIAIAGMV 324 (348) Q Consensus 246 ~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~-~~~~~~~~l~~ipv~~~~~~~agl~GAa 324 (348) T Consensus 310 ~l~~r~~~~i~~aL~~a~l~~~dId~ViLVGGsTRi--P~Vq~--~l~~~f~gk~~---------~~~iNpDEaVA~GAA 376 (657) T PTZ00009 310 DLFRSTLQPVEKVLQDAKMDKRSVHDVVLVGGSTRI--PKVQS--LISDFFNGKEL---------NKSINPDEAVAYGAA 376 (657) T ss_pred HHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCC--HHHHH--HHHHHHCCCCC---------CCCCCCHHHHHHHHH T ss_conf 999989999999999737995251499980881467--68999--99998189888---------889783146665489 Q ss_pred HHHHC Q ss_conf 98738 Q gi|254780280|r 325 SYIKM 329 (348) Q Consensus 325 ~~~r~ 329 (348) T Consensus 377 iqaa~ 381 (657) T PTZ00009 377 VQAAI 381 (657) T ss_pred HHHHH T ss_conf 99998 |
|
>pfam00370 FGGY_N FGGY family of carbohydrate kinases, N-terminal domain | Back alignment and domain information |
---|
Probab=96.91 E-value=0.0052 Score=36.69 Aligned_cols=27 Identities=19% Similarity=0.191 Sum_probs=20.9 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEE Q ss_conf 7999857511899998779980889997 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCT 42 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~ 42 (348) T Consensus 2 ~lgIDiGTt~iKa~l~d~~g-~~i~~~~ 28 (245) T pfam00370 2 VLGIDCGTTSTKAIVFNKQG-KVVASAS 28 (245) T ss_pred EEEEEHHHCCEEEEEECCCC-CEEEEEE T ss_conf 99998030021000785999-9999999 |
This domain adopts a ribonuclease H-like fold and is structurally related to the C-terminal domain. |
>COG0145 HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
---|
Probab=95.27 E-value=0.15 Score=27.76 Aligned_cols=32 Identities=19% Similarity=0.091 Sum_probs=20.4 Q ss_pred CEEEEEECCCCEEEEEEECCCCEEEEEEEECC Q ss_conf 37999857511899998779980889997438 Q gi|254780280|r 14 PVLLADIGGTNVRFAILRSMESEPEFCCTVQT 45 (348) Q Consensus 14 ~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t 45 (348) T Consensus 3 ~~iGID~GGTfTDaV~~~~~~g~~~~~K~lTt 34 (674) T COG0145 3 LRIGIDVGGTFTDAVLLDEDGGVLATIKVLTT 34 (674) T ss_pred EEEEEECCCCCEEEEEEECCCCEEEEEECCCC T ss_conf 69999728770869999589977998771689 |
|
>COG0554 GlpK Glycerol kinase [Energy production and conversion] | Back alignment and domain information |
---|
Probab=90.39 E-value=1.1 Score=22.33 Aligned_cols=30 Identities=17% Similarity=0.086 Sum_probs=21.8 Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEEE Q ss_conf 737999857511899998779980889997 Q gi|254780280|r 13 FPVLLADIGGTNVRFAILRSMESEPEFCCT 42 (348) Q Consensus 13 ~~vL~iDIGGT~ir~glv~~~~~~i~~~~~ 42 (348) T Consensus 5 ~yIlAiDqGTTssRaivfd~~g~iva~~q~ 34 (499) T COG0554 5 KYILAIDQGTTSSRAIVFDEDGNIVAIAQR 34 (499) T ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEEEE T ss_conf 679998158762048998788885423413 |
|
>PRK00109 Holliday junction resolvase-like protein; Reviewed | Back alignment and domain information |
---|
Probab=96.32 E-value=0.024 Score=32.59 Aligned_cols=97 Identities=14% Similarity=0.110 Sum_probs=55.7 Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCC Q ss_conf 66773799985751189999877998088999743887358899999999722345655469997304416855642135 Q gi|254780280|r 10 PIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNY 89 (348) Q Consensus 10 ~~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~ 89 (348) T Consensus 1 ~~~griLgiD~G~kriGlAisD~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e---~~i~~iViGlP~~~-~g~~~~~~~~ 76 (141) T PRK00109 1 MMSGRILGFDVGTKRIGVAIGDPLGGTARPLETIKAQNGEPDWDALEKLLKE---WQPDLLVVGLPLNM-DGTEGPMTER 76 (141) T ss_pred CCCCCEEEEEECCCEEEEEEECCCCCEEECCEEEECCCCHHHHHHHHHHHHH---HCCCEEEEECCCCC-CCCCCHHHHH T ss_conf 9988889998189979999946999847441437727706899999999998---39998999447999-9884488999 Q ss_pred CCCCCHHHHHHHHCCCCEEEECH Q ss_conf 66669889999828985588212 Q gi|254780280|r 90 HWVIDPEELISRMQFEDVLLIND 112 (348) Q Consensus 90 ~~~~~~~~l~~~~~~~~v~i~ND 112 (348) T Consensus 77 v-~~F~~~L~~~~~-l~v~~~DE 97 (141) T PRK00109 77 A-RKFANRLEGRFG-LPVELVDE 97 (141) T ss_pred H-HHHHHHHHHHHC-CCEEEEEC T ss_conf 9-999999999729-98798624 |
|
>smart00732 YqgFc Likely ribonuclease with RNase H fold | Back alignment and domain information |
---|
Probab=96.21 E-value=0.022 Score=32.77 Aligned_cols=91 Identities=13% Similarity=0.097 Sum_probs=54.5 Q ss_pred CEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCCCC Q ss_conf 37999857511899998779980889997438873588999999997223456554699973044168556421356666 Q gi|254780280|r 14 PVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYHWVI 93 (348) Q Consensus 14 ~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~~~~~ 93 (348) T Consensus 2 rvLgiD~G~kriG~Ai~D~~~~~a~pl~~i~~~~~~~~~~~l~~~i~~---~~~~~iviG~P~~~~-g~~~~~~~---~~ 74 (99) T smart00732 2 RVLGLDPGRKGIGVAVVDETGKLADPLEVIPRTNKEADAARLKKLIKK---YQPDLIVIGLPLNMN-GTASRETE---EA 74 (99) T ss_pred CEEEEEECCCCEEEEEEECCCCEECCCEEEECCCCHHHHHHHHHHHHH---HCCCEEEECCCCCCC-CCCCHHHH---HH T ss_conf 799992178969999998999732131899859826999999999998---499889974752489-98199999---99 Q ss_pred CHHHHHHHHCCCCEEEECH Q ss_conf 9889999828985588212 Q gi|254780280|r 94 DPEELISRMQFEDVLLIND 112 (348) Q Consensus 94 ~~~~l~~~~~~~~v~i~ND 112 (348) T Consensus 75 f~~~l~~-~~~i~v~~~DE 92 (99) T smart00732 75 FAELLKE-RFNLPVVLVDE 92 (99) T ss_pred HHHHHHH-CCCCCEEEEEC T ss_conf 9999851-78998899958 |
YqgF proteins are likely to function as an alternative to RuvC in most bacteria, and could be the principal holliday junction resolvases in low-GC Gram-positive bacteria. In Spt6p orthologues, the catalytic residues are substituted indicating that they lack enzymatic functions. |
>pfam03652 UPF0081 Uncharacterized protein family (UPF0081) | Back alignment and domain information |
---|
Probab=96.06 E-value=0.038 Score=31.36 Aligned_cols=94 Identities=15% Similarity=0.077 Sum_probs=55.8 Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCCC Q ss_conf 73799985751189999877998088999743887358899999999722345655469997304416855642135666 Q gi|254780280|r 13 FPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYHWV 92 (348) Q Consensus 13 ~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~~~~ 92 (348) T Consensus 1 ~riLgiD~G~kriGvAisd~~~~~a~Pl~~i~~~~~~~~~~~i~~ii~e~---~i~~iVvGlP~~~-dG~~~~~~~~v-~ 75 (134) T pfam03652 1 GRILGLDVGTKRIGVAISDPLGILASPLETIERKNGKPDLEELAELIKEW---QPDGIVVGLPLNM-DGSEGEQTKRV-R 75 (134) T ss_pred CCEEEEECCCCEEEEEEECCCCCEEECEEEEECCCCHHHHHHHHHHHHHH---CCCEEEEECCCCC-CCCCCHHHHHH-H T ss_conf 97999980899799999359998250248898588558999999999983---9998999558999-98808899999-9 Q ss_pred CCHHHHHHHHCCCCEEEECH Q ss_conf 69889999828985588212 Q gi|254780280|r 93 IDPEELISRMQFEDVLLIND 112 (348) Q Consensus 93 ~~~~~l~~~~~~~~v~i~ND 112 (348) T Consensus 76 ~f~~~L~~~~~-i~v~~~DE 94 (134) T pfam03652 76 KFARRLKKRFG-LPVELVDE 94 (134) T ss_pred HHHHHHHHHHC-CCEEEEEC T ss_conf 99999998619-98688634 |
|
>PRK13928 rod shape-determining protein Mbl; Provisional | Back alignment and domain information |
---|
Probab=92.71 E-value=0.62 Score=23.86 Aligned_cols=99 Identities=15% Similarity=0.121 Sum_probs=48.6 Q ss_pred CCCCEEEEEECCCCEEEEEEECCCCEEEEE-EE--E-----------------------------CC-----CCCCCHHH Q ss_conf 677379998575118999987799808899-97--4-----------------------------38-----87358899 Q gi|254780280|r 11 IAFPVLLADIGGTNVRFAILRSMESEPEFC-CT--V-----------------------------QT-----SDYENLEH 53 (348) Q Consensus 11 ~~~~vL~iDIGGT~ir~glv~~~~~~i~~~-~~--~-----------------------------~t-----~~~~~~~~ 53 (348) T Consensus 1 ~~~~~iGIDLGTtn~~v~~-~-~~~iv~~ePSvVa~~~~~~~~l~vG~~Ak~~~~~~p~~~~~~~pl~~g~i~d~e~~~~ 78 (325) T PRK13928 1 MFGRDIGIDLGTANVLVYV-K-GKGIVLNEPSVVAIDRNTNKVLAVGEEARRMVGRTPGNIVAIRPLRDGVIADYDVTEK 78 (325) T ss_pred CCCCEEEEECCHHCEEEEE-C-CCCEECCCCEEEEEECCCCEEEEEHHHHHHHCCCCCCCEEEEEECCCCEECCHHHHHH T ss_conf 9877448998602589998-7-9987987884999988999799865999985447998789999568976636788899 Q ss_pred HHHHHHHHCC---CCCCCEEEEEEEEEEECCCEEEECCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHH Q ss_conf 9999997223---456554699973044168556421356666988999982898558821265432000 Q gi|254780280|r 54 AIQEVIYRKI---SIRLRSAFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAI 120 (348) Q Consensus 54 ~i~~~l~~~~---~~~~~~igi~v~Gpv~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~i~ND~~a~a~~~ 120 (348) T Consensus 79 ~L~~l~~~~~~~~~~~~~~vVItVPa~f~~~q---------R~At~~Aa~~AGl~~v~li~EPtAAAl~~ 139 (325) T PRK13928 79 MLKYFINKACGKRFFSKPRIMICIPSGITSVE---------KRAVRDAAEQAGAKKVYLIEEPLAAAIGA 139 (325) T ss_pred HHHHHHHHHHCCCCCCCCCEEEEECCCCCHHH---------HHHHHHHHHHCCCCEEEEECCHHHHHHHH T ss_conf 89999999730235799819999797999999---------99999999986998799965569999984 |
|
>PRK13930 rod shape-determining protein MreB; Provisional | Back alignment and domain information |
---|
Probab=92.52 E-value=0.66 Score=23.71 Aligned_cols=100 Identities=17% Similarity=0.157 Sum_probs=49.7 Q ss_pred CCCCCCEEEEEECCCCEEEEEEECCCCEEEE-EE--EE-----------------------------CC-----CCCCCH Q ss_conf 7667737999857511899998779980889-99--74-----------------------------38-----873588 Q gi|254780280|r 9 FPIAFPVLLADIGGTNVRFAILRSMESEPEF-CC--TV-----------------------------QT-----SDYENL 51 (348) Q Consensus 9 ~~~~~~vL~iDIGGT~ir~glv~~~~~~i~~-~~--~~-----------------------------~t-----~~~~~~ 51 (348) T Consensus 5 ~~~~~~~iGIDLGTtns~i~~-~~-~gii~~~PSvVa~~~~~~~i~~vG~~Ak~~~~~~p~~~~~~~pl~~g~i~d~e~~ 82 (336) T PRK13930 5 FGFFSKDIGIDLGTANTLVYV-KG-KGIVLNEPSVVAVDKKTGKVLAVGEEAKAMLGRTPGNIEAIRPLKDGVIADFEAT 82 (336) T ss_pred HHHHCCEEEEECCHHCEEEEE-EC-CCEECCCCEEEEEECCCCEEEEHHHHHHHHCCCCCCCEEEEEECCCCEECCHHHH T ss_conf 545457669998635389999-18-9888988859999879998984389999850489775699996789815488999 Q ss_pred HHHHHHHHHHCC---CCCCCEEEEEEEEEEECCCEEEECCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHH Q ss_conf 999999997223---45655469997304416855642135666698899998289855882126543200 Q gi|254780280|r 52 EHAIQEVIYRKI---SIRLRSAFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALA 119 (348) Q Consensus 52 ~~~i~~~l~~~~---~~~~~~igi~v~Gpv~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~i~ND~~a~a~~ 119 (348) T Consensus 83 ~~~l~~l~~~~~~~~~~~~~~~VItVPa~f~~~q---------R~a~~~Aa~~AGl~~v~li~EPtAAAl~ 144 (336) T PRK13930 83 EAMLRYFIKKARGRSSFGRPRIVICVPSGITEVE---------RRAVREAAEHAGAREVYLIEEPMAAAIG 144 (336) T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHH---------HHHHHHHHHHCCCCEEEEECCHHHHHHH T ss_conf 9999999999986458899819999399999999---------9999999997699879985526999987 |
|
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein; InterPro: IPR013366 Salmonella typhimurium is capable of growth on ethanolamine as a sole source of carbon nitrogen and energy | Back alignment and domain information |
---|
Probab=91.54 E-value=0.86 Score=23.01 Aligned_cols=93 Identities=15% Similarity=0.238 Sum_probs=56.0 Q ss_pred EEEECCCCEEEEEEECCCCEEEEEEEECCC--------CCCCHHHHHH---HHHHHCCCCCCCEEEEEEE-EEEECCCEE Q ss_conf 998575118999987799808899974388--------7358899999---9997223456554699973-044168556 Q gi|254780280|r 17 LADIGGTNVRFAILRSMESEPEFCCTVQTS--------DYENLEHAIQ---EVIYRKISIRLRSAFLAIA-TPIGDQKSF 84 (348) Q Consensus 17 ~iDIGGT~ir~glv~~~~~~i~~~~~~~t~--------~~~~~~~~i~---~~l~~~~~~~~~~igi~v~-Gpv~~~~~~ 84 (348) T Consensus 1 GVDLGTa~IV~vVLD~-d~~PVAg~~~~a~VVRDG~VVDf~~A~~iV~rLK~~lE~klG~~lt~A~~A~PPGt~~~~~k~ 79 (240) T TIGR02529 1 GVDLGTANIVIVVLDE-DGQPVAGVMQFADVVRDGIVVDFLEAVEIVKRLKDKLEKKLGIELTHAATAVPPGTEEGDVKV 79 (240) T ss_pred CCCEEEEEEEEEEEEC-CCCEEEEEECHHHEEECCEEEECHHHHHHHHHHHHHHHHHHCCEEEECCEECCCCCCCCCEEE T ss_conf 9750452089999845-996389985323235534378204478899999988888809456413150089758897589 Q ss_pred EECCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHH Q ss_conf 421356666988999982898558821265432000 Q gi|254780280|r 85 TLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAI 120 (348) Q Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~v~i~ND~~a~a~~~ 120 (348) T Consensus 80 ~vNV----------~EsAG~eV~~V~DEPTAAa~vL 105 (240) T TIGR02529 80 IVNV----------VESAGIEVLKVLDEPTAAAAVL 105 (240) T ss_pred EEEE----------EECCCEEEEEEECCHHHHHHHH T ss_conf 9998----------7225615766514278999872 |
During growth on this compound the cells form a multimolecular structure known as a metabolosome, which is similar to the carboxysome used by some photosynthetic bacteria to fix CO2, and is thought to contain the enzymes needed to metabolise this compound to acetyl-CoA. The metabolosome is not directly involved in the biochemistry of ethanolamine utilization - instead its role is thought to be to concentrate the enzymes involved in this process, while also protecting the cell from the build-up of toxic intermediates . The genes involved in growth on ethanolamine are encoded in a 17-gene operon known as the ethanolamine utilization (eut) operon. EutJ shows similarity to chaperonins and may play a role in assembly of the metabolosme , though it is not necessary for growth on this compound.. |
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B | Back alignment and domain information |
---|
Probab=90.48 E-value=0.9 Score=22.88 Aligned_cols=95 Identities=13% Similarity=0.145 Sum_probs=49.6 Q ss_pred CCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCC-CHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCC Q ss_conf 77379998575118999987799808899974388735-88999999997223456554699973044168556421356 Q gi|254780280|r 12 AFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYE-NLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYH 90 (348) Q Consensus 12 ~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~-~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~~ 90 (348) T Consensus 1 ~~~ilalD~G~KrIGvA~sd~~~~~A~pl~~i~~~~~~~~~~~~l~~li~~~---~~~~vVVGlP~~m~g~~~~-~~~~- 75 (141) T COG0816 1 GMRILALDVGTKRIGVAVSDILGSLASPLETIKRKNGKPQDFNALLKLVKEY---QVDTVVVGLPLNMDGTEGP-RAEL- 75 (141) T ss_pred CCEEEEEECCCCEEEEEEECCCCCCCCCHHHEEECCCCHHHHHHHHHHHHHH---CCCEEEEECCCCCCCCCCH-HHHH- T ss_conf 9649999627874889976477752124143020335375699999999983---8887999667688887134-6999- Q ss_pred CCCCHHHHHHHHCCCCEEEECH Q ss_conf 6669889999828985588212 Q gi|254780280|r 91 WVIDPEELISRMQFEDVLLIND 112 (348) Q Consensus 91 ~~~~~~~l~~~~~~~~v~i~ND 112 (348) T Consensus 76 ~~~f~~~L~~r~~-lpv~l~DE 96 (141) T COG0816 76 ARKFAERLKKRFN-LPVVLWDE 96 (141) T ss_pred HHHHHHHHHHHCC-CCEEEECC T ss_conf 9999999987649-87899818 |
subtilis) [DNA replication, recombination, and repair] |
>PRK13929 rod-share determining protein MreBH; Provisional | Back alignment and domain information |
---|
Probab=90.15 E-value=1.2 Score=22.21 Aligned_cols=97 Identities=12% Similarity=0.116 Sum_probs=48.9 Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEEE---E-----------------------------CC-----CCCCCHHHHH Q ss_conf 737999857511899998779980889997---4-----------------------------38-----8735889999 Q gi|254780280|r 13 FPVLLADIGGTNVRFAILRSMESEPEFCCT---V-----------------------------QT-----SDYENLEHAI 55 (348) Q Consensus 13 ~~vL~iDIGGT~ir~glv~~~~~~i~~~~~---~-----------------------------~t-----~~~~~~~~~i 55 (348) T Consensus 4 ~~~iGIDLGTtns~v~~~~--~gii~~ePSvva~d~~~~~~~avG~~Ak~~~~~~p~~i~~~~p~~~g~i~d~e~s~~iL 81 (335) T PRK13929 4 STEIGIDLGTANILVYSKN--KGIILNEPSVVAVDTETKAVLAIGTEAKNMIGKTPGKIVAVRPMKDGVIADYDMTTDLL 81 (335) T ss_pred CCEEEEECCHHHEEEEECC--CCEECCCCCEEEEECCCCEEEEECHHHHHHHCCCCCCEEEEEECCCCEECCHHHHHHHH T ss_conf 8816898753528999878--99888478689997799729996499999715697768999857896345667679999 Q ss_pred HHHHHHCC---CCCCC--EEEEEEEEEEECCCEEEECCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHH Q ss_conf 99997223---45655--4699973044168556421356666988999982898558821265432000 Q gi|254780280|r 56 QEVIYRKI---SIRLR--SAFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAI 120 (348) Q Consensus 56 ~~~l~~~~---~~~~~--~igi~v~Gpv~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~i~ND~~a~a~~~ 120 (348) T Consensus 82 ~~l~~~a~~~~g~~~~~p~~VItVPa~ft~~q---------R~A~~~Aa~~AG~~~v~li~EPtAAAlg~ 142 (335) T PRK13929 82 KQIMKKAGKNIGMTFRKPTVVVCTPSGSTAVE---------RRAISDAVKNCGAKQVHLIEEPVAAAIGA 142 (335) T ss_pred HHHHHHHHHHCCCCCCCCCEEEEECCCCCHHH---------HHHHHHHHHHCCCEEEEEECCHHHHHHHC T ss_conf 99999999851876688878999299999999---------99999999975980899844068999877 |
|
>COG0282 ackA Acetate kinase [Energy production and conversion] | Back alignment and domain information |
---|
Probab=94.07 E-value=0.38 Score=25.22 Aligned_cols=127 Identities=15% Similarity=0.178 Sum_probs=69.6 Q ss_pred CCCEEEECCCCEEEEEEEECCCCCCEECCCCCCCCCCCC------CCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH Q ss_conf 752799317620224543105886301135678666676------61023478999985318986487752222389999 Q gi|254780280|r 142 FSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGP------STQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIY 215 (348) Q Consensus 142 ~~~~~~ig~GtG~g~~~~~~~~~g~~~~agE~Gh~~~~~------~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y 215 (348) T Consensus 199 ~l~~I~~HLGNGASicAiknGkS----vDTSMGfTPLeGl~MGTRsGdiDP~ii~~l~~~~~--------~s~~~i~~~L 266 (396) T COG0282 199 DLNLITCHLGNGASICAIKNGKS----VDTSMGFTPLEGLMMGTRSGDIDPGIILYLMEQEG--------MSAEEIDTLL 266 (396) T ss_pred CCCEEEEEECCCHHHHHHCCCEE----ECCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCC--------CCHHHHHHHH T ss_conf 34779999358630222307843----20588877145401147777778479999997519--------9999999998 Q ss_pred HHHHHHCCCCC-CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHH Q ss_conf 99987408886-4369888998836895799999999999999999999974899738996567765 Q gi|254780280|r 216 KALCIADGFES-NKVLSSKDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYK 281 (348) Q Consensus 216 ~~l~~~~~~~~-~~~~~~~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~ 281 (348) T Consensus 267 NkkSGllGlSg~ssD~R~l~~~~~~g~~-A~lA~~~f~~Ri~kyIg~y~a~L~glDaiVFTaGIGEN 332 (396) T COG0282 267 NKKSGLLGLSGLSSDMRDLEEAAAEGNE-AKLALDMFVYRIAKYIGSYAAALGGLDALVFTAGIGEN 332 (396) T ss_pred HHHCCCCCCCCCCCCHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC T ss_conf 6623543015666308899987436816-89999999999999999999985799889991764668 |
|
>KOG2517 consensus | Back alignment and domain information |
---|
Probab=92.31 E-value=0.24 Score=26.46 Aligned_cols=50 Identities=8% Similarity=0.145 Sum_probs=31.2 Q ss_pred CCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCC Q ss_conf 7389965677655677276489999883798378897388799957872277599987380012 Q gi|254780280|r 270 GGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAGMVSYIKMTDCF 333 (348) Q Consensus 270 ~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~GAa~~~r~~~~~ 333 (348) T Consensus 416 ~~L~~~GG~s~N-------~ll~Q~------~ADi~-g~pv~~p~~~e~~~~GaA~l~~~a~~~ 465 (516) T KOG2517 416 STLRVCGGLSKN-------PLLMQL------QADIL-GLPVVRPQDVEAVALGAAMLAGAASGK 465 (516) T ss_pred CEEEECCCCCCC-------HHHHHH------HHHHH-CCCCCCCCCHHHHHHHHHHHHHHHCCC T ss_conf 414534642148-------999999------99986-885004653348999999998765277 |
|
Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch
Homologous Structures Detected by PSI-BLAST against Nonredundant Database
Identity | Alignment graph | Length | Definition | E-value |
Target | 348 | glucokinase [Candidatus Liberibacter asiaticus str. psy | ||
1q18_A | 332 | Crystal Structure Of E.Coli Glucokinase (Glk) Lengt | 2e-58 | |
2qm1_A | 326 | Crystal Structure Of Glucokinase From Enterococcus | 3e-27 | |
1xc3_A | 302 | Structure Of A Putative Fructokinase From Bacillus | 2e-11 | |
2gup_A | 292 | Structural Genomics, The Crystal Structure Of A Rok | 9e-11 | |
3htv_A | 310 | Crystal Structure Of D-Allose Kinase (Np_418508.1) | 3e-10 | |
3lm9_A | 302 | Crystal Structure Of Fructokinase With Adp And Fruc | 7e-06 | |
3mcp_A | 366 | Crystal Structure Of Glucokinase (Bdi_1628) From Pa | 5e-05 | |
2ap1_A | 327 | Crystal Structure Of The Putative Regulatory Protei | 1e-19 | |
2aa4_A | 289 | Crystal Structure Of Escherichia Coli Putative N- A | 7e-15 | |
3eo3_A | 333 | Crystal Structure Of The N-Acetylmannosamine Kinase | 2e-14 | |
2q2r_A | 373 | Trypanosoma Cruzi Glucokinase In Complex With Beta- | 4e-10 | |
1z05_A | 429 | Crystal Structure Of The Rok Family Transcriptional | 4e-11 | |
3epq_A | 302 | Crystal Structure Of Fructokinase From Bacillus Sub | 0.004 | |
3ohr_A | 303 | Crystal Structure Of Fructokinase From Bacillus Sub | 0.004 |
>gi|51247222|pdb|1Q18|A Chain A, Crystal Structure Of E.Coli Glucokinase (Glk) Length = 332 | Back alignment and structure |
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 98/318 (30%), Positives = 155/318 (48%), Gaps = 10/318 (3%) Query: 16 LLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIA 75 L+ D+GGTN R A+ E T DY +LE I+ + + ++ +AIA Sbjct: 17 LVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVIRVYLEEH-KVEVKDGCIAIA 75 Query: 76 TPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFV 135 PI TN+ W E + F + +INDF A + AI L + + G Sbjct: 76 CPIT-GDWVAXTNHTWAFSIAEXKKNLGFSHLEIINDFTAVSXAIPXLKKEHLIQFGGAE 134 Query: 136 EDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFPHLTER 195 + G GTGLG++ ++ W+ + EGGH+D P+++ + I L Sbjct: 135 PVEGKPIAVY---GAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEAIILEILRAE 191 Query: 196 AEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKS---EDPIALKAINLFC 252 +SAE +LSG GLVN+Y+A+ AD + L KDI ++ +A++LFC Sbjct: 192 IG-HVSAERVLSGPGLVNLYRAIVKADN-RLPENLKPKDITERALADSCTDCRRALSLFC 249 Query: 253 EYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYV 312 GR G+LAL GGV+I+GGI + ++ + S FR +FE+K KE + IP Y+ Sbjct: 250 VIXGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYL 309 Query: 313 ITNPYIAIAGMVSYIKMT 330 I + + G ++++ T Sbjct: 310 IVHDNPGLLGSGAHLRQT 327 |
>gi|157835993|pdb|2QM1|A Chain A, Crystal Structure Of Glucokinase From Enterococcus Faecalis Length = 326 | Back alignment and structure |
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 110/340 (32%), Gaps = 49/340 (14%) Query: 14 PVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDY-------ENLEHAIQEVIYRKISIR 66 ++ D+GGT ++FAIL + + + +++T+ ++ +I+ I + Sbjct: 7 KIIGIDLGGTTIKFAILTT-DGVVQQKWSIETNILEDGKHIVPSIIESIRHRIDLYNXKK 65 Query: 67 LRSAFLAIATP----IGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICS 122 + TP I N +W + V A + Sbjct: 66 EDFVGIGXGTPGSVDIEKGTVVGAYNLNWT----------TVQPVK-EQIESALGIPFAL 114 Query: 123 LSCSNYVSIGQFVEDNRSLFSSRVIV--GPGTGLGISSVIRAKDSWIPISCEGGHMDIGP 180 + +N ++G+ + + + G G G GI + + + E GH+ + P Sbjct: 115 DNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDP 174 Query: 181 STQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKD------ 234 + R E + S G+V + + L +S + D Sbjct: 175 NG---------FDCTCGKRGCLETVSSATGVVRVARHLSEEFAGDSELKQAIDDGQDVSS 225 Query: 235 ----IVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSS 290 ++ D AL ++ C YLG G+L V I GG+ + LR+ Sbjct: 226 KDVFEFAEKGDHFALXVVDRVCFYLGLATGNLGNTLNP-DSVVIGGGVSAA-GEFLRS-- 281 Query: 291 FRESFENKSPHKELMRQIPTYVI-TNPYIAIAGMVSYIKM 329 E + + ++ + + G S Sbjct: 282 RVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 |
>gi|56554463|pdb|1XC3|A Chain A, Structure Of A Putative Fructokinase From Bacillus Subtilis Length = 302 | Back alignment and structure |
Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 94/316 (29%), Gaps = 44/316 (13%) Query: 21 GGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGD 80 GGT A+ R + + T + I++VI L++ + P+ + Sbjct: 11 GGTKFVCAVGREDGTIIDRIE-FPTK---MPDETIEKVIQYFSQFSLQAIGIGSFGPVDN 66 Query: 81 QKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRS 140 K+ + V + + + N ++G+F+ Sbjct: 67 DKTSQTYGTITATPKAGWRHYPFLQTVK-----NEMKIPVGFSTDVNAAALGEFLFGEAK 121 Query: 141 LFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRL 200 S + + GTG+G +++ + E GH+ I + +++ Sbjct: 122 GLDSCLYITIGTGIGAGAIVEGRLLQGLSHPEMGHIYI---RRHPDDVYQGKCPYHGD-- 176 Query: 201 SAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSEDPIALKAINLFCEYLGRVAG 260 E L SG + G ++ + + L Y+ + Sbjct: 177 CFEGLASGPAIE-------ARWGKKAADLSDIAQV------------WELEGYYIAQALA 217 Query: 261 DLALIFMARGGVYISGGIPY--KIIDLLRN--SSFRESFENKSPHKELMRQIPTYVI--- 313 LI + + + GG+ ++ + S+ + EL I Y++ Sbjct: 218 QYILILAPKK-IILGGGVMQQKQVFSYIYQYVPKIMNSYLD---FSELSDDISDYIVPPR 273 Query: 314 TNPYIAIAGMVSYIKM 329 I G + Sbjct: 274 LGSNAGIIGTLVLAHQ 289 |
>gi|109158083|pdb|2GUP|A Chain A, Structural Genomics, The Crystal Structure Of A Rok Family Protein From Streptococcus Pneumoniae Tigr4 In Complex With Sucrose Length = 292 | Back alignment and structure |
Score = 72.5 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 88/312 (28%), Gaps = 43/312 (13%) Query: 18 ADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATP 77 DIGGT ++FA L + + E+L + + + + ++ Sbjct: 9 IDIGGTGIKFASLTPDGKILDKTSISTPENLEDLLAWLDQRLSEQD---YSGIAXSVPGA 65 Query: 78 IGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVED 137 + + + + L + + +N V + + + Sbjct: 66 VNQETGVIDG----------FSAVPYIHGFSWYEALSSYQLPVHLENDANCVGLSELLAH 115 Query: 138 NRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAE 197 ++ V++G G G R + E G+ ++ Sbjct: 116 PELENAACVVIGTGIGGAXIINGRLHRGRHGLGGEFGYXTTLAPAEKLNN---------- 165 Query: 198 GRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSEDPIALKAINLFCEYLGR 257 L S V ++ K+ + + + + +AI L + Sbjct: 166 ----WSQLASTGNXVRYVIEKSGHTDWDGRKIYQE----AAAGNILCQEAIERXNRNLAQ 217 Query: 258 VAGDLALIFMARGGVYISGGIPYKIIDLLRN-----SSFRESFENKSPHKELMRQIPTYV 312 ++ + G + + G I D ++ F +++E +++ Sbjct: 218 GLLNIQYLIDP-GVISLGGSISQ-NPDFIQGVKKAVEDFVDAYEEY-TVAPVIQAC---- 270 Query: 313 ITNPYIAIAGMV 324 + + G + Sbjct: 271 TYHADANLYGAL 282 |
>gi|241913533|pdb|3HTV|A Chain A, Crystal Structure Of D-Allose Kinase (Np_418508.1) From Escherichia Coli K12 At 1.95 A Resolution Length = 310 | Back alignment and structure |
Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 97/326 (29%), Gaps = 50/326 (15%) Query: 17 LADIGGTNVRFAILRSMESEPEFCCTVQTSD--YENLEHAIQEVIYRKI---SIRLRSAF 71 D G T++RF + R+ E E C +T++ L I E I ++ + R Sbjct: 11 GVDXGATHIRFCL-RTAEGETLHCEKKRTAEVIAPGLVSGIGEXIDEQLRRFNARCHGLV 69 Query: 72 LAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSI 131 + K ++ + + +L L + E S + + Sbjct: 70 XGFPALVSKDKRTIISTPNLPLTAADLYD--------LADKLENTLNCPVEFSRDVNLQL 121 Query: 132 GQFVEDNRSLFSSRVIVGPGTGLGISSVIRA--KDSWIPISCEGGHMDIGPSTQRDYEIF 189 V +NR + GTG G + ++ E GH+ +G TQ Sbjct: 122 SWDVVENRLTQQLVLAAYLGTGXGFAVWXNGAPWTGAHGVAGELGHIPLGDXTQH----- 176 Query: 190 PHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSEDPIALKAIN 249 E SG L Y+ + + +D+ +E+ ++++ Sbjct: 177 ----CACGNPGCLETNCSGXALRRWYE--------QQPRNYPLRDLFVHAENAPFVQSL- 223 Query: 250 LFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIP 309 E R +F V + GG+ +F K L R +P Sbjct: 224 --LENAARAIATSINLFDP-DAVILGGGVX-------DXPAFPRETLVAXTQKYLRRPLP 273 Query: 310 ------TYVITNPYIAIAGMVSYIKM 329 ++ + G Sbjct: 274 HQVVRFIAASSSDFNGAQGAAILAHQ 299 |
>gi|290790234|pdb|3LM9|A Chain A, Crystal Structure Of Fructokinase With Adp And Fructose Bound In The Active Site Length = 302 | Back alignment and structure |
Score = 56.4 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 87/316 (27%), Gaps = 44/316 (13%) Query: 21 GGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGD 80 GGT A+ R + + T + I++VI L++ + P+ + Sbjct: 11 GGTKFVCAVGREDGTIIDRIE-FPTKX---PDETIEKVIQYFSQFSLQAIGIGSFGPVDN 66 Query: 81 QKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRS 140 K+ + V + + + N ++G+F+ Sbjct: 67 DKTSQTYGTITATPKAGWRHYPFLQTVK-----NEXKIPVGFSTDVNAAALGEFLFGEAK 121 Query: 141 LFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRL 200 S + + GTG+G +++ + E GH+ I + +++ Sbjct: 122 GLDSCLYITIGTGIGAGAIVEGRLLQGLSHPEXGHIYI---RRHPDDVYQGKCPYHGD-- 176 Query: 201 SAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSEDPIALKAINLFCEYLGRVAG 260 E L SG + G ++ + + IA Sbjct: 177 CFEGLASGPAIE-------ARWGKKAADLSDIAQVWELEGYYIAQALAQYILILAPXXII 229 Query: 261 DLALIFMARGGVYISGGIPY--KIIDLLRN--SSFRESFENKSPHKELMRQIPTYVI--- 313 GG+ ++ + S+ + EL I Y++ Sbjct: 230 L-------------GGGVXQQKQVFSYIYQYVPKIXNSYLD---FSELSDDISDYIVPPR 273 Query: 314 TNPYIAIAGMVSYIKM 329 I G + Sbjct: 274 LGSNAGIIGTLVLAHQ 289 |
>gi|295982537|pdb|3MCP|A Chain A, Crystal Structure Of Glucokinase (Bdi_1628) From Parabactero Distasonis Atcc 8503 At 3.00 A Resolution Length = 366 | Back alignment and structure |
Score = 53.3 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 87/309 (28%), Gaps = 40/309 (12%) Query: 19 DIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEV------IYRKISIRLRSAFL 72 D GGTN F+ ++ E + + + L+ + + I + + Sbjct: 15 DAGGTNFVFSAIQ-GGKEIADPVVLP-ACADCLDKCLGNLVEGFKAIQAGLPEAPVAISF 72 Query: 73 AIATPIGD-----QKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLS--C 125 A P ++ + + + V + ND A Sbjct: 73 AFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIPVFINNDGSLFAYGEALTGVLP 132 Query: 126 SNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRD 185 + + R V +G G G G+ Sbjct: 133 EINRRLREAGSTKRYKNLLGVTLGTGFGAGVVIDGELLRGDNAAGGY------------- 179 Query: 186 YEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSEDPIAL 245 L + E +S + + +Y G + K +++ P Sbjct: 180 ---VWCLRNKKYPEYIVEESVSIRAVXRVYAERSGDAGARTPK---EIFEIAEGIRPGNR 233 Query: 246 KAINLFCEYLGRVAGDL--ALIFMARGGVYISGGIPYK----IIDLLRNSSFRESFENKS 299 +A E LG AGD + I + G + I GG+ + LL+ + + + + Sbjct: 234 EAAIAAFEELGEXAGDALASAITLIDGLIVIGGGLSGASKYILPVLLKEXNAQTGXXDGA 293 Query: 300 PHKELMRQI 308 L +++ Sbjct: 294 RFGRLQKEV 302 |
>gi|78101419|pdb|2AP1|A Chain A, Crystal Structure Of The Putative Regulatory Protein Length = 327 | Back alignment and structure |
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 78/269 (28%), Gaps = 24/269 (8%) Query: 19 DIGGTNVRFAILRSMESEPEFCCTVQTS--DYENLEHAIQEVIYRKISIRL--RSAFLAI 74 DIGGT + + S ++ V T Y A+ E++ S + I Sbjct: 30 DIGGTKIALGVFDSTR-RLQWEKRVPTPHTSYSAFLDAVCELVEEADQRFGVKGSVGIGI 88 Query: 75 ATPIGDQKSFTLTNYHWVIDPEELISRMQ---FEDVLLINDFEAQALAICSLSCSNYVSI 131 + + L + + DV L ND AL+ + Sbjct: 89 PGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAW--DDEFTQY 146 Query: 132 GQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFPH 191 + +V G + S I + + + + + R Sbjct: 147 PLVMGLILGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDFPLR------- 199 Query: 192 LTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSEDPIALKAINLF 251 EN LSG+G +Y+ ++ + + + D A + + Sbjct: 200 -RCGCGQMGCIENYLSGRGFAWLYQ-----HYYDQSLQAPEIIALWEQGDEQAHAHVERY 253 Query: 252 CEYLGRVAGDLALIFMARGGVYISGGIPY 280 + L G++ I + I GG+ Sbjct: 254 LDLLAVCLGNILTIVDP-DLLVIGGGLSN 281 |
>gi|73536195|pdb|2AA4|A Chain A, Crystal Structure Of Escherichia Coli Putative N- Acetylmannosamine Kinase, New York Structural Genomics Consortium Length = 289 | Back alignment and structure |
Score = 86.0 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 85/273 (31%), Gaps = 37/273 (13%) Query: 13 FPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISI---RLRS 69 L DIGGT + A++ + + + T + E A+++ + +S + Sbjct: 1 MTTLAIDIGGTKLAAALI-GADGQIRDRRELPTPASQTPE-ALRDALSALVSPLQAHAQR 58 Query: 70 AFLAIATPIGDQKSFTLTNYH----WVIDPEELISRMQFEDVLLINDFEAQALAICSLSC 125 +A I D L ++ + + ++ + IND +A A A Sbjct: 59 VAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALD 118 Query: 126 SNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRD 185 + + + V G G G+ S + ++ GH P Sbjct: 119 GDITDM------------VFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGP-- 164 Query: 186 YEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSEDPIAL 245 E + SG+G+ A G + + + D A Sbjct: 165 -------VCGCGRTGCVEAIASGRGIA------AAAQGELAGADAKTIFTRAGQGDEQAQ 211 Query: 246 KAINLFCEYLGRVAGDLALIFMARGGVYISGGI 278 + I+ L R+ D+ + V + G + Sbjct: 212 QLIHRSARTLARLIADIKATTDCQ-CVVVGGSV 243 |
>gi|209156783|pdb|3EO3|A Chain A, Crystal Structure Of The N-Acetylmannosamine Kinase Domain Of Human Gne Protein Length = 333 | Back alignment and structure |
Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 80/298 (26%), Gaps = 42/298 (14%) Query: 16 LLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLR------S 69 L D+GGTN+R AI+ + YE + I ++ + ++ Sbjct: 23 LAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILG 82 Query: 70 AFLAIATPIG--DQKSFTLTNYHWVIDPEELISRMQ---FEDVLLINDFEAQALAICSLS 124 ++ + + T + +L + + V + ND ALA Sbjct: 83 VGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFG 142 Query: 125 CSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQR 184 +I G G G GI + E GH+ + Sbjct: 143 QG-----------KGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPD 191 Query: 185 DYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALC-------IADGFESNKVLSSKDIVS 237 E SG L K L ++ + + ++ Sbjct: 192 ---------CSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQ 242 Query: 238 KSE--DPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRE 293 ++ + A + LG ++ + I G+ + R+ Sbjct: 243 AAKLGNAKAQSILRTAGTALGLGVVNILHTMNPS--LVILSGVLASHYIHIVKDVIRQ 298 |
>gi|158429624|pdb|2Q2R|A Chain A, Trypanosoma Cruzi Glucokinase In Complex With Beta-D- Glucose And Adp Length = 373 | Back alignment and structure |
Score = 70.2 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 98/292 (33%), Gaps = 25/292 (8%) Query: 17 LADIGGTNVRFAILRSMESEPEFCCTVQT----SDYENLEHAIQEVIYRKISI---RLRS 69 + D+GGT+ R +R +++ C + D + E+I + R+++ Sbjct: 33 VGDVGGTSARMGFVREGKNDSVHACVTRYSMKRKDITEIIEFFNEIIELMPASVMKRVKA 92 Query: 70 AFLAIATPIGDQKSFTLTNYHWVIDP--EELISRMQFEDVLLINDFEAQALAICSLSCSN 127 + + P+ N I + + ++ND EA + ++S ++ Sbjct: 93 GVINVPGPVTGGAVGGPFNNLKGIARLSDYPKALFPPGHSAILNDLEAGGFGVLAVSDAH 152 Query: 128 YVSIGQFVEDNR--------------SLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEG 173 S V +++ PGTGLG S + I Sbjct: 153 VFSEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTGLGSSLIYYNPPMNQHIVVPL 212 Query: 174 GHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSK 233 ++D + L + + EN++SG GL Y+ + G Sbjct: 213 ELGSQTLPMRKDIDYIQTLHAELKLFPNYENMVSGAGLEFHYR--QVVRGSRPPCSAGEI 270 Query: 234 DIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDL 285 ++ D A KA+ + EYL RV + ++ + V + I Sbjct: 271 AKLASEGDANACKAMKKYHEYLMRVGSEASMALLPLTIVLVGDNIVNNAFFY 322 |
>gi|62738865|pdb|1Z05|A Chain A, Crystal Structure Of The Rok Family Transcriptional Regulator, Homolog Of E.Coli Mlc Protein Length = 429 | Back alignment and structure |
Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 79/249 (31%), Gaps = 32/249 (12%) Query: 50 NLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQF---ED 106 +E Q + R+ S + + + ++ L H+ + L + Sbjct: 154 EIEEFFQTYAAQLD--RVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLP 211 Query: 107 VLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSW 166 V + ND A ALA S S + + G G GI R Sbjct: 212 VFVANDTRAWALAEKLFGHSQ-----------DVDNSVLISIHHGLGAGIVLDGRVLQGR 260 Query: 167 IPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIA---DG 223 E GH+ I P + E + S + + + A A Sbjct: 261 HGNIGELGHIQIDPQGK---------RCHCGNYGCLETVASSQAIRDQVTARIQAGEPSC 311 Query: 224 FESNKVLSSKDIVSKS--EDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYK 281 + + +S +DI + + DP+A+ I YLG + +F + GG+ + Sbjct: 312 LATVEEISIEDICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEK--ILIGGVINQ 369 Query: 282 IIDLLRNSS 290 +L S Sbjct: 370 AKSILYPSI 378 |
>gi|306992066|pdb|3OHR|A Chain A, Crystal Structure Of Fructokinase From Bacillus Subtilis Complexed With Adp Length = 303 | Back alignment and structure |
Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 60/195 (30%), Gaps = 14/195 (7%) Query: 21 GGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGD 80 GGT A+ R + + T + + + + L++ + P+ + Sbjct: 12 GGTXFVCAVGREDGTIIDRIE-FPTXXPDETIEXVIQYFSQF---SLQAIGIGSFGPVDN 67 Query: 81 QKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRS 140 + + V + + + N ++G+F+ Sbjct: 68 DXTSQTYGTITATPXAGWRHYPFLQTV-----XNEXXIPVGFSTDVNAAALGEFLFGEAX 122 Query: 141 LFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRL 200 S + + GTG+G +++ + E GH+ I + +++ Sbjct: 123 GLDSCLYITIGTGIGAGAIVEGRLLQGLSHPEXGHIYI---RRHPDDVYQGXCPYHGD-- 177 Query: 201 SAENLLSGKGLVNIY 215 E L SG + + Sbjct: 178 CFEGLASGPAIEARW 192 |
Homologous Structures in PDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 348 | glucokinase [Candidatus Liberibacter asiaticus str. psy | ||
1sz2_A | 332 | Glucokinase, glucose kinase; ATP-dependent, glucose bin | 3e-35 | |
2q2r_A | 373 | Glucokinase 1, putative; ATPase hexose kinase family, t | 1e-30 | |
2ch5_A | 347 | NAGK protein; transferase, N-acetylglucosamine, glcnac, | 2e-04 | |
3epq_A | 302 | Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, s | 0.001 | |
3htv_A | 310 | D-allose kinase, allokinase; NP_418508.1, structural ge | 0.002 | |
3mcp_A | 366 | Glucokinase; structural genomics, joint center for stru | 2e-14 | |
3eo3_A | 333 | Bifunctional UDP-N-acetylglucosamine 2- epimerase/N-ace | 8e-07 | |
2qm1_A | 326 | Glucokinase; alpha-beta structure, putative helix-turn- | 2e-05 | |
1z05_A | 429 | Transcriptional regulator, ROK family; structural genom | 3e-05 | |
1zc6_A | 305 | Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo | 6e-04 | |
3lm2_A | 226 | Putative kinase; structural genomics, joint center for | 4e-04 |
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A* Length = 332 | Back alignment and structure |
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Score = 144 bits (362), Expect = 3e-35 Identities = 93/318 (29%), Positives = 150/318 (47%), Gaps = 8/318 (2%) Query: 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAI 74 L+ D+GGTN R A+ E T DY +LE I+ + + + ++ +AI Sbjct: 16 ALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVIRVYL-EEHKVEVKDGCIAI 74 Query: 75 ATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQF 134 A PI +TN+ W E+ + F + +INDF A ++AI L + + G Sbjct: 75 ACPI-TGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGA 133 Query: 135 VEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFPHLTE 194 + G GTGLG++ ++ W+ + EGGH+D P+++ + I L Sbjct: 134 EPVEGKPI---AVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEAIILEIL-R 189 Query: 195 RAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSEDPIALKAINLFC-- 252 G +SAE +LSG GLVN+Y+A+ AD + D L Sbjct: 190 AEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDITERALADSCTDCRRALSLFC 249 Query: 253 EYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYV 312 +GR G+LAL GGV+I+GGI + ++ + S FR +FE+K KE + IP Y+ Sbjct: 250 VIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYL 309 Query: 313 ITNPYIAIAGMVSYIKMT 330 I + + G ++++ T Sbjct: 310 IVHDNPGLLGSGAHLRQT 327 |
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi} Length = 373 | Back alignment and structure |
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Score = 128 bits (323), Expect = 1e-30 Identities = 52/353 (14%), Positives = 116/353 (32%), Gaps = 36/353 (10%) Query: 5 SKKDFPIAFPVLLADIGGTNVRFAILRSMESEPEFCC----TVQTSDYENLEHAIQEVI- 59 K A + D+GGT+ R +R +++ C +++ D + E+I Sbjct: 21 LKTPAWNAPLTFVGDVGGTSARMGFVREGKNDSVHACVTRYSMKRKDITEIIEFFNEIIE 80 Query: 60 --YRKISIRLRSAFLAIATPI-GDQKSFTLTNYHWVIDPEE-LISRMQFEDVLLINDFEA 115 + R+++ + + P+ G N + + + ++ND EA Sbjct: 81 LMPASVMKRVKAGVINVPGPVTGGAVGGPFNNLKGIARLSDYPKALFPPGHSAILNDLEA 140 Query: 116 QALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVI--------------- 160 + ++S ++ S V + + + G+ +G + Sbjct: 141 GGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTGLGSSLIYY 200 Query: 161 -RAKDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALC 219 + I + E G + DY H + + EN++SG GL Y+ + Sbjct: 201 NPPMNQHIVVPLELGSQTLPMRKDIDYIQTLHA--ELKLFPNYENMVSGAGLEFHYRQVV 258 Query: 220 IADGFESNKVLSSKDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMAR-----GGVYI 274 + ++ D A KA+ + EYL RV + ++ + G + Sbjct: 259 RGSRPPCS--AGEIAKLASEGDANACKAMKKYHEYLMRVGSEASMALLPLTIVLVGDNIV 316 Query: 275 SGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPY-IAIAGMVSY 326 + Y+ L+ E+ ++ ++ + + G Sbjct: 317 NNAFFYRNPQNLK-EMHHEALNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRC 368 |
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, ribonuclease H fold, sugar kinase/HSP70/actin superfamily, domain rotation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* Length = 347 | Back alignment and structure |
---|
Score = 41.9 bits (97), Expect = 2e-04 Identities = 32/316 (10%), Positives = 70/316 (22%), Gaps = 35/316 (11%) Query: 19 DIGGTNVRFA-------ILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKIS-IRLRSA 70 + GGT IL + + I E++ R + Sbjct: 12 EGGGTRSEVLLVSEDGKILAEADGLS---TNHWLIGTDKCVERINEMVNRAKRKAGVDPL 68 Query: 71 FLAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVS 130 + + +I+ E L+ D +S Sbjct: 69 VPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGGVVLIS 128 Query: 131 IGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFP 190 L + G G WI D + + Sbjct: 129 GTGSN---CRLINPDGSESGCGGWGHMMGDEGSAYWIAHQAVKIVFDSIDNLEAAPHDIG 185 Query: 191 HLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVS---KSEDPIALKA 247 ++ + + L + F+ + ++ + DP++ Sbjct: 186 YVKQAMFHYFQVPDRLGILTHL--------YRDFDKCRFAGFCRKIAEGAQQGDPLSRYI 237 Query: 248 INLFCEYLGRVAGDLALIF-------MARGGVYISGGIPYKIIDLLRNSSFRESFENKSP 300 E LGR + + G + +K +LL+ F + Sbjct: 238 FRKAGEMLGRHIVAVLPEIDPVLFQGKIGLPILCVGSV-WKSWELLKE-GFLLALTQGRE 295 Query: 301 HKELMRQIPTYVITNP 316 + ++ + Sbjct: 296 -IQAQNFFSSFTLMKL 310 |
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12} Length = 310 | Back alignment and structure |
---|
Score = 38.4 bits (88), Expect = 0.002 Identities = 47/289 (16%), Positives = 84/289 (29%), Gaps = 31/289 (10%) Query: 19 DIGGTNVRFAILRSMESEPEFCCTVQT--SDYENLEHAIQEVIYRKI-SIRLRSAFLAIA 75 D+G T++RF + + E E C +T L I E+I ++ R L + Sbjct: 13 DMGATHIRFCLR-TAEGETLHCEKKRTAEVIAPGLVSGIGEMIDEQLRRFNARCHGLVMG 71 Query: 76 TPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFV 135 P K + P ++ D+ + S + +S Sbjct: 72 FPALVSKD----KRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVE 127 Query: 136 EDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFPHLTER 195 +G G G + ++ E GH+ +G TQ Sbjct: 128 NRLTQQLVLAAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMTQHCA--------- 178 Query: 196 AEGRLSAENLLSGKGLVNIYKAL----CIADGFESNKVLSSKDIVSKSEDPIALKAINLF 251 E SG L Y+ + D F + + ++ +INLF Sbjct: 179 CGNPGCLETNCSGMALRRWYEQQPRNYPLRDLFVHAENAPFVQSLLENAARAIATSINLF 238 Query: 252 CEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSP 300 D + + GGV P + + + R ++ Sbjct: 239 ---------DPDAVILG-GGVMDMPAFPRETLVAMTQKYLRRPLPHQVV 277 |
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis} Length = 366 | Back alignment and structure |
---|
Score = 75.4 bits (185), Expect = 2e-14 Identities = 42/276 (15%), Positives = 89/276 (32%), Gaps = 30/276 (10%) Query: 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVI--YRKISIRLRSAFL 72 V+ D GGTN F+ ++ + V + + L+ + ++ ++ I L A + Sbjct: 11 VMTLDAGGTNFVFSAIQ--GGKEIADPVVLPACADCLDKCLGNLVEGFKAIQAGLPEAPV 68 Query: 73 AI--ATP-IGDQK------SFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSL 123 AI A P D + ++ + + + V + ND A Sbjct: 69 AISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIPVFINNDGSLFAYGEALT 128 Query: 124 SCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQ 183 ++ + + + + V GTG G + V+ + + GG+ + Sbjct: 129 GVLPEINRRLREAGSTKRYKNLLGVTLGTGFG-AGVVIDGELLRGDNAAGGY--VW---- 181 Query: 184 RDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNK-VLSSKDIVSKSEDP 242 L + E +S + ++ +Y G + K + + + Sbjct: 182 -------CLRNKKYPEYIVEESVSIRAVMRVYAERSGDAGARTPKEIFEIAEGIRPGNRE 234 Query: 243 IALKAINLFCEYLGRVAGDLALIFMARGGVYISGGI 278 A+ A E G + + I GG+ Sbjct: 235 AAIAAFEELGEMAGDALASAITLIDGL--IVIGGGL 268 |
>3eo3_A Bifunctional UDP-N-acetylglucosamine 2- epimerase/N-acetylmannosamine kinase; non-protein kinase, sialic acid biosynthesis; 2.84A {Homo sapiens} Length = 333 | Back alignment and structure |
---|
Score = 49.7 bits (117), Expect = 8e-07 Identities = 41/289 (14%), Positives = 80/289 (27%), Gaps = 19/289 (6%) Query: 9 FPIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLR 68 F L D+GGTN+R AI+ + YE + I ++ + ++ Sbjct: 16 FQGTLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVK 75 Query: 69 SAFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNY 128 + I + + + + ++D + + + Sbjct: 76 LNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAA 135 Query: 129 VSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEI 188 ++ +F + +I G G G GI + E GH+ + Sbjct: 136 LAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCG 195 Query: 189 FPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSED------- 241 E SG L K L D + KD + Sbjct: 196 SHG---------CIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKL 246 Query: 242 --PIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRN 288 A + LG ++ V +SG + I ++++ Sbjct: 247 GNAKAQSILRTAGTALGLGVVNILHTMNP-SLVILSGVLASHYIHIVKD 294 |
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis V583} Length = 326 | Back alignment and structure |
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Score = 45.5 bits (106), Expect = 2e-05 Identities = 49/286 (17%), Positives = 98/286 (34%), Gaps = 24/286 (8%) Query: 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAI 74 ++ D+GGT ++FAIL + + + +++T+ E+ +H + +I Sbjct: 8 IIGIDLGGTTIKFAIL-TTDGVVQQKWSIETNILEDGKHIVPSIIESIRHRIDLYNMKKE 66 Query: 75 ATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQF 134 + + + A + + +N ++G+ Sbjct: 67 DFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGER 126 Query: 135 VEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIP--ISCEGGHMDIGPSTQRDYEIFPHL 192 + + + GTG+G V K + E GH+ + P+ Sbjct: 127 WKGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCTCGKRGC 186 Query: 193 TERAEGRLSAENLLSGKGLVNIYKALC--------IADGFESNKVLSSKDIVSKSED--P 242 E + S G+V + + L + + + +SSKD+ +E Sbjct: 187 L---------ETVSSATGVVRVARHLSEEFAGDSELKQAIDDGQDVSSKDVFEFAEKGDH 237 Query: 243 IALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRN 288 AL ++ C YLG G+L V I GG+ + LR+ Sbjct: 238 FALMVVDRVCFYLGLATGNLGNTLNPD-SVVIGGGVS-AAGEFLRS 281 |
>1z05_A Transcriptional regulator, ROK family; structural genomics, PSI, protein structure initiative; 2.00A {Vibrio cholerae o1 biovar eltor str} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Length = 429 | Back alignment and structure |
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Score = 44.5 bits (104), Expect = 3e-05 Identities = 36/277 (12%), Positives = 79/277 (28%), Gaps = 20/277 (7%) Query: 10 PIAFPVLLADIGGTNVRFAIL-RSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLR 68 + + L +G + A+ E + + D +++ + I Sbjct: 105 NLGWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIEEFFQTYAA 164 Query: 69 SAFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNY 128 + I + P + + + +A + + + Sbjct: 165 QLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALA 224 Query: 129 VSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEI 188 + +D + + G G G D + G ++G +I Sbjct: 225 EKLFGHSQDVDNSVLISIHHGLGAG-------IVLDGRVLQGRHGNIGELGH-----IQI 272 Query: 189 FPHLTERAEGRLSAEN-LLSGKGLVNIYKALCIA---DGFESNKVLSSKDIVSKSED--P 242 P G + S + + + A A + + +S +DI + + D P Sbjct: 273 DPQGKRCHCGNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAAADGDP 332 Query: 243 IALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIP 279 +A+ I YLG + +F + I G I Sbjct: 333 LAVDVIQQLGRYLGAAIAIVINLFNPE-KILIGGVIN 368 |
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, structural genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum atcc 12472} SCOP: c.55.1.5 c.55.1.5 Length = 305 | Back alignment and structure |
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Score = 40.5 bits (93), Expect = 6e-04 Identities = 36/270 (13%), Positives = 61/270 (22%), Gaps = 18/270 (6%) Query: 19 DIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPI 78 D GGT R + + + P S + + + + A L A Sbjct: 17 DGGGTGTRIRLH-ASDGTPLAMAEGGASALSQGIAKSWQAVLSTLEAAFQQAGLPAAPAS 75 Query: 79 GDQKSFTLTNYHWVIDPEELISR-MQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVED 137 L+ H E S+ F + L D L V++G Sbjct: 76 ACAIGLGLSGVHNRQWAGEFESQAPGFARLSLATDGYTTLLGAHGGQPGIIVALGTGSIG 135 Query: 138 NRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAE 197 G G + LT Sbjct: 136 EALYPDGSHREAGGWGYPSGDEASGAWLGQRAAQLTQMA------LDGRHSHSPLTRAVL 189 Query: 198 GRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSEDPIALKAINLFCEYLGR 257 + ++ A ++ + + DP A + E Sbjct: 190 ----DFVGGDWQAMMAWNGRATPAQFARLAPLV----LSAARVDPEADALLRQAGEDAWA 241 Query: 258 VAGDLALIFMARGGVYISGGIPYKIIDLLR 287 +A L V + GG+ + D L Sbjct: 242 IARALDPQDELP--VALCGGLGQALRDWLP 269 |
>3lm2_A Putative kinase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, transferase; HET: MSE; 1.70A {Agrobacterium tumefaciens} Length = 226 | Back alignment and structure |
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Score = 41.0 bits (96), Expect = 4e-04 Identities = 29/207 (14%), Positives = 63/207 (30%), Gaps = 36/207 (17%) Query: 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAI 74 VL DIGG++V+ + + E + +T + A+ + + +A+ Sbjct: 8 VLAIDIGGSHVKIGLS--TDGEERKVESGKTMTGPEMVAAVTAMA-----KDMTYDVIAM 60 Query: 75 ATP---IGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSI 131 P + ++ N + V ++ND QA+ Sbjct: 61 GYPGPVVHNKPLREPVNLGEGWVGYDYEGAFGRP-VRIVNDALMQAIG------------ 107 Query: 132 GQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFPH 191 + +G GTGLG + ++ E H+ ++ + Sbjct: 108 -------SYNGGRMLFLGLGTGLGAAMIVENV----AQPMEIAHLPYRKGKTYEHYVSEA 156 Query: 192 LTERAEGRLSAENLLSGKGLVNIYKAL 218 E+ + + + + AL Sbjct: 157 YREKKGNAKWQKRV--QDVVERLSAAL 181 |
Homologous Structures in PDB70 Database Detected by HHsearch
Original result of HHsearch against PDB70 database
Identity | Alignment graph | Length | Definition | Probability |
Target | 348 | glucokinase [Candidatus Liberibacter asiaticus str. psy | ||
1sz2_A | 332 | Glucokinase, glucose kinase; ATP-dependent, glucose bin | 100.0 | |
2q2r_A | 373 | Glucokinase 1, putative; ATPase hexose kinase family, t | 100.0 | |
1z05_A | 429 | Transcriptional regulator, ROK family; structural genom | 100.0 | |
3eo3_A | 333 | Bifunctional UDP-N-acetylglucosamine 2- epimerase/N-ace | 100.0 | |
2gup_A | 292 | ROK family protein; sugar kinase, APC80695, sucrose, st | 100.0 | |
2qm1_A | 326 | Glucokinase; alpha-beta structure, putative helix-turn- | 100.0 | |
3epq_A | 302 | Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, s | 100.0 | |
2aa4_A | 289 | Mannac kinase, putative N-acetylmannosamine kinase; sug | 100.0 | |
3mcp_A | 366 | Glucokinase; structural genomics, joint center for stru | 100.0 | |
1z6r_A | 406 | MLC protein; transcriptional repressor, ROK family prot | 100.0 | |
2hoe_A | 380 | N-acetylglucosamine kinase; TM1224, structural genomics | 100.0 | |
3htv_A | 310 | D-allose kinase, allokinase; NP_418508.1, structural ge | 100.0 | |
2ap1_A | 327 | Putative regulator protein; zinc binding protein, struc | 100.0 | |
3lm2_A | 226 | Putative kinase; structural genomics, joint center for | 100.0 | |
1woq_A | 267 | Inorganic polyphosphate/ATP-glucomannokinase; transfera | 100.0 | |
2ch5_A | 347 | NAGK protein; transferase, N-acetylglucosamine, glcnac, | 99.96 | |
2e2o_A | 299 | Hexokinase; acetate and sugar kinases, HSP70, actin sup | 99.95 | |
1zc6_A | 305 | Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo | 99.88 | |
2ews_A | 287 | Pantothenate kinase; PANK, structural genomics, structu | 99.79 | |
3hm8_A | 445 | Hexokinase-3; glucose, glucose-6-phosphate, non-protein | 99.5 | |
3o8m_A | 485 | Hexokinase; rnaseh-like fold, glycolysis, glucose repre | 99.44 | |
3f9m_A | 470 | Glucokinase; hexokinase IV, alternative splicing, ATP- | 99.43 | |
1bdg_A | 451 | Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schist | 99.41 | |
1zbs_A | 291 | Hypothetical protein PG1100; alpha-beta protein., struc | 99.36 | |
2yhx_A | 457 | Hexokinase B; transferase(phosphoryl,alcohol acceptr); | 99.36 | |
1cza_N | 917 | Hexokinase type I; structurally homologous domains, tra | 99.35 | |
1zxo_A | 291 | Conserved hypothetical protein Q8A1P1; NESG, BTR25, str | 99.21 | |
1saz_A | 381 | Probable butyrate kinase 2; askha (acetate and sugar ki | 98.56 | |
3bex_A | 249 | Type III pantothenate kinase; actin-like fold, ATP-bind | 98.01 | |
2h3g_X | 268 | Biosynthetic protein; pantothenate kinase, anthrax, typ | 97.62 | |
2ivn_A | 330 | O-sialoglycoprotein endopeptidase; UP1 keops complex, F | 95.93 | |
3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/protei | 92.76 | |
1cza_N | 917 | Hexokinase type I; structurally homologous domains, tra | 99.41 | |
1g99_A | 408 | Acetate kinase; alpha/beta, askha (acetate and sugar ki | 98.46 | |
2i7n_A | 360 | Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.9 | 98.17 | |
3ll3_A | 504 | Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xyl | 97.76 | |
3g25_A | 501 | Glycerol kinase; IDP00743, ATP-binding, glycerol metabo | 97.57 | |
3h6e_A | 482 | Carbohydrate kinase, FGGY; novosphingobium aromaticivor | 97.41 | |
3l0q_A | 554 | Xylulose kinase; xlylulose kinase, SGX, PSI, structural | 97.27 | |
3ifr_A | 508 | Carbohydrate kinase, FGGY; xylulose kinase, SGX, struct | 97.25 | |
3h3n_X | 506 | Glycerol kinase; ATP-binding, glycerol metabolism, nucl | 97.14 | |
2p3r_A | 510 | Glycerol kinase; glycerol metabolism, allosteric regula | 97.07 | |
2zf5_O | 497 | Glycerol kinase; hyperthermophilic archaeon, ATP-bindin | 97.03 | |
2d4w_A | 504 | Glycerol kinase; alpha and beta protein, ribonuclease H | 96.96 | |
2v7y_A | 509 | Chaperone protein DNAK; HSP70, heat shock protein, ATPa | 96.89 | |
2w40_A | 503 | Glycerol kinase, putative; closed conformation, malaria | 96.73 | |
2dpn_A | 495 | Glycerol kinase; thermus thermophilus HB8, structural g | 96.72 | |
1yuw_A | 554 | Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bo | 96.38 | |
1hux_A | 270 | Activator of (R)-2-hydroxyglutaryl-COA dehydratase; act | 98.98 | |
3h1q_A | 272 | Ethanolamine utilization protein EUTJ; structural genom | 97.63 | |
1vhx_A | 150 | Putative holliday junction resolvase; structural genomi | 96.58 | |
1iv0_A | 98 | Hypothetical protein; rnaseh-like, YQGF, structural gen | 96.27 | |
1nu0_A | 138 | Hypothetical protein YQGF; structural genomics, structu | 96.02 | |
3p4i_A | 392 | Acetate kinase; structural genomics, seattle structural | 98.75 | |
2iir_A | 403 | Acetate kinase; transferase; 3.30A {Thermotoga maritima | 98.48 | |
3khy_A | 384 | Propionate kinase; csgid, IDP01739, ATP-binding, nucleo | 98.38 | |
3cet_A | 334 | Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, | 90.79 | |
2e1z_A | 415 | Propionate kinase; TDCD, native, acetate kinase, nucleo | 98.09 | |
3i8b_A | 515 | Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J, | 97.56 | |
2itm_A | 484 | Xylulose kinase, xylulokinase; ATPase, FGGY kinase, tra | 97.31 | |
2uyt_A | 489 | Rhamnulokinase; rhamnose degradation, IN-LINE phosphory | 96.97 | |
1e4f_T | 419 | Cell division protein FTSA; bacterial cell division, ac | 92.8 | |
2f9w_A | 271 | Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A | 97.51 | |
3djc_A | 266 | Type III pantothenate kinase; structural genomics, puta | 96.05 | |
3hz6_A | 511 | Xylulokinase; xylulose, structural genomic, manolate, t | 97.49 | |
3jvp_A | 572 | Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar k | 97.46 | |
3i33_A | 404 | Heat shock-related 70 kDa protein 2; protein-ADP comple | 97.42 | |
3d2f_A | 675 | Heat shock protein homolog SSE1; nucleotide exchange fa | 96.1 | |
1jce_A | 344 | ROD shape-determining protein MREB; MBL, actin, HSP-70, | 91.61 |
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A* | Back alignment and structure |
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Probab=100.00 E-value=0 Score=337.12 Aligned_cols=315 Identities=30% Similarity=0.511 Sum_probs=267.6 Q ss_pred CCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCC Q ss_conf 77379998575118999987799808899974388735889999999972234565546999730441685564213566 Q gi|254780280|r 12 AFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYHW 91 (348) Q Consensus 12 ~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~~~~~ 91 (348) ..=.|++||||||||+|++|+++.++...++++++++++++++|++++++. ..++.++||++||||+.+... ..+..+ T Consensus 13 ~~y~L~~DIGGT~ir~alvd~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~igI~~pGpv~~~~~~-~~~~~~ 90 (332) T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVIRVYLEEH-KVEVKDGCIAIACPITGDWVA-MTNHTW 90 (332) T ss_dssp -CEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHS-CCCCCEEEEEESSCCCSSEEC-CSSSCC T ss_pred CCEEEEEEECHHHHHHEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHC-CCCCCEEEEEECCCCCCCEEE-EECCCC T ss_conf 328999998815432556989999897889878987647999999999865-998775999902564287346-631433 Q ss_pred CCCHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEECCC Q ss_conf 66988999982898558821265432000015865535302434557666752799317620224543105886301135 Q gi|254780280|r 92 VIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISC 171 (348) Q Consensus 92 ~~~~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~ag 171 (348) .++..++...+...++.+.||+++.++++....+.....++. +....+..++++++|||.|.+...+...|.+..++ T Consensus 91 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~lgtG~G~g~~~~~~~~~g~~~~ag 167 (332) T 1sz2_A 91 AFSIAEMKKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGG---AEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPG 167 (332) T ss_dssp CEEHHHHHHHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSS---CCCCTTCCEEEEEESSSEEEEEEEEETTEEEEEEC T ss_pred CCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCC---CCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCC T ss_conf 578689987642563566237332122444455646777376---77888626999837665656786034566543455 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHCCCHHHHHHHH Q ss_conf 67866667661023478999985318986487752222389999999874088864369888--9988368957999999 Q gi|254780280|r 172 EGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSK--DIVSKSEDPIALKAIN 249 (348) Q Consensus 172 E~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~--~~~~~~~D~~A~~~~~ 249 (348) |.||+.+.+....+....++ .|.|++.+|+|+++||++|.++|+++............... +......|+.+.++++ T Consensus 168 e~G~~~~~~~~~~~~~~~~~-~~~~~~~g~~E~~~Sg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332) T 1sz2_A 168 EGGHVDFAPNSEEEAIILEI-LRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDITERALADSCTDCRRALS 246 (332) T ss_dssp CGGGSBCCCCSHHHHHHHHH-HHHHSSSCBGGGTSSHHHHHHHHHHHHHHTTCCCCCCCHHHHHHHHHHTCCHHHHHHHH T ss_pred CCCCCCCCCCCHHHHHHHHH-HHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH T ss_conf 55665667765033211112-22036743001013121389999999742688831146278999987301267899999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHC Q ss_conf 99999999999999974899738996567765567727648999988379837889738879995787227759998738 Q gi|254780280|r 250 LFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAGMVSYIKM 329 (348) Q Consensus 250 ~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~GAa~~~r~ 329 (348) .+.++++..+.++++.+.|.+.|||||||+.++.+++.++.|+++|.+++++.++++++||++++++|+||+|||+|+|| T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~IviGGGv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ipv~~~~~~dagliGAa~~ar~ 326 (332) T 1sz2_A 247 LFCVIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQ 326 (332) T ss_dssp HHHHHHHHHHHHHHHHHTCTTEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEECCSCHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHH T ss_conf 99999999999999985899789996417750476628099999998446356686068889998985749999999998 Q ss_pred CCC Q ss_conf 001 Q gi|254780280|r 330 TDC 332 (348) Q Consensus 330 ~~~ 332 (348) +-. T Consensus 327 ~l~ 329 (332) T 1sz2_A 327 TLG 329 (332) T ss_dssp HTT T ss_pred HHC T ss_conf 611 |
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi} | Back alignment and structure |
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Probab=100.00 E-value=0 Score=325.08 Aligned_cols=315 Identities=17% Similarity=0.211 Sum_probs=240.6 Q ss_pred CCCCCCCCEEEEEECCCCEEEEEEECCCCEEEE----EEEECCCCCCCHHHHHHHHHHHCC---CCCCCEEEEEEEEEEE Q ss_conf 587667737999857511899998779980889----997438873588999999997223---4565546999730441 Q gi|254780280|r 7 KDFPIAFPVLLADIGGTNVRFAILRSMESEPEF----CCTVQTSDYENLEHAIQEVIYRKI---SIRLRSAFLAIATPIG 79 (348) Q Consensus 7 ~~~~~~~~vL~iDIGGT~ir~glv~~~~~~i~~----~~~~~t~~~~~~~~~i~~~l~~~~---~~~~~~igi~v~Gpv~ 79 (348) ++-+.++ +|++||||||+|+|+++..+..+.. ..+.++.+++++.+.+.+++++.. ..++.+++|++||||+ T Consensus 24 ~~~~~pl-~Lv~DIGGTnir~alv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~ia~pGpv~ 102 (373) T 2q2r_A 24 PAWNAPL-TFVGDVGGTSARMGFVREGKNDSVHACVTRYSMKRKDITEIIEFFNEIIELMPASVMKRVKAGVINVPGPVT 102 (373) T ss_dssp GGGCSCE-EEEEEECSSEEEEEEEEECGGGCEEEEEEEEECTTCBGGGHHHHHHHHHHHSCHHHHTTEEEEEEEESSCEE T ss_pred CCCCCCC-EEEEEECCHHEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEE T ss_conf 5667994-899997823332278988997478888852168889999999999999999987548887879998230277 Q ss_pred CCCEEE-ECCCCCCCCHHH-HHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHC--------------CCCCCCCCCCC Q ss_conf 685564-213566669889-99982898558821265432000015865535302--------------43455766675 Q gi|254780280|r 80 DQKSFT-LTNYHWVIDPEE-LISRMQFEDVLLINDFEAQALAICSLSCSNYVSIG--------------QFVEDNRSLFS 143 (348) Q Consensus 80 ~~~~~~-~~~~~~~~~~~~-l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg--------------~~~~~~~~~~~ 143 (348) ++.... .+++.|.+...+ +.+.++..+|.++||++|.+|+++.+.+++..++. +...+.+.+.. T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ND~~A~a~g~~~~~~nd~~~~~~~e~~~~~~~~~~~~~~~G~~~g~~ 182 (373) T 2q2r_A 103 GGAVGGPFNNLKGIARLSDYPKALFPPGHSAILNDLEAGGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQEPAGSVIGRG 182 (373) T ss_dssp TTTEECCCSSSBSCEEGGGSCTTTSCTTSEEEEEHHHHHHHHHHHHHHTTCHHHHEEEEECCTTTTTTCSSCTTSSCCSS T ss_pred CCEEEEEECCCCCCCCHHHHHHHHCCCCCCEECCHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCC T ss_conf 99789995167543221577998648865303123667740986770361666544321145554542200243455656 Q ss_pred CEEEECCCCEEEEEEEECCC--CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHH Q ss_conf 27993176202245431058--8630113567866667661023478999985318986487752222389999999874 Q gi|254780280|r 144 SRVIVGPGTGLGISSVIRAK--DSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIA 221 (348) Q Consensus 144 ~~~~ig~GtG~g~~~~~~~~--~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~ 221 (348) ..+++++|||+|.++++++. .|+++.++|+||+.+++....+ ......|.|+.++|+|+++||+||.++|+++... T Consensus 183 ~~~~i~~GTGlG~~~i~~g~~~~G~~~~agE~Gh~~~~~~~~~~--~~~~~~~~~~~~~~~E~~~Sg~gl~~~y~~l~~~ 260 (373) T 2q2r_A 183 RCLVLAPGTGLGSSLIYYNPPMNQHIVVPLELGSQTLPMRKDID--YIQTLHAELKLFPNYENMVSGAGLEFHYRQVVRG 260 (373) T ss_dssp CEEEEEESSSEEEEEEEECC---CEEEEEECGGGSBCCCSSCHH--HHHHHHHHHTSCCBHHHHSSHHHHHHHHHHHHTT T ss_pred CEEEEECCCCCCEEEEECCEECCCCCCCCCCCEEEEECCCCHHH--HHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHH T ss_conf 58999337876346898985157766667775135337986065--6665541278866366752577799999999752 Q ss_pred CCCCCCCCCCHHHH--HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCC-----HHHHHH Q ss_conf 08886436988899--88368957999999999999999999999748997389965677655677276-----489999 Q gi|254780280|r 222 DGFESNKVLSSKDI--VSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRN-----SSFRES 294 (348) Q Consensus 222 ~~~~~~~~~~~~~~--~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~-----~~f~~~ 294 (348) ... ..++.++ +++++|+.|++++++|+++||+++++++++++|+. ||++||++.+...++.. +.|++. T Consensus 261 ~~~----~~~~~~i~~~a~~gD~~A~~~~~~~~~~La~~l~~l~~~~~p~~-iVigGG~~~~~~~~~~~~~~~~~~~~~~ 335 (373) T 2q2r_A 261 SRP----PCSAGEIAKLASEGDANACKAMKKYHEYLMRVGSEASMALLPLT-IVLVGDNIVNNAFFYRNPQNLKEMHHEA 335 (373) T ss_dssp SSC----CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSE-EEECSHHHHHTHHHHHSHHHHHHHHHHH T ss_pred CCC----CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEEEEHHHCCCHHHHHHHHHHHHHHHH T ss_conf 032----21069999998659989999999999999999999999989698-9999783651613342499999999997 Q ss_pred HHHCCCHHHHHHHCCEEEE-ECCCCHHHHHHHHHHC Q ss_conf 8837983788973887999-5787227759998738 Q gi|254780280|r 295 FENKSPHKELMRQIPTYVI-TNPYIAIAGMVSYIKM 329 (348) Q Consensus 295 f~~~~~~~~~l~~ipv~~~-~~~~agl~GAa~~~r~ 329 (348) |..+.++.++++++|++.. +..+++|+||+.|+.+ T Consensus 336 ~~~~~~~~~~~~~~~i~~~~~~~n~~l~Ga~~~a~~ 371 (373) T 2q2r_A 336 LNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCGLD 371 (373) T ss_dssp TCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHHHH T ss_pred HHCCCCCCHHHHCCCEEEEECCCCCCHHHHHHHHHH T ss_conf 523456512432681699861789657989999864 |
>1z05_A Transcriptional regulator, ROK family; structural genomics, PSI, protein structure initiative; 2.00A {Vibrio cholerae o1 biovar eltor str} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 | Back alignment and structure |
---|
Probab=100.00 E-value=7.2e-39 Score=256.83 Aligned_cols=291 Identities=16% Similarity=0.181 Sum_probs=212.2 Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCC--C----CHHHHHHHHHHHCC--CCCCCEEEEEEEEEEECC Q ss_conf 667737999857511899998779980889997438873--5----88999999997223--456554699973044168 Q gi|254780280|r 10 PIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDY--E----NLEHAIQEVIYRKI--SIRLRSAFLAIATPIGDQ 81 (348) Q Consensus 10 ~~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~--~----~~~~~i~~~l~~~~--~~~~~~igi~v~Gpv~~~ 81 (348) |-...+|++|||+|+++++++|.. +++..+.+.++... + .+.+.+++++.+.. ..++.+|||++||+|+.. T Consensus 105 ~~~~~~iGIdig~~~i~~~l~dl~-G~il~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~gIgi~~pG~vd~~ 183 (429) T 1z05_A 105 NLGWQFLSMRLGRGYLTIALHELG-GEVLIDTKIDIHEIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSE 183 (429) T ss_dssp CTTEEEEEEEEETTEEEEEEEETT-SCEEEEEEEECCCCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEEETT T ss_pred CCEEEEEEEEECCCEEEEEEECCC-CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC T ss_conf 880499999989998999998499-8789999834887887899999999999999975766146579999627861688 Q ss_pred C--EEEECCCCCC-CCH-HHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEE Q ss_conf 5--5642135666-698-89999828985588212654320000158655353024345576667527993176202245 Q gi|254780280|r 82 K--SFTLTNYHWV-IDP-EELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGIS 157 (348) Q Consensus 82 ~--~~~~~~~~~~-~~~-~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~ 157 (348) . ....+++.|. ++. ..+.+.++ .||.++||++|.+++|.+++. ......++++..|+|+|.+ T Consensus 184 ~g~~~~~~~~~~~~~~l~~~l~~~~~-~pV~v~NDa~a~alaE~~~g~-------------~~~~~~~v~i~~g~GiG~g 249 (429) T 1z05_A 184 QGIVLQMPHYNVKNLALGPEIYKATG-LPVFVANDTRAWALAEKLFGH-------------SQDVDNSVLISIHHGLGAG 249 (429) T ss_dssp TTEEEECSSSBCSSBCHHHHHHHHHC-SCEEEEEHHHHHHHHHHHHST-------------TTTCSSEEEEEESSSEEEE T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHC-CCEEEECCCCCCCHHHHHCCC-------------CCCCCCCEEEEECCCCCCC T ss_conf 87462489888589845899999979-988994464521448776186-------------6688864157744787444 Q ss_pred EEECCC--CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCC---CCCCCH Q ss_conf 431058--863011356786666766102347899998531898648775222238999999987408886---436988 Q gi|254780280|r 158 SVIRAK--DSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFES---NKVLSS 232 (348) Q Consensus 158 ~~~~~~--~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~---~~~~~~ 232 (348) +++++. .|.+..++|+||+.+.+.+. .|.||+.+|+|+++|+++|.+.++.......... .+.+.. T Consensus 250 ii~~G~l~~G~~~~aGeiGh~~v~~~g~---------~c~cG~~gclE~~~S~~al~~~~~~~~~~~~~~~l~~~~~~~~ 320 (429) T 1z05_A 250 IVLDGRVLQGRHGNIGELGHIQIDPQGK---------RCHCGNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISI 320 (429) T ss_dssp EEETTEECCTTTTCTTBCTTSBCCTTCC---------BCTTSCBSBTHHHHSHHHHHHHHHHHHHTTCCCTTTTCSSCCH T ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCC---------CCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH T ss_conf 3579811006887552555478679997---------5768887860104049999999998761366432245333899 Q ss_pred HH--HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCE Q ss_conf 89--9883689579999999999999999999997489973899656776556772764899998837983788973887 Q gi|254780280|r 233 KD--IVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPT 310 (348) Q Consensus 233 ~~--~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv 310 (348) .+ .+++.+|+.|.+++++++++||.+++|++++++|+. |||||+++.....++ +.+++.+.++ .+..+.++++| T Consensus 321 ~~i~~~a~~gD~~a~~ii~~~~~~La~~i~nl~~~ldPe~-IVlgG~v~~~~~~l~--~~i~~~i~~~-~~~~~~~~~~I 396 (429) T 1z05_A 321 EDICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEK-ILIGGVINQAKSILY--PSIEQCIREQ-SLPVYHQDLKL 396 (429) T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSE-EEEESGGGGGHHHHH--HHHHHHHHHH-SCHHHHTTCEE T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECHHHHCHHHHH--HHHHHHHHHH-CCCCCCCCCEE T ss_conf 9999999839899999999999999999999999879898-999692574768899--9999999985-03125789889 Q ss_pred EEE-ECCCCHHHHHHHHHH Q ss_conf 999-578722775999873 Q gi|254780280|r 311 YVI-TNPYIAIAGMVSYIK 328 (348) Q Consensus 311 ~~~-~~~~agl~GAa~~~r 328 (348) ..+ .+++++++|||.+++ T Consensus 397 ~~s~l~~~a~l~GAAlla~ 415 (429) T 1z05_A 397 VESRFYKQATMPGAALIKQ 415 (429) T ss_dssp EECSCSSCTTHHHHHHHHH T ss_pred EECCCCCHHHHHHHHHHHH T ss_conf 9899798199999999999 |
>3eo3_A Bifunctional UDP-N-acetylglucosamine 2- epimerase/N-acetylmannosamine kinase; non-protein kinase, sialic acid biosynthesis; 2.84A {Homo sapiens} | Back alignment and structure |
---|
Probab=100.00 E-value=8.4e-39 Score=256.41 Aligned_cols=286 Identities=18% Similarity=0.146 Sum_probs=203.2 Q ss_pred CCCCEEEEEECCCCEEEEEEECCCCEEEEEEEEC-CCCCCCHH----HHHHHHHHHC--CCCCCCEEEEEEEEEEECCCE Q ss_conf 6773799985751189999877998088999743-88735889----9999999722--345655469997304416855 Q gi|254780280|r 11 IAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQ-TSDYENLE----HAIQEVIYRK--ISIRLRSAFLAIATPIGDQKS 83 (348) Q Consensus 11 ~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~-t~~~~~~~----~~i~~~l~~~--~~~~~~~igi~v~Gpv~~~~~ 83 (348) -+|+.|+|||||||+|++++|.. ++++.+.+.+ +..++... +.+.+++.+. ...++.++|||+||+|+.... T Consensus 18 ~~~~~lGIDiGGT~~~~al~d~~-G~vl~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~~igia~pG~vd~~~g 96 (333) T 3eo3_A 18 GTLSALAVDLGGTNLRVAIVSMK-GEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREG 96 (333) T ss_dssp -CCEEEEEEECSSEEEEEEEETT-SCEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEC--------- T ss_pred CCCEEEEEEECCCEEEEEEECCC-CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC T ss_conf 88549999977113999999599-97999999689999789999999999999998612478667999942874656658 Q ss_pred --EEECCC--CCC-CC-HHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEE Q ss_conf --642135--666-69-889999828985588212654320000158655353024345576667527993176202245 Q gi|254780280|r 84 --FTLTNY--HWV-ID-PEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGIS 157 (348) Q Consensus 84 --~~~~~~--~~~-~~-~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~ 157 (348) ...+++ .|. ++ ...+.+.++ .||.++||+++.+++|.+++. .......+++..|+|+|.+ T Consensus 97 ~v~~s~~~~~~~~~~~l~~~l~~~~~-~pv~v~ND~~a~a~aE~~~g~-------------~~~~~~~~~i~~g~Gig~~ 162 (333) T 3eo3_A 97 IVLHSTKLIQEWNSVDLRTPLSDTLH-LPVWVDNDGNCAALAERKFGQ-------------GKGLENFVTLITGTGIGGG 162 (333) T ss_dssp ---------------CCHHHHHHHHC-SCEEEECHHHHHHHHHHHTST-------------TTTCSSEEEEEESSSEEEE T ss_pred CEECCCCCCCCCCCCCHHHHHHHHCC-CCEEECCCCCCCHHHHHHCCC-------------CCCCCCCEEEEECCCCCEE T ss_conf 24303555420137755566653239-837664653200168876176-------------6689873289971566303 Q ss_pred EEECC--CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCC-------CCC Q ss_conf 43105--886301135678666676610234789999853189864877522223899999998740888-------643 Q gi|254780280|r 158 SVIRA--KDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFE-------SNK 228 (348) Q Consensus 158 ~~~~~--~~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~-------~~~ 228 (348) ...++ ..|.+..++|+||+.+.+... .|.|++++|+|+++|+++|.++|+.+....... ... T Consensus 163 ~~~~g~~~~G~~~~~ge~Gh~~v~~~~~---------~~~~g~~g~le~~~S~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 233 (333) T 3eo3_A 163 IIHQHELIHGSSFCAAELGHLVVSLDGP---------DCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDE 233 (333) T ss_dssp EEETTEECCCTTSCCCCGGGCBCCSSCC---------BCTTSCBSBHHHHHSHHHHHHHHHHHHHTTCSCCTTCCCCSSC T ss_pred EEEECCEEECCCCCCCEEEEEEECCCCC---------CCCCCCCCCHHHEECHHHHHHHHHHHHCCCCCHHHHCCCCCCC T ss_conf 6750641307996444126645168986---------5535678970014219999999998626662011100235432 Q ss_pred CCCH--HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHH Q ss_conf 6988--89988368957999999999999999999999748997389965677655677276489999883798378897 Q gi|254780280|r 229 VLSS--KDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMR 306 (348) Q Consensus 229 ~~~~--~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~ 306 (348) .... ...+++.+|+.|.+++++++++|+..++|++++|+|+ .|||||+++..+.+.+.+ . ++.+ .+. ..+ T Consensus 234 ~~~~~~i~~~a~~GD~~a~~i~~~~~~~la~~i~nli~~l~p~-~IvlgG~i~~~~~~~l~~-~-l~~~----~~~-~~~ 305 (333) T 3eo3_A 234 AVGALHLIQAAKLGNAKAQSILRTAGTALGLGVVNILHTMNPS-LVILSGVLASHYIHIVKD-V-IRQQ----ALS-SVQ 305 (333) T ss_dssp CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCS-EEEEESTTHHHHHHHHHH-H-HHHH----SCG-GGT T ss_pred CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-EEEEECHHHHHHHHHHHH-H-HHHH----CCC-CCC T ss_conf 2557887887741778899999999999999999999987979-899949788707999999-9-9986----242-458 Q ss_pred HCCEEEEECCCCHHHHHHHHHH Q ss_conf 3887999578722775999873 Q gi|254780280|r 307 QIPTYVITNPYIAIAGMVSYIK 328 (348) Q Consensus 307 ~ipv~~~~~~~agl~GAa~~~r 328 (348) ++||..+.-.|++++|||.++- T Consensus 306 ~~~i~~s~l~da~~~GAA~lal 327 (333) T 3eo3_A 306 DVDVVVSDLVDPALLGAASMVL 327 (333) T ss_dssp TCEEEECCCSSHHHHHHHHHHH T ss_pred CCEEEECCCCCHHHHHHHHHHH T ss_conf 9859956789677799999999 |
>2gup_A ROK family protein; sugar kinase, APC80695, sucrose, structural genomics, PSI, protein structure initiative; HET: SUC; 2.01A {Streptococcus pneumoniae TIGR4} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
---|
Probab=100.00 E-value=1.4e-39 Score=261.31 Aligned_cols=278 Identities=17% Similarity=0.130 Sum_probs=193.6 Q ss_pred CCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCC--EEEECC Q ss_conf 677379998575118999987799808899974388735889999999972234565546999730441685--564213 Q gi|254780280|r 11 IAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQK--SFTLTN 88 (348) Q Consensus 11 ~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~--~~~~~~ 88 (348) .+|.+|+|||||||||++++|.. +++..+.+++|. ++++++++.+.+.....++.++||++||||+... ....++ T Consensus 2 ~~~~~~~iDiGGT~ir~~l~d~~-g~ii~~~~~~t~--~~~~~~~~~i~~~~~~~~i~~Igia~pG~vd~~~g~i~~~~~ 78 (292) T 2gup_A 2 NAMTIATIDIGGTGIKFASLTPD-GKILDKTSISTP--ENLEDLLAWLDQRLSEQDYSGIAMSVPGAVNQETGVIDGFSA 78 (292) T ss_dssp --CCEEEEEEETTEEEEEEECTT-CCEEEEEEECCC--SSHHHHHHHHHHHHTTSCCSEEEEEESSEECTTTCBEESCCS T ss_pred CCCEEEEEEECCHHEEEEEECCC-CCEEEEEEEECC--CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC T ss_conf 98889999977024699999189-969999997287--659999999999866527867999606752156672024333 Q ss_pred CCCC--CCHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCC--C Q ss_conf 5666--69889999828985588212654320000158655353024345576667527993176202245431058--8 Q gi|254780280|r 89 YHWV--IDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAK--D 164 (348) Q Consensus 89 ~~~~--~~~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~--~ 164 (348) ..|. ++..++.+.++ .||.++||++|.+++|...+ . ....++++..|+|+|.+++.++. . T Consensus 79 ~~~~~~~~~~~~~~~~~-~pv~~~ND~~a~a~aE~~~~-------------~--~~~~~~~v~ig~GiG~g~~~~g~~~~ 142 (292) T 2gup_A 79 VPYIHGFSWYEALSSYQ-LPVHLENDANCVGLSELLAH-------------P--ELENAACVVIGTGIGGAMIINGRLHR 142 (292) T ss_dssp SGGGSSSBHHHHTGGGC-CCEEEEEHHHHHHHHHHHHC-------------T--TCSSEEEEEESSSEEEEEEETTEEEC T ss_pred CCCCCCCCHHHHHHHCC-CCEEEECHHHHHHHHHHHHC-------------C--CCCCEEEEEECCCCCCCCCCCCEEEC T ss_conf 33335732689998619-94998216789989987626-------------6--53421478862654430022220341 Q ss_pred CCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHCCCH Q ss_conf 6301135678666676610234789999853189864877522223899999998740888643698889--98836895 Q gi|254780280|r 165 SWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKD--IVSKSEDP 242 (348) Q Consensus 165 g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~D~ 242 (348) |.+..++|+||+.+. |.|+..+|+|+++|..++.+.+..... . +.+...+ .+++.+|+ T Consensus 143 G~~~~age~Gh~~~~--------------~~~~~~~~~e~~~s~~~l~~~~~~~~~---~---~~~~~~~i~~~a~~~d~ 202 (292) T 2gup_A 143 GRHGLGGEFGYMTTL--------------APAEKLNNWSQLASTGNMVRYVIEKSG---H---TDWDGRKIYQEAAAGNI 202 (292) T ss_dssp CTTSCTTCGGGCBSS--------------CCSSSCCBHHHHHSHHHHHHHHHHHHS---S---CCCCHHHHHHHHHTTCH T ss_pred CCCCCCCCCEEEEEC--------------CCCCCCCCHHHHHCCCHHHHHHHHHCC---C---CCHHHHHHHHHHHCCCH T ss_conf 788766411348952--------------377765534445155078999998616---7---53036789999973882 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCC-CHHHHHHHCCEEEE-ECCCCHH Q ss_conf 799999999999999999999974899738996567765567727648999988379-83788973887999-5787227 Q gi|254780280|r 243 IALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKS-PHKELMRQIPTYVI-TNPYIAI 320 (348) Q Consensus 243 ~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~-~~~~~l~~ipv~~~-~~~~agl 320 (348) .+.++++.++++|+..++|++++|+|+ .|||||++++. .+++. .+.+.+.+.. .+........|..+ .++++++ T Consensus 203 ~~~~~~~~~~~~la~~i~nl~~~l~p~-~IvlgG~i~~~-~~~~~--~l~~~l~~~~~~~~~~~~~~~i~~s~~~~~a~l 278 (292) T 2gup_A 203 LCQEAIERMNRNLAQGLLNIQYLIDPG-VISLGGSISQN-PDFIQ--GVKKAVEDFVDAYEEYTVAPVIQACTYHADANL 278 (292) T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCS-EEEEESGGGGC-HHHHH--HHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHH T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCC-EEEEECHHHCC-HHHHH--HHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHH T ss_conf 667999999999999998688842899-89996814343-88999--999999999864312478988997886982999 Q ss_pred HHHHHHHHCCC Q ss_conf 75999873800 Q gi|254780280|r 321 AGMVSYIKMTD 331 (348) Q Consensus 321 ~GAa~~~r~~~ 331 (348) +|||+++.|+. T Consensus 279 ~GAa~~~l~~~ 289 (292) T 2gup_A 279 YGALVNWLQEE 289 (292) T ss_dssp HHHHHHHHHHT T ss_pred HHHHHHHHHHH T ss_conf 99999999984 |
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis V583} | Back alignment and structure |
---|
Probab=100.00 E-value=4.4e-38 Score=252.00 Aligned_cols=297 Identities=19% Similarity=0.180 Sum_probs=213.4 Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCC-------HHHHHHHHHHHCC--CCCCCEEEEEEEEEEEC Q ss_conf 66773799985751189999877998088999743887358-------8999999997223--45655469997304416 Q gi|254780280|r 10 PIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYEN-------LEHAIQEVIYRKI--SIRLRSAFLAIATPIGD 80 (348) Q Consensus 10 ~~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~-------~~~~i~~~l~~~~--~~~~~~igi~v~Gpv~~ 80 (348) -|..+||+||+||||++++++|. .+++....+.++...++ +.+.+.+++++.. ..++.++|+++||+++. T Consensus 3 ~m~~~vLgiD~GgT~~~~~l~d~-~G~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~~igi~~~G~vd~ 81 (326) T 2qm1_A 3 AMDKKIIGIDLGGTTIKFAILTT-DGVVQQKWSIETNILEDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGTPGSVDI 81 (326) T ss_dssp GGGCEEEEEEECSSEEEEEEEET-TCCEEEEEEEECCCTTTTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSEEET T ss_pred CCCCEEEEEEECCCEEEEEEECC-CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEC T ss_conf 78985999998734289999939-99799999971798889899999999999999997157656713785224330506 Q ss_pred CC--EEEECCCCCCCC--HHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEE Q ss_conf 85--564213566669--88999982898558821265432000015865535302434557666752799317620224 Q gi|254780280|r 81 QK--SFTLTNYHWVID--PEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGI 156 (348) Q Consensus 81 ~~--~~~~~~~~~~~~--~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~ 156 (348) .. ....+++.|... ..+........||.++||++|.+++|.+++ .......++++..|||+|. T Consensus 82 ~~~~i~~~~~l~~~~~~~l~~~l~~~~~~~v~v~ND~~a~a~ae~~~g-------------~~~~~~~~~~i~~gtGig~ 148 (326) T 2qm1_A 82 EKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERWKG-------------AGENNPDVIFITLGTGVGG 148 (326) T ss_dssp TTTEEECBGGGTBCSCBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHS-------------TTTTCSCEEEEEESSSEEE T ss_pred CCCCEEEECCCCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHC-------------CCCCCCCEEEEECCCCEEE T ss_conf 668076303567444433899999987998898565889999999828-------------8889997789962786388 Q ss_pred EEEECC--CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCC------- Q ss_conf 543105--88630113567866667661023478999985318986487752222389999999874088864------- Q gi|254780280|r 157 SSVIRA--KDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESN------- 227 (348) Q Consensus 157 ~~~~~~--~~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~------- 227 (348) +++.++ ..|.+..++|+||+.+.+... .|.|+..+|+|.++|++++.+.++.+......... T Consensus 149 ~~i~~g~~~~g~~g~~~~~G~~~~~~~g~---------~~~~~~~g~~e~~~S~~~l~~~~~~~~~~~~~~~~~~~~~~~ 219 (326) T 2qm1_A 149 GIVAAGKLLHGVAGCAGEVGHVTVDPNGF---------DCTCGKRGCLETVSSATGVVRVARHLSEEFAGDSELKQAIDD 219 (326) T ss_dssp EEEETTEECCCSSSCTTCGGGSBSCTTSC---------BCTTSSBCBTHHHHSHHHHHHHHHHHTTTCCSCCHHHHHHHH T ss_pred EEEECCEECCCCCCCCCCCCCCEECCCCC---------CCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHCC T ss_conf 99989861117998755024522368876---------554556774998726799999999874024762567764213 Q ss_pred -CCCC--HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHH Q ss_conf -3698--8899883689579999999999999999999997489973899656776556772764899998837983788 Q gi|254780280|r 228 -KVLS--SKDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKEL 304 (348) Q Consensus 228 -~~~~--~~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~ 304 (348) .... ....+++.+|+.|.+++++++++|+..++++++.++|+. |||+|++......++ +.+++.+.+. .+... T Consensus 220 ~~~~~~~~~~~~a~~gD~~a~~i~~~~~~~l~~~i~~l~~~l~p~~-vvl~G~~~~~~~~l~--~~l~~~~~~~-~~~~~ 295 (326) T 2qm1_A 220 GQDVSSKDVFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLNPDS-VVIGGGVSAAGEFLR--SRVEKYFQEF-TFPQV 295 (326) T ss_dssp TCCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSE-EEEEESGGGGTHHHH--HHHHHHHHHT-SCHHH T ss_pred CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECHHHHCCHHHH--HHHHHHHHHH-CCCCC T ss_conf 3200267789998717766899999988879999999999919998-999693672707899--9999999973-24134 Q ss_pred HHHCCEEEE-ECCCCHHHHHHHHHHCCCCC Q ss_conf 973887999-57872277599987380012 Q gi|254780280|r 305 MRQIPTYVI-TNPYIAIAGMVSYIKMTDCF 333 (348) Q Consensus 305 l~~ipv~~~-~~~~agl~GAa~~~r~~~~~ 333 (348) ...++|..+ .+++++++|||.++.+..++ T Consensus 296 ~~~~~i~~~~~~~~~~~~GAa~lal~~~~~ 325 (326) T 2qm1_A 296 RNSTKIKLAELGNEAGVIGAASLALQFSKE 325 (326) T ss_dssp HTTSEEEECSSGGGHHHHHHHHHGGGGCC- T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHCC T ss_conf 789879988879838899999999998655 |
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
---|
Probab=100.00 E-value=6.4e-38 Score=250.99 Aligned_cols=278 Identities=16% Similarity=0.134 Sum_probs=194.9 Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCC---HHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEEC-- Q ss_conf 73799985751189999877998088999743887358---8999999997223456554699973044168556421-- Q gi|254780280|r 13 FPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYEN---LEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLT-- 87 (348) Q Consensus 13 ~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~---~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~-- 87 (348) |.+|+||+||||+|++++|. .+++....+.|+...+. +.+.|.+++.+. ..++.++||++|||+++....... T Consensus 1 m~~igiD~GGT~~~~~l~d~-~G~il~~~~~~~~~~~~~~~i~~~i~~~~~~~-~~~~~~igIa~~G~v~~~~~~~~~~~ 78 (289) T 2aa4_A 1 MTTLAIDIGGTKLAAALIGA-DGQIRDRRELPTPASQTPEALRDALSALVSPL-QAHAQRVAIASTGIIRDGSLLALNPH 78 (289) T ss_dssp CCEEEEEECSSEEEEEEECT-TCCEEEEEEEECCSSCCHHHHHHHHHHHHTTT-GGGCSEEEEEESSEEETTEEECSSGG T ss_pred CCEEEEEECCCCEEEEEECC-CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHH-HHHCCEEEEEECCCEEECCEEEECCC T ss_conf 96999998800389999979-99699999997898878999999999999998-86558469970662121110474253 Q ss_pred CC-CCC-CCHHH-HHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECC-- Q ss_conf 35-666-69889-99982898558821265432000015865535302434557666752799317620224543105-- Q gi|254780280|r 88 NY-HWV-IDPEE-LISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRA-- 162 (348) Q Consensus 88 ~~-~~~-~~~~~-l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~-- 162 (348) +. .|. .+... +.+.++ .||.++||++|.++++....+. . ...++++..|.++|.+...++ T Consensus 79 ~~~~~~~~~l~~~l~~~~~-~pv~v~nd~~a~~~~e~~~~~~------------~--~~~~~~~~~~~~~g~~~~~~g~~ 143 (289) T 2aa4_A 79 NLGGLLHFPLVKTLEQLTN-LPTIAINDAQAAAWAEFQALDG------------D--ITDMVFITVSTGVGGGVVSGCKL 143 (289) T ss_dssp GGGGGTTCCHHHHHHHHHC-SCEEEEEHHHHHHHHHHHTSCT------------T--CCCEEEEEESSSEEEEEEETTEE T ss_pred CCCHHCCCCHHHHHHHHHC-CCEEEECCHHHHHHHHHHHHCC------------C--CCEEEEEEECCCCCCEEEEECCE T ss_conf 4211149946999999879-9999936588988888875358------------8--62699999568876247750644 Q ss_pred CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCH Q ss_conf 88630113567866667661023478999985318986487752222389999999874088864369888998836895 Q gi|254780280|r 163 KDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSEDP 242 (348) Q Consensus 163 ~~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~~~~~~D~ 242 (348) ..|.+..++|+||+.+.+... .|.|++.+|+|+++|+++|.+.|+... ..........+++++|+ T Consensus 144 ~~g~~~~~ge~g~~~~~~~~~---------~~~~g~~g~le~~~S~~~l~~~~~~~~------~~~~~~~l~~~~~~gd~ 208 (289) T 2aa4_A 144 LTGPGGLAGHIGHTLADPHGP---------VCGCGRTGCVEAIASGRGIAAAAQGEL------AGADAKTIFTRAGQGDE 208 (289) T ss_dssp ECCTTSCCCCGGGSBSCTTSC---------BCTTSCBSBHHHHHSHHHHHHTCCGGG------TTCCHHHHHHHHHTTCH T ss_pred ECCCCCCCCEEEEEEECCCCC---------CCCCCCCCCCHHCCCHHHHHHHHHHHH------CCCCHHHHHHHHHCCCH T ss_conf 415765454546446558998---------577888787000133999999985443------25740567888762787 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEE-ECCCCHHH Q ss_conf 79999999999999999999997489973899656776556772764899998837983788973887999-57872277 Q gi|254780280|r 243 IALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVI-TNPYIAIA 321 (348) Q Consensus 243 ~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~-~~~~agl~ 321 (348) .|.+++++++++|+..+.+++++++|+ .|||+|+++.. ..++ +.+.+.+..+ . ...+++|..+ .+++++++ T Consensus 209 ~a~~i~~~~~~~la~~i~~l~~~~~p~-~Ivl~G~i~~~-~~~~--~~~~~~l~~~-~---~~~~~~i~~s~~~~~a~~i 280 (289) T 2aa4_A 209 QAQQLIHRSARTLARLIADIKATTDCQ-CVVVGGSVGLA-EGYL--ALVETYLAQE-P---AAFHVDLLAAHYRHDAGLL 280 (289) T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCS-EEEEEHHHHTS-TTHH--HHHHHHHTTS-C---GGGCCEEEECSCSSCHHHH T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCC-EEEEECHHHCC-HHHH--HHHHHHHHHC-C---CCCCCEEEECCCCCCHHHH T ss_conf 777779999999999999999986989-89997857626-5589--9999999844-5---6789859955889938899 Q ss_pred HHHHHHHCC Q ss_conf 599987380 Q gi|254780280|r 322 GMVSYIKMT 330 (348) Q Consensus 322 GAa~~~r~~ 330 (348) |||.+||+. T Consensus 281 GAa~lA~~~ 289 (289) T 2aa4_A 281 GAALLAQGE 289 (289) T ss_dssp HHHHHHHCC T ss_pred HHHHHHCCC T ss_conf 999987679 |
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis} | Back alignment and structure |
---|
Probab=100.00 E-value=1.6e-38 Score=254.64 Aligned_cols=293 Identities=14% Similarity=0.097 Sum_probs=198.8 Q ss_pred CCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHH------HCCCCCCCEEEEEEEEEEECCC--E Q ss_conf 7737999857511899998779980889997438873588999999997------2234565546999730441685--5 Q gi|254780280|r 12 AFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIY------RKISIRLRSAFLAIATPIGDQK--S 83 (348) Q Consensus 12 ~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~------~~~~~~~~~igi~v~Gpv~~~~--~ 83 (348) ...+|+|||||||++++++|. ++++....++|+.. ++.++.++++++ .....++.++||++||||+... . T Consensus 8 ~~~vlgiDIGGT~i~~al~d~-~g~i~~~~~~pt~~-~~~~~~l~~i~~~i~~~~~~~~~~i~gIGia~pG~vd~~~G~v 85 (366) T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQG-GKEIADPVVLPACA-DCLDKCLGNLVEGFKAIQAGLPEAPVAISFAFPGPADYQAGII 85 (366) T ss_dssp CCEEEEEECSSSEEEEEEEET-TEECSCCEEEECCT-TCHHHHHHHHHHHHHHHHTTCSSCCCEEEEECCSSEETTTTEE T ss_pred CCEEEEEEECCCEEEEEEEEC-CCCEEEEEEECCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEECCCCEE T ss_conf 988999998731499999908-99599999975898-8999999999999999985478987679999267686899989 Q ss_pred EEECCCCC-C--CCHHH-HHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEE Q ss_conf 64213566-6--69889-99982898558821265432000015865535302434557666752799317620224543 Q gi|254780280|r 84 FTLTNYHW-V--IDPEE-LISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSV 159 (348) Q Consensus 84 ~~~~~~~~-~--~~~~~-l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~ 159 (348) ...+|++| . ++..+ +.+.++ .||.++||++|.+++|.++.............+.+..+..+++++.|||+|.+++ T Consensus 86 ~~~~nl~~~~~~~~l~~~l~~~~g-~pV~i~NDa~aaalgE~~~~~~~~~~~~~~~~G~~~~~~~~~~itiGtGiG~giv 164 (366) T 3mcp_A 86 GDLPNFPSFRGGVALGPFLEDIFG-IPVFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTGFGAGVV 164 (366) T ss_dssp CCCTTCGGGTTCBCHHHHHHHHHC-SCEEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSSEEEEEE T ss_pred EECCCCHHHHCCCCHHHHHHHHHC-CCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEE T ss_conf 827873375459748999999878-8868617488999999874445321100013566667684899986888569999 Q ss_pred ECC--CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH- Q ss_conf 105--88630113567866667661023478999985318986487752222389999999874088864369888998- Q gi|254780280|r 160 IRA--KDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIV- 236 (348) Q Consensus 160 ~~~--~~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~~- 236 (348) +++ ..|.+..+||+||+. +.|+..+|+|+++|+++|.+.|+.+........... ..+++ T Consensus 165 ~~G~l~~G~~g~aGeiGh~~----------------~~~~~~gclE~~~S~~al~~~~~~~~~~~~~~~~~~--i~~l~~ 226 (366) T 3mcp_A 165 IDGELLRGDNAAGGYVWCLR----------------NKKYPEYIVEESVSIRAVMRVYAERSGDAGARTPKE--IFEIAE 226 (366) T ss_dssp ETTEECCCTTSCTTCCTTSB----------------CSSCTTSBGGGTSSHHHHHHHHHHHSSCCSCCCHHH--HHHHHH T ss_pred ECCEEEECCCCCCCEEEEEE----------------CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHH--HHHHHH T ss_conf 99998547998672588886----------------167899762342328899999998508755688778--999999 Q ss_pred -HHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCC-CHHH-HHHHCCEEE Q ss_conf -8368-95799999999999999999999974899738996567765567727648999988379-8378-897388799 Q gi|254780280|r 237 -SKSE-DPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKS-PHKE-LMRQIPTYV 312 (348) Q Consensus 237 -~~~~-D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~-~~~~-~l~~ipv~~ 312 (348) ++.+ |+.|++++++++++||.+++|++++++ +. |||||||+.+...++ +.+++++.++- .++. .+..++..+ T Consensus 227 ~~~~gd~~~A~~i~~~~~~~Lg~~la~l~~l~d-~~-IVigGgi~~~~~~~l--p~l~~~l~~~~~~~~~~~~~~~~~~~ 302 (366) T 3mcp_A 227 GIRPGNREAAIAAFEELGEMAGDALASAITLID-GL-IVIGGGLSGASKYIL--PVLLKEMNAQTGMMDGARFGRLQKEV 302 (366) T ss_dssp TSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHC-SE-EEEESGGGGGHHHHH--HHHHHHHHHHTTCC--------CCEE T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CE-EEEECHHHCCHHHHH--HHHHHHHHHHCCCCCCCCCCCCCCCC T ss_conf 987099299999999999999999999999759-97-999754878807789--99999999853667766543344444 Q ss_pred E-ECCCCH----HHHHHHHHHC Q ss_conf 9-578722----7759998738 Q gi|254780280|r 313 I-TNPYIA----IAGMVSYIKM 329 (348) Q Consensus 313 ~-~~~~ag----l~GAa~~~r~ 329 (348) . ..++.+ ..|||.++.- T Consensus 303 ~~~~~~~~~~~~a~gaa~~v~~ 324 (366) T 3mcp_A 303 YDLDEEKSFAGFARGEAVEVLV 324 (366) T ss_dssp EETTSHHHHHHHHHTTCEEEEC T ss_pred CCCCCHHHHHHHHCCCCEEEEC T ss_conf 0245653444443367519961 |
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding protein, helix-turn-helix, phosphotransferase system, metalloprotein; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A | Back alignment and structure |
---|
Probab=100.00 E-value=9e-36 Score=237.70 Aligned_cols=290 Identities=14% Similarity=0.088 Sum_probs=204.9 Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECC--CCCCCHH----HHHHHHHHHCC--CCCCCEEEEEEEEEEECC Q ss_conf 667737999857511899998779980889997438--8735889----99999997223--456554699973044168 Q gi|254780280|r 10 PIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQT--SDYENLE----HAIQEVIYRKI--SIRLRSAFLAIATPIGDQ 81 (348) Q Consensus 10 ~~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t--~~~~~~~----~~i~~~l~~~~--~~~~~~igi~v~Gpv~~~ 81 (348) |....++++|||+|+++++++|.. +++....+.++ .+.+.+. +.+.+++.+.. ..++.++||++||+|+.. T Consensus 82 ~~~~~~igv~i~~~~i~~~l~dl~-g~ii~~~~~~~~~~~~~~~l~~i~~~i~~~~~~~~~~~~~i~gigia~pG~vd~~ 160 (406) T 1z6r_A 82 TEAWHYLSLRISRGEIFLALRDLS-SKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTE 160 (406) T ss_dssp CTTCEEEEEEEETTEEEEEEEETT-CCEEEEEEEECCSSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEESSEEETT T ss_pred CCCCEEEEEEECCCEEEEEEECCC-CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCC T ss_conf 886689999988988999998699-9889889984367986999999999999999965775356469985125787788 Q ss_pred CEEE--ECCC-CCC-CCHHH-HHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEE Q ss_conf 5564--2135-666-69889-99982898558821265432000015865535302434557666752799317620224 Q gi|254780280|r 82 KSFT--LTNY-HWV-IDPEE-LISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGI 156 (348) Q Consensus 82 ~~~~--~~~~-~~~-~~~~~-l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~ 156 (348) .... .++. .|. ++..+ +.+.++ .||.++||++|.+++|.+++. ......++++..|+|+|. T Consensus 161 ~g~v~~~~~~~~~~~~~l~~~l~~~~~-~pv~v~ND~~a~a~aE~~~g~-------------~~~~~~~~~i~~g~GiG~ 226 (406) T 1z6r_A 161 NGIVHRMPFYEDVKEMPLGEALEQHTG-VPVYIQHDISAWTMAEALFGA-------------SRGARDVIQVVIDHNVGA 226 (406) T ss_dssp TTEEEECTTCTTCSSBCHHHHHHHHHS-SCEEEEEHHHHHHHHHHHHST-------------TTTCSSEEEEEESSSEEE T ss_pred CCEEECCCCCCCCCCCCHHHHHHHHHC-CCEEECCCHHHHHHHHHHHCC-------------CCCCCCEEEEEECCCCCE T ss_conf 888972788766468857999999878-884445625689999998488-------------778876023320368823 Q ss_pred EEEECC--CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCC--CCCCCH Q ss_conf 543105--8863011356786666766102347899998531898648775222238999999987408886--436988 Q gi|254780280|r 157 SSVIRA--KDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFES--NKVLSS 232 (348) Q Consensus 157 ~~~~~~--~~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~--~~~~~~ 232 (348) ++++++ ..|.+..++|+||+.+.|... .|.||+.+|+|+++|.++|.+.|........... ...... T Consensus 227 gii~~g~~~~G~~g~ageiGh~~v~~~g~---------~c~cG~~gclE~~~s~~al~~~~~~~~~~~~~~~l~~~~~~~ 297 (406) T 1z6r_A 227 GVITDGHLLHAGSSSLVEIGHTQVDPYGK---------RCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTV 297 (406) T ss_dssp EEEETTEETTTTSSCCBCGGGSBSCTTSC---------BCTTSCBSBTHHHHSHHHHHHHHHHHHTTCTTCGGGSSCCCH T ss_pred EEEECCEEEECCCCCCCEECCEEECCCCC---------CCCCCCCCCHHHEECHHHHHHHHHHHHCCCCCHHHCCCCCCH T ss_conf 68789947767888642312316668887---------467888773153233999999999863145302321555667 Q ss_pred HH--HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCE Q ss_conf 89--9883689579999999999999999999997489973899656776556772764899998837983788973887 Q gi|254780280|r 233 KD--IVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPT 310 (348) Q Consensus 233 ~~--~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv 310 (348) .+ .+++.+|+.|.+++++++.+||.+++|++++|+|+. |||||+++.....++ +.+++.+.++ .+..+.+.++| T Consensus 298 ~~l~~~~~~gd~~a~~i~~~~~~~l~~~l~nl~~~ldP~~-IvlgG~~~~~~~~~~--~~l~~~i~~~-~~~~~~~~~~i 373 (406) T 1z6r_A 298 DSLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQK-ILIGSPLSKAADILF--PVISDSIRQQ-ALPAYSQHISV 373 (406) T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSE-EEEESGGGGGHHHHH--HHHHHHHHHH-SCHHHHTTCEE T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECHHHHCHHHHH--HHHHHHHHHH-CCCCCCCCCEE T ss_conf 9999999869998999999999999999999999879898-999794783738899--9999999985-24024789779 Q ss_pred EEE-ECCCCHHHHHHHHH Q ss_conf 999-57872277599987 Q gi|254780280|r 311 YVI-TNPYIAIAGMVSYI 327 (348) Q Consensus 311 ~~~-~~~~agl~GAa~~~ 327 (348) ..+ ..++++++|||.+. T Consensus 374 ~~s~~~~~a~~~GAAll~ 391 (406) T 1z6r_A 374 ESTQFSNQGTMAGAALVK 391 (406) T ss_dssp EECSCCCCTTTTHHHHHH T ss_pred EECCCCCHHHHHHHHHHH T ss_conf 989979819999999999 |
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center for structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 | Back alignment and structure |
---|
Probab=100.00 E-value=3.7e-35 Score=233.92 Aligned_cols=273 Identities=13% Similarity=0.078 Sum_probs=194.3 Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCC---HHHHHHHHH----HH--CCCCCCCEEEEEEEEEEEC Q ss_conf 66773799985751189999877998088999743887358---899999999----72--2345655469997304416 Q gi|254780280|r 10 PIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYEN---LEHAIQEVI----YR--KISIRLRSAFLAIATPIGD 80 (348) Q Consensus 10 ~~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~---~~~~i~~~l----~~--~~~~~~~~igi~v~Gpv~~ 80 (348) |....+|+||||+|+++++++|.. +++....+.++....+ +.+.+.+.+ .. ....++.++||++||+|+. T Consensus 84 ~~~~~~igidig~~~i~~~l~d~~-g~vi~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gIgia~pG~vd~ 162 (380) T 2hoe_A 84 PNCAYVLGIEVTRDEIAACLIDAS-MNILAHEAHPLPSQSDREETLNVMYRIIDRAKDMMEKLGSKLSALTVAAPGPIDT 162 (380) T ss_dssp GGGCEEEEEEECSSEEEEEEEETT-CCEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEESSCEET T ss_pred CCCCEEEEEEECCCEEEEEEECCC-CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEC T ss_conf 980789999999998999999499-9899999875798888899999999999999998542178646999996864607 Q ss_pred CC--EEEECCCCCC-CCHHH-HHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEE Q ss_conf 85--5642135666-69889-99982898558821265432000015865535302434557666752799317620224 Q gi|254780280|r 81 QK--SFTLTNYHWV-IDPEE-LISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGI 156 (348) Q Consensus 81 ~~--~~~~~~~~~~-~~~~~-l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~ 156 (348) .. ....++..|. ++..+ +.+.++ .||.++||+++.+++|.+++ . ....++++..|+|+|. T Consensus 163 ~~g~v~~~~~~~w~~~~l~~~l~~~~~-~pv~v~NDa~~~alaE~~~g-------------~--~~~~~~~i~~g~GiG~ 226 (380) T 2hoe_A 163 ERGIIIDPRNFPLSQIPLANLLKEKYG-IEVWVENDADMGAVGEKWYT-------------K--RDDSFAWILTGKGIGA 226 (380) T ss_dssp TTTEECCCSSCTTBTSCHHHHHHHHHC-SEEEEEEHHHHHHHHHHHHT-------------T--CCSCEEEEEESSSCEE T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHC-CCEEEEECCCHHHHHHHHHC-------------C--CCCEEEEEEECCCCCC T ss_conf 857594357888433547999999879-98899827454899998743-------------5--8824999995378850 Q ss_pred EEEECCC--CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHH Q ss_conf 5431058--86301135678666676610234789999853189864877522223899999998740888643698889 Q gi|254780280|r 157 SSVIRAK--DSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKD 234 (348) Q Consensus 157 ~~~~~~~--~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~ 234 (348) ++++++. .|.+..+||+||+++ |.|+..+|+|+++|.+++.+.+.... ..... T Consensus 227 gii~~G~l~~G~~g~aGEiGh~~v---------------~~~~~~~c~e~~~s~~~i~~~~~~~~----------~~~l~ 281 (380) T 2hoe_A 227 GIIIDGELYRGENGYAGEIGYTRV---------------FNGNEYVFLEDVCNENVVLKHVLSMG----------FSSLA 281 (380) T ss_dssp EEEETTEECCCSSSCCCCGGGCEE---------------ECSSSEEEHHHHHCHHHHHHHHHHHC----------CC-TT T ss_pred EEEECCEEECCCCCCCCEEEEEEE---------------EECCCCCHHHHHCHHHHHHHHHHHCC----------CCHHH T ss_conf 598899482488775524567999---------------61465345653430999999998568----------53036 Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEE- Q ss_conf 9883689579999999999999999999997489973899656776556772764899998837983788973887999- Q gi|254780280|r 235 IVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVI- 313 (348) Q Consensus 235 ~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~- 313 (348) .+++.+|+.|.+++++++++||.+++|++++|+|+. |||||+++.....|+. .+++.+.++... ...++|..+ T Consensus 282 ~~~~~gd~~a~~~~~~~~~~l~~~i~nl~~~ldPe~-IvlgG~~~~~~~~~~~--~i~~~~~~~~~~---~~~~~I~~s~ 355 (380) T 2hoe_A 282 EARDSGDVRVKEYFDDIARYFSIGLLNLIHLFGISK-IVIGGFFKELGENFLK--KIKIEVETHLLY---KHSVDMSFSK 355 (380) T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEEEGGGGGHHHHHH--HHHHHHHHHCSS---SCCCEEEECC T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECHHHHCHHHHHH--HHHHHHHHHCCC---CCCCEEEECC T ss_conf 651268988999999999999999999999989998-9990936868288999--999999971777---7898699888 Q ss_pred ECCCCHHHHHHHHHHCC Q ss_conf 57872277599987380 Q gi|254780280|r 314 TNPYIAIAGMVSYIKMT 330 (348) Q Consensus 314 ~~~~agl~GAa~~~r~~ 330 (348) .+++++++|||.++.++ T Consensus 356 l~~~~~~~GAA~~al~~ 372 (380) T 2hoe_A 356 VQEPVIAFGAAVHALEN 372 (380) T ss_dssp CCSCHHHHHHHHHHHHH T ss_pred CCCCHHHHHHHHHHHHH T ss_conf 89839999999999999 |
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12} | Back alignment and structure |
---|
Probab=100.00 E-value=3e-36 Score=240.62 Aligned_cols=278 Identities=17% Similarity=0.179 Sum_probs=187.6 Q ss_pred CCCEEEEEECCCCEEEEEEECCCCEEEEEEEECC--CCCCCHHHHHHHHHHHC---CCCCCCEEEEEEEEEEECCC--EE Q ss_conf 7737999857511899998779980889997438--87358899999999722---34565546999730441685--56 Q gi|254780280|r 12 AFPVLLADIGGTNVRFAILRSMESEPEFCCTVQT--SDYENLEHAIQEVIYRK---ISIRLRSAFLAIATPIGDQK--SF 84 (348) Q Consensus 12 ~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t--~~~~~~~~~i~~~l~~~---~~~~~~~igi~v~Gpv~~~~--~~ 84 (348) .-.|++||||||++|++++|.. +++....+.++ .+++++.+.+.+.+.+. ...++.++|||+||+|+... .. T Consensus 6 ~~~v~GIDiGgt~i~~~l~d~~-g~i~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~i~gIgia~pG~vd~~~g~v~ 84 (310) T 3htv_A 6 HNVVAGVDMGATHIRFCLRTAE-GETLHCEKKRTAEVIAPGLVSGIGEMIDEQLRRFNARCHGLVMGFPALVSKDKRTII 84 (310) T ss_dssp EEEEEEEEECSSEEEEEEEETT-SCEEEEEEEEHHHHHTTCHHHHHHHHHHHHHHHHTEEEEEEEEEESSCBCTTSSCBC T ss_pred CCEEEEEEECCCEEEEEEECCC-CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCEEE T ss_conf 9899999976667999999299-989999996188878899999999999999987599730799982630867998499 Q ss_pred EECCCCC---C-CCH-HHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEE Q ss_conf 4213566---6-698-8999982898558821265432000015865535302434557666752799317620224543 Q gi|254780280|r 85 TLTNYHW---V-IDP-EELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSV 159 (348) Q Consensus 85 ~~~~~~~---~-~~~-~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~ 159 (348) ..++.+| . ++. ..+.+.++ .||.++||++|.++++.+. .......++++..|||+|.+++ T Consensus 85 ~~~~~~~~~~~~~~l~~~l~~~~~-~pv~i~ND~~aaa~~e~~~--------------~~~~~~~~~~i~~gtGiG~gii 149 (310) T 3htv_A 85 STPNLPLTAADLYDLADKLENTLN-CPVEFSRDVNLQLSWDVVE--------------NRLTQQLVLAAYLGTGMGFAVW 149 (310) T ss_dssp SCCSSSCCHHHHTTHHHHHHHHHT-SCEEEEEHHHHHHHHHHHH--------------TTCTTSCEEEEEESSSEEEEEE T ss_pred ECCCCCCCCCCCCCHHHHHHHHHC-CCEEEECCHHHHHHHHHHH--------------CCCCCCEEEEEEECCCCCCCCC T ss_conf 568778644447767999878629-8579955377777766540--------------3454665999984671355413 Q ss_pred ECCC--CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH- Q ss_conf 1058--8630113567866667661023478999985318986487752222389999999874088864369888998- Q gi|254780280|r 160 IRAK--DSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIV- 236 (348) Q Consensus 160 ~~~~--~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~~- 236 (348) .++. .|.+..+||+||+++.+... .|.|+..+|+|+++|+++|.+.|+.. .......++. T Consensus 150 ~~g~i~~G~~g~aGEiGh~~~~~~~~---------~~~cg~~gc~e~~~S~~~l~~~~~~~--------~~~~~~~~~~~ 212 (310) T 3htv_A 150 MNGAPWTGAHGVAGELGHIPLGDMTQ---------HCACGNPGCLETNCSGMALRRWYEQQ--------PRNYPLRDLFV 212 (310) T ss_dssp ETTEEECCSSSCCCC------------------------------CCSSSHHHHHHHHTTS--------CCSSCGGGHHH T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCC---------CCCCCCCHHHHHHCCHHHHHHHHHHC--------CCCCCHHHHHH T ss_conf 47864558765445454023579987---------45677511445532599999999753--------12352899997 Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHH-HHHCCEEEE-E Q ss_conf 83689579999999999999999999997489973899656776556772764899998837983788-973887999-5 Q gi|254780280|r 237 SKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKEL-MRQIPTYVI-T 314 (348) Q Consensus 237 ~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~-l~~ipv~~~-~ 314 (348) ....|+ +++.+.+++++.++|++++|+|+. |||||+++.. ..++ .+.+.+.+.+.. +..+ -+.++|..+ . T Consensus 213 ~~~~~~----~~~~~~~~~~~~ia~li~~ldp~~-IVigG~i~~~-~~~~-~~~l~~~~~~~~-~~~~~~~~~~i~~s~~ 284 (310) T 3htv_A 213 HAENAP----FVQSLLENAARAIATSINLFDPDA-VILGGGVMDM-PAFP-RETLVAMTQKYL-RRPLPHQVVRFIAASS 284 (310) T ss_dssp HHTTCH----HHHHHHHHHHHHHHHHHHHHCCSE-EEEECTTTTS-TTCC-HHHHHHHHHHTS-CTTTTTTTCEEEECCC T ss_pred HHHCCC----HHHHHHHHHHHHHHHHHHHCCCCE-EEEECHHHCC-HHHH-HHHHHHHHHHHH-CCCCCCCCCEEEECCC T ss_conf 763360----554567789999998987518988-9980825506-4678-999999999985-2235767887998885 Q ss_pred CCCCHHHHHHHHHHCC Q ss_conf 7872277599987380 Q gi|254780280|r 315 NPYIAIAGMVSYIKMT 330 (348) Q Consensus 315 ~~~agl~GAa~~~r~~ 330 (348) +++++++|||.++.++ T Consensus 285 ~~~~~~~GAA~la~~~ 300 (310) T 3htv_A 285 SDFNGAQGAAILAHQR 300 (310) T ss_dssp CTTHHHHHHHHHHHHH T ss_pred CCHHHHHHHHHHHHHH T ss_conf 7758899999999998 |
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
---|
Probab=100.00 E-value=3.7e-34 Score=227.75 Aligned_cols=291 Identities=19% Similarity=0.127 Sum_probs=199.0 Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCC--CCCCHHHHHHHHHHHC--CCCCCCEEEEEEEEEEECCCEEE Q ss_conf 6677379998575118999987799808899974388--7358899999999722--34565546999730441685564 Q gi|254780280|r 10 PIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTS--DYENLEHAIQEVIYRK--ISIRLRSAFLAIATPIGDQKSFT 85 (348) Q Consensus 10 ~~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~--~~~~~~~~i~~~l~~~--~~~~~~~igi~v~Gpv~~~~~~~ 85 (348) |.+|= |+|||||||||++++|.. +++..+.+.||. +++.+.+.+.+.+++. .......+||++||+++...... T Consensus 22 ~~~~y-lGiDiGGT~i~~al~d~~-G~il~~~~~~t~~~~~~~~l~~i~~~i~~~~~~~~~~~~igi~~~G~vd~~~g~i 99 (327) T 2ap1_A 22 SNAMY-YGFDIGGTKIALGVFDST-RRLQWEKRVPTPHTSYSAFLDAVCELVEEADQRFGVKGSVGIGIPGMPETEDGTL 99 (327) T ss_dssp -CCEE-EEEEECSSEEEEEEEETT-CCEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHTSCCEEEEEESSBSCCTTSCC T ss_pred CCCEE-EEEEECCCEEEEEEECCC-CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEE T ss_conf 89579-999967224999999199-9899999986999999999999999999998863887289999788654678648 Q ss_pred --ECCCCCCC-CH-HHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEEC Q ss_conf --21356666-98-899998289855882126543200001586553530243455766675279931762022454310 Q gi|254780280|r 86 --LTNYHWVI-DP-EELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIR 161 (348) Q Consensus 86 --~~~~~~~~-~~-~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~ 161 (348) .+...|.. +. .+|.+.++. ||.++||.++.+++|.+++. ......++++..|+|+|.+.+.+ T Consensus 100 ~~~~~~~~~~~~l~~~L~~~~~~-~v~~~nD~~~~Al~e~~~g~-------------~~~~~~~~~~~ig~gig~g~~~~ 165 (327) T 2ap1_A 100 YAANVPAASGKPLRADLSARLDR-DVRLDNDANCFALSEAWDDE-------------FTQYPLVMGLILGTGVGGGLVLN 165 (327) T ss_dssp BCTTCTTTTTSCHHHHHHHHHTS-CEEEEEHHHHHHHHHHTSTT-------------GGGCSEEEEEEESSSEEEEEEET T ss_pred ECCCCCCCCCCHHHHHHHHHHCC-CEEEECCCHHHHHHHHHCCC-------------CCCCCEEEEEEECCCCCCEEEEC T ss_conf 34667332466099999998799-87982475187888876177-------------65235189999646422137745 Q ss_pred CC--CCCEECCCCCCCCCCCCCCHHHHHH-HHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH Q ss_conf 58--8630113567866667661023478-99998531898648775222238999999987408886436988899883 Q gi|254780280|r 162 AK--DSWIPISCEGGHMDIGPSTQRDYEI-FPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSK 238 (348) Q Consensus 162 ~~--~g~~~~agE~Gh~~~~~~~~~~~~~-~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~~~~ 238 (348) +. .|.+..++|+||+.+.+........ .....|.|+..+|+|.++|...+.+.+..... ..........+++ T Consensus 166 g~~~~G~~g~ageig~~~v~~~g~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~~~ 240 (327) T 2ap1_A 166 GKPITGQSYITGEFGHMRLPVDALTLMGFDFPLRRCGCGQMGCIENYLSGRGFAWLYQHYYD-----QSLQAPEIIALWE 240 (327) T ss_dssp TEEECCTTSCTTCGGGSBCCHHHHHHHCTTSCCCBCTTSCBSBTHHHHSHHHHHHHHHHHHC-----CCCCHHHHHHHHH T ss_pred CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCC-----CCCCHHHHHHHHH T ss_conf 74355887626465578866887444466666543345566751432135899999875225-----5443244445776 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCH--HHHHHHCCEEEE-EC Q ss_conf 689579999999999999999999997489973899656776556772764899998837983--788973887999-57 Q gi|254780280|r 239 SEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPH--KELMRQIPTYVI-TN 315 (348) Q Consensus 239 ~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~--~~~l~~ipv~~~-~~ 315 (348) .+|+.|.+.+++++++|+.+++|++++|+|+. |||||+++.. .+++ +...++.+. .+....++|..+ ++ T Consensus 241 ~gd~~a~~~i~~~~~~l~~~ianl~~l~dP~~-IvlGG~v~~~-~~~~------~~i~~~~~~~~~~~~~~~~I~~a~lg 312 (327) T 2ap1_A 241 QGDEQAHAHVERYLDLLAVCLGNILTIVDPDL-LVIGGGLSNF-TAIT------TQLAERLPRHLLPVARAPRIERARHG 312 (327) T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSE-EEEESGGGGS-THHH------HSSGGGSGGGSCTTCCCCEEEECSCT T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECHHHCC-HHHH------HHHHHHHHHHCCCCCCCCEEEECCCC T ss_conf 07756679999999999999999999749998-9992703253-8899------99999999861465789989989978 Q ss_pred CCCHHHHHHHHHHC Q ss_conf 87227759998738 Q gi|254780280|r 316 PYIAIAGMVSYIKM 329 (348) Q Consensus 316 ~~agl~GAa~~~r~ 329 (348) ++++++|||.++-+ T Consensus 313 ~~a~l~GAa~lAl~ 326 (327) T 2ap1_A 313 DAGGMRGAAFLHLT 326 (327) T ss_dssp TTHHHHHHHHTTSC T ss_pred CHHHHHHHHHHHHC T ss_conf 85999999999836 |
>3lm2_A Putative kinase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, transferase; HET: MSE; 1.70A {Agrobacterium tumefaciens} | Back alignment and structure |
---|
Probab=100.00 E-value=2.2e-32 Score=216.73 Aligned_cols=218 Identities=17% Similarity=0.155 Sum_probs=157.4 Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEE-ECCCCC Q ss_conf 7379998575118999987799808899974388735889999999972234565546999730441685564-213566 Q gi|254780280|r 13 FPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFT-LTNYHW 91 (348) Q Consensus 13 ~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~-~~~~~~ 91 (348) .++|++||||||+|++++|.. +++.. ++....+.++.++.+.+.......+++||++||||+.+.... .+++.| T Consensus 6 ~~vlgiDIGGT~i~~~l~d~~-~~~~~----~t~~~~~~~~~~~~i~~~i~~~~~~~igi~~pG~vd~~~~i~~~~~~~~ 80 (226) T 3lm2_A 6 QTVLAIDIGGSHVKIGLSTDG-EERKV----ESGKTMTGPEMVAAVTAMAKDMTYDVIAMGYPGPVVHNKPLREPVNLGE 80 (226) T ss_dssp CCEEEEEECSSEEEEEETTTC-CEEEE----ECCTTCCHHHHHHHHHHHTTTCCCSEEEEEESSCEETTEECSCCTTSCS T ss_pred CEEEEEEECCCEEEEEEEECC-CCEEE----ECCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCC T ss_conf 859999978856999999799-86899----6589999799999999999750323518951688777732896057663 Q ss_pred CCCHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEECCC Q ss_conf 66988999982898558821265432000015865535302434557666752799317620224543105886301135 Q gi|254780280|r 92 VIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISC 171 (348) Q Consensus 92 ~~~~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~ag 171 (348) ......+.+.++ .||.++||++|++++|+++ ..+++++.|||+|.+.+.++. ..++ T Consensus 81 ~~~~~~l~~~~g-~pv~v~NDanaaalgE~~~-------------------~~~~~i~~GtGiG~gii~~G~----l~aG 136 (226) T 3lm2_A 81 GWVGYDYEGAFG-RPVRIVNDALMQAIGSYNG-------------------GRMLFLGLGTGLGAAMIVENV----AQPM 136 (226) T ss_dssp CCTTCCHHHHHT-SCEEEEEHHHHHHHHHCCS-------------------SEEEEEEESSSEEEEEEETTE----EEEE T ss_pred CHHHHHHHHHHC-CCEEEECHHHHHHHHHHHC-------------------CCCCEEEEEEEEEEEEEECCE----EECC T ss_conf 001357998619-9989924799988534234-------------------777659972899988999998----9536 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH Q ss_conf 67866667661023478999985318986487752222389999999874088864369888998836895799999999 Q gi|254780280|r 172 EGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSKSEDPIALKAINLF 251 (348) Q Consensus 172 E~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~~~~~~D~~A~~~~~~~ 251 (348) |.||++ |+..+|+|.++|++++.+. .+++| T Consensus 137 E~Gh~~------------------~~~~~~~E~~~s~~~~~~~--------------------------------~~~~~ 166 (226) T 3lm2_A 137 EIAHLP------------------YRKGKTYEHYVSEAYREKK--------------------------------GNAKW 166 (226) T ss_dssp CCTTSE------------------EETTEEHHHHTCHHHHHHH--------------------------------CHHHH T ss_pred CCCCEE------------------CCCCCCHHHHHCCCCCHHH--------------------------------HHHHH T ss_conf 454122------------------6999878887276751345--------------------------------79999 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHCCC Q ss_conf 99999999999997489973899656776556772764899998837983788973887999578722775999873800 Q gi|254780280|r 252 CEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAGMVSYIKMTD 331 (348) Q Consensus 252 ~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~GAa~~~r~~~ 331 (348) +++|++++++++++|+|+. |||||||++++..+.. .++ ...++++++||+.+.+..| T Consensus 167 ~~~l~~~l~~l~~~~dPe~-iViGGGis~~~~~~~~---------------------~v~-~~~n~a~~~g~a~lw~~~~ 223 (226) T 3lm2_A 167 QKRVQDVVERLSAALEPDE-VVIGGGNVERLENLPP---------------------KCR-RGDNAMAFEGGFRLWKNAD 223 (226) T ss_dssp HHHHHHHHHHHHHHHCCSE-EEEESGGGGGCCCCCT---------------------TEE-ECCTTHHHHHHHHHHHCTT T ss_pred HHHHHHHHHHHHHHHCCCE-EEECCHHHHHHHHHCH---------------------HHE-EECCCHHHHHHHHHCCCCC T ss_conf 9999999999999859898-9988957750334175---------------------448-9377368899998665754 Q ss_pred C Q ss_conf 1 Q gi|254780280|r 332 C 332 (348) Q Consensus 332 ~ 332 (348) . T Consensus 224 ~ 224 (226) T 3lm2_A 224 L 224 (226) T ss_dssp C T ss_pred C T ss_conf 3 |
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
---|
Probab=100.00 E-value=8.7e-32 Score=213.10 Aligned_cols=239 Identities=20% Similarity=0.239 Sum_probs=162.1 Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCEEE-EEEEECCCCCCC---HHHHHHHHHHHCC-----CCCCCEEEEEEEEEEEC Q ss_conf 66773799985751189999877998088-999743887358---8999999997223-----45655469997304416 Q gi|254780280|r 10 PIAFPVLLADIGGTNVRFAILRSMESEPE-FCCTVQTSDYEN---LEHAIQEVIYRKI-----SIRLRSAFLAIATPIGD 80 (348) Q Consensus 10 ~~~~~vL~iDIGGT~ir~glv~~~~~~i~-~~~~~~t~~~~~---~~~~i~~~l~~~~-----~~~~~~igi~v~Gpv~~ 80 (348) ....+||+|||||||||++++|.+++++. .+.+.||....+ +.+.+.+++.+.. ...+.++||++||+|+. T Consensus 9 ~~~~~viGiDiGGT~i~~~l~d~~~~~i~~~~~~~~t~~~~~~~~i~~~i~~~i~~l~~~~~~~~~~~gIGi~~PG~vd~ 88 (267) T 1woq_A 9 HKNAPLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTPQPATPESVAEAVALVVAELSARPEAPAAGSPVGVTFPGIIQH 88 (267) T ss_dssp --CCCEEEEEECSSEEEEEEEETTTTEEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHTSTTCCCTTCCEEEEESSCEET T ss_pred CCCCCEEEEEECCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEE T ss_conf 89998999998776599999989999899999996789999999999999999999875026776452132268870554 Q ss_pred CCEEEECC--CCCC-CCHHH-HHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC-CCCEEEECCCCEEE Q ss_conf 85564213--5666-69889-99982898558821265432000015865535302434557666-75279931762022 Q gi|254780280|r 81 QKSFTLTN--YHWV-IDPEE-LISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSL-FSSRVIVGPGTGLG 155 (348) Q Consensus 81 ~~~~~~~~--~~~~-~~~~~-l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~ig~GtG~g 155 (348) +.....++ ..|. ++..+ +.+.++ .||.++||++|++++|.+++.. .. ...++++..|||+| T Consensus 89 ~~~~~~~~~~~~~~~~~l~~~l~~~~~-~pV~v~NDanaaAlaE~~~G~~-------------~~~~~~~~~~~~gtGiG 154 (267) T 1woq_A 89 GVVHSAANVDKSWLNTDIDALLTARLG-RPVEVINDADAAGLAEARYGAG-------------AGVKGTVLVITLGTGIG 154 (267) T ss_dssp TEECCCTTSCGGGTTCBHHHHHHHHHT-SCEEEEEHHHHHHHHHHHHSTT-------------TTCCSEEEEEEESSSEE T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHC-CCEEEECCCCHHHHHHHHHCCC-------------CCCCCCEEEEEECCEEE T ss_conf 005651576534358857899999879-9989812421368888651846-------------58878379999788785 Q ss_pred EEEEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHH Q ss_conf 45431058863011356786666766102347899998531898648775222238999999987408886436988899 Q gi|254780280|r 156 ISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDI 235 (348) Q Consensus 156 ~~~~~~~~~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~ 235 (348) .+.++++ ....+||+||+++.+.. .|.+++..+..+ T Consensus 155 ~g~v~~G---~~~~gGEiGH~~v~~~~-------------------~~~~~~~~~~~~---------------------- 190 (267) T 1woq_A 155 SAFIFDG---KLVPNAELGHLEIDGHD-------------------AETKASAVARER---------------------- 190 (267) T ss_dssp EEEEETT---EEETTCCGGGCEETTEE-------------------HHHHHSHHHHHH---------------------- T ss_pred CCCCCCC---CEEECCEEEEEEECCCC-------------------HHHHHHHHHHHH---------------------- T ss_conf 0311589---61605762588978996-------------------132453767501---------------------- Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEE-E Q ss_conf 883689579999999999999999999997489973899656776556772764899998837983788973887999-5 Q gi|254780280|r 236 VSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVI-T 314 (348) Q Consensus 236 ~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~-~ 314 (348) |.. .+++++++|+++++|++++++|+. ||||||++.....|+.. .+ ++++|..+ + T Consensus 191 -----~~~---~~~~~~~~l~~~la~l~~~~dPe~-IvlGGgi~~~~~~~~~~----------l~-----~~~~I~~s~l 246 (267) T 1woq_A 191 -----DGL---SWDEYSVLLQRYFSHVEFLFSPEL-FIVGGGISKRADEYLPN----------LR-----LRTPIVPAVL 246 (267) T ss_dssp -----TTC---CHHHHHHHHHHHHHHHHHHHCCSE-EEEESGGGGGGGGTGGG----------CC-----CSSCEEECSC T ss_pred -----CCH---HHHHHHHHHHHHHHHHHHHHCCCE-EEECCHHHHHHHHHHHH----------HH-----CCCCEEECCC T ss_conf -----222---167999999999999999868999-99979899849999876----------52-----3894997786 Q ss_pred CCCCHHHHHHHHHHCC Q ss_conf 7872277599987380 Q gi|254780280|r 315 NPYIAIAGMVSYIKMT 330 (348) Q Consensus 315 ~~~agl~GAa~~~r~~ 330 (348) +++++++|||..+.+. T Consensus 247 g~~A~~~GAA~~~~~~ 262 (267) T 1woq_A 247 RNEAGIVGAAIEIALQ 262 (267) T ss_dssp STTHHHHHHHHHHHHH T ss_pred CCCHHHHHHHHHHHHH T ss_conf 8849999999999985 |
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, ribonuclease H fold, sugar kinase/HSP70/actin superfamily, domain rotation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* | Back alignment and structure |
---|
Probab=99.96 E-value=1.1e-27 Score=187.69 Aligned_cols=297 Identities=11% Similarity=-0.069 Sum_probs=162.0 Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCC--CCHH-------HHHHHHHHHCC---CCCCCEEEEEEEEE Q ss_conf 667737999857511899998779980889997438873--5889-------99999997223---45655469997304 Q gi|254780280|r 10 PIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDY--ENLE-------HAIQEVIYRKI---SIRLRSAFLAIATP 77 (348) Q Consensus 10 ~~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~--~~~~-------~~i~~~l~~~~---~~~~~~igi~v~Gp 77 (348) +|+.=.|+||+||||+|++++|. +++++.+.+.++..+ .+.+ +.+++++++.. ...+.+++++.+|. T Consensus 3 ~m~~~~iGIDiGGTk~~~~l~d~-~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~g~~~~~~i~~ig~~~~g~ 81 (347) T 2ch5_A 3 FMAAIYGGVEGGGTRSEVLLVSE-DGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGG 81 (347) T ss_dssp SSSCEEEEEEECTTCEEEEEEET-TSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTT T ss_pred CCCCEEEEEECCCHHEEEEEECC-CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC T ss_conf 64878999990612128889949-99999999946899665899999999999999999974999776444433423665 Q ss_pred EECCCEEEECCCCCCCCHHHHHH--HHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEE Q ss_conf 41685564213566669889999--8289855882126543200001586553530243455766675279931762022 Q gi|254780280|r 78 IGDQKSFTLTNYHWVIDPEELIS--RMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLG 155 (348) Q Consensus 78 v~~~~~~~~~~~~~~~~~~~l~~--~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g 155 (348) +....... ....... .....+|.+.||.++.++++... . .+.+..|||.+ T Consensus 82 ~~~~~~~~--------~~~~~~~~~~~~~~~v~i~nDa~a~~~~~~~~------------------~--~~~~~~gtg~~ 133 (347) T 2ch5_A 82 DQEDAGRI--------LIEELRDRFPYLSESYLITTDAAGSIATATPD------------------G--GVVLISGTGSN 133 (347) T ss_dssp TCHHHHHH--------HHHHHHHHCTTSBSCEEEEEHHHHHHHHHCSS------------------C--EEEEEESSSEE T ss_pred CCCCCCEE--------CCCHHHHHCCCCCCEEEEECHHHHHHHHHCCC------------------C--CEEEEECCCEE T ss_conf 57531211--------14123343257787199956699988764059------------------9--48999702589 Q ss_pred EEEEECCC--CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH------HHHHHHCCCCCC Q ss_conf 45431058--8630113567866667661023478999985318986487752222389999------999874088864 Q gi|254780280|r 156 ISSVIRAK--DSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIY------KALCIADGFESN 227 (348) Q Consensus 156 ~~~~~~~~--~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y------~~l~~~~~~~~~ 227 (348) ........ .+...+..+.||..................+.|....|.+...+...+...+ ..+......... T Consensus 134 ~~~~~~~~~~~~~~g~g~~~G~~~~~~~ig~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (347) T 2ch5_A 134 CRLINPDGSESGCGGWGHMMGDEGSAYWIAHQAVKIVFDSIDNLEAAPHDIGYVKQAMFHYFQVPDRLGILTHLYRDFDK 213 (347) T ss_dssp EEEECTTSCEEEEECCCTTTCCTTSHHHHHHHHHHHHHHHHHTSSCCSSCCHHHHHHHHHHHTCSSHHHHHTTTTTTCCH T ss_pred EEEEECCCCEEEECCCCEEECCCCCCCCHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCH T ss_conf 99997697169954753113345766400012202322147887665411689999999760899779999998616783 Q ss_pred CC----CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-------EEEECHHHHHHHHHHCCHHHHHHHH Q ss_conf 36----988899883689579999999999999999999997489973-------8996567765567727648999988 Q gi|254780280|r 228 KV----LSSKDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGG-------VYISGGIPYKIIDLLRNSSFRESFE 296 (348) Q Consensus 228 ~~----~~~~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~-------IvlgGGi~~~~~~~l~~~~f~~~f~ 296 (348) .. ......++++||+.|++++++++++||+.+++++++++|+.. ||||||++.+...++ +.|++.+. T Consensus 214 ~~~a~~~~~v~~~A~~GD~~A~~ii~~~~~~Lg~~ia~~~~~ldP~~~~~~~~~~VVlgGgv~~~~~~l~--~~~~~~l~ 291 (347) T 2ch5_A 214 CRFAGFCRKIAEGAQQGDPLSRYIFRKAGEMLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLK--EGFLLALT 291 (347) T ss_dssp HHHHTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHH--HHHHHHHH T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCHHHCCHHHH--HHHHHHHH T ss_conf 4566650444788877899999999999999999999999851936434788854999860574887899--99999998 Q ss_pred HCCCHHHHHHHC-CEEEEECCCCHHHHHHHHHHCCCCCCCCCC Q ss_conf 379837889738-879995787227759998738001244457 Q gi|254780280|r 297 NKSPHKELMRQI-PTYVITNPYIAIAGMVSYIKMTDCFNLFIS 338 (348) Q Consensus 297 ~~~~~~~~l~~i-pv~~~~~~~agl~GAa~~~r~~~~~~~~~~ 338 (348) ++... ...... .++++..++++++||+.+++++....++.+ T Consensus 292 ~~~~~-~~~~~~~~v~~~~~~~~~~~GAa~LA~~~~~~~l~~~ 333 (347) T 2ch5_A 292 QGREI-QAQNFFSSFTLMKLRHSSALGGASLGARHIGHLLPMD 333 (347) T ss_dssp HHC----CCCSCSEEEEEEESSCTHHHHHHHHHHTTTCCCCCC T ss_pred HHCCC-CCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCC T ss_conf 63221-1025677069964898759999999998659977887 |
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuclease-H fold, sugar kinase, glucose, conformational change; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* | Back alignment and structure |
---|
Probab=99.95 E-value=1.3e-27 Score=187.31 Aligned_cols=276 Identities=13% Similarity=-0.002 Sum_probs=165.1 Q ss_pred CCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCC-----CCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEE Q ss_conf 7737999857511899998779980889997438873-----58899999999722345655469997304416855642 Q gi|254780280|r 12 AFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDY-----ENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTL 86 (348) Q Consensus 12 ~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~-----~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~ 86 (348) +|-+|+|||||||++++++|.+ ++++...+.++... +.+.+.|.+.+++........++++++||.... T Consensus 1 mm~~iGIDiGgT~~~~~l~d~~-G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~gig~~g~~~~~----- 74 (299) T 2e2o_A 1 MMIIVGVDAGGTKTKAVAYDCE-GNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIAAKGEADVVGMGVAGLDSKF----- 74 (299) T ss_dssp CCCEEEEEECSSCEEEEEECTT-SCEEEEEEESCCCHHHHCHHHHHHHHHHHHHHHHTSCCSEEEEEETTCCSHH----- T ss_pred CCEEEEEEECHHHEEEEEECCC-CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHH----- T ss_conf 9299999937003799999499-9899999927899652209999999999999855898548987047877602----- Q ss_pred CCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECC---- Q ss_conf 1356666988999982898558821265432000015865535302434557666752799317620224543105---- Q gi|254780280|r 87 TNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRA---- 162 (348) Q Consensus 87 ~~~~~~~~~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~---- 162 (348) ............+.+|.+.||+++.++.+....+... +..|++...+..... T Consensus 75 -----~~~~~~~l~~~~~~~v~i~nd~~~a~~~~~~~~~~~~-------------------~~~g~~~~~~~~~~~~~~~ 130 (299) T 2e2o_A 75 -----DWENFTPLASLIAPKVIIQHDGVIALFAETLGEPGVV-------------------VIAGTGSVVEGYNGKEFLR 130 (299) T ss_dssp -----HHHHHHHHHTTSSSEEEEEEHHHHHHHHHHTTSCEEE-------------------EEESSSEEEEEECSSCEEE T ss_pred -----HHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCCCEE-------------------EECCCCEEEEEEECCEEEE T ss_conf -----3689999986038978997429999987347888079-------------------9715641577883351799 Q ss_pred ------CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCC--CHHH Q ss_conf ------88630113567866667661023478999985318986487752222389999999874088864369--8889 Q gi|254780280|r 163 ------KDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVL--SSKD 234 (348) Q Consensus 163 ------~~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~--~~~~ 234 (348) ..|....+++.||........ ......+.|....|+|.+.++....++................ .... T Consensus 131 ~~~~~~~~g~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 206 (299) T 2e2o_A 131 VGGRGWLLSDDGSAYWVGRKALRKVLK----MMDGLENKTILYNKVLKTINVKDLDELVMWSYTSSCQIDLVASIAKAVD 206 (299) T ss_dssp EECSCTTTCCTTSHHHHHHHHHHHHHH----HHTTSSCCCHHHHHHHHHTTCCSHHHHHHHHHHHTTCHHHHHTTHHHHH T ss_pred EECCCCCCCCCCCCCCCCHHHHCCCCC----CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHCHHHH T ss_conf 704665336765133000132202233----4457889862889999996799999999998505786035554221545 Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEE Q ss_conf 98836895799999999999999999999974899738996567765567727648999988379837889738879995 Q gi|254780280|r 235 IVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVIT 314 (348) Q Consensus 235 ~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~ 314 (348) .+++++|+.|++++++++++|+..++|+++.++|+. ||||||++.. +.|++.| ++++++-.+.... T Consensus 207 ~~a~~gd~~A~~i~~~~~~~L~~~la~~~~~~~p~~-IvlgGgv~~~-------~~~~~~l------~~~l~~~~~~~~~ 272 (299) T 2e2o_A 207 EAANEGDTVAMDILKQGAELLASQAVYLARKIGTNK-VYLKGGMFRS-------NIYHKFF------TLYLEKEGIISDL 272 (299) T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCSE-EEEESGGGGS-------HHHHHHH------HHHHHHTTCEEEC T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECCHHCC-------HHHHHHH------HHHHHCCCEECCC T ss_conf 444059999999999999999999999998619977-9998933127-------6799999------9997337341567 Q ss_pred CCCCHHHHHHHHHHCCCCCCC Q ss_conf 787227759998738001244 Q gi|254780280|r 315 NPYIAIAGMVSYIKMTDCFNL 335 (348) Q Consensus 315 ~~~agl~GAa~~~r~~~~~~~ 335 (348) .++++++|||.+++++-+.+. T Consensus 273 ~~~~~~~GAa~lA~~~~g~~~ 293 (299) T 2e2o_A 273 GKRSPEIGAVILAYKEVGCDI 293 (299) T ss_dssp CSCCHHHHHHHHHHHHHTCCG T ss_pred CCCCHHHHHHHHHHHHCCCCH T ss_conf 886699999999999849984 |
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, structural genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum atcc 12472} SCOP: c.55.1.5 c.55.1.5 | Back alignment and structure |
---|
Probab=99.88 E-value=8.6e-22 Score=151.35 Aligned_cols=277 Identities=14% Similarity=0.040 Sum_probs=137.9 Q ss_pred CCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCC-CCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEEC Q ss_conf 76677379998575118999987799808899974388-73588999999997223456554699973044168556421 Q gi|254780280|r 9 FPIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTS-DYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLT 87 (348) Q Consensus 9 ~~~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~-~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~~~~~~ 87 (348) .|++.-+|+|||||||+|++++|.+ ++++...+.++. ...+++++++.+.+.... ..+..++..+...........+ T Consensus 7 ~~~m~y~iGIDiGgT~i~~~l~d~~-G~il~~~~~~~~~~~~~~~~~~~~i~~~i~~-~~~~~gi~~~~~~~~~~~~~~~ 84 (305) T 1zc6_A 7 NPSIRYLIGVDGGGTGTRIRLHASD-GTPLAMAEGGASALSQGIAKSWQAVLSTLEA-AFQQAGLPAAPASACAIGLGLS 84 (305) T ss_dssp -CCCCEEEEEEECSSCEEEEEEETT-CCEEEEEEESCCCGGGCHHHHHHHHHHHHHH-HHHHTTCCCCCGGGEEEEEEES T ss_pred CCCCCEEEEEECCCCEEEEEEECCC-CCEEEEEEECCCCCCCCHHHHHHHHHHHHHH-HHHHCCCCCCCCCCEEEECCCC T ss_conf 9888689999928100899999799-9899999966998566999999999999999-9997499965433233202567 Q ss_pred CCCCCCCHHHHH-HHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCC-C Q ss_conf 356666988999-98289855882126543200001586553530243455766675279931762022454310588-6 Q gi|254780280|r 88 NYHWVIDPEELI-SRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKD-S 165 (348) Q Consensus 88 ~~~~~~~~~~l~-~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~-g 165 (348) ...|......+. ....+.++.+.||+++..+++... ....+.+..+++.+.+....... . T Consensus 85 g~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~ 146 (305) T 1zc6_A 85 GVHNRQWAGEFESQAPGFARLSLATDGYTTLLGAHGG------------------QPGIIVALGTGSIGEALYPDGSHRE 146 (305) T ss_dssp CCCTTSHHHHHHHTCCCCSEEEEECHHHHHHHHHTTT------------------SSEEEEEESSSEEEEEECTTSCEEE T ss_pred CCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCC------------------CCEEEEEECCCCEEEEEECCCEEEE T ss_conf 7664204788888643687377603599998633068------------------9869999747735899987832897 Q ss_pred CEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHH---------HHCCCCCC--CCCCHHH Q ss_conf 301135678666676610234789999853189864877522223899999998---------74088864--3698889 Q gi|254780280|r 166 WIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALC---------IADGFESN--KVLSSKD 234 (348) Q Consensus 166 ~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~---------~~~~~~~~--~~~~~~~ 234 (348) ........|+.......... +.++...+.+...|+..+.+...... ........ ....... T Consensus 147 ~~g~g~~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (305) T 1zc6_A 147 AGGWGYPSGDEASGAWLGQR--------AAQLTQMALDGRHSHSPLTRAVLDFVGGDWQAMMAWNGRATPAQFARLAPLV 218 (305) T ss_dssp ESCCCTTTSCTTSHHHHHHH--------HHHHHHHHHHTSSCCCHHHHHHHHHHTSSHHHHHHHHHTCCHHHHHTTHHHH T ss_pred ECCEEEEECCCCCCCCCCCC--------CCCCCEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHH T ss_conf 35510253454445556632--------2123200003667715999999987169858888988607803555541466 Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEE Q ss_conf 98836895799999999999999999999974899738996567765567727648999988379837889738879995 Q gi|254780280|r 235 IVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVIT 314 (348) Q Consensus 235 ~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~ 314 (348) ..++.+|+.|.+++++++++|+..+ +.+..++|+. |||+|||+..+.++|. +.+++.+ +. T Consensus 219 ~~~~~gd~~a~~i~~~~~~~La~~i-~~l~~~dp~~-VVlgGGv~~~~~~~l~-~~i~~~l-----------------~~ 278 (305) T 1zc6_A 219 LSAARVDPEADALLRQAGEDAWAIA-RALDPQDELP-VALCGGLGQALRDWLP-PGFRQRL-----------------VA 278 (305) T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHH-HHHCTTCCSC-EEEESHHHHHTGGGSC-HHHHHHC-----------------CC T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHH-HHHHCCCCCE-EEEECCHHHHHHHHHH-HHHHCCC-----------------CC T ss_conf 6652347899999999999999999-9985059980-9998926888999987-9985515-----------------05 Q ss_pred CCCCHHHHHHHHHHCCCCC Q ss_conf 7872277599987380012 Q gi|254780280|r 315 NPYIAIAGMVSYIKMTDCF 333 (348) Q Consensus 315 ~~~agl~GAa~~~r~~~~~ 333 (348) ....+++||+.+|+++..+ T Consensus 279 ~~~~~~~GA~~lA~~~~~~ 297 (305) T 1zc6_A 279 PQGDSAQGALLLLQRPSTR 297 (305) T ss_dssp CSSCHHHHHHHHTC----- T ss_pred CCCCHHHHHHHHHHHHHHC T ss_conf 6899999999998607755 |
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, SGC, transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 | Back alignment and structure |
---|
Probab=99.79 E-value=1.1e-21 Score=150.62 Aligned_cols=260 Identities=13% Similarity=-0.007 Sum_probs=126.5 Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCC--EEEECCCC Q ss_conf 7379998575118999987799808899974388735889999999972234565546999730441685--56421356 Q gi|254780280|r 13 FPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLRSAFLAIATPIGDQK--SFTLTNYH 90 (348) Q Consensus 13 ~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~~~~~i~~~l~~~~~~~~~~igi~v~Gpv~~~~--~~~~~~~~ 90 (348) |+ ++||||||+|+++++|. ++++..+ .++. ++++++ +++++ .++.++|++.||+++... ....++.. T Consensus 21 m~-IGIDiGGT~ik~~~~d~-~g~i~~~--~~~~---~~~~i~-~~i~~---~~i~~Igi~g~G~~~~~~~~~~~~~~~~ 89 (287) T 2ews_A 21 MK-VGIDAGGTLIKIVQEQD-NQRTFKT--ELTK---NIDQVV-EWLNQ---QQIEKLCLTGGNAGVIAENINIPAQIFV 89 (287) T ss_dssp CE-EEEEECSSEEEEEEECS-SCEEEEE--EEGG---GHHHHH-HHHHT---SCCSEEEEESTTHHHHHTTSSSCCEECC T ss_pred EE-EEEEECHHHEEEEEEEC-CCCEEEE--EEHH---HHHHHH-HHHHH---HCCCEEEEEEECCCHHHHHEECCCCEEC T ss_conf 79-99998735589999909-9989998--6053---699999-99876---0688899980070133142072674204 Q ss_pred CCCCHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEECC Q ss_conf 66698899998289855882126543200001586553530243455766675279931762022454310588630113 Q gi|254780280|r 91 WVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPIS 170 (348) Q Consensus 91 ~~~~~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~a 170 (348) +............. +....+|....+...... . ...........++++|+|.|.........+....+ T Consensus 90 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~~g~g~G~g~~~~~~~~~~~~~~~ 157 (287) T 2ews_A 90 EFDAASQGLGILLK-EQGHDLADYIFANVGTGT---------S--LHYFDGQSQRRVGGIGTGGGMIQGLGYLLSQITDY 157 (287) T ss_dssp HHHHHHHHHHHHHH-HTTCCCSCEEEEEESSSE---------E--EEEECSSCEEEEEEESCSHHHHHHHHHHHHCCCCH T ss_pred CHHHHHHHHHHHHC-CCCCCCCCEEEEECCCCE---------E--EEEECCCCEEEEECCCCCCCEECCCCHHHCCCCCC T ss_conf 16668999998614-357764233445305432---------2--26743771698403562150540550221499972 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCC--CCHHHHHHHCCCHHHHHHH Q ss_conf 56786666766102347899998531898648775222238999999987408886436--9888998836895799999 Q gi|254780280|r 171 CEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKV--LSSKDIVSKSEDPIALKAI 248 (348) Q Consensus 171 gE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~--~~~~~~~~~~~D~~A~~~~ 248 (348) +|.||......... +.+....|.+...+.... ....... ..........+|+.+.+++ T Consensus 158 ~e~g~~~~~g~~~~---------~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 217 (287) T 2ews_A 158 KQLTDMAQHGDRNT---------IDLKVRHIYKDTEPPIPG-----------DLTAANFGHVLHHLDADFTPSNKLAAVI 217 (287) T ss_dssp HHHHHHHTTCCCTT---------TCEETTTC-------CCT-----------TSEEETTTTGGGCTTSCCCHHHHHHHHH T ss_pred HHHHHHHHCCCCCC---------CCCCHHHHHCCCCCCHHH-----------HHHCCHHCCHHHHHHHHHCCCHHHHHHH T ss_conf 47777500479864---------444202443267643002-----------2110010001244444302124689999 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHH--HHCCEEE-EECCCCHHHHHHH Q ss_conf 999999999999999974899738996567765567727648999988379837889--7388799-9578722775999 Q gi|254780280|r 249 NLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELM--RQIPTYV-ITNPYIAIAGMVS 325 (348) Q Consensus 249 ~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l--~~ipv~~-~~~~~agl~GAa~ 325 (348) +.+.++++..+.+++++++|+. |||+||++... +++ ++.+. +++ .++.+.. ...+++|.+|||. T Consensus 218 ~~~~~~l~~~i~~~~~~~~p~~-IVlgGGv~~~~-~~l-----~~~i~------~~l~~~~~~i~~~~~~~~~GalGAa~ 284 (287) T 2ews_A 218 GVVGEVVTTMAITVAREFKTEN-IVYIGSSFHNN-ALL-----RKVVE------DYTVLRGCKPYYVENGAFSGAIGALY 284 (287) T ss_dssp HHHHHHHHHHHHHHHHHTTCCE-EEEESGGGTTC-HHH-----HHHHH------HHHHHTTCEEEECTTGGGHHHHHHHH T ss_pred HHHHHHHHHHHHHHHHCCCCCE-EEEECCHHHHH-HHH-----HHHHH------HHHHHCCCEEEECCCCCHHHHHHHHH T ss_conf 9999999999998753559883-99989616602-999-----99999------99975898899679823869986998 Q ss_pred HHH Q ss_conf 873 Q gi|254780280|r 326 YIK 328 (348) Q Consensus 326 ~~r 328 (348) +++ T Consensus 285 L~k 287 (287) T 2ews_A 285 LEK 287 (287) T ss_dssp TCC T ss_pred HCC T ss_conf 658 |
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics, structural genomics consortium, SGC, allosteric enzyme; HET: GLC BG6; 2.80A {Homo sapiens} | Back alignment and structure |
---|
Probab=99.50 E-value=5.5e-11 Score=84.63 Aligned_cols=289 Identities=14% Similarity=0.073 Sum_probs=155.1 Q ss_pred CEEEEEECCCCEEEEEEECCCCEEEEEEEECCC------CCCCHHHH----HHHHHHHCC-CCCCCEEEEEEEEEEEC-- Q ss_conf 379998575118999987799808899974388------73588999----999997223-45655469997304416-- Q gi|254780280|r 14 PVLLADIGGTNVRFAILRSMESEPEFCCTVQTS------DYENLEHA----IQEVIYRKI-SIRLRSAFLAIATPIGD-- 80 (348) Q Consensus 14 ~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~------~~~~~~~~----i~~~l~~~~-~~~~~~igi~v~Gpv~~-- 80 (348) ..|++|+||||.|+++|+..++.....+.++.. ..+.|.+. |.+++.+.. ..+...+|+...=|+.- T Consensus 60 ~~LalDlGGTnlRv~~V~L~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~f~~~~~~~~~~~plGfTFSFP~~q~s 139 (445) T 3hm8_A 60 DFLALDLGGTNFRVLLVRVTTGVQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLSGQSLPLGFTFSFPCRQLG 139 (445) T ss_dssp EEEEEEESSSSEEEEEEEESSSEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCTTCCCCEEEEECSCEECSS T ss_pred EEEEEEECCCEEEEEEEEECCCEEEEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECEEEECC T ss_conf 89999827970899999986980789988878867604988999999999999999960888776622378605534057 Q ss_pred -CCEEEECCC-CC-------CCCHHHHHHH------HCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCE Q ss_conf -855642135-66-------6698899998------28985588212654320000158655353024345576667527 Q gi|254780280|r 81 -QKSFTLTNY-HW-------VIDPEELISR------MQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSR 145 (348) Q Consensus 81 -~~~~~~~~~-~~-------~~~~~~l~~~------~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~ 145 (348) +....+.+. .+ +.....|.+. +..+.+.++||-.+.-++.... ..... T Consensus 140 ~~~g~L~~wtKgf~~~~~~g~dv~~lL~~Al~rr~~~~v~v~aivNDTvgtL~a~ay~-----------------~~~~~ 202 (445) T 3hm8_A 140 LDQGILLNWTKGFKASDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYE-----------------DPRCE 202 (445) T ss_dssp TTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTT-----------------CTTEE T ss_pred CCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCCC-----------------CCCCE T ss_conf 7857999645761368877550899999999853699706999855469999842658-----------------99926 Q ss_pred EEECCCCEEEEEEEECCC--------CCCEECCCCCCCCC-----CCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHH Q ss_conf 993176202245431058--------86301135678666-----67661023478999985318986487752222389 Q gi|254780280|r 146 VIVGPGTGLGISSVIRAK--------DSWIPISCEGGHMD-----IGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLV 212 (348) Q Consensus 146 ~~ig~GtG~g~~~~~~~~--------~g~~~~agE~Gh~~-----~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~ 212 (348) +.+..|||.++++.-+.. .+...+-.|+|... ..|.+.-+..+.+ .....+.-.+|..+||+.|. T Consensus 203 iGlIlGTG~Na~y~e~~~~i~~~~~~~~~miIN~EwG~fg~~~~~~~~~T~~D~~lD~--~s~~Pg~q~fEKmiSG~YLG 280 (445) T 3hm8_A 203 IGLIVGTGTNACYMEELRNVAGVPGDSGRMCINMEWGAFGDDGSLAMLSTRFDASVDQ--ASINPGKQRFEKMISGMYLG 280 (445) T ss_dssp EEEEESSSEEEEEEEEGGGCTTSCCCSSEEEEECCGGGTTTTTTTTTTCCHHHHHHHH--TSSSTTSSTTGGGTSHHHHH T ss_pred EEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHC--CCCCCCCCCHHHHHHHCCHH T ss_conf 9999988735587401025555788877189960310247887666789735366500--79998866078775032399 Q ss_pred HHHHHHHHH-------CCCCC------CCCCCHHHHHHHCCC---------------------------HHHHHHHHHHH Q ss_conf 999999874-------08886------436988899883689---------------------------57999999999 Q gi|254780280|r 213 NIYKALCIA-------DGFES------NKVLSSKDIVSKSED---------------------------PIALKAINLFC 252 (348) Q Consensus 213 ~~y~~l~~~-------~~~~~------~~~~~~~~~~~~~~D---------------------------~~A~~~~~~~~ 252 (348) .+.+...-. ..... ...+....+..-..| .+|..+.++.+ T Consensus 281 ElvR~il~~l~~~~~lf~~~~~~~l~~~~~~~t~~ls~ie~d~~~~~~~~~~l~~~~~~~~~~d~~~lr~i~~~v~~RaA 360 (445) T 3hm8_A 281 EIVRHILLHLTSLGVLFRGQQIQRLQTRDIFKTKFLSEIESDSLALRQVRAILEDLGLPLTSDDALMVLEVCQAVSQRAA 360 (445) T ss_dssp HHHHHHHHHHHHHTSSGGGCCCGGGGSTTCSCHHHHHHHTCTTCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 99999999985502455788846555877635367776716977699999999975999998999999999999999999 Q ss_pred HHHHHHHHHHHHHHCC----C---CCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHHHHH Q ss_conf 9999999999997489----9---73899656776556772764899998837983788973887999578722775999 Q gi|254780280|r 253 EYLGRVAGDLALIFMA----R---GGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAGMVS 325 (348) Q Consensus 253 ~~lg~~i~~l~~~~~p----~---~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~GAa~ 325 (348) +..|.+++-++...++ + ..|-+-|++-.+.+. |++.+.+. ++++..+.+|.+...+|...+|||- T Consensus 361 ~L~Aa~iaai~~~~~~~~~~~~~~v~VgvdGS~~~~~p~------y~~~~~~~--l~~l~~~~~v~~~~~~Dgsg~GAAl 432 (445) T 3hm8_A 361 QLCGAGVAAVVEKIRENRGLEELAVSVGVDGTLYKLHPR------FSSLVAAT--VRELAPRCVVTFLQSEDGSGKGAAL 432 (445) T ss_dssp HHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTT------HHHHHHHH--HHHHCTTEEEEEEECSSCHHHHHHH T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECEEEECCCC------HHHHHHHH--HHHHCCCCEEEEEECCCCCHHHHHH T ss_conf 999999999999743235888773599997901752755------89999999--9997799718999866860899999 Q ss_pred HHHC Q ss_conf 8738 Q gi|254780280|r 326 YIKM 329 (348) Q Consensus 326 ~~r~ 329 (348) .+-. T Consensus 433 ~Aa~ 436 (445) T 3hm8_A 433 VTAV 436 (445) T ss_dssp HHHH T ss_pred HHHH T ss_conf 9999 |
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X* | Back alignment and structure |
---|
Probab=99.44 E-value=1.3e-09 Score=76.06 Aligned_cols=289 Identities=16% Similarity=0.105 Sum_probs=152.4 Q ss_pred EEEEEECCCCEEEEEEECCCCE-E-EEEEEE--CCC----CCCCHH----HHHHHHHHHCCC---CCCCEEEEEEEEEEE Q ss_conf 7999857511899998779980-8-899974--388----735889----999999972234---565546999730441 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESE-P-EFCCTV--QTS----DYENLE----HAIQEVIYRKIS---IRLRSAFLAIATPIG 79 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~-i-~~~~~~--~t~----~~~~~~----~~i~~~l~~~~~---~~~~~igi~v~Gpv~ 79 (348) .|++|+||||.|+++|+..+.. . ..++++ |.. .-+.|. +.|.+++.+... .+.-.+|+...=|+. T Consensus 82 fLAlDlGGTN~Rv~~V~L~g~~~~~~~~~~~~ip~~~~~g~~~~lFd~iA~~i~~fl~~~~~~~~~~~l~lGfTFSFP~~ 161 (485) T 3o8m_A 82 FLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDGVSEPLPLGFTFSYPAS 161 (485) T ss_dssp EEEEEESSSEEEEEEEEEESSSCEEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTCCSSCEEEEEEECSCEE T ss_pred EEEEEECCCCEEEEEEEECCCCCEEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC T ss_conf 99998279848999999889997688877876887873586589999999999999998544554661332367602234 Q ss_pred C---CCEEEECCC-CC-------CCCHHHHH---HHHCC--CCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCC Q ss_conf 6---855642135-66-------66988999---98289--855882126543200001586553530243455766675 Q gi|254780280|r 80 D---QKSFTLTNY-HW-------VIDPEELI---SRMQF--EDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFS 143 (348) Q Consensus 80 ~---~~~~~~~~~-~~-------~~~~~~l~---~~~~~--~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~ 143 (348) - +....+.+. .+ +....-|. ++.+. +.+.++||-.+.-.+..... .. T Consensus 162 Q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~Al~r~~~~v~v~aivNDTvgTL~a~ay~~-----------------~~ 224 (485) T 3o8m_A 162 QKKINSGVLQRWTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD-----------------PQ 224 (485) T ss_dssp CSBTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC-----------------TT T ss_pred CCCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCC-----------------CC T ss_conf 6789967998704741057867873689999999973999239999543499998644089-----------------99 Q ss_pred CEEEECCCCEEEEEEEECC---------------CCCCEECCCCCCCCCC----CCCCHHHHHHHHHHHHHCCCCCCHHH Q ss_conf 2799317620224543105---------------8863011356786666----76610234789999853189864877 Q gi|254780280|r 144 SRVIVGPGTGLGISSVIRA---------------KDSWIPISCEGGHMDI----GPSTQRDYEIFPHLTERAEGRLSAEN 204 (348) Q Consensus 144 ~~~~ig~GtG~g~~~~~~~---------------~~g~~~~agE~Gh~~~----~~~~~~~~~~~~~l~~~~g~~~~~E~ 204 (348) ..+.+..|||.+.++.-+. ..+...+-.|+|...- .|.+.-+..+.+ .....+.-.+|. T Consensus 225 ~~iGlIlGTGtNacY~e~~~~i~k~~~~~~~~~~~~~~miIN~EwG~F~~~~~~lp~T~~D~~lD~--~S~nPg~q~fEK 302 (485) T 3o8m_A 225 TKMGIIIGTGVNGAYYDVVSGIEKLEGLLPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDE--ESPRPGQQAFEK 302 (485) T ss_dssp EEEEEEESSSEEEEEEEEGGGCGGGTTTCCTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHH--HSSSTTSCHHHH T ss_pred CEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH--CCCCCCCCCCHH T ss_conf 449999757510489837104741036674446888728998555257998655778777877503--579999722113 Q ss_pred HHCCHHHHHHHHHHHH----HC---CCCCCC------CCCHHHHH-----------------HHC-C-----------CH Q ss_conf 5222238999999987----40---888643------69888998-----------------836-8-----------95 Q gi|254780280|r 205 LLSGKGLVNIYKALCI----AD---GFESNK------VLSSKDIV-----------------SKS-E-----------DP 242 (348) Q Consensus 205 ~~SG~gl~~~y~~l~~----~~---~~~~~~------~~~~~~~~-----------------~~~-~-----------D~ 242 (348) .+||+.|..+.+...- .. .....+ .+...++. ... + -. T Consensus 303 miSG~YLGElvRlvl~~l~~~~~lF~~~~~~~l~~~~~l~t~~ls~ie~d~~~~~~~~~~~l~~~~~~~~t~~d~~~vr~ 382 (485) T 3o8m_A 303 MTSGYYLGEIMRLVLLDLYDSGFIFKDQDISKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIETTVVERKLIRK 382 (485) T ss_dssp HHSTTTHHHHHHHHHHHHHHTTSSSTTSCCGGGGSTTCSCTHHHHHHHHCCCTTCHHHHHHHHHHHCCCCCHHHHHHHHH T ss_pred HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH T ss_conf 12023499999999999986155557888777727877665236777528885599999999863698899999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCC-EEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHH-------HHCCEEEEE Q ss_conf 79999999999999999999997489973-8996567765567727648999988379837889-------738879995 Q gi|254780280|r 243 IALKAINLFCEYLGRVAGDLALIFMARGG-VYISGGIPYKIIDLLRNSSFRESFENKSPHKELM-------RQIPTYVIT 314 (348) Q Consensus 243 ~A~~~~~~~~~~lg~~i~~l~~~~~p~~~-IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l-------~~ipv~~~~ 314 (348) +|..+.++.++..+.+++-++.-.+.+.. |-+-||+-.+.+ .|.+...+. +++++ ...+|.+.. T Consensus 383 I~~~V~~RAA~L~Aa~iaai~~k~~~~~~~V~vDGSv~~~~p------~f~~~~~~~--l~~ll~~~~~~~~~~~v~l~~ 454 (485) T 3o8m_A 383 LAELVGTRAARLTVCGVSAICDKRGYKTAHIAADGSVFNRYP------GYKEKAAQA--LKDIYNWDVEKMEDHPIQLVA 454 (485) T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEESHHHHHST------THHHHHHHH--HHHHHTCCCCSGGGCSEEEEE T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEECCC------CHHHHHHHH--HHHHHHCCCCCCCCCCEEEEE T ss_conf 999999879999999999999854998627999687232386------778999999--999862510126797479999 Q ss_pred CCCCHHHHHHHHHHCC Q ss_conf 7872277599987380 Q gi|254780280|r 315 NPYIAIAGMVSYIKMT 330 (348) Q Consensus 315 ~~~agl~GAa~~~r~~ 330 (348) -+|...+|||-.|-.. T Consensus 455 ~~DGSg~GAAl~Aa~a 470 (485) T 3o8m_A 455 AEDGSGVGAAIIACLT 470 (485) T ss_dssp CCCTTTHHHHHHHHHH T ss_pred ECCCCHHHHHHHHHHH T ss_conf 1285299999999999 |
>3f9m_A Glucokinase; hexokinase IV, alternative splicing, ATP- binding, diabetes mellitus, disease mutation, glycolysis, nucleotide-binding, polymorphism; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A* | Back alignment and structure |
---|
Probab=99.43 E-value=3.8e-10 Score=79.43 Aligned_cols=289 Identities=16% Similarity=0.114 Sum_probs=149.6 Q ss_pred EEEEEECCCCEEEEEEECCCCE-----EE-EEEEECC------CCCCCHH----HHHHHHHHHCC-CCCCCEEEEEEEEE Q ss_conf 7999857511899998779980-----88-9997438------8735889----99999997223-45655469997304 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESE-----PE-FCCTVQT------SDYENLE----HAIQEVIYRKI-SIRLRSAFLAIATP 77 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~-----i~-~~~~~~t------~~~~~~~----~~i~~~l~~~~-~~~~~~igi~v~Gp 77 (348) .|++|+||||.|+++|+..++. +. ..+.++. ...+.|. +.|.+++.+.. ....-.+|+...=| T Consensus 79 fLAlDlGGTNlRV~~V~L~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~~~~lplGfTFSFP 158 (470) T 3f9m_A 79 FLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFP 158 (470) T ss_dssp EEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCSSSCCEEEEEECSC T ss_pred EEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCE T ss_conf 99997189848999999789877871168777530478565158668899999999999998625566677516885150 Q ss_pred EEC---CCEEEECCC-CCC------CCHHH-HH---HHH---CCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCC Q ss_conf 416---855642135-666------69889-99---982---89855882126543200001586553530243455766 Q gi|254780280|r 78 IGD---QKSFTLTNY-HWV------IDPEE-LI---SRM---QFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRS 140 (348) Q Consensus 78 v~~---~~~~~~~~~-~~~------~~~~~-l~---~~~---~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~ 140 (348) +.- +....+.+. .+. .+..+ |. ++. ..+.+.++||-.+.-++.... T Consensus 159 ~~Q~sl~~g~L~~wtKgF~~~~~~G~dv~~lL~~al~rr~~~~v~v~aivNDTvgTLls~ay~----------------- 221 (470) T 3f9m_A 159 VRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYE----------------- 221 (470) T ss_dssp EEEEETTEEEECCCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTT----------------- T ss_pred EECCCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHCCCC----------------- T ss_conf 021667847998556742558877662799999999974899741899956769999735558----------------- Q ss_pred CCCCEEEECCCCEEEEEEEECC--------CCCCEECCCCCCCCCCCCCC-HHHHHHHHHHHHHCC--CCCCHHHHHCCH Q ss_conf 6752799317620224543105--------88630113567866667661-023478999985318--986487752222 Q gi|254780280|r 141 LFSSRVIVGPGTGLGISSVIRA--------KDSWIPISCEGGHMDIGPST-QRDYEIFPHLTERAE--GRLSAENLLSGK 209 (348) Q Consensus 141 ~~~~~~~ig~GtG~g~~~~~~~--------~~g~~~~agE~Gh~~~~~~~-~~~~~~~~~l~~~~g--~~~~~E~~~SG~ 209 (348) .....+.+..|||.+.++.-+. ..+...+-.|+|...-.+.. ....++...+-..+. +.-.+|..+||+ T Consensus 222 ~~~~~iGlIlGTG~Na~y~e~~~~i~~~~~~~~~miINtEwG~fg~~~~l~~~~T~~D~~lD~~S~~Pg~q~fEKmiSG~ 301 (470) T 3f9m_A 222 DHQCEVGMIVGTGCNACYMEEMQNVELVEGDEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGK 301 (470) T ss_dssp CTTEEEEEEESSSEEEEEEEEGGGCTTSSCCSSEEEEECCGGGTTTTSTTGGGCCHHHHHHHHHSSSTTSCHHHHTTCHH T ss_pred CCCCEEEEEEECCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEHHHHHC T ss_conf 99946999996763478960024666556888826883134457887777667787778763368999985131322014 Q ss_pred HHHHHHHHHHHH----C---CCCCC------CCCCHHHHHHHCCC---------------------------HHHHHHHH Q ss_conf 389999999874----0---88864------36988899883689---------------------------57999999 Q gi|254780280|r 210 GLVNIYKALCIA----D---GFESN------KVLSSKDIVSKSED---------------------------PIALKAIN 249 (348) Q Consensus 210 gl~~~y~~l~~~----~---~~~~~------~~~~~~~~~~~~~D---------------------------~~A~~~~~ 249 (348) .|..+.+...-. . ..... ..++...+..-..| .+|..+.+ T Consensus 302 YLGELvRlil~~l~~~~~lf~g~~~~~L~~~~~l~t~~ls~ie~d~~~~~~~~~~l~~~~~~~s~~d~~~lr~I~~~V~~ 381 (470) T 3f9m_A 302 YMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDRKQIYNILSTLGLRPSTTDCDIVRRACESVST 381 (470) T ss_dssp HHHHHHHHHHHHHHHTTCSGGGCCCTTTTSTTCSCHHHHHHHHTCCSSCHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH T ss_conf 49999999999998603445898867872789864078988862886289999999854999998999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHC------C-CCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHH Q ss_conf 999999999999999748------9-973899656776556772764899998837983788973887999578722775 Q gi|254780280|r 250 LFCEYLGRVAGDLALIFM------A-RGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAG 322 (348) Q Consensus 250 ~~~~~lg~~i~~l~~~~~------p-~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~G 322 (348) +.++..|.+++-++.... . ...|-+-|++-++.+ .|++...+. .++++.+.+|.+...+|...+| T Consensus 382 RAA~L~Aa~iaail~~~~~~~~~~~~~i~VgvdGSv~~~~p------~f~~~~~~~--l~~l~~~~~i~l~~~~DGsg~G 453 (470) T 3f9m_A 382 RAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHP------SFKERFHAS--VRRLTPSCEITFIESEEGSGRG 453 (470) T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSSEEEEEEEECHHHHHCT------THHHHHHHH--HHHHCTTEEEEEEECSSHHHHH T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEECCC------CHHHHHHHH--HHHHCCCCCEEEEECCCCHHHH T ss_conf 99999999999999985134578886189999680142586------789999999--9986799717999866862899 Q ss_pred HHHHHH Q ss_conf 999873 Q gi|254780280|r 323 MVSYIK 328 (348) Q Consensus 323 Aa~~~r 328 (348) ||-.+- T Consensus 454 AAl~Aa 459 (470) T 3f9m_A 454 AALVSA 459 (470) T ss_dssp HHHHHH T ss_pred HHHHHH T ss_conf 999999 |
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3 | Back alignment and structure |
---|
Probab=99.41 E-value=2.5e-09 Score=74.34 Aligned_cols=290 Identities=14% Similarity=0.042 Sum_probs=152.2 Q ss_pred CEEEEEECCCCEEEEEEECCCC---EEEEEEEEC--CC----CCCCHHH----HHHHHHHHCC-CCCCCEEEEEEEEEEE Q ss_conf 3799985751189999877998---088999743--88----7358899----9999997223-4565546999730441 Q gi|254780280|r 14 PVLLADIGGTNVRFAILRSMES---EPEFCCTVQ--TS----DYENLEH----AIQEVIYRKI-SIRLRSAFLAIATPIG 79 (348) Q Consensus 14 ~vL~iDIGGT~ir~glv~~~~~---~i~~~~~~~--t~----~~~~~~~----~i~~~l~~~~-~~~~~~igi~v~Gpv~ 79 (348) ..|++|+||||.|+++|+..+. .+...+.++ .. ..+.|.+ .|.+++.+.. ....-.+|+...=|+. T Consensus 69 ~~LAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~ip~~~~~~~~~~lFd~iA~~i~~fl~~~~~~~~~l~lGfTFSFP~~ 148 (451) T 1bdg_A 69 NFLALDLGGTNYRVLSVTLEGKGKSPRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMKDKKFDLGFTFSFPCV 148 (451) T ss_dssp EEEEEEESSSSEEEEEEEECC-CCCCEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCCSSCEEEEEEECSCEE T ss_pred EEEEEECCCCCEEEEEEEECCCCCEEEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECEEE T ss_conf 99999808984899999983899457999998608888725989999999999999999855875545656528703402 Q ss_pred C--CCEEEECCC--CC-------CCCHHHHHHHH-----CCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCC Q ss_conf 6--855642135--66-------66988999982-----89855882126543200001586553530243455766675 Q gi|254780280|r 80 D--QKSFTLTNY--HW-------VIDPEELISRM-----QFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFS 143 (348) Q Consensus 80 ~--~~~~~~~~~--~~-------~~~~~~l~~~~-----~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~ 143 (348) - -....+..+ .+ +.....|.+.+ ..+.+.++||-.+.-++.... ... T Consensus 149 Q~si~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~~~v~v~aivNDTvgTL~a~ay~-----------------~~~ 211 (451) T 1bdg_A 149 QKGLTHATLVRWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALE-----------------DPK 211 (451) T ss_dssp EETTTEEEECCCCTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTT-----------------CTT T ss_pred ECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCC-----------------CCC T ss_conf 057785699843675046786777378999999986499827999956779999841648-----------------999 Q ss_pred CEEEECCCCEEEEEEEECC---------CCCCEECCCCCCCCCC-----CCCCHHHHHHHHHHHHHCCCCCCHHHHHCCH Q ss_conf 2799317620224543105---------8863011356786666-----7661023478999985318986487752222 Q gi|254780280|r 144 SRVIVGPGTGLGISSVIRA---------KDSWIPISCEGGHMDI-----GPSTQRDYEIFPHLTERAEGRLSAENLLSGK 209 (348) Q Consensus 144 ~~~~ig~GtG~g~~~~~~~---------~~g~~~~agE~Gh~~~-----~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~ 209 (348) ..+.+..|||.+.++.-+. ..+...+-.|+|...- .|.+.-+..+.. .....+.-.+|..+||+ T Consensus 212 ~~iGlIlGTG~Na~y~e~~~~i~k~~~~~~~~miIN~EwG~fg~~~~~~lp~T~~D~~lD~--~S~~pg~q~fEKmiSG~ 289 (451) T 1bdg_A 212 CAVGLIVGTGTNVAYIEDSSKVELMDGVKEPEVVINTEWGAFGEKGELDCWRTQFDKSMDI--DSLHPGKQLYEKMVSGM 289 (451) T ss_dssp EEEEEEESSSEEEEEEEETTTCGGGCSCSSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHH--TSSSTTSCTTHHHHSHH T ss_pred CEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHH--CCCCCCCCCHHHHHCCC T ss_conf 2699999787015997312016544578998379951020358876556788867887644--58998974024652114 Q ss_pred HHHHHHHHHHHH----CC---CCCCC------CCCHHHH-----------------HHHC-----CC--------HHHHH Q ss_conf 389999999874----08---88643------6988899-----------------8836-----89--------57999 Q gi|254780280|r 210 GLVNIYKALCIA----DG---FESNK------VLSSKDI-----------------VSKS-----ED--------PIALK 246 (348) Q Consensus 210 gl~~~y~~l~~~----~~---~~~~~------~~~~~~~-----------------~~~~-----~D--------~~A~~ 246 (348) .|..+.+...-. .. ....+ .+...++ .... -+ .+|.. T Consensus 290 YLGEl~R~il~~l~~~~~lf~g~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~~l~~~~~~~~~s~~d~~~lr~i~~~ 369 (451) T 1bdg_A 290 YLGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACEM 369 (451) T ss_dssp HHHHHHHHHHHHHHHTTSSGGGCCCSGGGSTTCSCTTHHHHHTTCCTTCCHHHHHHHHHTSCCSSCCHHHHHHHHHHHHH T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH T ss_conf 49999999999998664666888857763887645377887744883789999999875059899999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCC-EEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHH-HHCCEEEEECCCCHHHHHH Q ss_conf 9999999999999999997489973-8996567765567727648999988379837889-7388799957872277599 Q gi|254780280|r 247 AINLFCEYLGRVAGDLALIFMARGG-VYISGGIPYKIIDLLRNSSFRESFENKSPHKELM-RQIPTYVITNPYIAIAGMV 324 (348) Q Consensus 247 ~~~~~~~~lg~~i~~l~~~~~p~~~-IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l-~~ipv~~~~~~~agl~GAa 324 (348) +.++.++..|.+++-++...+.... |-+-|++-.+.+. |++...+. .+.+. ...+|.+..-+|...+||| T Consensus 370 I~~RaA~L~Aa~iaai~~~~~~~~~~V~vdGSv~~~~p~------f~~~~~~~--l~~l~~~~~~i~l~~~~DGSg~GAA 441 (451) T 1bdg_A 370 VVKRAAYLAGAGIACILRRINRSEVTVGVDGSLYKFHPK------FCERMTDM--VDKLKPKNTRFCLRLSEDGSGKGAA 441 (451) T ss_dssp HHHHHHHHHHHHHHHHHHHHCCSEEEEEEESHHHHHCTT------HHHHHHHH--HHHHSCTTCEEEEEECTTHHHHHHH T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCC------HHHHHHHH--HHHHCCCCCEEEEEEEECCHHHHHH T ss_conf 999999999999999997518983599996814116842------89999999--9986389955999990087089999 Q ss_pred HHHHCC Q ss_conf 987380 Q gi|254780280|r 325 SYIKMT 330 (348) Q Consensus 325 ~~~r~~ 330 (348) -.|-.- T Consensus 442 l~Aa~~ 447 (451) T 1bdg_A 442 AIAASC 447 (451) T ss_dssp HHHTTC T ss_pred HHHHHH T ss_conf 999997 |
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein structure initiative; 2.30A {Porphyromonas gingivalis W83} SCOP: c.55.1.5 c.55.1.5 | Back alignment and structure |
---|
Probab=99.36 E-value=6.9e-10 Score=77.82 Aligned_cols=265 Identities=14% Similarity=0.080 Sum_probs=122.2 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCCCC-CCHHHHHHHH---HHH---CCCCCCCEEEEEEEEEEECCCEEEEC Q ss_conf 7999857511899998779980889997438873-5889999999---972---23456554699973044168556421 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSDY-ENLEHAIQEV---IYR---KISIRLRSAFLAIATPIGDQKSFTLT 87 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~-~~~~~~i~~~---l~~---~~~~~~~~igi~v~Gpv~~~~~~~~~ 87 (348) ||++|-||||+++.|++ ++..+...+..+++.+ .+.+.+.+.+ +.+ .....+..++++.+|- .... T Consensus 2 iL~vDgGGTKT~~~l~~-~g~~i~~~~~~~~N~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~~~aG~-~~~~----- 74 (291) T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGKSLGRFQTSGINPFQQDRNEIDTALRSEVLPAIGQKASSIRAVYFYGAGC-TPAK----- 74 (291) T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEECCCTTTSCHHHHHHHHTTTTHHHHTTSTTTCCEEEEEETTC-CTTT----- T ss_pred EEEEEECHHHEEEEEEC-CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC-CHHH----- T ss_conf 89999363257899998-9978999974888820179999999999999999863688841699998337-5333----- Q ss_pred CCCCCCCHHHHHHHH-CCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCC Q ss_conf 356666988999982-8985588212654320000158655353024345576667527993176202245431058863 Q gi|254780280|r 88 NYHWVIDPEELISRM-QFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSW 166 (348) Q Consensus 88 ~~~~~~~~~~l~~~~-~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~ 166 (348) -......+.+.+ ...++.+.||..+..++... ....+++..|||..+..... .|. T Consensus 75 ---~~~~~~~l~~~~~~~~~v~V~nD~~~a~~aa~~-------------------~~~GivvIaGTGSi~~~~~~--~g~ 130 (291) T 1zbs_A 75 ---APMLNEALDSMLPHCDRIEVAGDMLGAARALCG-------------------DSEGIACILGTGSNSCLFDG--REI 130 (291) T ss_dssp ---HHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTT-------------------TSCEEEEEESSSEEEEEECS--SSE T ss_pred ---HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCC-------------------CCCEEEEECCCCEEEEEEEC--CCC T ss_conf ---199999999864347729995486999997336-------------------89639998589826999978--987 Q ss_pred EECCCCCCCCCCCCCCHHH---HHHHHHHHHHCCCCCCHHHHHCCHHHHH--HHHHHHHHCCCCCCCCCCHHHHHHHCCC Q ss_conf 0113567866667661023---4789999853189864877522223899--9999987408886436988899883689 Q gi|254780280|r 167 IPISCEGGHMDIGPSTQRD---YEIFPHLTERAEGRLSAENLLSGKGLVN--IYKALCIADGFESNKVLSSKDIVSKSED 241 (348) Q Consensus 167 ~~~agE~Gh~~~~~~~~~~---~~~~~~l~~~~g~~~~~E~~~SG~gl~~--~y~~l~~~~~~~~~~~~~~~~~~~~~~D 241 (348) ..-.|-+||..-...+.-. ..+...++...+ ..-.+.+..-.++.. ...........+..-..-+..+.+.++| T Consensus 131 ~~r~GGwG~llGDeGSG~wiG~~al~~~l~~~d~-~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~A~~v~~~~~d 209 (291) T 1zbs_A 131 KANVSPLGYILGDEGSGAVLGRLFIGSLLKGQMP-EGLCEAFLQEYGLTSADIIESVYRKPFPNRFLAGFSPFIAQHLDI 209 (291) T ss_dssp EEECCCCHHHHCCTTSHHHHHHHHHHHHHTTCSC-TTHHHHHHHHTTCCHHHHHHHHHHSSCHHHHHHTTHHHHHTTTTS T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCC T ss_conf 7882378888799830889999999999976122-679999999978896888999985579824134756889983999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHH Q ss_conf 57999999999999999999999748997-38996567765567727648999988379837889738879995787227 Q gi|254780280|r 242 PIALKAINLFCEYLGRVAGDLALIFMARG-GVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAI 320 (348) Q Consensus 242 ~~A~~~~~~~~~~lg~~i~~l~~~~~p~~-~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl 320 (348) +.|.+++++.+..|...+ ...+.... -|++.|||+..+.+++ + +.++...+.+..-..-++ T Consensus 210 ~~a~~ii~~a~~~l~~~~---~~~~~~~~~pv~~~Ggva~~~~~~l-----~----------~~l~~~~i~~~~i~~~Pi 271 (291) T 1zbs_A 210 PAVYSLVQNSFDDFLVRN---VLRYNRPDLPLHFIGSVAFHYREVL-----S----------SVIKKRGLTLGSVLQSPM 271 (291) T ss_dssp HHHHHHHHHHHHHHHHHH---TGGGCCTTSCEEEESHHHHHTHHHH-----H----------HHHHHTTCCEEEEESCSH T ss_pred HHHHHHHHHHHHHHHHHH---HHHCCCCCCCEEEEECHHHHHHHHH-----H----------HHHHHCCCEECCCCCCHH T ss_conf 699999999999999999---9835789841999904699889999-----9----------999985987525467835 Q ss_pred HHHHHHHHC Q ss_conf 759998738 Q gi|254780280|r 321 AGMVSYIKM 329 (348) Q Consensus 321 ~GAa~~~r~ 329 (348) .|+..|-.+ T Consensus 272 ~Glv~yh~~ 280 (291) T 1zbs_A 272 EGLIQYHHN 280 (291) T ss_dssp HHHHHHHHH T ss_pred HHHHHHHHH T ss_conf 899999985 |
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A | Back alignment and structure |
---|
Probab=99.36 E-value=7e-09 Score=71.61 Aligned_cols=287 Identities=8% Similarity=-0.020 Sum_probs=153.0 Q ss_pred EEEEEECCCCEEEEEEECCCCEE--EEEEEECCC------CCCCHH----HHHHHHHHHCCC--CCCCEEEEEEEEEEEC Q ss_conf 79998575118999987799808--899974388------735889----999999972234--5655469997304416 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEP--EFCCTVQTS------DYENLE----HAIQEVIYRKIS--IRLRSAFLAIATPIGD 80 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i--~~~~~~~t~------~~~~~~----~~i~~~l~~~~~--~~~~~igi~v~Gpv~~ 80 (348) .|++|+||||.|+.+|+..+... ...++++.. ..+.|. +.|.+++++... ...-.+|+...=|+.- T Consensus 63 fLAlDlGGTNlRV~~V~L~g~~~~~i~~~~~~ip~~~~~gt~~~LFd~IA~~i~~fl~~~~~~~~~~lplGfTFSFP~~Q 142 (457) T 2yhx_A 63 FLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSSXAGSVPLGFTFXEAGAK 142 (457) T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSSCSSCEEEEEECCSCCCC T ss_pred EEEEEECCCCEEEEEEEEECCCCEEEEEEEEECCHHHCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEE T ss_conf 99998289868999999818997788578998887865698778646558889999851154544435505797163688 Q ss_pred CCEEEECCCCCC---------CCHHHHHHH-----HCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEE Q ss_conf 855642135666---------698899998-----289855882126543200001586553530243455766675279 Q gi|254780280|r 81 QKSFTLTNYHWV---------IDPEELISR-----MQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRV 146 (348) Q Consensus 81 ~~~~~~~~~~~~---------~~~~~l~~~-----~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~ 146 (348) .....-....|. ....-|.+. .....+.++||-.+.-.+.... .....+ T Consensus 143 ~si~~g~L~~wtKgf~~~~g~dv~~lL~~al~r~~~~v~vvAivNDTvgTL~a~ay~-----------------d~~~~i 205 (457) T 2yhx_A 143 EXVIKGQITXQAXAFSLAXLXKLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYT-----------------DAXIKM 205 (457) T ss_dssp SBTTCCBCSSCCTTCCCSSCSSBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHH-----------------CTTEEE T ss_pred EECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCC-----------------CCCCEE T ss_conf 762773699974244555556589999888875177540478874366973223228-----------------988469 Q ss_pred EECCCCEEEEEEEECC-------------CCCCEECCCCCCCCCC----CCCCHHHHHHHHHHHHHCCCCCCHHHHHCCH Q ss_conf 9317620224543105-------------8863011356786666----7661023478999985318986487752222 Q gi|254780280|r 147 IVGPGTGLGISSVIRA-------------KDSWIPISCEGGHMDI----GPSTQRDYEIFPHLTERAEGRLSAENLLSGK 209 (348) Q Consensus 147 ~ig~GtG~g~~~~~~~-------------~~g~~~~agE~Gh~~~----~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~ 209 (348) .+..|||.+.++.-+. ..+...+-.|+|...- .|.+.-+..+.+ ....+.-.+|..+||+ T Consensus 206 GlIlGTG~NacY~E~~~~i~k~~~~~~~~~~~~miINtEwG~Fd~~~~~lp~T~~D~~lD~---~SnpG~Q~fEKMiSG~ 282 (457) T 2yhx_A 206 GIIFGSGVNAAYWCDSTXIGDAADGGXXGGAGXMXICCDQSSFRKAFPSLPQIXYLXTLNX---XSPXAXKTFXKNSXAK 282 (457) T ss_dssp EEEESSSEEEEEEECGGGSSCTTSCSSSCSSCCEEEECCCTTTTTTCSSSCCCHHHHHHHH---HSSCSCCHHHHHHCGG T ss_pred EEEEECCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHCCC T ss_conf 9999467105899764463000245778877706998212566888756877600134445---6766304678876155 Q ss_pred HHHHHHHHHHHHC---CC----C-----CCCCCCHHHHHHH----CC--------------------C-----HHHHHHH Q ss_conf 3899999998740---88----8-----6436988899883----68--------------------9-----5799999 Q gi|254780280|r 210 GLVNIYKALCIAD---GF----E-----SNKVLSSKDIVSK----SE--------------------D-----PIALKAI 248 (348) Q Consensus 210 gl~~~y~~l~~~~---~~----~-----~~~~~~~~~~~~~----~~--------------------D-----~~A~~~~ 248 (348) .|..+.+...-.. +. . ....+...++..- .. | .+|..+. T Consensus 283 YLGELvRlvl~~l~~~g~lf~~~~~~L~~~~~l~T~~lS~ie~d~~~~l~~~~~~l~~~~~~~~t~~d~~~vr~i~~~V~ 362 (457) T 2yhx_A 283 NXGQSLRDVLMXFKXXGQXHXXXAXSFXAANVENTSYPAKIQKLPHFDLRXXXDLFXGDQGIAXKTXMKXVVRRXLFLIA 362 (457) T ss_dssp GHHHHHHHHHHHHHHTTSSSSSCCCSCCSTTCSCTHHHHHHHHCCSSSCHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHH T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH T ss_conf 31799999999998627432457665425777683048774408885167899998876187765467899999998885 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCC-EEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHH-------HCCEEEEECCCCHH Q ss_conf 99999999999999997489973-89965677655677276489999883798378897-------38879995787227 Q gi|254780280|r 249 NLFCEYLGRVAGDLALIFMARGG-VYISGGIPYKIIDLLRNSSFRESFENKSPHKELMR-------QIPTYVITNPYIAI 320 (348) Q Consensus 249 ~~~~~~lg~~i~~l~~~~~p~~~-IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~-------~ipv~~~~~~~agl 320 (348) ++.++..|.+++-++...+.+.. |-+.|++ .+ .+.|.+...+. +++++. .-+|.+...+|-.- T Consensus 363 ~RAArL~Aa~iaai~~k~g~~~~~VgvDGSv-~k------yP~F~~~~~~~--l~~ll~~~~~~~~~~~i~l~~a~DGSG 433 (457) T 2yhx_A 363 AYAFRLVVCXIXAICQKKGYSSGHIAAXGSX-RS------YSGFSXNSATX--NXNIYGWPQSAXXSKPIXITPAIDGXG 433 (457) T ss_dssp HHHHHHHTHHHHHHHHHHTCSSEEEEEESTT-TT------STTHHHHHHHH--HHHHHCCCCSSGGGSSEEEEECCCTTT T ss_pred HHEEEHHHHHHHHHHHHCCCCCEEEEEECCC-CC------CCCHHHHHHHH--HHHHHCCCCCCCCCCCEEEEECCCCCC T ss_conf 5413699979879983149984599997885-65------98628999999--999857755444576357898899758 Q ss_pred HHHHHHHHCC Q ss_conf 7599987380 Q gi|254780280|r 321 AGMVSYIKMT 330 (348) Q Consensus 321 ~GAa~~~r~~ 330 (348) +|||-.+-.. T Consensus 434 vGAAliAA~a 443 (457) T 2yhx_A 434 AASXVIXSIA 443 (457) T ss_dssp HHHHHHHHHH T ss_pred CCHHHHHHHH T ss_conf 1588999997 |
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* | Back alignment and structure |
---|
Probab=99.35 E-value=2.6e-09 Score=74.26 Aligned_cols=287 Identities=13% Similarity=0.095 Sum_probs=150.2 Q ss_pred CEEEEEECCCCEEEEEEECCCC--E-E-EEEEEECCC------CCCCHH----HHHHHHHHHCC-CCCCCEEEEEEEEEE Q ss_conf 3799985751189999877998--0-8-899974388------735889----99999997223-456554699973044 Q gi|254780280|r 14 PVLLADIGGTNVRFAILRSMES--E-P-EFCCTVQTS------DYENLE----HAIQEVIYRKI-SIRLRSAFLAIATPI 78 (348) Q Consensus 14 ~vL~iDIGGT~ir~glv~~~~~--~-i-~~~~~~~t~------~~~~~~----~~i~~~l~~~~-~~~~~~igi~v~Gpv 78 (348) ..|++|+||||.|+++|+..+. . + ...+.++.. ..+.|- +.|.+++++.. ..+...+|+...=|+ T Consensus 79 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~ip~~~~~~~~~~LFd~IA~~i~~fl~~~~~~~~~lplGfTFSFP~ 158 (917) T 1cza_N 79 DFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFTFSFPC 158 (917) T ss_dssp EEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCTTSCCCEEEEECSCE T ss_pred EEEEEECCCCEEEEEEEEECCCCCCCEEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEE T ss_conf 89999707974999999974898863788886126886784589999999999999999986277777763179961701 Q ss_pred ECCCEEEECCCCCC----C------CHHH-H----HHH--HCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC Q ss_conf 16855642135666----6------9889-9----998--2898558821265432000015865535302434557666 Q gi|254780280|r 79 GDQKSFTLTNYHWV----I------DPEE-L----ISR--MQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSL 141 (348) Q Consensus 79 ~~~~~~~~~~~~~~----~------~~~~-l----~~~--~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~ 141 (348) .-.....-....|. . +... | .++ +..+.+.++||-.+.-.+.... . T Consensus 159 ~Q~sl~~g~L~~wtKgF~~~~v~G~dv~~lL~~Al~r~~~~~v~v~aivNDTvgTL~s~ay~-----------------~ 221 (917) T 1cza_N 159 QQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYD-----------------D 221 (917) T ss_dssp ECSSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHH-----------------C T ss_pred ECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHCCCC-----------------C T ss_conf 22677867998733555577767841899999999973788713899953558878740458-----------------9 Q ss_pred CCCEEEECCCCEEEEEEEECC--------CCCCEECCCCCCCCCCC-----CCCHHHHHHHHHHHHHCCCCCCHHHHHCC Q ss_conf 752799317620224543105--------88630113567866667-----66102347899998531898648775222 Q gi|254780280|r 142 FSSRVIVGPGTGLGISSVIRA--------KDSWIPISCEGGHMDIG-----PSTQRDYEIFPHLTERAEGRLSAENLLSG 208 (348) Q Consensus 142 ~~~~~~ig~GtG~g~~~~~~~--------~~g~~~~agE~Gh~~~~-----~~~~~~~~~~~~l~~~~g~~~~~E~~~SG 208 (348) ....+.+..|||.+.++.-+. ..+...+-.|+|...-. |.+.-+..+.+ .....+.-.+|..+|| T Consensus 222 ~~~~iGlI~GTG~Nacy~e~~~~i~~~~~~~~~miINtEwG~fg~~~~l~~~~T~~D~~lD~--~S~~Pg~Q~fEKmiSG 299 (917) T 1cza_N 222 QHCEVGLIIGTGTNACYMEELRHIDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDRAIDA--YSLNPGKQLFEKMVSG 299 (917) T ss_dssp TTEEEEEEESSSEEEEEEEEGGGCTTSSCCSSEEEEECCGGGTTTTTTTTTTCCHHHHHHHH--TSSSTTSSTTHHHHSH T ss_pred CCCEEEEEEECCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHH--CCCCCCCEEHHHHHHH T ss_conf 98069999827677899835033453458887389985443257777666788847799863--6899896033566554 Q ss_pred HHHHHHHHHHHHH----C---CCCCC------CCCCHHHHHHHCC---------------------------CHHHHHHH Q ss_conf 2389999999874----0---88864------3698889988368---------------------------95799999 Q gi|254780280|r 209 KGLVNIYKALCIA----D---GFESN------KVLSSKDIVSKSE---------------------------DPIALKAI 248 (348) Q Consensus 209 ~gl~~~y~~l~~~----~---~~~~~------~~~~~~~~~~~~~---------------------------D~~A~~~~ 248 (348) +.|..+.+...-. . ..... ..+...++..-.. -.+|..+. T Consensus 300 ~YLGElvRlil~~l~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~~~~~~~~~~~~l~~~~~~~s~~d~~~vr~i~~~V~ 379 (917) T 1cza_N 300 MYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPSDDDCVSVQHVCTIVS 379 (917) T ss_dssp HHHHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTSSCHHHHHHHTCTTTHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH T ss_conf 02999999999999870345677788877278875706899875599128899999986499989999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHC-----C--CCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHH Q ss_conf 9999999999999999748-----9--97389965677655677276489999883798378897388799957872277 Q gi|254780280|r 249 NLFCEYLGRVAGDLALIFM-----A--RGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIA 321 (348) Q Consensus 249 ~~~~~~lg~~i~~l~~~~~-----p--~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~ 321 (348) .+.++..|.+++-+..... | ...|-+.||+-.+.+ .|.+.+.+. +.+++..-+|.+...+|-..+ T Consensus 380 ~RAA~LvAa~i~ail~~~~~~~~~~~~~~~VavdGSv~~~~P------~f~~~~~~~--l~~l~~~~~v~~~~~~DGSg~ 451 (917) T 1cza_N 380 FRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHP------QYSRRFHKT--LRRLVPDSDVRFLLSESGSGK 451 (917) T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEEECHHHHHCS------SHHHHHHHH--HHHHCTTEEEEEEECTTCHHH T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEECCC------CHHHHHHHH--HHHHCCCCCEEEEECCCCCHH T ss_conf 999999999999999973213589987669999084201485------889999999--999769984699992787578 Q ss_pred HHHHHH Q ss_conf 599987 Q gi|254780280|r 322 GMVSYI 327 (348) Q Consensus 322 GAa~~~ 327 (348) |||-.| T Consensus 452 GAAl~A 457 (917) T 1cza_N 452 GAAMVT 457 (917) T ss_dssp HHHHHH T ss_pred HHHHHH T ss_conf 899988 |
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5 | Back alignment and structure |
---|
Probab=99.21 E-value=3.5e-10 Score=79.63 Aligned_cols=259 Identities=14% Similarity=0.052 Sum_probs=124.5 Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCCC----CCCHHHHHHHHHHH-CCCCCCCEEEEEEEEEEECCCEEEECCC Q ss_conf 799985751189999877998088999743887----35889999999972-2345655469997304416855642135 Q gi|254780280|r 15 VLLADIGGTNVRFAILRSMESEPEFCCTVQTSD----YENLEHAIQEVIYR-KISIRLRSAFLAIATPIGDQKSFTLTNY 89 (348) Q Consensus 15 vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~----~~~~~~~i~~~l~~-~~~~~~~~igi~v~Gpv~~~~~~~~~~~ 89 (348) ||+||-||||+++.++| ++..+...+.-+++. .+...+.|.+.+.+ .....+..+.++.+|- .... T Consensus 2 IL~IDgGGTKT~~vl~d-~g~~i~~~~~gg~Np~~~~~~~~~~~i~~~i~~~~~~~~i~~~~~~~aG~-~~~~------- 72 (291) T 1zxo_A 2 ILIADSGSTKTDWCVVL-NGAVIKRLGTKGINPFFQSEEEIQQKLTASLLPQLPEGKFNAVYFYGAGC-TPEK------- 72 (291) T ss_dssp --CEECCTTCEEEEEEC-SSSEEEEEEECCCCTTTSCSTTTTTTTTC-------------CEEECTTC-CTTT------- T ss_pred EEEEEECHHHEEEEEEE-CCCEEEEEECCCCCCC |