254780347
riboflavin synthase subunit alpha
GeneID in NCBI database: | 8209332 | Locus tag: | CLIBASIA_01160 |
Protein GI in NCBI database: | 254780347 | Protein Accession: | YP_003064760.1 |
Gene range: | -(242218, 242832) | Protein Length: | 204aa |
Gene description: | riboflavin synthase subunit alpha | ||
COG prediction: | [H] Riboflavin synthase alpha chain | ||
KEGG prediction: | ribE; riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase alpha chain [EC:2.5.1.9] | ||
SEED prediction: | Riboflavin synthase alpha chain (EC 2.5.1.9) | ||
Pathway involved in KEGG: | Riboflavin metabolism [PATH:las00740] | ||
Subsystem involved in SEED: | Riboflavin, FMN and FAD metabolism | ||
sequence | sequence profile |
Prediction of Local Sequence Properties
Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
No hits with e-value below 0.05
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
Identity | Alignment graph | Length | Definition | Round | E-value |
Target | 204 | riboflavin synthase subunit alpha [Candidatus Liberibac | |||
315122229 | 204 | riboflavin synthase subunit alpha [Candidatus Liberibac | 1 | 3e-96 | |
15964964 | 206 | riboflavin synthase subunit alpha [Sinorhizobium melilo | 1 | 1e-59 | |
307317769 | 206 | riboflavin synthase, alpha subunit [Sinorhizobium melil | 1 | 1e-59 | |
150396043 | 206 | riboflavin synthase subunit alpha [Sinorhizobium medica | 1 | 2e-59 | |
116251388 | 204 | riboflavin synthase subunit alpha [Rhizobium leguminosa | 1 | 8e-59 | |
190891195 | 203 | riboflavin synthase, alpha chain [Rhizobium etli CIAT 6 | 1 | 1e-58 | |
209548783 | 203 | riboflavin synthase subunit alpha [Rhizobium leguminosa | 1 | 2e-58 | |
327190086 | 203 | riboflavin synthase protein, alpha chain [Rhizobium etl | 1 | 2e-58 | |
241204004 | 203 | riboflavin synthase subunit alpha [Rhizobium leguminosa | 1 | 1e-57 | |
325292543 | 203 | Riboflavin synthase alpha chain [Agrobacterium sp. H13- | 1 | 1e-57 |
>gi|315122229|ref|YP_004062718.1| riboflavin synthase subunit alpha [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 204 | Back alignment and organism information |
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Score = 354 bits (909), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 165/200 (82%), Positives = 187/200 (93%) Query: 1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVD 60 MFTGIVTDIG+IIA+ PIAKG+RLR+MTSY+TS M++GCSIAHAGICLTVV+LS+E SV+ Sbjct: 1 MFTGIVTDIGQIIAIMPIAKGLRLRLMTSYDTSTMRVGCSIAHAGICLTVVQLSDESSVN 60 Query: 61 NWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIG 120 NWYEVE+W ETNR+TN+ +W IGTF+NLERS+KLGD LDGHLVSGH+DGTVEILF+DF G Sbjct: 61 NWYEVEIWEETNRLTNVVAWEIGTFVNLERSMKLGDELDGHLVSGHVDGTVEILFMDFFG 120 Query: 121 DSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKVG 180 DS+YCRLSLPHNLE+FIAVKGSVCLNGVSLTVNLVG NFFDVLLIRHTIE+TTW MHK G Sbjct: 121 DSVYCRLSLPHNLEKFIAVKGSVCLNGVSLTVNLVGDNFFDVLLIRHTIEQTTWSMHKTG 180 Query: 181 DLINIEVDSMMRYIARLYAL 200 DLINIEVDSMMRYI+RL A Sbjct: 181 DLINIEVDSMMRYISRLCAF 200 |
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|15964964|ref|NP_385317.1| riboflavin synthase subunit alpha [Sinorhizobium meliloti 1021] Length = 206 | Back alignment and organism information |
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>gi|307317769|ref|ZP_07597207.1| riboflavin synthase, alpha subunit [Sinorhizobium meliloti AK83] Length = 206 | Back alignment and organism information |
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>gi|150396043|ref|YP_001326510.1| riboflavin synthase subunit alpha [Sinorhizobium medicae WSM419] Length = 206 | Back alignment and organism information |
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>gi|116251388|ref|YP_767226.1| riboflavin synthase subunit alpha [Rhizobium leguminosarum bv. viciae 3841] Length = 204 | Back alignment and organism information |
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>gi|190891195|ref|YP_001977737.1| riboflavin synthase, alpha chain [Rhizobium etli CIAT 652] Length = 203 | Back alignment and organism information |
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>gi|209548783|ref|YP_002280700.1| riboflavin synthase subunit alpha [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 203 | Back alignment and organism information |
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>gi|327190086|gb|EGE57201.1| riboflavin synthase protein, alpha chain [Rhizobium etli CNPAF512] Length = 203 | Back alignment and organism information |
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>gi|241204004|ref|YP_002975100.1| riboflavin synthase subunit alpha [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 203 | Back alignment and organism information |
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>gi|325292543|ref|YP_004278407.1| Riboflavin synthase alpha chain [Agrobacterium sp. H13-3] Length = 203 | Back alignment and organism information |
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Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
Identity | Alignment graph | Length | Definition | E-value |
Target | 204 | riboflavin synthase subunit alpha [Candidatus Liberibac | ||
PRK09289 | 194 | PRK09289, PRK09289, riboflavin synthase subunit alpha; | 1e-68 | |
PRK13020 | 206 | PRK13020, PRK13020, riboflavin synthase subunit alpha; | 5e-39 | |
TIGR00187 | 200 | TIGR00187, ribE, riboflavin synthase, alpha subunit | 5e-38 | |
PLN02741 | 194 | PLN02741, PLN02741, riboflavin synthase | 3e-32 | |
KOG3310 | 210 | KOG3310, KOG3310, KOG3310, Riboflavin synthase alpha ch | 5e-27 | |
COG0307 | 204 | COG0307, RibC, Riboflavin synthase alpha chain [Coenzym | 5e-53 | |
pfam00677 | 86 | pfam00677, Lum_binding, Lumazine binding domain | 1e-10 | |
pfam00677 | 86 | pfam00677, Lum_binding, Lumazine binding domain | 2e-05 |
>gnl|CDD|181760 PRK09289, PRK09289, riboflavin synthase subunit alpha; Provisional | Back alignment and domain information |
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>gnl|CDD|183846 PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional | Back alignment and domain information |
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>gnl|CDD|161753 TIGR00187, ribE, riboflavin synthase, alpha subunit | Back alignment and domain information |
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>gnl|CDD|178342 PLN02741, PLN02741, riboflavin synthase | Back alignment and domain information |
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>gnl|CDD|38520 KOG3310, KOG3310, KOG3310, Riboflavin synthase alpha chain [Coenzyme transport and metabolism] | Back alignment and domain information |
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>gnl|CDD|30655 COG0307, RibC, Riboflavin synthase alpha chain [Coenzyme metabolism] | Back alignment and domain information |
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>gnl|CDD|144321 pfam00677, Lum_binding, Lumazine binding domain | Back alignment and domain information |
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>gnl|CDD|144321 pfam00677, Lum_binding, Lumazine binding domain | Back alignment and domain information |
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Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
Identity | Alignment graph | Length | Definition | Probability |
Target | 204 | riboflavin synthase subunit alpha [Candidatus Liberibac | ||
PRK09289 | 198 | riboflavin synthase subunit alpha; Provisional | 100.0 | |
PRK13020 | 207 | riboflavin synthase subunit alpha; Provisional | 100.0 | |
COG0307 | 204 | RibC Riboflavin synthase alpha chain [Coenzyme metaboli | 100.0 | |
TIGR00187 | 225 | ribE riboflavin synthase, alpha subunit; InterPro: IPR0 | 100.0 | |
KOG3310 | 210 | consensus | 100.0 | |
pfam00677 | 86 | Lum_binding Lumazine binding domain. This domain binds | 99.94 | |
PRK13020 | 207 | riboflavin synthase subunit alpha; Provisional | 99.82 | |
PRK09289 | 198 | riboflavin synthase subunit alpha; Provisional | 99.81 | |
TIGR00187 | 225 | ribE riboflavin synthase, alpha subunit; InterPro: IPR0 | 99.81 | |
KOG3310 | 210 | consensus | 99.51 | |
pfam00677 | 86 | Lum_binding Lumazine binding domain. This domain binds | 99.89 | |
COG0307 | 204 | RibC Riboflavin synthase alpha chain [Coenzyme metaboli | 99.76 |
>PRK09289 riboflavin synthase subunit alpha; Provisional | Back alignment and domain information |
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>PRK13020 riboflavin synthase subunit alpha; Provisional | Back alignment and domain information |
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>COG0307 RibC Riboflavin synthase alpha chain [Coenzyme metabolism] | Back alignment and domain information |
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>TIGR00187 ribE riboflavin synthase, alpha subunit; InterPro: IPR001783 The following proteins have been shown , to be structurally and evolutionary related: Riboflavin synthase alpha chain (2 | Back alignment and domain information |
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>KOG3310 consensus | Back alignment and domain information |
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>pfam00677 Lum_binding Lumazine binding domain | Back alignment and domain information |
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>PRK13020 riboflavin synthase subunit alpha; Provisional | Back alignment and domain information |
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>PRK09289 riboflavin synthase subunit alpha; Provisional | Back alignment and domain information |
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>TIGR00187 ribE riboflavin synthase, alpha subunit; InterPro: IPR001783 The following proteins have been shown , to be structurally and evolutionary related: Riboflavin synthase alpha chain (2 | Back alignment and domain information |
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>KOG3310 consensus | Back alignment and domain information |
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>pfam00677 Lum_binding Lumazine binding domain | Back alignment and domain information |
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>COG0307 RibC Riboflavin synthase alpha chain [Coenzyme metabolism] | Back alignment and domain information |
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Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch
Homologous Structures Detected by PSI-BLAST against Nonredundant Database
Identity | Alignment graph | Length | Definition | E-value |
Target | 204 | riboflavin synthase subunit alpha [Candidatus Liberibac | ||
1i8d_A | 213 | Crystal Structure Of Riboflavin Synthase Length = 2 | 7e-38 | |
1kzl_A | 208 | Riboflavin Synthase From S.Pombe Bound To Carboxyet | 2e-33 | |
3a35_A | 190 | Crystal Structure Of Lump Complexed With Riboflavin | 2e-17 | |
3ddy_A | 186 | Structure Of Lumazine Protein, An Optical Transpond | 3e-14 | |
1hze_A | 97 | Solution Structure Of The N-Terminal Domain Of Ribo | 7e-14 | |
1hze_A | 97 | Solution Structure Of The N-Terminal Domain Of Ribo | 2e-07 |
gi|15988274|pdb|1I8D|A Chain A, Crystal Structure Of Riboflavin Synthase Length = 213 | Back alignment and structure |
Score = 161 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 11/209 (5%) Query: 1 MFTGIVTDIGKIIAMTPIAKGMRLRVM-TSYNTSKMKLGCSIAHAGICLTVVRLSEEHSV 59 MFTGIV K++++ V + ++ G S+AH G CLTV ++ Sbjct: 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEIN----- 55 Query: 60 DNWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFI 119 N ++ ET RITN+ +G ++N+ER+ K D + GHL+SGHI T E+ + Sbjct: 56 GNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTS 115 Query: 120 GDSM-YCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHK 178 ++ L ++I KG + ++G+SLTV V F V LI T+E TT K Sbjct: 116 ENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKK 175 Query: 179 VGDLINIEVDSMMRY----IARLYALNTS 203 +G +NIE+D + + R+ A + Sbjct: 176 LGARVNIEIDPQTQAVVDTVERVLAAREN 204 |
gi|24987485|pdb|1KZL|A Chain A, Riboflavin Synthase From S.Pombe Bound To Carboxyethyllumazine Length = 208 | Back alignment and structure |
>gi|266618508|pdb|3A35|A Chain A, Crystal Structure Of Lump Complexed With Riboflavin Length = 190 | Back alignment and structure |
>gi|193506833|pdb|3DDY|A Chain A, Structure Of Lumazine Protein, An Optical Transponder Of Luminescent Bacteria Length = 186 | Back alignment and structure |
>gi|15826467|pdb|1HZE|A Chain A, Solution Structure Of The N-Terminal Domain Of Riboflavin Synthase From E. Coli Length = 97 | Back alignment and structure |
>gi|15826467|pdb|1HZE|A Chain A, Solution Structure Of The N-Terminal Domain Of Riboflavin Synthase From E. Coli Length = 97 | Back alignment and structure |
Homologous Structures in PDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 204 | riboflavin synthase subunit alpha [Candidatus Liberibac | ||
3ddy_A | 186 | Lumazine protein, LUMP; luminescent bacteria, riboflavi | 7e-49 | |
1kzl_A | 208 | Riboflavin synthase; biosynthesis of riboflavin, ligand | 8e-45 | |
1i8d_A | 213 | Riboflavin synthase; riboflavin biosynthesis, antimicro | 9e-44 | |
3a35_A | 190 | Lumazine protein, LUMP; luminous bacteria, homologue of | 4e-28 |
>3ddy_A Lumazine protein, LUMP; luminescent bacteria, riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi} Length = 186 | Back alignment and structure |
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Score = 188 bits (479), Expect = 7e-49 Identities = 35/188 (18%), Positives = 73/188 (38%), Gaps = 7/188 (3%) Query: 1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSK-MKLGCSIAHAGICLTVVRLSEEHSV 59 MF GIV G I +++ R + + + + + G TVVR+ Sbjct: 1 MFRGIVQGRGVIRSISKSEDSQRHGIAFPEGMFQLVDVDTVMLVNGCSNTVVRIL----- 55 Query: 60 DNWYEVEVWAETNRITNIASWGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFI 119 + ++ + T G +NLE K G+ + ++G+I GT + ++ Sbjct: 56 GDMVYFDI-DQALGTTTFDGLKEGDQVNLEIHPKFGEVVGRGGLTGNIKGTALVAAIEEN 114 Query: 120 GDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWKMHKV 179 + +P L + + VK + ++G+SL + + + + R + T Sbjct: 115 DAGFSVLIDIPKGLAENLTVKDDIGIDGISLPITDMSDSIITLNYSRDLLASTNIASLAK 174 Query: 180 GDLINIEV 187 +N+E+ Sbjct: 175 DVKVNVEI 182 |
>1kzl_A Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} SCOP: b.43.4.3 b.43.4.3 Length = 208 | Back alignment and structure |
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>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A* Length = 213 | Back alignment and structure |
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>3a35_A Lumazine protein, LUMP; luminous bacteria, homologue of riboflavin synthase, luminescent protein; HET: RBF; 1.42A {Photobacterium kishitanii} PDB: 3a3b_B* 3a3g_A* Length = 190 | Back alignment and structure |
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Homologous Structures in PDB70 Database Detected by HHsearch
Original result of HHsearch against PDB70 database
Identity | Alignment graph | Length | Definition | Probability |
Target | 204 | riboflavin synthase subunit alpha [Candidatus Liberibac | ||
1kzl_A | 208 | Riboflavin synthase; biosynthesis of riboflavin, ligand | 100.0 | |
1i8d_A | 213 | Riboflavin synthase; riboflavin biosynthesis, antimicro | 100.0 | |
3a35_A | 190 | Lumazine protein, LUMP; luminous bacteria, homologue of | 100.0 | |
3ddy_A | 186 | Lumazine protein, LUMP; luminescent bacteria, riboflavi | 100.0 | |
1i8d_A | 213 | Riboflavin synthase; riboflavin biosynthesis, antimicro | 99.83 | |
3ddy_A | 186 | Lumazine protein, LUMP; luminescent bacteria, riboflavi | 99.82 | |
3a35_A | 190 | Lumazine protein, LUMP; luminous bacteria, homologue of | 99.8 | |
1kzl_A | 208 | Riboflavin synthase; biosynthesis of riboflavin, ligand | 99.8 |
>1kzl_A Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} SCOP: b.43.4.3 b.43.4.3 | Back alignment and structure |
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Probab=100.00 E-value=0 Score=503.55 Aligned_cols=198 Identities=30% Similarity=0.497 Sum_probs=188.6 Q ss_pred CCCEEEEEEEEEEEEEEC-CCCEEEEEEECCCCCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC Q ss_conf 945337118999999876-9935999981755112667724653331542365045556686799998656553201355 Q gi|254780347|r 1 MFTGIVTDIGKIIAMTPI-AKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS 79 (204) Q Consensus 1 MFtGIV~~~G~V~~i~~~-~~~~~l~i~~~~~~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~ 79 (204) |||||||++|+|.++++. ++++++.+.++..++++++|||||||||||||++++ +++|+|++++||+++|||+. T Consensus 1 MFTGII~~~G~V~~i~~~~~~~~~l~i~~~~~~~~l~iG~SIavnGvCLTV~~~~-----~~~~~~dv~~ETl~~T~l~~ 75 (208) T 1kzl_A 1 MFTGLVEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFD-----RYHFTVGIAPESLRLTNLGQ 75 (208) T ss_dssp CBCSCCCEEEEEEEEEEETTTEEEEEEECGGGCTTCCTTCEEEETTEEEEEEEEC-----SSEEEEEECHHHHHHSSGGG T ss_pred CCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCEEEEEEECC-----CCEEEEEEHHHHHHHHHHCC T ss_conf 9880107699999989768995899997574224477788699889998899768-----87799998588555665255 Q ss_pred CCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCC-CCCCEECCCCEEEEEEEEEEEEEECCC Q ss_conf 5656631335432000004764245401001101110023313798751342-112100235719982345787741685 Q gi|254780347|r 80 WGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPH-NLEQFIAVKGSVCLNGVSLTVNLVGKN 158 (204) Q Consensus 80 l~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~-~~~~~l~~KgsI~idGvSLTV~~~~~~ 158 (204) |++|++|||||||++|||+|||+||||||++|+++++++.++++.+++..|+ .+.+|+++|||||+|||||||+++.++ T Consensus 76 l~~G~~VNLErsl~~gd~lgGH~V~GHVD~~~~i~~i~~~~~~~~~~~~~~~~~~~~yiv~KGsIaidGvSLTV~~v~~~ 155 (208) T 1kzl_A 76 CKAGDPVNLERAVLSSTRMGGHFVQGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHVDDS 155 (208) T ss_dssp CCTTCEEEEEECCCCSCCSSSCCBCSCCCEEEEEEEEEEETTEEEEEEEESSGGGGGGCCTTCEEEETTEEEEEEEECSS T ss_pred CCCCCEECCCCCEECCCEECCEEEEEECCEEEEEEEEEECCCCEEEEEEEEEHHHHCCEEECCEEEEEEEEEEEEEECCC T ss_conf 77898883156531786867844788740899999999769963799995101122124650109985048999867299 Q ss_pred EEEEEEEHHHHCCCCHHHCCCCCEEEEEHHHHHHHHHHHHCCCCC Q ss_conf 499998444330133002489967469713588999998602335 Q gi|254780347|r 159 FFDVLLIRHTIEETTWKMHKVGDLINIEVDSMMRYIARLYALNTS 203 (204) Q Consensus 159 ~f~v~lIp~Tl~~T~l~~~k~Gd~VNiE~D~l~kyv~r~~~~~~~ 203 (204) +|+|+||||||++|||+++++||+||||+|++|||++|+++.+.+ T Consensus 156 ~f~v~lIP~Tl~~T~l~~~~~Gd~VNiE~D~lakYi~~~l~~~~~ 200 (208) T 1kzl_A 156 TFSIMMISYTQSKVIMAKKNVGDLVNVEVDQIGKYTEKLVEAHIA 200 (208) T ss_dssp CEEEEECHHHHTTSGGGGCCTTCEEEEEECTHHHHHHHHHHHHTT T ss_pred EEEEEEEHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH T ss_conf 899999778865451114878999998641499999999877543 |
>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A* | Back alignment and structure |
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>3a35_A Lumazine protein, LUMP; luminous bacteria, homologue of riboflavin synthase, luminescent protein; HET: RBF; 1.42A {Photobacterium kishitanii} PDB: 3a3b_B* 3a3g_A* | Back alignment and structure |
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>3ddy_A Lumazine protein, LUMP; luminescent bacteria, riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi} | Back alignment and structure |
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>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A* | Back alignment and structure |
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>3ddy_A Lumazine protein, LUMP; luminescent bacteria, riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi} | Back alignment and structure |
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>3a35_A Lumazine protein, LUMP; luminous bacteria, homologue of riboflavin synthase, luminescent protein; HET: RBF; 1.42A {Photobacterium kishitanii} PDB: 3a3b_B* 3a3g_A* | Back alignment and structure |
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>1kzl_A Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} SCOP: b.43.4.3 b.43.4.3 | Back alignment and structure |
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Homologous Domains in SCOP and MMDB Database
Detected by RPS-BLAST and HHsearch
Homologous Domains in SCOP70 (Version1.75) Database Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
Identity | Alignment graph | Length | Definition | E-value |
204 | riboflavin synthase subunit alpha [Candidatus Liberibac | |||
d1kzla2 | 110 | b.43.4.3 (A:93-202) Riboflavin synthase {Fission yeast | 2e-20 | |
d1i8da2 | 113 | b.43.4.3 (A:94-206) Riboflavin synthase {Escherichia co | 1e-18 | |
d1i8da1 | 93 | b.43.4.3 (A:1-93) Riboflavin synthase {Escherichia coli | 8e-14 | |
d1kzla1 | 92 | b.43.4.3 (A:1-92) Riboflavin synthase {Fission yeast (S | 4e-10 | |
d1kzla2 | 110 | b.43.4.3 (A:93-202) Riboflavin synthase {Fission yeast | 6e-05 | |
d1i8da2 | 113 | b.43.4.3 (A:94-206) Riboflavin synthase {Escherichia co | 6e-06 | |
d1i8da1 | 93 | b.43.4.3 (A:1-93) Riboflavin synthase {Escherichia coli | 3e-17 | |
d1kzla1 | 92 | b.43.4.3 (A:1-92) Riboflavin synthase {Fission yeast (S | 2e-14 |
>d1kzla2 b.43.4.3 (A:93-202) Riboflavin synthase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 110 | Back information, alignment and structure |
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class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Riboflavin synthase domain: Riboflavin synthase species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] Score = 92.7 bits (230), Expect = 2e-20 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 1/102 (0%) Query: 97 RLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPHN-LEQFIAVKGSVCLNGVSLTVNLV 155 R+ GH V GH+D EI+ G+++ + ++I KG + L+G SLT+ V Sbjct: 1 RMGGHFVQGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHV 60 Query: 156 GKNFFDVLLIRHTIEETTWKMHKVGDLINIEVDSMMRYIARL 197 + F +++I +T + VGDL+N+EVD + +Y +L Sbjct: 61 DDSTFSIMMISYTQSKVIMAKKNVGDLVNVEVDQIGKYTEKL 102 |
>d1i8da2 b.43.4.3 (A:94-206) Riboflavin synthase {Escherichia coli [TaxId: 562]} Length = 113 | Back information, alignment and structure |
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>d1i8da1 b.43.4.3 (A:1-93) Riboflavin synthase {Escherichia coli [TaxId: 562]} Length = 93 | Back information, alignment and structure |
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>d1kzla1 b.43.4.3 (A:1-92) Riboflavin synthase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 92 | Back information, alignment and structure |
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>d1kzla2 b.43.4.3 (A:93-202) Riboflavin synthase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 110 | Back information, alignment and structure |
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>d1i8da2 b.43.4.3 (A:94-206) Riboflavin synthase {Escherichia coli [TaxId: 562]} Length = 113 | Back information, alignment and structure |
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>d1i8da1 b.43.4.3 (A:1-93) Riboflavin synthase {Escherichia coli [TaxId: 562]} Length = 93 | Back information, alignment and structure |
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>d1kzla1 b.43.4.3 (A:1-92) Riboflavin synthase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 92 | Back information, alignment and structure |
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Homologous Domains in SCOP70 (Version 1.75) Database Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
Identity | Alignment graph | Length | Definition | Probability |
Target | 204 | riboflavin synthase subunit alpha [Candidatus Liberibac | ||
d1kzla2 | 110 | Riboflavin synthase {Fission yeast (Schizosaccharomyces | 100.0 | |
d1i8da2 | 113 | Riboflavin synthase {Escherichia coli [TaxId: 562]} | 100.0 | |
d1i8da1 | 93 | Riboflavin synthase {Escherichia coli [TaxId: 562]} | 99.94 | |
d1kzla1 | 92 | Riboflavin synthase {Fission yeast (Schizosaccharomyces | 99.93 | |
d1i8da1 | 93 | Riboflavin synthase {Escherichia coli [TaxId: 562]} | 99.97 | |
d1kzla1 | 92 | Riboflavin synthase {Fission yeast (Schizosaccharomyces | 99.96 | |
d1i8da2 | 113 | Riboflavin synthase {Escherichia coli [TaxId: 562]} | 99.91 | |
d1kzla2 | 110 | Riboflavin synthase {Fission yeast (Schizosaccharomyces | 99.9 |
>d1kzla2 b.43.4.3 (A:93-202) Riboflavin synthase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
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class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Riboflavin synthase domain: Riboflavin synthase species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] Probab=100.00 E-value=2.6e-41 Score=259.54 Aligned_cols=108 Identities=30% Similarity=0.515 Sum_probs=103.7 Q ss_pred CCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECC-CCCCCEECCCCEEEEEEEEEEEEEECCCEEEEEEEHHHHCCCCHH Q ss_conf 0476424540100110111002331379875134-211210023571998234578774168549999844433013300 Q gi|254780347|r 97 RLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLP-HNLEQFIAVKGSVCLNGVSLTVNLVGKNFFDVLLIRHTIEETTWK 175 (204) Q Consensus 97 ~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~-~~~~~~l~~KgsI~idGvSLTV~~~~~~~f~v~lIp~Tl~~T~l~ 175 (204) |+|||+||||||++|+|+++++.++++.+++.+| +.+.+|++.|||||+|||||||+++.+++|++++|||||++|||+ T Consensus 1 r~~GH~v~GHVd~~g~I~~i~~~~~~~~~~i~~~~~~~~~~l~~~~SIavnGvcLTV~~~~~~~f~v~lipETl~~Tnl~ 80 (110) T d1kzla2 1 RMGGHFVQGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHVDDSTFSIMMISYTQSKVIMA 80 (110) T ss_dssp CSSSCCBCSCCCEEEEEEEEEEETTEEEEEEEESSGGGGGGCCTTCEEEETTEEEEEEEECSSCEEEEECHHHHTTSGGG T ss_pred CCCEEEEEEEECEEEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHEEECCCCEEEEEEECCCEEEEEEHHHHHHHCCCC T ss_conf 94304350795689999999987985213563250555331001214774783899972569789998769987656000 Q ss_pred HCCCCCEEEEEHHHHHHHHHHHHCCCCCC Q ss_conf 24899674697135889999986023359 Q gi|254780347|r 176 MHKVGDLINIEVDSMMRYIARLYALNTSQ 204 (204) Q Consensus 176 ~~k~Gd~VNiE~D~l~kyv~r~~~~~~~~ 204 (204) .+++||+||||+|+||||++|+++.+.++ T Consensus 81 ~~~~G~~VNLE~D~lak~i~~~~~~~~~~ 109 (110) T d1kzla2 81 KKNVGDLVNVEVDQIGKYTEKLVEAHIAD 109 (110) T ss_dssp GCCTTCEEEEEECTHHHHHHHHHHHHTTT T ss_pred CCCCCCEEEEEEHHHHHHHHHHHHHHCCC T ss_conf 17799989982166999999998765269 |
>d1i8da2 b.43.4.3 (A:94-206) Riboflavin synthase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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>d1i8da1 b.43.4.3 (A:1-93) Riboflavin synthase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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>d1kzla1 b.43.4.3 (A:1-92) Riboflavin synthase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
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>d1i8da1 b.43.4.3 (A:1-93) Riboflavin synthase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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>d1kzla1 b.43.4.3 (A:1-92) Riboflavin synthase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
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>d1i8da2 b.43.4.3 (A:94-206) Riboflavin synthase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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>d1kzla2 b.43.4.3 (A:93-202) Riboflavin synthase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
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Homologous Domains in MMDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against MMDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 204 | riboflavin synthase subunit alpha [Candidatus Libe | ||
3a35_A_95-190 | 96 | (A:95-190) Lumazine protein, LUMP; luminous bacter | 5e-20 | |
3a35_A_1-94 | 94 | (A:1-94) Lumazine protein, LUMP; luminous bacteria | 1e-15 | |
3ddy_A_95-186 | 92 | (A:95-186) Lumazine protein, LUMP; luminescent bac | 2e-18 | |
3ddy_A_1-94 | 94 | (A:1-94) Lumazine protein, LUMP; luminescent bacte | 1e-15 | |
1kzl_A_6-92 | 87 | (A:6-92) Riboflavin synthase; biosynthesis of ribo | 6e-15 | |
1i8d_A_7-91 | 85 | (A:7-91) Riboflavin synthase; riboflavin biosynthe | 4e-15 | |
1i8d_A_1-6_92-213 | 128 | (A:1-6,A:92-213) Riboflavin synthase; riboflavin b | 1e-09 | |
1kzl_A_1-5_93-186 | 99 | (A:1-5,A:93-186) Riboflavin synthase; biosynthesis | 1e-09 | |
3a35_A_95-190 | 96 | (A:95-190) Lumazine protein, LUMP; luminous bacter | 4e-18 | |
3a35_A_1-94 | 94 | (A:1-94) Lumazine protein, LUMP; luminous bacteria | 7e-19 | |
3ddy_A_95-186 | 92 | (A:95-186) Lumazine protein, LUMP; luminescent bac | 9e-18 | |
3ddy_A_1-94 | 94 | (A:1-94) Lumazine protein, LUMP; luminescent bacte | 3e-18 | |
1kzl_A_6-92 | 87 | (A:6-92) Riboflavin synthase; biosynthesis of ribo | 3e-15 | |
1i8d_A_7-91 | 85 | (A:7-91) Riboflavin synthase; riboflavin biosynthe | 6e-14 |
>3a35_A (A:95-190) Lumazine protein, LUMP; luminous bacteria, homologue of riboflavin synthase, luminescent protein; HET: RBF; 1.42A {Photobacterium kishitanii} PDB: 3a3b_B* 3a3g_A*Length = 96 | Back alignment and structure |
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Score = 92.1 bits (229), Expect = 5e-20 Identities = 15/93 (16%), Positives = 40/93 (43%) Query: 102 LVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFFD 161 ++G+I G + + D + + +P +L + I + + +NGVS ++ + + Sbjct: 3 ALTGNIKGVATVDNITEEEDRLKVYIKIPKDLIENILSEDHIGINGVSHSIEEISDDIIF 62 Query: 162 VLLIRHTIEETTWKMHKVGDLINIEVDSMMRYI 194 + ++ T + G +N+E ++ Sbjct: 63 INYPKNLSITTNLGTLEKGSDVNVETLNVSNEW 95 |
>3a35_A (A:1-94) Lumazine protein, LUMP; luminous bacteria, homologue of riboflavin synthase, luminescent protein; HET: RBF; 1.42A {Photobacterium kishitanii} PDB: 3a3b_B* 3a3g_A*Length = 94 | Back alignment and structure |
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>3ddy_A (A:95-186) Lumazine protein, LUMP; luminescent bacteria, riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}Length = 92 | Back alignment and structure |
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>3ddy_A (A:1-94) Lumazine protein, LUMP; luminescent bacteria, riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}Length = 94 | Back alignment and structure |
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>1kzl_A (A:6-92) Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe}Length = 87 | Back alignment and structure |
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>1i8d_A (A:7-91) Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli}Length = 85 | Back alignment and structure |
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>1i8d_A (A:1-6,A:92-213) Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli}Length = 128 | Back alignment and structure |
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>1kzl_A (A:1-5,A:93-186) Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe}Length = 99 | Back alignment and structure |
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>3a35_A (A:95-190) Lumazine protein, LUMP; luminous bacteria, homologue of riboflavin synthase, luminescent protein; HET: RBF; 1.42A {Photobacterium kishitanii} PDB: 3a3b_B* 3a3g_A*Length = 96 | Back alignment and structure |
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>3a35_A (A:1-94) Lumazine protein, LUMP; luminous bacteria, homologue of riboflavin synthase, luminescent protein; HET: RBF; 1.42A {Photobacterium kishitanii} PDB: 3a3b_B* 3a3g_A*Length = 94 | Back alignment and structure |
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>3ddy_A (A:95-186) Lumazine protein, LUMP; luminescent bacteria, riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}Length = 92 | Back alignment and structure |
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>3ddy_A (A:1-94) Lumazine protein, LUMP; luminescent bacteria, riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}Length = 94 | Back alignment and structure |
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>1kzl_A (A:6-92) Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe}Length = 87 | Back alignment and structure |
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>1i8d_A (A:7-91) Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli}Length = 85 | Back alignment and structure |
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Homologous Domains in MMDB70 Database Detected by HHsearch
Original result of HHsearch against MMDB70 database
Identity | Alignment graph | Length | Definition | Probability |
Target | 204 | riboflavin synthase subunit alpha [Candidatus Liberibac | ||
3ddy_A_1-94 | 94 | Lumazine protein, LUMP; luminescent bacteria, ribo | 99.97 | |
3a35_A_1-94 | 94 | Lumazine protein, LUMP; luminous bacteria, homolog | 99.96 | |
3a35_A_95-190 | 96 | Lumazine protein, LUMP; luminous bacteria, homolog | 99.96 | |
3ddy_A_95-186 | 92 | Lumazine protein, LUMP; luminescent bacteria, ribo | 99.96 | |
1i8d_A_7-91 | 85 | Riboflavin synthase; riboflavin biosynthesis, anti | 99.92 | |
1kzl_A_6-92 | 87 | Riboflavin synthase; biosynthesis of riboflavin, l | 99.91 | |
1i8d_A_1-6_92-213 | 128 | Riboflavin synthase; riboflavin biosynthesis, anti | 99.15 | |
1kzl_A_1-5_93-186 | 99 | Riboflavin synthase; biosynthesis of riboflavin, l | 98.43 | |
3a35_A_95-190 | 96 | Lumazine protein, LUMP; luminous bacteria, homolog | 99.97 | |
1i8d_A_1-6_92-213 | 128 | Riboflavin synthase; riboflavin biosynthesis, anti | 99.95 | |
3ddy_A_95-186 | 92 | Lumazine protein, LUMP; luminescent bacteria, ribo | 99.94 | |
3a35_A_1-94 | 94 | Lumazine protein, LUMP; luminous bacteria, homolog | 99.93 | |
3ddy_A_1-94 | 94 | Lumazine protein, LUMP; luminescent bacteria, ribo | 99.93 | |
1kzl_A_6-92 | 87 | Riboflavin synthase; biosynthesis of riboflavin, l | 99.91 | |
1i8d_A_7-91 | 85 | Riboflavin synthase; riboflavin biosynthesis, anti | 99.91 | |
1kzl_A_1-5_93-186 | 99 | Riboflavin synthase; biosynthesis of riboflavin, l | 99.85 |
>3ddy_A (A:1-94) Lumazine protein, LUMP; luminescent bacteria, riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi} | Back alignment and structure |
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Probab=99.97 E-value=8.8e-31 Score=200.24 Aligned_cols=93 Identities=22% Similarity=0.252 Sum_probs=88.0 Q ss_pred CCCEEEEEEEEEEEEEECCCCEEEEEEECCC-CCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC Q ss_conf 9453371189999998769935999981755-112667724653331542365045556686799998656553201355 Q gi|254780347|r 1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYN-TSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS 79 (204) Q Consensus 1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~-~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~ 79 (204) ||||||+++|+|.++++.++++++.+++|.. ++.+++|+|||||||||||+++.+ ++|.|+ +|||+++|||+. T Consensus 1 MFtG~I~~~g~I~~i~~~~~~~~~~i~~~~~~~~~i~~~~SIavnGvcLTV~~v~~-----~~f~v~-ipeTl~~T~l~~ 74 (94) T 3ddy_A 1 MFRGIVQGRGVIRSISKSEDSQRHGIAFPEGMFQLVDVDTVMLVNGCSNTVVRILG-----DMVYFD-IDQALGTTTFDG 74 (94) T ss_dssp CBCSCCCEEEEEEEEEECSSCEEEEEECCTTTGGGCCTTCEEEETTEEEEEEEEET-----TEEEEE-ECTTTTTSSGGG T ss_pred CCCEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCEEEEEEEECC-----CEEEEE-CHHHHHHCCHHH T ss_conf 98824038999999997699389999917764342467878996879999999679-----879998-169730200601 Q ss_pred CCCCCCCCCCCCCHHHHCCC Q ss_conf 56566313354320000047 Q gi|254780347|r 80 WGIGTFINLERSVKLGDRLD 99 (204) Q Consensus 80 l~~G~~VNLE~a~~~g~~lg 99 (204) |++||+|||||||+++||+| T Consensus 75 ~~~G~~VNlE~~l~~~~rlG 94 (94) T 3ddy_A 75 LKEGDQVNLEIHPKFGEVVG 94 (94) T ss_dssp CCTTCEEEEECCC------- T ss_pred CCCCCEEEEECCCCCCCCCC T ss_conf 74799985420666898608 |
>3a35_A (A:1-94) Lumazine protein, LUMP; luminous bacteria, homologue of riboflavin synthase, luminescent protein; HET: RBF; 1.42A {Photobacterium kishitanii} PDB: 3a3b_B* 3a3g_A* | Back alignment and structure |
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>3a35_A (A:95-190) Lumazine protein, LUMP; luminous bacteria, homologue of riboflavin synthase, luminescent protein; HET: RBF; 1.42A {Photobacterium kishitanii} PDB: 3a3b_B* 3a3g_A* | Back alignment and structure |
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>3ddy_A (A:95-186) Lumazine protein, LUMP; luminescent bacteria, riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi} | Back alignment and structure |
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>1i8d_A (A:7-91) Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} | Back alignment and structure |
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>1kzl_A (A:6-92) Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
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>1i8d_A (A:1-6,A:92-213) Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} | Back alignment and structure |
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>1kzl_A (A:1-5,A:93-186) Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
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>3a35_A (A:95-190) Lumazine protein, LUMP; luminous bacteria, homologue of riboflavin synthase, luminescent protein; HET: RBF; 1.42A {Photobacterium kishitanii} PDB: 3a3b_B* 3a3g_A* | Back alignment and structure |
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>1i8d_A (A:1-6,A:92-213) Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} | Back alignment and structure |
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>3ddy_A (A:95-186) Lumazine protein, LUMP; luminescent bacteria, riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi} | Back alignment and structure |
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>3a35_A (A:1-94) Lumazine protein, LUMP; luminous bacteria, homologue of riboflavin synthase, luminescent protein; HET: RBF; 1.42A {Photobacterium kishitanii} PDB: 3a3b_B* 3a3g_A* | Back alignment and structure |
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>3ddy_A (A:1-94) Lumazine protein, LUMP; luminescent bacteria, riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi} | Back alignment and structure |
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>1kzl_A (A:6-92) Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
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>1i8d_A (A:7-91) Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} | Back alignment and structure |
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>1kzl_A (A:1-5,A:93-186) Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
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