254780347

 Score =  354 bits (909), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 165/200 (82%), Positives = 187/200 (93%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVD 60
           MFTGIVTDIG+IIA+ PIAKG+RLR+MTSY+TS M++GCSIAHAGICLTVV+LS+E SV+
Sbjct: 1   MFTGIVTDIGQIIAIMPIAKGLRLRLMTSYDTSTMRVGCSIAHAGICLTVVQLSDESSVN 60

Query: 61  NWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIG 120
           NWYEVE+W ETNR+TN+ +W IGTF+NLERS+KLGD LDGHLVSGH+DGTVEILF+DF G
Sbjct: 61  NWYEVEIWEETNRLTNVVAWEIGTFVNLERSMKLGDELDGHLVSGHVDGTVEILFMDFFG 120

Query: 121 DSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVG 180
           DS+YCRLSLPHNLE+FIAVKGSVCLNGVSLTVNLVG NFFDVLLIRHTIE+TTW MHK G
Sbjct: 121 DSVYCRLSLPHNLEKFIAVKGSVCLNGVSLTVNLVGDNFFDVLLIRHTIEQTTWSMHKTG 180

Query: 181 DLINIEVDSMMRYIARLYAL 200
           DLINIEVDSMMRYI+RL A 
Sbjct: 181 DLINIEVDSMMRYISRLCAF 200

Species: Candidatus Liberibacter solanacearum
Genus: Candidatus Liberibacter
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  233 bits (595), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 112/204 (54%), Positives = 143/204 (70%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVD 60
           MFTGI+TDIG +  +TP+ +G++LRV T+Y+   + LG S+AHAGICLTV  L E  S +
Sbjct: 1   MFTGIITDIGTVEKVTPLEEGIKLRVATNYDPQTIDLGASVAHAGICLTVTSLPEAGSNE 60

Query: 61  NWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIG 120
            W+EVE W E  R+T IA W  GT INLERS+K+GD L GH+VSGH+DG  EIL ++  G
Sbjct: 61  RWFEVEAWEEALRLTTIADWREGTRINLERSLKIGDELGGHIVSGHVDGKAEILAVEAEG 120

Query: 121 DSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVG 180
           +++  RL  P +L +FIA KGSV L+G SLTVN V    FDVLLIRH++E TTW   K G
Sbjct: 121 EAVRFRLRAPEHLAKFIAPKGSVALDGTSLTVNKVDGVEFDVLLIRHSLEVTTWGERKSG 180

Query: 181 DLINIEVDSMMRYIARLYALNTSQ 204
           DL+N EVD+M RY ARL      +
Sbjct: 181 DLVNFEVDTMARYAARLAEFPAPK 204

Species: Sinorhizobium meliloti
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  233 bits (593), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 111/204 (54%), Positives = 143/204 (70%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVD 60
           MFTGI+TDIG +  +TP+ +G++LRV T+Y+   + LG S+AHAGICLTV  L E  S +
Sbjct: 1   MFTGIITDIGTVEKVTPLEEGIKLRVATNYDPQTIDLGASVAHAGICLTVTSLPEAGSNE 60

Query: 61  NWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIG 120
            W+EVE W E  R+T IA W  GT INLERS+K+GD L GH+VSGH+DG  EIL ++  G
Sbjct: 61  RWFEVEAWEEALRLTTIADWREGTRINLERSLKIGDELGGHIVSGHVDGKAEILAVEAEG 120

Query: 121 DSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVG 180
           +++  RL  P +L +F+A KGSV L+G SLTVN V    FDVLLIRH++E TTW   K G
Sbjct: 121 EAVRFRLRAPEHLAKFVAPKGSVALDGTSLTVNKVDGVEFDVLLIRHSLEVTTWGERKSG 180

Query: 181 DLINIEVDSMMRYIARLYALNTSQ 204
           DL+N EVD+M RY ARL      +
Sbjct: 181 DLVNFEVDTMARYAARLAEFPAPK 204

Species: Sinorhizobium meliloti
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  232 bits (592), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 110/197 (55%), Positives = 142/197 (72%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVD 60
           MFTGI+TDIG +  +TP+ +G +LRV T+Y+   + +G SIAHAG+CLTV  L E  S +
Sbjct: 1   MFTGIITDIGTVEKVTPLREGAKLRVATNYDPKTIDMGASIAHAGVCLTVTALPEAGSNE 60

Query: 61  NWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIG 120
            W+EVE W E  R+T IA+W  GT INLERS+K+GD L GH+VSGH+DG  EIL ++  G
Sbjct: 61  RWFEVEAWEEALRLTTIAAWREGTRINLERSLKIGDELGGHIVSGHVDGKAEILAVEPEG 120

Query: 121 DSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVG 180
           D++  RL  P +L +F+A KGSV L+G SLTVN V    FDVLLIRH+++ TTW   K G
Sbjct: 121 DAVRFRLRAPEHLAKFVAPKGSVALDGTSLTVNKVDGVEFDVLLIRHSLDVTTWGERKAG 180

Query: 181 DLINIEVDSMMRYIARL 197
           DL+N EVD+M RY ARL
Sbjct: 181 DLVNFEVDTMARYAARL 197

Species: Sinorhizobium medicae
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  230 bits (587), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 109/203 (53%), Positives = 143/203 (70%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVD 60
           MFTGIVTDIG I +++P+ +G++LRV TSY+ + + +G SI+H+GICLTV  L +E S  
Sbjct: 2   MFTGIVTDIGTIESVSPLKEGIKLRVATSYDPATIDMGASISHSGICLTVTGLPQEGSNG 61

Query: 61  NWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIG 120
            W+EVE W E  R+T I +W  G+ INLERS+K+GD L GH+VSGH+DG  EIL +   G
Sbjct: 62  RWFEVEAWEEALRLTTIGAWQEGSRINLERSLKIGDELGGHIVSGHVDGKAEILSVTAEG 121

Query: 121 DSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVG 180
           D+   RL  P +L +F+A KGS+ L+G SLTVN V    FDVLLIRHT+E TTW   K G
Sbjct: 122 DATRYRLRAPEHLAKFVAPKGSIALDGTSLTVNAVDGTDFDVLLIRHTLEVTTWGDRKAG 181

Query: 181 DLINIEVDSMMRYIARLYALNTS 203
           D +N EVD+M RY ARL    ++
Sbjct: 182 DFVNFEVDTMARYAARLAEFPST 204

Species: Rhizobium leguminosarum
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  229 bits (585), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 108/203 (53%), Positives = 142/203 (69%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVD 60
           MFTGIVTD+G + +++P+ +G+RLRV T+Y+ S + +G SI+H+GICLTV  L  E S  
Sbjct: 1   MFTGIVTDVGTVESVSPLKEGIRLRVATAYDPSTIDMGASISHSGICLTVTGLPAEGSNG 60

Query: 61  NWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIG 120
            W+EVE W E  R+T I +W  G+ INLERS+K+GD L GH+VSGH+DG  EIL +   G
Sbjct: 61  RWFEVEAWEEALRLTTIGTWQQGSRINLERSLKIGDELGGHIVSGHVDGKAEILSVTSEG 120

Query: 121 DSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVG 180
           D+   RL  P +L +F+A KGS+ L+G SLTVN V    FDVLLIRHT+E TTW   K G
Sbjct: 121 DATRYRLRAPEHLAKFVAPKGSIALDGTSLTVNAVDGTDFDVLLIRHTLEVTTWGDRKAG 180

Query: 181 DLINIEVDSMMRYIARLYALNTS 203
           D +N EVD+M RY ARL    ++
Sbjct: 181 DFVNFEVDTMARYAARLAEFPSA 203

Species: Rhizobium etli
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  229 bits (583), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 107/203 (52%), Positives = 143/203 (70%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVD 60
           MFTGIVTD+G + +++P+ +G+RLRV T+Y+ + + +G SI+H+GICLTV  L +E S  
Sbjct: 1   MFTGIVTDVGTVESVSPLKEGIRLRVATAYDPATIDMGASISHSGICLTVTGLPDEGSNG 60

Query: 61  NWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIG 120
            W+EVE W E  R+T I +W  G+ INLERS+K+GD L GH+VSGH+DG  EIL +   G
Sbjct: 61  RWFEVEAWEEALRLTTIGTWREGSRINLERSLKIGDELGGHIVSGHVDGKAEILSVTSEG 120

Query: 121 DSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVG 180
           D+   RL  P +L +F+A KGS+ L+G SLTVN V    FDVLLIRHT+E TTW   K G
Sbjct: 121 DATRYRLRAPEHLAKFVAPKGSIALDGTSLTVNAVDGTDFDVLLIRHTLEVTTWGERKAG 180

Query: 181 DLINIEVDSMMRYIARLYALNTS 203
           D +N EVD+M RY ARL    ++
Sbjct: 181 DFVNFEVDTMARYAARLAEFPSA 203

Species: Rhizobium leguminosarum
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  229 bits (583), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 108/203 (53%), Positives = 142/203 (69%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVD 60
           MFTGIVTD+G +  ++P+ +G+RLRV T+Y+ S + +G SI+H+GICLTV  L +E S  
Sbjct: 1   MFTGIVTDVGTVEFVSPLKEGIRLRVATAYDPSTIDMGASISHSGICLTVTGLPDEGSNG 60

Query: 61  NWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIG 120
            W+EVE W E  R+T I +W  G+ INLERS+K+GD L GH+VSGH+DG  EIL +   G
Sbjct: 61  RWFEVEAWEEALRLTTIGTWQQGSRINLERSLKIGDELGGHIVSGHVDGKAEILSVTSEG 120

Query: 121 DSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVG 180
           D+   RL  P +L +F+A KGS+ L+G SLTVN V    FDVLLIRHT+E TTW   K G
Sbjct: 121 DATRYRLRAPEHLAKFVAPKGSIALDGTSLTVNAVDGTDFDVLLIRHTLEVTTWGDRKAG 180

Query: 181 DLINIEVDSMMRYIARLYALNTS 203
           D +N EVD+M RY ARL    ++
Sbjct: 181 DFVNFEVDTMARYAARLAEFPSA 203

Species: Rhizobium etli
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  226 bits (577), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 108/203 (53%), Positives = 142/203 (69%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVD 60
           MFTGIVTDIG I +++ + +G++LRV TSY+ + + +G SI+H+GICLTV  L +E S  
Sbjct: 1   MFTGIVTDIGTIESVSSLKEGIKLRVATSYDPATIDMGASISHSGICLTVTGLPQEGSNG 60

Query: 61  NWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIG 120
            W+EVE W E  R+T I +W  G+ INLERS+K+GD L GH+VSGH+DG  EIL +   G
Sbjct: 61  RWFEVEAWEEALRLTTIGAWQEGSRINLERSLKIGDELGGHIVSGHVDGKAEILSVTAEG 120

Query: 121 DSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVG 180
           D+   RL  P +L +F+A KGS+ L+G SLTVN V    FDVLLIRHT+E TTW   K G
Sbjct: 121 DATRYRLRAPEHLAKFVAPKGSIALDGTSLTVNAVDGTDFDVLLIRHTLEVTTWGDRKAG 180

Query: 181 DLINIEVDSMMRYIARLYALNTS 203
           D +N EVD+M RY ARL    ++
Sbjct: 181 DFVNFEVDTMARYAARLAEFPST 203

Species: Rhizobium leguminosarum
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  226 bits (577), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 104/203 (51%), Positives = 142/203 (69%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVD 60
           MFTGIVTD+G +  +  +A+G+RLRV T+Y+   + +G SI+H G+CLTV +L E+ S +
Sbjct: 1   MFTGIVTDVGTVSELEALAEGIRLRVATNYDPKTIDMGASISHGGVCLTVTKLPEDGSNE 60

Query: 61  NWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIG 120
            WYEVE W E  R+T IA W  GT +NLER++K+GD L GH+VSGH+DG  EIL ++  G
Sbjct: 61  RWYEVEAWEEALRLTTIAGWQKGTHVNLERALKIGDELGGHIVSGHVDGKAEILSVEPEG 120

Query: 121 DSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVG 180
           +++  RL  P +L +F+A KGS+ L+G SLTVN V    FDVLLIRHT+  TTW   + G
Sbjct: 121 EAVRIRLRAPDHLAKFVAPKGSIALDGTSLTVNAVDGTDFDVLLIRHTLTVTTWGERQPG 180

Query: 181 DLINIEVDSMMRYIARLYALNTS 203
           D +N EVD+M RY ARL    ++
Sbjct: 181 DFVNFEVDTMARYAARLAEFPSA 203

Species: Agrobacterium sp. H13-3
Genus: Agrobacterium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  254 bits (652), Expect = 1e-68
 Identities = 87/197 (44%), Positives = 126/197 (63%), Gaps = 5/197 (2%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVD 60
           MFTGIV ++G + ++ P   G+RL +      S +KLG SIA  G+CLTV  +       
Sbjct: 1   MFTGIVEEVGTVESIEPKGDGLRLTIEAGKLLSDLKLGDSIAVNGVCLTVTEID-----G 55

Query: 61  NWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIG 120
           + + V+V  ET R TN+    +G  +NLER+++LGDRL GH+VSGH+DGT EI+ ++  G
Sbjct: 56  DSFTVDVSPETLRRTNLGDLKVGDRVNLERALRLGDRLGGHIVSGHVDGTGEIVSIEKEG 115

Query: 121 DSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVG 180
           +S+  R   P  L ++I  KGS+ ++GVSLTVN V  + F V LI HT+E TT    KVG
Sbjct: 116 NSVEFRFKAPAELAKYIVEKGSIAVDGVSLTVNEVDGDRFSVNLIPHTLENTTLGEKKVG 175

Query: 181 DLINIEVDSMMRYIARL 197
           D +N+E+D + +Y+ RL
Sbjct: 176 DRVNLEIDLLAKYVERL 192

Length = 194

 Score =  155 bits (395), Expect = 5e-39
 Identities = 66/195 (33%), Positives = 106/195 (54%), Gaps = 6/195 (3%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRV-MTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSV 59
           MFTGIV    +++A+        L +         +++G S+A  G+CLTV ++      
Sbjct: 1   MFTGIVQATAEVVAIHKKDGLNTLEIAFPPELLEGLEIGASVAVNGVCLTVTKIE----- 55

Query: 60  DNWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFI 119
            +    +V  ET R+TN+A   +G  +N+ERS K G  + GH++SGH+D T  ++ +   
Sbjct: 56  GDRVFFDVMEETLRLTNLADLRVGDRVNIERSAKFGAEIGGHILSGHVDTTATVVEISDT 115

Query: 120 GDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKV 179
            ++   R  +P    ++I  KG + +NG SLTV  V ++ F+V LI  T+  T     KV
Sbjct: 116 EENYDIRFRVPPEWMKYIFAKGFIGVNGCSLTVGEVDESEFEVHLIPETLRATNLGAKKV 175

Query: 180 GDLINIEVDSMMRYI 194
           GDL+NIE+DS  + I
Sbjct: 176 GDLVNIEIDSQTQVI 190

Length = 206

 Score =  152 bits (386), Expect = 5e-38
 Identities = 68/198 (34%), Positives = 115/198 (58%), Gaps = 7/198 (3%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSK-MKLGCSIAHAGICLTVVRLSEEHSV 59
           MFTGI+    K++++      + L V  + +    ++LG SIA  G+CLTV  +++ H  
Sbjct: 1   MFTGIIQGTAKLVSIKEKPLFISLVVNLADHMLDDLELGDSIAVNGVCLTVTEINKNH-- 58

Query: 60  DNWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFI 119
              + V++  ET + TN+    +GT++N+ER++K    + GH VSGHID T EI  ++  
Sbjct: 59  ---FSVDLSPETLKRTNLGDLKVGTWVNIERALKADGEIGGHFVSGHIDTTAEIAKIETS 115

Query: 120 GDSMYCRLSLP-HNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHK 178
            +++     L    L ++I  KGS+ ++G+SLT+  V +  F V LI HT+E T   + K
Sbjct: 116 ENNVQFWFKLQDSELMKYIVEKGSIAVDGISLTIGKVTETRFCVSLIPHTLENTILGLKK 175

Query: 179 VGDLINIEVDSMMRYIAR 196
           +GD +NIE+D + + +A 
Sbjct: 176 LGDRVNIEIDMLGKAVAD 193

The name ribE was selected, from among alternatives including ribB and ribC, to match the usage in EcoCyc. Length = 200

 Score =  133 bits (337), Expect = 3e-32
 Identities = 68/200 (34%), Positives = 113/200 (56%), Gaps = 10/200 (5%)

Query: 1   MFTGIVTDIGKIIAMTPI-AKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRL-SEEHS 58
           +FTGIV ++G++ ++      G  L++  S     +KLG SIA  G CLTV     +E +
Sbjct: 1   LFTGIVEEMGEVKSLGVTDDGGFDLKIEASTVLDGVKLGDSIAVNGTCLTVTEFDGDEFT 60

Query: 59  VDNWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDF 118
           V       +  ET R T++     G+ +NLER+++ G R+ GH V GH+DGT  I+  + 
Sbjct: 61  VG------LAPETLRKTSLGELKTGSLVNLERALRPGSRMGGHFVQGHVDGTGTIVEQEP 114

Query: 119 IGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGK--NFFDVLLIRHTIEETTWKM 176
            GDS++ ++     L ++I  KG + ++G SLTV  V      F+ +L+ +T ++    +
Sbjct: 115 EGDSLWVKVKADPELLKYIVPKGFIAVDGTSLTVVDVDDEEGCFNFMLVPYTQQKVVIPL 174

Query: 177 HKVGDLINIEVDSMMRYIAR 196
            KVGD +N+EVD + +Y+ R
Sbjct: 175 KKVGDKVNLEVDILGKYVER 194

Length = 194

 Score =  116 bits (291), Expect = 5e-27
 Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 9/201 (4%)

Query: 1   MFTGIVTDIGKIIAMTP-IAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSV 59
           MFTGIV  +G++  +      G  L++          LG SIA  G CLTV   + E   
Sbjct: 1   MFTGIVECMGEVKDLGMADDGGFDLKIGARVILEDCHLGDSIAVNGTCLTVTEFNAEE-- 58

Query: 60  DNWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFI 119
              + V +  ET R TN+     G+ +NLER+V+   R+ GH+V GH+D    I+ ++  
Sbjct: 59  ---FTVGIAPETLRKTNLEELKKGSPVNLERAVQPVSRMGGHVVQGHVDTVAVIVSMEVE 115

Query: 120 GDSMYCRLSL-PHNLEQFIAVKGSVCLNGVSLTVNLV--GKNFFDVLLIRHTIEETTWKM 176
           GDS++ +  L    L ++I  KG + ++G SLT+  V   ++ F++++I +T +      
Sbjct: 116 GDSIWFKFKLRDKGLLKYIVPKGFIAVDGTSLTIVDVDDEESCFNIMMIAYTQQNVIMPT 175

Query: 177 HKVGDLINIEVDSMMRYIARL 197
            K+GD +N+EVD M +Y+ +L
Sbjct: 176 KKIGDKVNLEVDIMGKYVEKL 196

Length = 210

 Score =  202 bits (515), Expect = 5e-53
 Identities = 88/201 (43%), Positives = 125/201 (62%), Gaps = 10/201 (4%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRVMT-SYNTSKMKLGCSIAHAGICLTVVRLSEEHSV 59
           MFTGIV +IGK+     +  G+ L + +       +KLG SIA  G+CLTV   +E+   
Sbjct: 1   MFTGIVEEIGKV---KKVENGITLTIESAKLILEDVKLGDSIAVNGVCLTVTEFNEDG-- 55

Query: 60  DNWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFI 119
              + V+V  ET R TN+    +G  +NLER++KLGDRL GHLVSGH+DGT EI+ ++  
Sbjct: 56  ---FSVDVMPETLRRTNLGDLKVGDKVNLERALKLGDRLGGHLVSGHVDGTGEIVKIEKD 112

Query: 120 GDSMYCRLSL-PHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHK 178
           G+++       P  L ++I  KGS+ ++G+SLTVN V  + F V LI HT+E TT    K
Sbjct: 113 GNAVRFWFKAPPEELAKYIVEKGSIAVDGISLTVNEVEDDTFSVSLIPHTLERTTLGEKK 172

Query: 179 VGDLINIEVDSMMRYIARLYA 199
           VGD +NIE+D + +Y+ RL A
Sbjct: 173 VGDRVNIEIDVLAKYVERLLA 193

Length = 204

 Score = 62.2 bits (152), Expect = 1e-10
 Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 1/86 (1%)

Query: 104 SGHIDGTVEILFLDFIGDSMYCRLSLP-HNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDV 162
           +G ++G  EI  +   G++    + LP   L + +  K S+ +NG+SLTV  V  N F  
Sbjct: 1   TGIVEGVGEIAEIIENGNARSIWIKLPDKMLTKVLIGKDSIAVNGISLTVTEVTGNQFTF 60

Query: 163 LLIRHTIEETTWKMHKVGDLINIEVD 188
            LI  T++ T     KVGD +N+E+D
Sbjct: 61  DLIPETLKRTNLGSLKVGDKVNLEID 86

This domain binds to derivatives of lumazine in some proteins. Some proteins have lost the residues involved in binding lumazine. Length = 86

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 15/94 (15%)

Query: 3  TGIVTDIGKIIAMTPIAKGMRLRV------MTSYNTSKMKLGCSIAHAGICLTVVRLSEE 56
          TGIV  +G+I  +        + +      +T     K     SIA  GI LTV  ++  
Sbjct: 1  TGIVEGVGEIAEIIENGNARSIWIKLPDKMLTKVLIGK----DSIAVNGISLTVTEVT-- 54

Query: 57 HSVDNWYEVEVWAETNRITNIASWGIGTFINLER 90
              N +  ++  ET + TN+ S  +G  +NLE 
Sbjct: 55 ---GNQFTFDLIPETLKRTNLGSLKVGDKVNLEI 85

This domain binds to derivatives of lumazine in some proteins. Some proteins have lost the residues involved in binding lumazine. Length = 86

Probab=100.00  E-value=0  Score=514.31  Aligned_cols=198  Identities=44%  Similarity=0.696  Sum_probs=191.9

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCCC
Q ss_conf             94533711899999987699359999817551126677246533315423650455566867999986565532013555
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIASW   80 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~l   80 (204)
T Consensus         1 MFTGIIe~~G~i~~i~~~~~~~~l~I~~~~~~~~~~iG~SIavnGvCLTV~~~~-----~~~~~fdv~~ETl~~T~l~~l   75 (198)
T PRK09289          1 MFTGIVEEVGTVVSIEEKGGGRRLTIEAPKLLSDLKLGDSIAVNGVCLTVTEID-----GDGFTVDVSPETLRRTNLGDL   75 (198)
T ss_pred             CCCEECCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEECCEEEEEEECC-----CCEEEEEEEHHHHHHCCCCCC
T ss_conf             988543548999999976997899998086435676788799888998889868-----988999989788333137777


Q ss_pred             CCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCEE
Q ss_conf             65663133543200000476424540100110111002331379875134211210023571998234578774168549
Q gi|254780347|r   81 GIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFF  160 (204)
Q Consensus        81 ~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~f  160 (204)
T Consensus        76 ~~G~~VNLErsl~~gd~lgGH~VsGHVD~~~~i~~i~~~~~~~~~~i~~p~~~~~yiv~KGsIaidGvSLTV~~v~-~~F  154 (198)
T PRK09289         76 KVGDRVNLERALRLGDRLGGHIVSGHVDGTGEIVSIEKSGNSVEFRIKAPAELAKYIVEKGSIAVDGVSLTVNEVD-GEF  154 (198)
T ss_pred             CCCCEEEECCCCCCCCEECCCEEEEEECEEEEEEEEEECCCCEEEEEECCHHHHCCCCCCCEEEEEEEEEEEEEEC-CEE
T ss_conf             7796671055755886206713238713489999999848829999992979963777776699961699978437-889


Q ss_pred             EEEEEHHHHCCCCHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCC
Q ss_conf             99984443301330024899674697135889999986023359
Q gi|254780347|r  161 DVLLIRHTIEETTWKMHKVGDLINIEVDSMMRYIARLYALNTSQ  204 (204)
Q Consensus       161 ~v~lIp~Tl~~T~l~~~k~Gd~VNiE~D~l~kyv~r~~~~~~~~  204 (204)
T Consensus       155 ~v~lIP~Tl~~T~l~~~~~Gd~VNiE~D~lakyv~r~l~~~~~~  198 (198)
T PRK09289        155 SVNLIPHTLEVTTLGELKVGDRVNLEIDLLAKYVERLLAARKNA  198 (198)
T ss_pred             EEEEEHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCC
T ss_conf             99995455654724448689988995862999999986443079

Probab=100.00  E-value=0  Score=505.18  Aligned_cols=197  Identities=34%  Similarity=0.559  Sum_probs=190.4

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECCC-CCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             9453371189999998769935999981755-112667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYN-TSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~-~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
T Consensus         1 MFTGIIe~~G~I~~i~~~~~~~~l~I~~~~~~~~~l~iGdSIavnGvCLTV~~~~-----~~~~~fdv~~ETl~~T~l~~   75 (207)
T PRK13020          1 MFTGIVQAVAEVVAIHKKDGLNTLEIAFPPDLLEGLEIGASVAVNGVCLTVTKIE-----GDRVFFDVMEETLRLTNLAN   75 (207)
T ss_pred             CCCEECCEEEEEEEEEECCCCEEEEEECCCHHHCCCCCCCEEEECCEEEEEEECC-----CCEEEEEEEHHHHHHCCHHH
T ss_conf             9885516389999999769968999986822413577898799888898889748-----98599998789631252313


Q ss_pred             CCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCE
Q ss_conf             56566313354320000047642454010011011100233137987513421121002357199823457877416854
Q gi|254780347|r   80 WGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNF  159 (204)
Q Consensus        80 l~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~  159 (204)
T Consensus        76 ~~~G~~VNLEral~~gdrlgGH~V~GHVD~~~~i~~i~~~~~~~~~~i~~p~~~~~~iv~KGSIaidGVSLTV~~v~~~~  155 (207)
T PRK13020         76 LRVGDRVNIERSAKFGAEIGGHILSGHVDTTAEVVEISETEENYDIRFRVPPEWMKYIFAKGFIGVNGCSLTVGDVEEGW  155 (207)
T ss_pred             CCCCCEEEECCCCCCCCEECCCEEEEECCEEEEEEEEEECCCCEEEEEECCHHHHCCCCCCCEEEEEEEEEEEEEECCCE
T ss_conf             23598760044756876517816789800599999999848938999955979953667687799924899998773998


Q ss_pred             EEEEEEHHHHCCCCHHHCCCCCEEEEEHH----HHHHHHHHHHCCCC
Q ss_conf             99998444330133002489967469713----58899999860233
Q gi|254780347|r  160 FDVLLIRHTIEETTWKMHKVGDLINIEVD----SMMRYIARLYALNT  202 (204)
Q Consensus       160 f~v~lIp~Tl~~T~l~~~k~Gd~VNiE~D----~l~kyv~r~~~~~~  202 (204)
T Consensus       156 f~V~lIPhTl~~T~l~~~k~Gd~VNiE~D~~~~~i~k~ver~l~~~~  202 (207)
T PRK13020        156 FEVHLIPETLRATNLGAKKVGDKVNIEIDSQTQVIVDTVERVLAARL  202 (207)
T ss_pred             EEEEEEEHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf             99999511354384434868998998385883489999999987543

Probab=100.00  E-value=0  Score=494.66  Aligned_cols=195  Identities=45%  Similarity=0.721  Sum_probs=184.1

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEE-CCCCCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             9453371189999998769935999981-755112667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMT-SYNTSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~-~~~~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
T Consensus         1 MFTGIIe~iG~V~~~~---~~~~~~i~~~~~~~~d~~lGdSIAvnGvCLTVt~~~~-----~~f~~dv~~ETl~~TnL~~   72 (204)
T COG0307           1 MFTGIVEEIGKVKKVE---NGITLTIESAKLILEDVKLGDSIAVNGVCLTVTEFNE-----DGFSVDVMPETLRRTNLGD   72 (204)
T ss_pred             CCCEEEEEEEEEEECC---CCEEEEEEECCCCCCCCCCCCEEEECCEEEEEEEECC-----CCEEEEECHHHHHHCCHHH
T ss_conf             9653310369998504---8569999504545566756774788989899999889-----9699995389964330101


Q ss_pred             CCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEE-CCCCCCCEECCCCEEEEEEEEEEEEEECCC
Q ss_conf             5656631335432000004764245401001101110023313798751-342112100235719982345787741685
Q gi|254780347|r   80 WGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLS-LPHNLEQFIAVKGSVCLNGVSLTVNLVGKN  158 (204)
Q Consensus        80 l~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~-~~~~~~~~l~~KgsI~idGvSLTV~~~~~~  158 (204)
T Consensus        73 ~~~G~~VNLERAl~~~~r~GGH~VsGHVDg~g~I~~i~~~~na~~~~~~~~~~~l~kyiv~KGsIavDGiSLTV~~v~~~  152 (204)
T COG0307          73 LKVGDKVNLERALKLGDRLGGHLVSGHVDGTGEIVKIEKDGNAVRFWFKAPPEELAKYIVEKGSIAVDGISLTVNEVEDD  152 (204)
T ss_pred             CCCCCEEEEEHHCCCCCCCCCEEEEEEEEEEEEEEEEEECCCEEEEEEECCCHHHHHHHCCCCEEEEEEEEEEEEEECCC
T ss_conf             66688885104133798353178876770089999998748709999975998998552046449983189999977287


Q ss_pred             EEEEEEEHHHHCCCCHHHCCCCCEEEEEHHHHHHHHHHHHCCCCC
Q ss_conf             499998444330133002489967469713588999998602335
Q gi|254780347|r  159 FFDVLLIRHTIEETTWKMHKVGDLINIEVDSMMRYIARLYALNTS  203 (204)
Q Consensus       159 ~f~v~lIp~Tl~~T~l~~~k~Gd~VNiE~D~l~kyv~r~~~~~~~  203 (204)
T Consensus       153 ~F~V~lIPhT~~~T~l~~~~~Gd~VNiE~D~l~kyver~l~~~~~  197 (204)
T COG0307         153 TFSVSLIPHTLERTTLGEKKVGDRVNIEIDVLAKYVERLLAAGKA  197 (204)
T ss_pred             EEEEEEEECCHHHCCHHHCCCCCEEEEEECHHHHHHHHHHHHCCC
T ss_conf             899999736043300300668998899681799999999863213

Probab=100.00  E-value=0  Score=484.46  Aligned_cols=196  Identities=36%  Similarity=0.590  Sum_probs=186.8

Q ss_pred             CCCEEEEEEEEEEEEEECCCC------EEEEEEEC-CCCCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHH
Q ss_conf             945337118999999876993------59999817-55112667724653331542365045556686799998656553
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKG------MRLRVMTS-YNTSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNR   73 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~------~~l~i~~~-~~~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~   73 (204)
T Consensus         1 MFTGIi~~~g~~~s~~~~~~~esGGqG~~~~~~~~~~~L~D~~lGdSIA~NGvCLTV~e~~~-----~~f~vd~s~ET~~   75 (225)
T TIGR00187         1 MFTGIIQGTGKVKSIKEKRLFESGGQGISLTINLAQKILEDLHLGDSIAVNGVCLTVTEINK-----DHFSVDLSPETLK   75 (225)
T ss_pred             CCCEEECCCEEEEECCCCCCCCCCCCCEEECCCCCHHHHCCCCCCCEEEECCEEEEEEEECC-----CEEEEEECHHHHH
T ss_conf             96302023023320013322012785047634872345402520454123674332221128-----8689983256733


Q ss_pred             HCCCCCCCCC-CCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEEC-CCC-------CCCEECCCCEEE
Q ss_conf             2013555656-6313354320000047642454010011011100233137987513-421-------121002357199
Q gi|254780347|r   74 ITNIASWGIG-TFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSL-PHN-------LEQFIAVKGSVC  144 (204)
Q Consensus        74 ~T~l~~l~~G-~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~-~~~-------~~~~l~~KgsI~  144 (204)
T Consensus        76 ~t~L~~~k~gr~~VNiErA~~~~~~~GGHfvsGHvd~~a~i~~i~~~~N~~~~~f~~~~~~qkqWqey~~ky~v~KGsIa  155 (225)
T TIGR00187        76 RTNLGDLKVGRTKVNIERALKADGRIGGHFVSGHVDGVAEIEKIEESENAVQFWFKLRDSEQKQWQEYLLKYIVEKGSIA  155 (225)
T ss_pred             HHHHHHHHHCCCEECEEHHHHCCCEECCEEEEEEEEEEEEEEEHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEE
T ss_conf             54233355236720110674169741666751116665522300301582899984058134678887687642477579


Q ss_pred             EEEEEEEEEEECCCEEE----EEEEHHHHCCCCHHHCCCCCEEEEEHHHHHHHHHHHHCCC
Q ss_conf             82345787741685499----9984443301330024899674697135889999986023
Q gi|254780347|r  145 LNGVSLTVNLVGKNFFD----VLLIRHTIEETTWKMHKVGDLINIEVDSMMRYIARLYALN  201 (204)
Q Consensus       145 idGvSLTV~~~~~~~f~----v~lIp~Tl~~T~l~~~k~Gd~VNiE~D~l~kyv~r~~~~~  201 (204)
T Consensus       156 vDG~SLTi~~v~e~~f~Gafyv~lIP~T~~~T~~~~~k~G~~VNIE~D~~gk~~~~~l~~~  216 (225)
T TIGR00187       156 VDGISLTIGKVTEDSFCGAFYVSLIPHTLEETILGLKKIGDRVNIEIDMLGKYVARFLEKT  216 (225)
T ss_pred             ECCEEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHH
T ss_conf             9667876577413603315899863101222210111768776542085789999999987

5.1.9 from EC) (RS-alpha) (gene ribC in Escherichia coli, ribB in Bacillus subtilis and Photobacterium leiognathi, RIB5 in yeast. This enzyme synthesises riboflavin from two moles of 6,7- dimethyl-8-(1'-D-ribityl)lumazine (Lum), a pteridine-derivative. Photobacterium phosphoreum lumazine protein (LumP) (gene luxL). LumP is a protein that modulates the colour of the bioluminescence emission of bacterial luciferase. In the presence of LumP, light emission is shifted to higher energy values (shorter wavelength). LumP binds non-covalently to 6,7-dimethyl-8-(1'-D-ribityl)lumazine. Vibrio fischeri yellow fluorescent protein (YFP) (gene luxY). Like LumP, YFP modulates light emission but towards a longer wavelength. YFP binds non-covalently to FMN. These proteins seem to have evolved from the duplication of a domain of about 100 residues. In its C-terminal section, this domain contains a conserved motif [KR]-V-N-[LI]-E which has been proposed to be the binding site for lumazine (Lum) and some of its derivatives. RS-alpha which binds two molecules of Lum has two perfect copies of this motif, while LumP which binds one molecule of Lum, has a Glu instead of Lys/Arg in the first position of the second copy of the motif. Similarly, YFP, which binds to one molecule of FMN, also seems to have a potentially dysfunctional binding site by substitution of Gly for Glu in the last position of the first copy of the motif. .

Probab=100.00  E-value=0  Score=364.65  Aligned_cols=195  Identities=34%  Similarity=0.547  Sum_probs=185.1

Q ss_pred             CCCEEEEEEEEEEEEEE-CCCCEEEEEEECCCCCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             94533711899999987-69935999981755112667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTP-IAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~-~~~~~~l~i~~~~~~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
T Consensus         1 mftgive~mG~Vkd~~~~dd~Gf~~kI~A~~iL~Dch~GDSIAVNGtCLTVTeFn~~-----~FtVGiaPEtlr~tnl~~   75 (210)
T KOG3310           1 MFTGIVECMGEVKDLGMADDGGFDLKIGARVILEDCHLGDSIAVNGTCLTVTEFNAE-----EFTVGIAPETLRKTNLEE   75 (210)
T ss_pred             CCCCHHHHHEEHHHCCCCCCCCEEEEECCCEEEEECCCCCEEEECCEEEEEEEECCC-----CEEEECCHHHHHHCCHHH
T ss_conf             941057221132304765468788896687355312357727883479988860542-----058725879963256988


Q ss_pred             CCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEEC-CCCCCCEECCCCEEEEEEEEEEEEEEC--
Q ss_conf             56566313354320000047642454010011011100233137987513-421121002357199823457877416--
Q gi|254780347|r   80 WGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSL-PHNLEQFIAVKGSVCLNGVSLTVNLVG--  156 (204)
Q Consensus        80 l~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~-~~~~~~~l~~KgsI~idGvSLTV~~~~--  156 (204)
T Consensus        76 ~k~G~pVNLERAv~~~~RmGGH~VQGHVDtva~Ivs~~~eG~si~f~f~~rD~~~lKYIV~KGfiavDGTSLTi~~Vd~~  155 (210)
T KOG3310          76 LKKGSPVNLERAVQPVSRMGGHVVQGHVDTVAVIVSMEVEGDSIWFKFKLRDKGLLKYIVPKGFIAVDGTSLTIVDVDDE  155 (210)
T ss_pred             HHCCCCCCHHHHCCCCCCCCCEEEEEEECCEEEEEEECCCCCEEEEEEEECCCCCEEEEECCCEEEECCCEEEEEEECCC
T ss_conf             73599625656406122005547876603237899861369779999885682505788115479972736899997688


Q ss_pred             CCEEEEEEEHHHHCCCCHHHCCCCCEEEEEHHHHHHHHHHHHCC
Q ss_conf             85499998444330133002489967469713588999998602
Q gi|254780347|r  157 KNFFDVLLIRHTIEETTWKMHKVGDLINIEVDSMMRYIARLYAL  200 (204)
Q Consensus       157 ~~~f~v~lIp~Tl~~T~l~~~k~Gd~VNiE~D~l~kyv~r~~~~  200 (204)
T Consensus       156 ~s~F~imMI~yTQ~nVimp~KkiGd~VN~EVD~~GKy~Ekl~~~  199 (210)
T KOG3310         156 ESCFNIMMIAYTQQNVIMPTKKIGDKVNLEVDIMGKYVEKLLTS  199 (210)
T ss_pred             CCEEEEEEEEECCCCEEEECHHCCCEEEEEEEHHHHHHHHHHHH
T ss_conf             87589998410234278750142864668982676799999998

Probab=99.94  E-value=1.3e-27  Score=182.06  Aligned_cols=85  Identities=35%  Similarity=0.480  Sum_probs=82.2

Q ss_pred             EECCCCHHHHHHHCCCCCEEEEEEECCCC-CCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHHHCCCCCE
Q ss_conf             54010011011100233137987513421-12100235719982345787741685499998444330133002489967
Q gi|254780347|r  104 SGHIDGTVEILFLDFIGDSMYCRLSLPHN-LEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVGDL  182 (204)
Q Consensus       104 ~GhVd~~~~i~~i~~~~~~~~~~i~~~~~-~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~~~k~Gd~  182 (204)
T Consensus         1 TGiV~~~g~V~~i~~~~~~~~~~i~~~~~~~~~~~~~~~SIavnGvcLTV~~~~~~~~~~~ii~eTl~~T~l~~~k~G~~   80 (86)
T pfam00677         1 TGIVEGVGEIAEIIENGNARSIWIKLPDKMLTKVLIGKDSIAVNGISLTVTEVTGNQFTFDLIPETLKRTNLGSLKVGDK   80 (86)
T ss_pred             CCCEEEEEEEEEEEECCCCEEEEEEECCHHHHHCCCCCCEEEECCEEEEEEEECCCEEEEEEEHHHHHHCCCCCCCCCCE
T ss_conf             96882899999999979969999993817854202368879985589999998799999999899984383534877999


Q ss_pred             EEEEHH
Q ss_conf             469713
Q gi|254780347|r  183 INIEVD  188 (204)
Q Consensus       183 VNiE~D  188 (204)
T Consensus        81 VNlE~D   86 (86)
T pfam00677        81 VNLEID   86 (86)
T ss_pred             EEEEEC
T ss_conf             996589

This domain binds to derivatives of lumazine in some proteins. Some proteins have lost the residues involved in binding lumazine.

Probab=99.82  E-value=1.2e-20  Score=141.36  Aligned_cols=85  Identities=24%  Similarity=0.318  Sum_probs=44.4

Q ss_pred             EEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHHHCCCCCE
Q ss_conf             45401001101110023313798751342112100235719982345787741685499998444330133002489967
Q gi|254780347|r  103 VSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVGDL  182 (204)
Q Consensus       103 v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~~~k~Gd~  182 (204)
T Consensus         2 FTGIIe~~G~I~~i~~~~~~~~l~I~~~~~~~~~l~iGdSIavnGvCLTV~~~~~~~~~fdv~~ETl~~T~l~~~~~G~~   81 (207)
T PRK13020          2 FTGIVQAVAEVVAIHKKDGLNTLEIAFPPDLLEGLEIGASVAVNGVCLTVTKIEGDRVFFDVMEETLRLTNLANLRVGDR   81 (207)
T ss_pred             CCEECCEEEEEEEEEECCCCEEEEEECCCHHHCCCCCCCEEEECCEEEEEEECCCCEEEEEEEHHHHHHCCHHHCCCCCE
T ss_conf             88551638999999976996899998682241357789879988889888974898599998789631252313235987


Q ss_pred             EEEEH
Q ss_conf             46971
Q gi|254780347|r  183 INIEV  187 (204)
Q Consensus       183 VNiE~  187 (204)
T Consensus        82 VNLEr   86 (207)
T PRK13020         82 VNIER   86 (207)
T ss_pred             EEECC
T ss_conf             60044

Probab=99.81  E-value=2.4e-20  Score=139.61  Aligned_cols=86  Identities=24%  Similarity=0.339  Sum_probs=64.5

Q ss_pred             EEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHHHCCCCC
Q ss_conf             24540100110111002331379875134211210023571998234578774168549999844433013300248996
Q gi|254780347|r  102 LVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVGD  181 (204)
Q Consensus       102 ~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~~~k~Gd  181 (204)
T Consensus         1 MFTGIIe~~G~i~~i~~~~~~~~l~I~~~~~~-~~~~iG~SIavnGvCLTV~~~~~~~~~fdv~~ETl~~T~l~~l~~G~   79 (198)
T PRK09289          1 MFTGIVEEVGTVVSIEEKGGGRRLTIEAPKLL-SDLKLGDSIAVNGVCLTVTEIDGDGFTVDVSPETLRRTNLGDLKVGD   79 (198)
T ss_pred             CCCEECCEEEEEEEEEECCCCEEEEEECCCCC-CCCCCCCEEEECCEEEEEEECCCCEEEEEEEHHHHHHCCCCCCCCCC
T ss_conf             98854354899999997699789999808643-56767887998889988898689889999897883331377777796


Q ss_pred             EEEEEHH
Q ss_conf             7469713
Q gi|254780347|r  182 LINIEVD  188 (204)
Q Consensus       182 ~VNiE~D  188 (204)
T Consensus        80 ~VNLErs   86 (198)
T PRK09289         80 RVNLERA   86 (198)
T ss_pred             EEEECCC
T ss_conf             6710557

Probab=99.81  E-value=1.4e-20  Score=140.97  Aligned_cols=88  Identities=27%  Similarity=0.335  Sum_probs=83.4

Q ss_pred             EEEECCCCHHHHHHHCCCCCE------EEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHH
Q ss_conf             245401001101110023313------79875134211210023571998234578774168549999844433013300
Q gi|254780347|r  102 LVSGHIDGTVEILFLDFIGDS------MYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWK  175 (204)
Q Consensus       102 ~v~GhVd~~~~i~~i~~~~~~------~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~  175 (204)
T Consensus         1 MFTGIi~~~g~~~s~~~~~~~esGGqG~~~~~~~~~~~L~D~~lGdSIA~NGvCLTV~e~~~~~f~vd~s~ET~~~t~L~   80 (225)
T TIGR00187         1 MFTGIIQGTGKVKSIKEKRLFESGGQGISLTINLAQKILEDLHLGDSIAVNGVCLTVTEINKDHFSVDLSPETLKRTNLG   80 (225)
T ss_pred             CCCEEECCCEEEEECCCCCCCCCCCCCEEECCCCCHHHHCCCCCCCEEEECCEEEEEEEECCCEEEEEECHHHHHHHHHH
T ss_conf             96302023023320013322012785047634872345402520454123674332221128868998325673354233


Q ss_pred             HCCCC-CEEEEEHHH
Q ss_conf             24899-674697135
Q gi|254780347|r  176 MHKVG-DLINIEVDS  189 (204)
Q Consensus       176 ~~k~G-d~VNiE~D~  189 (204)
T Consensus        81 ~~k~gr~~VNiErA~   95 (225)
T TIGR00187        81 DLKVGRTKVNIERAL   95 (225)
T ss_pred             HHHHCCCEECEEHHH
T ss_conf             355236720110674

5.1.9 from EC) (RS-alpha) (gene ribC in Escherichia coli, ribB in Bacillus subtilis and Photobacterium leiognathi, RIB5 in yeast. This enzyme synthesises riboflavin from two moles of 6,7- dimethyl-8-(1'-D-ribityl)lumazine (Lum), a pteridine-derivative. Photobacterium phosphoreum lumazine protein (LumP) (gene luxL). LumP is a protein that modulates the colour of the bioluminescence emission of bacterial luciferase. In the presence of LumP, light emission is shifted to higher energy values (shorter wavelength). LumP binds non-covalently to 6,7-dimethyl-8-(1'-D-ribityl)lumazine. Vibrio fischeri yellow fluorescent protein (YFP) (gene luxY). Like LumP, YFP modulates light emission but towards a longer wavelength. YFP binds non-covalently to FMN. These proteins seem to have evolved from the duplication of a domain of about 100 residues. In its C-terminal section, this domain contains a conserved motif [KR]-V-N-[LI]-E which has been proposed to be the binding site for lumazine (Lum) and some of its derivatives. RS-alpha which binds two molecules of Lum has two perfect copies of this motif, while LumP which binds one molecule of Lum, has a Glu instead of Lys/Arg in the first position of the second copy of the motif. Similarly, YFP, which binds to one molecule of FMN, also seems to have a potentially dysfunctional binding site by substitution of Gly for Glu in the last position of the first copy of the motif. .

Probab=99.51  E-value=1.4e-14  Score=105.81  Aligned_cols=87  Identities=22%  Similarity=0.275  Sum_probs=74.7

Q ss_pred             EEEECCCCHHHHHHHCCCC-CEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHHHCCCC
Q ss_conf             2454010011011100233-137987513421121002357199823457877416854999984443301330024899
Q gi|254780347|r  102 LVSGHIDGTVEILFLDFIG-DSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVG  180 (204)
Q Consensus       102 ~v~GhVd~~~~i~~i~~~~-~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~~~k~G  180 (204)
T Consensus         1 mftgive~mG~Vkd~~~~dd~Gf~~kI~A~~iL~Dc-h~GDSIAVNGtCLTVTeFn~~~FtVGiaPEtlr~tnl~~~k~G   79 (210)
T KOG3310           1 MFTGIVECMGEVKDLGMADDGGFDLKIGARVILEDC-HLGDSIAVNGTCLTVTEFNAEEFTVGIAPETLRKTNLEELKKG   79 (210)
T ss_pred             CCCCHHHHHEEHHHCCCCCCCCEEEEECCCEEEEEC-CCCCEEEECCEEEEEEEECCCCEEEECCHHHHHHCCHHHHHCC
T ss_conf             941057221132304765468788896687355312-3577278834799888605420587258799632569887359


Q ss_pred             CEEEEEHHH
Q ss_conf             674697135
Q gi|254780347|r  181 DLINIEVDS  189 (204)
Q Consensus       181 d~VNiE~D~  189 (204)
T Consensus        80 ~pVNLERAv   88 (210)
T KOG3310          80 SPVNLERAV   88 (210)
T ss_pred             CCCCHHHHC
T ss_conf             962565640

Probab=99.89  E-value=3.4e-23  Score=156.22  Aligned_cols=83  Identities=30%  Similarity=0.388  Sum_probs=75.4

Q ss_pred             CEEEEEEEEEEEEEECCCCEEEEEEECCC-CCC-CCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCCC
Q ss_conf             53371189999998769935999981755-112-6677246533315423650455566867999986565532013555
Q gi|254780347|r    3 TGIVTDIGKIIAMTPIAKGMRLRVMTSYN-TSK-MKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIASW   80 (204)
Q Consensus         3 tGIV~~~G~V~~i~~~~~~~~l~i~~~~~-~~~-l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~l   80 (204)
T Consensus         1 TGiV~~~g~V~~i~~~~~~~~~~i~~~~~~~~~~~~~~~SIavnGvcLTV~~~~-----~~~~~~~ii~eTl~~T~l~~~   75 (86)
T pfam00677         1 TGIVEGVGEIAEIIENGNARSIWIKLPDKMLTKVLIGKDSIAVNGISLTVTEVT-----GNQFTFDLIPETLKRTNLGSL   75 (86)
T ss_pred             CCCEEEEEEEEEEEECCCCEEEEEEECCHHHHHCCCCCCEEEECCEEEEEEEEC-----CCEEEEEEEHHHHHHCCCCCC
T ss_conf             968828999999999799699999938178542023688799855899999987-----999999998999843835348


Q ss_pred             CCCCCCCCCC
Q ss_conf             6566313354
Q gi|254780347|r   81 GIGTFINLER   90 (204)
Q Consensus        81 ~~G~~VNLE~   90 (204)
T Consensus        76 k~G~~VNlE~   85 (86)
T pfam00677        76 KVGDKVNLEI   85 (86)
T ss_pred             CCCCEEEEEE
T ss_conf             7799999658

This domain binds to derivatives of lumazine in some proteins. Some proteins have lost the residues involved in binding lumazine.

Probab=99.76  E-value=8.5e-19  Score=130.51  Aligned_cols=84  Identities=27%  Similarity=0.391  Sum_probs=52.9

Q ss_pred             CEEEEEEEEEEEEEECCCCEEEEEE-ECCCCCC--CCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             5337118999999876993599998-1755112--667724653331542365045556686799998656553201355
Q gi|254780347|r    3 TGIVTDIGKIIAMTPIAKGMRLRVM-TSYNTSK--MKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         3 tGIV~~~G~V~~i~~~~~~~~l~i~-~~~~~~~--l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
T Consensus        97 sGHVDg~g~I~~i~~~~na~~~~~~~~~~~l~kyiv~KG-sIavDGiSLTV~~v~-----~~~F~V~lIPhT~~~T~l~~  170 (204)
T COG0307          97 SGHVDGTGEIVKIEKDGNAVRFWFKAPPEELAKYIVEKG-SIAVDGISLTVNEVE-----DDTFSVSLIPHTLERTTLGE  170 (204)
T ss_pred             EEEEEEEEEEEEEEECCCEEEEEEECCCHHHHHHHCCCC-EEEEEEEEEEEEEEC-----CCEEEEEEEECCHHHCCHHH
T ss_conf             767700899999987487099999759989985520464-499831899999772-----87899999736043300300


Q ss_pred             CCCCCCCCCCCCC
Q ss_conf             5656631335432
Q gi|254780347|r   80 WGIGTFINLERSV   92 (204)
Q Consensus        80 l~~G~~VNLE~a~   92 (204)
T Consensus       171 ~~~Gd~VNiE~D~  183 (204)
T COG0307         171 KKVGDRVNIEIDV  183 (204)
T ss_pred             CCCCCEEEEEECH
T ss_conf             6689988996817

 Score =  188 bits (479), Expect = 7e-49
 Identities = 35/188 (18%), Positives = 73/188 (38%), Gaps = 7/188 (3%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSK-MKLGCSIAHAGICLTVVRLSEEHSV 59
           MF GIV   G I +++      R  +       + + +   +   G   TVVR+      
Sbjct: 1   MFRGIVQGRGVIRSISKSEDSQRHGIAFPEGMFQLVDVDTVMLVNGCSNTVVRIL----- 55

Query: 60  DNWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFI 119
            +    ++  +    T       G  +NLE   K G+ +    ++G+I GT  +  ++  
Sbjct: 56  GDMVYFDI-DQALGTTTFDGLKEGDQVNLEIHPKFGEVVGRGGLTGNIKGTALVAAIEEN 114

Query: 120 GDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKV 179
                  + +P  L + + VK  + ++G+SL +  +  +   +   R  +  T       
Sbjct: 115 DAGFSVLIDIPKGLAENLTVKDDIGIDGISLPITDMSDSIITLNYSRDLLASTNIASLAK 174

Query: 180 GDLINIEV 187
              +N+E+
Sbjct: 175 DVKVNVEI 182

 Score =  175 bits (444), Expect = 8e-45
 Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 7/199 (3%)

Query: 1   MFTGIVTDIGKIIAMTP-IAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSV 59
           MFTG+V  IG +  +   I  G  +++           G SIA  G CLTV         
Sbjct: 1   MFTGLVEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVT-----DFD 55

Query: 60  DNWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFI 119
              + V +  E+ R+TN+     G  +NLER+V    R+ GH V GH+D   EI+     
Sbjct: 56  RYHFTVGIAPESLRLTNLGQCKAGDPVNLERAVLSSTRMGGHFVQGHVDTVAEIVEKKQD 115

Query: 120 GDSMYCRLSLPHNLE-QFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHK 178
           G+++            ++I  KG + L+G SLT+  V  + F +++I +T  +       
Sbjct: 116 GEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHVDDSTFSIMMISYTQSKVIMAKKN 175

Query: 179 VGDLINIEVDSMMRYIARL 197
           VGDL+N+EVD + +Y  +L
Sbjct: 176 VGDLVNVEVDQIGKYTEKL 194

 Score =  171 bits (435), Expect = 9e-44
 Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 7/199 (3%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRV-MTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSV 59
           MFTGIV    K++++          V +  +    ++ G S+AH G CLTV  +      
Sbjct: 1   MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEI-----N 55

Query: 60  DNWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFI 119
            N    ++  ET RITN+    +G ++N+ER+ K  D + GHL+SGHI  T E+  +   
Sbjct: 56  GNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTS 115

Query: 120 GDS-MYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHK 178
            ++           L ++I  KG + ++G+SLTV  V    F V LI  T+E TT    K
Sbjct: 116 ENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKK 175

Query: 179 VGDLINIEVDSMMRYIARL 197
           +G  +NIE+D   + +   
Sbjct: 176 LGARVNIEIDPQTQAVVDT 194

 Score =  119 bits (299), Expect = 4e-28
 Identities = 35/192 (18%), Positives = 72/192 (37%), Gaps = 7/192 (3%)

Query: 1   MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYN-TSKMKLGCSIAHAGICLTVVRLSEEHSV 59
           MF GIV   G I  ++      R  +    +    ++ G  +   G  LTV        +
Sbjct: 1   MFKGIVQGAGIIKKISKNDDTQRHGITFPKDILESVEKGTVMLVNGCSLTV------VRI 54

Query: 60  DNWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFI 119
                     +    T      +G  +NLE   + G  L    ++G+I G   +  +   
Sbjct: 55  SGDVVYFDIDQAINTTTFRELEVGNKVNLEVRPEFGSLLGKGALTGNIKGVATVDNITEE 114

Query: 120 GDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKV 179
            D +   + +P +L + I  +  + +NGVS ++  +  +   +   ++    T     + 
Sbjct: 115 EDRLKVYIKIPKDLIENILSEDHIGINGVSHSIEEISDDIIFINYPKNLSITTNLGTLEK 174

Query: 180 GDLINIEVDSMM 191
           G  +N+E  ++ 
Sbjct: 175 GSDVNVETLNVS 186

Probab=100.00  E-value=0  Score=503.55  Aligned_cols=198  Identities=30%  Similarity=0.497  Sum_probs=188.6

Q ss_pred             CCCEEEEEEEEEEEEEEC-CCCEEEEEEECCCCCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             945337118999999876-9935999981755112667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPI-AKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~-~~~~~l~i~~~~~~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
                      |||||||++|+|.++++. ++++++.+.++..++++++|||||||||||||++++     +++|+|++++||+++|||+.
T Consensus         1 MFTGII~~~G~V~~i~~~~~~~~~l~i~~~~~~~~l~iG~SIavnGvCLTV~~~~-----~~~~~~dv~~ETl~~T~l~~   75 (208)
T 1kzl_A            1 MFTGLVEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFD-----RYHFTVGIAPESLRLTNLGQ   75 (208)
T ss_dssp             CBCSCCCEEEEEEEEEEETTTEEEEEEECGGGCTTCCTTCEEEETTEEEEEEEEC-----SSEEEEEECHHHHHHSSGGG
T ss_pred             CCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCEEEEEEECC-----CCEEEEEEHHHHHHHHHHCC
T ss_conf             9880107699999989768995899997574224477788699889998899768-----87799998588555665255


Q ss_pred             CCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCC-CCCCEECCCCEEEEEEEEEEEEEECCC
Q ss_conf             5656631335432000004764245401001101110023313798751342-112100235719982345787741685
Q gi|254780347|r   80 WGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPH-NLEQFIAVKGSVCLNGVSLTVNLVGKN  158 (204)
Q Consensus        80 l~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~-~~~~~l~~KgsI~idGvSLTV~~~~~~  158 (204)
                      |++|++|||||||++|||+|||+||||||++|+++++++.++++.+++..|+ .+.+|+++|||||+|||||||+++.++
T Consensus        76 l~~G~~VNLErsl~~gd~lgGH~V~GHVD~~~~i~~i~~~~~~~~~~~~~~~~~~~~yiv~KGsIaidGvSLTV~~v~~~  155 (208)
T 1kzl_A           76 CKAGDPVNLERAVLSSTRMGGHFVQGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHVDDS  155 (208)
T ss_dssp             CCTTCEEEEEECCCCSCCSSSCCBCSCCCEEEEEEEEEEETTEEEEEEEESSGGGGGGCCTTCEEEETTEEEEEEEECSS
T ss_pred             CCCCCEECCCCCEECCCEECCEEEEEECCEEEEEEEEEECCCCEEEEEEEEEHHHHCCEEECCEEEEEEEEEEEEEECCC
T ss_conf             77898883156531786867844788740899999999769963799995101122124650109985048999867299


Q ss_pred             EEEEEEEHHHHCCCCHHHCCCCCEEEEEHHHHHHHHHHHHCCCCC
Q ss_conf             499998444330133002489967469713588999998602335
Q gi|254780347|r  159 FFDVLLIRHTIEETTWKMHKVGDLINIEVDSMMRYIARLYALNTS  203 (204)
Q Consensus       159 ~f~v~lIp~Tl~~T~l~~~k~Gd~VNiE~D~l~kyv~r~~~~~~~  203 (204)
                      +|+|+||||||++|||+++++||+||||+|++|||++|+++.+.+
T Consensus       156 ~f~v~lIP~Tl~~T~l~~~~~Gd~VNiE~D~lakYi~~~l~~~~~  200 (208)
T 1kzl_A          156 TFSIMMISYTQSKVIMAKKNVGDLVNVEVDQIGKYTEKLVEAHIA  200 (208)
T ss_dssp             CEEEEECHHHHTTSGGGGCCTTCEEEEEECTHHHHHHHHHHHHTT
T ss_pred             EEEEEEEHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH
T ss_conf             899999778865451114878999998641499999999877543

Probab=100.00  E-value=0  Score=495.09  Aligned_cols=197  Identities=33%  Similarity=0.483  Sum_probs=185.2

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECC-CCCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             945337118999999876993599998175-5112667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSY-NTSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~-~~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
                      |||||||++|+|.++++.+++.++.+.++. .++++++|||||||||||||++++.     ++|+|+++|||+++|||+.
T Consensus         1 MFTGIIe~~G~v~~i~~~~~~~~~~i~~~~~~~~~l~iG~SIavnGvCLTV~~~~~-----~~~~fdv~~ETl~~T~l~~   75 (213)
T 1i8d_A            1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEING-----NHVSFDLMKETLRITNLGD   75 (213)
T ss_dssp             CBCSCCCEEEEEEEEEECSSEEEEEEECCGGGTTTCCTTCEEEETTEEEEEEEEET-----TEEEEEEEHHHHHHSGGGG
T ss_pred             CCCEECCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCEEEEEEEECC-----CCEEEEEEHHHHHCCCCCC
T ss_conf             94962272999999998799569999917410044778987997789978899818-----9289998045220051110


Q ss_pred             CCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECC-CCCCCEECCCCEEEEEEEEEEEEEECCC
Q ss_conf             565663133543200000476424540100110111002331379875134-2112100235719982345787741685
Q gi|254780347|r   80 WGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLP-HNLEQFIAVKGSVCLNGVSLTVNLVGKN  158 (204)
Q Consensus        80 l~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~-~~~~~~l~~KgsI~idGvSLTV~~~~~~  158 (204)
                      |++|++|||||||++|||+|||+|||||||+|+|.++++.++++.+++..| +.+++|+++|||||+|||||||+++.++
T Consensus        76 l~~G~~VNLEral~~gd~lgGH~V~GHVD~~~~i~~i~~~~~~~~~~~~~~~~~l~~yiv~KGSIaidGvSLTV~~v~~~  155 (213)
T 1i8d_A           76 LKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPT  155 (213)
T ss_dssp             CCTTCEEEEEECCBTTSCCSSCCBCCCCCEEEEEEEEEEETTEEEEEEEESCGGGGGGCCTTCEEEETTEEEECCSBCSS
T ss_pred             CCCCCEEEECCCEECCCCCCCCCEEEEECCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHCCEEEEEEEEEEEEEECCC
T ss_conf             34698686366610886318963798867411388999839967999982435776545413408984179998747398


Q ss_pred             EEEEEEEHHHHCCCCHHHCCCCCEEEEEHHHHHHHH----HHHHCCCC
Q ss_conf             499998444330133002489967469713588999----99860233
Q gi|254780347|r  159 FFDVLLIRHTIEETTWKMHKVGDLINIEVDSMMRYI----ARLYALNT  202 (204)
Q Consensus       159 ~f~v~lIp~Tl~~T~l~~~k~Gd~VNiE~D~l~kyv----~r~~~~~~  202 (204)
                      +|+|+||||||++|||+.+++||+||||+|+|+||+    +|+++.+.
T Consensus       156 ~f~v~lIP~Tl~~T~l~~~~~Gd~VNiE~D~~~kyi~~~~er~l~~~~  203 (213)
T 1i8d_A          156 RFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARE  203 (213)
T ss_dssp             EEEEEECHHHHHHSSGGGCCTTCEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCC
T ss_conf             899999846755463235878998998180457899999999864241

Probab=100.00  E-value=0  Score=467.28  Aligned_cols=187  Identities=20%  Similarity=0.296  Sum_probs=179.5

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECCC-CCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             9453371189999998769935999981755-112667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYN-TSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~-~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
                      |||||||++|+|.++++.+++.++.|.+|.. ++++++|+|||||||||||++++.     +.|.|++ +||+++|||+.
T Consensus         1 MFTGIIe~~G~I~~i~~~~~~~~l~i~~~~~~~~~l~iG~SIavnGvCLTV~~~~~-----~~~~fdv-~ETl~~T~l~~   74 (190)
T 3a35_A            1 MFKGIVQGAGIIKKISKNDDTQRHGITFPKDILESVEKGTVMLVNGCSLTVVRISG-----DVVYFDI-DQAINTTTFRE   74 (190)
T ss_dssp             CBCSCCCEEEEEEEEEECSSCEEEEEECCHHHHHTCCTTCEEEETTEEEEEEEEET-----TEEEEEE-STTTTTSSGGG
T ss_pred             CCCEECCEEEEEEEEEECCCCEEEEEEECHHHHHCCCCCCEEEECCEEEEEEEECC-----CEEEEEH-HHHHHHHHCCC
T ss_conf             95952280999999998799389999947456531667987998979889999637-----5089997-99566523357


Q ss_pred             CCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCE
Q ss_conf             56566313354320000047642454010011011100233137987513421121002357199823457877416854
Q gi|254780347|r   80 WGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNF  159 (204)
Q Consensus        80 l~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~  159 (204)
                      |++|++|||||||++|||+|||+|||||||+|+|.++++.++++.++|++|+++++|+++|||||+|||||||+++.+++
T Consensus        75 l~~g~~VNLEral~~gdrlgGH~V~GHVD~~~~i~~i~~~~~~~~~~~~~p~~~~~yiv~KGSIaidGvSLTV~~v~~~~  154 (190)
T 3a35_A           75 LEVGNKVNLEVRPEFGSLLGKGALTGNIKGVATVDNITEEEDRLKVYIKIPKDLIENILSEDHIGINGVSHSIEEISDDI  154 (190)
T ss_dssp             CCTTCEEEEECCCSSCCCCCSSCBCSCCCEEEEEEEEEEETTEEEEEEECCTTSCSCCCTTSEEEETTEEEECCEEETTE
T ss_pred             CCCCCEECCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCEEEEEECCHHHHCCCCCCCEEEEEEEEEEEEEECCCE
T ss_conf             76695872333433772759974578836656999998615723799986968941455665899965899988871989


Q ss_pred             EEEEEEHHHHCCCCHHHCCCCCEEEEEH-HHHHHH
Q ss_conf             9999844433013300248996746971-358899
Q gi|254780347|r  160 FDVLLIRHTIEETTWKMHKVGDLINIEV-DSMMRY  193 (204)
Q Consensus       160 f~v~lIp~Tl~~T~l~~~k~Gd~VNiE~-D~l~ky  193 (204)
                      |+++|||||+++|||+.+++||+||||+ ||++||
T Consensus       155 f~v~lip~T~~~T~l~~~k~Gd~VNiE~~~~~gk~  189 (190)
T 3a35_A          155 IFINYPKNLSITTNLGTLEKGSDVNVETLNVSNEW  189 (190)
T ss_dssp             EEEEEETTHHHHSGGGGCCTTCEEEEEECC-----
T ss_pred             EEEEECHHHHHHCCCCCCCCCCEEEECCHHCCCCC
T ss_conf             99996807775013555888999997882217678

Probab=100.00  E-value=0  Score=462.78  Aligned_cols=185  Identities=19%  Similarity=0.278  Sum_probs=179.1

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECCC-CCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             9453371189999998769935999981755-112667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYN-TSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~-~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
                      |||||||++|+|.++++.+++.++.|.+|.. ++++++|+|||||||||||++++     ++.|.|++ +||+++|||+.
T Consensus         1 MFTGII~~~G~V~~i~~~~~~~~l~i~~~~~~~~~~~~g~SiavnGvCLTV~~~~-----~~~~~fdv-~ETl~~T~l~~   74 (186)
T 3ddy_A            1 MFRGIVQGRGVIRSISKSEDSQRHGIAFPEGMFQLVDVDTVMLVNGCSNTVVRIL-----GDMVYFDI-DQALGTTTFDG   74 (186)
T ss_dssp             CBCSCCCEEEEEEEEEECSSCEEEEEECCTTTGGGCCTTCEEEETTEEEEEEEEE-----TTEEEEEE-CTTTTTSSGGG
T ss_pred             CCCEECCEEEEEEEEEECCCCEEEEEEECCCHHCCCCCCCEEEECCEEEEEEEEC-----CCEEEEEC-HHEEEEEECCC
T ss_conf             9685127099999999779957999992653010056786899715647999964-----77079811-34134574766


Q ss_pred             CCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCE
Q ss_conf             56566313354320000047642454010011011100233137987513421121002357199823457877416854
Q gi|254780347|r   80 WGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNF  159 (204)
Q Consensus        80 l~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~  159 (204)
                      |++|++|||||||++|||+|||+|||||||+|+|.++++.++++.++|++|+.+++|+++|||||+|||||||+++.+++
T Consensus        75 l~~G~~VNLEral~~gd~lgGH~VsGHVD~~g~i~~i~~~~~~~~~~i~~p~~~~~yi~~KGSIaidGvSLTV~~v~~~~  154 (186)
T 3ddy_A           75 LKEGDQVNLEIHPKFGEVVGRGGLTGNIKGTALVAAIEENDAGFSVLIDIPKGLAENLTVKDDIGIDGISLPITDMSDSI  154 (186)
T ss_dssp             CCTTCEEEEECCC---------CBCSCCCEEEEEEEEECCSSEEEEEEECCTTTCSCCCTTCEEEETTEEEECCEEETTE
T ss_pred             CCCCCEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCEEEEEEEECHHHHHCCCCCCEEEEECCEEEEEEEECCE
T ss_conf             65798683376856533217840799886779999997225318887550135661557884899924168998750989


Q ss_pred             EEEEEEHHHHCCCCHHHCCCCCEEEEEHHHHHHH
Q ss_conf             9999844433013300248996746971358899
Q gi|254780347|r  160 FDVLLIRHTIEETTWKMHKVGDLINIEVDSMMRY  193 (204)
Q Consensus       160 f~v~lIp~Tl~~T~l~~~k~Gd~VNiE~D~l~ky  193 (204)
                      |++++|||||++|||+.+++||+||||  +||||
T Consensus       155 f~v~lIp~Tl~~T~l~~~~~Gd~VNiE--Il~KY  186 (186)
T 3ddy_A          155 ITLNYSRDLLASTNIASLAKDVKVNVE--ILNEW  186 (186)
T ss_dssp             EEEEEEGGGGGTSSGGGCCTTCEEEEE--ECC--
T ss_pred             EEEEEEHHHHHHCCCCCCCCCCEEEEE--EEECC
T ss_conf             999997677642611237389989999--97759

Probab=99.83  E-value=5.2e-21  Score=142.19  Aligned_cols=85  Identities=27%  Similarity=0.356  Sum_probs=48.5

Q ss_pred             EEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHHHCCCCCE
Q ss_conf             45401001101110023313798751342112100235719982345787741685499998444330133002489967
Q gi|254780347|r  103 VSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVGDL  182 (204)
Q Consensus       103 v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~~~k~Gd~  182 (204)
                      .+|+|+++|+|.++++.++...+.+.+|+.+...+....|||+|||||||.++.++.|.++++|||+++|||+.|++|++
T Consensus         2 FTGIIe~~G~v~~i~~~~~~~~~~i~~~~~~~~~l~iG~SIavnGvCLTV~~~~~~~~~fdv~~ETl~~T~l~~l~~G~~   81 (213)
T 1i8d_A            2 FTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDW   81 (213)
T ss_dssp             BCSCCCEEEEEEEEEECSSEEEEEEECCGGGTTTCCTTCEEEETTEEEEEEEEETTEEEEEEEHHHHHHSGGGGCCTTCE
T ss_pred             CCEECCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCEEEEEEEECCCCEEEEEEHHHHHCCCCCCCCCCCE
T ss_conf             49622729999999987995699999174100447789879977899788998189289998045220051110346986


Q ss_pred             EEEEH
Q ss_conf             46971
Q gi|254780347|r  183 INIEV  187 (204)
Q Consensus       183 VNiE~  187 (204)
                      ||||-
T Consensus        82 VNLEr   86 (213)
T 1i8d_A           82 VNVER   86 (213)
T ss_dssp             EEEEE
T ss_pred             EEECC
T ss_conf             86366

Probab=99.82  E-value=2.5e-20  Score=138.16  Aligned_cols=85  Identities=20%  Similarity=0.226  Sum_probs=76.8

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECCCCCC-CCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             9453371189999998769935999981755112-667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSK-MKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~~~~-l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
                      |++|+|+++|+|.++++.++++++.++.|..+.+ +....|||+|||||||.+++     +++|++.++|||+++|||+.
T Consensus        97 ~VsGHVD~~g~i~~i~~~~~~~~~~i~~p~~~~~yi~~KGSIaidGvSLTV~~v~-----~~~f~v~lIp~Tl~~T~l~~  171 (186)
T 3ddy_A           97 GLTGNIKGTALVAAIEENDAGFSVLIDIPKGLAENLTVKDDIGIDGISLPITDMS-----DSIITLNYSRDLLASTNIAS  171 (186)
T ss_dssp             CBCSCCCEEEEEEEEECCSSEEEEEEECCTTTCSCCCTTCEEEETTEEEECCEEE-----TTEEEEEEEGGGGGTSSGGG
T ss_pred             EEEEEEEEEEEEEEEEECCCEEEEEEEECHHHHHCCCCCCEEEEECCEEEEEEEE-----CCEEEEEEEHHHHHHCCCCC
T ss_conf             0799886779999997225318887550135661557884899924168998750-----98999999767764261123


Q ss_pred             CCCCCCCCCCC
Q ss_conf             56566313354
Q gi|254780347|r   80 WGIGTFINLER   90 (204)
Q Consensus        80 l~~G~~VNLE~   90 (204)
                      |++||+||+|-
T Consensus       172 ~~~Gd~VNiEI  182 (186)
T 3ddy_A          172 LAKDVKVNVEI  182 (186)
T ss_dssp             CCTTCEEEEEE
T ss_pred             CCCCCEEEEEE
T ss_conf             73899899999

Probab=99.80  E-value=2.9e-20  Score=137.84  Aligned_cols=86  Identities=14%  Similarity=0.201  Sum_probs=48.3

Q ss_pred             CCEEEEEEEEEEEEEECCCCEEEEEEECCCCCC--CCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             453371189999998769935999981755112--667724653331542365045556686799998656553201355
Q gi|254780347|r    2 FTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSK--MKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         2 FtGIV~~~G~V~~i~~~~~~~~l~i~~~~~~~~--l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
                      .+|+|+++|+|.++++.++.+++.++.|..+.+  +++| |||+|||||||.++.     +++|.+.++|||++.|||+.
T Consensus        98 V~GHVD~~~~i~~i~~~~~~~~~~~~~p~~~~~yiv~KG-SIaidGvSLTV~~v~-----~~~f~v~lip~T~~~T~l~~  171 (190)
T 3a35_A           98 LTGNIKGVATVDNITEEEDRLKVYIKIPKDLIENILSED-HIGINGVSHSIEEIS-----DDIIFINYPKNLSITTNLGT  171 (190)
T ss_dssp             BCSCCCEEEEEEEEEEETTEEEEEEECCTTSCSCCCTTS-EEEETTEEEECCEEE-----TTEEEEEEETTHHHHSGGGG
T ss_pred             EEEEECCCEEEEEEEEECCCEEEEEECCHHHHCCCCCCC-EEEEEEEEEEEEEEC-----CCEEEEEECHHHHHHCCCCC
T ss_conf             578836656999998615723799986968941455665-899965899988871-----98999996807775013555


Q ss_pred             CCCCCCCCCCCCCH
Q ss_conf             56566313354320
Q gi|254780347|r   80 WGIGTFINLERSVK   93 (204)
Q Consensus        80 l~~G~~VNLE~a~~   93 (204)
                      +++||+||+|-..-
T Consensus       172 ~k~Gd~VNiE~~~~  185 (190)
T 3a35_A          172 LEKGSDVNVETLNV  185 (190)
T ss_dssp             CCTTCEEEEEECC-
T ss_pred             CCCCCEEEECCHHC
T ss_conf             88899999788221

Probab=99.80  E-value=8.4e-20  Score=135.10  Aligned_cols=86  Identities=19%  Similarity=0.275  Sum_probs=58.5

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECCC-CCC--CCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCC
Q ss_conf             9453371189999998769935999981755-112--6677246533315423650455566867999986565532013
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYN-TSK--MKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNI   77 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~-~~~--l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l   77 (204)
                      |.+|+|.++|+|.++.+.++.+++.+..+.. +.+  +++| |||+|||+|||.++.     +++|++.++|||+++|||
T Consensus        98 ~V~GHVD~~~~i~~i~~~~~~~~~~~~~~~~~~~~yiv~KG-sIaidGvSLTV~~v~-----~~~f~v~lIP~Tl~~T~l  171 (208)
T 1kzl_A           98 FVQGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKG-YIALDGTSLTITHVD-----DSTFSIMMISYTQSKVIM  171 (208)
T ss_dssp             CBCSCCCEEEEEEEEEEETTEEEEEEEESSGGGGGGCCTTC-EEEETTEEEEEEEEC-----SSCEEEEECHHHHTTSGG
T ss_pred             EEEEECCEEEEEEEEEECCCCEEEEEEEEEHHHHCCEEECC-EEEEEEEEEEEEEEC-----CCEEEEEEEHHHHHHCCC
T ss_conf             47887408999999997699637999951011221246501-099850489998672-----998999997788654511


Q ss_pred             CCCCCCCCCCCCCCC
Q ss_conf             555656631335432
Q gi|254780347|r   78 ASWGIGTFINLERSV   92 (204)
Q Consensus        78 ~~l~~G~~VNLE~a~   92 (204)
                      +.+++||+||+|.-+
T Consensus       172 ~~~~~Gd~VNiE~D~  186 (208)
T 1kzl_A          172 AKKNVGDLVNVEVDQ  186 (208)
T ss_dssp             GGCCTTCEEEEEECT
T ss_pred             CCCCCCCEEEEEEHH
T ss_conf             148789999986414

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 92.7 bits (230), Expect = 2e-20
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 1/102 (0%)

Query: 97  RLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPHN-LEQFIAVKGSVCLNGVSLTVNLV 155
           R+ GH V GH+D   EI+     G+++          + ++I  KG + L+G SLT+  V
Sbjct: 1   RMGGHFVQGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHV 60

Query: 156 GKNFFDVLLIRHTIEETTWKMHKVGDLINIEVDSMMRYIARL 197
             + F +++I +T  +       VGDL+N+EVD + +Y  +L
Sbjct: 61  DDSTFSIMMISYTQSKVIMAKKNVGDLVNVEVDQIGKYTEKL 102

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Escherichia coli [TaxId: 562]

 Score = 87.0 bits (215), Expect = 1e-18
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 1/100 (1%)

Query: 98  LDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPH-NLEQFIAVKGSVCLNGVSLTVNLVG 156
           + GHL+SGHI  T E+  +    ++      +    L ++I  KG + ++G+SLTV  V 
Sbjct: 1   IGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVT 60

Query: 157 KNFFDVLLIRHTIEETTWKMHKVGDLINIEVDSMMRYIAR 196
              F V LI  T+E TT    K+G  +NIE+D   + +  
Sbjct: 61  PTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVD 100

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Escherichia coli [TaxId: 562]

 Score = 70.7 bits (173), Expect = 8e-14
 Identities = 23/84 (27%), Positives = 40/84 (47%)

Query: 103 VSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDV 162
            +G + GT +++ +D   +     + LP ++   +    SV  NG  LTV  +  N    
Sbjct: 2   FTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSF 61

Query: 163 LLIRHTIEETTWKMHKVGDLINIE 186
            L++ T+  T     KVGD +N+E
Sbjct: 62  DLMKETLRITNLGDLKVGDWVNVE 85

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 58.4 bits (141), Expect = 4e-10
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 104 SGHIDGTVEILFLDFIGD-SMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDV 162
           +G ++    +  +    D     ++  P  L+       S+ +NG  LTV    +  F V
Sbjct: 3   TGLVEAIGVVKDVQGTIDNGFAMKIEAPQILDD-CHTGDSIAVNGTCLTVTDFDRYHFTV 61

Query: 163 LLIRHTIEETTWKMHKVGDLINIEVD 188
            +   ++  T     K GD +N+E  
Sbjct: 62  GIAPESLRLTNLGQCKAGDPVNLERA 87

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 41.1 bits (96), Expect = 6e-05
 Identities = 14/89 (15%), Positives = 31/89 (34%), Gaps = 7/89 (7%)

Query: 3  TGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSK--MKLGCSIAHAGICLTVVRLSEEHSVD 60
           G V  + +I+      + +              +     IA  G  LT+  +      D
Sbjct: 8  QGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHVD-----D 62

Query: 61 NWYEVEVWAETNRITNIASWGIGTFINLE 89
          + + + + + T     +A   +G  +N+E
Sbjct: 63 STFSIMMISYTQSKVIMAKKNVGDLVNVE 91

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Escherichia coli [TaxId: 562]

 Score = 44.6 bits (105), Expect = 6e-06
 Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 7/91 (7%)

Query: 1  MFTGIVTDIGKIIAMTPIAK--GMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHS 58
          + +G +    ++  +        +  +V  S     +     I   GI LTV  ++    
Sbjct: 5  LMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVT---- 60

Query: 59 VDNWYEVEVWAETNRITNIASWGIGTFINLE 89
              + V +  ET   T +    +G  +N+E
Sbjct: 61 -PTRFCVHLIPETLERTTLGKKKLGARVNIE 90

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Escherichia coli [TaxId: 562]

 Score = 81.9 bits (202), Expect = 3e-17
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 1  MFTGIVTDIGKIIAMTPIAKGMRLRV-MTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSV 59
          MFTGIV    K++++          V +  +    ++ G S+AH G CLTV         
Sbjct: 1  MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTV-----TEIN 55

Query: 60 DNWYEVEVWAETNRITNIASWGIGTFINLERSVKLGD 96
           N    ++  ET RITN+    +G ++N+ER+ K  D
Sbjct: 56 GNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSD 92

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 72.7 bits (178), Expect = 2e-14
 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 6/95 (6%)

Query: 1  MFTGIVTDIGKIIAMTPIAK-GMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSV 59
          MFTG+V  IG +  +      G  +++           G SIA  G CLTV         
Sbjct: 1  MFTGLVEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVT-----DFD 55

Query: 60 DNWYEVEVWAETNRITNIASWGIGTFINLERSVKL 94
             + V +  E+ R+TN+     G  +NLER+V  
Sbjct: 56 RYHFTVGIAPESLRLTNLGQCKAGDPVNLERAVLS 90

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=2.6e-41  Score=259.54  Aligned_cols=108  Identities=30%  Similarity=0.515  Sum_probs=103.7

Q ss_pred             CCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECC-CCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHH
Q ss_conf             0476424540100110111002331379875134-211210023571998234578774168549999844433013300
Q gi|254780347|r   97 RLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLP-HNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWK  175 (204)
Q Consensus        97 ~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~-~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~  175 (204)
                      |+|||+||||||++|+|+++++.++++.+++.+| +.+.+|++.|||||+|||||||+++.+++|++++|||||++|||+
T Consensus         1 r~~GH~v~GHVd~~g~I~~i~~~~~~~~~~i~~~~~~~~~~l~~~~SIavnGvcLTV~~~~~~~f~v~lipETl~~Tnl~   80 (110)
T d1kzla2           1 RMGGHFVQGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHVDDSTFSIMMISYTQSKVIMA   80 (110)
T ss_dssp             CSSSCCBCSCCCEEEEEEEEEEETTEEEEEEEESSGGGGGGCCTTCEEEETTEEEEEEEECSSCEEEEECHHHHTTSGGG
T ss_pred             CCCEEEEEEEECEEEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHEEECCCCEEEEEEECCCEEEEEEHHHHHHHCCCC
T ss_conf             94304350795689999999987985213563250555331001214774783899972569789998769987656000


Q ss_pred             HCCCCCEEEEEHHHHHHHHHHHHCCCCCC
Q ss_conf             24899674697135889999986023359
Q gi|254780347|r  176 MHKVGDLINIEVDSMMRYIARLYALNTSQ  204 (204)
Q Consensus       176 ~~k~Gd~VNiE~D~l~kyv~r~~~~~~~~  204 (204)
                      .+++||+||||+|+||||++|+++.+.++
T Consensus        81 ~~~~G~~VNLE~D~lak~i~~~~~~~~~~  109 (110)
T d1kzla2          81 KKNVGDLVNVEVDQIGKYTEKLVEAHIAD  109 (110)
T ss_dssp             GCCTTCEEEEEECTHHHHHHHHHHHHTTT
T ss_pred             CCCCCCEEEEEEHHHHHHHHHHHHHHCCC
T ss_conf             17799989982166999999998765269

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.4e-38  Score=240.13  Aligned_cols=105  Identities=33%  Similarity=0.454  Sum_probs=97.1

Q ss_pred             CCCCEEEECCCCHHHHHHHCCCCCEEEEEEECC-CCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHHH
Q ss_conf             476424540100110111002331379875134-2112100235719982345787741685499998444330133002
Q gi|254780347|r   98 LDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLP-HNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKM  176 (204)
Q Consensus        98 lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~-~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~~  176 (204)
                      +|||+||||||++|+|.++++.+++..+++.+| +.+.+|+..|||||+|||||||+++.+++|++++|||||++|||+.
T Consensus         1 igGH~vsGhV~~~G~I~~i~~~~~~~~~~i~~~~~~~~~~i~~g~SIavnGvcLTV~~~~~~~f~v~li~ETl~~T~l~~   80 (113)
T d1i8da2           1 IGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGK   80 (113)
T ss_dssp             CSSCCBCCCCCEEEEEEEEEEETTEEEEEEEESCGGGGGGCCTTCEEEETTEEEECCSBCSSEEEEEECHHHHHHSSGGG
T ss_pred             CCCEEEEEEECEEEEEEEEEECCCCEEEEEEEEHHHHHHHHHHHHEEECCCCEEEEEEECCCEEEEEEEHHHHHHCCCCC
T ss_conf             98501606968799999999738834888874137776554323237615725887633487899996789865491124


Q ss_pred             CCCCCEEEEEHHHHHHH----HHHHHCCCC
Q ss_conf             48996746971358899----999860233
Q gi|254780347|r  177 HKVGDLINIEVDSMMRY----IARLYALNT  202 (204)
Q Consensus       177 ~k~Gd~VNiE~D~l~ky----v~r~~~~~~  202 (204)
                      |++||+||||+|+++||    ++|+++.++
T Consensus        81 ~~~G~~VNlE~D~~~k~i~~~~~~~~~~~~  110 (113)
T d1i8da2          81 KKLGARVNIEIDPQTQAVVDTVERVLAARE  110 (113)
T ss_dssp             CCTTCEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEEECHHHHHHHHHHHHHHHHH
T ss_conf             768998899383515799999999875514

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=1.5e-27  Score=179.10  Aligned_cols=88  Identities=26%  Similarity=0.358  Sum_probs=84.9

Q ss_pred             EEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHHHCCCCC
Q ss_conf             24540100110111002331379875134211210023571998234578774168549999844433013300248996
Q gi|254780347|r  102 LVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVGD  181 (204)
Q Consensus       102 ~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~~~k~Gd  181 (204)
                      +.+||||++|+|.++++.++++.++|++|+.+.+|+..|||||+|||||||+++.+++|++++||||+++|||+.+++|+
T Consensus         1 MFtGiV~~~g~I~~i~~~~~~~~~~i~~~~~~~~~~~~g~SIavnGvcLTV~~~~~~~f~~~ii~eTl~~T~l~~~~~G~   80 (93)
T d1i8da1           1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGD   80 (93)
T ss_dssp             CBCSCCCEEEEEEEEEECSSEEEEEEECCGGGTTTCCTTCEEEETTEEEEEEEEETTEEEEEEEHHHHHHSGGGGCCTTC
T ss_pred             CCCEEECEEEEEEEEEECCCCEEEEEEECHHHHHHCCCCCEEEECCEEEEEEECCCCCEEEEEEHHHHHHCCHHHCCCCC
T ss_conf             96842344999999998899499999989788630556876997778899996277518999967883117220166899


Q ss_pred             EEEEEHHH
Q ss_conf             74697135
Q gi|254780347|r  182 LINIEVDS  189 (204)
Q Consensus       182 ~VNiE~D~  189 (204)
                      +||||.-+
T Consensus        81 ~VNlErsl   88 (93)
T d1i8da1          81 WVNVERAA   88 (93)
T ss_dssp             EEEEEECC
T ss_pred             EEEECCCC
T ss_conf             99978487

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.93  E-value=3.6e-27  Score=176.85  Aligned_cols=90  Identities=18%  Similarity=0.239  Sum_probs=81.9

Q ss_pred             EEEECCCCHHHHHHHCCCC-CEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHHHCCCC
Q ss_conf             2454010011011100233-137987513421121002357199823457877416854999984443301330024899
Q gi|254780347|r  102 LVSGHIDGTVEILFLDFIG-DSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVG  180 (204)
Q Consensus       102 ~v~GhVd~~~~i~~i~~~~-~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~~~k~G  180 (204)
                      +.+||||++|+|.++++.+ +++.+++..|+ +.+++..|||||+|||||||+++.+++|++++|||||++|||+.+++|
T Consensus         1 MFTGiV~~~g~I~~i~~~~~~~~~~~i~~~~-~~~~i~~g~SIavnGvcLTV~~~~~~~f~~~lipeTl~~T~l~~~~~G   79 (92)
T d1kzla1           1 MFTGLVEAIGVVKDVQGTIDNGFAMKIEAPQ-ILDDCHTGDSIAVNGTCLTVTDFDRYHFTVGIAPESLRLTNLGQCKAG   79 (92)
T ss_dssp             CBCSCCCEEEEEEEEEEETTTEEEEEEECGG-GCTTCCTTCEEEETTEEEEEEEECSSEEEEEECHHHHHHSSGGGCCTT
T ss_pred             CCCCCCCEEEEEEEEEECCCCEEEEEEECCH-HHHHCCCCCEEEECCEEEEEEEECCCEEEEEEEHHHCCCCCHHHCCCC
T ss_conf             9786508399999999879995999998707-764263476698566777767611104999997376156422217679


Q ss_pred             CEEEEEHHHHHH
Q ss_conf             674697135889
Q gi|254780347|r  181 DLINIEVDSMMR  192 (204)
Q Consensus       181 d~VNiE~D~l~k  192 (204)
                      |+||||.|+++.
T Consensus        80 ~~VNlE~sl~a~   91 (92)
T d1kzla1          80 DPVNLERAVLSS   91 (92)
T ss_dssp             CEEEEEECCCCS
T ss_pred             CEEEECCCCCCC
T ss_conf             999937125588

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=4.5e-32  Score=205.51  Aligned_cols=92  Identities=33%  Similarity=0.536  Sum_probs=87.1

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECCCC-CCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             94533711899999987699359999817551-12667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNT-SKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~~-~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
                      ||||||+++|+|.++++.++++++.++.|..+ ..+.+|+|||||||||||++++     +++|.|+++|||+++|||+.
T Consensus         1 MFtGiV~~~g~I~~i~~~~~~~~~~i~~~~~~~~~~~~g~SIavnGvcLTV~~~~-----~~~f~~~ii~eTl~~T~l~~   75 (93)
T d1i8da1           1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEIN-----GNHVSFDLMKETLRITNLGD   75 (93)
T ss_dssp             CBCSCCCEEEEEEEEEECSSEEEEEEECCGGGTTTCCTTCEEEETTEEEEEEEEE-----TTEEEEEEEHHHHHHSGGGG
T ss_pred             CCCEEECEEEEEEEEEECCCCEEEEEEECHHHHHHCCCCCEEEECCEEEEEEECC-----CCCEEEEEEHHHHHHCCHHH
T ss_conf             9684234499999999889949999998978863055687699777889999627-----75189999678831172201


Q ss_pred             CCCCCCCCCCCCCHHHHC
Q ss_conf             565663133543200000
Q gi|254780347|r   80 WGIGTFINLERSVKLGDR   97 (204)
Q Consensus        80 l~~G~~VNLE~a~~~g~~   97 (204)
                      |++|++||||||||+||+
T Consensus        76 ~~~G~~VNlErslk~gde   93 (93)
T d1i8da1          76 LKVGDWVNVERAAKFSDE   93 (93)
T ss_dssp             CCTTCEEEEEECCBTTSC
T ss_pred             CCCCCEEEECCCCCCCCC
T ss_conf             668999997848768898

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.96  E-value=2.6e-30  Score=195.21  Aligned_cols=90  Identities=31%  Similarity=0.475  Sum_probs=83.1

Q ss_pred             CCCEEEEEEEEEEEEEEC-CCCEEEEEEECCCCCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             945337118999999876-9935999981755112667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPI-AKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~-~~~~~l~i~~~~~~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
                      |||||||++|+|.++++. +.++++.+..+..++++.+|+|||||||||||++++     +++|.|+++|||+++|||+.
T Consensus         1 MFTGiV~~~g~I~~i~~~~~~~~~~~i~~~~~~~~i~~g~SIavnGvcLTV~~~~-----~~~f~~~lipeTl~~T~l~~   75 (92)
T d1kzla1           1 MFTGLVEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFD-----RYHFTVGIAPESLRLTNLGQ   75 (92)
T ss_dssp             CBCSCCCEEEEEEEEEEETTTEEEEEEECGGGCTTCCTTCEEEETTEEEEEEEEC-----SSEEEEEECHHHHHHSSGGG
T ss_pred             CCCCCCCEEEEEEEEEECCCCEEEEEEECCHHHHHCCCCCEEEECCEEEEEEEEC-----CCEEEEEEEHHHCCCCCHHH
T ss_conf             9786508399999999879995999998707764263476698566777767611-----10499999737615642221


Q ss_pred             CCCCCCCCCCCCCHHH
Q ss_conf             5656631335432000
Q gi|254780347|r   80 WGIGTFINLERSVKLG   95 (204)
Q Consensus        80 l~~G~~VNLE~a~~~g   95 (204)
                      |++|++|||||||++.
T Consensus        76 ~~~G~~VNlE~sl~a~   91 (92)
T d1kzla1          76 CKAGDPVNLERAVLSS   91 (92)
T ss_dssp             CCTTCEEEEEECCCCS
T ss_pred             CCCCCEEEECCCCCCC
T ss_conf             7679999937125588

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=6.3e-25  Score=163.68  Aligned_cols=86  Identities=16%  Similarity=0.211  Sum_probs=78.3

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECC-CC-CCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCC
Q ss_conf             945337118999999876993599998175-51-1266772465333154236504555668679999865655320135
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSY-NT-SKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIA   78 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~-~~-~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~   78 (204)
                      |++|+|+++|+|.++.+.++..++.+..+. .+ ..+.+|+|||||||||||+++.     +++|+|+++|||+++|||+
T Consensus         5 ~vsGhV~~~G~I~~i~~~~~~~~~~i~~~~~~~~~~i~~g~SIavnGvcLTV~~~~-----~~~f~v~li~ETl~~T~l~   79 (113)
T d1i8da2           5 LMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVT-----PTRFCVHLIPETLERTTLG   79 (113)
T ss_dssp             CBCCCCCEEEEEEEEEEETTEEEEEEEESCGGGGGGCCTTCEEEETTEEEECCSBC-----SSEEEEEECHHHHHHSSGG
T ss_pred             EEEEEECEEEEEEEEEECCCCEEEEEEEEHHHHHHHHHHHHEEECCCCEEEEEEEC-----CCEEEEEEEHHHHHHCCCC
T ss_conf             16069687999999997388348888741377765543232376157258876334-----8789999678986549112


Q ss_pred             CCCCCCCCCCCCC
Q ss_conf             5565663133543
Q gi|254780347|r   79 SWGIGTFINLERS   91 (204)
Q Consensus        79 ~l~~G~~VNLE~a   91 (204)
                      .|++|++||||--
T Consensus        80 ~~~~G~~VNlE~D   92 (113)
T d1i8da2          80 KKKLGARVNIEID   92 (113)
T ss_dssp             GCCTTCEEEEEEC
T ss_pred             CCCCCCEEEEEEE
T ss_conf             4768998899383

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Riboflavin synthase
domain: Riboflavin synthase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.90  E-value=6.2e-24  Score=157.90  Aligned_cols=88  Identities=16%  Similarity=0.217  Sum_probs=78.4

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECC-CC-CCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCC
Q ss_conf             945337118999999876993599998175-51-1266772465333154236504555668679999865655320135
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSY-NT-SKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIA   78 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~-~~-~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~   78 (204)
                      |-+|+|+++|+|.++++.++++++.+.++. .+ ..+..|+|||||||||||++++     +++|+|+++|||+++|||+
T Consensus         6 ~v~GHVd~~g~I~~i~~~~~~~~~~i~~~~~~~~~~l~~~~SIavnGvcLTV~~~~-----~~~f~v~lipETl~~Tnl~   80 (110)
T d1kzla2           6 FVQGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHVD-----DSTFSIMMISYTQSKVIMA   80 (110)
T ss_dssp             CBCSCCCEEEEEEEEEEETTEEEEEEEESSGGGGGGCCTTCEEEETTEEEEEEEEC-----SSCEEEEECHHHHTTSGGG
T ss_pred             EEEEEECEEEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHEEECCCCEEEEEEEC-----CCEEEEEEHHHHHHHCCCC
T ss_conf             35079568999999998798521356325055533100121477478389997256-----9789998769987656000


Q ss_pred             CCCCCCCCCCCCCCH
Q ss_conf             556566313354320
Q gi|254780347|r   79 SWGIGTFINLERSVK   93 (204)
Q Consensus        79 ~l~~G~~VNLE~a~~   93 (204)
                      .|++|++||||+.+-
T Consensus        81 ~~~~G~~VNLE~D~l   95 (110)
T d1kzla2          81 KKNVGDLVNVEVDQI   95 (110)
T ss_dssp             GCCTTCEEEEEECTH
T ss_pred             CCCCCCEEEEEEHHH
T ss_conf             177999899821669

 Score = 92.1 bits (229), Expect = 5e-20
 Identities = 15/93 (16%), Positives = 40/93 (43%)

Query: 102 LVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFD 161
            ++G+I G   +  +    D +   + +P +L + I  +  + +NGVS ++  +  +   
Sbjct: 3   ALTGNIKGVATVDNITEEEDRLKVYIKIPKDLIENILSEDHIGINGVSHSIEEISDDIIF 62

Query: 162 VLLIRHTIEETTWKMHKVGDLINIEVDSMMRYI 194
           +   ++    T     + G  +N+E  ++    
Sbjct: 63  INYPKNLSITTNLGTLEKGSDVNVETLNVSNEW 95

 Score = 77.5 bits (191), Expect = 1e-15
 Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 3/95 (3%)

Query: 103 VSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDV 162
             G + G   I  +    D+    ++ P ++ + +     + +NG SLTV  +  +    
Sbjct: 2   FKGIVQGAGIIKKISKNDDTQRHGITFPKDILESVEKGTVMLVNGCSLTVVRISGDVVYF 61

Query: 163 LLIRHTIEETTWKMHKVGDLINIEVDSMMRYIARL 197
             I   I  TT++  +VG+ +N+EV     + + L
Sbjct: 62  -DIDQAINTTTFRELEVGNKVNLEVR--PEFGSLL 93

 Score = 86.7 bits (215), Expect = 2e-18
 Identities = 15/92 (16%), Positives = 39/92 (42%), Gaps = 2/92 (2%)

Query: 102 LVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFD 161
            ++G+I GT  +  ++         + +P  L + + VK  + ++G+SL +  +  +   
Sbjct: 3   GLTGNIKGTALVAAIEENDAGFSVLIDIPKGLAENLTVKDDIGIDGISLPITDMSDSIIT 62

Query: 162 VLLIRHTIEETTWKMHKVGDLINIEVDSMMRY 193
           +   R  +  T          +N+E+  +  +
Sbjct: 63  LNYSRDLLASTNIASLAKDVKVNVEI--LNEW 92

 Score = 77.2 bits (190), Expect = 1e-15
 Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 3/95 (3%)

Query: 103 VSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDV 162
             G + G   I  +    DS    ++ P  + Q + V   + +NG S TV  +  +    
Sbjct: 2   FRGIVQGRGVIRSISKSEDSQRHGIAFPEGMFQLVDVDTVMLVNGCSNTVVRILGDMVYF 61

Query: 163 LLIRHTIEETTWKMHKVGDLINIEVDSMMRYIARL 197
             I   +  TT+   K GD +N+E+    ++   +
Sbjct: 62  -DIDQALGTTTFDGLKEGDQVNLEIH--PKFGEVV 93

 Score = 75.2 bits (185), Expect = 6e-15
 Identities = 15/82 (18%), Positives = 30/82 (36%)

Query: 107 IDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIR 166
           ++    +  +    D+ +        +        S+ +NG  LTV    +  F V +  
Sbjct: 1   VEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFDRYHFTVGIAP 60

Query: 167 HTIEETTWKMHKVGDLINIEVD 188
            ++  T     K GD +N+E  
Sbjct: 61  ESLRLTNLGQCKAGDPVNLERA 82

 Score = 75.9 bits (187), Expect = 4e-15
 Identities = 22/78 (28%), Positives = 37/78 (47%)

Query: 109 GTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHT 168
           GT +++ +D   +     + LP ++   +    SV  NG  LTV  +  N     L++ T
Sbjct: 2   GTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKET 61

Query: 169 IEETTWKMHKVGDLINIE 186
           +  T     KVGD +N+E
Sbjct: 62  LRITNLGDLKVGDWVNVE 79

 Score = 57.8 bits (139), Expect = 1e-09
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%)

Query: 96  DRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPHN-LEQFIAVKGSVCLNGVSLTVNL 154
           D + GHL+SGHI  T E+  +    ++      +  + L ++I  KG + ++G+SLTV  
Sbjct: 7   DEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGE 66

Query: 155 VGKNFFDVLLIRHTIEETTWKMHKVGDLINIEVDSMMRYIARL 197
           V    F V LI  T+E TT    K+G  +NIE+D   + +   
Sbjct: 67  VTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDT 109

 Score = 57.8 bits (138), Expect = 1e-09
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 95  GDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPH-NLEQFIAVKGSVCLNGVSLTVN 153
           G R+ GH V GH+D   EI+     G+++          + ++I  KG + L+G SLT+ 
Sbjct: 4   GLRMGGHFVQGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTIT 63

Query: 154 LVGKNFFDVLLIRHTIEETTWKMHKVGDLINIEVDS 189
            V  + F +++I +T  +       VGDL+N+EVD 
Sbjct: 64  HVDDSTFSIMMISYTQSKVIMAKKNVGDLVNVEVDQ 99

 Score = 85.9 bits (213), Expect = 4e-18
 Identities = 12/97 (12%), Positives = 36/97 (37%), Gaps = 6/97 (6%)

Query: 1  MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSK-MKLGCSIAHAGICLTVVRLSEEHSV 59
            TG +  +  +  +T     +++ +    +  + +     I   G+  ++  +S     
Sbjct: 3  ALTGNIKGVATVDNITEEEDRLKVYIKIPKDLIENILSEDHIGINGVSHSIEEIS----- 57

Query: 60 DNWYEVEVWAETNRITNIASWGIGTFINLERSVKLGD 96
          D+   +      +  TN+ +   G+ +N+E      +
Sbjct: 58 DDIIFINYPKNLSITTNLGTLEKGSDVNVETLNVSNE 94

 Score = 88.3 bits (219), Expect = 7e-19
 Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 7/99 (7%)

Query: 1  MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYN-TSKMKLGCSIAHAGICLTVVRLSEEHSV 59
          MF GIV   G I  ++      R  +    +    ++ G  +   G  LTVVR+S     
Sbjct: 1  MFKGIVQGAGIIKKISKNDDTQRHGITFPKDILESVEKGTVMLVNGCSLTVVRIS----- 55

Query: 60 DNWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRL 98
           +    ++  +    T      +G  +NLE   + G  L
Sbjct: 56 GDVVYFDI-DQAINTTTFRELEVGNKVNLEVRPEFGSLL 93

 Score = 84.4 bits (209), Expect = 9e-18
 Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 6/94 (6%)

Query: 1  MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSK-MKLGCSIAHAGICLTVVRLSEEHSV 59
            TG +     + A+     G  + +      ++ + +   I   GI L +  +S     
Sbjct: 3  GLTGNIKGTALVAAIEENDAGFSVLIDIPKGLAENLTVKDDIGIDGISLPITDMS----- 57

Query: 60 DNWYEVEVWAETNRITNIASWGIGTFINLERSVK 93
          D+   +    +    TNIAS      +N+E   +
Sbjct: 58 DSIITLNYSRDLLASTNIASLAKDVKVNVEILNE 91

 Score = 86.4 bits (214), Expect = 3e-18
 Identities = 20/99 (20%), Positives = 35/99 (35%), Gaps = 7/99 (7%)

Query: 1  MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYN-TSKMKLGCSIAHAGICLTVVRLSEEHSV 59
          MF GIV   G I +++      R  +         + +   +   G   TVVR+      
Sbjct: 1  MFRGIVQGRGVIRSISKSEDSQRHGIAFPEGMFQLVDVDTVMLVNGCSNTVVRIL----- 55

Query: 60 DNWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRL 98
           +    ++  +    T       G  +NLE   K G+ +
Sbjct: 56 GDMVYFDI-DQALGTTTFDGLKEGDQVNLEIHPKFGEVV 93

 Score = 76.3 bits (188), Expect = 3e-15
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 6/90 (6%)

Query: 6  VTDIGKIIAMTPIAK-GMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYE 64
          V  IG +  +      G  +++           G SIA  G CLTV            + 
Sbjct: 1  VEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFD-----RYHFT 55

Query: 65 VEVWAETNRITNIASWGIGTFINLERSVKL 94
          V +  E+ R+TN+     G  +NLER+V  
Sbjct: 56 VGIAPESLRLTNLGQCKAGDPVNLERAVLS 85

 Score = 72.1 bits (177), Expect = 6e-14
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 9  IGKIIAMTPIAKGMRLRV-MTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEV 67
            K++++          V +  +    ++ G S+AH G CLTV  ++      N    ++
Sbjct: 3  TAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEIN-----GNHVSFDL 57

Query: 68 WAETNRITNIASWGIGTFINLERSVKL 94
            ET RITN+    +G ++N+ER+ K 
Sbjct: 58 MKETLRITNLGDLKVGDWVNVERAAKF 84

Probab=99.97  E-value=8.8e-31  Score=200.24  Aligned_cols=93  Identities=22%  Similarity=0.252  Sum_probs=88.0

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECCC-CCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             9453371189999998769935999981755-112667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYN-TSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~-~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
                      ||||||+++|+|.++++.++++++.+++|.. ++.+++|+|||||||||||+++.+     ++|.|+ +|||+++|||+.
T Consensus         1 MFtG~I~~~g~I~~i~~~~~~~~~~i~~~~~~~~~i~~~~SIavnGvcLTV~~v~~-----~~f~v~-ipeTl~~T~l~~   74 (94)
T 3ddy_A            1 MFRGIVQGRGVIRSISKSEDSQRHGIAFPEGMFQLVDVDTVMLVNGCSNTVVRILG-----DMVYFD-IDQALGTTTFDG   74 (94)
T ss_dssp             CBCSCCCEEEEEEEEEECSSCEEEEEECCTTTGGGCCTTCEEEETTEEEEEEEEET-----TEEEEE-ECTTTTTSSGGG
T ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCEEEEEEEECC-----CEEEEE-CHHHHHHCCHHH
T ss_conf             98824038999999997699389999917764342467878996879999999679-----879998-169730200601


Q ss_pred             CCCCCCCCCCCCCHHHHCCC
Q ss_conf             56566313354320000047
Q gi|254780347|r   80 WGIGTFINLERSVKLGDRLD   99 (204)
Q Consensus        80 l~~G~~VNLE~a~~~g~~lg   99 (204)
                      |++||+|||||||+++||+|
T Consensus        75 ~~~G~~VNlE~~l~~~~rlG   94 (94)
T 3ddy_A           75 LKEGDQVNLEIHPKFGEVVG   94 (94)
T ss_dssp             CCTTCEEEEECCC-------
T ss_pred             CCCCCEEEEECCCCCCCCCC
T ss_conf             74799985420666898608

Probab=99.96  E-value=2.4e-30  Score=197.67  Aligned_cols=93  Identities=25%  Similarity=0.330  Sum_probs=88.3

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECCCC-CCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             94533711899999987699359999817551-12667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNT-SKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~~-~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
                      ||||||+++|+|.++++.++++++.+++|+.+ ..+.+|+|||||||||||+++.+     ++|.|+ +|||+++|||+.
T Consensus         1 MFtG~I~~~g~V~~i~~~~~~~~~~i~~~~~~~~~~~~g~SIavdGvsLTV~~~~~-----~~f~~~-ipeTl~~T~l~~   74 (94)
T 3a35_A            1 MFKGIVQGAGIIKKISKNDDTQRHGITFPKDILESVEKGTVMLVNGCSLTVVRISG-----DVVYFD-IDQAINTTTFRE   74 (94)
T ss_dssp             CBCSCCCEEEEEEEEEECSSCEEEEEECCHHHHHTCCTTCEEEETTEEEEEEEEET-----TEEEEE-ESTTTTTSSGGG
T ss_pred             CCCEECCEEEEEEEEEECCCCEEEEEEECHHHHHHCCCCCEEEECCEEEEEEECCC-----CHHHHH-HHHHHHHHHCCC
T ss_conf             96920280999999998899289999977166644557873897778648984363-----202134-566666420231


Q ss_pred             CCCCCCCCCCCCCHHHHCCC
Q ss_conf             56566313354320000047
Q gi|254780347|r   80 WGIGTFINLERSVKLGDRLD   99 (204)
Q Consensus        80 l~~G~~VNLE~a~~~g~~lg   99 (204)
                      |++|++|||||||++|||+|
T Consensus        75 ~~~G~~VNlE~~l~~~~rlg   94 (94)
T 3a35_A           75 LEVGNKVNLEVRPEFGSLLG   94 (94)
T ss_dssp             CCTTCEEEEECCCSSCCCCC
T ss_pred             CCCCCCCCCCCCCCCEEECC
T ss_conf             02366335134323301048

Probab=99.96  E-value=1.1e-29  Score=193.89  Aligned_cols=91  Identities=13%  Similarity=0.176  Sum_probs=86.7

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECCCC-CCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             94533711899999987699359999817551-12667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNT-SKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~~-~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
                      ||||||+++|+|.++.+.++++++.+++|..+ +.+.+|+|||||||||||+++.     +++|+|+++|||+++|||+.
T Consensus         3 MftGiI~~~g~I~~i~~~~~~~~~~i~~~~~~~~~l~~g~SIavdGvcLTV~~~~-----~~~f~v~l~~eTl~~T~l~~   77 (96)
T 3a35_A            3 ALTGNIKGVATVDNITEEEDRLKVYIKIPKDLIENILSEDHIGINGVSHSIEEIS-----DDIIFINYPKNLSITTNLGT   77 (96)
T ss_dssp             CBCSCCCEEEEEEEEEEETTEEEEEEECCTTSCSCCCTTSEEEETTEEEECCEEE-----TTEEEEEEETTHHHHSGGGG
T ss_pred             CEEEEECCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCEEEECCCCEEEEEEE-----CCEEEEEECCHHHHHCCCCC
T ss_conf             3356740230454310125421577860541000120157389625623887660-----88999995705675111566


Q ss_pred             CCCCCCCCCCCCCHHHH
Q ss_conf             56566313354320000
Q gi|254780347|r   80 WGIGTFINLERSVKLGD   96 (204)
Q Consensus        80 l~~G~~VNLE~a~~~g~   96 (204)
                      |++|++|||||+|++++
T Consensus        78 ~~~G~~VNlE~~l~~~~   94 (96)
T 3a35_A           78 LEKGSDVNVETLNVSNE   94 (96)
T ss_dssp             CCTTCEEEEEECC----
T ss_pred             CCCCCEEEECCCCCCCC
T ss_conf             89899999799003767

Probab=99.96  E-value=1.8e-29  Score=192.62  Aligned_cols=89  Identities=19%  Similarity=0.197  Sum_probs=81.0

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECCCC-CCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             94533711899999987699359999817551-12667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNT-SKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~~-~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
                      ||||||+++|+|.++++.+++.++.++.|..+ +.+.+|+|||||||||||+++.     +++|.|+++|||+++|+|+.
T Consensus         3 MftGiI~~~g~i~~i~~~~~~~~~~i~~~~~~~~~i~~g~SIavnGvcLTV~~i~-----~~~f~v~i~~eTl~~T~l~~   77 (92)
T 3ddy_A            3 GLTGNIKGTALVAAIEENDAGFSVLIDIPKGLAENLTVKDDIGIDGISLPITDMS-----DSIITLNYSRDLLASTNIAS   77 (92)
T ss_dssp             CBCSCCCEEEEEEEEECCSSEEEEEEECCTTTCSCCCTTCEEEETTEEEECCEEE-----TTEEEEEEEGGGGGTSSGGG
T ss_pred             CEEEEEEEEEEEEEEEECCCEEEEEEECCHHHHCCEEECCEEEEEEEEEEEEEEC-----CCEEEEEECHHHHHHCCCCC
T ss_conf             5878944899999999769939999998979960187362387710799998441-----98999998057774162014


Q ss_pred             CCCCCCCCCCCCCHH
Q ss_conf             565663133543200
Q gi|254780347|r   80 WGIGTFINLERSVKL   94 (204)
Q Consensus        80 l~~G~~VNLE~a~~~   94 (204)
                      |++|++|||||++||
T Consensus        78 ~k~G~~VNlE~~~ky   92 (92)
T 3ddy_A           78 LAKDVKVNVEILNEW   92 (92)
T ss_dssp             CCTTCEEEEEECC--
T ss_pred             CCCCCEEEEEEEECC
T ss_conf             758998999998769

Probab=99.92  E-value=4.2e-25  Score=167.02  Aligned_cols=84  Identities=27%  Similarity=0.453  Sum_probs=63.8

Q ss_pred             EEEEEEEEEEECCCCEEEEEEECCC-CCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCC
Q ss_conf             1189999998769935999981755-112667724653331542365045556686799998656553201355565663
Q gi|254780347|r    7 TDIGKIIAMTPIAKGMRLRVMTSYN-TSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIASWGIGTF   85 (204)
Q Consensus         7 ~~~G~V~~i~~~~~~~~l~i~~~~~-~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~l~~G~~   85 (204)
                      |++|+|.++++.++++++.+++|.. ++.+.+|+|||||||||||+++.     +++|+|+++|||+++|||+.|++|++
T Consensus         1 e~~g~I~~i~~~~~~~~~~i~~~~~~~~~i~~~~SIavnGvsLTV~~~~-----~~~f~v~i~~eTl~~T~l~~~~~G~~   75 (85)
T 1i8d_A            1 QGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEIN-----GNHVSFDLMKETLRITNLGDLKVGDW   75 (85)
T ss_dssp             CEEEEEEEEEECSSEEEEEEECCGGGTTTCCTTCEEEETTEEEEEEEEE-----TTEEEEEEEHHHHHHSGGGGCCTTCE
T ss_pred             CCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCEEEEEEEEC-----CCEEEEECHHHHHHHHCCCCCCCCCE
T ss_conf             7089999999769966999982840004477888799787980468972-----65478863377764412453356974


Q ss_pred             CCCCCCCHHH
Q ss_conf             1335432000
Q gi|254780347|r   86 INLERSVKLG   95 (204)
Q Consensus        86 VNLE~a~~~g   95 (204)
                      |||||||++.
T Consensus        76 VNlE~~l~~~   85 (85)
T 1i8d_A           76 VNVERAAKFS   85 (85)
T ss_dssp             EEEEECCBTT
T ss_pred             EEECCCCCCC
T ss_conf             6004452588

Probab=99.91  E-value=2.3e-25  Score=168.60  Aligned_cols=85  Identities=27%  Similarity=0.384  Sum_probs=48.6

Q ss_pred             EEEEEEEEEEEECCCC-EEEEEEECCCCCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCCCCCCC
Q ss_conf             7118999999876993-599998175511266772465333154236504555668679999865655320135556566
Q gi|254780347|r    6 VTDIGKIIAMTPIAKG-MRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIASWGIGT   84 (204)
Q Consensus         6 V~~~G~V~~i~~~~~~-~~l~i~~~~~~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~l~~G~   84 (204)
                      |+++|+|.++++.++. .++.+.++..+..+.+|+|||||||||||+++.     +++|.|+++|||+++|||+.|++||
T Consensus         1 V~~~g~I~~i~~~~~~~~~~~~~~~~~~~~i~~g~SIavnGvcLTV~~~~-----~~~f~v~i~~eTl~~T~l~~~k~Gd   75 (87)
T 1kzl_A            1 VEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFD-----RYHFTVGIAPESLRLTNLGQCKAGD   75 (87)
T ss_dssp             CCEEEEEEEEEEETTTEEEEEEECGGGCTTCCTTCEEEETTEEEEEEEEC-----SSEEEEEECHHHHHHSSGGGCCTTC
T ss_pred             CCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCEEEEEEECC-----CCEEEEEEHHHHHHHHHHCCCCCCC
T ss_conf             07599999989768995899997674324477788799889998899768-----5479999838845465514466898


Q ss_pred             CCCCCCCCHHH
Q ss_conf             31335432000
Q gi|254780347|r   85 FINLERSVKLG   95 (204)
Q Consensus        85 ~VNLE~a~~~g   95 (204)
                      +|||||+|+++
T Consensus        76 ~VNlE~~l~~~   86 (87)
T 1kzl_A           76 PVNLERAVLSS   86 (87)
T ss_dssp             EEEEEECCCCS
T ss_pred             EECCCCCEECC
T ss_conf             78535552178

Probab=99.15  E-value=9.4e-11  Score=83.08  Aligned_cols=85  Identities=26%  Similarity=0.332  Sum_probs=66.8

Q ss_pred             CCCEEEEEE------------EEEEEEEECCCCEEEEEEE--CCCCCC-CCCCCEEEECCEEEEEEEECCCCCCCCEEEE
Q ss_conf             945337118------------9999998769935999981--755112-6677246533315423650455566867999
Q gi|254780347|r    1 MFTGIVTDI------------GKIIAMTPIAKGMRLRVMT--SYNTSK-MKLGCSIAHAGICLTVVRLSEEHSVDNWYEV   65 (204)
Q Consensus         1 MFtGIV~~~------------G~V~~i~~~~~~~~l~i~~--~~~~~~-l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~   65 (204)
                      ||||||+++            +.|.++-..++..++.++.  +..+.- +-.| =|.+||++|||-+++     ...|.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~   74 (128)
T 1i8d_A            1 MFTGIVDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKG-FIGIDGISLTVGEVT-----PTRFCV   74 (128)
T ss_dssp             CBCSCCSCCSSCCBCCCCCEEEEEEEEEEETTEEEEEEEESCGGGGGGCCTTC-EEEETTEEEECCSBC-----SSEEEE
T ss_pred             CCCEECCCCCCCCEEEEECCEEEEEEEEECCCCEEEEEEEHHHHHHHHHEECC-EEEEEEEEEEEEEEC-----CCEEEE
T ss_conf             95851355078627898672579999996489449999802556654303412-699810799999874-----988999


Q ss_pred             EEEHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             98656553201355565663133543
Q gi|254780347|r   66 EVWAETNRITNIASWGIGTFINLERS   91 (204)
Q Consensus        66 ~~~~ETl~~T~l~~l~~G~~VNLE~a   91 (204)
                      .++||||.||+++..+.|.+||+|.-
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~i~  100 (128)
T 1i8d_A           75 HLIPETLERTTLGKKKLGARVNIEID  100 (128)
T ss_dssp             EECHHHHHHSSGGGCCTTCEEEEEEC
T ss_pred             EECHHHHHHCCCCCCCCCCEEEEEEE
T ss_conf             98188675472013768998999384

Probab=98.43  E-value=2.4e-06  Score=57.25  Aligned_cols=85  Identities=20%  Similarity=0.307  Sum_probs=70.7

Q ss_pred             CCCEE----------EEEEEEEEEEEECCCCEEEEEEECCC--CCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEE
Q ss_conf             94533----------71189999998769935999981755--1126677246533315423650455566867999986
Q gi|254780347|r    1 MFTGI----------VTDIGKIIAMTPIAKGMRLRVMTSYN--TSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVW   68 (204)
Q Consensus         1 MFtGI----------V~~~G~V~~i~~~~~~~~l~i~~~~~--~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~   68 (204)
                      ||||+          |...+.|..-++..+.+|+.++.+..  ++-+-.-+-||.||.+||++.++     ++.|+.-.+
T Consensus         1 ~~~~~r~GGHfvqGHVd~t~eIVekk~Dg~sirf~vk~~dp~~l~y~i~~~~~~~~~~~~~~~~~d-----~~~~~~~~~   75 (99)
T 1kzl_A            1 MFTGLRMGGHFVQGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHVD-----DSTFSIMMI   75 (99)
T ss_dssp             CBCSCCSSSCCBCSCCCEEEEEEEEEEETTEEEEEEEESSGGGGGGCCTTCEEEETTEEEEEEEEC-----SSCEEEEEC
T ss_pred             CCCCCEECCEEEEEEEEEEEEEEEEEECCCCEEEEEEEEEHHHHCCEEECCEEEEEEEEEEEEEEC-----CCEEEEEEE
T ss_conf             988318677467998106899999984499637999951012332332302089850489998662-----998999997


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             5655320135556566313354
Q gi|254780347|r   69 AETNRITNIASWGIGTFINLER   90 (204)
Q Consensus        69 ~ETl~~T~l~~l~~G~~VNLE~   90 (204)
                      .-|-++--..-..+||.||+|.
T Consensus        76 ~~~qsk~i~a~~NV~~~~~~~v   97 (99)
T 1kzl_A           76 SYTQSKVIMAKKNVGDLVNVEV   97 (99)
T ss_dssp             HHHHTTSGGGGCCTTCEEEEEE
T ss_pred             HHHHHHCHHCCCCCCCEEEEEE
T ss_conf             7886544100377899999845

Probab=99.97  E-value=5.7e-31  Score=201.36  Aligned_cols=94  Identities=16%  Similarity=0.222  Sum_probs=83.6

Q ss_pred             EEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHHHCCCCC
Q ss_conf             24540100110111002331379875134211210023571998234578774168549999844433013300248996
Q gi|254780347|r  102 LVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVGD  181 (204)
Q Consensus       102 ~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~~~k~Gd  181 (204)
                      ++|||||++|+|.++++.++++.++|++|+.+.+|+..|||||+|||||||+++.+++|++++||||+++|||+.|++||
T Consensus         3 MftGiI~~~g~I~~i~~~~~~~~~~i~~~~~~~~~l~~g~SIavdGvcLTV~~~~~~~f~v~l~~eTl~~T~l~~~~~G~   82 (96)
T 3a35_A            3 ALTGNIKGVATVDNITEEEDRLKVYIKIPKDLIENILSEDHIGINGVSHSIEEISDDIIFINYPKNLSITTNLGTLEKGS   82 (96)
T ss_dssp             CBCSCCCEEEEEEEEEEETTEEEEEEECCTTSCSCCCTTSEEEETTEEEECCEEETTEEEEEEETTHHHHSGGGGCCTTC
T ss_pred             CEEEEECCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCEEEECCCCEEEEEEECCEEEEEECCHHHHHCCCCCCCCCC
T ss_conf             33567402304543101254215778605410001201573896256238876608899999570567511156689899


Q ss_pred             EEEEEHHHHHHHHH
Q ss_conf             74697135889999
Q gi|254780347|r  182 LINIEVDSMMRYIA  195 (204)
Q Consensus       182 ~VNiE~D~l~kyv~  195 (204)
                      +||||.|+++||+|
T Consensus        83 ~VNlE~~l~~~~~e   96 (96)
T 3a35_A           83 DVNVETLNVSNEWD   96 (96)
T ss_dssp             EEEEEECC------
T ss_pred             EEEECCCCCCCCCC
T ss_conf             99979900376789

Probab=99.95  E-value=6.7e-28  Score=183.38  Aligned_cols=107  Identities=32%  Similarity=0.422  Sum_probs=101.7

Q ss_pred             HHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCC-CCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCC
Q ss_conf             00004764245401001101110023313798751342-11210023571998234578774168549999844433013
Q gi|254780347|r   94 LGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPH-NLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEET  172 (204)
Q Consensus        94 ~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~-~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T  172 (204)
                      .-|++|||+++||+-.+|++.++-..++++.+||++.. .+++|+.+||+|.+||+||||.++....|+|++||||+++|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (128)
T 1i8d_A            5 IVDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERT   84 (128)
T ss_dssp             CCSCCSSCCBCCCCCEEEEEEEEEEETTEEEEEEEESCGGGGGGCCTTCEEEETTEEEECCSBCSSEEEEEECHHHHHHS
T ss_pred             ECCCCCCCCEEEEECCEEEEEEEEECCCCEEEEEEEHHHHHHHHHEECCEEEEEEEEEEEEEECCCEEEEEECHHHHHHC
T ss_conf             13550786278986725799999964894499998025566543034126998107999998749889999818867547


Q ss_pred             CHHHCCCCCEEEEEHHHHHHHHHHHHCC
Q ss_conf             3002489967469713588999998602
Q gi|254780347|r  173 TWKMHKVGDLINIEVDSMMRYIARLYAL  200 (204)
Q Consensus       173 ~l~~~k~Gd~VNiE~D~l~kyv~r~~~~  200 (204)
                      +|+.+|.|.+||+|+|.++|||+|+++.
T Consensus        85 ~~~~~~~~~~~~~~i~PLTKYIEKYLER  112 (128)
T 1i8d_A           85 TLGKKKLGARVNIEIDPQTQAVVDTVER  112 (128)
T ss_dssp             SGGGCCTTCEEEEEECHHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEEEEHHHHHHHHHHHH
T ss_conf             2013768998999384088999999999

Probab=99.94  E-value=1.3e-27  Score=181.61  Aligned_cols=86  Identities=17%  Similarity=0.310  Sum_probs=84.8

Q ss_pred             EEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHHHCCCCC
Q ss_conf             24540100110111002331379875134211210023571998234578774168549999844433013300248996
Q gi|254780347|r  102 LVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVGD  181 (204)
Q Consensus       102 ~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~~~k~Gd  181 (204)
                      +++||||++|+|.++++.+++..++|++|+.+.+|++.|||||+|||||||+++.+++|++++||||+++|+|+.+++||
T Consensus         3 MftGiI~~~g~i~~i~~~~~~~~~~i~~~~~~~~~i~~g~SIavnGvcLTV~~i~~~~f~v~i~~eTl~~T~l~~~k~G~   82 (92)
T 3ddy_A            3 GLTGNIKGTALVAAIEENDAGFSVLIDIPKGLAENLTVKDDIGIDGISLPITDMSDSIITLNYSRDLLASTNIASLAKDV   82 (92)
T ss_dssp             CBCSCCCEEEEEEEEECCSSEEEEEEECCTTTCSCCCTTCEEEETTEEEECCEEETTEEEEEEEGGGGGTSSGGGCCTTC
T ss_pred             CEEEEEEEEEEEEEEEECCCEEEEEEECCHHHHCCEEECCEEEEEEEEEEEEEECCCEEEEEECHHHHHHCCCCCCCCCC
T ss_conf             58789448999999997699399999989799601873623877107999984419899999805777416201475899


Q ss_pred             EEEEEH
Q ss_conf             746971
Q gi|254780347|r  182 LINIEV  187 (204)
Q Consensus       182 ~VNiE~  187 (204)
                      +||||.
T Consensus        83 ~VNlE~   88 (92)
T 3ddy_A           83 KVNVEI   88 (92)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
T ss_conf             899999

Probab=99.93  E-value=6.3e-27  Score=177.70  Aligned_cols=89  Identities=22%  Similarity=0.327  Sum_probs=85.5

Q ss_pred             EEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHHHCCCCC
Q ss_conf             24540100110111002331379875134211210023571998234578774168549999844433013300248996
Q gi|254780347|r  102 LVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVGD  181 (204)
Q Consensus       102 ~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~~~k~Gd  181 (204)
                      +++||||++|+|.++++.++++.++|++|+.+.+|+..|||||+|||||||+++.+++|.+. ||||+++|+|+.+++||
T Consensus         1 MFtG~I~~~g~V~~i~~~~~~~~~~i~~~~~~~~~~~~g~SIavdGvsLTV~~~~~~~f~~~-ipeTl~~T~l~~~~~G~   79 (94)
T 3a35_A            1 MFKGIVQGAGIIKKISKNDDTQRHGITFPKDILESVEKGTVMLVNGCSLTVVRISGDVVYFD-IDQAINTTTFRELEVGN   79 (94)
T ss_dssp             CBCSCCCEEEEEEEEEECSSCEEEEEECCHHHHHTCCTTCEEEETTEEEEEEEEETTEEEEE-ESTTTTTSSGGGCCTTC
T ss_pred             CCCEECCEEEEEEEEEECCCCEEEEEEECHHHHHHCCCCCEEEECCEEEEEEECCCCHHHHH-HHHHHHHHHCCCCCCCC
T ss_conf             96920280999999998899289999977166644557873897778648984363202134-56666642023102366


Q ss_pred             EEEEEHHHHH
Q ss_conf             7469713588
Q gi|254780347|r  182 LINIEVDSMM  191 (204)
Q Consensus       182 ~VNiE~D~l~  191 (204)
                      +||||.|+.+
T Consensus        80 ~VNlE~~l~~   89 (94)
T 3a35_A           80 KVNLEVRPEF   89 (94)
T ss_dssp             EEEEECCCSS
T ss_pred             CCCCCCCCCC
T ss_conf             3351343233

Probab=99.93  E-value=3.1e-26  Score=173.64  Aligned_cols=89  Identities=24%  Similarity=0.302  Sum_probs=85.7

Q ss_pred             EEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHHHCCCCC
Q ss_conf             24540100110111002331379875134211210023571998234578774168549999844433013300248996
Q gi|254780347|r  102 LVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVGD  181 (204)
Q Consensus       102 ~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~~~k~Gd  181 (204)
                      +.+||||++|+|.++++.++++.++|++|+.+.+|+..|||||+|||||||+++.+++|.++ ||||+++|+|+.+++||
T Consensus         1 MFtG~I~~~g~I~~i~~~~~~~~~~i~~~~~~~~~i~~~~SIavnGvcLTV~~v~~~~f~v~-ipeTl~~T~l~~~~~G~   79 (94)
T 3ddy_A            1 MFRGIVQGRGVIRSISKSEDSQRHGIAFPEGMFQLVDVDTVMLVNGCSNTVVRILGDMVYFD-IDQALGTTTFDGLKEGD   79 (94)
T ss_dssp             CBCSCCCEEEEEEEEEECSSCEEEEEECCTTTGGGCCTTCEEEETTEEEEEEEEETTEEEEE-ECTTTTTSSGGGCCTTC
T ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCEEEEEEEECCCEEEEE-CHHHHHHCCHHHCCCCC
T ss_conf             98824038999999997699389999917764342467878996879999999679879998-16973020060174799


Q ss_pred             EEEEEHHHHH
Q ss_conf             7469713588
Q gi|254780347|r  182 LINIEVDSMM  191 (204)
Q Consensus       182 ~VNiE~D~l~  191 (204)
                      +||||.|+.+
T Consensus        80 ~VNlE~~l~~   89 (94)
T 3ddy_A           80 QVNLEIHPKF   89 (94)
T ss_dssp             EEEEECCC--
T ss_pred             EEEEECCCCC
T ss_conf             9854206668

Probab=99.91  E-value=2e-24  Score=163.10  Aligned_cols=86  Identities=17%  Similarity=0.156  Sum_probs=81.8

Q ss_pred             CCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHHHCCCCCEEEEE
Q ss_conf             10011011100233137987513421121002357199823457877416854999984443301330024899674697
Q gi|254780347|r  107 IDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVGDLINIE  186 (204)
Q Consensus       107 Vd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~~~k~Gd~VNiE  186 (204)
                      ||++|+|.++++.+++....+..|+.+.+|+..|||||+|||||||+++.+++|.+++||||+++|||+.|++||+||||
T Consensus         1 V~~~g~I~~i~~~~~~~~~~~~~~~~~~~~i~~g~SIavnGvcLTV~~~~~~~f~v~i~~eTl~~T~l~~~k~Gd~VNlE   80 (87)
T 1kzl_A            1 VEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFDRYHFTVGIAPESLRLTNLGQCKAGDPVNLE   80 (87)
T ss_dssp             CCEEEEEEEEEEETTTEEEEEEECGGGCTTCCTTCEEEETTEEEEEEEECSSEEEEEECHHHHHHSSGGGCCTTCEEEEE
T ss_pred             CCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCEEEEEEECCCCEEEEEEHHHHHHHHHHCCCCCCCEECCC
T ss_conf             07599999989768995899997674324477788799889998899768547999983884546551446689878535


Q ss_pred             HHHHHH
Q ss_conf             135889
Q gi|254780347|r  187 VDSMMR  192 (204)
Q Consensus       187 ~D~l~k  192 (204)
                      .|+++|
T Consensus        81 ~~l~~~   86 (87)
T 1kzl_A           81 RAVLSS   86 (87)
T ss_dssp             ECCCCS
T ss_pred             CCEECC
T ss_conf             552178

Probab=99.91  E-value=8.2e-25  Score=165.32  Aligned_cols=83  Identities=27%  Similarity=0.326  Sum_probs=80.5

Q ss_pred             CCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHHHCCCCCEEEEEH
Q ss_conf             00110111002331379875134211210023571998234578774168549999844433013300248996746971
Q gi|254780347|r  108 DGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVGDLINIEV  187 (204)
Q Consensus       108 d~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~~~k~Gd~VNiE~  187 (204)
                      +++|+|.++++.++++.++|++|+.+.+|+..|||||+|||||||+++.+++|.+++||||+++|||+.+++||+||||.
T Consensus         1 e~~g~I~~i~~~~~~~~~~i~~~~~~~~~i~~~~SIavnGvsLTV~~~~~~~f~v~i~~eTl~~T~l~~~~~G~~VNlE~   80 (85)
T 1i8d_A            1 QGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVER   80 (85)
T ss_dssp             CEEEEEEEEEECSSEEEEEEECCGGGTTTCCTTCEEEETTEEEEEEEEETTEEEEEEEHHHHHHSGGGGCCTTCEEEEEE
T ss_pred             CCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCEEEEEEEECCCEEEEECHHHHHHHHCCCCCCCCCEEEECC
T ss_conf             70899999997699669999828400044778887997879804689726547886337776441245335697460044


Q ss_pred             HHH
Q ss_conf             358
Q gi|254780347|r  188 DSM  190 (204)
Q Consensus       188 D~l  190 (204)
                      ++.
T Consensus        81 ~l~   83 (85)
T 1i8d_A           81 AAK   83 (85)
T ss_dssp             CCB
T ss_pred             CCC
T ss_conf             525

Probab=99.85  E-value=1.5e-21  Score=146.29  Aligned_cols=97  Identities=32%  Similarity=0.517  Sum_probs=91.3

Q ss_pred             HHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCC-CCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCC
Q ss_conf             000004764245401001101110023313798751342-1121002357199823457877416854999984443301
Q gi|254780347|r   93 KLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPH-NLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEE  171 (204)
Q Consensus        93 ~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~-~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~  171 (204)
                      --|-|+|||||||||||+++|++.++.+++.++.++.|+ .+.+|+++||+||+||.|||+..+.+..|++..|.+|.++
T Consensus         2 ~~~~r~GGHfvqGHVd~t~eIVekk~Dg~sirf~vk~~dp~~l~y~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~qsk   81 (99)
T 1kzl_A            2 FTGLRMGGHFVQGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHVDDSTFSIMMISYTQSK   81 (99)
T ss_dssp             BCSCCSSSCCBCSCCCEEEEEEEEEEETTEEEEEEEESSGGGGGGCCTTCEEEETTEEEEEEEECSSCEEEEECHHHHTT
T ss_pred             CCCCEECCEEEEEEEEEEEEEEEEEECCCCEEEEEEEEEHHHHCCEEECCEEEEEEEEEEEEEECCCEEEEEEEHHHHHH
T ss_conf             88318677467998106899999984499637999951012332332302089850489998662998999997788654


Q ss_pred             CCHHHCCCCCEEEEEHHH
Q ss_conf             330024899674697135
Q gi|254780347|r  172 TTWKMHKVGDLINIEVDS  189 (204)
Q Consensus       172 T~l~~~k~Gd~VNiE~D~  189 (204)
                      -..+...+||.||+|.|.
T Consensus        82 ~i~a~~NV~~~~~~~vdQ   99 (99)
T 1kzl_A           82 VIMAKKNVGDLVNVEVDQ   99 (99)
T ss_dssp             SGGGGCCTTCEEEEEECT
T ss_pred             CHHCCCCCCCEEEEEEHH
T ss_conf             410037789999984503