254780370
argininosuccinate lyase
GeneID in NCBI database: | 8209355 | Locus tag: | CLIBASIA_01275 |
Protein GI in NCBI database: | 254780370 | Protein Accession: | YP_003064783.1 |
Gene range: | +(268037, 269458) | Protein Length: | 473aa |
Gene description: | argininosuccinate lyase | ||
COG prediction: | [E] Argininosuccinate lyase | ||
KEGG prediction: | argH; argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1] | ||
SEED prediction: | Argininosuccinate lyase (EC 4.3.2.1) | ||
Pathway involved in KEGG: | Alanine, aspartate and glutamate metabolism [PATH:las00250]
Arginine and proline metabolism [PATH:las00330] | ||
Subsystem involved in SEED: | Arginine Biosynthesis extended | ||
sequence | sequence profile |
Prediction of Local Sequence Properties
Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
Identity | Alignment graph | Length | Definition | E-value | |
Target | 473 | argininosuccinate lyase [Candidatus Liberibacter asiati | |||
254780974 | 435 | adenylosuccinate lyase [Candidatus Liberibacter as | 2e-09 | ||
254780190 | 463 | fumarate hydratase [Candidatus Liberibacter asiati | 2e-08 |
>gi|254780974|ref|YP_003065387.1| adenylosuccinate lyase [Candidatus Liberibacter asiaticus str. psy62] Length = 435 | Back alignment |
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Score = 55.5 bits (132), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 94/358 (26%), Positives = 147/358 (41%), Gaps = 32/358 (8%) Query: 54 LAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLE---DIHMNIEARLTSL---IGS 107 LAK G+I + ++ I E + + F R +E I ++ A LT L IG Sbjct: 34 LAKLGVIPEKSSKNIWEKGR-------NAVFNVDRIMELDSIIKHDVIAFLTHLAEIIGP 86 Query: 108 IAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQ 167 A +H + +D + + + T + D+ +LL L +A E+ +T+ G +H Sbjct: 87 DARFIHQGMTSSDILDTCFSIQLMRSTDILLEDIDQLLESLKKRAFEYKDTLTIGRSHGI 146 Query: 168 TAQPVTFG-HHCMAYVEMFGRDISRFFDSIERLDECPL-GAAALAGTSFPIDRHFTAKEL 225 A+P TFG MAY E F R R + E + C + G+ P A + Sbjct: 147 HAEPTTFGLKLAMAYAE-FSRSRKRLLTAREEIAVCAISGSVGTFSNIHPYVEQHVADAM 205 Query: 226 GFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEII-LWSTPQFNFVRLSDAFST 284 G + +S V RD S + A + R+A EI L T Sbjct: 206 GLKTDPISS--QVIARDRHAMYFSVLGVIASSIERVATEIRHLQRTEILEVEEFFHPGQK 263 Query: 285 GSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDK-EPVF--DAL 341 GSS MP KRNP E + + I ++ M+ + L + +D+ E V DA Sbjct: 264 GSSSMPHKRNPILTENLTGLSRLIRS---HVIPAMENVALWHERDISHSSVERVIGPDAT 320 Query: 342 ETLQIIILAISAMIEDLTVN----KDRLQEAATKSHSTATDLADWLVSHAGLPFREAH 395 L + + +IE+L V KD L++ HS LA ++ AG+ EA+ Sbjct: 321 IHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLA---LTQAGVSREEAY 375 |
>gi|254780190|ref|YP_003064603.1| fumarate hydratase [Candidatus Liberibacter asiaticus str. psy62] Length = 463 | Back alignment |
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Score = 52.4 bits (124), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/335 (22%), Positives = 128/335 (38%), Gaps = 49/335 (14%) Query: 97 IEARLTSLIGSIAGK---------MHTARSRNDQVALDLRLWIKEKTLE-ITNDLKKLLT 146 I R ++G + G ++ +S ND + + E+ + + L+ L Sbjct: 110 ISNRAIEILGGVMGSKSPVHPNDHVNLCQSSNDTYPTAIHIACAERIVHRLLPTLRNLHV 169 Query: 147 ILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGA 206 L K + + I G TH Q A P+T G Y I R +++ L E G Sbjct: 170 ALTKKISDFQDIIKIGRTHTQDATPLTLGQEFSGYATQVKNSIKRIEMTLDGLYELAQGG 229 Query: 207 AALA-GTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFI--------LECLSHSAIC--- 254 A+ G + P+ GF E +I ++ FI L C A C Sbjct: 230 TAVGTGLNTPV---------GFAEKVAQNIRDITGLPFITAPNKFEALACHDAIAFCHGA 280 Query: 255 ----AMHMSRLAEEI-ILWSTPQFNFVRLS-DAFSTGSSIMPQKRNPDGAELVRAKTGRI 308 A + ++A +I L S P+ L GSSIMP K NP E + I Sbjct: 281 INTSATALFKIANDIRFLGSGPRSGLGELMLPENEPGSSIMPGKVNPTQCEAITQVCAHI 340 Query: 309 --NGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAM----IEDLTVNK 362 N A ++ L K M ++ L+++Q++ +I + IE + K Sbjct: 341 FGNHAAITFANSQGHFELNVYKPMI-----AYNVLQSIQLLSDSIDSFTINCIEGIQARK 395 Query: 363 DRLQEAATKSHSTATDLADWL-VSHAGLPFREAHY 396 + +Q + +S T L + +A + ++AH+ Sbjct: 396 ENIQLSLNRSLMLVTALTSKIGYDNASMIAKKAHH 430 |
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
Identity | Alignment graph | Length | Definition | Round | E-value |
Target | 473 | argininosuccinate lyase [Candidatus Liberibacter asiati | |||
315121838 | 473 | argininosuccinate lyase [Candidatus Liberibacter solana | 1 | 0.0 | |
332716387 | 466 | Argininosuccinate lyase [Agrobacterium sp. H13-3] Lengt | 1 | 0.0 | |
254700619 | 466 | argininosuccinate lyase [Brucella suis bv. 5 str. 513] | 1 | 0.0 | |
190893632 | 467 | argininosuccinate lyase [Rhizobium etli CIAT 652] Lengt | 1 | 0.0 | |
306843418 | 466 | argininosuccinate lyase [Brucella sp. BO1] Length = 466 | 1 | 0.0 | |
327193554 | 467 | argininosuccinate lyase protein [Rhizobium etli CNPAF51 | 1 | 0.0 | |
294851219 | 468 | argininosuccinate lyase [Brucella sp. NVSL 07-0026] Len | 1 | 0.0 | |
23502829 | 466 | argininosuccinate lyase [Brucella suis 1330] Length = 4 | 1 | 0.0 | |
297247215 | 468 | argininosuccinate lyase [Brucella abortus bv. 5 str. B3 | 1 | 0.0 | |
17986370 | 466 | argininosuccinate lyase [Brucella melitensis bv. 1 str. | 1 | 0.0 |
>gi|315121838|ref|YP_004062327.1| argininosuccinate lyase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 473 | Back alignment and organism information |
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Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/469 (86%), Positives = 441/469 (94%) Query: 1 MSKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGII 60 M KK KS EVN+MWGGRFSSSPSWIMEKINVSIDFDKKLF+QDI GS+VHT MLAKQGII Sbjct: 1 MRKKTKSTEVNKMWGGRFSSSPSWIMEKINVSIDFDKKLFDQDIRGSEVHTNMLAKQGII 60 Query: 61 SSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRND 120 + + QKII+GLK+IR+EI DGSFVFSRDLEDIHMNIEARLT+LIG +AGKMHTARSRND Sbjct: 61 TPNDCQKIIDGLKIIRSEITDGSFVFSRDLEDIHMNIEARLTALIGPVAGKMHTARSRND 120 Query: 121 QVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMA 180 QVALDLRLWIKEKT+EITNDL LTILL+KA+EHH+TIMPGFTHLQTAQPVTFGHHCMA Sbjct: 121 QVALDLRLWIKEKTIEITNDLVAFLTILLNKAKEHHDTIMPGFTHLQTAQPVTFGHHCMA 180 Query: 181 YVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSD 240 YVEMFGRDI+RF DSI+RLDECPLG AALAGTSFPIDRHFTA+ELGFREPTRNSIDSVSD Sbjct: 181 YVEMFGRDITRFCDSIQRLDECPLGVAALAGTSFPIDRHFTAQELGFREPTRNSIDSVSD 240 Query: 241 RDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAEL 300 RDFI+ECLSH+AICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAEL Sbjct: 241 RDFIIECLSHAAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAEL 300 Query: 301 VRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTV 360 VRAKTGRING+LLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQ++ILA+SAMI+DLTV Sbjct: 301 VRAKTGRINGSLLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQVMILAMSAMIKDLTV 360 Query: 361 NKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAML 420 +KDRLQEAA+ S+STATDLADWLV AGLPFREAHYITG VSLAEKN CELA+LPL ML Sbjct: 361 HKDRLQEAASSSNSTATDLADWLVRCAGLPFREAHYITGRAVSLAEKNNCELAELPLEML 420 Query: 421 QQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNI 469 +ISP+ITS+VYDILKV+SSI SRKSFGGT EVLKQV YWRNRI+N+ Sbjct: 421 TKISPIITSSVYDILKVKSSILSRKSFGGTSPEEVLKQVVYWRNRIKNL 469 |
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|332716387|ref|YP_004443853.1| Argininosuccinate lyase [Agrobacterium sp. H13-3] Length = 466 | Back alignment and organism information |
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Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/465 (67%), Positives = 375/465 (80%) Query: 1 MSKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGII 60 M+ NQMWGGRF+S PS IME+IN SI FDKKL+ QDI GS H TMLA++GII Sbjct: 1 MADGTDQKSSNQMWGGRFASGPSAIMEEINASIGFDKKLYAQDIRGSIAHATMLAEKGII 60 Query: 61 SSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRND 120 S E+ KI+ GL I +EI GSF FSR LEDIHMNIEARL +LIG+ AG++HTARSRND Sbjct: 61 SQEDKDKIVHGLNTILSEIEAGSFEFSRKLEDIHMNIEARLATLIGTAAGRLHTARSRND 120 Query: 121 QVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMA 180 QVALD RLW+KE+ + L L++ LD+AEE+ +T+MPGFTHLQTAQPVTFGHHCMA Sbjct: 121 QVALDFRLWVKEELQKTEGMLTALISAFLDRAEENADTVMPGFTHLQTAQPVTFGHHCMA 180 Query: 181 YVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSD 240 YVEMFGRD +R +IE LDE P+GAAALAGT +PIDRH TAK LGFREPTRNSID+VSD Sbjct: 181 YVEMFGRDRARVRHAIEHLDESPIGAAALAGTGYPIDRHMTAKALGFREPTRNSIDTVSD 240 Query: 241 RDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAEL 300 RDF LE LS ++ICA H+SRLAEEI++WSTPQF F+RLSDAFSTGSSIMPQK+NPD AEL Sbjct: 241 RDFALEFLSIASICATHLSRLAEEIVIWSTPQFGFIRLSDAFSTGSSIMPQKKNPDAAEL 300 Query: 301 VRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTV 360 VRAKTGRING+L++LLT+MKGLPLAYSKDMQEDKE VFDA E+L++ I A++ MI DL V Sbjct: 301 VRAKTGRINGSLVALLTVMKGLPLAYSKDMQEDKEQVFDAAESLELAIAAMTGMIRDLEV 360 Query: 361 NKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAML 420 KDR++ AA +STATDLADWLV AGLPFR+AH++TG V+LAEK C+LA L L L Sbjct: 361 RKDRMRAAAGSGYSTATDLADWLVREAGLPFRDAHHVTGNAVALAEKKGCDLADLSLEDL 420 Query: 421 QQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNR 465 Q I P ITS V+D+L VE+S++SR SFGGT +EV KQ+ +WR R Sbjct: 421 QAIHPAITSGVFDVLSVEASVASRTSFGGTAPSEVKKQIAWWRGR 465 |
Species: Agrobacterium sp. H13-3 Genus: Agrobacterium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|254700619|ref|ZP_05162447.1| argininosuccinate lyase [Brucella suis bv. 5 str. 513] Length = 466 | Back alignment and organism information |
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Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/456 (68%), Positives = 370/456 (81%) Query: 11 NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70 NQMWGGRF+S P IME+IN SI FD+KL+ QDI GS H MLAK GII++E+ ++I Sbjct: 8 NQMWGGRFASGPDAIMEEINASIGFDRKLYAQDIQGSLAHAAMLAKTGIIAAEDHKQIEN 67 Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130 GLK IR EI +G F FSR LEDIHMNIEARL LIG AG++HTARSRNDQVA+D RLW+ Sbjct: 68 GLKTIRKEIEEGKFTFSRKLEDIHMNIEARLAELIGPAAGRLHTARSRNDQVAVDFRLWV 127 Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 K++ + LK L+ L++AEEH T+MPGFTHLQTAQPVTFGHHCMAYVEMFGRD+S Sbjct: 128 KQELEKTAAALKNLIEAFLERAEEHAATVMPGFTHLQTAQPVTFGHHCMAYVEMFGRDLS 187 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 R D+IER+DE PLGAAALAGT FPIDRH TAK LGFREPTRNS+DSVSDRD+ LE LS Sbjct: 188 RVRDAIERMDESPLGAAALAGTGFPIDRHMTAKALGFREPTRNSLDSVSDRDYALEFLSL 247 Query: 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 +AICA H+SRLAEEI++WSTPQFNFVRLSDAFSTGSSIMPQK+NPD AELVRAKTGRING Sbjct: 248 AAICAGHLSRLAEEIVIWSTPQFNFVRLSDAFSTGSSIMPQKKNPDAAELVRAKTGRING 307 Query: 311 ALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT 370 +L++LLTIMKGLPLAYSKDMQEDKE VFDA E L++ I A++ M+ DLTVN +++AA Sbjct: 308 SLVALLTIMKGLPLAYSKDMQEDKEQVFDAAENLELAIAAMAGMVRDLTVNVAAMKKAAG 367 Query: 371 KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSA 430 +STATDLADWLV GLPFREAH++TG V+LAE + +LAKL L LQ I+P IT+ Sbjct: 368 SGYSTATDLADWLVRTLGLPFREAHHVTGRAVALAESRKVDLAKLSLEELQSINPAITAE 427 Query: 431 VYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRI 466 V+D L VE S+ SR+SFGGT EV +Q+ YW+ RI Sbjct: 428 VFDYLTVEKSVKSRQSFGGTAPQEVRRQIRYWKKRI 463 |
Species: Brucella suis Genus: Brucella Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|190893632|ref|YP_001980174.1| argininosuccinate lyase [Rhizobium etli CIAT 652] Length = 467 | Back alignment and organism information |
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Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/459 (69%), Positives = 370/459 (80%) Query: 7 SNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQ 66 S NQMWGGRF+S P IME+IN SI FDKKLF QDI GS H TMLA QGIIS+E+ Sbjct: 8 SKSSNQMWGGRFASGPDAIMEEINASIGFDKKLFAQDIRGSIAHATMLAHQGIISAEDKD 67 Query: 67 KIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDL 126 KI+ GL I +EI G+F FSR LEDIHMNIEARL +LIG AG++HTARSRNDQVALD Sbjct: 68 KIVHGLNTILSEIESGNFEFSRRLEDIHMNIEARLATLIGPAAGRLHTARSRNDQVALDF 127 Query: 127 RLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFG 186 RLW+KE+ + L L+ LD+AEEH ++MPGFTHLQTAQPVTFGHHCMAYVEMFG Sbjct: 128 RLWVKEELEKTEKMLTGLIAAFLDRAEEHAESVMPGFTHLQTAQPVTFGHHCMAYVEMFG 187 Query: 187 RDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILE 246 RD SR +IE LDE P+GAAALAGT +PIDRH TAK LGFREPTRNSID+VSDRDF +E Sbjct: 188 RDRSRVRHAIEHLDESPIGAAALAGTGYPIDRHMTAKALGFREPTRNSIDTVSDRDFAIE 247 Query: 247 CLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTG 306 L+ +AI MH+SRLAEEI++WSTPQF FVRLSDAFSTGSSIMPQK+NPD AELVRAKTG Sbjct: 248 FLAIAAITGMHLSRLAEEIVIWSTPQFGFVRLSDAFSTGSSIMPQKKNPDAAELVRAKTG 307 Query: 307 RINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQ 366 RING+L++LLTIMKGLPLAYSKDMQEDKE VFDA E+L++ I A++ M+ D+TVN R++ Sbjct: 308 RINGSLIALLTIMKGLPLAYSKDMQEDKEQVFDAAESLELAIAAMTGMVRDMTVNTARMK 367 Query: 367 EAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPV 426 AA STATDLADWLV AGLPFR+AH++TG V+LAE C+LA+LPLA LQ I P Sbjct: 368 AAAGSGFSTATDLADWLVREAGLPFRDAHHVTGRAVALAESKGCDLAELPLADLQAIHPD 427 Query: 427 ITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNR 465 IT VYD+L VE+S++SRKSFGGT +EV KQ+ +WR R Sbjct: 428 ITDKVYDVLTVEASVASRKSFGGTAPSEVRKQIAFWRAR 466 |
Species: Rhizobium etli Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|306843418|ref|ZP_07476019.1| argininosuccinate lyase [Brucella sp. BO1] Length = 466 | Back alignment and organism information |
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Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/456 (68%), Positives = 369/456 (80%) Query: 11 NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70 NQMWGGRF+S P IME+IN SI FD+KL+ QDI GS H MLAK GII++E+ ++I Sbjct: 8 NQMWGGRFASGPDAIMEEINASIGFDRKLYAQDIQGSLAHAAMLAKTGIIAAEDHKQIEN 67 Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130 GLK IR EI +G F FSR LEDIHMNIEARL LIG AG++HTARSRNDQVA+D RLW+ Sbjct: 68 GLKTIRKEIEEGKFTFSRKLEDIHMNIEARLAELIGPAAGRLHTARSRNDQVAVDFRLWV 127 Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 K++ + LK L+ L++AEEH T+MPGFTHLQTAQPVTFGHHCMAYVEMFGRD+S Sbjct: 128 KQELEKTAAALKNLIEAFLERAEEHAATVMPGFTHLQTAQPVTFGHHCMAYVEMFGRDLS 187 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 R D+IER+DE PLGAAALAGT FPIDRH TAK LGFREPTRNS+DSVSDRD+ LE LS Sbjct: 188 RVRDAIERMDESPLGAAALAGTGFPIDRHMTAKALGFREPTRNSLDSVSDRDYALEFLSL 247 Query: 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 +AICA H+SRLAEEI++WSTPQFNFVRLSDAFSTGSSIMPQK+NPD AELVRAKTGRING Sbjct: 248 AAICAGHLSRLAEEIVIWSTPQFNFVRLSDAFSTGSSIMPQKKNPDAAELVRAKTGRING 307 Query: 311 ALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT 370 +L++LLTIMKGLPLAYSKDMQEDKE VFDA E L++ I A++ M+ DLTVN +++AA Sbjct: 308 SLVALLTIMKGLPLAYSKDMQEDKEQVFDAAENLELAIAAMAGMVRDLTVNVAAMKKAAG 367 Query: 371 KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSA 430 +STATDLADWLV GLPFREAH++TG V+LAE + +LAKL L LQ I+P IT+ Sbjct: 368 SGYSTATDLADWLVRELGLPFREAHHVTGRAVALAESRKVDLAKLSLEELQSINPAITAE 427 Query: 431 VYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRI 466 V+ L VE S+ SR+SFGGT EV +Q+ YW+ RI Sbjct: 428 VFGYLTVEKSVKSRQSFGGTAPQEVRRQIRYWKKRI 463 |
Species: Brucella sp. BO1 Genus: Brucella Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|327193554|gb|EGE60444.1| argininosuccinate lyase protein [Rhizobium etli CNPAF512] Length = 467 | Back alignment and organism information |
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Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/455 (69%), Positives = 369/455 (81%) Query: 11 NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70 NQMWGGRF+S P IME+IN SI FDKKLF QDI GS H TMLA QGIISS++ KI+ Sbjct: 12 NQMWGGRFASGPDAIMEEINASIGFDKKLFAQDIRGSIAHATMLAHQGIISSDDKDKIVH 71 Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130 GL I +EI G+F FSR LEDIHMNIEARL +LIG AG++HTARSRNDQVALD RLW+ Sbjct: 72 GLNTILSEIESGNFEFSRRLEDIHMNIEARLATLIGPAAGRLHTARSRNDQVALDFRLWV 131 Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 KE+ + L L+ LD+AEEH ++MPGFTHLQTAQPVTFGHHCMAYVEMFGRD S Sbjct: 132 KEELEKTEKMLTGLIAAFLDRAEEHAESVMPGFTHLQTAQPVTFGHHCMAYVEMFGRDRS 191 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 R +IE LDE P+GAAALAGT +PIDRH TAK LGFREPTRNSID+VSDRDF +E L+ Sbjct: 192 RVRHAIEHLDESPIGAAALAGTGYPIDRHMTAKALGFREPTRNSIDTVSDRDFAIEFLAI 251 Query: 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 +AI MH+SRLAEEI++WSTPQF FVRLSDAFSTGSSIMPQK+NPD AELVRAKTGRING Sbjct: 252 AAISGMHLSRLAEEIVIWSTPQFGFVRLSDAFSTGSSIMPQKKNPDAAELVRAKTGRING 311 Query: 311 ALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT 370 +L++LLTIMKGLPLAYSKDMQEDKE VFDA E+L++ I A++ M+ D+TVN R++ AA Sbjct: 312 SLIALLTIMKGLPLAYSKDMQEDKEQVFDAAESLELAIAAMTGMVRDMTVNTARMKAAAG 371 Query: 371 KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSA 430 STATDLADWLV AGLPFR+AH++TG V+LAE C+LA+LPLA LQ I P IT Sbjct: 372 SGFSTATDLADWLVREAGLPFRDAHHVTGRAVALAESKGCDLAELPLADLQAIHPDITDK 431 Query: 431 VYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNR 465 VYD+L VE+S++SRKSFGGT +EV KQ+ +WR R Sbjct: 432 VYDVLTVEASVASRKSFGGTAPSEVRKQIAFWRAR 466 |
Species: Rhizobium etli Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|294851219|ref|ZP_06791892.1| argininosuccinate lyase [Brucella sp. NVSL 07-0026] Length = 468 | Back alignment and organism information |
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Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/456 (68%), Positives = 369/456 (80%) Query: 11 NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70 NQMWGGRF+S P IME+IN SI FD+KL+ QDI GS H MLAK GII++E+ ++I Sbjct: 10 NQMWGGRFASGPDAIMEEINASIGFDRKLYAQDIQGSLAHAAMLAKTGIIAAEDHKQIEN 69 Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130 GLK IR EI +G F FSR LEDIHMNIEARL LIG AG++HTARSRNDQVA+D RLW+ Sbjct: 70 GLKTIRKEIEEGKFTFSRKLEDIHMNIEARLAELIGPAAGRLHTARSRNDQVAVDFRLWV 129 Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 K++ + LK L+ L++AEEH T+MPGFTHLQTAQPVTFGHHCMAYVEMFGRD+S Sbjct: 130 KQELEKTAAALKNLIEAFLERAEEHAATVMPGFTHLQTAQPVTFGHHCMAYVEMFGRDLS 189 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 R D+IER+DE PLGAAALAGT FPIDRH TAK LGFREPTRNS+DSVSDRD+ LE LS Sbjct: 190 RVRDAIERMDESPLGAAALAGTGFPIDRHMTAKALGFREPTRNSLDSVSDRDYALEFLSL 249 Query: 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 +AICA H+SRLAEEI++WSTPQFNFVRLSDAFSTGSSIMPQK+NPD AELVRAKTGRING Sbjct: 250 AAICAGHLSRLAEEIVIWSTPQFNFVRLSDAFSTGSSIMPQKKNPDAAELVRAKTGRING 309 Query: 311 ALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT 370 +L++LLTIMKGLPLAYSKDMQEDKE VFDA E L++ I A++ M+ DLTVN +++AA Sbjct: 310 SLVALLTIMKGLPLAYSKDMQEDKEQVFDAAENLELAIAAMAGMVRDLTVNVAAMKKAAG 369 Query: 371 KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSA 430 +STATDLADWLV GLPFREAH++TG V+LAE + +LAKL L LQ I+P IT+ Sbjct: 370 SGYSTATDLADWLVRTLGLPFREAHHVTGRAVALAESRKVDLAKLSLEELQSINPAITAE 429 Query: 431 VYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRI 466 V+ L VE S+ SR+SFGGT EV +Q+ YW+ RI Sbjct: 430 VFGYLTVEKSVKSRQSFGGTAPQEVRRQIRYWKKRI 465 |
Species: Brucella sp. NVSL 07-0026 Genus: Brucella Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|23502829|ref|NP_698956.1| argininosuccinate lyase [Brucella suis 1330] Length = 466 | Back alignment and organism information |
---|
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/456 (68%), Positives = 369/456 (80%) Query: 11 NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70 NQMWGGRF+S P IME+IN SI FD+KL+ QDI GS H MLAK GII++E+ ++I Sbjct: 8 NQMWGGRFASGPDAIMEEINASIGFDRKLYAQDIQGSLAHAAMLAKTGIIAAEDHKQIEN 67 Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130 GLK IR EI +G F FSR LEDIHMNIEARL LIG AG++HTARSRNDQVA+D RLW+ Sbjct: 68 GLKTIRKEIEEGKFTFSRKLEDIHMNIEARLAELIGPAAGRLHTARSRNDQVAVDFRLWV 127 Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 K++ + LK L+ L++AEEH T+MPGFTHLQTAQPVTFGHHCMAYVEMFGRD+S Sbjct: 128 KQELEKTAAALKNLIEAFLERAEEHAATVMPGFTHLQTAQPVTFGHHCMAYVEMFGRDLS 187 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 R D+IER+DE PLGAAALAGT FPIDRH TAK LGFREPTRNS+DSVSDRD+ LE LS Sbjct: 188 RVRDAIERMDESPLGAAALAGTGFPIDRHMTAKALGFREPTRNSLDSVSDRDYALEFLSL 247 Query: 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 +AICA H+SRLAEEI++WSTPQFNFVRLSDAFSTGSSIMPQK+NPD AELVRAKTGRING Sbjct: 248 AAICAGHLSRLAEEIVIWSTPQFNFVRLSDAFSTGSSIMPQKKNPDAAELVRAKTGRING 307 Query: 311 ALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT 370 +L++LLTIMKGLPLAYSKDMQEDKE VFDA E L++ I A++ M+ DLTVN +++AA Sbjct: 308 SLVALLTIMKGLPLAYSKDMQEDKEQVFDAAENLELAIAAMAGMVRDLTVNVAAMKKAAG 367 Query: 371 KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSA 430 +STATDLADWLV GLPFREAH++TG V+LAE + +LAKL L LQ I+P IT+ Sbjct: 368 SGYSTATDLADWLVRTLGLPFREAHHVTGRAVALAESRKVDLAKLSLEELQSINPAITAE 427 Query: 431 VYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRI 466 V+ L VE S+ SR+SFGGT EV +Q+ YW+ RI Sbjct: 428 VFGYLTVEKSVKSRQSFGGTAPQEVRRQIRYWKKRI 463 |
Species: Brucella suis Genus: Brucella Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|297247215|ref|ZP_06930933.1| argininosuccinate lyase [Brucella abortus bv. 5 str. B3196] Length = 468 | Back alignment and organism information |
---|
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/456 (68%), Positives = 369/456 (80%) Query: 11 NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70 NQMWGGRF+S P IME+IN SI FD+KL+ QDI GS H MLAK GII++E+ ++I Sbjct: 10 NQMWGGRFASGPDAIMEEINASIGFDRKLYAQDIQGSLAHAAMLAKTGIIAAEDHKQIEN 69 Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130 GLK IR EI +G F FSR LEDIHMNIEARL LIG AG++HTARSRNDQVA+D RLW+ Sbjct: 70 GLKTIRKEIEEGKFTFSRKLEDIHMNIEARLAELIGPAAGRLHTARSRNDQVAVDFRLWV 129 Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 K++ + LK L+ L++AEEH T+MPGFTHLQTAQPVTFGHHCMAYVEMFGRD+S Sbjct: 130 KQELEKTAAALKNLIEAFLERAEEHAATVMPGFTHLQTAQPVTFGHHCMAYVEMFGRDLS 189 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 R D+IER+DE PLGAAALAGT FPIDRH TAK LGFREPTRNS+DSVSDRD+ LE LS Sbjct: 190 RVRDAIERIDESPLGAAALAGTGFPIDRHMTAKALGFREPTRNSLDSVSDRDYALEFLSL 249 Query: 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 +AICA H+SRLAEEI++WSTPQFNFVRLSDAFSTGSSIMPQK+NPD AELVRAKTGRING Sbjct: 250 AAICAGHLSRLAEEIVIWSTPQFNFVRLSDAFSTGSSIMPQKKNPDAAELVRAKTGRING 309 Query: 311 ALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT 370 +L++LLTIMKGLPLAYSKDMQEDKE VFDA E L++ I A++ M+ DLTVN +++AA Sbjct: 310 SLVALLTIMKGLPLAYSKDMQEDKEQVFDAAENLELAIAAMAGMVRDLTVNVAAMKKAAG 369 Query: 371 KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSA 430 +STATDLADWLV GLPFREAH++TG V+LAE + +LAKL L LQ I+P IT+ Sbjct: 370 SGYSTATDLADWLVRTLGLPFREAHHVTGRAVALAESRKVDLAKLSLEELQSINPAITAE 429 Query: 431 VYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRI 466 V+ L VE S+ SR+SFGGT EV +Q+ YW+ RI Sbjct: 430 VFGYLTVEKSVKSRQSFGGTAPQEVRRQIRYWKKRI 465 |
Species: Brucella abortus Genus: Brucella Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|17986370|ref|NP_539004.1| argininosuccinate lyase [Brucella melitensis bv. 1 str. 16M] Length = 466 | Back alignment and organism information |
---|
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/456 (68%), Positives = 369/456 (80%) Query: 11 NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70 NQMWGGRF+S P IME+IN SI FD+KL+ QDI GS H MLAK GII++E+ ++I Sbjct: 8 NQMWGGRFASGPDAIMEEINASIGFDRKLYAQDIQGSLAHAAMLAKTGIIAAEDHKQIEN 67 Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130 GLK IR EI +G F FSR LEDIHMNIEARL LIG AG++HTARSRNDQVA+D RLW+ Sbjct: 68 GLKTIRKEIEEGKFTFSRKLEDIHMNIEARLAELIGPAAGRLHTARSRNDQVAVDFRLWV 127 Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 K++ + LK L+ L++AEEH T+MPGFTHLQTAQPVTFGHHCMAYVEMFGRD+S Sbjct: 128 KQELEKTAAALKNLIEAFLERAEEHAATVMPGFTHLQTAQPVTFGHHCMAYVEMFGRDLS 187 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 R D+IER+DE PLGAAALAGT FPIDRH TAK LGFREPTRNS+DSVSDRD+ LE LS Sbjct: 188 RVRDAIERIDESPLGAAALAGTGFPIDRHMTAKALGFREPTRNSLDSVSDRDYALEFLSL 247 Query: 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 +AICA H+SRLAEEI++WSTPQFNFVRLSDAFSTGSSIMPQK+NPD AELVRAKTGRING Sbjct: 248 AAICAGHLSRLAEEIVIWSTPQFNFVRLSDAFSTGSSIMPQKKNPDAAELVRAKTGRING 307 Query: 311 ALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT 370 +L++LLTIMKGLPLAYSKDMQEDKE VFDA E L++ I A++ M+ DLTVN +++AA Sbjct: 308 SLVALLTIMKGLPLAYSKDMQEDKEQVFDAAENLELAIAAMAGMVRDLTVNVAAMKKAAG 367 Query: 371 KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSA 430 +STATDLADWLV GLPFREAH++TG V+LAE + +LAKL L LQ I+P IT+ Sbjct: 368 SGYSTATDLADWLVRTLGLPFREAHHVTGRAVALAESRKVDLAKLSLEELQSINPAITAE 427 Query: 431 VYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRI 466 V+ L VE S+ SR+SFGGT EV +Q+ YW+ RI Sbjct: 428 VFGYLTVEKSVKSRQSFGGTAPQEVRRQIRYWKKRI 463 |
Species: Brucella melitensis Genus: Brucella Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
Identity | Alignment graph | Length | Definition | E-value |
Target | 473 | argininosuccinate lyase [Candidatus Liberibacter asiati | ||
COG0165 | 459 | COG0165, ArgH, Argininosuccinate lyase [Amino acid tran | 0.0 | |
PRK00855 | 459 | PRK00855, PRK00855, argininosuccinate lyase; Provisiona | 0.0 | |
TIGR00838 | 455 | TIGR00838, argH, argininosuccinate lyase | 1e-171 | |
PLN02646 | 474 | PLN02646, PLN02646, argininosuccinate lyase | 1e-162 | |
PRK04833 | 455 | PRK04833, PRK04833, argininosuccinate lyase; Provisiona | 1e-149 | |
KOG1316 | 464 | KOG1316, KOG1316, KOG1316, Argininosuccinate lyase [Ami | 1e-143 | |
PRK12308 | 614 | PRK12308, PRK12308, bifunctional argininosuccinate lyas | 1e-140 | |
cd01359 | 435 | cd01359, Argininosuccinate_lyase, Argininosuccinate lya | 0.0 | |
cd01334 | 325 | cd01334, Lyase_I, Lyase class I family; a group of prot | 1e-109 | |
TIGR00928 | 435 | TIGR00928, purB, adenylosuccinate lyase | 8e-16 | |
COG0114 | 462 | COG0114, FumC, Fumarase [Energy production and conversi | 1e-12 | |
PRK14515 | 479 | PRK14515, PRK14515, aspartate ammonia-lyase; Provisiona | 1e-12 | |
PRK07492 | 435 | PRK07492, PRK07492, adenylosuccinate lyase; Provisional | 1e-07 | |
pfam00206 | 312 | pfam00206, Lyase_1, Lyase | 1e-69 | |
PRK02186 | 887 | PRK02186, PRK02186, argininosuccinate lyase; Provisiona | 2e-57 | |
PRK06389 | 434 | PRK06389, PRK06389, argininosuccinate lyase; Provisiona | 7e-28 | |
COG0015 | 438 | COG0015, PurB, Adenylosuccinate lyase [Nucleotide trans | 2e-24 | |
PRK06390 | 451 | PRK06390, PRK06390, adenylosuccinate lyase; Provisional | 5e-08 | |
PRK06705 | 502 | PRK06705, PRK06705, argininosuccinate lyase; Provisiona | 9e-51 | |
cd01594 | 231 | cd01594, Lyase_I_like, Lyase class I_like superfamily: | 1e-50 | |
TIGR02426 | 338 | TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-muconate cy | 2e-12 | |
cd01595 | 381 | cd01595, Adenylsuccinate_lyase_like, Adenylsuccinate ly | 3e-23 | |
cd01360 | 387 | cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase | 3e-15 | |
PRK08540 | 449 | PRK08540, PRK08540, adenylosuccinate lyase; Reviewed | 1e-11 | |
PRK08470 | 442 | PRK08470, PRK08470, adenylosuccinate lyase; Provisional | 3e-07 | |
PRK13353 | 473 | PRK13353, PRK13353, aspartate ammonia-lyase; Provisiona | 2e-20 | |
cd01597 | 437 | cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate | 4e-20 | |
COG1027 | 471 | COG1027, AspA, Aspartate ammonia-lyase [Amino acid tran | 3e-17 | |
cd01357 | 450 | cd01357, Aspartase, Aspartase | 5e-17 | |
TIGR00839 | 468 | TIGR00839, aspA, aspartate ammonia-lyase | 1e-14 | |
KOG2700 | 481 | KOG2700, KOG2700, KOG2700, Adenylosuccinate lyase [Nucl | 3e-09 | |
cd01596 | 450 | cd01596, Aspartase_like, aspartase (L-aspartate ammonia | 1e-15 | |
PRK12273 | 472 | PRK12273, aspA, aspartate ammonia-lyase; Provisional | 1e-11 | |
cd01362 | 455 | cd01362, Fumarase_classII, Class II fumarases | 4e-09 | |
PLN00134 | 458 | PLN00134, PLN00134, fumarate hydratase; Provisional | 6e-09 | |
KOG1317 | 487 | KOG1317, KOG1317, KOG1317, Fumarase [Energy production | 7e-09 | |
TIGR00979 | 458 | TIGR00979, fumC_II, fumarate hydratase, class II | 1e-08 | |
PRK09053 | 452 | PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cycloiso | 2e-07 | |
PRK07380 | 431 | PRK07380, PRK07380, adenylosuccinate lyase; Provisional | 8e-05 | |
cd03302 | 436 | cd03302, Adenylsuccinate_lyase_2, Adenylsuccinate lyase | 2e-04 | |
PRK00485 | 464 | PRK00485, fumC, fumarate hydratase; Reviewed | 4e-09 |
>gnl|CDD|30514 COG0165, ArgH, Argininosuccinate lyase [Amino acid transport and metabolism] | Back alignment and domain information |
---|
Score = 635 bits (1639), Expect = 0.0 Identities = 258/458 (56%), Positives = 329/458 (71%), Gaps = 1/458 (0%) Query: 11 NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70 N++WGGRFS P ++++ N SI FDK+L E DI GS H MLAKQGII+ EEA KI+E Sbjct: 3 NKLWGGRFSGGPDPLVKEFNASISFDKRLAEYDIAGSIAHAKMLAKQGIITEEEAAKILE 62 Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130 GL+ + EI G F D ED+H IEARL IG + GK+HT RSRNDQVA DLRLW+ Sbjct: 63 GLEELLEEIRAGKFELDPDDEDVHTAIEARLIERIGDVGGKLHTGRSRNDQVATDLRLWL 122 Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 ++K LE+ ++ L LLD AEEH T+MPG+THLQ AQPVTF HH +AY EM RDI Sbjct: 123 RDKLLELLELIRILQKALLDLAEEHAETVMPGYTHLQRAQPVTFAHHLLAYAEMLARDIE 182 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 R D+++R++ PLGA ALAGT FPIDR TA+ LGF TRNS+D+VSDRDFILE LS Sbjct: 183 RLRDALKRVNVSPLGAGALAGTPFPIDRERTAELLGFDAVTRNSLDAVSDRDFILEFLSA 242 Query: 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 +A+ +H+SRLAE++ILWS+P+F F+ L D FSTGSSIMPQK+NPD EL+R K GR+ G Sbjct: 243 AALIMVHLSRLAEDLILWSSPEFGFIELPDEFSTGSSIMPQKKNPDVLELIRGKAGRVIG 302 Query: 311 ALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT 370 AL LLTIMKGLPLAY++D+QEDKEP+FD+++TL+ + ++ M+ LTVNK+R++EAA Sbjct: 303 ALTGLLTIMKGLPLAYNRDLQEDKEPLFDSVDTLEDSLRVLAGMVSGLTVNKERMREAAE 362 Query: 371 KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSA 430 STATDLAD+LV G+PFREAH I G V AE+ +LA L L LQ ISP+I Sbjct: 363 AGFSTATDLADYLVR-KGVPFREAHEIVGEAVRRAEERGKDLADLSLEELQSISPLIDED 421 Query: 431 VYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQN 468 VY++L E S++ R S GGT EV + + + R+ Sbjct: 422 VYEVLTPEESVAKRNSEGGTAPEEVREAIARAKARLAA 459 |
Length = 459 |
>gnl|CDD|179143 PRK00855, PRK00855, argininosuccinate lyase; Provisional | Back alignment and domain information |
---|
Score = 770 bits (1991), Expect = 0.0 Identities = 266/457 (58%), Positives = 340/457 (74%), Gaps = 1/457 (0%) Query: 11 NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70 N++WGGRFS P ++E+ SI FDK+L E+DI GS H MLAKQGI+S EEA+KI+ Sbjct: 4 NKLWGGRFSEGPDELVERFTASISFDKRLAEEDIAGSIAHARMLAKQGILSEEEAEKILA 63 Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130 GL I EI G F FS +LEDIHM IEARLT IG + GK+HT RSRNDQVA DLRL++ Sbjct: 64 GLDEILEEIEAGKFEFSPELEDIHMAIEARLTERIGDVGGKLHTGRSRNDQVATDLRLYL 123 Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 +++ EI L +L LLD AEEH +TIMPG+THLQ AQPVTFGHH +AY EM RD+ Sbjct: 124 RDEIDEIAELLLELQKALLDLAEEHADTIMPGYTHLQRAQPVTFGHHLLAYAEMLARDLE 183 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 R D+ +R++ PLG+AALAGT+FPIDR TA+ LGF T NS+D+VSDRDF LE LS Sbjct: 184 RLRDARKRVNRSPLGSAALAGTTFPIDRERTAELLGFDGVTENSLDAVSDRDFALEFLSA 243 Query: 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 +++ +H+SRLAEE+ILWS+ +F FV L DAFSTGSSIMPQK+NPD AEL+R KTGR+ G Sbjct: 244 ASLLMVHLSRLAEELILWSSQEFGFVELPDAFSTGSSIMPQKKNPDVAELIRGKTGRVYG 303 Query: 311 ALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT 370 L LLT+MKGLPLAY++D+QEDKEP+FDA++TL++ + A++ M+E LTVNK+R++EAA Sbjct: 304 NLTGLLTVMKGLPLAYNRDLQEDKEPLFDAVDTLKLSLEAMAGMLETLTVNKERMREAAG 363 Query: 371 KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSA 430 K STATDLAD+LV G+PFREAH I G V AE+ +LA L L LQ SP+IT Sbjct: 364 KGFSTATDLADYLVR-KGVPFREAHEIVGKAVREAEERGVDLADLSLEELQAFSPLITED 422 Query: 431 VYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQ 467 VY++L E S+++R S GGT +V +Q+ + R+ Sbjct: 423 VYEVLTPEGSVAARNSIGGTAPEQVREQIARAKARLA 459 |
Length = 459 |
>gnl|CDD|129918 TIGR00838, argH, argininosuccinate lyase | Back alignment and domain information |
---|
Score = 597 bits (1540), Expect = e-171 Identities = 230/448 (51%), Positives = 309/448 (68%), Gaps = 2/448 (0%) Query: 13 MWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGL 72 +WGGRF+ + K N S+ FDK+L E DI GS HT ML K GI++ EEA KIIEGL Sbjct: 1 LWGGRFTGGMDPRVAKFNASLSFDKELAEYDIEGSIAHTKMLKKAGILTEEEAAKIIEGL 60 Query: 73 KVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGS-IAGKMHTARSRNDQVALDLRLWIK 131 ++ E +G F+ D EDIHM IE L +G + GK+HT RSRNDQVA DLRL+++ Sbjct: 61 NELKEEGREGPFILDPDDEDIHMAIERELIDRVGEDLGGKLHTGRSRNDQVATDLRLYLR 120 Query: 132 EKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISR 191 + LE+ L L L++ AE+H T+MPG+THLQ AQP+T HH +AY EM RD R Sbjct: 121 DHVLELAEALLDLQDALIELAEKHVETLMPGYTHLQRAQPITLAHHLLAYAEMLLRDYER 180 Query: 192 FFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHS 251 D+++R++ PLG+ ALAGT FPIDR + A+ LGF T NS+D+VSDRDFILE L + Sbjct: 181 LQDALKRVNVSPLGSGALAGTGFPIDREYLAELLGFDAVTENSLDAVSDRDFILELLFVA 240 Query: 252 AICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGA 311 A+ +H+SR AE++ILWST +F FV L D FS+GSSIMPQK+NPD AEL+R KTGR+ G Sbjct: 241 ALIMVHLSRFAEDLILWSTGEFGFVELPDEFSSGSSIMPQKKNPDVAELIRGKTGRVQGN 300 Query: 312 LLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATK 371 L +L +K LPLAY++D+QEDKEP+FDAL+T+++ + + M++ +TVNK+R++EAA+ Sbjct: 301 LTGMLMTLKALPLAYNRDLQEDKEPLFDALKTVELSLEMATGMLDTITVNKERMEEAASA 360 Query: 372 SHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAV 431 S AT+LAD+LV G+PFREAH+I G V+ A + L +L L LQ+ SP V Sbjct: 361 GFSNATELADYLVRK-GVPFREAHHIVGELVATAIERGKGLEELTLEELQKFSPEFDEDV 419 Query: 432 YDILKVESSISSRKSFGGTCAAEVLKQV 459 Y+ L ESS+ R + GGT EVL+ + Sbjct: 420 YEALDPESSVEKRDAKGGTAPEEVLQAI 447 |
This model describes argininosuccinate lyase, but may include examples of avian delta crystallins, in which argininosuccinate lyase activity may or may not be present and the biological role is to provide the optically clear cellular protein of the eye lens. Length = 455 |
>gnl|CDD|178252 PLN02646, PLN02646, argininosuccinate lyase | Back alignment and domain information |
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Score = 566 bits (1461), Expect = e-162 Identities = 226/467 (48%), Positives = 320/467 (68%), Gaps = 3/467 (0%) Query: 2 SKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIIS 61 + + ++ + ++WGGRF + +EK N SI FDK+L+++DI+GSK H +MLAKQGII+ Sbjct: 7 ASEEEAAKEKKLWGGRFEEGVTPAVEKFNESISFDKRLYKEDIMGSKAHASMLAKQGIIT 66 Query: 62 SEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQ 121 E+ I++GL I EI G F + D ED+HMN EARLT LIG A K+HTARSRNDQ Sbjct: 67 DEDRDSILDGLDEIEKEIEAGKFEWRPDREDVHMNNEARLTELIGEPAKKLHTARSRNDQ 126 Query: 122 VALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAY 181 VA D RLW ++ I +K L L++ AE++ + ++PG+THLQ AQPV H +++ Sbjct: 127 VATDTRLWCRDAIDVIRKRIKTLQVALVELAEKNVDLVVPGYTHLQRAQPVLLSHWLLSH 186 Query: 182 VEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDR 241 VE RD R D R++ CPLG+ ALAGT PIDR TAK+LGF P RNSID+VSDR Sbjct: 187 VEQLERDAGRLVDCRPRVNFCPLGSCALAGTGLPIDRFMTAKDLGFTAPMRNSIDAVSDR 246 Query: 242 DFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELV 301 DF+LE L ++I A+H+SRL EE +LW++ +F FV SDA STGSSIMPQK+NPD ELV Sbjct: 247 DFVLEFLFANSITAIHLSRLGEEWVLWASEEFGFVTPSDAVSTGSSIMPQKKNPDPMELV 306 Query: 302 RAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISA-MIEDLTV 360 R K+ R+ G L+++L + KGLP AY++D+QEDKEP+FD+++T+ +L ++ +++T Sbjct: 307 RGKSARVIGDLVTVLALCKGLPTAYNRDLQEDKEPLFDSVDTV-SDMLEVATEFAQNITF 365 Query: 361 NKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAML 420 N +R++++ AT LAD+LV G+PFRE H+I G V+LAE CEL+ L L L Sbjct: 366 NPERIKKSLPAGMLDATTLADYLV-RKGVPFRETHHIVGAAVALAESKGCELSDLTLEDL 424 Query: 421 QQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQ 467 + I+PV VY++L VE+S+ S+G T + VL+Q+ WR +++ Sbjct: 425 KSINPVFEEDVYEVLGVENSVEKFDSYGSTGSRSVLEQLEKWRTKLE 471 |
Length = 474 |
>gnl|CDD|179883 PRK04833, PRK04833, argininosuccinate lyase; Provisional | Back alignment and domain information |
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Score = 524 bits (1352), Expect = e-149 Identities = 206/446 (46%), Positives = 298/446 (66%), Gaps = 2/446 (0%) Query: 13 MWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGL 72 +WGGRF+ + ++ N S+ FD +L EQDI+GS + L G+++++E Q++ E L Sbjct: 3 LWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTADEQQQLEEAL 62 Query: 73 KVIRAEI-VDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIK 131 + E+ + + + D EDIH +E +L +G + K+HT RSRNDQVA DL+LW K Sbjct: 63 NELLEEVRANPQQILASDAEDIHSWVEGKLIDKVGDLGKKLHTGRSRNDQVATDLKLWCK 122 Query: 132 EKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISR 191 ++ E+ L++L + L++ AE + + +MPG+THLQ AQPVTF H C+AYVEM RD SR Sbjct: 123 DQVAELLTALRQLQSALVETAENNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESR 182 Query: 192 FFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHS 251 D+++RLD PLG+ ALAGT++ IDR A LGF TRNS+DSVSDRD +LE LS + Sbjct: 183 LQDALKRLDVSPLGSGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSDA 242 Query: 252 AICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGA 311 +I +H+SR AE++I +++ + FV LSD ++GSS+MPQK+NPD EL+R K GR+ GA Sbjct: 243 SISMVHLSRFAEDLIFFNSGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGA 302 Query: 312 LLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATK 371 L +L +KGLPLAY+KDMQEDKE +FDAL+T + + +++ + V + R QEAA + Sbjct: 303 LTGMLMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQ 362 Query: 372 SHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAV 431 ++ AT+LAD+LV+ G+PFREAH+I G V A + L LPLA LQ+ S VI V Sbjct: 363 GYANATELADYLVAK-GVPFREAHHIVGEAVVEAIRQGKPLEDLPLAELQKFSSVIGDDV 421 Query: 432 YDILKVESSISSRKSFGGTCAAEVLK 457 Y IL ++S + R + GG +V + Sbjct: 422 YPILSLQSCLDKRAAKGGVSPQQVAQ 447 |
Length = 455 |
>gnl|CDD|36530 KOG1316, KOG1316, KOG1316, Argininosuccinate lyase [Amino acid transport and metabolism] | Back alignment and domain information |
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Score = 503 bits (1296), Expect = e-143 Identities = 210/455 (46%), Positives = 302/455 (66%), Gaps = 2/455 (0%) Query: 12 QMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEG 71 ++WGGRF+ + +MEK N SI +DK+L+E D+ GSK + L K G+I+ E KI++G Sbjct: 7 KLWGGRFTGAVDPLMEKFNASIPYDKRLYEADVDGSKAYAKALEKAGLITEAELDKILKG 66 Query: 72 LKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIK 131 L+ IR E G F + + ED+H E RLT LIG IAGK+HT RSRNDQV DLRLW++ Sbjct: 67 LEKIRREWAAGKFKLNPNDEDVHTANERRLTELIGEIAGKLHTGRSRNDQVVTDLRLWLR 126 Query: 132 EKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISR 191 + I L L+ +L+D+AE + +MPG+THLQ AQPV + H +++ E RD+ R Sbjct: 127 DAIDTILGLLWNLIRVLVDRAEAELDVLMPGYTHLQRAQPVRWSHWLLSHAEQLTRDLGR 186 Query: 192 FFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHS 251 +RL++ PLGA ALAG IDR F A+ELGF NS+D+VSDRDF++E L + Sbjct: 187 LVQIRKRLNQLPLGAGALAGNPLGIDREFLAEELGFEGVIMNSMDAVSDRDFVVEFLFWA 246 Query: 252 AICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGA 311 ++ H+SRLAE++I++ST +F FV LSDA+STGSS+MPQK+NPD EL+R K+GR+ G Sbjct: 247 SMVMTHLSRLAEDLIIYSTKEFGFVTLSDAYSTGSSLMPQKKNPDSLELLRGKSGRVFGD 306 Query: 312 LLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATK 371 L LL +KGLP Y+KD+QEDKEP+FD+ +T+ + + +I LTVN++ +++A T Sbjct: 307 LTGLLMTLKGLPSTYNKDLQEDKEPLFDSSKTVSDSLQVATGVISTLTVNQENMEKALT- 365 Query: 372 SHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAV 431 ATDLA +LV G+PFR+ H+I+G V +AE+ L KL L LQ++SP+ V Sbjct: 366 PDMLATDLAYYLV-RKGVPFRQTHHISGKAVRMAEERGVTLDKLSLEDLQKLSPLFEEDV 424 Query: 432 YDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRI 466 + + E+S+ R + GGT + VL+Q+ + + Sbjct: 425 FCVFNYENSVEKRCAIGGTAKSCVLEQLRQLKKAL 459 |
Length = 464 |
>gnl|CDD|183425 PRK12308, PRK12308, bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional | Back alignment and domain information |
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Score = 492 bits (1268), Expect = e-140 Identities = 209/450 (46%), Positives = 297/450 (66%), Gaps = 6/450 (1%) Query: 13 MWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGL 72 +WGGRFS + ++ N S+ FD +L EQDI+GS + L G++S EE QK+ L Sbjct: 3 LWGGRFSQAADTRFKQFNDSLRFDYRLAEQDIVGSIAWSKALLSVGVLSEEEQQKLELAL 62 Query: 73 KVIRAEIV-DGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIK 131 ++ E++ D + D EDIH +E +L +G + K+HT RSRNDQVA DL+LW + Sbjct: 63 NELKLEVMEDPEQILLSDAEDIHSWVEQQLIGKVGDLGKKLHTGRSRNDQVATDLKLWCR 122 Query: 132 EKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISR 191 ++ ++ L +L +++ AE H T++PG+THLQ AQPVTF H C+AYVEMF RD SR Sbjct: 123 QQGQQLLLALDQLQQQMVNVAERHQGTVLPGYTHLQRAQPVTFAHWCLAYVEMFERDYSR 182 Query: 192 FFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHS 251 D++ RLD CPLG+ ALAGT++PIDR A LGFR TRNS+DSVSDRD ++E +S + Sbjct: 183 LEDALTRLDTCPLGSGALAGTAYPIDREALAHNLGFRRATRNSLDSVSDRDHVMELMSVA 242 Query: 252 AICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGA 311 +I +H+SRLAE++I +++ + F+ L+D ++GSS+MPQK+NPD EL+R KTGR+ GA Sbjct: 243 SISMLHLSRLAEDLIFYNSGESGFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVYGA 302 Query: 312 LLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATK 371 L ++ +K LPLAY+KDMQEDKE +FDAL+T + + + + VN +R EAA + Sbjct: 303 LAGMMMTVKALPLAYNKDMQEDKEGLFDALDTWNDCMEMAALCFDGIKVNGERTLEAAKQ 362 Query: 372 SHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAV 431 ++ AT+LAD+LV+ G+PFREAH+I G V A C L +L L L++ S VI V Sbjct: 363 GYANATELADYLVAK-GIPFREAHHIVGVAVVGAIAKGCALEELSLEQLKEFSDVIEDDV 421 Query: 432 YDILKVESSISSRKSFGGTCAAEVLKQVTY 461 Y IL +ES + R + GG +QV Y Sbjct: 422 YQILTIESCLEKRCALGGVSP----EQVAY 447 |
Length = 614 |
>gnl|CDD|176463 cd01359, Argininosuccinate_lyase, Argininosuccinate lyase (argininosuccinase, ASAL) | Back alignment and domain information |
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Score = 674 bits (1742), Expect = 0.0 Identities = 247/435 (56%), Positives = 317/435 (72%) Query: 32 SIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLE 91 SI FD++LFE+DI GS H MLA+QGI++ EEA KI+ GL IRAEI G+F + E Sbjct: 1 SISFDRRLFEEDIAGSIAHAVMLAEQGILTEEEAAKILAGLAKIRAEIEAGAFELDPEDE 60 Query: 92 DIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDK 151 DIHM IE RL IG + GK+HT RSRNDQVA DLRL++++ LE+ L L LLD+ Sbjct: 61 DIHMAIERRLIERIGDVGGKLHTGRSRNDQVATDLRLYLRDALLELLELLLDLQRALLDR 120 Query: 152 AEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAG 211 AEEH +TIMPG+THLQ AQP+TFGH+ +AY EM RD+ R D+ +R++ PLGA ALAG Sbjct: 121 AEEHADTIMPGYTHLQRAQPITFGHYLLAYAEMLERDLERLADAYKRVNVSPLGAGALAG 180 Query: 212 TSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTP 271 T+FPIDR TA+ LGF PT NS+D+VSDRDF+LE LS +A+ +H+SRLAE++ILWST Sbjct: 181 TTFPIDRERTAELLGFDGPTENSLDAVSDRDFVLEFLSAAALLMVHLSRLAEDLILWSTQ 240 Query: 272 QFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQ 331 +F FV L DA+STGSSIMPQK+NPD EL+R K GR+ GAL LLT +KGLPLAY+KD+Q Sbjct: 241 EFGFVELPDAYSTGSSIMPQKKNPDVLELIRGKAGRVIGALAGLLTTLKGLPLAYNKDLQ 300 Query: 332 EDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPF 391 EDKEP+FDA++TL + ++ +I LTVN +R++EAA STATDLAD+LV G+PF Sbjct: 301 EDKEPLFDAVDTLIASLRLLTGVISTLTVNPERMREAAEAGFSTATDLADYLVREKGVPF 360 Query: 392 REAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTC 451 REAH+I G V LAE+ +L+ L LA LQ ISP+ V + L E+S+ R S+GGT Sbjct: 361 REAHHIVGRAVRLAEEKGKDLSDLTLAELQAISPLFEEDVREALDPENSVERRTSYGGTA 420 Query: 452 AAEVLKQVTYWRNRI 466 AEV +Q+ R + Sbjct: 421 PAEVREQIARARALL 435 |
This group contains ASAL and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASAL is a cytosolic enzyme which catalyzes the reversible breakdown of argininosuccinate to arginine and fumarate during arginine biosynthesis. In ureotelic species ASAL also catalyzes a reaction involved in the production of urea. Included in this group are the major soluble avian eye lens proteins from duck, delta 1 and delta 2 crystallin. Of these two isoforms only delta 2 has retained ASAL activity. These crystallins may have evolved by, gene recruitment of ASAL followed by gene duplication. In humans, mutations in ASAL result in the autosomal recessive disorder argininosuccinic aciduria. Length = 435 |
>gnl|CDD|176461 cd01334, Lyase_I, Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions | Back alignment and domain information |
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Score = 391 bits (1007), Expect = e-109 Identities = 123/325 (37%), Positives = 175/325 (53%), Gaps = 3/325 (0%) Query: 40 FEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEA 99 D+ K H LA+ G++ E A+ I+ L I I M +E Sbjct: 1 IRADLQVEKAHAKALAELGLLPKEAAEAILAALDEILEGIAADQVEQEGSGTHDVMAVEE 60 Query: 100 RLTSLIGSI-AGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNT 158 L G + G +HT RS ND V LRL +++ + LK L+ L KAEEH +T Sbjct: 61 VLAERAGELNGGYVHTGRSSNDIVDTALRLALRDALDILLPALKALIDALAAKAEEHKDT 120 Query: 159 IMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSF--PI 216 +MPG THLQ AQP T GH A+ RD+ R ++++RL+ PLG A+ + PI Sbjct: 121 VMPGRTHLQDAQPTTLGHELAAWAAELERDLERLEEALKRLNVLPLGGGAVGTGANAPPI 180 Query: 217 DRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFV 276 DR A+ LGF P NS +VSDRDF++E LS A+ A+ +S++A ++ L S+ +F V Sbjct: 181 DRERVAELLGFFGPAPNSTQAVSDRDFLVELLSALALLAVSLSKIANDLRLLSSGEFGEV 240 Query: 277 RLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEP 336 L DA GSSIMPQK NP ELVR GR+ G L +LL +KG PL + D ++E Sbjct: 241 ELPDAKQPGSSIMPQKVNPVILELVRGLAGRVIGNLAALLEALKGGPLEDNVDSPVEREA 300 Query: 337 VFDALETLQIIILAISAMIEDLTVN 361 + D+ + L + ++ ++E L VN Sbjct: 301 LPDSFDLLDAALRLLTGVLEGLEVN 325 |
The Lyase class I family contains class II fumarase, aspartase, adenylosuccinate lyase (ASL), argininosuccinate lyase (ASAL), prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. It belongs to the Lyase_I superfamily. Proteins of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Length = 325 |
>gnl|CDD|162114 TIGR00928, purB, adenylosuccinate lyase | Back alignment and domain information |
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Score = 80.5 bits (199), Expect = 8e-16 Identities = 77/326 (23%), Positives = 136/326 (41%), Gaps = 26/326 (7%) Query: 54 LAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLE-DIHMNIEARLTSL---IGSIA 109 LA+ G+I +E ++I +A D +++E +++A + +L G+ Sbjct: 34 LAELGVIPAEAVKEIRA-----KANFTDVDLARIKEIEAVTRHDVKAVVYALKEKCGAEG 88 Query: 110 GKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTA 169 +H + ND V L L +++ I LK+L+ L D A E+ +T+M G TH Q A Sbjct: 89 EFIHFGATSNDIVDTALALLLRDALEIILPKLKQLIDRLKDLAVEYKDTVMLGRTHGQHA 148 Query: 170 QPVTFGHHCMAYVEMFGRDISRFFDSIERLD----ECPLGAAALAGTSFPIDRHFTAKEL 225 +P T G + + R + R + ER+ +G A A + L Sbjct: 149 EPTTLGKKFALWADEMKRQLERLLQAKERIKVGGISGAVGTHAAAYPLVEEVEERVTEFL 208 Query: 226 GFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFST- 284 G + P S RD E L A+ A + + A +I + + + F Sbjct: 209 GLK-PVPISTQIEP-RDRHAELLDALALLATTLEKFAVDI--RLLQRTEHFEVEEPFGKG 264 Query: 285 --GSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQE---DKEPVFD 339 GSS MP KRNP E V I L ++ +PL + +D+ + ++ + D Sbjct: 265 QVGSSAMPHKRNPIDFENVCGLARVIRSVLSPA---LENVPLWHERDLTDSSVERIILPD 321 Query: 340 ALETLQIIILAISAMIEDLTVNKDRL 365 + I++ +++ L VN + + Sbjct: 322 SFILADIMLKTTLKVVKKLVVNPENI 347 |
This family consists of adenylosuccinate lyase, the enzyme that catalyzes step 8 in the purine biosynthesis pathway for de novo synthesis of IMP and also the final reaction in the two-step sequence from IMP to AMP. Length = 435 |
>gnl|CDD|30463 COG0114, FumC, Fumarase [Energy production and conversion] | Back alignment and domain information |
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Score = 70.6 bits (173), Expect = 1e-12 Identities = 85/371 (22%), Positives = 147/371 (39%), Gaps = 68/371 (18%) Query: 58 GIISSEEAQKIIEGLKVIRAEIVDGSF---VF---SRDLEDIHMN--IEARLTSLIGSIA 109 G++ E+A II + A D F V+ S ++++N I R + L+G Sbjct: 62 GLLDPEKADAIIAAADEVLAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGEL 121 Query: 110 GKMHT---------ARSRNDQVALDLRLWIKEKTLEITNDL----KKLLTILLDKAEEHH 156 G ++S ND + + L + N L K L+ L KAEE Sbjct: 122 GSKKPVHPNDHVNMSQSSNDTFPTAMHI---AAVLAVVNRLIPALKHLIKTLAAKAEEFA 178 Query: 157 NTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPI 216 + + G THLQ A P+T G Y + R S+ L E +G A+ GT Sbjct: 179 DVVKIGRTHLQDATPLTLGQEFSGYAAQLEHALERIEASLPHLYELAIGGTAV-GTGLNA 237 Query: 217 DRHFTAK---------ELGFREPTRNSIDSVSDRDFILECLSHSAI--CAMHMSRLAEEI 265 F K L F N ++++ D ++E + A+ A+ + ++A +I Sbjct: 238 HPEFGEKVAEELAELTGLPFV-TAPNKFEALAAHDALVE--ASGALRTLAVSLMKIANDI 294 Query: 266 -ILWSTPQFNFVRLS-DAFSTGSSIMPQKRNPDGAELVRAKTGRI--NGALLSL------ 315 L S P+ + GSSIMP K NP E + ++ N A ++ Sbjct: 295 RWLGSGPRCGLGEIELPENEPGSSIMPGKVNPTQCEALTMVAAQVIGNDAAIAFAGSQGN 354 Query: 316 --LTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAM----IEDLTVNKDRLQEAA 369 L + K P+ ++ L++++++ A+ + I + N++R++E Sbjct: 355 FELNVFK--PVI-----------AYNFLQSVRLLADAMRSFADHCIVGIEPNEERIKELL 401 Query: 370 TKSHSTATDLA 380 +S T L Sbjct: 402 ERSLMLVTALN 412 |
Length = 462 |
>gnl|CDD|184723 PRK14515, PRK14515, aspartate ammonia-lyase; Provisional | Back alignment and domain information |
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Score = 70.4 bits (172), Expect = 1e-12 Identities = 91/353 (25%), Positives = 145/353 (41%), Gaps = 56/353 (15%) Query: 63 EEAQKIIEGL---KVIRAEIVDGSFVFSRDLEDIHMN----IEARLTSLIGSIAGKMH-- 113 E AQ+I++G I I G+ ++MN I R L+G G H Sbjct: 82 EAAQEILDGKWHDHFIVDPIQGGAGT------SMNMNANEVIANRALELLGMEKGDYHYI 135 Query: 114 -------TARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLD----KAEEHHNTIMPG 162 A+S ND + + TL L + + + D KAE+ + I G Sbjct: 136 SPNSHVNMAQSTNDAFPTAIHI----ATLNALEGLLQTMGYMHDVFELKAEQFDHVIKMG 191 Query: 163 FTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTA 222 THLQ A P+ G AY + RD+ R S + L E +GA A+ GT D + Sbjct: 192 RTHLQDAVPIRLGQEFKAYSRVLERDMKRIQQSRQHLYEVNMGATAV-GTGLNADPEYIE 250 Query: 223 KELGFRE-----PTRNS---IDSVSDRDFILECLSHSAICAMHMSRLAEEI-ILWSTPQF 273 + P + +D+ + D E + +C M+MS++A ++ ++ S P+ Sbjct: 251 AVVKHLAAISELPLVGAEDLVDATQNTDAYTEVSAALKVCMMNMSKIANDLRLMASGPRV 310 Query: 274 NFVRLS-DAFSTGSSIMPQKRNPDGAELVRAKTGRI--NGALLSLLTIMKGLPLAYSKDM 330 + A GSSIMP K NP E++ ++ N + L + L L Sbjct: 311 GLAEIMLPARQPGSSIMPGKVNPVMPEVINQIAFQVIGNDHTICLASEAGQLELNV---- 366 Query: 331 QEDKEP--VFDALETLQIIILAISAMIED----LTVNKDRLQEAATKSHSTAT 377 EP VF+ L+++ I+ A ++ + N+DRL+E KS T Sbjct: 367 ---MEPVLVFNLLQSISIMNNGFRAFTDNCLKGIEANEDRLKEYVEKSVGIIT 416 |
Length = 479 |
>gnl|CDD|181000 PRK07492, PRK07492, adenylosuccinate lyase; Provisional | Back alignment and domain information |
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Score = 53.0 bits (128), Expect = 1e-07 Identities = 93/344 (27%), Positives = 138/344 (40%), Gaps = 61/344 (17%) Query: 54 LAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIE--------ARLTSL- 104 A+ G+I E A + I + D F D+ I IE A LT L Sbjct: 34 QAELGVIPKEAA-------ETIWEKGKDAEF----DVARID-EIEAVTKHDVIAFLTHLA 81 Query: 105 --IGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPG 162 +G A +H + +D + L + + + DL ++L L +A EH +T G Sbjct: 82 EFVGPDARFVHQGMTSSDVLDTCLNVQLVRAADLLLADLDRVLAALKKRAFEHKDTPTIG 141 Query: 163 FTHLQTAQPVTFG-HHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPID---R 218 +H A+P TFG Y E F R+ R + E + C + A GT ID Sbjct: 142 RSHGIHAEPTTFGLKLARFYAE-FARNRERLVAAREEIATCAISGA--VGTFANIDPRVE 198 Query: 219 HFTAKELGFR-EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVR 277 AK+LG + EP V RD + + A + RLA EI Q V Sbjct: 199 EHVAKKLGLKPEPVST---QVIPRDRHAMFFATLGVIASSIERLAIEI---RHLQRTEVL 252 Query: 278 -LSDAFST---GSSIMPQKRNP------DG-AELVRAKTGRINGALLSLLTIMKGLPLAY 326 + FS GSS MP KRNP G A LVR+ ++ M+ + L + Sbjct: 253 EAEEFFSPGQKGSSAMPHKRNPVLTENLTGLARLVRS----------YVVPAMENVALWH 302 Query: 327 SKDMQEDK-EPVF--DALETLQIIILAISAMIEDLTVNKDRLQE 367 +D+ E + DA TL + ++ +IE L V + + + Sbjct: 303 ERDISHSSVERMIGPDATITLDFALNRLAGVIEKLVVYPENMLK 346 |
Length = 435 |
>gnl|CDD|143963 pfam00206, Lyase_1, Lyase | Back alignment and domain information |
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Score = 259 bits (663), Expect = 1e-69 Identities = 111/312 (35%), Positives = 149/312 (47%), Gaps = 17/312 (5%) Query: 16 GRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVI 75 GRF+ +M F+ +L E+DI G AK ++ EEA II+ L + Sbjct: 1 GRFTVPADALMGIFTDRSRFNFRLSEEDIKGLAALKKAAAKANVLLKEEAAAIIKALDEV 60 Query: 76 RAEI-VDGSFVFSRDLEDIHMNIEARLTSLIGSI-------AGKMHTARSRNDQVALDLR 127 E D +FV E + L +IG + K+HT +S NDQV LR Sbjct: 61 AEEGKADDAFVLKVIQEGSGTAVNMNLNEVIGELLGQLVHPNDKVHTGQSSNDQVPTALR 120 Query: 128 LWIKEKTLE-ITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFG 186 L +K E + L +L+ L +KA+E + + PG THLQ A PVT G Y Sbjct: 121 LALKLALSEVLLPALGQLIDALKEKAKEFADVVKPGRTHLQDATPVTLGQELSGYAVALT 180 Query: 187 RDISRFFDSIERLDECPLGAAALAGTSFPIDRHFT---AKEL----GFREPTRNSIDSVS 239 RD+ R + R+ PLG GT D F AKEL G P NS ++ S Sbjct: 181 RDLERLKQLLPRILVEPLGGGTAVGTGLNADPEFAELLAKELGFFTGLPVPAPNSFEATS 240 Query: 240 DRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFST-GSSIMPQKRNPDGA 298 DRD ++E A+ A H+S+ A ++ L S+ F FV LS A GSSIMP K NPD Sbjct: 241 DRDAVVEFSGALALLATHLSKFANDLRLLSSGPFGFVELSLAEGEPGSSIMPGKVNPDQL 300 Query: 299 ELVRAKTGRING 310 EL+R K GR+ G Sbjct: 301 ELLRGKAGRVFG 312 |
Length = 312 |
>gnl|CDD|167327 PRK02186, PRK02186, argininosuccinate lyase; Provisional | Back alignment and domain information |
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Score = 218 bits (557), Expect = 2e-57 Identities = 116/364 (31%), Positives = 185/364 (50%), Gaps = 15/364 (4%) Query: 48 KVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLED------IHMNIEARL 101 + H ML GI++ E A+ +++ + +R D F L ++M EA L Sbjct: 446 EAHLVMLGDTGIVAPERARPLLDAHRRLR----DAGFA---PLLARPAPRGLYMLYEAYL 498 Query: 102 TSLIG-SIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIM 160 +G + G + TARSRND A +L ++E T + L +L L+ KA + + + Sbjct: 499 IERLGEDVGGVLQTARSRNDINATTTKLHLREATSRAFDALWRLRRALVFKASANVDCAL 558 Query: 161 PGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHF 220 P ++ Q A P + GH+ +A R+ F E +D CPLGA A GT+FPID F Sbjct: 559 PIYSQYQPALPGSLGHYLLAVDGALARETHALFALFEHIDVCPLGAGAGGGTTFPIDPEF 618 Query: 221 TAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSD 280 A+ LGF +P NS+D+V+ RD +L LS A + +SRLA+++ LW+T +F V L D Sbjct: 619 VARLLGFEQPAPNSLDAVASRDGVLHFLSAMAAISTVLSRLAQDLQLWTTREFALVSLPD 678 Query: 281 AFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDM-QEDKEPVFD 339 A + GSS++PQK+NP E V+ + G + GAL S + P + S + P+ Sbjct: 679 ALTGGSSMLPQKKNPFLLEFVKGRAGVVAGALASASAALGKTPFSNSFEAGSPMNGPIAQ 738 Query: 340 ALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITG 399 A ++ + +I+ L ++ R++ +AT +A+ LV + FR AH G Sbjct: 739 ACAAIEDAAAVLVLLIDGLEADQARMRAHLEDGGVSATAVAESLVVRRSISFRSAHTQVG 798 Query: 400 CTVS 403 + Sbjct: 799 QAIR 802 |
Length = 887 |
>gnl|CDD|102352 PRK06389, PRK06389, argininosuccinate lyase; Provisional | Back alignment and domain information |
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Score = 120 bits (303), Expect = 7e-28 Identities = 90/369 (24%), Positives = 169/369 (45%), Gaps = 15/369 (4%) Query: 29 INVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSR 88 + ID DK L + +I+ + LA++ +I+ + + +I L +I Sbjct: 21 VKDDIDADKNLIKYEIINLLAYHVALAQRRLITEKAPKCVINAL----IDIYKNGIEIDL 76 Query: 89 DLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTIL 148 DLED+H IE + G + SRN+QV DL L+I +K +EI L +++ ++ Sbjct: 77 DLEDVHTAIENFVIRRCGDMFKNFRLFLSRNEQVHADLNLFIIDKIIEIEKILYEIIKVI 136 Query: 149 LDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVE-MFGRDISRFFDSIERLDECPLGAA 207 + +PG+TH + A P+T + + Y++ + I+ + L E P G Sbjct: 137 PGFNLK---GRLPGYTHFRQAMPMTVNTY-INYIKSILYHHINNLDSFLMDLREMPYGYG 192 Query: 208 ALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHS-AICAMHMSRLAEEII 266 + G+ + + ++ LG + +N + S S +E +S+ + A+ +SR+ ++II Sbjct: 193 SGYGSPSSVKFNQMSELLGMEKNIKNPVYSSSLYIKTIENISYLISSLAVDLSRICQDII 252 Query: 267 LWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAY 326 ++ + + D F+TGSS+MP KRNPD EL + L + Y Sbjct: 253 IYYEN--GIITIPDEFTTGSSLMPNKRNPDYLELFQGIAAESISVLSFIAQSELNKTTGY 310 Query: 327 SKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSH 386 +D Q K+ + + I+L + ++ ++ + E K+ AT A WL Sbjct: 311 HRDFQIVKDSTISFINNFERILLGLPDLLYNIKF--EITNEKNIKNSVYATYNA-WLAFK 367 Query: 387 AGLPFREAH 395 G+ ++ A+ Sbjct: 368 NGMDWKSAY 376 |
Length = 434 |
>gnl|CDD|30365 COG0015, PurB, Adenylosuccinate lyase [Nucleotide transport and metabolism] | Back alignment and domain information |
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Score = 109 bits (273), Expect = 2e-24 Identities = 91/372 (24%), Positives = 151/372 (40%), Gaps = 27/372 (7%) Query: 54 LAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIH--MNIEARLTSLIGSIAGK 111 A+ G+I +E A +I D + + E H + L +G A + Sbjct: 34 QAELGVIPAEAAAEID---AAAAFAEFDLERIKEIEAETGHDVKALVRALAEKVGEEASE 90 Query: 112 -MHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQ 170 +H + D + L L +KE I DLK+L+ L + A EH +T M G TH Q A+ Sbjct: 91 YVHFGATSQDIIDTALALQLKEALDLILPDLKRLIEALAELALEHKDTPMLGRTHGQPAE 150 Query: 171 PVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFP----IDRHFTAKELG 226 P TFG ++ R + R ++ ER+ +G A + A++LG Sbjct: 151 PTTFGKKFANWLAELLRHLERLEEAEERIIVGKIGGAVGTLAALGDLGAEVEERVAEKLG 210 Query: 227 FREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEI-ILWSTPQFNFVRLSDAFSTG 285 + ++ VS RD I E S A+ A + + A +I +L T G Sbjct: 211 LKPAPIST--QVSPRDRIAEFFSALALLAGSLEKFARDIRLLQRTEVGEVEEPFAKGQVG 268 Query: 286 SSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQE---DKEPVFDALE 342 SS MP KRNP +E V + +LL + L + +D+ + ++ + DA Sbjct: 269 SSAMPHKRNPIDSENVTGLARVARALVSTLLENL---VLWHERDLTDSSVERVILPDAFI 325 Query: 343 TLQIIILAISAMIEDLTVNKDRLQE--AATKS--HSTATDLADWLVSHAGLPFREAHYIT 398 + + ++E L VN +R++ T S LA + G+ EAH + Sbjct: 326 AADGALNRLLNVLEGLEVNPERMRRNLDLTLGLIASERVMLA---LRKKGMGREEAHELV 382 Query: 399 -GCTVSLAEKNQ 409 + E+ + Sbjct: 383 REKAMKAWEQGK 394 |
Length = 438 |
>gnl|CDD|180551 PRK06390, PRK06390, adenylosuccinate lyase; Provisional | Back alignment and domain information |
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Score = 54.5 bits (131), Expect = 5e-08 Identities = 80/380 (21%), Positives = 155/380 (40%), Gaps = 46/380 (12%) Query: 55 AKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLED-IHMNIEA---RLTSLIGSIAG 110 + GII + I + + V V R++E I ++ A L+ + Sbjct: 40 YEYGIIPRDAFLDI---KNAVDSNSVRLERV--REIESEIKHDVMALVEALSEQCSAGKN 94 Query: 111 KMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQ 170 +H + ND L I + I +D+K L+ L+ +E+ ++ M G TH Q A Sbjct: 95 YVHFGVTSNDINDTATALQIHDFVSIIKDDIKNLMETLIKLIDEYKDSPMMGRTHGQHAS 154 Query: 171 PVTFGHHCMAYVEMFGRDISRFFDSIERLDE----CPLG-AAALAGTSFPIDRHFTAKEL 225 P+TFG Y++ R + R + +R P+G AAL + I + L Sbjct: 155 PITFGLKFAVYLDEMSRHLDRLTEMGDRAFAGKVLGPVGTGAALGKDALDIQNR-VMEIL 213 Query: 226 GFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAF--- 282 G ++ + +RD +E LS ++ + ++A EI P+ + +S+ F Sbjct: 214 GIYSEIGST--QIVNRDRYIEYLSVINGISVTLEKIATEIRNLQRPEID--EVSEYFDEE 269 Query: 283 -STGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGL--PLAYSKDMQEDKEPVFD 339 GSS MP K NP +E V +SL ++ L P + +++ Sbjct: 270 SQVGSSSMPSKVNPINSENV-----------VSLSRFIRSLIIPEYEAGVTWHERDLTNS 318 Query: 340 ALETLQI---------IILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLP 390 ALE I ++ ++ ++ L + +D ++ S ++ ++ +G+P Sbjct: 319 ALERFTIPYASILIDYVLYNMNDVLSHLIIKEDEIRRNLESDDSIMSESIVRALTLSGMP 378 Query: 391 FREAH-YITGCTVSLAEKNQ 409 ++AH ++ ++ + Sbjct: 379 RQDAHEFVRRASMEARSNGK 398 |
Length = 451 |
>gnl|CDD|180664 PRK06705, PRK06705, argininosuccinate lyase; Provisional | Back alignment and domain information |
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Score = 196 bits (500), Expect = 9e-51 Identities = 126/429 (29%), Positives = 213/429 (49%), Gaps = 9/429 (2%) Query: 48 KVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGS 107 K H ML ++ ++ EEA+ I+ LK + EI + +++ ED+ +E ++ S Sbjct: 46 KAHIVMLTEENLMKKEEAKFILHALKKV-EEIPEEQLLYTEQHEDLFFLVEHLISQEAKS 104 Query: 108 -IAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHL 166 MH RSRND R+ ++ L + L +L A +H TIMP +TH Sbjct: 105 DFVSNMHIGRSRNDMGVTMYRMSLRRYVLRLMEHHLLLQESILQLAADHKETIMPAYTHT 164 Query: 167 QTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELG 226 Q AQP TFGH+ +A + RD+ R + + L++ P+GAAAL+ TSFPI R A LG Sbjct: 165 QPAQPTTFGHYTLAIYDTMQRDLERMKKTYKLLNQSPMGAAALSTTSFPIKRERVADLLG 224 Query: 227 FREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGS 286 F NS D+V+ D++LE S + + SR + +L +T +++ + ++ + S Sbjct: 225 FTNVIENSYDAVAGADYLLEVSSLLMVMMTNTSRWIHDFLLLATKEYDGITVARPYVQIS 284 Query: 287 SIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEP-VFDALETLQ 345 SIMPQKRNP E RA T G ++ ++ P D ++D +P ++ +E Sbjct: 285 SIMPQKRNPVSIEHARAITSSALGEAFTVFQMIHNTPFGDIVDTEDDLQPYLYKGIEKAI 344 Query: 346 IIILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLA 405 + ++A+I + V +D L+ + K T TD AD L + G+PFR AH+ +++ Sbjct: 345 RVFCIMNAVIRTMKVEEDTLKRRSYKHAITITDFADVLTKNYGIPFRHAHHAASVIANMS 404 Query: 406 EKNQCELAKLPLA----MLQQISPV--ITSAVYDILKVESSISSRKSFGGTCAAEVLKQV 459 + + EL +L LQ+ + + +I+ E+ I R +GG E+ + + Sbjct: 405 LEQKKELHELCFKDVNIYLQEKFKIQLLEKEWEEIISPEAFIQKRNVYGGPSKKEMERMI 464 Query: 460 TYWRNRIQN 468 + + Sbjct: 465 NNRKELFRK 473 |
Length = 502 |
>gnl|CDD|176466 cd01594, Lyase_I_like, Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions | Back alignment and domain information |
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Score = 196 bits (501), Expect = 1e-50 Identities = 81/257 (31%), Positives = 117/257 (45%), Gaps = 54/257 (21%) Query: 95 MNIEARLTSLIGSIAGKMH------TARSRNDQVALDLRLWIKEKTLEITNDLKKLLTIL 148 +E L G +AG +H RS ND LRL +++ ++ LK L+ L Sbjct: 14 ALVEEVLAGRAGELAGGLHGSALVHKGRSSNDIGTTALRLALRDALDDLLPLLKALIDAL 73 Query: 149 LDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAA 208 KAE H T+MPG THLQ AQPVT G+ A+ ++ GRD +ERL+E Sbjct: 74 ALKAEAHKGTVMPGRTHLQDAQPVTLGYELRAWAQVLGRD-------LERLEEA------ 120 Query: 209 LAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILW 268 + E L A+ A H+S++AE++ L Sbjct: 121 ----------------------------------AVAEALDALALAAAHLSKIAEDLRLL 146 Query: 269 STPQFNFVRLSDA-FSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYS 327 + +F + GSSIMPQK NP AELVR G + G L+++LT +KG P + Sbjct: 147 LSGEFGELGEPFLPGQPGSSIMPQKVNPVAAELVRGLAGLVIGNLVAVLTALKGGPERDN 206 Query: 328 KDMQEDKEPVFDALETL 344 +D +E + D+L L Sbjct: 207 EDSPSMREILADSLLLL 223 |
Lyase class I_like superfamily of enzymes that catalyze beta-elimination reactions and are active as homotetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. This superfamily contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase. The lyase class I family comprises proteins similar to class II fumarase, aspartase, adenylosuccinate lyase, argininosuccinate lyase, and 3-carboxy-cis, cis-muconate lactonizing enzyme which, for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. Histidine or phenylalanine ammonia-lyase catalyze a beta-elimination of ammonia from histidine and phenylalanine, respectively. Length = 231 |
>gnl|CDD|162853 TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-muconate cycloisomerase | Back alignment and domain information |
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Score = 69.4 bits (170), Expect = 2e-12 Identities = 64/230 (27%), Positives = 92/230 (40%), Gaps = 18/230 (7%) Query: 99 ARLTSLIGSIAGK-MHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHN 157 L + A + +H + D + L L +++ + DL +L L D A H + Sbjct: 79 KALRKAVAGEAARYVHRGATSQDVIDTSLMLQLRDALDLLLADLGRLADALADLAARHRD 138 Query: 158 TIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAA--LAGT--- 212 T M G T LQ A P TFG ++ R R R G AA LA Sbjct: 139 TPMTGRTLLQQAVPTTFGLKAAGWLAAVLRARDRLAALRTRALPLQFGGAAGTLAALGTR 198 Query: 213 SFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQ 272 + A LG P ++ + RD I E S A+ A + ++A +I L S Sbjct: 199 GGAV-AAALAARLGLPLP---ALPWHTQRDRIAEFGSALALVAGALGKIAGDIALLSQ-- 252 Query: 273 FNFVRLSDAFST---GSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIM 319 + + F GSS MP KRNP GA L+ A R+ G +L + Sbjct: 253 ---TEVGEVFEAGGGGSSAMPHKRNPVGAALLAAAARRVPGLAATLHAAL 299 |
Members of this family are 3-carboxy-cis,cis-muconate cycloisomerase, the enzyme the catalyzes the second step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. Length = 338 |
>gnl|CDD|176467 cd01595, Adenylsuccinate_lyase_like, Adenylsuccinate lyase (ASL)_like | Back alignment and domain information |
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Score = 105 bits (264), Expect = 3e-23 Identities = 75/286 (26%), Positives = 111/286 (38%), Gaps = 37/286 (12%) Query: 54 LAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEAR-----------LT 102 A+ G+I E A++I D VF D E I IE L Sbjct: 25 QAELGLIPKEAAEEI--------RAAAD---VFEIDAERIA-EIEKETGHDVIAFVYALA 72 Query: 103 SLIGSIAGK-MHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMP 161 G AG+ +H + D L L +++ I DL L+ L A EH +T M Sbjct: 73 EKCGEDAGEYVHFGATSQDINDTALALQLRDALDIILPDLDALIDALAKLALEHKDTPML 132 Query: 162 GFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGA-------AALAGTSF 214 G TH Q A P TFG + R + R ++ ER+ G A+L Sbjct: 133 GRTHGQHALPTTFGKKFAVWAAELLRHLERLEEARERV--LVGGISGAVGTHASLGPKGP 190 Query: 215 PIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFN 274 ++ A++LG + P + + RD I E LS A+ A + ++A +I L + Sbjct: 191 EVEERV-AEKLGLKVPPITT--QIEPRDRIAELLSALALIAGTLEKIATDIRLLQRTEIG 247 Query: 275 FVRL-SDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIM 319 V + GSS MP KRNP +E + + L + Sbjct: 248 EVEEPFEKGQVGSSTMPHKRNPIDSENIEGLARLVRALAAPALENL 293 |
This group contains ASL, prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). pCMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone, in the beta-ketoadipate pathway. ASL deficiency has been linked to several pathologies including psychomotor retardation with autistic features, epilepsy and muscle wasting. Length = 381 |
>gnl|CDD|176464 cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1 | Back alignment and domain information |
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Score = 78.7 bits (195), Expect = 3e-15 Identities = 75/255 (29%), Positives = 116/255 (45%), Gaps = 22/255 (8%) Query: 54 LAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLED-IHMNIEARLTSL---IGSIA 109 AK G+I +E A++I + K E V ++E ++ A +T++ G Sbjct: 31 WAKLGVIPAEAAEEIRKKAK-FDVERVK-------EIEAETKHDVIAFVTAIAEYCGEAG 82 Query: 110 GKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTA 169 +H + +D V L L ++E I DLK+LL +L KA EH +T+M G TH A Sbjct: 83 RYIHFGLTSSDVVDTALALQLREALDIILKDLKELLEVLKKKALEHKDTVMVGRTHGIHA 142 Query: 170 QPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPID-RHFTAKELGFR 228 +P TFG + F R + R ++ ER+ + A + + A++LG + Sbjct: 143 EPTTFGLKFALWYAEFKRHLERLKEARERILVGKISGAVGTYANLGPEVEERVAEKLGLK 202 Query: 229 -EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFS---T 284 EP V RD E LS A+ A + ++A EI + + + FS Sbjct: 203 PEPIST---QVIQRDRHAEYLSTLALIASTLEKIATEIRHLQRTEVL--EVEEPFSKGQK 257 Query: 285 GSSIMPQKRNPDGAE 299 GSS MP KRNP +E Sbjct: 258 GSSAMPHKRNPILSE 272 |
This subgroup contains bacterial and archeal proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). Length = 387 |
>gnl|CDD|181463 PRK08540, PRK08540, adenylosuccinate lyase; Reviewed | Back alignment and domain information |
---|
Score = 66.5 bits (163), Expect = 1e-11 Identities = 77/269 (28%), Positives = 117/269 (43%), Gaps = 39/269 (14%) Query: 54 LAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLED-IHMNIEA---RLTSLIGSIA 109 A+ G+I E A++I +A +++E IH +I A L+ + A Sbjct: 39 EAELGLIPEEAAEEINR-----KASTKYVKLERVKEIEAEIHHDIMAVVKALSEVCEGDA 93 Query: 110 GK-MHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQT 168 G+ +H + ND + L +K+ + LKKL +LL KAEEH NT+ G TH Q Sbjct: 94 GEYVHFGATSNDIIDTATALQLKDSLEILEEKLKKLRGVLLKKAEEHKNTVCIGRTHGQH 153 Query: 169 AQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECP--------LGA----AALAGTSFPI 216 A P T+G M + ++ +I R +ERL++ GA AA I Sbjct: 154 AVPTTYG---MRFA-IWASEIQR---HLERLEQLKPRVCVGQMTGAVGTQAAFGEKGIEI 206 Query: 217 DRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEI-ILWSTPQFNF 275 + + LG + P S + V RD E + A A + ++ EI L T Sbjct: 207 QKR-VMEILGLK-PVLIS-NQVIQRDRHAEFMMFLANIATTLDKIGLEIRNLQRT---EI 260 Query: 276 VRLSDAFS---TGSSIMPQKRNPDGAELV 301 + + F GSS MP KRNP +E + Sbjct: 261 GEVEEEFGKKQVGSSTMPHKRNPITSEQI 289 |
Length = 449 |
>gnl|CDD|181437 PRK08470, PRK08470, adenylosuccinate lyase; Provisional | Back alignment and domain information |
---|
Score = 52.5 bits (126), Expect = 3e-07 Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 28/252 (11%) Query: 56 KQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGK---M 112 K G+I + +KI + K A I + DL A LTS+ S+ + + Sbjct: 36 KLGLIPDSDCEKICKNAKFDIARIDEIEKTTKHDLI-------AFLTSVSESLGEESRFV 88 Query: 113 HTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPV 172 H + +D + + L +++ I D+K L+ + +A EH +T+M G +H +P+ Sbjct: 89 HYGMTSSDCIDTAVALQMRDSLKLIIEDVKNLMEAIKKRALEHKDTLMVGRSHGIHGEPI 148 Query: 173 TFGHHCMAYVEMFGRDISRFFDSIER-LDECPLGAAALAGTSF---PID-RHFTAKELGF 227 TFG + ++ +I R ++E ++ +G + A +F P++ +ELG Sbjct: 149 TFG----LVLAIWYDEIKRHLKALEHTMEVISVGKISGAMGNFAHAPLELEELVCEELGL 204 Query: 228 R-EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFST-- 284 + P N V RD S A+ A ++A I + + FS Sbjct: 205 KPAPVSN---QVIQRDRYARLASALALLASSCEKIAVAIRHLQRTE--VYEAEEYFSKGQ 259 Query: 285 -GSSIMPQKRNP 295 GSS MP KRNP Sbjct: 260 KGSSAMPHKRNP 271 |
Length = 442 |
>gnl|CDD|183992 PRK13353, PRK13353, aspartate ammonia-lyase; Provisional | Back alignment and domain information |
---|
Score = 95.8 bits (239), Expect = 2e-20 Identities = 79/288 (27%), Positives = 121/288 (42%), Gaps = 34/288 (11%) Query: 115 ARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTF 174 A+S ND +R+ + + L + +KA E + I G T LQ A P+T Sbjct: 138 AQSTNDVFPTAIRIAALNLLEGLLAAMGALQDVFEEKAAEFDHVIKMGRTQLQDAVPITL 197 Query: 175 GHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHF---TAKELGFREPT 231 G AY RD R + E L E LG A+ GT D + K L T Sbjct: 198 GQEFSAYARALKRDRKRIQQAREHLYEVNLGGTAV-GTGLNADPEYIERVVKHL--AAIT 254 Query: 232 R-------NSIDSVSDRDFILECLSHSAICAMHMSRLAEEI-ILWSTPQ--FNFVRLSDA 281 + +D+ + D +E +CA+++S++A ++ +L S P+ + L A Sbjct: 255 GLPLVGAEDLVDATQNTDAFVEVSGALKVCAVNLSKIANDLRLLSSGPRTGLGEINLP-A 313 Query: 282 FSTGSSIMPQKRNPDGAELVRAKTGRI--NGALLSLLTIMKGLPL-AYSKDMQEDKEPV- 337 GSSIMP K NP E+V ++ N ++L L L EPV Sbjct: 314 VQPGSSIMPGKVNPVMPEVVNQIAFQVIGNDVTITLAAEAGQLELNVM--------EPVI 365 Query: 338 -FDALETLQIIILAISAMIE----DLTVNKDRLQEAATKSHSTATDLA 380 F+ LE++ I+ A A + + N++R +E KS AT L Sbjct: 366 AFNLLESISILTNACRAFTDNCVKGIEANEERCKEYVEKSVGIATALN 413 |
Length = 473 |
>gnl|CDD|176469 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like | Back alignment and domain information |
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Score = 95.0 bits (237), Expect = 4e-20 Identities = 77/271 (28%), Positives = 107/271 (39%), Gaps = 48/271 (17%) Query: 128 LWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGR 187 L +++ + DL LL L A H +T M G THLQ A P+TFG ++ R Sbjct: 109 LQLRDALDLLERDLDALLDALARLAATHRDTPMVGRTHLQHALPITFGLKVAVWLSELLR 168 Query: 188 DISRFFDSIERLDECPL--------GA----AALAGTSFPIDRHFTAKELGFREPTRNSI 235 ERLDE GA A+L + A ELG P I Sbjct: 169 H-------RERLDELRPRVLVVQFGGAAGTLASLGDQGLAVQEAL-AAELGLGVPA---I 217 Query: 236 DSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTG-SSIMPQKRN 294 + RD I E S A+ + ++A ++ L + V A G SS MP KRN Sbjct: 218 PWHTARDRIAELASFLALLTGTLGKIARDVYLLMQTEIGEVAEPFAKGRGGSSTMPHKRN 277 Query: 295 PDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPV------FDALETLQIII 348 P G EL+ A R+ G LL M QE + + AL +I + Sbjct: 278 PVGCELIVALARRVPGLAALLLDAMV----------QEHERDAGAWHAEWIALP--EIFL 325 Query: 349 LAISA------MIEDLTVNKDRLQEAATKSH 373 LA A ++ L VN+DR++ + Sbjct: 326 LASGALEQAEFLLSGLEVNEDRMRANLDLTG 356 |
This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms. Length = 437 |
>gnl|CDD|31230 COG1027, AspA, Aspartate ammonia-lyase [Amino acid transport and metabolism] | Back alignment and domain information |
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Score = 85.3 bits (211), Expect = 3e-17 Identities = 69/292 (23%), Positives = 120/292 (41%), Gaps = 26/292 (8%) Query: 115 ARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTF 174 ++S ND R+ + + ++ + L+ L+ KA+E + + G T LQ A P+T Sbjct: 139 SQSTNDAYPTAFRIAVYKSLRKLIDALEDLIEAFERKAKEFADILKMGRTQLQDAVPMTL 198 Query: 175 GHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAK---------EL 225 G A+ DI R + + E L E LG A+ GT + + L Sbjct: 199 GQEFGAFAVALKEDIKRIYRAAELLLEVNLGGTAI-GTGINAPKGYIELVVKKLAEVTGL 257 Query: 226 GFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEI-ILWSTPQ--FNFVRLSDAF 282 P N I++ D + A+ +S++ ++ +L S P+ N + L A Sbjct: 258 PLV-PAENLIEATQDTGAFVMVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLP-AV 315 Query: 283 STGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPV--FDA 340 GSSIMP K NP E+V ++ G ++ + L + EPV + Sbjct: 316 QAGSSIMPGKVNPVIPEVVNQVCFKVIGNDTTITMAAEAGQLQLNV-----MEPVIAYAL 370 Query: 341 LETLQIIILAISAM----IEDLTVNKDRLQEAATKSHSTATDLADWLVSHAG 388 E++ I+ A + I+ +T N++R +E S T L ++ Sbjct: 371 FESISILTNACRNLREKCIDGITANEERCEEYVENSIGIVTALNPYIGYENA 422 |
Length = 471 |
>gnl|CDD|176462 cd01357, Aspartase, Aspartase | Back alignment and domain information |
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Score = 84.9 bits (211), Expect = 5e-17 Identities = 77/296 (26%), Positives = 123/296 (41%), Gaps = 50/296 (16%) Query: 115 ARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTF 174 ++S ND LRL + ++ + L L KA E + + G T LQ A P+T Sbjct: 133 SQSTNDVYPTALRLALILLLRKLLDALAALQEAFQAKAREFADVLKMGRTQLQDAVPMTL 192 Query: 175 GHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAK---------EL 225 G AY RD +R + + ERL E LG A+ GT + L Sbjct: 193 GQEFGAYATALKRDRARIYKARERLREVNLGGTAI-GTGINAPPGYIELVVEKLSEITGL 251 Query: 226 GFREPTRNSIDSVSDRDFILECLSHSAI--CAMHMSRLAEEI-ILWSTPQ--FNFVRLSD 280 + N ID+ + D +E A+ A+ +S++A ++ +L S P+ + L Sbjct: 252 PLK-RAENLIDATQNTDAFVEV--SGALKRLAVKLSKIANDLRLLSSGPRAGLGEINLP- 307 Query: 281 AFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSL----------LTIMKGLPLAYSKDM 330 A GSSIMP K NP E+V ++ G L++ L + Sbjct: 308 AVQPGSSIMPGKVNPVIPEVVNQVAFQVIGNDLTITMAAEAGQLELNVF----------- 356 Query: 331 QEDKEPV--FDALETLQIIILAISAM----IEDLTVNKDRLQEAATKSHSTATDLA 380 EPV ++ LE++ I+ A+ + I+ +T N++R +E S T L Sbjct: 357 ----EPVIAYNLLESIDILTNAVRTLRERCIDGITANEERCREYVENSIGIVTALN 408 |
This subgroup contains Escherichia coli aspartase (L-aspartate ammonia-lyase), Bacillus aspartase and related proteins. It is a member of the Lyase class I family, which includes both aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Length = 450 |
>gnl|CDD|162062 TIGR00839, aspA, aspartate ammonia-lyase | Back alignment and domain information |
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Score = 76.4 bits (188), Expect = 1e-14 Identities = 66/290 (22%), Positives = 118/290 (40%), Gaps = 22/290 (7%) Query: 115 ARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTF 174 ++S ND R+ + +++ + + +L KA+E + + G T LQ A P+T Sbjct: 136 SQSTNDAYPTGFRIAVYSSLIKLVDAINQLRDGFEQKAKEFADILKMGRTQLQDAVPMTL 195 Query: 175 GHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFT-------AKELGF 227 G A+ + ++ + E L E LGA A+ GT ++ A+ G Sbjct: 196 GQEFEAFSILLEEEVKNIKRTAELLLEVNLGATAI-GTGLNTPPEYSPLVVKKLAEVTGL 254 Query: 228 R-EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEI-ILWSTPQFNFVRLS-DAFST 284 P N I++ SD + A+ MS++ ++ +L S P+ ++ Sbjct: 255 PCVPAENLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQA 314 Query: 285 GSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPV--FDALE 342 GSSIMP K NP E+V ++ G ++ + L + EPV E Sbjct: 315 GSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTLAAEAGQLQLNV-----MEPVIGQAMFE 369 Query: 343 TLQIIILAISAM----IEDLTVNKDRLQEAATKSHSTATDLADWLVSHAG 388 ++ I+ A + + +T NK+ + S T L ++ H G Sbjct: 370 SIHILTNACYNLTDKCVNGITANKEICEGYVFNSIGIVTYLNPFIGHHNG 419 |
Fumarate hydratase scores as high as 570 bits against this model. Length = 468 |
>gnl|CDD|37911 KOG2700, KOG2700, KOG2700, Adenylosuccinate lyase [Nucleotide transport and metabolism] | Back alignment and domain information |
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Score = 58.8 bits (142), Expect = 3e-09 Identities = 60/276 (21%), Positives = 95/276 (34%), Gaps = 21/276 (7%) Query: 136 EITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDS 195 I L ++ L A+++ G THLQ AQ TFG +++ RD+ RF + Sbjct: 127 LILPYLAGVIDRLSQFADKYKEKPTLGRTHLQPAQLTTFGKRMCLWIQELLRDLERFHRA 186 Query: 196 IERLDECPLGAAALAGTSFP-----------IDRHFTAKELGFREPTRNSIDSVSDRDFI 244 + L A SF KELGF + R Sbjct: 187 RTDVRFRGLKGATGTQASFLSLFLGDMDKVEKLDSLVTKELGFVPMYIVT-GQTYSRKTD 245 Query: 245 LECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFS---TGSSIMPQKRNPDGAELV 301 E ++ A + A +I L + F + + F GSS MP KRNP E + Sbjct: 246 AEEVAPLASLGATAHKYATDIRLLA----KFAEVEEPFEAHQIGSSAMPYKRNPMRCERI 301 Query: 302 RAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVF-DALETLQIIILAISAMIEDLTV 360 + + + L + D ++ V DA T + + ++E L V Sbjct: 302 TSLARHLRPYVTQALNTASVQWHERTLDDSANRRIVLPDAFLTADGNLGTLLNILEGLVV 361 Query: 361 NKDRLQEAATKSH-STATDLADWLVSHAGLPFREAH 395 ++ + + AGL +EAH Sbjct: 362 YPKVIERNIRDELPFMVLENIIMALVKAGLSRQEAH 397 |
Length = 481 |
>gnl|CDD|176468 cd01596, Aspartase_like, aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes | Back alignment and domain information |
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Score = 80.2 bits (199), Expect = 1e-15 Identities = 59/188 (31%), Positives = 86/188 (45%), Gaps = 22/188 (11%) Query: 128 LWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGR 187 L + E+ L L++L L KAEE + + G THLQ A P+T G Y R Sbjct: 149 LALLERLLP---ALEQLQDALDAKAEEFADIVKIGRTHLQDAVPLTLGQEFSGYAAQLAR 205 Query: 188 DISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAK---------ELGFREPTRNSIDSV 238 DI+R ++ERL E LG A+ GT + K L F N ++ Sbjct: 206 DIARIEAALERLRELNLGGTAV-GTGLNAPPGYAEKVAAELAELTGLPFV-TAPNLFEAT 263 Query: 239 SDRDFILECLSHSAI--CAMHMSRLAEEI-ILWSTPQ--FNFVRLSDAFSTGSSIMPQKR 293 + D ++E A+ A+ +S++A ++ +L S P+ + L A GSSIMP K Sbjct: 264 AAHDALVEV--SGALKTLAVSLSKIANDLRLLSSGPRAGLGEINL-PANQPGSSIMPGKV 320 Query: 294 NPDGAELV 301 NP E V Sbjct: 321 NPVIPEAV 328 |
This group contains aspartase (L-aspartate ammonia-lyase), fumarase class II enzymes, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle. Length = 450 |
>gnl|CDD|183393 PRK12273, aspA, aspartate ammonia-lyase; Provisional | Back alignment and domain information |
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Score = 67.1 bits (165), Expect = 1e-11 Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 19/190 (10%) Query: 126 LRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMF 185 +R+ + ++ + L++L KA+E + + G T LQ A P+T G AY Sbjct: 151 IRIALLLSLRKLLDALEQLQEAFEAKAKEFADILKMGRTQLQDAVPMTLGQEFGAYAVAL 210 Query: 186 GRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAK---------ELGFREPTRNSID 236 D R + + E L E LGA A GT + L P + I+ Sbjct: 211 AEDRKRLYRAAELLREVNLGATA-IGTGLNAPPGYIELVVEKLAEITGLPLV-PAEDLIE 268 Query: 237 SVSDRDFILECLSHSAI--CAMHMSRLAEEI-ILWSTPQ--FNFVRLSDAFSTGSSIMPQ 291 + D +E A+ A+ +S++ ++ +L S P+ N + L A GSSIMP Sbjct: 269 ATQDTGAFVEV--SGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLP-AVQAGSSIMPG 325 Query: 292 KRNPDGAELV 301 K NP E+V Sbjct: 326 KVNPVIPEVV 335 |
Length = 472 |
>gnl|CDD|176465 cd01362, Fumarase_classII, Class II fumarases | Back alignment and domain information |
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Score = 58.3 bits (142), Expect = 4e-09 Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 21/179 (11%) Query: 134 TLEITNDL----KKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDI 189 L + L K L+ L KA+E + + G THLQ A P+T G Y I Sbjct: 149 ALALQERLLPALKHLIDALDAKADEFKDIVKIGRTHLQDATPLTLGQEFSGYAAQLEHAI 208 Query: 190 SRFFDSIERLDECPLGAAALAGTSFPIDRHFTAK---------ELGFREPTRNSIDSVSD 240 +R ++ RL E LG A+ GT F K L F N ++++ Sbjct: 209 ARIEAALPRLYELALGGTAV-GTGLNAHPGFAEKVAAELAELTGLPFV-TAPNKFEALAA 266 Query: 241 RDFILECLSHSAI--CAMHMSRLAEEI-ILWSTPQFNFVRLS-DAFSTGSSIMPQKRNP 295 D ++E + A+ A+ + ++A +I L S P+ LS GSSIMP K NP Sbjct: 267 HDALVE--ASGALKTLAVSLMKIANDIRWLGSGPRCGLGELSLPENEPGSSIMPGKVNP 323 |
This subgroup contains Escherichia coli fumarase C, human mitochondrial fumarase, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle. Length = 455 |
>gnl|CDD|177743 PLN00134, PLN00134, fumarate hydratase; Provisional | Back alignment and domain information |
---|
Score = 57.8 bits (140), Expect = 6e-09 Identities = 47/166 (28%), Positives = 71/166 (42%), Gaps = 13/166 (7%) Query: 141 LKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLD 200 LK+L L K+ E + + G THLQ A P+T G Y ++R ++ RL Sbjct: 156 LKELHESLRAKSFEFKDIVKIGRTHLQDAVPLTLGQEFSGYATQVKYGLNRVQCTLPRLY 215 Query: 201 ECPLGAAALAGTSFPIDRHFTAK---------ELGFREPTRNSIDSVSDRDFILECLSHS 251 E G A+ GT + F K L F N ++++ D +E Sbjct: 216 ELAQGGTAV-GTGLNTKKGFDEKIAAAVAEETGLPFVTA-PNKFEALAAHDAFVELSGAL 273 Query: 252 AICAMHMSRLAEEI-ILWSTPQFNFVRLS-DAFSTGSSIMPQKRNP 295 A+ + ++A +I +L S P+ L+ GSSIMP K NP Sbjct: 274 NTVAVSLMKIANDIRLLGSGPRCGLGELNLPENEPGSSIMPGKVNP 319 |
Length = 458 |
>gnl|CDD|36531 KOG1317, KOG1317, KOG1317, Fumarase [Energy production and conversion] | Back alignment and domain information |
---|
Score = 57.7 bits (139), Expect = 7e-09 Identities = 49/179 (27%), Positives = 74/179 (41%), Gaps = 15/179 (8%) Query: 135 LEITNDL----KKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 EI + L L L K++E + I G TH Q A P+T G YV+ + Sbjct: 178 TEINSRLIPALTNLRDALEAKSKEFKDIIKIGRTHTQDAVPLTLGQEFSGYVQQVTNGLQ 237 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHF-------TAKELGFREPTR-NSIDSVSDRD 242 R ++ RL + G A+ GT + F A+ G T N ++++ D Sbjct: 238 RVAATLPRLYQLAQGGTAV-GTGLNTRKGFAEKIAARVAELTGLPFVTAPNKFEALAAHD 296 Query: 243 FILECLSHSAICAMHMSRLAEEI-ILWSTPQFNFVRLS-DAFSTGSSIMPQKRNPDGAE 299 ++E A+ + ++A +I L S P+ L GSSIMP K NP E Sbjct: 297 AMVEVSGALNTIAVSLMKIANDIRFLGSGPRCGLGELMLPENEPGSSIMPGKVNPTQCE 355 |
Length = 487 |
>gnl|CDD|130052 TIGR00979, fumC_II, fumarate hydratase, class II | Back alignment and domain information |
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Score = 56.7 bits (137), Expect = 1e-08 Identities = 50/169 (29%), Positives = 70/169 (41%), Gaps = 11/169 (6%) Query: 141 LKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLD 200 L+ L L K++E + + G THLQ A P+T G YV + R S+ L Sbjct: 161 LENLKKTLDAKSKEFAHIVKIGRTHLQDATPLTLGQEFSGYVAQLEHGLERIAYSLPHLY 220 Query: 201 ECPLGAAALAGTSFPIDRHFT-------AKELGFR-EPTRNSIDSVSDRDFILECLSHSA 252 E +G A+ GT F AKE G N ++++ D I+E Sbjct: 221 ELAIGGTAV-GTGLNTHPGFDEKVAEEIAKETGLPFVTAPNKFEALAAHDAIVEAHGALK 279 Query: 253 ICAMHMSRLAEEI-ILWSTPQFNFVRLS-DAFSTGSSIMPQKRNPDGAE 299 A + ++A +I L S P+ L GSSIMP K NP E Sbjct: 280 TLAASLMKIANDIRWLGSGPRCGLGELFIPENEPGSSIMPGKVNPTQCE 328 |
Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences, and score between the trusted and noise cutoffs. Length = 458 |
>gnl|CDD|181627 PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional | Back alignment and domain information |
---|
Score = 53.1 bits (128), Expect = 2e-07 Identities = 54/186 (29%), Positives = 73/186 (39%), Gaps = 10/186 (5%) Query: 140 DLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERL 199 DL +L L A H T M G T LQ A PVT G +++ R R R Sbjct: 130 DLDRLCDALATLAARHRATPMVGRTWLQQALPVTLGLKFAGWLDALLRHRQRLAALRPRA 189 Query: 200 DECPLGAAA-----LAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAIC 254 G AA L + P+ + A EL P + + RD I E S + Sbjct: 190 LVLQFGGAAGTLASLGEQALPVAQAL-AAELQLALPA---LPWHTQRDRIAEFASALGLL 245 Query: 255 AMHMSRLAEEI-ILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALL 313 A + ++A ++ +L T + A GSS MP KRNP G V R G + Sbjct: 246 AGTLGKIARDVSLLMQTEVGEVFEPAAAGKGGSSTMPHKRNPVGCAAVLTAATRAPGLVA 305 Query: 314 SLLTIM 319 +L M Sbjct: 306 TLFAAM 311 |
Length = 452 |
>gnl|CDD|180954 PRK07380, PRK07380, adenylosuccinate lyase; Provisional | Back alignment and domain information |
---|
Score = 44.3 bits (105), Expect = 8e-05 Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 18/168 (10%) Query: 137 ITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSI 196 + +L+ L+ + +A EH NT+M G +H A+P+TFG ++ R+ R + Sbjct: 113 LLEELEDLIQAIRYQAREHRNTVMIGRSHGIHAEPITFGFKLAGWLAETLRNRER----L 168 Query: 197 ERLDE-CPLGAAALA-GTSFPID---RHFTAKELGFREPTRNSIDSVSDRDFILECLSHS 251 RL E +G + A GT D T ++LG +P S +S RD E + Sbjct: 169 VRLREDIAVGQISGAVGTYANTDPRVEAITCQKLGL-KPDTASTQVIS-RDRHAEYVQTL 226 Query: 252 AICAMHMSRLAEEII-LWSTPQFNFVRLSDAFST---GSSIMPQKRNP 295 A+ + R A EI L T + + + + F+ GSS MP KRNP Sbjct: 227 ALVGASLERFATEIRNLQRT---DVLEVEEYFAKGQKGSSAMPHKRNP 271 |
Length = 431 |
>gnl|CDD|176471 cd03302, Adenylsuccinate_lyase_2, Adenylsuccinate lyase (ASL)_subgroup 2 | Back alignment and domain information |
---|
Score = 42.7 bits (101), Expect = 2e-04 Identities = 43/177 (24%), Positives = 66/177 (37%), Gaps = 32/177 (18%) Query: 141 LKKLLTI---LLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVE---MFGRDISRFFD 194 L KL + L + A E+ + GFTH Q AQ T G +++ M R++ R D Sbjct: 116 LPKLAAVIDRLAEFALEYKDLPTLGFTHYQPAQLTTVGKRACLWIQDLLMDLRNLERLRD 175 Query: 195 SIERLDECPLGAAALAGTS------FPIDRH-------FTAKELGFREPTRNSIDSVSDR 241 + G GT F D K+ GF++ R Sbjct: 176 DL-----RFRGVKGTTGTQASFLDLFEGDHDKVEALDELVTKKAGFKK-VYPVTGQTYSR 229 Query: 242 DFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFST---GSSIMPQKRNP 295 ++ L+ + ++A +I L + N + + F GSS MP KRNP Sbjct: 230 KVDIDVLNALSSLGATAHKIATDIRLLA----NLKEVEEPFEKGQIGSSAMPYKRNP 282 |
This subgroup contains mainly eukaryotic proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). ASL deficiency has been linked to several pathologies including psychomotor retardation with autistic features, epilepsy and muscle wasting. Length = 436 |
>gnl|CDD|179045 PRK00485, fumC, fumarate hydratase; Reviewed | Back alignment and domain information |
---|
Score = 58.2 bits (142), Expect = 4e-09 Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 5/83 (6%) Query: 134 TLEITNDL----KKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDI 189 L I L + L L KAEE + + G THLQ A P+T G Y I Sbjct: 153 VLAIVERLLPALEHLRDTLAAKAEEFADIVKIGRTHLQDATPLTLGQEFSGYAAQLEHGI 212 Query: 190 SRFFDSIERLDECPLGAAALAGT 212 R ++ L E LG A GT Sbjct: 213 ERIEAALPHLYELALGGTA-VGT 234 |
Length = 464 |
Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
Identity | Alignment graph | Length | Definition | Probability |
Target | 473 | argininosuccinate lyase [Candidatus Liberibacter asiati | ||
TIGR00838 | 469 | argH argininosuccinate lyase; InterPro: IPR009049 This | 100.0 | |
PRK12308 | 614 | bifunctional argininosuccinate lyase/N-acetylglutamate | 100.0 | |
COG0165 | 459 | ArgH Argininosuccinate lyase [Amino acid transport and | 100.0 | |
PRK04833 | 455 | argininosuccinate lyase; Provisional | 100.0 | |
PRK00855 | 459 | argininosuccinate lyase; Provisional | 100.0 | |
PRK06705 | 502 | argininosuccinate lyase; Provisional | 100.0 | |
KOG1316 | 464 | consensus | 100.0 | |
cd01359 | 435 | Argininosuccinate_lyase Argininosuccinate lyase (argini | 100.0 | |
PRK02186 | 892 | argininosuccinate lyase; Provisional | 100.0 | |
PRK08540 | 449 | adenylosuccinate lyase; Reviewed | 100.0 | |
cd01597 | 437 | pCLME pCLME: prokaryotic 3-carboxy-cis,cis-muconate cyc | 100.0 | |
PRK08470 | 442 | adenylosuccinate lyase; Provisional | 100.0 | |
PRK07380 | 431 | adenylosuccinate lyase; Provisional | 100.0 | |
PRK09053 | 452 | 3-carboxy-cis,cis-muconate cycloisomerase; Provisional | 100.0 | |
PRK08937 | 425 | adenylosuccinate lyase; Provisional | 100.0 | |
PRK06390 | 451 | adenylosuccinate lyase; Provisional | 100.0 | |
TIGR00928 | 469 | purB adenylosuccinate lyase; InterPro: IPR004769 A numb | 100.0 | |
COG0015 | 438 | PurB Adenylosuccinate lyase [Nucleotide transport and m | 100.0 | |
PRK12273 | 471 | aspA aspartate ammonia-lyase; Provisional | 100.0 | |
PRK12425 | 464 | fumarate hydratase; Provisional | 100.0 | |
PRK09285 | 456 | adenylosuccinate lyase; Provisional | 100.0 | |
KOG2700 | 481 | consensus | 100.0 | |
PRK06389 | 434 | argininosuccinate lyase; Provisional | 100.0 | |
PRK07492 | 433 | adenylosuccinate lyase; Provisional | 100.0 | |
cd01362 | 455 | Fumarase_classII Class II fumarases. This group contain | 100.0 | |
cd01357 | 450 | Aspartatase Aspartase_like. This group contains protein | 100.0 | |
PRK00485 | 462 | fumC fumarate hydratase; Reviewed | 100.0 | |
cd03302 | 436 | Adenylsuccinate_lyase_2 Adenylsuccinate lyase_2: Adenyl | 100.0 | |
PRK13353 | 473 | aspartate ammonia-lyase; Provisional | 100.0 | |
cd01596 | 450 | Aspartatase_like Aspartase_like. This group contains pr | 100.0 | |
COG1027 | 471 | AspA Aspartate ammonia-lyase [Amino acid transport and | 100.0 | |
cd01598 | 425 | PurB PurB: PurB_like adenylosuccinases (adenylsuccinate | 100.0 | |
COG0114 | 462 | FumC Fumarase [Energy production and conversion] | 100.0 | |
TIGR00839 | 469 | aspA aspartate ammonia-lyase; InterPro: IPR004708 A num | 100.0 | |
TIGR00979 | 459 | fumC_II fumarate hydratase, class II; InterPro: IPR0056 | 100.0 | |
KOG1317 | 487 | consensus | 100.0 | |
cd01360 | 387 | Adenylsuccinate_lyase_1 Adenylsuccinate lyase_1: Adenyl | 100.0 | |
cd01595 | 381 | Adenylsuccinate_lyase_like Adenylsuccinate lyase_like ( | 100.0 | |
pfam00206 | 312 | Lyase_1 Lyase. | 100.0 | |
cd01334 | 330 | Lyase_I Lyase class I family of the Lyase_I superfamily | 100.0 | |
cd01594 | 231 | Lyase_I_like Lyase class I_like. Lyase class I_like sup | 100.0 | |
PRK05975 | 353 | 3-carboxy-cis,cis-muconate cycloisomerase; Provisional | 100.0 | |
TIGR02426 | 351 | protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase | 100.0 | |
pfam10397 | 81 | ADSL_C Adenylosuccinate lyase C-terminus. This is the C | 98.34 | |
pfam08328 | 115 | ASL_C Adenylosuccinate lyase C-terminal. This domain is | 95.9 | |
KOG2700 | 481 | consensus | 94.66 |
>TIGR00838 argH argininosuccinate lyase; InterPro: IPR009049 This entry represents argininosuccinate lyase, but may include examples of avian delta crystallins, in which argininosuccinate lyase activity may or may not be present and the biological role is to provide the optically clear cellular protein of the eye lens | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=1232.45 Aligned_cols=455 Identities=51% Similarity=0.836 Sum_probs=451.1 Q ss_pred HCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC-CEECCCCCC Q ss_conf 2033238434699998425507899999999999999999999879999899999999999999666459-800156646 Q gi|254780370|r 13 MWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDG-SFVFSRDLE 91 (473) Q Consensus 13 lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~-~~~~~~~~e 91 (473) T Consensus 1 LW~GRf~~~~~~~~~~f~~Sl~FD~~l~~~Di~~~~AH~~~L~k~GiLt~Ee~~~l~~gL~~l~~e~~~~P~~~~~~~~E 80 (469) T TIGR00838 1 LWGGRFTGGTDPAVAKFNASLSFDKELAEADIEGSIAHTKMLKKAGILTEEEAAKLIEGLNELKEEVREGPKFNLDVDLE 80 (469) T ss_pred CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC T ss_conf 96542245700799960487578999999721335999999875279888899999999999999886088878961710 Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH Q ss_conf 379999999973111-0234201441011237887999999999999867788999997447730145200166530113 Q gi|254780370|r 92 DIHMNIEARLTSLIG-SIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQ 170 (473) Q Consensus 92 dvh~~iE~~l~~~~G-~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~ 170 (473) T Consensus 81 DiH~a~E~~Li~~~G~d~ggklHTGRSRNDQVATDlrl~lr~~v~~~~~~l~~~~~~L~e~Ae~~~~~~mPGYTHLQrAQ 160 (469) T TIGR00838 81 DIHMAIERELIDRVGEDLGGKLHTGRSRNDQVATDLRLYLRDHVREIAEALLDLQKVLIELAEKHVETLMPGYTHLQRAQ 160 (469) T ss_pred HHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCC T ss_conf 35679988887623701013124678764178998999999999999999999999999986128736614851013501 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHH Q ss_conf 34445678888887862069899987454233565320335666789989631038764347856730278864246777 Q gi|254780370|r 171 PVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 (473) Q Consensus 171 P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~ 250 (473) T Consensus 161 Pi~lAHhLLAY~~~l~RD~~RL~d~~kR~n~SPLGsGAlAGt~f~iDR~~~A~lLGF~~~~~NSlDaVSdRDFi~E~l~~ 240 (469) T TIGR00838 161 PITLAHHLLAYAEMLERDYERLQDALKRVNVSPLGSGALAGTSFPIDREYTAELLGFDAVTENSLDAVSDRDFIIELLFV 240 (469) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHH T ss_conf 05699999999989998899999999885048865503206898768888976318678875204665207899999999 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCH Q ss_conf 68876648999999999841245615404554565300444336013899876689997523358767404840000100 Q gi|254780370|r 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDM 330 (473) Q Consensus 251 l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDl 330 (473) T Consensus 241 ~a~~m~hLSR~aEelIlw~s~EFgfieL~D~~stGSSiMPQKKNPD~aELiRGK~Grv~G~L~g~L~~lKalP~aYNrDl 320 (469) T TIGR00838 241 AALIMVHLSRLAEELILWSSQEFGFIELPDEFSTGSSIMPQKKNPDVAELIRGKTGRVIGNLTGLLTILKALPLAYNRDL 320 (469) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC T ss_conf 99997417689899999844687606745732005768888777207999987552689999999999711233235100 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC Q ss_conf 10055798899999986567652305866652101211237844399999999985399979999999999999998298 Q gi|254780370|r 331 QEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQC 410 (473) Q Consensus 331 q~~~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~ 410 (473) T Consensus 321 QEdkE~LFD~v~t~~~~~~~~~~~l~~i~vn~er~~e~A~~~f~~ATdLADyLV~k~GVPFR~AH~ivG~~V~~~~e~G~ 400 (469) T TIGR00838 321 QEDKEPLFDAVKTVELSLEVMTGMLDTIKVNKERMEEAASAGFSNATDLADYLVRKRGVPFREAHHIVGELVATAIERGK 400 (469) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC T ss_conf 13783678899999999999999983081587899998644887078899999834799806778999999999997278 Q ss_pred --------CHHHCCHHHHHHHHHCCCHH-HHHHCCHHHHHHHCCCCCCCCH---HHHHHHHHHHHHHHH Q ss_conf --------96898999999400113268-9996599999962148999998---999999999999999 Q gi|254780370|r 411 --------ELAKLPLAMLQQISPVITSA-VYDILKVESSISSRKSFGGTCA---AEVLKQVTYWRNRIQ 467 (473) Q Consensus 411 --------~l~el~~~~~~~~~~~~~~d-i~~~ldp~~~v~~R~s~GGtap---~~V~~~i~~~r~~L~ 467 (473) T Consensus 401 ~PGd~~~~~L~~lt~ee~~~~~~~~~ed~v~~~L~~~~~V~~R~~~GGtapGrv~~V~~~I~~aK~~l~ 469 (469) T TIGR00838 401 SPGDVDASGLEELTLEELQKFSEEFEEDKVYEALDPEESVEKRDAYGGTAPGRVEEVEKAIEEAKARLA 469 (469) T ss_pred CCCCCCCCHHHHCCHHHHHHHCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC T ss_conf 999865101231367999974213573357774287999970257887881069999999999987509 |
; GO: 0004056 argininosuccinate lyase activity, 0042450 arginine biosynthetic process via ornithine. |
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=1114.98 Aligned_cols=457 Identities=46% Similarity=0.754 Sum_probs=450.4 Q ss_pred HHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCE-ECCCCC Q ss_conf 3203323843469999842550789999999999999999999987999989999999999999966645980-015664 Q gi|254780370|r 12 QMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSF-VFSRDL 90 (473) Q Consensus 12 ~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~-~~~~~~ 90 (473) T Consensus 2 ~LWgGRF~~~~~~~~~~fn~Si~fD~rL~~~DI~gSiAHa~mL~~~gIlt~~E~~~I~~gL~~I~~ei~~~~~~~~~~~~ 81 (614) T PRK12308 2 ALWGGRFSQAADTRFKQFNDSLRFDYRLAEQDIVGSIAWSKALLSVGVLSEEEQQKLELALNELKLEVMEDPEQILLSDA 81 (614) T ss_pred CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC T ss_conf 96445579971399998668777889999999877799999998779989999999999999999999839933589985 Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH Q ss_conf 63799999999731110234201441011237887999999999999867788999997447730145200166530113 Q gi|254780370|r 91 EDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQ 170 (473) Q Consensus 91 edvh~~iE~~l~~~~G~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~ 170 (473) T Consensus 82 EDIH~~IE~~L~e~iG~~G~KLHTgRSRNDQVatd~RL~~r~~~~~i~~~l~~L~~~l~~~Ae~~~~~iMPGYTHLQ~AQ 161 (614) T PRK12308 82 EDIHSWVEQQLIGKVGDLGKKLHTGRSRNDQVATDLKLWCRQQGQQLLLALDQLQQQMVNVAERHQGTVLPGYTHLQRAQ 161 (614) T ss_pred CCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE T ss_conf 34408999999998615446210246789999999999999999999999999999999999976798257865664421 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHH Q ss_conf 34445678888887862069899987454233565320335666789989631038764347856730278864246777 Q gi|254780370|r 171 PVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 (473) Q Consensus 171 P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~ 250 (473) T Consensus 162 Pvt~~H~llAy~e~l~RD~~RL~d~~~r~n~~PLGsgAlAGT~~pIDR~~tA~~LGF~~~~~NSlDAVSdRDf~~E~l~~ 241 (614) T PRK12308 162 PVTFAHWCLAYVEMFERDYSRLEDALTRLDTCPLGSGALAGTAYPIDREALAHNLGFRRATRNSLDSVSDRDHVMELMSV 241 (614) T ss_pred ECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH T ss_conf 11399999999999999999999999985759754313468989879999999759998667888898725899999999 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCH Q ss_conf 68876648999999999841245615404554565300444336013899876689997523358767404840000100 Q gi|254780370|r 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDM 330 (473) Q Consensus 251 l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDl 330 (473) T Consensus 242 ~s~~m~hLSRlaEdlIlwsS~EFgfi~L~D~~sTGSSIMPQKKNPDv~ELiRGK~Grv~G~L~~lLt~mKgLPlaYNkDl 321 (614) T PRK12308 242 ASISMLHLSRLAEDLIFYNSGESGFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVYGALAGMMMTVKALPLAYNKDM 321 (614) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH T ss_conf 99999999999999999837036848706655445555777779868999887753245389999999766842113143 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC Q ss_conf 10055798899999986567652305866652101211237844399999999985399979999999999999998298 Q gi|254780370|r 331 QEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQC 410 (473) Q Consensus 331 q~~~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~ 410 (473) T Consensus 322 QEDKe~lfda~dt~~~~l~~~~~m~~~l~~n~e~m~~aa~~gf~~ATdlADyLV~-kGvPFReAH~ivG~~V~~a~~~g~ 400 (614) T PRK12308 322 QEDKEGLFDALDTWNDCMEMAALCFDGIKVNGERTLEAAKQGYANATELADYLVA-KGIPFREAHHIVGVAVVGAIAKGC 400 (614) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHCCCCHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHCCC T ss_conf 2001787768999999999999987438378999998853585028999999998-799788889999999999998199 Q ss_pred CHHHCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 96898999999400113268999659999996214899999899999999999999985 Q gi|254780370|r 411 ELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNI 469 (473) Q Consensus 411 ~l~el~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~~i~~~r~~L~~~ 469 (473) T Consensus 401 ~L~~L~L~e~q~~s~~i~~DVy~~L~~e~~v~~R~~~GGtap~qV~~ai~~a~~rl~~~ 459 (614) T PRK12308 401 ALEELSLEQLKEFSDVIEDDVYQILTIESCLEKRCALGGVSPEQVAYAVKQAKKRLAAR 459 (614) T ss_pred CHHHCCHHHHHHHCHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC T ss_conf 70008899998756022367988708998998723889999899999999999998725 |
|
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism] | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=1068.43 Aligned_cols=457 Identities=56% Similarity=0.887 Sum_probs=453.2 Q ss_pred HHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCC Q ss_conf 33320332384346999984255078999999999999999999998799998999999999999996664598001566 Q gi|254780370|r 10 VNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRD 89 (473) Q Consensus 10 ~~~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~ 89 (473) T Consensus 2 ~~~lwggRf~~~~~~~~~~~~~Si~~D~~l~~~di~~s~Ah~~mL~~~Gii~~ee~~~Il~~L~~l~~e~~~g~~~~~~~ 81 (459) T COG0165 2 SNKLWGGRFSGGPDPLVKEFNASISFDKRLAEYDIAGSIAHAKMLAKQGIITEEEAAKILEGLEELLEEIRAGKFELDPD 81 (459) T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC T ss_conf 98777887667876799998245026799999999875999999998699889999999999999999875488657986 Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH Q ss_conf 46379999999973111023420144101123788799999999999986778899999744773014520016653011 Q gi|254780370|r 90 LEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTA 169 (473) Q Consensus 90 ~edvh~~iE~~l~~~~G~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A 169 (473) T Consensus 82 ~EDvH~aiE~~L~~~iG~~ggkLhtgRSRNDQVatd~rL~lr~~~~~l~~~i~~l~~aL~~~Ae~~~~~imPGyTHlQ~A 161 (459) T COG0165 82 DEDVHTAIEARLIERIGDVGGKLHTGRSRNDQVATDLRLWLRDKLLELLELIRILQKALLDLAEEHAETVMPGYTHLQRA 161 (459) T ss_pred CCCHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC T ss_conf 01089999999999974422200024563389999999999999999999999999999999998068746785446535 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHH Q ss_conf 33444567888888786206989998745423356532033566678998963103876434785673027886424677 Q gi|254780370|r 170 QPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLS 249 (473) Q Consensus 170 ~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~ 249 (473) T Consensus 162 QPvtf~H~llay~~~l~RD~~Rl~d~~~rvn~sPLGagAlaGt~~~iDR~~tA~lLGF~~~~~Nsldavs~Rdf~le~l~ 241 (459) T COG0165 162 QPVTFAHHLLAYAEMLARDIERLRDALKRVNVSPLGAGALAGTPFPIDRERTAELLGFDAVTRNSLDAVSDRDFILEFLS 241 (459) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHH T ss_conf 76849999999999999899999999987435986434567899988989999883981332173456652799999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC Q ss_conf 76887664899999999984124561540455456530044433601389987668999752335876740484000010 Q gi|254780370|r 250 HSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKD 329 (473) Q Consensus 250 ~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rD 329 (473) T Consensus 242 ~~a~~~~~LSRlaedlI~wss~EfgfI~l~D~~sTGSSIMPQKKNPD~~ELiRgk~grv~G~l~~ll~~~k~lPlaYnrD 321 (459) T COG0165 242 AAALIMVHLSRLAEDLILWSSPEFGFIELPDEFSTGSSIMPQKKNPDVLELIRGKAGRVIGALTGLLTIMKGLPLAYNRD 321 (459) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH T ss_conf 99999999999999999870546762767855555666688888986899987755426989999999980686512477 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC Q ss_conf 01005579889999998656765230586665210121123784439999999998539997999999999999999829 Q gi|254780370|r 330 MQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQ 409 (473) Q Consensus 330 lq~~~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g 409 (473) T Consensus 322 lQedke~lfds~~t~~~~l~~~~~mv~~l~vn~e~~~~a~~~gfs~aTdlAd~lv~-kGvPFReAh~ivG~~v~~~~~~~ 400 (459) T COG0165 322 LQEDKEPLFDSVDTLEDSLRVLAGMVSGLTVNKERMREAAEAGFSTATDLADYLVR-KGVPFREAHEIVGEAVRRAEERG 400 (459) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHCC T ss_conf 78633889999999999999999987217457888998764362058999999987-69987999999999999998749 Q ss_pred CCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH Q ss_conf 8968989999994001132689996599999962148999998999999999999999 Q gi|254780370|r 410 CELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQ 467 (473) Q Consensus 410 ~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~~i~~~r~~L~ 467 (473) T Consensus 401 ~~l~~l~~~~~~~~~~~~~~dv~~~l~~~~~v~~R~~~Ggtap~~v~~~i~~~~~~l~ 458 (459) T COG0165 401 KDLADLSLEELQSISPLIDEDVYEVLTPEESVAKRNSEGGTAPEEVREAIARAKARLA 458 (459) T ss_pred CCHHHCCHHHHHHHCCCCCHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC T ss_conf 9877502788863132211689998466999987204699988999999999997634 |
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>PRK04833 argininosuccinate lyase; Provisional | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=1066.08 Aligned_cols=453 Identities=46% Similarity=0.738 Sum_probs=446.4 Q ss_pred HHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEC-CCCC Q ss_conf 320332384346999984255078999999999999999999998799998999999999999996664598001-5664 Q gi|254780370|r 12 QMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVF-SRDL 90 (473) Q Consensus 12 ~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~-~~~~ 90 (473) T Consensus 2 ~lW~gRf~~~~~~~~~~~~~Si~~D~~L~~~Di~~s~AH~~mL~~~gil~~~e~~~I~~~L~~i~~~~~~g~~~~~~~~~ 81 (455) T PRK04833 2 ALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSIAWSKALVTVGVLTADEQQQLEEALNELLEEVRANPQQILASDA 81 (455) T ss_pred CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC T ss_conf 97655778984599998757788899999999998999999999889989999999999999999999859910389997 Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH Q ss_conf 63799999999731110234201441011237887999999999999867788999997447730145200166530113 Q gi|254780370|r 91 EDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQ 170 (473) Q Consensus 91 edvh~~iE~~l~~~~G~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~ 170 (473) T Consensus 82 EDiH~~IE~~L~e~~G~~ggklHtgRSRNDqv~t~~rL~~r~~l~~l~~~l~~L~~~l~~~A~~~~~~impGyTHlQ~Aq 161 (455) T PRK04833 82 EDIHSWVEGKLIDKVGDLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAENNQDAVMPGYTHLQRAQ 161 (455) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE T ss_conf 55489999999999743787863257788899999999999999999999999999999999976698443754454314 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHH Q ss_conf 34445678888887862069899987454233565320335666789989631038764347856730278864246777 Q gi|254780370|r 171 PVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 (473) Q Consensus 171 P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~ 250 (473) T Consensus 162 P~t~gh~l~a~~~~l~rd~~rL~~~~~r~n~~PLGa~A~aGT~~pidR~~~A~~LGF~~~~~Nsldavs~rD~~~e~~~~ 241 (455) T PRK04833 162 PVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGSGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSA 241 (455) T ss_pred EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHH T ss_conf 41099999999999999999999899873427541232169876665999998849986453579999743299999999 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCH Q ss_conf 68876648999999999841245615404554565300444336013899876689997523358767404840000100 Q gi|254780370|r 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDM 330 (473) Q Consensus 251 l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDl 330 (473) T Consensus 242 ~a~~~~~LsRiaeDlil~ss~efg~i~l~d~~~tGSSIMPQKkNPd~lEliRgka~~v~G~l~~ll~~~k~lP~~ynrDl 321 (455) T PRK04833 242 ASISMVHLSRFAEDLIFFNSGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMLMTLKGLPLAYNKDM 321 (455) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH T ss_conf 99999999999999999825678848727766787888755569738999987677886799999999758986344316 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC Q ss_conf 10055798899999986567652305866652101211237844399999999985399979999999999999998298 Q gi|254780370|r 331 QEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQC 410 (473) Q Consensus 331 q~~~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~ 410 (473) T Consensus 322 qedk~~l~~a~~~~~~~l~l~~~~i~~l~~n~~~~~~~~~~~~~~ATdlAd~LV~-~GvpFR~AH~ivg~lV~~~~~~~~ 400 (455) T PRK04833 322 QEDKEGLFDALDTWLDCLHMAALVLDGIQVNRPRCQEAAQQGYANATELADYLVA-KGVPFREAHHIVGEAVVEAIRQGK 400 (455) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHCCC T ss_conf 6637889999999999999999999863568178998761473309999999998-599889999999999999998399 Q ss_pred CHHHCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHH Q ss_conf 9689899999940011326899965999999621489999989999999999999 Q gi|254780370|r 411 ELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNR 465 (473) Q Consensus 411 ~l~el~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~~i~~~r~~ 465 (473) T Consensus 401 ~l~~l~~~~~~~~~~~~~~dv~~~ld~~~~v~~R~~~Ggtap~~V~~~i~~~k~r 455 (455) T PRK04833 401 PLEDLPLAELQKFSAVIGDDVYPILSLQSCLDKRAAKGGVSPQQVAQAIAAAKAR 455 (455) T ss_pred CHHHCCHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCC T ss_conf 9354999999976201348999868999999865589999899999999998529 |
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>PRK00855 argininosuccinate lyase; Provisional | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=1040.60 Aligned_cols=457 Identities=59% Similarity=0.912 Sum_probs=451.9 Q ss_pred HHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCC Q ss_conf 33320332384346999984255078999999999999999999998799998999999999999996664598001566 Q gi|254780370|r 10 VNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRD 89 (473) Q Consensus 10 ~~~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~ 89 (473) T Consensus 3 ~~~lW~gr~~~~~~~~~~~~~~s~~~D~~l~~~di~~s~AH~~~L~~~gil~~~e~~~I~~~L~~i~~~~~~g~~~~~~~ 82 (459) T PRK00855 3 SNKLWGGRFSEGPDALVERFTASISFDKRLAEEDIAGSIAHATMLAKQGILSEEEAEKILAGLDEILAEIEAGEFEFSVE 82 (459) T ss_pred CCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC T ss_conf 75553768899853999998466988999999999989999999998799899999999999999998775498767887 Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH Q ss_conf 46379999999973111023420144101123788799999999999986778899999744773014520016653011 Q gi|254780370|r 90 LEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTA 169 (473) Q Consensus 90 ~edvh~~iE~~l~~~~G~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A 169 (473) T Consensus 83 ~EDih~~iE~~L~e~~G~~g~~lH~gRSRNDqv~t~~rL~~r~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpGyTHlQ~A 162 (459) T PRK00855 83 LEDIHMAIEARLTERIGDAGGKLHTGRSRNDQVATDLRLYLRDEIDEIAELLLELQKALLDQAEEHADTIMPGYTHLQRA 162 (459) T ss_pred CCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC T ss_conf 54289999999999847305231667778889999999999999999999999999999999997569870066566402 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHH Q ss_conf 33444567888888786206989998745423356532033566678998963103876434785673027886424677 Q gi|254780370|r 170 QPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLS 249 (473) Q Consensus 170 ~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~ 249 (473) T Consensus 163 qP~T~g~~l~a~~~~l~rd~~rl~~~~~r~~~~pLG~~A~~Gt~~~idr~~~a~~LGf~~~~~ns~davs~rd~~~e~~~ 242 (459) T PRK00855 163 QPVTFGHHLLAYAEMLARDLERLRDARKRVNRSPLGAAALAGTSFPIDRERTAELLGFDGVTENSLDAVSDRDFALEFLS 242 (459) T ss_pred EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHH T ss_conf 45119889999999999999999988876300755533455788777768999980998655660776732538999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC Q ss_conf 76887664899999999984124561540455456530044433601389987668999752335876740484000010 Q gi|254780370|r 250 HSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKD 329 (473) Q Consensus 250 ~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rD 329 (473) T Consensus 243 ~la~~~~~LsRia~Dl~l~ss~e~g~v~l~d~~~~GSSiMPqKrNP~~lEliR~~~~~~~G~l~~ll~~~~~lp~~y~rD 322 (459) T PRK00855 243 AASLLMVHLSRLAEELILWSSPEFGFVELPDAFSTGSSIMPQKKNPDVAELIRGKTGRVYGHLTGLLTVMKGLPLAYNKD 322 (459) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC T ss_conf 99999999999999999982865685751788899798875666960899999999999868889999982896032001 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC Q ss_conf 01005579889999998656765230586665210121123784439999999998539997999999999999999829 Q gi|254780370|r 330 MQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQ 409 (473) Q Consensus 330 lq~~~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g 409 (473) T Consensus 323 lQe~k~~~~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~AtdlAd~Lv~-~GipFR~AH~iV~~~v~~a~~~~ 401 (459) T PRK00855 323 LQEDKEPLFDAVDTLKLSLEAFAGMLETLTVNKERMREAAEKGFSTATDLADYLVR-KGVPFRDAHEIVGKAVKEAEERG 401 (459) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHCC T ss_conf 88778888899999999999999886030227999999885483079999999998-69988999999999999999819 Q ss_pred CCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH Q ss_conf 8968989999994001132689996599999962148999998999999999999999 Q gi|254780370|r 410 CELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQ 467 (473) Q Consensus 410 ~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~~i~~~r~~L~ 467 (473) T Consensus 402 ~~l~el~~~~~~~~~~~~~~~i~~~ldp~~~v~~r~~~Gg~ap~~v~~~i~~~~~~L~ 459 (459) T PRK00855 402 VDLADLSLEELQAFSPLIEEDVYEVLTPEGSVAARNSIGGTAPEQVREQIARAKARLA 459 (459) T ss_pred CCHHHCCHHHHHHHCHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC T ss_conf 9967689999987640025999986799999986548999989999999999998609 |
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>PRK06705 argininosuccinate lyase; Provisional | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=1000.08 Aligned_cols=450 Identities=28% Similarity=0.442 Sum_probs=432.7 Q ss_pred HHHHHHHHCCCHHHH---HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHH Q ss_conf 469999842550789---99999999999999999998799998999999999999996664598001566463799999 Q gi|254780370|r 22 PSWIMEKINVSIDFD---KKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIE 98 (473) Q Consensus 22 ~~~~~~~~~~s~~~D---~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~~edvh~~iE 98 (473) T Consensus 17 p~~~y~~~vL~~~f~~~~~~l~~~~~~in~AH~~ML~~~gIi~~~ea~~I~~gL~~i-~~~~~~~~~~~~~~EDih~~iE 95 (502) T PRK06705 17 PGKTYVDCVLQHVFNFQRNYLLKDMFQVHKAHIVMLTEENLMKKEEAKFILHALKKV-EEIPEEQLLYTEQHEDLFFLVE 95 (502) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH-HHHHCCCCCCCCCCHHHHHHHH T ss_conf 828999998326689999998898988999999999887998999999999999999-8765399526996320589999 Q ss_pred HHHHHHH-HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH Q ss_conf 9997311-102342014410112378879999999999998677889999974477301452001665301133444567 Q gi|254780370|r 99 ARLTSLI-GSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHH 177 (473) Q Consensus 99 ~~l~~~~-G~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~P~T~g~~ 177 (473) T Consensus 96 ~~L~~~~ggd~ggklHtgRSRNDqvat~~Rl~~R~~l~~i~~~l~~l~~~l~~~A~~~~~timPgYTHlQ~AQP~t~gh~ 175 (502) T PRK06705 96 HLISQEAKSDFVSNMHIGRSRNDMGVTMYRMSLRRYVLRLMEHHLLLQESILQLAADHKETIMPAYTHTQPAQPTTFGHY 175 (502) T ss_pred HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHH T ss_conf 99999847451031555478889999999999999999999999999999999999756863236444631101069899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHH Q ss_conf 88888878620698999874542335653203356667899896310387643478567302788642467776887664 Q gi|254780370|r 178 CMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMH 257 (473) Q Consensus 178 l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~l~~~~~~ 257 (473) T Consensus 176 l~a~~~~l~RD~~Rl~~~~~r~n~sPLGa~AlaGt~~piDR~~~A~lLGF~~~~~NS~davs~rD~~~e~~~~~s~~~~~ 255 (502) T PRK06705 176 TLAIYDTMQRDLERMKKTYKLLNQSPMGAAALSTTSFPIKRERVADLLGFTNVIENSYDAVAGADYLLEVSSLLMVMMTN 255 (502) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999850487310012578887788999987799987600399886336999999999999877 Q ss_pred HHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHH- Q ss_conf 8999999999841245615404554565300444336013899876689997523358767404840000100100557- Q gi|254780370|r 258 MSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEP- 336 (473) Q Consensus 258 l~rla~Dl~~~ss~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~~~~- 336 (473) T Consensus 256 LsRlaedlilwss~Ef~fi~l~d~~~tgSSIMPQKkNPd~lEliRgkag~v~G~l~~ll~~~kglP~~yn~D~qed~~~~ 335 (502) T PRK06705 256 TSRWIHDFLLLATKEYDGITVARPYVQISSIMPQKRNPVSIEHARAITSSALGEAFTVFQMIHNTPFGDIVDTEDDLQPY 335 (502) T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH T ss_conf 99999999999711579487078655666778867698389999999888888999999997589852242003120157 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCC Q ss_conf 98899999986567652305866652101211237844399999999985399979999999999999998298968989 Q gi|254780370|r 337 VFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLP 416 (473) Q Consensus 337 l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~ 416 (473) T Consensus 336 l~~a~~~~~~~l~l~~~~i~~l~~n~~~m~~~~~~~~~~ATdlAD~LVr~~gipFR~AH~ivg~~V~~a~~~~~~l~~l~ 415 (502) T PRK06705 336 LYKGIEKAIRVFCIMNAVIRTMKVEEDTLKRRSYKHAITITDFADVLTKNYGIPFRHAHHAASVIANMSLEQKKELHELC 415 (502) T ss_pred HHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCC T ss_conf 89999999999999999885380379999998754971399999999983598988999999999999997599913289 Q ss_pred HHHHHHHH------HCCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC Q ss_conf 99999400------113268999659999996214899999899999999999999985612 Q gi|254780370|r 417 LAMLQQIS------PVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNIPKK 472 (473) Q Consensus 417 ~~~~~~~~------~~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~~i~~~r~~L~~~~~~ 472 (473) T Consensus 416 ~~~~~~~~~~~~~~~l~e~~i~~aLdp~~~V~~R~~~GGpap~~v~r~I~~~~~~l~~~~~~ 477 (502) T PRK06705 416 FKDVNIYLQEKFKIQLLEKEWEEIISPEAFIQKRNVYGGPSKKEMERMINNRKELFRKEEEV 477 (502) T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999998740467989999998669999998734899998999999999999999999999 |
|
>KOG1316 consensus | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=962.36 Aligned_cols=460 Identities=46% Similarity=0.748 Sum_probs=452.9 Q ss_pred CHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECC Q ss_conf 02333203323843469999842550789999999999999999999987999989999999999999966645980015 Q gi|254780370|r 8 NEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFS 87 (473) Q Consensus 8 ~~~~~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~ 87 (473) T Consensus 3 ~~~~KlWGGRFtg~~dp~m~~fn~Si~ydk~ly~~Dv~gSkaya~~L~~~glit~~e~dkil~gLe~i~~ew~~~kf~~~ 82 (464) T KOG1316 3 SSSQKLWGGRFTGAVDPLMEKFNASIPYDKRLYEADVDGSKAYAKALEKAGLITEAELDKILKGLEKIRREWAAGKFKLN 82 (464) T ss_pred CCCHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEC T ss_conf 31022325636788877999864347530688876405449999999875887688899999779999999864946867 Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH Q ss_conf 66463799999999731110234201441011237887999999999999867788999997447730145200166530 Q gi|254780370|r 88 RDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQ 167 (473) Q Consensus 88 ~~~edvh~~iE~~l~~~~G~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q 167 (473) T Consensus 83 p~dEDvHtanErrL~eliG~~agKlHTgRSRNDQV~TDlRLw~r~~i~~~~~~l~~L~~~~v~rAe~~~dvlmpGYTHLQ 162 (464) T KOG1316 83 PNDEDVHTANERRLTELIGEIAGKLHTGRSRNDQVVTDLRLWLRDAIDTILGLLWNLIRVLVDRAEAELDVLMPGYTHLQ 162 (464) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHH T ss_conf 88134566789999998755643113576555336789999999999999999999999999998624472225716665 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHH Q ss_conf 11334445678888887862069899987454233565320335666789989631038764347856730278864246 Q gi|254780370|r 168 TAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILEC 247 (473) Q Consensus 168 ~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~~~a~~LGf~~~~~ns~dav~sRd~~~e~ 247 (473) T Consensus 163 RAQpvrwsH~LlSha~~l~~D~~Rl~q~~~R~n~~PLGagALAGnpl~iDR~~la~~LgF~~v~~NSm~AvsDRDFVvef 242 (464) T KOG1316 163 RAQPVRWSHWLLSHAEQLTRDLGRLVQIRKRLNQLPLGAGALAGNPLGIDREFLAEELGFEGVIMNSMDAVSDRDFVVEF 242 (464) T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCCHHHHHCCCCCHHHHHH T ss_conf 41673028999998999876788999999874248753211038987736899997558753001001101440267999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHC Q ss_conf 77768876648999999999841245615404554565300444336013899876689997523358767404840000 Q gi|254780370|r 248 LSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYS 327 (473) Q Consensus 248 ~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~ 327 (473) T Consensus 243 ~fw~sm~m~HlSRlaEdlIiy~t~EF~Fv~lSDaySTGSSlMPQKKNpDslELlRgksgrV~gdl~g~lmt~KG~PstYn 322 (464) T KOG1316 243 LFWASMVMTHLSRLAEDLIIYSTKEFGFVTLSDAYSTGSSLMPQKKNPDSLELLRGKSGRVFGDLTGLLMTLKGLPSTYN 322 (464) T ss_pred HHHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCC T ss_conf 99988999999987657603130114714301234567544777789977888635565433666878987267852013 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH Q ss_conf 10010055798899999986567652305866652101211237844399999999985399979999999999999998 Q gi|254780370|r 328 KDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEK 407 (473) Q Consensus 328 rDlq~~~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~ 407 (473) T Consensus 323 kDlQeDKep~Fds~~tv~~~l~v~tgv~stltvn~e~m~~aLt~d-mlATdlA~YLVr-KGvPFRqtHhisG~~V~~ae~ 400 (464) T KOG1316 323 KDLQEDKEPLFDSSKTVSDSLQVATGVISTLTVNQENMEKALTPD-MLATDLAYYLVR-KGVPFRQTHHISGKAVRMAEE 400 (464) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHCCCCH-HHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHH T ss_conf 203420037776688999999999877545367788886405801-557689999997-589821555666889999998 Q ss_pred CCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 29896898999999400113268999659999996214899999899999999999999985 Q gi|254780370|r 408 NQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNI 469 (473) Q Consensus 408 ~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~~i~~~r~~L~~~ 469 (473) T Consensus 401 rg~~l~~LsledlqklsplF~eDv~~v~~ye~sVek~~a~GgTa~s~V~eQl~~~k~al~~a 462 (464) T KOG1316 401 RGVTLDKLSLEDLQKLSPLFEEDVFCVFNYENSVEKRCAIGGTAKSCVLEQLRQLKKALLQA 462 (464) T ss_pred CCCCCCCCCHHHHHHCCCCCCCCHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 08870117799875127200011677605365688864237715789999999999998863 |
|
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL) | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=944.93 Aligned_cols=435 Identities=57% Similarity=0.874 Sum_probs=430.0 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHCCCCC Q ss_conf 50789999999999999999999987999989999999999999966645980015664637999999997311102342 Q gi|254780370|r 32 SIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGK 111 (473) Q Consensus 32 s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~~edvh~~iE~~l~~~~G~~~~~ 111 (473) T Consensus 1 s~~~d~~l~~~di~~~~AH~~mL~e~Gil~~~~a~~I~~al~~i~~~~~~~~~~~~~~~ed~~~~iE~~l~e~~g~~~~~ 80 (435) T cd01359 1 SISFDRRLFEEDIAGSIAHAVMLAEQGILTEEEAAKILAGLAKIRAEIEAGAFELDPEDEDIHMAIERRLIERIGDVGGK 80 (435) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCH T ss_conf 94688999999999999999999987999999999999999999824525873257877861699999999987577461 Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 01441011237887999999999999867788999997447730145200166530113344456788888878620698 Q gi|254780370|r 112 MHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISR 191 (473) Q Consensus 112 lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~r 191 (473) T Consensus 81 iH~GrSrND~v~Ta~~L~lr~~l~~l~~~l~~l~~~l~~~A~~~~~~~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~r 160 (435) T cd01359 81 LHTGRSRNDQVATDLRLYLRDALLELLELLLDLQRALLDRAEEHADTIMPGYTHLQRAQPITFGHYLLAYAEMLERDLER 160 (435) T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHH T ss_conf 03788788999999999999999999999999999999999974698712665662153522898999999999999999 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 99987454233565320335666789989631038764347856730278864246777688766489999999998412 Q gi|254780370|r 192 FFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTP 271 (473) Q Consensus 192 L~~~~~~~~~~pLG~~A~~GT~~~idr~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~ 271 (473) T Consensus 161 L~~~~~~~~~~plG~~A~~Gt~~~~dr~~~a~~LGf~~~~~ns~~av~~rd~~~e~~~~l~~~~~~l~ria~Dl~~~~s~ 240 (435) T cd01359 161 LADAYKRVNVSPLGAGALAGTTFPIDRERTAELLGFDGPTENSLDAVSDRDFVLEFLSAAALLMVHLSRLAEDLILWSTQ 240 (435) T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 99898664251345200368876777689999828997874678898704399999999999999999999999997066 Q ss_pred CCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 45615404554565300444336013899876689997523358767404840000100100557988999999865676 Q gi|254780370|r 272 QFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAI 351 (473) Q Consensus 272 e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~~~~l~~ai~~~~~~L~l~ 351 (473) T Consensus 241 e~g~iel~~~~~~GSSiMPqKrNP~~~E~iR~~a~~~~g~~~~~~~~~~~~p~~~~~d~q~~~~~l~~~~~~~~~~l~~~ 320 (435) T cd01359 241 EFGFVELPDAYSTGSSIMPQKKNPDVLELIRGKAGRVIGALAGLLTTLKGLPLAYNKDLQEDKEPLFDAVDTLIASLRLL 320 (435) T ss_pred CCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 67857525999997988634569558999999999887799999999706840034547887676778999999999999 Q ss_pred HHHHCCCEECCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHH Q ss_conf 52305866652101211237844399999999985399979999999999999998298968989999994001132689 Q gi|254780370|r 352 SAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAV 431 (473) Q Consensus 352 ~~li~~l~vn~erm~~~~~~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di 431 (473) T Consensus 321 ~~~l~~l~vn~~rm~~~~~~~~~~at~lA~~Lv~~~GipFR~AH~iV~~lv~~a~~~~~~l~el~~~~~~~~~~~~~~~i 400 (435) T cd01359 321 TGVISTLTVNPERMREAAEAGFSTATDLADYLVREKGVPFREAHHIVGRAVRLAEEKGKDLSDLTLAELQAISPLFEEDV 400 (435) T ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHCCCCHHHH T ss_conf 99885031079999998846811899999999998599889999999999999998199967668999964534788999 Q ss_pred HHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH Q ss_conf 99659999996214899999899999999999999 Q gi|254780370|r 432 YDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRI 466 (473) Q Consensus 432 ~~~ldp~~~v~~R~s~GGtap~~V~~~i~~~r~~L 466 (473) T Consensus 401 ~~~ldp~~~v~~r~~~Gg~ap~~v~~~i~~~~~~l 435 (435) T cd01359 401 REALDPENSVERRTSYGGTAPAEVREQIARARALL 435 (435) T ss_pred HHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC T ss_conf 98679999997565899998999999999998419 |
This group contains proteins similar to ASAL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASAL is a cytosolic enzyme which catalyzes the reversible breakdown of argininosuccinate to arginine and fumarate during arginine biosynthesis. In ureotleic species ASAL also catalyzes a reaction involved in the production of urea. Included in this group are the major soluble avian eye lens proteins from duck, delta 1 and delta 2 crystallin. Of these two isoforms only delta 2 has retained ASAL activity. These crystallins may have evolved by, gene recruitment of ASAL followed by gene duplication. In h |
>PRK02186 argininosuccinate lyase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=850.50 Aligned_cols=440 Identities=28% Similarity=0.380 Sum_probs=393.8 Q ss_pred HHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHH Q ss_conf 46999984255---078999999999999999999998799998999999999999996664598001566463799999 Q gi|254780370|r 22 PSWIMEKINVS---IDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIE 98 (473) Q Consensus 22 ~~~~~~~~~~s---~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~~edvh~~iE 98 (473) T Consensus 422 ~~p~~~~~~~~~~~~~~~~~~~~~~~~i~~ahl~ml~~~gi~~~~~~~~l~~~~~~l~~~~-~~~l~~~~~~rg~Yf~yE 500 (892) T PRK02186 422 LPPEAQAIVYGPGASEAPLAELDHLAAIDEAHLVMLGDTGIVAPERARPLLDAHRRLRDAG-FAPLLARPAPRGLYMLYE 500 (892) T ss_pred CCHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC-CHHHCCCCCCCCHHHHHH T ss_conf 8978875633875333634555545221266757877627877788899999999877468-344306878863013789 Q ss_pred HHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH Q ss_conf 99973111-02342014410112378879999999999998677889999974477301452001665301133444567 Q gi|254780370|r 99 ARLTSLIG-SIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHH 177 (473) Q Consensus 99 ~~l~~~~G-~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~P~T~g~~ 177 (473) T Consensus 501 ~~Lier~G~D~gG~LhtgRSRNDqvAT~~rl~lRd~~~~~~~~l~~L~~aL~~~Ae~~~~tvmPgyTHlQ~AQP~t~gH~ 580 (892) T PRK02186 501 AYLIERLGEDVGGVLQTARSRNDINATTTKLHLREATSRAFDALWRLRRALVFKASANVDCALPIYSQYQPALPGSLGHY 580 (892) T ss_pred HHHHHHHCHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH T ss_conf 99999828011262520533446899999999999999999999999999999998633865236445765674129999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHH Q ss_conf 88888878620698999874542335653203356667899896310387643478567302788642467776887664 Q gi|254780370|r 178 CMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMH 257 (473) Q Consensus 178 l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~l~~~~~~ 257 (473) T Consensus 581 Lla~~~~l~RD~~Rl~~~~~r~n~~PLGa~AlaGT~~piDr~~tA~lLGF~~~~~NSlDavs~RDf~~e~~~~~a~~~~~ 660 (892) T PRK02186 581 LLAVDGALARETHALFALFEHIDVCPLGAGAGGGTTFPIDPEFVARLLGFEQPAPNSLDAVASRDGVLHFLSAMAAISTV 660 (892) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHH T ss_conf 99999999859999999983236698520002589898698999998199875555312332118999999999999998 Q ss_pred HHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCH-HHHHHH Q ss_conf 8999999999841245615404554565300444336013899876689997523358767404840000100-100557 Q gi|254780370|r 258 MSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDM-QEDKEP 336 (473) Q Consensus 258 l~rla~Dl~~~ss~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDl-q~~~~~ 336 (473) T Consensus 661 lsRlaeel~lwss~efgfi~l~D~~~tgSSiMPQKkNPdvlElvRgKaGrviG~L~~lLt~lKglP~~yn~D~~~e~~~~ 740 (892) T PRK02186 661 LSRLAQDLQLWTTREFALVSLPDALTGGSSMLPQKKNPFLLEFVKGRAGVVAGALASASAALGKTPFSNSFEAGSPMNGP 740 (892) T ss_pred HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH T ss_conf 88999999997232557487675454456667867697189997320000388999999986358763344312220026 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCC Q ss_conf 98899999986567652305866652101211237844399999999985399979999999999999998298968989 Q gi|254780370|r 337 VFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLP 416 (473) Q Consensus 337 l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~ 416 (473) T Consensus 741 ~~da~d~~~~~L~l~~~~v~~~~~~~~rM~~aa~~gfstATdlAD~LVr~~GipFR~AH~iVG~~Vr~al~~g~~~~~~~ 820 (892) T PRK02186 741 IAQACAAIEDAAAVLVLLIDGLEADQARMRAHLEDGGVSATAVAESLVVRRSISFRSAHTQVGQAIRQSLDQGRSSADAL 820 (892) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH T ss_conf 89999999999999999984485089999998653871699999999986499878999999999999985599866789 Q ss_pred HHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 9999940011326899965999999621489999989999999999999998561 Q gi|254780370|r 417 LAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNIPK 471 (473) Q Consensus 417 ~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~~i~~~r~~L~~~~~ 471 (473) T Consensus 821 ~~~~~~~~~~~~~e~~~~~~---------fg~gp~~~~~~~~l~~~~~~~~~~~~ 866 (892) T PRK02186 821 AALDPQFVSRAPLEWARSHR---------FGGGPGAADLNAGLARACAALRDDEA 866 (892) T ss_pred HHHCCCCCCCCCHHHHHHHH---------HCCCCCCCCCCCHHHHHHHHHHHHHH T ss_conf 87352422248767888865---------06899853212348999999875699 |
|
>PRK08540 adenylosuccinate lyase; Reviewed | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=637.02 Aligned_cols=418 Identities=22% Similarity=0.221 Sum_probs=363.6 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHH-CCCCCCCC Q ss_conf 99999999999999999999879999899999999999999666459800156646379999999973111-02342014 Q gi|254780370|r 36 DKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIG-SIAGKMHT 114 (473) Q Consensus 36 D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~~edvh~~iE~~l~~~~G-~~~~~lH~ 114 (473) T Consensus 21 e~~~~~~~l~vE~ala~a~~~~g~ip~~~a~~i~~~~~~~~~d~~~i~~~e~~~~hdv-~a~v~~l~e~~~~~~~~~vH~ 99 (449) T PRK08540 21 EENKLQKMLEVEAALARAEAELGMIPKEAAEEINEKASTKSVKLERVKEIEAEIHHDI-MAVVKAISEVCEGDAGEYVHF 99 (449) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCH-HHHHHHHHHHCCHHHHCCEEC T ss_conf 8999999999999999999874999999999999864544478999999999848982-999999998644240030442 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 41011237887999999999999867788999997447730145200166530113344456788888878620698999 Q gi|254780370|r 115 ARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFD 194 (473) Q Consensus 115 grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~ 194 (473) T Consensus 100 G~Ts~Di~dTa~~L~~~~~~~~i~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rl~~ 179 (449) T PRK08540 100 GATSNDIIDTATALQLKDSLDILEEKLKTLLGVLLDKAEEHKNTVCIGRTHGQHAVPTTYGMKFAIWASEIQRHIERLEQ 179 (449) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 87788789889999999999999999999999999999982698620567884103316999999999999999999999 Q ss_pred HHHHHHHHHHHHHCCCCCCCCC----CHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 8745423356532033566678----998963103876434785673027886424677768876648999999999841 Q gi|254780370|r 195 SIERLDECPLGAAALAGTSFPI----DRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST 270 (473) Q Consensus 195 ~~~~~~~~pLG~~A~~GT~~~i----dr~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss 270 (473) T Consensus 180 ~~~~~~~~~~~GAvGt~a~~~~~~~~~~~~~~~~Lgl~~~~~~--~~~~~rd~~~e~~~~l~~ia~~l~kia~Di~~l~~ 257 (449) T PRK08540 180 LKPRVCVGQMTGAVGTQAAFGEKGIEIQKRVMEILGLGPVDIS--NQVIQRDRHAEFMMFLANIASTLDKIGLEIRSLQR 257 (449) T ss_pred HHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9998874123587664001697459999999998389977864--32123007999999999987369999999999752 Q ss_pred CCCCCEECC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHH---HHHHHHHHHHHHH Q ss_conf 245615404-554565300444336013899876689997523358767404840000100100---5579889999998 Q gi|254780370|r 271 PQFNFVRLS-DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQED---KEPVFDALETLQI 346 (473) Q Consensus 271 ~e~~~i~l~-~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~---~~~l~~ai~~~~~ 346 (473) T Consensus 258 ~e~ge~~e~~~~~~~GSS~MPhK~NPv~~E~i~gla~~~~~~~~~---~l~~~~~~~erDl~~~~~e~~~l~~~~~l~~~ 334 (449) T PRK08540 258 TEIGEVEESFGKKQVGSSTMPHKRNPITSEQVCGLARVVRSNVEP---ALLNNPLWDERDLTNSSCERVIFPESCVLTDH 334 (449) T ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 345703047899997138889872854689899999999988899---87257410010101247888867999999999 Q ss_pred HHHHHHHHHCCCEECCCHHHHCCC--CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHH Q ss_conf 656765230586665210121123--784439999999998539997999999999999999829896898999999400 Q gi|254780370|r 347 IILAISAMIEDLTVNKDRLQEAAT--KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQIS 424 (473) Q Consensus 347 ~L~l~~~li~~l~vn~erm~~~~~--~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~ 424 (473) T Consensus 335 ~l~~~~~~l~~l~vn~erm~~nl~~~~~~i~ae~l~~~L~~-~glg~~~Ahe~v~~~a~~A~~~g~~l~e~~l~~~~~~~ 413 (449) T PRK08540 335 ILKLMIKVLEGLEFNPENIRRNLELTKGLNMAERVMIELAK-RGMGRQEAHELVRQAAMKAFEEGRHLKEVLLEEPEVMK 413 (449) T ss_pred HHHHHHHHHHCCEECHHHHHHHHHHCCCHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHC T ss_conf 99999987751835699999998855177668999999998-59987999999999999999969989999865855316 Q ss_pred HCCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH Q ss_conf 1132689996599999962148999998999999999999999 Q gi|254780370|r 425 PVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQ 467 (473) Q Consensus 425 ~~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~~i~~~r~~L~ 467 (473) T Consensus 414 ~l~~~el~~lldP~~yi-------G~A~~~v~~vl~~~~~~~~ 449 (449) T PRK08540 414 YLTEEEIEELLDPETYI-------GTAPEIVENVIEKLREWEK 449 (449) T ss_pred CCCHHHHHHHCCHHHHC-------CCHHHHHHHHHHHHHHHHC T ss_conf 89999999866998716-------8489999999999998749 |
|
>cd01597 pCLME pCLME: prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like This group contains proteins similar to pCLME, a member of the Lyase class I family | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=610.65 Aligned_cols=424 Identities=22% Similarity=0.224 Sum_probs=365.6 Q ss_pred CCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC Q ss_conf 64223202333203323843469999842550789999999999999999999987999989999999999999966645 Q gi|254780370|r 2 SKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVD 81 (473) Q Consensus 2 ~~~~~~~~~~~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~ 81 (473) T Consensus 3 ~~~y~~~e~~~i~s--------------------~~~~i~~~~~ve~A~A~a~~~lG~ip~~~a~~I~~a~~~~~~d~~~ 62 (437) T cd01597 3 GDLFGTPAMREIFS--------------------DENRVQAMLDVEAALARAQAELGVIPKEAAAEIAAAADVERLDLEA 62 (437) T ss_pred CCCCCCHHHHHHCC--------------------HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH T ss_conf 43338899998729--------------------1999999999999999999876999999999999872764679999 Q ss_pred CCEECCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 98001566463799999999731110-23420144101123788799999999999986778899999744773014520 Q gi|254780370|r 82 GSFVFSRDLEDIHMNIEARLTSLIGS-IAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIM 160 (473) Q Consensus 82 ~~~~~~~~~edvh~~iE~~l~~~~G~-~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m 160 (473) T Consensus 63 ~~~~~~~~~~~v-~a~v~~l~~~~~~~~g~~vH~G~TsnDv~~Ta~~l~l~~~~~~l~~~l~~l~~~L~~~A~~~~~~~~ 141 (437) T cd01597 63 LAEATARTGHPA-IPLVKQLTAACGDAAGEYVHWGATTQDIIDTALVLQLRDALDLLERDLDALLDALARLAATHRDTPM 141 (437) T ss_pred HHHHHHHCCCCH-HHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE T ss_conf 999998728828-9999999985681302755799785313866999999988999999999999999999998259820 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----HHHHHHHCCCCCCCCCHHH Q ss_conf 016653011334445678888887862069899987454233565320335666789----9896310387643478567 Q gi|254780370|r 161 PGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPID----RHFTAKELGFREPTRNSID 236 (473) Q Consensus 161 pg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~id----r~~~a~~LGf~~~~~ns~d 236 (473) T Consensus 142 ~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rl~~~~~~~~~~~lgGAvGt~~~~~~~~~~~~~~~a~~Lgl~~~~~~--- 218 (437) T cd01597 142 VGRTHLQHALPITFGLKVAVWLSELLRHRERLDELRPRVLVVQFGGAAGTLASLGDQGLAVQEALAAELGLGVPAIP--- 218 (437) T ss_pred ECCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC--- T ss_conf 14446741343419999999999999999999999997764356766454545786379999999999489999986--- Q ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 3027886424677768876648999999999841245615404554-565300444336013899876689997523358 Q gi|254780370|r 237 SVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAF-STGSSIMPQKRNPDGAELVRAKTGRINGALLSL 315 (473) Q Consensus 237 av~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~-~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~ 315 (473) T Consensus 219 ~~~~rd~~~e~~~~l~~la~~L~kia~Di~ll~~~~~gei~~p~~~~~~GSS~MP~K~NPv~~E~v~~~a~~v~g~~~~~ 298 (437) T cd01597 219 WHTARDRIAELASFLALLTGTLGKIARDVYLLMQTEIGEVAEPFAKGRGGSSTMPHKRNPVGCELIVALARRVPGLAALL 298 (437) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 54353899999999999988899999999999874330421543589988788899879788999999999998779999 Q ss_pred HHHHHCCCCHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCC--CCCCHHHHHHHHHHHHCCCC Q ss_conf 767404840000100---1005579889999998656765230586665210121123--78443999999999853999 Q gi|254780370|r 316 LTIMKGLPLAYSKDM---QEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT--KSHSTATDLADWLVSHAGLP 390 (473) Q Consensus 316 ~~~~~~~p~~~~rDl---q~~~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~--~~~~~AT~lAd~Lv~~~Gip 390 (473) T Consensus 299 ~~---~~~~~~Erd~~~~~~~~~~l~~~~~l~~~~l~~~~~~l~~l~vn~erm~~nl~~~~~~i~ae~~~~~L~~--~ig 373 (437) T cd01597 299 LD---AMVQEHERDAGAWHAEWIALPEIFLLASGALEQAEFLLSGLEVNEDRMRANLDLTGGLILSEAVMMALAP--KLG 373 (437) T ss_pred HH---HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHCCCHHHHHHHHHHHHH--CCC T ss_conf 98---7675421054625778988999999999999999987511535599999999856268989999999863--389 Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHH Q ss_conf 79999999999999998298968989999994001132689996599999962148999998999999999 Q gi|254780370|r 391 FREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTY 461 (473) Q Consensus 391 FReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~~i~~ 461 (473) T Consensus 374 ~~~Ahe~v~~~a~~A~~~g~~l~e~~~~d~~~~~~l~~~el~~lldP~~~i-------G~a~~~v~~~~~r 437 (437) T cd01597 374 RQEAHDLVYEACMRAVEEGRPLREVLLEDPEVAAYLSDEELDALLDPANYL-------GSAPALVDRVLAR 437 (437) T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCHHHHHHHCCHHHHC-------CCHHHHHHHHHCC T ss_conf 899999999999999997988999986485643799999999872998773-------9689999999729 |
Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms. |
>PRK08470 adenylosuccinate lyase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=568.29 Aligned_cols=414 Identities=18% Similarity=0.222 Sum_probs=346.0 Q ss_pred CCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH-------HH Q ss_conf 96422320233320332384346999984255078999999999999999999998799998999999999-------99 Q gi|254780370|r 1 MSKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEG-------LK 73 (473) Q Consensus 1 m~~~~~~~~~~~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~a-------l~ 73 (473) T Consensus 1 mi~Ry~~~em~~ifs--------------------~e~~~~~~l~vE~ala~Aqa~lG~IP~~aa~~I~~~~~~d~~~i~ 60 (442) T PRK08470 1 MVERYAREEMAKKWT--------------------MQAKYDAWLEVEKAAVKAWNKLGLIPDSDCEKICKNAKFDIARID 60 (442) T ss_pred CCCCCCCHHHHHHCC--------------------HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHH T ss_conf 986428799998839--------------------389999999999999999987699999999999985799999999 Q ss_pred HHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99966645980015664637999999997311102342014410112378879999999999998677889999974477 Q gi|254780370|r 74 VIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAE 153 (473) Q Consensus 74 ~i~~~~~~~~~~~~~~~edvh~~iE~~l~~~~G~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~ 153 (473) T Consensus 61 ~~e~~t~----------hdv-ia~v~~l~~~~g~~~~~vH~GaTSqDi~DTa~~L~lk~al~~i~~~l~~l~~~L~~lA~ 129 (442) T PRK08470 61 EIEKTTK----------HDL-IAFLTSVSESLGEESRFVHYGMTSSDCIDTAVALQMKDSLKLIIEDVKNLMEAIKKRAL 129 (442) T ss_pred HHHHHHC----------CCH-HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999859----------982-99999999856612270014857864999999999999999999999999999999999 Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-HHHHHHHCCCCC-CC Q ss_conf 3014520016653011334445678888887862069899987454233565320335666789-989631038764-34 Q gi|254780370|r 154 EHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPID-RHFTAKELGFRE-PT 231 (473) Q Consensus 154 ~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~id-r~~~a~~LGf~~-~~ 231 (473) T Consensus 130 ~~k~t~m~GRTh~q~A~PiTfG~k~a~w~~~l~r~~~rL~~~~~~~~~g~~~GAvGt~a~~~~~v~~~~a~~LGL~~~p~ 209 (442) T PRK08470 130 EHKNTLMVGRSHGIHGEPITFGLVLAIWYDEIKRHLKLLEHTMEVISVGKISGAMGNFAHAPLELEELVCEELGLKPAPV 209 (442) T ss_pred HHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC T ss_conf 85667355510656540467789999998998889999999987642022011214457785799999999689998875 Q ss_pred CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH Q ss_conf 785673027886424677768876648999999999841245615404-5545653004443360138998766899975 Q gi|254780370|r 232 RNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLS-DAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 (473) Q Consensus 232 ~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~-~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g 310 (473) T Consensus 210 ~---~q~~~Rd~~ae~~~~La~ia~sl~Kia~di~~l~~tev~Ev~E~f~~gq~GSSaMPhKrNPi~~E~i~~lar~~r~ 286 (442) T PRK08470 210 S---NQVIQRDRYARLASALALLASSCEKIAVNIRHLQRTEVYEAEEYFSPGQKGSSAMPHKRNPVLSENITGLCRVIRS 286 (442) T ss_pred C---CCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 2---3020210899999999999988999999999861256324523568989853778855074989999999987787 Q ss_pred HHHHHHHHHHCCCCHHCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCC--CCCCCHHHHHHHHHHH Q ss_conf 233587674048400001001005---57988999999865676523058666521012112--3784439999999998 Q gi|254780370|r 311 ALLSLLTIMKGLPLAYSKDMQEDK---EPVFDALETLQIIILAISAMIEDLTVNKDRLQEAA--TKSHSTATDLADWLVS 385 (473) Q Consensus 311 ~~~~~~~~~~~~p~~~~rDlq~~~---~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~--~~~~~~AT~lAd~Lv~ 385 (473) T Consensus 287 ~~~---~~~e~~~~~hERd~~~s~~Er~~lpd~~~l~~~~l~~~~~vl~~L~V~~~rM~~NL~~t~gli~se~vm~~L~- 362 (442) T PRK08470 287 FVT---PALENVALWHERDISHSSVERFILPDAFITADFMLSRLNNVIENLVVYPENMMKNLNLTGGLVFSQRVLLELP- 362 (442) T ss_pred HHH---HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHCCHHHHHHHHHHHH- T ss_conf 678---9998617862768740176887899999999999999998760378868999999998668279999999998- Q ss_pred HCCCCHHHHHHHHHHHHHHHHHCCCC------------HHHCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCHH Q ss_conf 53999799999999999999982989------------689899999940011326899965999999621489999989 Q gi|254780370|r 386 HAGLPFREAHYITGCTVSLAEKNQCE------------LAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAA 453 (473) Q Consensus 386 ~~GipFReAH~iVg~lV~~A~~~g~~------------l~el~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGtap~ 453 (473) T Consensus 363 ~~G~~R~~Ah~~V~~~a~~~~~~~~~~~~~~~~~~~~~f~~~l~~d~~v~~~ls~~el~~l~dp~~yl-------~~~~~ 435 (442) T PRK08470 363 KKGVSREDAYKIVQRNAMKVWEDLQQGKAAINEKGESLFLQALLNDEELRKSLSEEEIRACFDYSYYT-------KNVDA 435 (442) T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCCHHHHHHHHCHHHHH-------HHHHH T ss_conf 87999999999999999999997541103442024305899987497988039999999871989998-------72889 Q ss_pred HHHHHH Q ss_conf 999999 Q gi|254780370|r 454 EVLKQV 459 (473) Q Consensus 454 ~V~~~i 459 (473) T Consensus 436 i~~rvl 441 (442) T PRK08470 436 IFKRVF 441 (442) T ss_pred HHHHHC T ss_conf 999861 |
|
>PRK07380 adenylosuccinate lyase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=564.73 Aligned_cols=409 Identities=20% Similarity=0.251 Sum_probs=352.0 Q ss_pred CCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH-------HH Q ss_conf 96422320233320332384346999984255078999999999999999999998799998999999999-------99 Q gi|254780370|r 1 MSKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEG-------LK 73 (473) Q Consensus 1 m~~~~~~~~~~~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~a-------l~ 73 (473) T Consensus 1 mi~RY~~~em~~ifs--------------------d~~~~~~~l~vE~Ala~aqa~lG~IP~~aa~~I~~~~~~d~~~i~ 60 (431) T PRK07380 1 MIERYTLPEMGNIWT--------------------DTAKFQTWLDVEIAACEAQAELGKIPEEAVEEIKAKANFDPQRIL 60 (431) T ss_pred CCCCCCCHHHHHHCC--------------------HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHH T ss_conf 987648799998739--------------------389999999999999999987699999999999986699999999 Q ss_pred HHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99966645980015664637999999997311102342014410112378879999999999998677889999974477 Q gi|254780370|r 74 VIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAE 153 (473) Q Consensus 74 ~i~~~~~~~~~~~~~~~edvh~~iE~~l~~~~G~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~ 153 (473) T Consensus 61 ~~e~~~~----------h~v-~a~v~~l~~~~g~~~~~vH~GaTSqDI~DTa~~L~lr~al~~i~~~L~~l~~~L~~la~ 129 (431) T PRK07380 61 EIEAEVR----------HDV-IAFLTNVNEYVGDAGRYIHLGMTSSDVLDTGLALQLKASVDLLLEELEDLIQAIRYLAR 129 (431) T ss_pred HHHHHHC----------CCC-HHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9998729----------897-99999999856301182554867743787799999999999999999999999999999 Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---HHHHHHHCCCCCC Q ss_conf 3014520016653011334445678888887862069899987454233565320335666789---9896310387643 Q gi|254780370|r 154 EHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPID---RHFTAKELGFREP 230 (473) Q Consensus 154 ~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~id---r~~~a~~LGf~~~ 230 (473) T Consensus 130 ~~~~t~m~GRTh~q~A~PiTfG~k~a~w~~~l~r~~~RL~~~~~~~~~~~l~GAv--Gt~a~~~~~~e~~~~~~LgL~~~ 207 (431) T PRK07380 130 EHRNTVMIGRSHGIHAEPITFGFKLAGWLAETLRNRERLVRLREDVAVGQISGAV--GTYANTDPRVEAITCQKLGLKPD 207 (431) T ss_pred HCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHHHHCCCCCC T ss_conf 8279743578634625115899999999999999999999999853121013112--44220250899999997699999 Q ss_pred CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC---CCCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 4785673027886424677768876648999999999841245615404554---5653004443360138998766899 Q gi|254780370|r 231 TRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAF---STGSSIMPQKRNPDGAELVRAKTGR 307 (473) Q Consensus 231 ~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~---~~GSSiMPqKrNP~~~E~ir~~a~~ 307 (473) T Consensus 208 ~~~~--q~~~Rd~~ae~~~~La~i~~~l~kia~di~~l~~~ei~Ev--~E~~~~gq~GSStMPhKrNPi~~E~i~~lar~ 283 (431) T PRK07380 208 TAST--QVISRDRHAEYVQTLALVGASLERFATEIRNLQRTDVLEV--EEYFAKGQKGSSAMPHKRNPIRSERLSGLARV 283 (431) T ss_pred CCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE--ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH T ss_conf 9867--7207199999999999999999999999999871686336--31568998912887856285889999999998 Q ss_pred HHHHHHHHHHHHHCCCCHHCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCC--CCCCHHHHHHHH Q ss_conf 97523358767404840000100100---5579889999998656765230586665210121123--784439999999 Q gi|254780370|r 308 INGALLSLLTIMKGLPLAYSKDMQED---KEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT--KSHSTATDLADW 382 (473) Q Consensus 308 ~~g~~~~~~~~~~~~p~~~~rDlq~~---~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~--~~~~~AT~lAd~ 382 (473) T Consensus 284 ~r~~~~~~---l~~~~~~hERD~~~s~~Er~~lp~~~~~~~~~l~~~~~ll~~L~V~~~~M~~Nl~~~~gli~se~vm~~ 360 (431) T PRK07380 284 LRSYVVAA---LENVALWHERDISHSSVERVMLPDCSILLHFMLREMTDLVKNLGVYPENMRRNMNIYGGVVFSQRVLLA 360 (431) T ss_pred HHHHHHHH---HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHCCHHHHHHHHHH T ss_conf 88757889---975088606782434547867889999999999999998606889799999999882787899999999 Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHH-HCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHH Q ss_conf 998539997999999999999999-829896898999999400113268999659999996214899999899999 Q gi|254780370|r 383 LVSHAGLPFREAHYITGCTVSLAE-KNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLK 457 (473) Q Consensus 383 Lv~~~GipFReAH~iVg~lV~~A~-~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~ 457 (473) T Consensus 361 L~~-~g~gR~~Ah~~v~~~a~~a~~~e~~~l~e~l~~d~~v~~~ls~~ei~~~~dP~~yl-------g~~~~i~~R 428 (431) T PRK07380 361 LVE-KGMSREEAYRLVQKNAHQAWNTEGGNFRANLEADPEVTALLSAEELADCFDPQLHL-------KNLDVIWQR 428 (431) T ss_pred HHH-CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHCCHHHHHHHHCHHHHH-------HCHHHHHHH T ss_conf 988-69988999999999999999864998899987396988419999999873989888-------473478784 |
|
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=556.33 Aligned_cols=407 Identities=20% Similarity=0.182 Sum_probs=345.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH-------HHHHHHHCCCEECCCCCCHHHHHHHHHHHHHH--- Q ss_conf 99999999999999999999879999899999999999-------99966645980015664637999999997311--- Q gi|254780370|r 36 DKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLK-------VIRAEIVDGSFVFSRDLEDIHMNIEARLTSLI--- 105 (473) Q Consensus 36 D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~-------~i~~~~~~~~~~~~~~~edvh~~iE~~l~~~~--- 105 (473) T Consensus 23 ~~~~~~~~l~vE~Ala~Aqa~lG~IP~~aa~~I~~~~~~~~~d~~~~~~~~~~~~h-------~v-i~~V~~l~~~~~~~ 94 (452) T PRK09053 23 DRATVQRMLDFEAALARAEAACGVIPAAAVAPIEAACDAERLDLDALAQAAALAGN-------LA-IPLVKQLTAQVAAR 94 (452) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC-------CC-HHHHHHHHHHHHHC T ss_conf 38999999999999999998769999999999998614446899999999988278-------74-89999999987302 Q ss_pred -HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf -1023420144101123788799999999999986778899999744773014520016653011334445678888887 Q gi|254780370|r 106 -GSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEM 184 (473) Q Consensus 106 -G~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~ 184 (473) T Consensus 95 ~~~a~~~vH~GaTS~Di~DTa~~L~l~~al~~l~~~l~~l~~~L~~lA~~~~~t~m~GRTH~Q~A~P~TfG~k~a~w~~~ 174 (452) T PRK09053 95 DAEAARYVHWGATSQDIIDTGLVLQLRDALDLLEPDLDRLCAALATLAARHRATPMIGRTWLQQALPVTLGLKFAGWLDA 174 (452) T ss_pred CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH T ss_conf 75201111578767459999999999999999999999999999999998627720020147867331399999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----HHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH Q ss_conf 862069899987454233565320335666789----9896310387643478567302788642467776887664899 Q gi|254780370|r 185 FGRDISRFFDSIERLDECPLGAAALAGTSFPID----RHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSR 260 (473) Q Consensus 185 l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~id----r~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~r 260 (473) T Consensus 175 l~r~~~rL~~~~~~~~~~~lgGAvGt~a~~~~~~~~v~~~la~~Lgl~~~~~---~~~~~rd~~~e~~~~L~~ia~~l~k 251 (452) T PRK09053 175 LLRHRQRLAALRPRALVLQFGGAAGTLASLGERALAVAQALAEELQLALPAL---PWHTQRDRIVEFASALGLLAGTLGK 251 (452) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999888871377446444677540999999999868998888---7521359999999999999988999 Q ss_pred HHHHHHHHHCCCCCCEECCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHH---HHHH Q ss_conf 99999998412456154045-5456530044433601389987668999752335876740484000010010---0557 Q gi|254780370|r 261 LAEEIILWSTPQFNFVRLSD-AFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQE---DKEP 336 (473) Q Consensus 261 la~Dl~~~ss~e~~~i~l~~-~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~---~~~~ 336 (473) T Consensus 252 ia~Dirll~~~eigEl~E~~~~~q~GSS~MPhK~NPv~~E~i~~lar~v~~~~~~~~---~~~~~~hERd~~~~~~e~~~ 328 (452) T PRK09053 252 IARDVSLLMQTEVGEVFEPAAAGKGGSSTMPHKRNPVGCAAVLTAATRAPGLVATLF---AAMVQEHERALGGWHAEWDT 328 (452) T ss_pred HHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---HHHHHHHCCCCCHHHHHHHH T ss_conf 999999986076574525678999875778876166989999999999997699999---87477512244227899999 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCC--CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHH Q ss_conf 9889999998656765230586665210121123--78443999999999853999799999999999999982989689 Q gi|254780370|r 337 VFDALETLQIIILAISAMIEDLTVNKDRLQEAAT--KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAK 414 (473) Q Consensus 337 l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~--~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~e 414 (473) T Consensus 329 lp~~~~l~~~~l~~~~~~l~gL~v~~~~M~~nL~~~~gli~sE~v~~aL~~~--~Gr~~Ahe~V~~~a~~A~~~~~~l~e 406 (452) T PRK09053 329 LPELACLAAGALAQMAQIVEGLEVDAARMRANLDLTHGLILAEAVMLALADR--IGRLDAHHLVEQASKRAVAQGRHLRD 406 (452) T ss_pred HHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHCCCHHH T ss_conf 9999999999999999998538777999999998715678899999998861--79999999999999999997988999 Q ss_pred CCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHH Q ss_conf 899999940011326899965999999621489999989999999999999 Q gi|254780370|r 415 LPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNR 465 (473) Q Consensus 415 l~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~~i~~~r~~ 465 (473) T Consensus 407 ~l~~d~~v~~~Ls~~eld~lldP~~yl-------G~a~~~vdrvla~~~~~ 450 (452) T PRK09053 407 VLAEDPQVSAHLSPAALDRLLDPAHYL-------GQARAWVDRVLAEHASR 450 (452) T ss_pred HHHCCHHHHCCCCHHHHHHHHCHHHHH-------CCHHHHHHHHHHHHHHC T ss_conf 987194866349999999882999770-------85499999999986622 |
|
>PRK08937 adenylosuccinate lyase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=542.85 Aligned_cols=413 Identities=22% Similarity=0.242 Sum_probs=348.2 Q ss_pred CCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH----HHHH Q ss_conf 964223202333203323843469999842550789999999999999999999987999989999999999----9999 Q gi|254780370|r 1 MSKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGL----KVIR 76 (473) Q Consensus 1 m~~~~~~~~~~~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al----~~i~ 76 (473) T Consensus 1 ~~~ry~~~em~~i~s--------------------~~~~~~~~l~vE~ala~aq~~~G-Ip~~~~~~i~~~~~~d~~~~~ 59 (425) T PRK08937 1 MISRYSSQEMSAIWS--------------------DENKFTTWLELEIAIAEAQAELG-IPKEDLESIREKAKFDIDRIL 59 (425) T ss_pred CCCCCCCHHHHHHHC--------------------HHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHCCCCHHHHH T ss_conf 986428799998809--------------------28999999999999999998849-899999999986589999999 Q ss_pred HHHHCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 66645980015664637999999997311102342014410112378879999999999998677889999974477301 Q gi|254780370|r 77 AEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHH 156 (473) Q Consensus 77 ~~~~~~~~~~~~~~edvh~~iE~~l~~~~G~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~ 156 (473) T Consensus 60 ~~e~~-------~~h~v-~a~v~~l~~~~~~~~~~vH~G~TSqDi~DTa~~l~l~~a~~~l~~~l~~l~~~L~~la~~~~ 131 (425) T PRK08937 60 EIEKE-------TRHDV-VAFIRALAEKLGEDRKFIHYGLTSTDVVDTALAYLLKEALELIARELEAFIDGLAEDAKEYK 131 (425) T ss_pred HHHHH-------HCCCC-HHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 99999-------69796-99999999866633361352531663588999999999999999999999999999999853 Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCHHHHHHHCCCCCCCCCHH Q ss_conf 4520016653011334445678888887862069899987454233565320335666-789989631038764347856 Q gi|254780370|r 157 NTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSF-PIDRHFTAKELGFREPTRNSI 235 (473) Q Consensus 157 ~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~-~idr~~~a~~LGf~~~~~ns~ 235 (473) T Consensus 132 ~t~m~grTh~Q~A~P~T~G~~~a~~~~~l~r~~~rl~~~~~~~~~~~~~GavGt~~~~~~~~~~~~a~~LGl~~~--~~~ 209 (425) T PRK08937 132 LLVMLGRTHGVHAEPTTLGIKIALWYQEMKRNLERLKEALDRLEVRKISGAVGTYANLSDLLEKYVALKLGLDPD--EIS 209 (425) T ss_pred CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC--CCC T ss_conf 774235753780867659999999999999999999999988876345620120124688999999987699999--875 Q ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 73027886424677768876648999999999841245615404554565300444336013899876689997523358 Q gi|254780370|r 236 DSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSL 315 (473) Q Consensus 236 dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~ 315 (473) T Consensus 210 ~~~~~Rd~~~e~~~~l~~~~~~l~kia~Di~~l~~~ee~~e~~-~~~~~GSS~MPhK~NPi~~E~~~~lar~~~~~~~~~ 288 (425) T PRK08937 210 TQVLPRDRHLEYIVALAIIAASTEKFAREIRLLQRSEEVEEGF-NKGQKGSSAMPHKRNPIGSERVTGLARVLRSYLATA 288 (425) T ss_pred CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 1140363599999999999989999999999995789678746-999987677785618588999999999998768999 Q ss_pred HHHHHCCCCHHCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCC--CCCHHHHHHHHHHHHCCCC Q ss_conf 7674048400001001---0055798899999986567652305866652101211237--8443999999999853999 Q gi|254780370|r 316 LTIMKGLPLAYSKDMQ---EDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATK--SHSTATDLADWLVSHAGLP 390 (473) Q Consensus 316 ~~~~~~~p~~~~rDlq---~~~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~~--~~~~AT~lAd~Lv~~~Gip 390 (473) T Consensus 289 ~~~~---~~~~e-d~~~~~~e~~~lp~~~~~~~~~l~~~~~~l~~L~v~~e~m~~nl~~~~g~i~ae~~~~~l~-~~glg 363 (425) T PRK08937 289 AENV---PLWHE-DISHSSAERIILPDAFLALDYALRRFSNLLDNLEVYPENMERNIRQEFGFIATQRVLLALV-EKGLG 363 (425) T ss_pred HHHH---HHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHH-HCCCC T ss_conf 9987---60263-4444435674589999999999999999887741459999999998456787999999998-75999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHH Q ss_conf 799999999999999982989689899999940011326899965999999621489999989999999 Q gi|254780370|r 391 FREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQV 459 (473) Q Consensus 391 FReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~~i 459 (473) T Consensus 364 r~~Ahe~v~~~a~~a~~~~~~l~e~l~~~~-~~-~ls~eeld~~ldP~~yl-------G~a~~i~drv~ 423 (425) T PRK08937 364 REDAYELVQESAMESWQKQGDLRPLLHADK-SI-ILSKEELEEAFDPKKFI-------GAVDEIFKRVG 423 (425) T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHCC-CC-CCCHHHHHHHCCHHHHH-------CCHHHHHHHHC T ss_conf 799999999999999987988999996299-88-99999999871999886-------62899999865 |
|
>PRK06390 adenylosuccinate lyase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=539.36 Aligned_cols=421 Identities=18% Similarity=0.198 Sum_probs=350.5 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCC Q ss_conf 99999999999999999999879999899999999999999666459800156646379999999973111023420144 Q gi|254780370|r 36 DKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTA 115 (473) Q Consensus 36 D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~~edvh~~iE~~l~~~~G~~~~~lH~g 115 (473) T Consensus 21 e~~~~~~~l~vE~ala~aq~~~g~ip~~a~~~i~~~~~~~~~d~~~i~~~e~~t~hdv-~a~v~~l~e~~~~~~~~vH~G 99 (451) T PRK06390 21 DENRLRYMLKVEAAIAKAEYEYGIIPRDAFLDIKNAVDSNSVRLERVREIESEIKHDV-MALVEALSEQCSAGKNYVHFG 99 (451) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC-HHHHHHHHHHCCCCCCEEECC T ss_conf 7899999999999999999883999989999999975515678999999975608985-999999998613455746517 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 10112378879999999999998677889999974477301452001665301133444567888888786206989998 Q gi|254780370|r 116 RSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDS 195 (473) Q Consensus 116 rSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~ 195 (473) T Consensus 100 ~TSqDI~Dta~~L~lk~a~~~i~~~l~~~~~~L~~lA~~h~~t~m~gRTHgQ~A~PtTfG~k~a~w~~~l~r~~~rL~~~ 179 (451) T PRK06390 100 VTSNDINDTATALQIHDFVSIIKDDIKNLMETLIKLIDEYKDSPMMGRTHGQHASPITFGLKFAVYLDEMSRHLDRLTEM 179 (451) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 54642576899999999999999999999999999999851686423104762145179999999999999999999999 Q ss_pred HHHHHHHHHHHHCCCCCCCCCC----HHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 7454233565320335666789----989631038764347856730278864246777688766489999999998412 Q gi|254780370|r 196 IERLDECPLGAAALAGTSFPID----RHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTP 271 (473) Q Consensus 196 ~~~~~~~pLG~~A~~GT~~~id----r~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~ 271 (473) T Consensus 180 ~~~~~~~~~~GavGt~a~~~~~~~~v~~~~~~~LgL~~~~~--~tq~~~rd~~~e~~~~l~~i~~~l~kia~di~~l~~~ 257 (451) T PRK06390 180 GDRAFAGKVLGPVGTGAALGKDALDIQNRVMEILGIYSEIG--STQIVNRDRYIEYLSVINGISVTLEKIATEIRNLQRP 257 (451) T ss_pred HHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCC--CCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 98898504466565201038637999999999818998874--1000133099999999999989999999999998667 Q ss_pred CCCCEEC--CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHH---HHHHHHHHHHHHH Q ss_conf 4561540--4554565300444336013899876689997523358767404840000100100---5579889999998 Q gi|254780370|r 272 QFNFVRL--SDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQED---KEPVFDALETLQI 346 (473) Q Consensus 272 e~~~i~l--~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~---~~~l~~ai~~~~~ 346 (473) T Consensus 258 ei~Ev~E~f~~~~~~GSStMPhK~NPi~~E~i~~la~~~~~~~~~~~---~~~~~~~ERDl~~s~~er~~lp~~~~l~~~ 334 (451) T PRK06390 258 EIDEVSEYFDEESQVGSSSMPSKVNPINSENVVSLSRFIRSLIIPEY---EAGVTWHERDLTNSALERFTIPYASILIDY 334 (451) T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCCCHHHHHHHHHHHHHHHHHH T ss_conf 88899886033589877778876385878999999999997478887---630020046872348999889999999999 Q ss_pred HHHHHHHHHCCCEECCCHHHHCCCC-CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHH Q ss_conf 6567652305866652101211237-844399999999985399979999999999999998298968989999994001 Q gi|254780370|r 347 IILAISAMIEDLTVNKDRLQEAATK-SHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISP 425 (473) Q Consensus 347 ~L~l~~~li~~l~vn~erm~~~~~~-~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~ 425 (473) T Consensus 335 ~l~~~~~~l~~L~vn~e~m~~nL~~~~~i~sE~i~~~L~-~~g~~r~~Ahe~v~~~~~~a~~~g~~l~e~l~~~-~i~~~ 412 (451) T PRK06390 335 VLYNMNDVLSHLIIKEDEIRRNLESDDSIMSESIVRALT-LSGMPRQDAHEFVRRASMEARSNGKSLKSSLIEA-GILKY 412 (451) T ss_pred HHHHHHHHHCCCEECHHHHHHHHHCCCCHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHC-HHHHC T ss_conf 999999887468888999999886498748999999999-8099887899999999999998598789997506-03214 Q ss_pred CCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 1326899965999999621489999989999999999999998561 Q gi|254780370|r 426 VITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNIPK 471 (473) Q Consensus 426 ~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~~i~~~r~~L~~~~~ 471 (473) T Consensus 413 l~~~eld~~ldP~~Yl-------G~a~~lvd~vl~~~~~~~~~~~~ 451 (451) T PRK06390 413 IDEKTLDRAMDPANFI-------GQAPSICDNVVNNAERRMKDADE 451 (451) T ss_pred CCHHHHHHCCCHHHHH-------HHHHHHHHHHHHHHHHHHHCCCC T ss_conf 9999998736988876-------43999999999999998633599 |
|
>TIGR00928 purB adenylosuccinate lyase; InterPro: IPR004769 A number of enzymes, belonging to the lyase class, for which fumarate is a substrate have been shown , to share a short conserved sequence around a methionine which is probably involved in the catalytic activity of this type of enzymes | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=541.71 Aligned_cols=410 Identities=26% Similarity=0.343 Sum_probs=353.1 Q ss_pred CCCCCC--CCHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCCHHHHHHHHHH Q ss_conf 964223--2023332033238434699998425507899999999999999999999879-------9998999999999 Q gi|254780370|r 1 MSKKIK--SNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQG-------IISSEEAQKIIEG 71 (473) Q Consensus 1 m~~~~~--~~~~~~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~g-------ii~~~~~~~i~~a 71 (473) T Consensus 1 ~~~RY~~~~~EM~~iWs--------------------e~~k~~~~l~VE~a~~~A~a~lGP~I~~v~~i~~~~~~~~~~k 60 (469) T TIGR00928 1 LDERYGDKTPEMRAIWS--------------------EENKFKKWLDVEVALLRALAELGPVITEVPVIPAEAAKEIKEK 60 (469) T ss_pred CCCCCCCCCHHHHHHCC--------------------HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHCC T ss_conf 98765666635452206--------------------5789999999999999997410873010466438899998579 Q ss_pred ------------HHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHH------CCCCCCCCCCCHHHHHHHHHHHHHHHH Q ss_conf ------------99999666459800156646379999999973111------023420144101123788799999999 Q gi|254780370|r 72 ------------LKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIG------SIAGKMHTARSRNDQVALDLRLWIKEK 133 (473) Q Consensus 72 ------------l~~i~~~~~~~~~~~~~~~edvh~~iE~~l~~~~G------~~~~~lH~grSrND~~~t~~rl~lr~~ 133 (473) T Consensus 61 ~~a~~~~~~~~rikeIE~~t----------~HDv-~A~~~~l~E~~~~~~eL~~~~~~iH~G~TS~Di~Dta~aLllr~s 129 (469) T TIGR00928 61 IVASFDDVDLERIKEIEAVT----------KHDV-KAVVKALAEKCGEAVELGAEGEYIHFGATSNDIVDTALALLLRDS 129 (469) T ss_pred CEEEECHHHHHHHHHHHHHH----------CCHH-HHHHHHHHHHHHHHCCHHHCCEEEEECCCHHHHHHHHHHHHHHHH T ss_conf 52631456688687763232----------4529-989989977400000322235015314644448887899999998 Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf -9999867788999997447730145200166530113344456788888878620698999874542335653203356 Q gi|254780370|r 134 -TLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGT 212 (473) Q Consensus 134 -l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT 212 (473) T Consensus 130 ~~~ii~~~l~~l~~~L~~~A~e~kd~~m~GRTHGq~A~PtT~G~~~A~w~~E~~R~~~rL~~~~~~~~vg~i-~Ga~-GT 207 (469) T TIGR00928 130 RLEIILPKLKKLIDILKDKAEEHKDTVMLGRTHGQHAEPTTLGKKFALWADEMKRQLERLKQAKERIKVGGI-SGAV-GT 207 (469) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCC-CH T ss_conf 999879999999999999765309678841357824344869999999999999999999988861665742-2542-14 Q ss_pred CCCC------CH-------HHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC Q ss_conf 6678------99-------8963103876434785673027886424677768876648999999999841245615404 Q gi|254780370|r 213 SFPI------DR-------HFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLS 279 (473) Q Consensus 213 ~~~i------dr-------~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~ 279 (473) T Consensus 208 ~a~~~~~~~G~~~~~~~~E~~V~~~LGL~-~~~~stGQi~~RD~~a~~~~~LA~lA~~l~k~A~~iR~lq~~e~~ev~-- 284 (469) T TIGR00928 208 YAAAGPLGDGDRDWLEEVEERVTELLGLK-PVPISTGQIIQRDRHAELLDALALLAATLEKFAVEIRLLQRTEVLEVE-- 284 (469) T ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHEE-- T ss_conf 76234457885799999999999870872-256747620000456899999988604866864788997603620111-- Q ss_pred CCCC----CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHCCCHHHHHH---HHHHHHHHHHHHHHHH Q ss_conf 5545----653004443360138998766899975233587674048-4000010010055---7988999999865676 Q gi|254780370|r 280 DAFS----TGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGL-PLAYSKDMQEDKE---PVFDALETLQIIILAI 351 (473) Q Consensus 280 ~~~~----~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~-p~~~~rDlq~~~~---~l~~ai~~~~~~L~l~ 351 (473) T Consensus 285 E~F~P~gQ~GSSaMPHKrNPI~~E~~~GlaRv~r~~~~~~~---~~~p~lW~ERDlt~SsveR~~Lp~~~~~~d~~L~~~ 361 (469) T TIGR00928 285 EKFGPKGQVGSSAMPHKRNPIDSERVCGLARVIRSYVIPAL---ENVPVLWHERDLTDSSVERVILPDSFILADIILKTL 361 (469) T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 02468888777788899988416556579999999999999---708985002531111367888658999999999998 Q ss_pred HHHHCCCEECCCHHHHCCC--CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH------CCCCHHHCCHHHHHHH Q ss_conf 5230586665210121123--7844399999999985399979999999999999998------2989689899999940 Q gi|254780370|r 352 SAMIEDLTVNKDRLQEAAT--KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEK------NQCELAKLPLAMLQQI 423 (473) Q Consensus 352 ~~li~~l~vn~erm~~~~~--~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~------~g~~l~el~~~~~~~~ 423 (473) T Consensus 362 ~~~~~~L~vypeni~rnL~~~~gl~~~~~vl~~lv-~~G~gRe~aye~v~~~A~~a~~v~~e~~~~~~l~~~~~~~-~~~ 439 (469) T TIGR00928 362 LKVVKKLVVYPENIKRNLELTLGLIASERVLIALV-ERGMGREEAYEIVRELAMKAAEVLKEEVEERDLLEFLLED-EEI 439 (469) T ss_pred HHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC-CCC T ss_conf 75675034068899987300266002258999996-3158850168999999999999997316723689999727-456 Q ss_pred HHCC-CHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH Q ss_conf 0113-2689996599999962148999998999999 Q gi|254780370|r 424 SPVI-TSAVYDILKVESSISSRKSFGGTCAAEVLKQ 458 (473) Q Consensus 424 ~~~~-~~di~~~ldp~~~v~~R~s~GGtap~~V~~~ 458 (473) T Consensus 440 ~~~~~~~e~~~~~~P~~y~-------G~a~~~ve~v 468 (469) T TIGR00928 440 TKYLTEEELAELLDPETYI-------GNAREIVERV 468 (469) T ss_pred CCCCCHHHHHHHCCHHHHH-------CCHHHHHHHC T ss_conf 6125868999850936651-------4445554303 |
Adenylosuccinate lyase is involved in purine ribonucleotide biosynthesis.; GO: 0004018 adenylosuccinate lyase activity, 0009152 purine ribonucleotide biosynthetic process. |
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism] | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=509.16 Aligned_cols=416 Identities=24% Similarity=0.278 Sum_probs=356.7 Q ss_pred CCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH-------H Q ss_conf 964223202333203323843469999842550789999999999999999999987999989999999999-------9 Q gi|254780370|r 1 MSKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGL-------K 73 (473) Q Consensus 1 m~~~~~~~~~~~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al-------~ 73 (473) T Consensus 1 ~~~RY~~~em~~ifS--------------------~~~~~~~~l~vE~ala~A~aelG~Ip~~a~~~I~~~~~~~~~d~~ 60 (438) T COG0015 1 LDGRYSSPEMRAIFS--------------------EEAKLRAWLKVEAALARAQAELGVIPAEAAAEIDAAAAFAEFDLE 60 (438) T ss_pred CCCCCCCHHHHHHCC--------------------HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHH T ss_conf 985527689998748--------------------778999999999999999887099989999999987320315799 Q ss_pred HHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999666459800156646379999999973111-0234201441011237887999999999999867788999997447 Q gi|254780370|r 74 VIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIG-SIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKA 152 (473) Q Consensus 74 ~i~~~~~~~~~~~~~~~edvh~~iE~~l~~~~G-~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A 152 (473) T Consensus 61 ~i~eie~~t~-------HdV-~a~v~~l~e~~~~~~~~~VH~GaTS~DI~Dta~~L~lk~a~~ii~~~l~~l~~~L~~~A 132 (438) T COG0015 61 RIKEIEAETG-------HDV-KALVRALAEKVGEEASEYVHFGATSQDIIDTALALQLKEALDLILPDLKRLIEALAELA 132 (438) T ss_pred HHHHHHHHHC-------CCC-HHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999858-------885-99999999865621236245066668888589999999999999999999999999999 Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-C---HHHHHHHCCCC Q ss_conf 7301452001665301133444567888888786206989998745423356532033566678-9---98963103876 Q gi|254780370|r 153 EEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPI-D---RHFTAKELGFR 228 (473) Q Consensus 153 ~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~i-d---r~~~a~~LGf~ 228 (473) T Consensus 133 ~~~k~t~m~GRTHgq~A~PtT~G~k~A~w~~el~R~~~rL~~~~~~~~~g~i~Ga~Gt~Aa~~~~~~~ve~~v~e~LGL~ 212 (438) T COG0015 133 LEHKDTPMLGRTHGQPAEPTTFGKKFANWLAELLRHLERLEEAEERIIVGKIGGAVGTLAALGDLGAEVEERVAEKLGLK 212 (438) T ss_pred HHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHCCCC T ss_conf 98278811123467777540199999999999999999999998533530126632218635840589999999986999 Q ss_pred CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC---CCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 434785673027886424677768876648999999999841245615404554---56530044433601389987668 Q gi|254780370|r 229 EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAF---STGSSIMPQKRNPDGAELVRAKT 305 (473) Q Consensus 229 ~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~---~~GSSiMPqKrNP~~~E~ir~~a 305 (473) T Consensus 213 ~~p~st--q~~~RD~~ae~~~~La~i~~sl~k~a~dIr~l~~~e~~Ev--~E~f~~gq~GSSaMPHKrNPi~~E~~~gla 288 (438) T COG0015 213 PAPIST--QVSPRDRIAEFFSALALLAGSLEKFARDIRLLQRTEVGEV--EEPFAKGQVGSSAMPHKRNPIDSENVTGLA 288 (438) T ss_pred CCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHH T ss_conf 998876--5065368999999999999879999999999871374300--134678998778787466828889999999 Q ss_pred HHHHHHHHHHHHHHHCCCCHHCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCC--CCCCHHHHHH Q ss_conf 9997523358767404840000100100---5579889999998656765230586665210121123--7844399999 Q gi|254780370|r 306 GRINGALLSLLTIMKGLPLAYSKDMQED---KEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT--KSHSTATDLA 380 (473) Q Consensus 306 ~~~~g~~~~~~~~~~~~p~~~~rDlq~~---~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~--~~~~~AT~lA 380 (473) T Consensus 289 r~~r~~~~~~~e---~~~~whERdlt~ssver~~Lp~~~~~~~~aL~~~~~vl~~L~v~~~~m~~nL~~~~gli~se~v~ 365 (438) T COG0015 289 RVARALVSTLLE---NLVLWHERDLTDSSVERVILPDAFIAADGALNRLLNVLEGLEVNPERMRRNLDLTLGLIASERVM 365 (438) T ss_pred HHHHHHHHHHHH---HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHCCCHHHHHHHH T ss_conf 999998999999---86888723562047888788899999999999999999757667999998874324526439999 Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHH Q ss_conf 9999853999799999999999999982989689899999940011326899965999999621489999989999999 Q gi|254780370|r 381 DWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQV 459 (473) Q Consensus 381 d~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~~i 459 (473) T Consensus 366 ~~l~~-~g~~Re~a~elvr~~a~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~dp~~y~-------G~a~~i~~r~~ 436 (438) T COG0015 366 LALRK-KGMGREEAHELVREKAMKAWEQGKEFLELLLADERVTKYLSEEELLELLDPANYL-------GRADEIVERVV 436 (438) T ss_pred HHHHH-CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCCHHHHHHCCCHHHHH-------HHHHHHHHHHH T ss_conf 99886-4898999999999999999985032688861342533237688998717998875-------56999999874 |
|
>PRK12273 aspA aspartate ammonia-lyase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=456.70 Aligned_cols=417 Identities=23% Similarity=0.285 Sum_probs=347.2 Q ss_pred HHHCCCCCCCCHHHHHHHHCCC-HHHH--HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECC Q ss_conf 3320332384346999984255-0789--999999999999999999987999989999999999999966645980015 Q gi|254780370|r 11 NQMWGGRFSSSPSWIMEKINVS-IDFD--KKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFS 87 (473) Q Consensus 11 ~~lW~grf~~~~~~~~~~~~~s-~~~D--~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~ 87 (473) T Consensus 20 ~~~yG----aqTqRa~~NF~isg~~~~~~~~~I~A~~~iK~AaA~aN~~lg~L~~~~a~aI~~A~~ei~~G~~~~~Fpvd 95 (471) T PRK12273 20 DAYYG----IQTLRAVENFPISGVKISDYPELIRALAMVKKAAALANKELGLLDEEKADAIVAACDEILAGKLHDQFVVD 95 (471) T ss_pred CCCHH----HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE T ss_conf 67315----98999997769889888877899999999999999999982899999999999999999849862034020 Q ss_pred CCCC----HHHHHHHHHHH----HHHH-CCCCC--CC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 6646----37999999997----3111-02342--01------4410112378879999999999998677889999974 Q gi|254780370|r 88 RDLE----DIHMNIEARLT----SLIG-SIAGK--MH------TARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLD 150 (473) Q Consensus 88 ~~~e----dvh~~iE~~l~----~~~G-~~~~~--lH------~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~ 150 (473) T Consensus 96 v~QtGsGTstNMNvNEVIAnrA~e~lg~~~G~~~~vHPNDhVN~~QSsND~~PTA~~ia~~~~~~~L~pal~~L~~~l~~ 175 (471) T PRK12273 96 VIQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDAYPTAIRIALLLSLRKLLDALEQLIEAFEA 175 (471) T ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 10278876667628999999999993887788887483258763246666320899999999999999999999999999 Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-------HHH Q ss_conf 4773014520016653011334445678888887862069899987454233565320335666789989-------631 Q gi|254780370|r 151 KAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHF-------TAK 223 (473) Q Consensus 151 ~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~~-------~a~ 223 (473) T Consensus 176 Ka~~f~~iiK~GRTHLqDA~PitlGQef~aya~~l~~~~~rl~~~~~~l~~l~lGGTAV-GTGlna~~~f~~~v~~~L~~ 254 (471) T PRK12273 176 KAKEFADILKMGRTQLQDAVPMTLGQEFGAFAVALAEDIKRLEEAAELLREVNLGATAI-GTGINAPPGYAELVVKKLAE 254 (471) T ss_pred HHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCHHHHHHHHHHHH T ss_conf 99997323530520156653312077899999999999999999999987536875100-46778882089999999999 Q ss_pred HCCCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCEECCCCCCCCCCCCCCCCCCHHHH Q ss_conf 03876-434785673027886424677768876648999999999841---24561540455456530044433601389 Q gi|254780370|r 224 ELGFR-EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLSDAFSTGSSIMPQKRNPDGAE 299 (473) Q Consensus 224 ~LGf~-~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss---~e~~~i~l~~~~~~GSSiMPqKrNP~~~E 299 (473) T Consensus 255 ~tgl~f~~a~n~f~a~~~~D~~v~~sg~Lk~lA~~L~KIAnDlRlL~SGPr~GlgEi~LP-a~qpGSSIMPGKVNPv~~E 333 (471) T PRK12273 255 ITGLPLVPAEDLIEATQDCGAFVEVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLP-AVQAGSSIMPGKVNPVIPE 333 (471) T ss_pred HHCCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCC-CCCCCCCCCCCCCCCHHHH T ss_conf 978996457889999728819999999999999999999988888706876675400378-8999877789998967899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCEECCCHHHHCCCCCCCHHHH Q ss_conf 987668999752335876740484000010010055798899999986567652-3058666521012112378443999 Q gi|254780370|r 300 LVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISA-MIEDLTVNKDRLQEAATKSHSTATD 378 (473) Q Consensus 300 ~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~~~~l~~ai~~~~~~L~l~~~-li~~l~vn~erm~~~~~~~~~~AT~ 378 (473) T Consensus 334 ~~~mv~~qViGnd~aIt~A~~~G~~ELNv~~PlIa~nll~Si~lL~~a~~~f~~~ci~Gi~~n~e~~~~~l~~S~~lvTa 413 (471) T PRK12273 334 VVNQVCFQVIGNDLTVTMAAEAGQLQLNVMEPVIAYALFESISILTNACRTLREKCIDGITANEERCREYVENSIGIVTA 413 (471) T ss_pred HHHHHHHHHHCCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCHHHHHH T ss_conf 99999999974459999985455067651360999999999999999999999987565777899999999748324755 Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCC Q ss_conf 9999998539997999999999999999829896898999999400113268999659999996214899999 Q gi|254780370|r 379 LADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTC 451 (473) Q Consensus 379 lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGta 451 (473) T Consensus 414 L~p~I----G------Yd~aa~iak~A~~~g~slre~~le~----~~ls~~e~d~ildP~~mt----~pg~~~ 468 (471) T PRK12273 414 LNPYI----G------YENAAEIAKEALETGKSVRELVLER----GLLTEEELDDILSPENMT----HPGYKG 468 (471) T ss_pred CCCHH----C------HHHHHHHHHHHHHHCCCHHHHHHHC----CCCCHHHHHHHCCHHHHC----CCCCCC T ss_conf 34501----5------7999999999999299899999885----999999999866999847----999898 |
|
>PRK12425 fumarate hydratase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=441.11 Aligned_cols=417 Identities=17% Similarity=0.203 Sum_probs=347.2 Q ss_pred HHHHCCCCCCCCHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCC Q ss_conf 33320332384346999984255-07899999999999999999999879999899999999999999666459800156 Q gi|254780370|r 10 VNQMWGGRFSSSPSWIMEKINVS-IDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSR 88 (473) Q Consensus 10 ~~~lW~grf~~~~~~~~~~~~~s-~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~ 88 (473) T Consensus 16 ~d~~yG----~qT~Ra~~NF~is~~~~p~~~I~A~~~vKkAaA~aN~~~G~L~~~~~~aI~~Acdei~~g~~~~~Fpvdv 91 (464) T PRK12425 16 EDAYWG----AQTQRSLINFAIGKERMPLAVLHALALIKKAAARVNDRNGDLPADIARLIEQAADEVLDGQHDDQFPLVV 91 (464) T ss_pred CCCCHH----HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC T ss_conf 655304----9899999775888887999999999999999999999809999999999999999998599702488711 Q ss_pred CCC----HHHHHHHHHHH----HHHH-CCCCC--CC------CCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH Q ss_conf 646----37999999997----3111-02342--01------441011237887999999999-9998677889999974 Q gi|254780370|r 89 DLE----DIHMNIEARLT----SLIG-SIAGK--MH------TARSRNDQVALDLRLWIKEKT-LEITNDLKKLLTILLD 150 (473) Q Consensus 89 ~~e----dvh~~iE~~l~----~~~G-~~~~~--lH------~grSrND~~~t~~rl~lr~~l-~~l~~~l~~l~~~L~~ 150 (473) T Consensus 92 ~Q~GsGTstNMNvNEVIAnrA~e~lg~~~G~~~~vhPNDhVN~sQStND~~PTA~~ia~~~~l~~~L~pal~~L~~~l~~ 171 (464) T PRK12425 92 WQTGSGTQSNMNVNEVIAGRANELAGNGRGGKSPVHPNDHVNRSQSSNDCFPTAMHIAAAQAVHEQLLPAIAELSSGLAE 171 (464) T ss_pred EECCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 00798412005199999999999847777888875943223554567647877999999999999999999999999999 Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH-------HHHH Q ss_conf 477301452001665301133444567888888786206989998745423356532033566678998-------9631 Q gi|254780370|r 151 KAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRH-------FTAK 223 (473) Q Consensus 151 ~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~-------~~a~ 223 (473) T Consensus 172 Ka~ef~~iiK~GRThLqDAvP~tlGQef~~~a~~l~~~~~rl~~~~~~l~~l~lGgTAV-GTGina~~~f~~~~~~~L~~ 250 (464) T PRK12425 172 LSARHAKLVKTGRTHMMDATPITFGQELSAFVAQLDYAERAIRAALPAVYELAQGGTAV-GTGLNAPKGFAEAIAAELAA 250 (464) T ss_pred HHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHHHHHHH T ss_conf 99986133012634045567363788999999999999999999999999852776211-46888857699999999999 Q ss_pred HCCCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCEECCCCCCCCCCCCCCCCCCHHHH Q ss_conf 03876-434785673027886424677768876648999999999841---24561540455456530044433601389 Q gi|254780370|r 224 ELGFR-EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLSDAFSTGSSIMPQKRNPDGAE 299 (473) Q Consensus 224 ~LGf~-~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss---~e~~~i~l~~~~~~GSSiMPqKrNP~~~E 299 (473) T Consensus 251 ~tgl~~~~a~n~~~a~~~~d~~v~~sg~Lk~lA~~L~KIanDlRlL~SGPr~GlgEi~LP-~~qpGSSIMPGKVNPvi~E 329 (464) T PRK12425 251 LSGLPFVTAPNKFAALAGHEPLTSLSGALKTLAVALMKIANDLRLLGSGPRAGLAEVRLP-ANEPGSSIMPGKVNPTQCE 329 (464) T ss_pred HHCCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHH T ss_conf 749996347879999717868999999999999999999988777637865676512489-9999877789987988888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCEECCCHHHHCCCCCCCHHHH Q ss_conf 987668999752335876740484000010010055798899999986567652-3058666521012112378443999 Q gi|254780370|r 300 LVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISA-MIEDLTVNKDRLQEAATKSHSTATD 378 (473) Q Consensus 300 ~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~~~~l~~ai~~~~~~L~l~~~-li~~l~vn~erm~~~~~~~~~~AT~ 378 (473) T Consensus 330 ~v~qv~~qViGnd~tit~a~~~Gq~eLNv~~Plia~nll~Si~lL~~a~~~f~~~ci~Gi~~N~e~~~~~~~~S~~lvTa 409 (464) T PRK12425 330 ALSMLACQVMGNDATIGFAASQGHLQLNVFKPVIIHNLLQSIRLLADGCRNFNQHCVAGLEPDAEQMAAHLERGLMLVTA 409 (464) T ss_pred HHHHCCEEEECCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCHHHHHH T ss_conf 86527415454729999877604457642027888743679999999999999998762888899999999847568876 Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCC Q ss_conf 999999853999799999999999999982989689899999940011326899965999999621489999 Q gi|254780370|r 379 LADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGT 450 (473) Q Consensus 379 lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGt 450 (473) T Consensus 410 L~P~I----G------Y~~aa~Iak~A~~~g~sl~e~~le----~g~ls~ee~d~il~P~~m~----~pg~~ 463 (464) T PRK12425 410 LNPHI----G------YDKAAEIAKKAYAEGTTLREAALE----LGYLTEEQFDQWVRPENML----EAGGH 463 (464) T ss_pred CCCHH----C------HHHHHHHHHHHHHHCCCHHHHHHH----CCCCCHHHHHHHCCHHHHC----CCCCC T ss_conf 03401----6------699999999999939989999988----5999999999867999846----89999 |
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>PRK09285 adenylosuccinate lyase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=401.55 Aligned_cols=406 Identities=18% Similarity=0.182 Sum_probs=284.5 Q ss_pred CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC------HHHHHHHHHHHHHHHHHHHCCCEE--- Q ss_conf 33238434699998425507899999999999999999999879999------899999999999999666459800--- Q gi|254780370|r 15 GGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIIS------SEEAQKIIEGLKVIRAEIVDGSFV--- 85 (473) Q Consensus 15 ~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~------~~~~~~i~~al~~i~~~~~~~~~~--- 85 (473) T Consensus 13 DgRY~~~t~emr~ifS-----E~alik~r~~VEi~~l~aLa~~~~~~~i~~~~~~~~~~----l~~i~~~f~~~d~~~ik 83 (456) T PRK09285 13 DGRYASKVAALRPIFS-----EYGLIKYRVQVEVEWLQALAAEAGIPEVPPFSAEANAF----LRAIVENFSEEDAARIK 83 (456) T ss_pred CCCCCCCHHHHHHHCC-----HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH----HHHHHHCCCHHHHHHHH T ss_conf 5334355689998809-----78998999999999999998365557889989999999----99988438987899999 Q ss_pred --CCCCCCHHHHHHHHHHHHHHH------CCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHC Q ss_conf --156646379999999973111------02342014410112378879999999999-998677889999974477301 Q gi|254780370|r 86 --FSRDLEDIHMNIEARLTSLIG------SIAGKMHTARSRNDQVALDLRLWIKEKTL-EITNDLKKLLTILLDKAEEHH 156 (473) Q Consensus 86 --~~~~~edvh~~iE~~l~~~~G------~~~~~lH~grSrND~~~t~~rl~lr~~l~-~l~~~l~~l~~~L~~~A~~~~ 156 (473) T Consensus 84 eiE~~t~HDV-kAvey~i~~~~~~~~~~~~~~~~iH~G~TS~DI~dta~~L~lk~al~~vi~~~l~~l~~~L~~~a~~~~ 162 (456) T PRK09285 84 EIERTTNHDV-KAVEYFLKEKLAALPELEAVSEFIHFACTSEDINNLSHALMLKEAREEVLLPALREIIDALKALAHEYA 162 (456) T ss_pred HHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 9874417877-899999999998732000000005535358988726999999999999999999999999999999846 Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC------CC-CCC----HHHHHHHC Q ss_conf 45200166530113344456788888878620698999874542335653203356------66-789----98963103 Q gi|254780370|r 157 NTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGT------SF-PID----RHFTAKEL 225 (473) Q Consensus 157 ~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT------~~-~id----r~~~a~~L 225 (473) T Consensus 163 ~~~mlgRTHgQ~A~PtT~Gk~~a~~~~rl~r~~~rl~~~~---~~gKf~GAv--Gt~~A~~~~~p~~dw~~~~~~f~~~L 237 (456) T PRK09285 163 DVPMLSRTHGQPATPTTLGKEMANVAYRLERQIKQLAAVE---ILGKINGAV--GNYNAHLAAYPEVDWHAFSREFVTSL 237 (456) T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHCCCC--CCCHHHHHHCCCCCHHHHHHHHHHHC T ss_conf 5631000047666341279999999999999999999988---888844454--54046777547888899999999976 Q ss_pred CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE-ECCCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 876434785673027886424677768876648999999999841245615-4045545653004443360138998766 Q gi|254780370|r 226 GFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFV-RLSDAFSTGSSIMPQKRNPDGAELVRAK 304 (473) Q Consensus 226 Gf~~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i-~l~~~~~~GSSiMPqKrNP~~~E~ir~~ 304 (473) T Consensus 238 GL~~~~~tT--Qi~~~D~~ae~~~~l~~i~~~l~~l~~Di~~~is~--~~~~e~~~~gevGSStMPhKrNPI~~Enaegn 313 (456) T PRK09285 238 GLTWNPYTT--QIEPHDYIAELFDAVARFNTILIDLDRDVWGYISL--GYFKQKTKAGEIGSSTMPHKVNPIDFENSEGN 313 (456) T ss_pred CCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH T ss_conf 999888877--73663189999999999856799998999999987--77742468999715888745286035644348 Q ss_pred HHHHHHHHHHHHHHHHCCCC-HHCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCCCC-CHHHHHH Q ss_conf 89997523358767404840-00010010055--79889999998656765230586665210121123784-4399999 Q gi|254780370|r 305 TGRINGALLSLLTIMKGLPL-AYSKDMQEDKE--PVFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSH-STATDLA 380 (473) Q Consensus 305 a~~~~g~~~~~~~~~~~~p~-~~~rDlq~~~~--~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~~~~-~~AT~lA 380 (473) T Consensus 314 l~la~~l~~~~~---~~l~~sr~qRDLtdSt~~R~igva~~~~~ia~~~~~~gl~~L~vn~~~m~~nL~~~~~ilaEav~ 390 (456) T PRK09285 314 LGLANALLEHLA---AKLPISRWQRDLTDSTVLRNLGVAFGYSLIAYDSLLKGLSKLEVNEARLAADLDANWEVLAEPIQ 390 (456) T ss_pred HHHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCHHHHHHHHH T ss_conf 999999999998---74665787775237788888776899999999999987427079899999888508306799999 Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCC---CHHHHHHCCHHHHHHHCCCCCCCCHHHHHH Q ss_conf 99998539997999999999999999829896898999999400113---268999659999996214899999899999 Q gi|254780370|r 381 DWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVI---TSAVYDILKVESSISSRKSFGGTCAAEVLK 457 (473) Q Consensus 381 d~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~---~~di~~~ldp~~~v~~R~s~GGtap~~V~~ 457 (473) T Consensus 391 ~~l-r~~g~~--~ayE~~k~ltr-----g~~~~~~~l~~~~~~l~~~~~~k~~L-~~L~P~~Yi-------G~A~~~vd~ 454 (456) T PRK09285 391 TVM-RRYGIE--NPYEKLKELTR-----GKRITAEALQEFIDGLDLPEEAKARL-KALTPANYI-------GLAAELADE 454 (456) T ss_pred HHH-HHHCCC--CHHHHHHHHHC-----CCCCCHHHHHHHHHHCCCCHHHHHHH-HHCCCHHCC-------CCHHHHHHH T ss_conf 999-980897--79999999865-----67666899999998179998999999-829934003-------129999864 Q ss_pred H Q ss_conf 9 Q gi|254780370|r 458 Q 458 (473) Q Consensus 458 ~ 458 (473) T Consensus 455 v 455 (456) T PRK09285 455 I 455 (456) T ss_pred C T ss_conf 4 |
|
>KOG2700 consensus | Back alignment and domain information |
---|
Probab=100.00 E-value=5.6e-44 Score=308.82 Aligned_cols=408 Identities=20% Similarity=0.157 Sum_probs=320.9 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCC----CC-CHHHHHHHHHHHHHHH Q ss_conf 507899999999999999999999879999899999999999999666459800156----64-6379999999973111 Q gi|254780370|r 32 SIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSR----DL-EDIHMNIEARLTSLIG 106 (473) Q Consensus 32 s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~----~~-edvh~~iE~~l~~~~G 106 (473) T Consensus 25 s~~~~~~twr~-lw~~lA~ae~~lgL~~itk~ai~e~~s~~-----~~e~~d~~~l~~ee~r~~hdV-mahvh~~~~~cp 97 (481) T KOG2700 25 SDRNKFSTWRR-LWLWLAEAEKELGLTTITKEAIEEMKSSR-----DIENIDFTALSPEEGRYRHDV-MAHVHSFGELCP 97 (481) T ss_pred HHHHHHHHHHH-HHHHHHHHHHCCCCCCCHHHHHHHHHHHC-----CCCCCCHHHCCHHHHHHCCCH-HHHHHHHHHHCC T ss_conf 66654312667-78866202313785213499999988521-----552542333384541304438-999999976363 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 02342014410112378879999999999998677889999974477301452001665301133444567888888786 Q gi|254780370|r 107 SIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFG 186 (473) Q Consensus 107 ~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~ 186 (473) T Consensus 98 ~aagiihlgatsc~vtdnadli~~rd~~k~i~~~l~~vIdrls~~~~~~k~~~~~g~Th~q~A~l~tfgkr~~~~~qel~ 177 (481) T KOG2700 98 IAAGIIHLGATSCFVTDNADLIELRDASKLILPYLAGVIDRLSQFADKYKEKPTLGRTHLQPAQLTTFGKRMCLWIQELL 177 (481) T ss_pred HHCCEEEEEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHH T ss_conf 01054774202366157842013041799999999999999999998711340014136754015579999999899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCC--CCC----CC-H------HHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHH Q ss_conf 20698999874542335653203356--667----89-9------89631038764347856730278864246777688 Q gi|254780370|r 187 RDISRFFDSIERLDECPLGAAALAGT--SFP----ID-R------HFTAKELGFREPTRNSIDSVSDRDFILECLSHSAI 253 (473) Q Consensus 187 rd~~rL~~~~~~~~~~pLG~~A~~GT--~~~----id-r------~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~l~~ 253 (473) T Consensus 178 ~~l~~f~~~~~~~~~~~~kga~--gtqasf~~l~~~~~~kv~~ld~Lv~k~~gf~~~~~~T-GQt~sr~~~~~~~~~la~ 254 (481) T KOG2700 178 RDLERFHRARTDVRFRGLKGAT--GTQASFLSLFLGDMDKVEKLDSLVTKELGFVPMYIVT-GQTYSRKTDAEEVAPLAS 254 (481) T ss_pred HHHHHHHHHHHHHHCCCCCCCH--HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCHHHHHHHHHHHH T ss_conf 9999999863120015665213--0188888863351888998999999981888655445-886783157899999998 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCEECC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHH Q ss_conf 76648999999999841245615404-55456530044433601389987668999752335876740484000010010 Q gi|254780370|r 254 CAMHMSRLAEEIILWSTPQFNFVRLS-DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQE 332 (473) Q Consensus 254 ~~~~l~rla~Dl~~~ss~e~~~i~l~-~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~ 332 (473) T Consensus 255 lgat~~k~~Tdirll~~--~~ev~epFea~q~gsSaMp~krNpm~~E~itslar~l~~~v~~al~~--~~~qw~Ertl~d 330 (481) T KOG2700 255 LGATAHKYATDIRLLAK--FAEVEEPFEAHQIGSSAMPYKRNPMRCERITSLARHLRPYVTQALNT--ASVQWHERTLDD 330 (481) T ss_pred HHHHHHHHHHHHHHHHH--HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHCCCCC T ss_conf 88999999999999999--98752550015555556887778712678758999987777777666--777776503453 Q ss_pred H---HHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCC--CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-- Q ss_conf 0---5579889999998656765230586665210121123--78443999999999853999799999999999999-- Q gi|254780370|r 333 D---KEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT--KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLA-- 405 (473) Q Consensus 333 ~---~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~--~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A-- 405 (473) T Consensus 331 Sa~~rivlP~~Fl~ad~~L~~~~ni~~gl~v~p~~i~r~i~~e~~~~~~eni~mAL~-~~g~srq~ahe~I~~L~~~a~~ 409 (481) T KOG2700 331 SANRRIVLPDAFLTADGNLGTLLNILEGLVVYPKVIERNIRDELPFMVLENIIMALV-KAGLSRQEAHEGIRKLSHQAAQ 409 (481) T ss_pred CCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHH T ss_conf 336533465888877889998898984100152788888876311899999999988-7001299999999999998888 Q ss_pred --HHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHH Q ss_conf --98298968989999994001132689996599999962148999998999999999 Q gi|254780370|r 406 --EKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTY 461 (473) Q Consensus 406 --~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGtap~~V~~~i~~ 461 (473) T Consensus 410 ~v~~e~g~~~~ie~~k~~~~~~~v~ee~~~ll~p~~f~-------gra~dQie~~v~~ 460 (481) T KOG2700 410 VVKQEGGDNDLIERAKEDPTFKPVKEELDSLLDPLNFT-------GRAVDQIEKFVPK 460 (481) T ss_pred HHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHCCCHHCC-------CCCHHHHHHHHHH T ss_conf 99986488178998302423462489998641602045-------2108999987311 |
|
>PRK06389 argininosuccinate lyase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=917.69 Aligned_cols=414 Identities=22% Similarity=0.300 Sum_probs=383.6 Q ss_pred HHCCCCCCCCHHHHH--HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCC Q ss_conf 320332384346999--984255078999999999999999999998799998999999999999996664598001566 Q gi|254780370|r 12 QMWGGRFSSSPSWIM--EKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRD 89 (473) Q Consensus 12 ~lW~grf~~~~~~~~--~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~ 89 (473) T Consensus 2 KlWgGrf~~~~~~~~~~~~~~~si~~D~~L~~~DI~gS~AHa~mL~~~giit~~e~~~I~~~L~~i~~----~~~~~~~~ 77 (434) T PRK06389 2 KIWSGGAGEELENDFYDNIVKDDIDADKNLIKYEIINLLAYHVALAQRRLITEKAPKCVINALIDIYK----NGIEIDLD 77 (434) T ss_pred CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC----CCCCCCCC T ss_conf 98689999876305999885698788999999999876999999998799899999999999999990----99857998 Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH Q ss_conf 46379999999973111023420144101123788799999999999986778899999744773014520016653011 Q gi|254780370|r 90 LEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTA 169 (473) Q Consensus 90 ~edvh~~iE~~l~~~~G~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A 169 (473) T Consensus 78 ~EDiH~~iE~~L~e~iGd~g~klHTgRSRNDQVatd~RL~lr~~~~~l~~~l~~l~~~l~~---~~~~~~mPGYTHlQ~A 154 (434) T PRK06389 78 LEDVHTAIENFVIRRCGDMFKNFRLFLSRNEQVHADLNLFIIDKIIEIEKILYEIIKVIPG---FNLKGRLPGYTHFRQA 154 (434) T ss_pred CCCHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCCCCC T ss_conf 6555799999999997065431120356889999999999999999999999999999997---5416636774222324 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCC-HHHH Q ss_conf 334445678888887862069899987454233565320335666789989631038764347856730278864-2467 Q gi|254780370|r 170 QPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFI-LECL 248 (473) Q Consensus 170 ~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~~~a~~LGf~~~~~ns~dav~sRd~~-~e~~ 248 (473) T Consensus 155 QP~t~~h~l~a~~e~l~rD~~rL~~~~~r~n~~PLGsgA~aGt~~piDR~~~a~~LGF~~~~~Nsl~a~s~r~~~~~~~~ 234 (434) T PRK06389 155 MPMTVNTYINYIKSILYHHINNLDSFLMDLREMPYGYGSGYGSPSSVKFNQMSELLGMEKNIKNPVYSSSLYIKTIENIS 234 (434) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 01217899999999999999999999986144875300025888876889999982999765551888860089999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCC Q ss_conf 77688766489999999998412456154045545653004443360138998766899975233587674048400001 Q gi|254780370|r 249 SHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSK 328 (473) Q Consensus 249 ~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~r 328 (473) T Consensus 235 ~~~s~~~~~LSRlaeDlilwss~--gfv~l~d~~~tGSSIMPQKkNPD~lELiRgk~g~v~G~l~~ll~~~kgLP~~Ynr 312 (434) T PRK06389 235 YLISSLAVDLSRICQDIIIYYEN--GIITIPDEFTTGSSLMPNKRNPDYLELFQGIAAESISVLSFIAQSELNKTTGYHR 312 (434) T ss_pred HHHHHHHHHHHHHHHHHHHHHCC--CCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH T ss_conf 99999999999999999998168--8487576443355668777798499999888877877999999998068651114 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC Q ss_conf 00100557988999999865676523058666521012112378443999999999853999799999999999999982 Q gi|254780370|r 329 DMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKN 408 (473) Q Consensus 329 Dlq~~~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~ 408 (473) T Consensus 313 DlQedKe~lfds~d~~~~~L~i~~~~i~~i~~~~~~~~~~~--~~~~ATd~A~~lv-~kGvPFReAh~ivG~~Vr~~e~l 389 (434) T PRK06389 313 DFQIVKDSTISFINNFERILLGLPDLLYNIKFEITNEKNIK--NSVYATYNAWLAF-KNGMDWKSAYAYIGNKIREGEVL 389 (434) T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC--CCCCHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHH T ss_conf 66622088877999999999999999975881889998530--5553159999999-87998799999999999988875 Q ss_pred CCC----HHH-CCHHHHHHHHHCCCHHHHHHCCHHHHH Q ss_conf 989----689-899999940011326899965999999 Q gi|254780370|r 409 QCE----LAK-LPLAMLQQISPVITSAVYDILKVESSI 441 (473) Q Consensus 409 g~~----l~e-l~~~~~~~~~~~~~~di~~~ldp~~~v 441 (473) T Consensus 390 ~~~~~edl~d~l~~~~l~----~i~~~ik~~~~~~~~~ 423 (434) T PRK06389 390 DEYQPEDLTDYIDVNELK----RINHNIKIIIEPREKL 423 (434) T ss_pred CCCCHHHHHHHCCHHHHH----HHHHHHHHHHCHHHHH T ss_conf 304737788650489897----6325578771689999 |
|
>PRK07492 adenylosuccinate lyase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=599.12 Aligned_cols=412 Identities=20% Similarity=0.221 Sum_probs=354.5 Q ss_pred CCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 96422320233320332384346999984255078999999999999999999998799998999999999999996664 Q gi|254780370|r 1 MSKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIV 80 (473) Q Consensus 1 m~~~~~~~~~~~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~ 80 (473) T Consensus 1 mi~RY~~~em~~ifs--------------------~~~~~~~~l~vE~ALa~Aqa~lGiIp~~aa~~I~~~~~~~~~d~~ 60 (433) T PRK07492 1 MIPRYSRPEMVAIWE--------------------PETKFRIWFEIEAHACEAQAELGVIPKEAAETIWEKGKDAEFDVA 60 (433) T ss_pred CCCCCCCHHHHHHHC--------------------HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHH T ss_conf 987648799998809--------------------079999999999999999998699999999999986022578999 Q ss_pred CCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 59800156646379999999973111023420144101123788799999999999986778899999744773014520 Q gi|254780370|r 81 DGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIM 160 (473) Q Consensus 81 ~~~~~~~~~~edvh~~iE~~l~~~~G~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m 160 (473) T Consensus 61 ~i~~~e~~~~hdv-~a~v~~l~~~~g~~a~~vH~GaTSqDi~DTa~~L~lk~a~~~i~~~l~~l~~~L~~lA~~~~~t~m 139 (433) T PRK07492 61 RIDEIEAVTKHDV-IAFLTHLAEFVGPDARFVHQGMTSSDVLDTCLNVQLVRAADLLLADLDRVLAALKKRAFEHKDTPT 139 (433) T ss_pred HHHHHHHHHCCCH-HHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH T ss_conf 9999998849982-999999998647000413435317868864999999999999999999999999999998556756 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---HHHHHHHCCCCCCCCCHHHH Q ss_conf 016653011334445678888887862069899987454233565320335666789---98963103876434785673 Q gi|254780370|r 161 PGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPID---RHFTAKELGFREPTRNSIDS 237 (473) Q Consensus 161 pg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~id---r~~~a~~LGf~~~~~ns~da 237 (473) T Consensus 140 ~GRTh~Q~A~P~TfG~k~a~w~~~l~r~~~RL~~~~~~~~~~~l~GA-v-Gt~a~~~~~v~~~~a~~LGL~~~~~~~--q 215 (433) T PRK07492 140 IGRSHGIHAEPTTFGLKLARFYAEFSRNRERLVAAREEIATCAISGA-V-GTFANIDPRVEEHVAKKLGLKPEPVST--Q 215 (433) T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-C-CCCCCCCHHHHHHHHHHHCCCCCCCCC--C T ss_conf 68865783100179999999999999999999999987510111440-1-366568889999998861888898766--6 Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 027886424677768876648999999999841245615404-5545653004443360138998766899975233587 Q gi|254780370|r 238 VSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLS-DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLL 316 (473) Q Consensus 238 v~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~-~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~ 316 (473) T Consensus 216 ~~~RD~~~e~~~~La~i~~~l~kia~di~~l~~~ei~Ev~E~f~~gq~GSSaMPhKrNPv~~E~i~~lar~v~~~~~--- 292 (433) T PRK07492 216 VIPRDRHAMFFATLGVIASSIERLAIEIRHLQRTEVLEAEEYFSPGQKGSSAMPHKRNPVLTENLTGLARLVRSYVI--- 292 (433) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH--- T ss_conf 56425799999999999987999999999988666778872146899876668856384999999999999987677--- Q ss_pred HHHHCCCCHHCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCC--CCCCCHHHHHHHHHHHHCCCCH Q ss_conf 674048400001001005---57988999999865676523058666521012112--3784439999999998539997 Q gi|254780370|r 317 TIMKGLPLAYSKDMQEDK---EPVFDALETLQIIILAISAMIEDLTVNKDRLQEAA--TKSHSTATDLADWLVSHAGLPF 391 (473) Q Consensus 317 ~~~~~~p~~~~rDlq~~~---~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~--~~~~~~AT~lAd~Lv~~~GipF 391 (473) T Consensus 293 ~~~~~~~~~hERd~~~s~~er~~lpd~~~~~~~~l~~~~~ll~~L~V~~~rM~~Nl~~~~g~i~se~v~~~L~-~~g~gR 371 (433) T PRK07492 293 PAMENVALWHERDISHSSVERMIGPDATITLDFALNRLAGVIEKLVVYPENMLKNLNKLGGLVHSQRVLLALT-QAGVSR 371 (433) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHHCCHHHHHHHHHHHH-HCCCCH T ss_conf 8988627764201535377888877799999999999998664147879999999988068779999999998-869988 Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHH Q ss_conf 99999999999999982989689899999940011326899965999999 Q gi|254780370|r 392 REAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSI 441 (473) Q Consensus 392 ReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v 441 (473) T Consensus 372 ~~Ah~~V~~~a~~a~~~~~~l~e~l~~d~~v~~~l~~~el~~~~dp~~yl 421 (433) T PRK07492 372 EDAYRLVQRNAMKVWEQGGDFLEELKADPEVRAALSEEEIEELFDLGYHT 421 (433) T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHCCHHHHHHHHCHHHHH T ss_conf 99999999999999987979999987196988409999999871979999 |
|
>cd01362 Fumarase_classII Class II fumarases | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=526.67 Aligned_cols=409 Identities=20% Similarity=0.256 Sum_probs=344.9 Q ss_pred HHHCCCCCCCCHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCC Q ss_conf 3320332384346999984255-078999999999999999999998799998999999999999996664598001566 Q gi|254780370|r 11 NQMWGGRFSSSPSWIMEKINVS-IDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRD 89 (473) Q Consensus 11 ~~lW~grf~~~~~~~~~~~~~s-~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~ 89 (473) T Consensus 15 ~~~yG----~qT~Ra~~NF~is~~~~~~~~I~a~~~vK~AaA~aN~~~G~L~~~~~~aI~~A~~ei~~g~~~~~F~vd~~ 90 (455) T cd01362 15 DALWG----AQTQRSLENFPIGGERMPRELIRALGLLKKAAAQANAELGLLDEEKADAIVQAADEVIAGKLDDHFPLVVW 90 (455) T ss_pred CCCHH----HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEE T ss_conf 56326----99999996749889889999999999999999999998599999999999999999984997135145200 Q ss_pred CC----HHHHHHHHHHHHHH----H-CCC--CCCC------CCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH Q ss_conf 46----37999999997311----1-023--4201------441011237887999999999-99986778899999744 Q gi|254780370|r 90 LE----DIHMNIEARLTSLI----G-SIA--GKMH------TARSRNDQVALDLRLWIKEKT-LEITNDLKKLLTILLDK 151 (473) Q Consensus 90 ~e----dvh~~iE~~l~~~~----G-~~~--~~lH------~grSrND~~~t~~rl~lr~~l-~~l~~~l~~l~~~L~~~ 151 (473) T Consensus 91 Q~GaGTstNMN~NEViAn~A~e~~g~~~g~~~~vhPndhVN~~QStND~~PTA~~ia~~~~l~~~L~~~l~~L~~~L~~K 170 (455) T cd01362 91 QTGSGTQTNMNVNEVIANRAIELLGGVLGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAALALQERLLPALKHLIDALDAK 170 (455) T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 06887633240999999999998476678888769300100234667642279999999999999999999999999999 Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH-------HHHHH Q ss_conf 77301452001665301133444567888888786206989998745423356532033566678998-------96310 Q gi|254780370|r 152 AEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRH-------FTAKE 224 (473) Q Consensus 152 A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~-------~~a~~ 224 (473) T Consensus 171 a~e~~~~vk~GRTHLQdA~PiTlGq~f~a~a~~l~r~~~RL~~a~~~l~~~~lGGtAv-GTG~n~~~~f~~~~~~~L~~~ 249 (455) T cd01362 171 ADEFKDIVKIGRTHLQDATPLTLGQEFSGYAAQLEHAIARIEAALPRLYELALGGTAV-GTGLNAHPGFAEKVAAELAEL 249 (455) T ss_pred HHHHCCCEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHHHHHHH T ss_conf 9984477400541363476600899999999989999999999999999860577443-478788812679999999886 Q ss_pred CCCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCEECCCCCCCCCCCCCCCCCCHHHHH Q ss_conf 3876-434785673027886424677768876648999999999841---245615404554565300444336013899 Q gi|254780370|r 225 LGFR-EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLSDAFSTGSSIMPQKRNPDGAEL 300 (473) Q Consensus 225 LGf~-~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss---~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ 300 (473) T Consensus 250 tgl~~~~a~n~~~a~~~~D~~ve~s~~L~~lA~~L~KIanDirll~SGPr~gl~Ei~lP-~~q~GSSIMPgKvNPv~~E~ 328 (455) T cd01362 250 TGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLGSGPRCGLGELSLP-ENEPGSSIMPGKVNPTQCEA 328 (455) T ss_pred HCCCCEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC-CCCCCCCCCCCCCCCHHHHH T ss_conf 29997116878999848709999999999999999999999999827765684355479-99997787899879889999 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCEECCCHHHHCCCCCCCHHHHH Q ss_conf 87668999752335876740484000010010055798899999986567652-30586665210121123784439999 Q gi|254780370|r 301 VRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISA-MIEDLTVNKDRLQEAATKSHSTATDL 379 (473) Q Consensus 301 ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~~~~l~~ai~~~~~~L~l~~~-li~~l~vn~erm~~~~~~~~~~AT~l 379 (473) T Consensus 329 v~~v~~~ViGnd~ti~~a~~~G~~ELNv~~Plia~~ll~si~lL~~~~~~f~~~~i~gi~vn~e~~~~~l~~S~~l~TaL 408 (455) T cd01362 329 LTMVAAQVMGNDAAITIAGSSGNFELNVFKPVIIYNLLQSIRLLADACRSFADKCVAGIEPNRERIAELLERSLMLVTAL 408 (455) T ss_pred HHHHHHHHHCCHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCHHHHHHH T ss_conf 99999999665999998663530566422838999888899999999999999987658888999999998574389883 Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHH Q ss_conf 999998539997999999999999999829896898999999400113268999659999 Q gi|254780370|r 380 ADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVES 439 (473) Q Consensus 380 Ad~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~ 439 (473) T Consensus 409 ~p~i----------GY~~aa~iak~A~~~g~slrev~le~----~~ls~eeld~lldP~~ 454 (455) T cd01362 409 NPHI----------GYDKAAKIAKKAHKEGLTLKEAALEL----GYLTEEEFDRLVDPEK 454 (455) T ss_pred HHHH----------HHHHHHHHHHHHHHHCCCHHHHHHHC----CCCCHHHHHHHCCCCC T ss_conf 2376----------39999999999999399899999885----9999999998659212 |
This group contains proteins similar to Escherichia coli fumarase C and the human mitochondrial fumarase. These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle. |
>cd01357 Aspartatase Aspartase_like | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=520.08 Aligned_cols=407 Identities=23% Similarity=0.287 Sum_probs=355.1 Q ss_pred HHHHCCCCCCCCHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCC Q ss_conf 33320332384346999984255-07899999999999999999999879999899999999999999666459800156 Q gi|254780370|r 10 VNQMWGGRFSSSPSWIMEKINVS-IDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSR 88 (473) Q Consensus 10 ~~~lW~grf~~~~~~~~~~~~~s-~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~ 88 (473) T Consensus 14 ~~~~yG----aqT~Ra~~nF~i~~~~~~~~~i~a~~~vK~aaA~aN~~~g~l~~~~~~aI~~a~~ei~~g~~~d~Fp~~v 89 (450) T cd01357 14 ADAYYG----IQTLRALENFPISGLKIHPELIRALAMVKKAAALANAELGLLDEEKAEAIVKACDEIIAGKLHDQFVVDV 89 (450) T ss_pred CCCCHH----HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC T ss_conf 655303----8899999775988888999999999999999999999809999999999999999998599754688633 Q ss_pred CCC----HHHHHHHHHHHHH----HH-CCCC--CCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 646----3799999999731----11-0234--201------44101123788799999999999986778899999744 Q gi|254780370|r 89 DLE----DIHMNIEARLTSL----IG-SIAG--KMH------TARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDK 151 (473) Q Consensus 89 ~~e----dvh~~iE~~l~~~----~G-~~~~--~lH------~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~ 151 (473) T Consensus 90 ~QtGsGTstNMN~NEVIan~A~~~~g~~~g~~~~vhPnDhVN~~QSsND~~PTA~~ia~~~~~~~L~pal~~l~~~L~~K 169 (450) T cd01357 90 IQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDVYPTALRLALILLLRKLLDALAALQEAFQAK 169 (450) T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 10798653544089999999999957777888876953223565677647878999999999999999999999999999 Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH-------HHHHHH Q ss_conf 7730145200166530113344456788888878620698999874542335653203356667899-------896310 Q gi|254780370|r 152 AEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDR-------HFTAKE 224 (473) Q Consensus 152 A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr-------~~~a~~ 224 (473) T Consensus 170 a~e~~~vik~GRTHLQdA~PiTlGq~f~~~~~~l~r~~~Rl~~~~~rl~~l~lGGtAv-GTG~na~~~~~~~~~~~L~~~ 248 (450) T cd01357 170 AREFADVLKMGRTQLQDAVPMTLGQEFGAYATALKRDRARIYKARERLREVNLGGTAI-GTGINAPPGYIELVVEKLSEI 248 (450) T ss_pred HHHHCCCEEECHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCHHHHHHHHHHHHH T ss_conf 9984246310543346775400799999999999999999999999988735776100-278789931689999999997 Q ss_pred CCCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCEECCCCCCCCCCCCCCCCCCHHHHH Q ss_conf 3876-434785673027886424677768876648999999999841---245615404554565300444336013899 Q gi|254780370|r 225 LGFR-EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLSDAFSTGSSIMPQKRNPDGAEL 300 (473) Q Consensus 225 LGf~-~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss---~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ 300 (473) T Consensus 249 tgl~~~~a~n~~~a~~~~D~~~e~~~~L~~la~~L~KIa~Dirll~SGPr~g~~Ei~lP-~~q~GSSiMPgKvNPv~~E~ 327 (450) T cd01357 249 TGLPLKRAENLIDATQNTDAFVEVSGALKRLAVKLSKIANDLRLLSSGPRAGLGEINLP-AVQPGSSIMPGKVNPVIPEV 327 (450) T ss_pred HCCCCEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC-CCCCCCCCCCCCCCCHHHHH T ss_conf 49997568888999957729999999999999999999999999736865672034569-99997888899879789999 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCEECCCHHHHCCCCCCCHHHHH Q ss_conf 87668999752335876740484000010010055798899999986567652-30586665210121123784439999 Q gi|254780370|r 301 VRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISA-MIEDLTVNKDRLQEAATKSHSTATDL 379 (473) Q Consensus 301 ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~~~~l~~ai~~~~~~L~l~~~-li~~l~vn~erm~~~~~~~~~~AT~l 379 (473) T Consensus 328 v~~v~~qV~Gnd~~v~~a~~~G~leLNv~~P~i~~~ll~Si~lL~~a~~~f~~~cl~Gi~~N~er~~~~l~~s~~L~TaL 407 (450) T cd01357 328 VNQVAFQVIGNDLTITMAAEAGQLELNVFEPVIAYNLLESIDILTNAVRTLRERCIDGITANEERCREYVENSIGIVTAL 407 (450) T ss_pred HHHHHHHHHCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCCHHHHH T ss_conf 99989998561999998741343677601748899999999999999999999987648988999999998390169983 Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCC Q ss_conf 999998539997999999999999999829896898999999400113268999659 Q gi|254780370|r 380 ADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILK 436 (473) Q Consensus 380 Ad~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ld 436 (473) T Consensus 408 ~p~i----------GY~~aa~Iak~A~~~g~tlre~~~e~----~~ls~ee~d~iln 450 (450) T cd01357 408 NPYI----------GYEAAAEIAKEALETGRSVRELVLEE----GLLTEEELDEILS 450 (450) T ss_pred CHHH----------HHHHHHHHHHHHHHHCCCHHHHHHHC----CCCCHHHHHHHHC T ss_conf 2076----------39999999999999399799999884----9999999999849 |
This group contains proteins similar to aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. |
>PRK00485 fumC fumarate hydratase; Reviewed | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=516.90 Aligned_cols=411 Identities=19% Similarity=0.248 Sum_probs=343.8 Q ss_pred HHHCCCCCCCCHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCC Q ss_conf 3320332384346999984255-078999999999999999999998799998999999999999996664598001566 Q gi|254780370|r 11 NQMWGGRFSSSPSWIMEKINVS-IDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRD 89 (473) Q Consensus 11 ~~lW~grf~~~~~~~~~~~~~s-~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~ 89 (473) T Consensus 19 ~a~yG----~qT~Ra~~NF~is~~~~~~~~I~a~~~vK~AaA~aN~~~g~L~~~~a~aI~~A~~ei~~g~~~~~F~vdv~ 94 (462) T PRK00485 19 DALWG----AQTQRSLENFPIGGERMPRELIRALALIKKAAAQVNAELGLLDAEKADAIVAAADEVLAGKHDDHFPLDVW 94 (462) T ss_pred CCCHH----HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEE T ss_conf 56315----98999996729888889999999999999999999998499999999999999999984995014412111 Q ss_pred CC----HHHHHHHHHHHHHH----H-CCCCC--CC------CCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH Q ss_conf 46----37999999997311----1-02342--01------441011237887999999999-99986778899999744 Q gi|254780370|r 90 LE----DIHMNIEARLTSLI----G-SIAGK--MH------TARSRNDQVALDLRLWIKEKT-LEITNDLKKLLTILLDK 151 (473) Q Consensus 90 ~e----dvh~~iE~~l~~~~----G-~~~~~--lH------~grSrND~~~t~~rl~lr~~l-~~l~~~l~~l~~~L~~~ 151 (473) T Consensus 95 Q~GsGTstNMN~NEVIAn~A~e~lg~~~g~~~~vhPnDhVN~~QStND~~PTA~~ia~~~~~~~~L~~al~~L~~~l~~K 174 (462) T PRK00485 95 QTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAALAIVEHLLPALEHLRDTLAAK 174 (462) T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 17887523351999999999998487778888769300100123667653169999999999998999999999999999 Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH-------HHHHH Q ss_conf 77301452001665301133444567888888786206989998745423356532033566678998-------96310 Q gi|254780370|r 152 AEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRH-------FTAKE 224 (473) Q Consensus 152 A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~-------~~a~~ 224 (473) T Consensus 175 a~e~~~~vk~GRTHLQdA~PiTlGq~f~a~a~~l~r~~~Rl~~~~~~l~~l~lGGtAv-GTGlna~~~f~~~v~~~L~~~ 253 (462) T PRK00485 175 AEEFADIVKIGRTHLQDATPLTLGQEFSGYAAQLEHGIERIEAALPHLYELALGGTAV-GTGLNAHPGFAEKVAAELAEL 253 (462) T ss_pred HHHHCCCEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHHHHHHH T ss_conf 9985456200521154375511799999999999999999999999999874377532-378888810589999999998 Q ss_pred CCCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCEECCCCCCCCCCCCCCCCCCHHHHH Q ss_conf 3876-434785673027886424677768876648999999999841---245615404554565300444336013899 Q gi|254780370|r 225 LGFR-EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLSDAFSTGSSIMPQKRNPDGAEL 300 (473) Q Consensus 225 LGf~-~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss---~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ 300 (473) T Consensus 254 tgl~~~~a~n~~~a~~~~D~~~e~~~~L~~lA~~L~KianDlRll~SGPr~glgEi~lP-a~q~GSSIMPgKvNPvi~E~ 332 (462) T PRK00485 254 TGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLASGPRCGLGEISLP-ENEPGSSIMPGKVNPTQCEA 332 (462) T ss_pred HCCCCEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC-CCCCCCCCCCCCCCCHHHHH T ss_conf 59997126878999858829999999999999999999999999726876684145479-99998787899889778999 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCEECCCHHHHCCCCCCCHHHHH Q ss_conf 87668999752335876740484000010010055798899999986567652-30586665210121123784439999 Q gi|254780370|r 301 VRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISA-MIEDLTVNKDRLQEAATKSHSTATDL 379 (473) Q Consensus 301 ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~~~~l~~ai~~~~~~L~l~~~-li~~l~vn~erm~~~~~~~~~~AT~l 379 (473) T Consensus 333 v~~v~~qV~Gnd~tv~~A~~~G~lELNv~~Pli~~~ll~si~lL~~a~~~f~~~cI~Gi~vn~e~~~~~l~~S~~l~TaL 412 (462) T PRK00485 333 LTMVCAQVMGNDAAVTFAGSQGNFELNVFKPVIAYNFLQSIRLLADAMRSFADHCVVGIEPNEERIKELLERSLMLVTAL 412 (462) T ss_pred HHHHHHHHCCCHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCHHHHHHC T ss_conf 99845764075799999875133776134628886157699999999999999987638878999999997574479870 Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHH Q ss_conf 99999853999799999999999999982989689899999940011326899965999999 Q gi|254780370|r 380 ADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSI 441 (473) Q Consensus 380 Ad~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v 441 (473) T Consensus 413 ~p~i----------GY~~aa~iak~A~~~g~~lrev~le----~~~ls~eeld~lldP~~mt 460 (462) T PRK00485 413 NPHI----------GYDKAAKIAKKAHKEGLTLKEAALE----LGYLSEEEFDRWVDPEKMT 460 (462) T ss_pred CCHH----------HHHHHHHHHHHHHHHCCCHHHHHHH----CCCCCHHHHHHHCCHHHCC T ss_conf 4276----------4999999999999959989999988----5999999999866998618 |
|
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase_2: Adenylsuccinate lyase (ASL)_subgroup 2 | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=508.93 Aligned_cols=410 Identities=17% Similarity=0.145 Sum_probs=328.8 Q ss_pred CCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHH Q ss_conf 96422320233320332384346999984255078999999999999999999998799-99899999999999999666 Q gi|254780370|r 1 MSKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGI-ISSEEAQKIIEGLKVIRAEI 79 (473) Q Consensus 1 m~~~~~~~~~~~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gi-i~~~~~~~i~~al~~i~~~~ 79 (473) T Consensus 1 mi~RY~~~em~~ifS--------------------~e~~~~~~l~vE~ala~aqaelGi~i~~~a~~~i~a~~~~~d~~~ 60 (436) T cd03302 1 LASRYASKEMVYIFS--------------------PRKKFSTWRKLWLWLAEAEKELGLDISDEQIEEMKANVENIDFEI 60 (436) T ss_pred CCCCCCCHHHHHHHC--------------------HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHH T ss_conf 986638699998819--------------------469999999999999999998299999999999997054489999 Q ss_pred HCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 45980015664637999999997311102342014410112378879999999999998677889999974477301452 Q gi|254780370|r 80 VDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTI 159 (473) Q Consensus 80 ~~~~~~~~~~~edvh~~iE~~l~~~~G~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~ 159 (473) T Consensus 61 i~-~~-e~~t~Hdv-~a~v~~l~~~~~~~~~~vH~G~TSqDI~DTa~~L~lk~al~~i~~~l~~l~~~L~~lA~~~~~t~ 137 (436) T cd03302 61 AA-AE-EKKLRHDV-MAHVHAFGLLCPAAAGIIHLGATSCFVTDNTDLIQIRDALDLILPKLAAVIDRLAEFALEYKDLP 137 (436) T ss_pred HH-HH-HHHHCCCC-HHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 99-99-97719894-89999999857614471663754024577999999999999999999999999999999966873 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC----CCC-------HHHHHHHCCCC Q ss_conf 0016653011334445678888887862069899987454233565320335666----789-------98963103876 Q gi|254780370|r 160 MPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSF----PID-------RHFTAKELGFR 228 (473) Q Consensus 160 mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~----~id-------r~~~a~~LGf~ 228 (473) T Consensus 138 m~gRTHgQ~A~PtTfG~k~a~w~~el~r~~~rL~~~~~~~~~~~~~GAvGt~a~~~~~~~~~~~~~~~l~~~~a~~lgl~ 217 (436) T cd03302 138 TLGFTHYQPAQLTTVGKRACLWIQDLLMDLRNLERLRDDLRFRGVKGTTGTQASFLDLFEGDHDKVEALDELVTKKAGFK 217 (436) T ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCC T ss_conf 22200677440028999999999999999999999996122213678733012045424674688999999999734887 Q ss_pred CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 4347856730278864246777688766489999999998412456154-045545653004443360138998766899 Q gi|254780370|r 229 EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVR-LSDAFSTGSSIMPQKRNPDGAELVRAKTGR 307 (473) Q Consensus 229 ~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~-l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~ 307 (473) T Consensus 218 ~~~~-~~~q~~~Rd~~ae~~~~La~ia~~l~kia~di~~l~~--~~Ev~E~f~~gq~GSStMPHKrNPi~~E~i~~lar~ 294 (436) T cd03302 218 KVYP-VTGQTYSRKVDIDVLNALSSLGATAHKIATDIRLLAN--LKEVEEPFEKGQIGSSAMPYKRNPMRSERCCSLARH 294 (436) T ss_pred CCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH T ss_conf 6788-8567687378999999999999999988999998815--981753048999875877745175989999999999 Q ss_pred HHHHHHHHHHHHHCCCCHHCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCC--CCCCCHHHHHHHH Q ss_conf 97523358767404840000100100---557988999999865676523058666521012112--3784439999999 Q gi|254780370|r 308 INGALLSLLTIMKGLPLAYSKDMQED---KEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAA--TKSHSTATDLADW 382 (473) Q Consensus 308 ~~g~~~~~~~~~~~~p~~~~rDlq~~---~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~--~~~~~~AT~lAd~ 382 (473) T Consensus 295 ~~~~~~~~~~~~--~~~whERd~~~s~~er~~lpe~~~l~~~~l~~~~~~l~~L~V~~~~M~~Nl~~~~gli~se~vm~~ 372 (436) T cd03302 295 LMNLASNAAQTA--STQWFERTLDDSANRRIAIPEAFLAADAILITLQNISEGLVVYPKVIERHIRQELPFMATENIIMA 372 (436) T ss_pred HHHHHHHHHHHH--HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCCHHHHHHHHHH T ss_conf 998568999875--554334678620899889889999999999999999807989899999999760688999999999 Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHCCCC------HHHCCHHHHHHHHHCCCHHHHHHCCHHHHH Q ss_conf 99853999799999999999999982989------689899999940011326899965999999 Q gi|254780370|r 383 LVSHAGLPFREAHYITGCTVSLAEKNQCE------LAKLPLAMLQQISPVITSAVYDILKVESSI 441 (473) Q Consensus 383 Lv~~~GipFReAH~iVg~lV~~A~~~g~~------l~el~~~~~~~~~~~~~~di~~~ldp~~~v 441 (473) T Consensus 373 L~-~~g~gR~~Ah~~V~~~a~~a~~~~~~~~~~~~l~e~~~~d-~~~-~l~~~el~~lldP~~yl 434 (436) T cd03302 373 AV-KAGGDRQDAHERIRVLSHQAAAVVKQEGGDNDLIERIKND-AYF-KPIWDELDALLDPKTFI 434 (436) T ss_pred HH-HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC-CCC-CCCHHHHHHHHCHHHCC T ss_conf 98-7699999999999999999999988546761299997549-877-99999999864988436 |
This subgroup contains mainly eukaryotic proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). ASL deficiency has been linked to several pathologies including psychomotor retardation with autistic features, epilepsy and muscle wasting. |
>PRK13353 aspartate ammonia-lyase; Provisional | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=492.33 Aligned_cols=412 Identities=21% Similarity=0.257 Sum_probs=346.5 Q ss_pred HHHHCCCCCCCCHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCC Q ss_conf 33320332384346999984255-07899999999999999999999879999899999999999999666459800156 Q gi|254780370|r 10 VNQMWGGRFSSSPSWIMEKINVS-IDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSR 88 (473) Q Consensus 10 ~~~lW~grf~~~~~~~~~~~~~s-~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~ 88 (473) T Consensus 19 ~~~~yG----~qT~Ra~~nF~i~~~~~~~~~I~a~~~iK~aaA~~N~~~g~l~~~~~~aI~~A~~ei~~g~~~~~Fpvdv 94 (473) T PRK13353 19 ADAYYG----IQTLRAVENFPITGYKIHEELIRAFAIVKKAAALANMDLGRLERNKAGAIVEAADEILDGKLHDQFIVDP 94 (473) T ss_pred CCCCHH----HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC T ss_conf 756314----9899999774988888999999999999999999999828999999999999999998599712588754 Q ss_pred CCC----HHHHHHHHHHH----HHHH-CCCC--CCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 646----37999999997----3111-0234--201------44101123788799999999999986778899999744 Q gi|254780370|r 89 DLE----DIHMNIEARLT----SLIG-SIAG--KMH------TARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDK 151 (473) Q Consensus 89 ~~e----dvh~~iE~~l~----~~~G-~~~~--~lH------~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~ 151 (473) T Consensus 95 ~Q~GsGTstNMN~NEVian~a~e~lg~~~g~~~~vhPnDhVN~~QStND~~PTA~~ia~~~~~~~L~~~l~~L~~~L~~K 174 (473) T PRK13353 95 IQGGAGTSMNMNANEVIANRALELLGGEKGDYHYVSPNDHVNMAQSTNDVFPTAIRIATLNLLEGLLQAMGALHDVFELK 174 (473) T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 11798653534099999999999947877888874976433343457636767999999999999999999999999999 Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH-------HHHHH Q ss_conf 77301452001665301133444567888888786206989998745423356532033566678998-------96310 Q gi|254780370|r 152 AEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRH-------FTAKE 224 (473) Q Consensus 152 A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~-------~~a~~ 224 (473) T Consensus 175 A~e~~~ivkiGRTHlQdAvPiTlGqef~~~a~~l~r~~~Rl~~~~~~l~~l~lGGTAV-GTG~n~~~~~~~~v~~~L~~~ 253 (473) T PRK13353 175 AEEFDHVIKMGRTHLQDAVPIRLGQEFKAYSRVLERDMKRIQQSREHLYEVNLGATAV-GTGLNADPEYIEAVVKHLAAI 253 (473) T ss_pred HHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCHHHHHHHHHHHHH T ss_conf 9987411212522364553412799999999999999999999999988744787012-679999826999999989987 Q ss_pred CCCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCEECCCCCCCCCCCCCCCCCCHHHHH Q ss_conf 3876-434785673027886424677768876648999999999841---245615404554565300444336013899 Q gi|254780370|r 225 LGFR-EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLSDAFSTGSSIMPQKRNPDGAEL 300 (473) Q Consensus 225 LGf~-~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss---~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ 300 (473) T Consensus 254 tgl~~~~a~n~~~a~~~~D~~ve~s~~L~~lA~~L~KIanDiRlL~SGPr~GlgEi~lP-a~Q~GSSIMPgKvNPv~~E~ 332 (473) T PRK13353 254 TGLPLVGAEDLVDATQNTDAYVEVSAALKVCAMNLSKIANDLRLLASGPRTGLGEINLP-AVQPGSSIMPGKVNPVMPEV 332 (473) T ss_pred HCCCCEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC-CCCCCCCCCCCCCCCHHHHH T ss_conf 19996247888999967589999999999999999999999999757865560134569-99895888898869779999 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCEECCCHHHHCCCCCCCHHHHH Q ss_conf 87668999752335876740484000010010055798899999986567652-30586665210121123784439999 Q gi|254780370|r 301 VRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISA-MIEDLTVNKDRLQEAATKSHSTATDL 379 (473) Q Consensus 301 ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~~~~l~~ai~~~~~~L~l~~~-li~~l~vn~erm~~~~~~~~~~AT~l 379 (473) T Consensus 333 v~~va~qV~Gnd~ti~~a~~~G~leLNv~~Pvi~~~ll~si~lL~~a~~~f~~~ci~Gi~~n~e~~~~~l~~S~~LvTaL 412 (473) T PRK13353 333 INQIAFQVIGNDHTICLAAEAGQLELNVMEPVIAFNLLQSISILTNGFRAFTDNCVKGIEANEERCKEYVEKSVGIITAL 412 (473) T ss_pred HHHHHHHHHCCHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCCHHHHC T ss_conf 99999999651867665242554565235407899999999999999999999988458888999999998480517660 Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHH Q ss_conf 99999853999799999999999999982989689899999940011326899965999999 Q gi|254780370|r 380 ADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSI 441 (473) Q Consensus 380 Ad~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v 441 (473) T Consensus 413 ~p~i----------GY~~aa~iak~A~~~g~slre~~le~----~~lseeeld~lldP~~m~ 460 (473) T PRK13353 413 NPHI----------GYEAAARVAKEAIATGQSVRELCLEN----GVLTEEELDLILDPFEMT 460 (473) T ss_pred CCHH----------HHHHHHHHHHHHHHHCCCHHHHHHHC----CCCCHHHHHHHCCHHHHC T ss_conf 5266----------39999999999999499899999884----999999999867999847 |
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>cd01596 Aspartatase_like Aspartase_like | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=477.59 Aligned_cols=406 Identities=22% Similarity=0.262 Sum_probs=329.1 Q ss_pred HHHCCCCCCCCHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCC Q ss_conf 3320332384346999984255-078999999999999999999998799998999999999999996664598001566 Q gi|254780370|r 11 NQMWGGRFSSSPSWIMEKINVS-IDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRD 89 (473) Q Consensus 11 ~~lW~grf~~~~~~~~~~~~~s-~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~ 89 (473) T Consensus 15 ~~~yG----~qT~Ra~~NF~is~~~~~~~~I~a~~~vK~AaA~aN~~~g~L~~~~~~aI~~Ac~ei~~g~~~~~F~vdv~ 90 (450) T cd01596 15 DAYYG----AQTQRALENFPISGERMPPELIRALALVKKAAALANAELGLLDEEKADAIVQACDEVIAGKLDDQFPLDVW 90 (450) T ss_pred CCCHH----HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCEEHHH T ss_conf 56315----98999996759889889999999999999999999998099999999999999999984996430411032 Q ss_pred CC----HHHHHHHHHHHH----HHH-CCCCC-CC------CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 46----379999999973----111-02342-01------441-011237887999999999999867788999997447 Q gi|254780370|r 90 LE----DIHMNIEARLTS----LIG-SIAGK-MH------TAR-SRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKA 152 (473) Q Consensus 90 ~e----dvh~~iE~~l~~----~~G-~~~~~-lH------~gr-SrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A 152 (473) T Consensus 91 Q~GsGTstNMN~NEVIAn~A~e~lg~~~g~~~~~~~d~~~~~qsSnd~~~~a~~~~a~~~~~~~L~~al~~L~~~l~~Ka 170 (450) T cd01596 91 QTGSGTSTNMNVNEVIANRALELLGGKKGKYPVHPNDDVNNSQSSNDDFPPAAHIAAALALLERLLPALEQLQDALDAKA 170 (450) T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 07897645441899999999998388778777889832356678888299999999999999999999999999999999 Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH-------HHHHHC Q ss_conf 7301452001665301133444567888888786206989998745423356532033566678998-------963103 Q gi|254780370|r 153 EEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRH-------FTAKEL 225 (473) Q Consensus 153 ~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~-------~~a~~L 225 (473) T Consensus 171 ~e~~~iik~GRTHLQdA~PiTlGqef~~~a~~l~r~~~RL~~~~~~l~~l~lGGtAv-GTG~na~~~~~~~v~~~L~~~t 249 (450) T cd01596 171 EEFADIVKIGRTHLQDAVPLTLGQEFSGYAAQLARDIARIEAALERLRELNLGGTAV-GTGLNAPPGYAEKVAAELAELT 249 (450) T ss_pred HHHCCCEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE-ECCCCCCHHHHHHHHHHHHHHH T ss_conf 974697643544464163352899999999999999999999999998753887621-0788898127899999999985 Q ss_pred CCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCEECCCCCCCCCCCCCCCCCCHHHHHH Q ss_conf 876-434785673027886424677768876648999999999841---2456154045545653004443360138998 Q gi|254780370|r 226 GFR-EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLSDAFSTGSSIMPQKRNPDGAELV 301 (473) Q Consensus 226 Gf~-~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss---~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~i 301 (473) T Consensus 250 gl~~~~a~n~~~a~~~rD~~ve~s~~L~~lA~~L~KIanDirll~SGPr~gl~Ei~lP-~~q~GSSiMPgKvNPv~~E~v 328 (450) T cd01596 250 GLPFVTAPNLFEATAAHDALVEVSGALKTLAVSLSKIANDLRLLSSGPRAGLGEINLP-ANQPGSSIMPGKVNPVIPEAV 328 (450) T ss_pred CCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECC-CCCCCCCCCCCCCCCHHHHHH T ss_conf 9997137879999818839999999999999999999999999716876786123469-999988888999897799999 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCEECCCHHHHCCCCCCCHHHHHH Q ss_conf 7668999752335876740484000010010055798899999986567652-305866652101211237844399999 Q gi|254780370|r 302 RAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISA-MIEDLTVNKDRLQEAATKSHSTATDLA 380 (473) Q Consensus 302 r~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~~~~l~~ai~~~~~~L~l~~~-li~~l~vn~erm~~~~~~~~~~AT~lA 380 (473) T Consensus 329 ~~v~~qViGnd~ti~~A~~~G~lELNv~~Plia~~ll~si~lL~~a~~~f~~~ci~Gi~vn~e~~~~~l~~S~~LvTaL~ 408 (450) T cd01596 329 NMVAAQVIGNDTAITMAGSAGQLELNVFKPVIAYNLLQSIRLLANACRSFRDKCVEGIEANEERCKEYVENSLMLVTALN 408 (450) T ss_pred HHHHHHHHCCHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCCHHHHHC T ss_conf 99899996351787787630236762034389999999999999999999999876589989999999984830898833 Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCC Q ss_conf 99998539997999999999999999829896898999999400113268999659 Q gi|254780370|r 381 DWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILK 436 (473) Q Consensus 381 d~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ld 436 (473) T Consensus 409 p~i----G------Y~~aa~Iak~A~~~g~sl~e~~le~----~~ls~ee~d~lld 450 (450) T cd01596 409 PHI----G------YEKAAEIAKEALKEGRTLREAALEL----GLLTEEELDEILD 450 (450) T ss_pred CHH----H------HHHHHHHHHHHHHHCCCHHHHHHHC----CCCCHHHHHHHHC T ss_conf 186----3------9999999999999399899999885----9999999999749 |
This group contains proteins similar to aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle. |
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism] | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=391.30 Aligned_cols=405 Identities=22% Similarity=0.270 Sum_probs=340.3 Q ss_pred CHHHHHHHHCCC-HHHH--HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCC----HH Q ss_conf 346999984255-0789--9999999999999999999879999899999999999999666459800156646----37 Q gi|254780370|r 21 SPSWIMEKINVS-IDFD--KKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLE----DI 93 (473) Q Consensus 21 ~~~~~~~~~~~s-~~~D--~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~~e----dv 93 (473) T Consensus 25 ~TlRA~eNF~Is~~~~~~~p~~i~a~~~VKKAaAlaN~elg~l~~~~~~aIv~ACDeil~Gk~~dqFvvD~~QGGAGTS~ 104 (471) T COG1027 25 HTLRAVENFPISGLKISDVPEFIRAMAMVKKAAALANKELGALPKEIADAIVKACDEILDGKCHDQFVVDVYQGGAGTST 104 (471) T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCC T ss_conf 78778863777688666448999999999999998655517787789999999999997585511043001116877552 Q ss_pred HHH----HHHHHHHHHH-CCCCC--CC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 999----9999973111-02342--01------44101123788799999999999986778899999744773014520 Q gi|254780370|r 94 HMN----IEARLTSLIG-SIAGK--MH------TARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIM 160 (473) Q Consensus 94 h~~----iE~~l~~~~G-~~~~~--lH------~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m 160 (473) T Consensus 105 NMN~NEVIAN~AlE~lG~~KGeY~~~hPndhVNmsQSTND~yPTa~ria~~~~l~~L~~al~~L~~af~~Ka~EF~~ilK 184 (471) T COG1027 105 NMNANEVIANRALELLGHEKGEYQYLHPNDHVNMSQSTNDAYPTAFRIAVYKSLRKLIDALEDLIEAFERKAKEFADILK 184 (471) T ss_pred CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 56389999999999856777750356875534300035643305899999999999999999999999999999865552 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH-------HHHHHCCCC-CCCC Q ss_conf 01665301133444567888888786206989998745423356532033566678998-------963103876-4347 Q gi|254780370|r 161 PGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRH-------FTAKELGFR-EPTR 232 (473) Q Consensus 161 pg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~-------~~a~~LGf~-~~~~ 232 (473) T Consensus 185 mGRTqLQDAvPmtlGqEF~Afa~~l~ed~~ri~~~~~~l~evNlGgTAi-GTGiNa~~~Y~~~vv~~l~evtg~~~~~A~ 263 (471) T COG1027 185 MGRTQLQDAVPMTLGQEFGAFAVALKEDIKRIYRAAELLLEVNLGGTAI-GTGINAPKGYIELVVKKLAEVTGLPLVPAE 263 (471) T ss_pred CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE-CCCCCCCHHHHHHHHHHHHHHHCCCCCCCH T ss_conf 2745413446601314679999999999999999998888505785011-467689843799999999997588875512 Q ss_pred CHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH Q ss_conf 85673027886424677768876648999999999841---245615404554565300444336013899876689997 Q gi|254780370|r 233 NSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRIN 309 (473) Q Consensus 233 ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss---~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~ 309 (473) T Consensus 264 ~Lieatq~~~afv~vsg~lk~~Av~LsKI~NDlRLLsSGPr~Gl~EI~LP-~~Q~GSSIMPgKVNPVipEvvnQvcf~Vi 342 (471) T COG1027 264 NLIEATQDTGAFVMVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLP-AVQAGSSIMPGKVNPVIPEVVNQVCFKVI 342 (471) T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHH T ss_conf 58988706537999999999999999998625655326975675632477-77899877888768415999999999996 Q ss_pred HHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCEECCCHHHHCCCCCCCHHHHHHHHHHHHCC Q ss_conf 52335876740484000010010055798899999986567652-30586665210121123784439999999998539 Q gi|254780370|r 310 GALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISA-MIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAG 388 (473) Q Consensus 310 g~~~~~~~~~~~~p~~~~rDlq~~~~~l~~ai~~~~~~L~l~~~-li~~l~vn~erm~~~~~~~~~~AT~lAd~Lv~~~G 388 (473) T Consensus 343 GnD~tit~AaeaGQLqLNvmePvI~~~l~~Si~iL~na~~~l~ekcI~gItaN~e~C~~~v~nSigivTaLnp~i----- 417 (471) T COG1027 343 GNDTTITMAAEAGQLQLNVMEPVIAYALFESISILTNACRNLREKCIDGITANEERCEEYVENSIGIVTALNPYI----- 417 (471) T ss_pred CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC----- T ss_conf 514788998871434465010899999999999999999999999864130379999999984467887613101----- Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHH Q ss_conf 99799999999999999982989689899999940011326899965999999 Q gi|254780370|r 389 LPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSI 441 (473) Q Consensus 389 ipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v 441 (473) T Consensus 418 -----Gy~~~~~iaK~a~~tgksv~evvLe~----g~Lteeel~~Il~~~~m~ 461 (471) T COG1027 418 -----GYENAAIIAKEALETGKSVREVVLER----GLLTEEELDDILSPENMT 461 (471) T ss_pred -----CCHHHHHHHHHHHHCCCCHHHHHHHH----CCCCHHHHHHHHCHHHCC T ss_conf -----51178899999997488599999872----798899999870956317 |
|
>cd01598 PurB PurB: PurB_like adenylosuccinases (adenylsuccinate lyase, ASL) | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=401.19 Aligned_cols=384 Identities=20% Similarity=0.198 Sum_probs=272.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHH--HHHHHHHHHHHHHHHHCCCEE-----CCCCCCHHHHHHHHHHHHHHH-- Q ss_conf 99999999999999999999879999899--999999999999666459800-----156646379999999973111-- Q gi|254780370|r 36 DKKLFEQDILGSKVHTTMLAKQGIISSEE--AQKIIEGLKVIRAEIVDGSFV-----FSRDLEDIHMNIEARLTSLIG-- 106 (473) Q Consensus 36 D~~l~~~di~~~~Ah~~~l~~~gii~~~~--~~~i~~al~~i~~~~~~~~~~-----~~~~~edvh~~iE~~l~~~~G-- 106 (473) T Consensus 7 E~alik~rv~VEi~~l~~L~~~~~i~~~~~~~~~~~~~l~~i~~~f~~~d~~~Ik~iE~~tnHDV-kAvey~i~e~~~~~ 85 (425) T cd01598 7 EYALIKYRVQVEVEWLIALSNLEEIPEVPPLTKEELKFLRAIIENFSEEDALRIKEIEATTNHDV-KAVEYFLKEKFETL 85 (425) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCE-EEHHHHHHHHHHHC T ss_conf 68999999999999999996579876788789999999999997389989999999972518996-45199999998754 Q ss_pred ----CCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf ----02342014410112378879999999999-9986778899999744773014520016653011334445678888 Q gi|254780370|r 107 ----SIAGKMHTARSRNDQVALDLRLWIKEKTL-EITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAY 181 (473) Q Consensus 107 ----~~~~~lH~grSrND~~~t~~rl~lr~~l~-~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~ 181 (473) T Consensus 86 ~~l~~~~e~IHfG~TSqDI~dta~~L~lk~a~~~vi~~~l~~l~~~L~~lA~~~~~tpmlgRTHGQ~A~PtTfGke~a~~ 165 (425) T cd01598 86 GLLKKIKEFIHFACTSEDINNLAYALMIKEARNEVILPLLKEIIDSLKKLAKEYADVPMLSRTHGQPATPTTLGKELAVF 165 (425) T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHH T ss_conf 12134433356466488898799999999999999988899999999999998545631104217766340199999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC------CCC-CC----HHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHH Q ss_conf 8878620698999874542335653203356------667-89----989631038764347856730278864246777 Q gi|254780370|r 182 VEMFGRDISRFFDSIERLDECPLGAAALAGT------SFP-ID----RHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 (473) Q Consensus 182 ~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT------~~~-id----r~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~ 250 (473) T Consensus 166 ~~rl~r~~~rL~~~~---~~gk~~G-Av-Gt~~Ah~~a~p~~dw~~~~~~f~~~LGL~~~~~tT--QI~~rD~~ae~~~~ 238 (425) T cd01598 166 VYRLERQYKQLKQIE---ILGKFNG-AV-GNFNAHLVAYPDVDWRKFSEFFVTSLGLTWNPYTT--QIEPHDYIAELFDA 238 (425) T ss_pred HHHHHHHHHHHHHHH---HHHHCCC-CC-CCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC--CCCCCHHHHHHHHH T ss_conf 999999999999743---0231057-66-63266676346764999999999972888898878--85661399999889 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCE-ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHCC Q ss_conf 68876648999999999841245615-404554565300444336013899876689997523358767404840-0001 Q gi|254780370|r 251 SAICAMHMSRLAEEIILWSTPQFNFV-RLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPL-AYSK 328 (473) Q Consensus 251 l~~~~~~l~rla~Dl~~~ss~e~~~i-~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~-~~~r 328 (473) T Consensus 239 l~~i~~~l~~la~Di~~~~s~--~~~~e~~~~gqvGSStMPHK~NPI~~En~egnl~la~~l~~~~~~---~l~~sr~qR 313 (425) T cd01598 239 LARINTILIDLCRDIWGYISL--GYFKQKVKKGEVGSSTMPHKVNPIDFENAEGNLGLSNALLNHLSA---KLPISRLQR 313 (425) T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHH---HCCHHHHHH T ss_conf 999999999999999999850--052126789898048888552850156650568889999999887---333188772 Q ss_pred CHHHHHHH--HHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCCC-CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH Q ss_conf 00100557--988999999865676523058666521012112378-443999999999853999799999999999999 Q gi|254780370|r 329 DMQEDKEP--VFDALETLQIIILAISAMIEDLTVNKDRLQEAATKS-HSTATDLADWLVSHAGLPFREAHYITGCTVSLA 405 (473) Q Consensus 329 Dlq~~~~~--l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~~~-~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A 405 (473) T Consensus 314 DLsdStv~Rnig~~~~~~~ia~~~~~~gL~~l~vn~~~m~~nL~~~~~vlaEai~~~l-r~~G~~--~aye~vk~ltrg~ 390 (425) T cd01598 314 DLTDSTVLRNIGVAFGHSLIAYKSLLRGLDKLELNEARLLEDLDANWEVLAEPIQTVM-RRYGIP--NPYEKLKDLTRGK 390 (425) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCHHHHHHHHHH-HHHCCC--CHHHHHHHHHCCC T ss_conf 2424677777765377899999999977628557899999998718255999999999-984897--8899999985789 Q ss_pred HHCCCCHHHCCHHHHHHHHHCCC---HHHHHHCCHHHHH Q ss_conf 98298968989999994001132---6899965999999 Q gi|254780370|r 406 EKNQCELAKLPLAMLQQISPVIT---SAVYDILKVESSI 441 (473) Q Consensus 406 ~~~g~~l~el~~~~~~~~~~~~~---~di~~~ldp~~~v 441 (473) T Consensus 391 ~~~~~~l-----~~~i~~l~~~~~~k~~l~-~ltP~~Y~ 423 (425) T cd01598 391 RIDKETL-----KEFIDSLDIPEEAKAELL-ALTPANYI 423 (425) T ss_pred CCCHHHH-----HHHHHHCCCCHHHHHHHH-CCCCCCCC T ss_conf 8888999-----999983899999999998-08984667 |
This group contains proteins similar to EcASL, the product of the gene purB in Escherichia coli. ASL is a member of the Lyase class I family of the Lyase_I superfamily. Members of the Lyase class I family function as homotetramers to catalyze similar beta-elimination reactions in which a Calpha-N or Calpha-O bond is cleaved with the subsequent release of fumarate as one of the products. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two non-sequential steps in the de novo purine biosynthesis pathway: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). |
>COG0114 FumC Fumarase [Energy production and conversion] | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=379.01 Aligned_cols=408 Identities=20% Similarity=0.284 Sum_probs=335.5 Q ss_pred HHHHCCCCCCCCHHHHHHHHCCCHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCC Q ss_conf 3332033238434699998425507-899999999999999999999879999899999999999999666459800156 Q gi|254780370|r 10 VNQMWGGRFSSSPSWIMEKINVSID-FDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSR 88 (473) Q Consensus 10 ~~~lW~grf~~~~~~~~~~~~~s~~-~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~ 88 (473) T Consensus 17 ad~~wg----AQTqRs~~nF~ig~~~mp~~~I~Al~~lKkaaA~~N~~LG~L~~~~a~aI~~Aadev~~Gk~d~~FPl~V 92 (462) T COG0114 17 ADALWG----AQTQRSLENFPIGGEKMPREIIRALGLLKKAAAQVNADLGLLDPEKADAIIAAADEVLAGKHDDHFPLDV 92 (462) T ss_pred HHHHHH----HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE T ss_conf 788899----9999998637865332849999999999999999889827999899999999999997586667787688 Q ss_pred CC---C-----HHHHHHHHHHHHHHH-CCCC--CCC------CCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH Q ss_conf 64---6-----379999999973111-0234--201------44101123788799999999-99998677889999974 Q gi|254780370|r 89 DL---E-----DIHMNIEARLTSLIG-SIAG--KMH------TARSRNDQVALDLRLWIKEK-TLEITNDLKKLLTILLD 150 (473) Q Consensus 89 ~~---e-----dvh~~iE~~l~~~~G-~~~~--~lH------~grSrND~~~t~~rl~lr~~-l~~l~~~l~~l~~~L~~ 150 (473) T Consensus 93 wQTGSGTqsNMN~NEVIAnrA~e~~gg~~g~~~~VHPNDhVN~sQSSNDtfPTAmhIAa~~~v~~~LiPaL~~L~~~L~~ 172 (462) T COG0114 93 WQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAVVNRLIPALKHLIKTLAA 172 (462) T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 75599863446289999999999837545778887998667765656762036999999999998757999999999999 Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH-------HHHH Q ss_conf 477301452001665301133444567888888786206989998745423356532033566678998-------9631 Q gi|254780370|r 151 KAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRH-------FTAK 223 (473) Q Consensus 151 ~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~-------~~a~ 223 (473) T Consensus 173 Ka~~~~~iVKiGRTHLqDAtPlTlGQE~sGy~~ql~~~~~~i~~~l~~l~eLAiGGTAV-GTGlNa~p~f~ekva~~i~~ 251 (462) T COG0114 173 KAEEFADVVKIGRTHLQDATPLTLGQEFSGYAAQLEHALERIEASLPHLYELAIGGTAV-GTGLNAHPEFGEKVAEELAE 251 (462) T ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCHHHHHHHHHHH T ss_conf 99998645532731034457632443567899999999999999989999870577230-46768993478999999999 Q ss_pred HCCCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCEECCCCCCCCCCCCCCCCCCHHHH Q ss_conf 03876-434785673027886424677768876648999999999841---24561540455456530044433601389 Q gi|254780370|r 224 ELGFR-EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLSDAFSTGSSIMPQKRNPDGAE 299 (473) Q Consensus 224 ~LGf~-~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss---~e~~~i~l~~~~~~GSSiMPqKrNP~~~E 299 (473) T Consensus 252 ~TG~~F~~a~NkF~al~~hd~lv~~~Gal~~lA~~L~KIAnDiR~l~SGPr~GLgEi~lP-enePGSSIMPGKVNPtq~E 330 (462) T COG0114 252 LTGLPFVTAPNKFEALAAHDALVEASGALRTLAVSLMKIANDIRWLGSGPRCGLGEIELP-ENEPGSSIMPGKVNPTQCE 330 (462) T ss_pred HHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHH T ss_conf 758975048847887650068999867899999999999888878706887775421057-7899766789998942799 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHH----HHHHHHHHHHHHHHHHHH-HHCCCEECCCHHHHCCCCCCC Q ss_conf 987668999752335876740484000010010055----798899999986567652-305866652101211237844 Q gi|254780370|r 300 LVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKE----PVFDALETLQIIILAISA-MIEDLTVNKDRLQEAATKSHS 374 (473) Q Consensus 300 ~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~~~----~l~~ai~~~~~~L~l~~~-li~~l~vn~erm~~~~~~~~~ 374 (473) T Consensus 331 A~tmv~~QV~Gnd~ai~~ags~---G-nFELNv~~Pvi~~N~LqS~~LLada~~~f~~~ci~gie~n~~~i~~~l~~Slm 406 (462) T COG0114 331 ALTMVAAQVIGNDAAIAFAGSQ---G-NFELNVFKPVIAYNFLQSVRLLADAMRSFADHCIVGIEPNEERIKELLERSLM 406 (462) T ss_pred HHHHHHHHHHCCHHHHHHHHCC---C-CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHH T ss_conf 9999999997555888875405---7-42200102899999999999999999999987661351388999999861705 Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHH Q ss_conf 3999999999853999799999999999999982989689899999940011326899965999999 Q gi|254780370|r 375 TATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSI 441 (473) Q Consensus 375 ~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v 441 (473) T Consensus 407 LVTaLnp----~I------GYdkAa~IAK~A~keg~tlreaa~----~~G~lte~efd~~v~Pe~mv 459 (462) T COG0114 407 LVTALNP----HI------GYDKAAKIAKKAHKEGTTLREAAL----ELGLLSEEEFDKLVDPEKMV 459 (462) T ss_pred HHHHCCC----CC------CHHHHHHHHHHHHHCCCCHHHHHH----HCCCCCHHHHHHHCCHHHHC T ss_conf 7886054----00------438999999999877982999998----83888999999863998826 |
|
>TIGR00839 aspA aspartate ammonia-lyase; InterPro: IPR004708 A number of enzymes, belonging to the lyase class, for which fumarate is a substrate have been shown , to share a short conserved sequence around a methionine which is probably involved in the catalytic activity of this type of enzymes | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=390.74 Aligned_cols=404 Identities=22% Similarity=0.246 Sum_probs=337.2 Q ss_pred HHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH-HHHCCCEECCCCCCHHH--- Q ss_conf 46999984255---078999999999999999999998799998999999999999996-66459800156646379--- Q gi|254780370|r 22 PSWIMEKINVS---IDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRA-EIVDGSFVFSRDLEDIH--- 94 (473) Q Consensus 22 ~~~~~~~~~~s---~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~-~~~~~~~~~~~~~edvh--- 94 (473) T Consensus 22 TLRA~ENF~Itn~ki~~~pefi~~~~~VKKAaaLAN~~l~~i~~~~~~AIv~AcDe~l~~GK~~DQFivD~~QGGAGTS~ 101 (469) T TIGR00839 22 TLRASENFFITNDKISDVPEFIRGLAMVKKAAALANVELGLIPEKIAQAIVAACDEILETGKCHDQFIVDVIQGGAGTSV 101 (469) T ss_pred HHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC T ss_conf 43332030336861136078999999999999875588743088999999999999985687100222443338876542 Q ss_pred -HHH----HHHHHHHHH-CCCCCCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf -999----999973111-0234201--------44101123788799999999999986778899999744773014520 Q gi|254780370|r 95 -MNI----EARLTSLIG-SIAGKMH--------TARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIM 160 (473) Q Consensus 95 -~~i----E~~l~~~~G-~~~~~lH--------~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m 160 (473) T Consensus 102 NMN~NEViaN~ALE~mGH~KGeY~~~~PndHVN~sQStNDayPta~~Ia~y~~L~kL~~~~~~l~~~F~~KA~EF~~viK 181 (469) T TIGR00839 102 NMNTNEVIANLALEIMGHKKGEYQFLNPNDHVNRSQSTNDAYPTALRIAVYKSLEKLVDTMEDLRDAFKQKAKEFASVIK 181 (469) T ss_pred CCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 23067899998887625514662120886510224666664401789999999999999999999999888899888862 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-------HHHHCCCCC-CCC Q ss_conf 016653011334445678888887862069899987454233565320335666789989-------631038764-347 Q gi|254780370|r 161 PGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHF-------TAKELGFRE-PTR 232 (473) Q Consensus 161 pg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~~-------~a~~LGf~~-~~~ 232 (473) T Consensus 182 MGRTqLQDAVPmtlGQEF~ay~~~l~~di~~~~~~~~~l~EvNlGaTAi-GTGlN~~~~Y~~lvvK~laevtG~p~V~A~ 260 (469) T TIGR00839 182 MGRTQLQDAVPMTLGQEFEAYALLLERDIKNIKRTRQLLLEVNLGATAI-GTGLNTPPEYIKLVVKKLAEVTGLPLVPAE 260 (469) T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE-CCCCCCCHHHHHHHHHHHHHCCCCCCCCHH T ss_conf 1675454532355560489999999999999999987787763475102-157787711389998876411688642523 Q ss_pred CHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH Q ss_conf 85673027886424677768876648999999999841---245615404554565300444336013899876689997 Q gi|254780370|r 233 NSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRIN 309 (473) Q Consensus 233 ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss---~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~ 309 (473) T Consensus 261 ~LieAT~~tgAYv~V~g~LKr~avklSKvcNDLRLlsSGPRAGL~EInLP-~~QpGSSIMPgKVNPV~pEvvNQvcF~VI 339 (469) T TIGR00839 261 NLIEATQDTGAYVEVSGALKRIAVKLSKVCNDLRLLSSGPRAGLNEINLP-ELQPGSSIMPGKVNPVVPEVVNQVCFKVI 339 (469) T ss_pred HHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHCEEE T ss_conf 57775338996266418899999986457656776405775440005764-44778843787778721432520420100 Q ss_pred HHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCEECCCHHHHCCCCCCCHHHHHHHHHHHHCC Q ss_conf 5233587674048400001001005579889999998656765-230586665210121123784439999999998539 Q gi|254780370|r 310 GALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAIS-AMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAG 388 (473) Q Consensus 310 g~~~~~~~~~~~~p~~~~rDlq~~~~~l~~ai~~~~~~L~l~~-~li~~l~vn~erm~~~~~~~~~~AT~lAd~Lv~~~G 388 (473) T Consensus 340 GND~tv~lA~EaGQLqLNVmEPVi~~~lf~S~~Il~na~~~l~~kC~~GItaN~~~c~~YV~nSiGivT~lNPhi----G 415 (469) T TIGR00839 340 GNDTTVTLAAEAGQLQLNVMEPVIGQALFESISILTNAIENLTDKCVEGITANEKICEDYVFNSIGIVTALNPHI----G 415 (469) T ss_pred CCCHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCCCEECCCCCC----C T ss_conf 562588886113510120000689999999999998999988864203106768987401001110201014201----4 Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHH Q ss_conf 99799999999999999982989689899999940011326899965999999 Q gi|254780370|r 389 LPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSI 441 (473) Q Consensus 389 ipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v 441 (473) T Consensus 416 ------y~~~~~iak~a~~tg~svrd~~Le~----~~LTee~LDdIl~~~nl~ 458 (469) T TIGR00839 416 ------YENGALIAKEAAKTGKSVRDVVLEK----GLLTEEELDDILSPENLL 458 (469) T ss_pred ------CCHHHHHHHHHHHCCCCHHHHHHCC----CCCCHHHHHCCCCHHHHC T ss_conf ------2237799999974388330232224----556755410103826512 |
Aspartate ammonia-lyase catalyses the conversion of aspartate to fumarate.; GO: 0008797 aspartate ammonia-lyase activity, 0006531 aspartate metabolic process. |
>TIGR00979 fumC_II fumarate hydratase, class II; InterPro: IPR005677 Fumarase C catalyzes the stereospecific interconversion of fumarate to L-malate as part of the metabolic citric acid or Kreb's cycle | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=385.74 Aligned_cols=409 Identities=21% Similarity=0.277 Sum_probs=339.0 Q ss_pred HHHHHCCCCCCCCHHHHHHHHCCC-HH-HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEC Q ss_conf 233320332384346999984255-07-8999999999999999999998799998999999999999996664598001 Q gi|254780370|r 9 EVNQMWGGRFSSSPSWIMEKINVS-ID-FDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVF 86 (473) Q Consensus 9 ~~~~lW~grf~~~~~~~~~~~~~s-~~-~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~ 86 (473) T Consensus 14 ~adkyWG----AQT~RS~~nF~iG~~e~MP~~lI~Afa~lKk~aA~~N~~LG~L~~~k~~~I~~A~DeiL~G~~~d~FPL 89 (459) T TIGR00979 14 PADKYWG----AQTQRSLENFKIGGKEKMPKELIRAFAILKKAAAIVNEDLGKLDAEKADAIAAAADEILAGKFDDHFPL 89 (459) T ss_pred CHHHHHH----HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC T ss_conf 2112323----666898872566888778788999999999999999686279988899999998769873874477985 Q ss_pred CCCC---C-----HHHHHHHHHHHHHHH-CCCCC--CC------CCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH Q ss_conf 5664---6-----379999999973111-02342--01------441011237887999999999-99986778899999 Q gi|254780370|r 87 SRDL---E-----DIHMNIEARLTSLIG-SIAGK--MH------TARSRNDQVALDLRLWIKEKT-LEITNDLKKLLTIL 148 (473) Q Consensus 87 ~~~~---e-----dvh~~iE~~l~~~~G-~~~~~--lH------~grSrND~~~t~~rl~lr~~l-~~l~~~l~~l~~~L 148 (473) T Consensus 90 ~vWQTGSGTQsNMN~NEViANrA~~~~gG~~G~k~~iHPNDhVNkSQSSNDtFPTAMHIAAv~~~~~~LIP~L~~L~~~l 169 (459) T TIGR00979 90 VVWQTGSGTQSNMNVNEVIANRAIELLGGKLGSKKPIHPNDHVNKSQSSNDTFPTAMHIAAVLAIKEQLIPALENLKKTL 169 (459) T ss_pred EEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 37867877410022589999999998477667888789876568887788876678999999999875316799999999 Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-------H Q ss_conf 744773014520016653011334445678888887862069899987454233565320335666789989-------6 Q gi|254780370|r 149 LDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHF-------T 221 (473) Q Consensus 149 ~~~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~~-------~ 221 (473) T Consensus 170 ~~Ks~~F~~ivKIGRTHLqDAtPLTLGQEfSGY~~qL~~~l~~i~~sL~~l~~LA~GGTAV-GTGLN~~~~f~~Kv~~~~ 248 (459) T TIGR00979 170 DEKSKEFADIVKIGRTHLQDATPLTLGQEFSGYVAQLEHGLERIEESLPHLYELALGGTAV-GTGLNTHPGFDEKVAEEI 248 (459) T ss_pred HHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE-ECCCCCCHHHHHHHHHHH T ss_conf 9999986087200564413244540024589999999999999999999999973577323-156688666788999999 Q ss_pred HHHCCCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCEECCCCCCCCCCCCCCCCCCHH Q ss_conf 3103876-434785673027886424677768876648999999999841---245615404554565300444336013 Q gi|254780370|r 222 AKELGFR-EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLSDAFSTGSSIMPQKRNPDG 297 (473) Q Consensus 222 a~~LGf~-~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss---~e~~~i~l~~~~~~GSSiMPqKrNP~~ 297 (473) T Consensus 249 ~~~T~~~F~~ApNKF~ALa~HDAiv~ahGaL~~LA~sL~KIAnD~R~LgSGPRCGlGEl~~PENE-PGSSIMPGKVNPTQ 327 (459) T TIGR00979 249 AKFTGLPFVTAPNKFEALAAHDAIVEAHGALKTLAASLMKIANDIRWLGSGPRCGLGELFLPENE-PGSSIMPGKVNPTQ 327 (459) T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCH T ss_conf 99737899899616778644589998647899999988779877878507886420025677787-57876978987104 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHH----HHHHHHHHHHHHHHHH-HHCCCEECCCHHHHCCCCC Q ss_conf 8998766899975233587674048400001001005579----8899999986567652-3058666521012112378 Q gi|254780370|r 298 AELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPV----FDALETLQIIILAISA-MIEDLTVNKDRLQEAATKS 372 (473) Q Consensus 298 ~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~~~~l----~~ai~~~~~~L~l~~~-li~~l~vn~erm~~~~~~~ 372 (473) T Consensus 328 ~EalTMVC~QVmGNd~tI~~agS~---G-nFELNVFkPViIyNfLqS~~LLsDa~~SF~~hcv~Gi~pN~~ri~~~l~~S 403 (459) T TIGR00979 328 CEALTMVCVQVMGNDATIGFAGSQ---G-NFELNVFKPVIIYNFLQSVRLLSDAMESFREHCVVGIEPNKERIQQLLENS 403 (459) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC---C-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH T ss_conf 358899888773002454533204---6-531234525899879989999998999888640124502458999997521 Q ss_pred CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHH Q ss_conf 443999999999853999799999999999999982989689899999940011326899965999999 Q gi|254780370|r 373 HSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSI 441 (473) Q Consensus 373 ~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v 441 (473) T Consensus 404 LMLVTALN----PhiG------Yd~AakiAK~Ahk~GitLKeaAl~----Lg~Lse~eFD~~V~PE~Mv 458 (459) T TIGR00979 404 LMLVTALN----PHIG------YDNAAKIAKKAHKEGITLKEAALE----LGLLSEEEFDKWVVPEKMV 458 (459) T ss_pred HHHHHHHC----CCCC------HHHHHHHHHHHHHCCCCHHHHHHH----CCCCCHHHCCCCCCCCCCC T ss_conf 13345423----5457------478999999997439777899974----4897868827827986267 |
The recent three-dimensional structure of fumarase C from Escherichia coli has identified a binding site for anions which is generated by side chains from three of the four subunits within the tetramer. These same side chains are found in the three most highly conserved regions within the class II fumarate hydratase family. Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences.; GO: 0004333 fumarate hydratase activity, 0006106 fumarate metabolic process, 0045239 tricarboxylic acid cycle enzyme complex. |
>KOG1317 consensus | Back alignment and domain information |
---|
Probab=100.00 E-value=3.8e-40 Score=283.63 Aligned_cols=407 Identities=18% Similarity=0.265 Sum_probs=309.7 Q ss_pred HHHHCCCCCCCCHHHHHHHHCCCHHHH---HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEC Q ss_conf 333203323843469999842550789---99999999999999999998799998999999999999996664598001 Q gi|254780370|r 10 VNQMWGGRFSSSPSWIMEKINVSIDFD---KKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVF 86 (473) Q Consensus 10 ~~~lW~grf~~~~~~~~~~~~~s~~~D---~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~ 86 (473) T Consensus 42 ~DkyyGA----QT~Rs~~NF~IGg~~ERMP~pii~AfGiLKkaaA~vN~~~G-LDpkis~Ai~~AadeV~~GKL~dhFPL 116 (487) T KOG1317 42 ADKYYGA----QTQRSLQNFKIGGERERMPEPIIQAFGILKKAAAEVNQEYG-LDPKISKAISQAADEVASGKLNDHFPL 116 (487) T ss_pred CHHHHHH----HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHCCCCCCCCCE T ss_conf 0433307----88877635645880102766899998899999998757618-885889999998888854763356754 Q ss_pred CC---CCC-----HHHHHHHHHHHHHHH-CCCC-CCC------CCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH Q ss_conf 56---646-----379999999973111-0234-201------44101123788799999999-9999867788999997 Q gi|254780370|r 87 SR---DLE-----DIHMNIEARLTSLIG-SIAG-KMH------TARSRNDQVALDLRLWIKEK-TLEITNDLKKLLTILL 149 (473) Q Consensus 87 ~~---~~e-----dvh~~iE~~l~~~~G-~~~~-~lH------~grSrND~~~t~~rl~lr~~-l~~l~~~l~~l~~~L~ 149 (473) T Consensus 117 vvwQTGSGTQsNMN~NEVIsNrAieilGg~~GsK~VHPNdHvN~SQSSNDTFPtamHIa~~~ei~~~L~P~l~~L~~aL~ 196 (487) T KOG1317 117 VVWQTGSGTQSNMNANEVISNRAIEILGGKLGSKKVHPNDHVNKSQSSNDTFPTAMHIAAATEINSRLIPALTNLRDALE 196 (487) T ss_pred EEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 68863787424672777776778998645446663587542341114677640478999999888777588898999988 Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH-------HHHH Q ss_conf 447730145200166530113344456788888878620698999874542335653203356667899-------8963 Q gi|254780370|r 150 DKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDR-------HFTA 222 (473) Q Consensus 150 ~~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr-------~~~a 222 (473) T Consensus 197 aKs~EfkdIiKIGRTHtqDAvPLTLGQEFsgY~qQ~~ngl~Rv~~~lpr~y~LA~GGTAV-GTGLNTr~GFaeKia~~va 275 (487) T KOG1317 197 AKSKEFKDIIKIGRTHTQDAVPLTLGQEFSGYVQQVTNGLQRVAATLPRLYQLAQGGTAV-GTGLNTRKGFAEKIAARVA 275 (487) T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCHHHHHHHHHH T ss_conf 536888999985221245555540100224699999989999986415899996378510-2565566457899999999 Q ss_pred HHCCCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCCEECCCCCCCCCCCCCCCCCCHHH Q ss_conf 103876-4347856730278864246777688766489999999998412---456154045545653004443360138 Q gi|254780370|r 223 KELGFR-EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTP---QFNFVRLSDAFSTGSSIMPQKRNPDGA 298 (473) Q Consensus 223 ~~LGf~-~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~---e~~~i~l~~~~~~GSSiMPqKrNP~~~ 298 (473) T Consensus 276 ~ltgLpFvtApNkFEALAahDA~VE~~GalNt~A~SlmKianDIRfLGSGPRcGlgEL~LPEN-EPGSSIMPGKVNPTQc 354 (487) T KOG1317 276 ELTGLPFVTAPNKFEALAAHDAMVEVSGALNTIAVSLMKIANDIRFLGSGPRCGLGELMLPEN-EPGSSIMPGKVNPTQC 354 (487) T ss_pred HHHCCCCEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHH T ss_conf 873897410661888776545678741307789999999852112105788777653136789-9986668888791788 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHH----HHHHHHHHHHHHHHHHH-HHHCCCEECCCHHHHCCCCCC Q ss_conf 9987668999752335876740484000010010055----79889999998656765-230586665210121123784 Q gi|254780370|r 299 ELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKE----PVFDALETLQIIILAIS-AMIEDLTVNKDRLQEAATKSH 373 (473) Q Consensus 299 E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~~~----~l~~ai~~~~~~L~l~~-~li~~l~vn~erm~~~~~~~~ 373 (473) T Consensus 355 EamTmvcaQVMGN~vAvtvgGsnGhF----ELNVFKP~i~~nvL~SirLl~D~~~sF~~nCV~Gi~aN~eri~kl~~eSL 430 (487) T KOG1317 355 EAMTMVCAQVMGNHVAVTVGGSNGHF----ELNVFKPLIASNVLHSIRLLADASVSFTKNCVVGIEANKERIAKLLNESL 430 (487) T ss_pred HHHHHHHHHHHCCCEEEEECCCCCEE----EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH T ss_conf 99999999984573589963667626----77330489999999888876401312214245223278788999987767 Q ss_pred CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHH Q ss_conf 43999999999853999799999999999999982989689899999940011326899965999999 Q gi|254780370|r 374 STATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSI 441 (473) Q Consensus 374 ~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v 441 (473) T Consensus 431 MLVTaLN----PhIG------YD~aa~iAK~AHKng~TLk~~Al----~lGvltee~F~ewV~Pe~Ml 484 (487) T KOG1317 431 MLVTALN----PHIG------YDNAAKIAKTAHKNGTTLKEEAL----KLGVLTEEQFDEWVVPEKML 484 (487) T ss_pred HHHHCCC----CCCC------CCHHHHHHHHHHHCCCCHHHHHH----HHCCCCHHHHHHHHCHHHCC T ss_conf 6543048----6547------40688999976526876899898----85547599887650877404 |
|
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase_1: Adenylsuccinate lyase (ASL)_subgroup 1 | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=619.63 Aligned_cols=370 Identities=24% Similarity=0.289 Sum_probs=323.2 Q ss_pred CCCCCHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 22320233320332384346999984255078999999999999999999998799998999999999999996664598 Q gi|254780370|r 4 KIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGS 83 (473) Q Consensus 4 ~~~~~~~~~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~ 83 (473) T Consensus 1 Ry~~~em~~ifs--------------------d~~~~~~~l~vE~AlA~aqa~~G~Ip~~aa~~I~~~~~~d~~~i~~~e 60 (387) T cd01360 1 RYGRPEMKKIWS--------------------EENKFRKWLEVEAAVCEAWAKLGVIPAEAAEEIRKKAKFDVERVKEIE 60 (387) T ss_pred CCCCHHHHHHCC--------------------HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH T ss_conf 999689998809--------------------699999999999999999987799999999999986658999999999 Q ss_pred EECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH Q ss_conf 00156646379999999973111023420144101123788799999999999986778899999744773014520016 Q gi|254780370|r 84 FVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGF 163 (473) Q Consensus 84 ~~~~~~~edvh~~iE~~l~~~~G~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~ 163 (473) T Consensus 61 ---~~~~hdv-~a~v~~l~e~~g~~~~~iH~G~TsqDivdTa~~L~lk~a~~~i~~~l~~l~~~L~~lA~~~~~t~m~gr 136 (387) T cd01360 61 ---AETKHDV-IAFVTAIAEYCGEAGRYIHFGLTSSDVVDTALALQLREALDIILKDLKELLEVLKKKALEHKDTVMVGR 136 (387) T ss_pred ---HHHCCCH-HHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH T ss_conf ---8849983-999999998664010612317757419989999999976999999999999999999998127740125 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-HHHHHHHCCCCCCCCCHHHHCCCCC Q ss_conf 653011334445678888887862069899987454233565320335666789-9896310387643478567302788 Q gi|254780370|r 164 THLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPID-RHFTAKELGFREPTRNSIDSVSDRD 242 (473) Q Consensus 164 TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~id-r~~~a~~LGf~~~~~ns~dav~sRd 242 (473) T Consensus 137 TH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lgGAvGt~a~~~~~~~~~~a~~LGl~~~~~~~--~~~~Rd 214 (387) T cd01360 137 THGIHAEPTTFGLKFALWYAEFKRHLERLKEARERILVGKISGAVGTYANLGPEVEERVAEKLGLKPEPIST--QVIQRD 214 (387) T ss_pred HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC--CCCCCH T ss_conf 325644235399999999999999999999999988420446421035669979999999980999776542--221538 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 6424677768876648999999999841245615404-554565300444336013899876689997523358767404 Q gi|254780370|r 243 FILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLS-DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKG 321 (473) Q Consensus 243 ~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~-~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~ 321 (473) T Consensus 215 ~~~e~~~~l~~i~~~l~kia~Di~~l~~~e~~el~e~f~~~~~GSS~MPhK~NP~~~E~i~~lar~~~~~~---~~~~~~ 291 (387) T cd01360 215 RHAEYLSTLALIASTLEKIATEIRHLQRTEVLEVEEPFSKGQKGSSAMPHKRNPILSENICGLARVIRSNV---IPALEN 291 (387) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH---HHHHHC T ss_conf 99999999999998999999999998742101622246899970487776617588899999999999999---999704 Q ss_pred CCCHHCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCC--CCCCHHHHHHHHHHHHCCCCHHHHHH Q ss_conf 840000100100---5579889999998656765230586665210121123--78443999999999853999799999 Q gi|254780370|r 322 LPLAYSKDMQED---KEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT--KSHSTATDLADWLVSHAGLPFREAHY 396 (473) Q Consensus 322 ~p~~~~rDlq~~---~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~--~~~~~AT~lAd~Lv~~~GipFReAH~ 396 (473) T Consensus 292 ~~~~~eRDl~~~~~e~~~lp~~~~~~~~~L~~~~~ll~~L~v~~~~M~~nl~~~~g~~~ae~~~~~Lv~-~G~~r~~Ah~ 370 (387) T cd01360 292 VALWHERDISHSSVERVILPDATILLDYILRRMTRVLENLVVYPENMRRNLNLTKGLIFSQRVLLALVE-KGMSREEAYE 370 (387) T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCHHHHHHHHHHHHH-CCCCHHHHHH T ss_conf 655343554124777754788999999999999999854889899999998604786799999999987-7998899999 Q ss_pred HHHHHHH Q ss_conf 9999999 Q gi|254780370|r 397 ITGCTVS 403 (473) Q Consensus 397 iVg~lV~ 403 (473) T Consensus 371 ~V~r~~~ 377 (387) T cd01360 371 IVQREYY 377 (387) T ss_pred HHHHHHH T ss_conf 9999978 |
This subgroup contains bacterial and archeal proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). |
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase_like (ASL_like): This subgroup contains proteins similar to ASL and prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE) | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=603.38 Aligned_cols=358 Identities=23% Similarity=0.243 Sum_probs=316.8 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHC-CCCCCCC Q ss_conf 999999999999999999998799998999999999999996664598001566463799999999731110-2342014 Q gi|254780370|r 36 DKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGS-IAGKMHT 114 (473) Q Consensus 36 D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~~edvh~~iE~~l~~~~G~-~~~~lH~ 114 (473) T Consensus 7 d~~~i~~~l~ve~A~a~a~~~~G~ip~~~a~~I~~~~~~~~~d~~~~~~~~~~~~h~v-~a~~~~l~~~~~~~~~~~vH~ 85 (381) T cd01595 7 EENKLRTWLDVEAALAEAQAELGLIPKEAAEEIRAAADVFEIDAERIAEIEKETGHDV-IAFVYALAEKCGEDAGEYVHF 85 (381) T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCH-HHHHHHHHHHCCHHCCCCCCC T ss_conf 0899999999999999999877999999999999987405478999999987628808-999999998677021475568 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 41011237887999999999999867788999997447730145200166530113344456788888878620698999 Q gi|254780370|r 115 ARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFD 194 (473) Q Consensus 115 grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~ 194 (473) T Consensus 86 G~TsnDi~~Ta~~L~lr~~~~~l~~~l~~l~~~l~~~a~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rl~~ 165 (381) T cd01595 86 GATSQDINDTALALQLRDALDIILPDLDALIDALAKLALEHKDTPMLGRTHGQHALPTTFGKKFAVWAAELLRHLERLEE 165 (381) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 97588888799999999999999999999999999999981487110311367176664999999999999999999999 Q ss_pred HHHHHHHHHHHHHCCCC----CCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 87454233565320335----66678998963103876434785673027886424677768876648999999999841 Q gi|254780370|r 195 SIERLDECPLGAAALAG----TSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST 270 (473) Q Consensus 195 ~~~~~~~~pLG~~A~~G----T~~~idr~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss 270 (473) T Consensus 166 ~~~~~~~~~lgGavGt~~~~~~~~~~~~~~~a~~LGl~~~~~~--~~~~~rd~~~e~~~~l~~~~~~l~kia~Dl~~~~~ 243 (381) T cd01595 166 ARERVLVGGISGAVGTHASLGPKGPEVEERVAEKLGLKVPPIT--TQIEPRDRIAELLSALALIAGTLEKIATDIRLLQR 243 (381) T ss_pred HHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCH--HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9998987257863201102499669999999998489987303--20113379999999999999999999999999863 Q ss_pred CCCCCEECC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHH---HHHHHHHHHHHHH Q ss_conf 245615404-554565300444336013899876689997523358767404840000100100---5579889999998 Q gi|254780370|r 271 PQFNFVRLS-DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQED---KEPVFDALETLQI 346 (473) Q Consensus 271 ~e~~~i~l~-~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~---~~~l~~ai~~~~~ 346 (473) T Consensus 244 ~e~gev~~~~~~~~~GSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~---~~l~~~~eRD~~~~~~~~~~l~~~~~~~~~ 320 (381) T cd01595 244 TEIGEVEEPFEKGQVGSSTMPHKRNPIDSENIEGLARLVRALAAPAL---ENLVQWHERDLSDSSVERNILPDAFLLLDA 320 (381) T ss_pred HCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCCCHHHHHHHHHHHHHHHHHH T ss_conf 10450313678999887888887686889999999999999999999---854200148874028999899999999999 Q ss_pred HHHHHHHHHCCCEECCCHHHHCCC--CCCCHHHHHHHHHHHHCCCCHHHHHHHHHH Q ss_conf 656765230586665210121123--784439999999998539997999999999 Q gi|254780370|r 347 IILAISAMIEDLTVNKDRLQEAAT--KSHSTATDLADWLVSHAGLPFREAHYITGC 400 (473) Q Consensus 347 ~L~l~~~li~~l~vn~erm~~~~~--~~~~~AT~lAd~Lv~~~GipFReAH~iVg~ 400 (473) T Consensus 321 ~l~~~~~ll~~l~vn~~~m~~nl~~~~g~i~ae~~~~~L~~-~Gi~~~~Ah~iV~e 375 (381) T cd01595 321 ALSRLQGLLEGLVVNPERMRRNLDLTWGLILSEAVMMALAK-KGLGRQEAYELVKE 375 (381) T ss_pred HHHHHHHHHCCCEECHHHHHHHHHCCCCHHHHHHHHHHHHH-CCCCHHHHHHHHHH T ss_conf 99999998774999999999998724687799999999988-39987789999999 |
These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). pCMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone, in the beta-ketoadipate pathway. ASL deficiency has bee |
>pfam00206 Lyase_1 Lyase | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=580.46 Aligned_cols=295 Identities=35% Similarity=0.477 Sum_probs=283.1 Q ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC-CCEECCCCCCHHH Q ss_conf 323843469999842550789999999999999999999987999989999999999999966645-9800156646379 Q gi|254780370|r 16 GRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVD-GSFVFSRDLEDIH 94 (473) Q Consensus 16 grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~-~~~~~~~~~edvh 94 (473) T Consensus 1 Gr~~~~~~~l~~~ft~~~~~~~rl~~~dI~~~~a~~~~la~~~~i~~~~~~~I~~al~~i~~~~~~~~~f~i~~~~e~~~ 80 (312) T pfam00206 1 GRFTVPADALMGIFTDRSRFNFRLSEEDIKGLAALKKAAAKANVLLKEEAAAIIKALDEVAEEGKADDAFVLKVIQEGSG 80 (312) T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC T ss_conf 98588479999998389880881207589999999999998599998999999999999984222389703362147678 Q ss_pred HHHHHHHHHHHHC-------CCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH Q ss_conf 9999999731110-------2342014410112378879999999999-9986778899999744773014520016653 Q gi|254780370|r 95 MNIEARLTSLIGS-------IAGKMHTARSRNDQVALDLRLWIKEKTL-EITNDLKKLLTILLDKAEEHHNTIMPGFTHL 166 (473) Q Consensus 95 ~~iE~~l~~~~G~-------~~~~lH~grSrND~~~t~~rl~lr~~l~-~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~ 166 (473) T Consensus 81 ~~i~~~l~e~i~~~~~~~~~~~~~vH~g~SsnD~~~Ta~~L~~~~~l~~~l~~~l~~l~~~L~~~A~~~~~~~m~GrTHl 160 (312) T pfam00206 81 TAVNMNLNEVIGELLGQLVHPNDKVHTGQSSNDQVPTALRLALKLALSEVLLPALGQLIDALKEKAKEFADVVKPGRTHL 160 (312) T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC T ss_conf 89999999997623477788534443887712218889999999999999999999999999999998567611365466 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH-------HHHHHCCCCCCCCCHHHHCC Q ss_conf 01133444567888888786206989998745423356532033566678998-------96310387643478567302 Q gi|254780370|r 167 QTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRH-------FTAKELGFREPTRNSIDSVS 239 (473) Q Consensus 167 Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~-------~~a~~LGf~~~~~ns~dav~ 239 (473) T Consensus 161 Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lggaa~~gt~~~~d~~~~~~~~~~l~~~~g~~~~~~n~~~~~~ 240 (312) T pfam00206 161 QDATPVTLGQELSGYAVALTRDLERLKQLLPRILVEPLGGGTAVGTGLNADPEFAELLAKELGFFTGLPVPAPNSFEATS 240 (312) T ss_pred CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH T ss_conf 21320119999999999999999999999999979876289986776678820799999999998489988878888872 Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHH Q ss_conf 788642467776887664899999999984124561540455456-53004443360138998766899975 Q gi|254780370|r 240 DRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFST-GSSIMPQKRNPDGAELVRAKTGRING 310 (473) Q Consensus 240 sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~~~-GSSiMPqKrNP~~~E~ir~~a~~~~g 310 (473) T Consensus 241 ~rD~~~e~~~~l~~~~~~L~kia~Di~l~~s~e~g~~~~~~~~~~~GSSiMP~K~NP~~~E~~~g~~~~v~G 312 (312) T pfam00206 241 DRDAVVEFSGALALLATHLSKFANDLRLLSSGPFGFVELSLAEGEPGSSIMPGKVNPDQLELLRGKAGRVFG 312 (312) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCHHCCCC T ss_conf 445999999999999999999999999980888795772389999866788998596598998481441229 |
|
>cd01334 Lyase_I Lyase class I family of the Lyase_I superfamily | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=544.32 Aligned_cols=317 Identities=26% Similarity=0.316 Sum_probs=292.9 Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHCC----CCCCCCCC Q ss_conf 99999999999999987999989999999999999966645980015664637999999997311102----34201441 Q gi|254780370|r 41 EQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSI----AGKMHTAR 116 (473) Q Consensus 41 ~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~~edvh~~iE~~l~~~~G~~----~~~lH~gr 116 (473) T Consensus 2 ~~~l~ve~A~a~a~~~~G~Ip~~~a~~I~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~e~~~~~~~~vH~G~ 81 (330) T cd01334 2 RYMVEVEVALAKALEELGLIPKSAAEEIRSAADEFSEKFKKDVKEQEGSTTHDVMAFNEVLKELIGEAGGDAARFVHYGA 81 (330) T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC T ss_conf 13899999999999883989999999999999998724120242001577865029999999998774666315463798 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 01123788799999999999986778899999744773014520016653011334445678888887862069899987 Q gi|254780370|r 117 SRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSI 196 (473) Q Consensus 117 SrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~ 196 (473) T Consensus 82 TsnDi~dTa~~l~~r~al~~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rl~~~~ 161 (330) T cd01334 82 TSNDVLDTAFPLAIRDALKILLPALQQLIETLAEKALKYKDVVMMGRTHLQDASPITLGQEILGWAYELKRDLDRLEEVK 161 (330) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 82538999999999999999999999999999999998167701131115757772199999999999999999999999 Q ss_pred HHHHHHHHHHHCCCCCCC----CCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 454233565320335666----7899896310387643478567302788642467776887664899999999984124 Q gi|254780370|r 197 ERLDECPLGAAALAGTSF----PIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQ 272 (473) Q Consensus 197 ~~~~~~pLG~~A~~GT~~----~idr~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e 272 (473) T Consensus 162 ~~~~~~~lgGavGt~~~~~~~~~~~~~~~a~~Lgl~~~~~~~~~-~~~rd~~~e~~~~l~~~a~~l~kia~Di~~l~~~e 240 (330) T cd01334 162 ERVLFLGLGGAVGTGASTYPDPSEVRERVAKELGLAVRALNTTQ-ISERDAMVELHSALKLLAAILSKIARDIRLLSSGE 240 (330) T ss_pred HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 98867376499987671389789999999998278776868898-82871799999999999999999999999985445 Q ss_pred CCCEECCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCH---HHHHHHHHHHHHHHHHHH Q ss_conf 5615404554-565300444336013899876689997523358767404840000100---100557988999999865 Q gi|254780370|r 273 FNFVRLSDAF-STGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDM---QEDKEPVFDALETLQIII 348 (473) Q Consensus 273 ~~~i~l~~~~-~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDl---q~~~~~l~~ai~~~~~~L 348 (473) T Consensus 241 ~~e~~~p~~~~~~GSS~MP~K~NPv~~E~i~~~a~~v~g~~~~~~~---~~~~~~erd~~~~~~e~~~~~~~~~~l~~~l 317 (330) T cd01334 241 IGEVKEPEAKGQGGSSAMPHKVNPIASERVTALARRVIANDESILM---NLALGHLRDLVDSPVERNAIPDVVHTLTAVL 317 (330) T ss_pred CCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH T ss_conf 5848766678997768889885978999999999999827999998---7212556214687989999999999999999 Q ss_pred HHHHHHHCCCEEC Q ss_conf 6765230586665 Q gi|254780370|r 349 LAISAMIEDLTVN 361 (473) Q Consensus 349 ~l~~~li~~l~vn 361 (473) T Consensus 318 ~~~~~~~~gl~vN 330 (330) T cd01334 318 ETALGVCKGLEVN 330 (330) T ss_pred HHHHHHHCCCEEC T ss_conf 9999987548849 |
This family contains proteins similar to class II fumarase, aspartase, adenylosuccinate lyase (ASL), argininosuccinate lyase (ASAL), and 3-carboxy-cis,cis-muconate lactonizing (CMLE) enzyme. Proteins of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. |
>cd01594 Lyase_I_like Lyase class I_like | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=322.40 Aligned_cols=222 Identities=36% Similarity=0.467 Sum_probs=208.7 Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHC-CCCCC-----CC Q ss_conf 9999999999999998799998999999999999996664598001566463799999999731110-23420-----14 Q gi|254780370|r 41 EQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGS-IAGKM-----HT 114 (473) Q Consensus 41 ~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~~edvh~~iE~~l~~~~G~-~~~~l-----H~ 114 (473) T Consensus 2 ra~~~v~~a~~~~~------------------------------------------i~~~L~~~~~~~~~~~~~~~~~~~ 39 (231) T cd01594 2 RADLLVELAAALAL------------------------------------------VEEVLAGRAGELAGGLHGSALVHK 39 (231) T ss_pred CHHHHHHHHHHHHH------------------------------------------HHHHHHHHHHHHHCCCCCCCCCCC T ss_conf 24789879999999------------------------------------------999999999998678898777788 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 41011237887999999999999867788999997447730145200166530113344456788888878620698999 Q gi|254780370|r 115 ARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFD 194 (473) Q Consensus 115 grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~ 194 (473) T Consensus 40 ~~s~~d~~~t~~~~~~~~~l~~~~~~l~~~~~~l~~~ae~~~~~~~~~~th~q~A~p~t~g~~l~~~~~~l~~~~~~l~~ 119 (231) T cd01594 40 GRSSNDIGTTALRLALRDALDDLLPLLKALIDALALKAEAHKGTVMPGRTHLQDAQPVTLGYELRAWAQVLGRDLERLEE 119 (231) T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHH T ss_conf 98811399999999999999999999999999999999981798633644676773120999999999999999999998 Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 87454233565320335666789989631038764347856730278864246777688766489999999998412456 Q gi|254780370|r 195 SIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFN 274 (473) Q Consensus 195 ~~~~~~~~pLG~~A~~GT~~~idr~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~ 274 (473) T Consensus 120 ~-----------------------------------------------~~a~~~~~l~~~~~~l~~ia~d~~~~~~~~~~ 152 (231) T cd01594 120 A-----------------------------------------------AVAEALDALALAAAHLSKIAEDLRLLLSGEFG 152 (231) T ss_pred H-----------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC T ss_conf 5-----------------------------------------------89999999999999899999999998576755 Q ss_pred CEECCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 1540455-4565300444336013899876689997523358767404840000100100557988999999865676 Q gi|254780370|r 275 FVRLSDA-FSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAI 351 (473) Q Consensus 275 ~i~l~~~-~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~~~~l~~ai~~~~~~L~l~ 351 (473) T Consensus 153 ~~~~~~~~~~~gSS~mp~K~Np~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~ 230 (231) T cd01594 153 ELGEPFLPGQPGSSIMPQKVNPVAAELVRGLAGLVIGNLVAVLTALKGGPERDNEDSPSMREILADSLLLLIDALRLL 230 (231) T ss_pred CEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 431355667886667898879669999999999998239999999845714776558978998998999999999975 |
Lyase class I_like superfamily of enzymes that catalyze beta-elimination reactions and are active as homotetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. This superfamily contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase. The lyase class I family comprises proteins similar to class II fumarase, aspartase, adenylosuccinate lyase, argininosuccinate lyase, and 3-carboxy-cis, cis-muconate lactonizing enzyme which, for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. Histidine or phenylalanine ammonia-lyase catalyze a beta-elimination of ammonia from histidine and phenylalanine, respectively. |
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional | Back alignment and domain information |
---|
Probab=100.00 E-value=0 Score=423.73 Aligned_cols=327 Identities=18% Similarity=0.198 Sum_probs=262.5 Q ss_pred HHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCC Q ss_conf 32033238434699998425507899999999999999999999879999899999999999999666459800156646 Q gi|254780370|r 12 QMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLE 91 (473) Q Consensus 12 ~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~~~e 91 (473) T Consensus 9 ~l~~~~y~--~~em~~ifS-----de~~~~~~l~vE~Ala~Aqa~lG~IP~~aa~~I~~~~~~~~~d~~~l~---~~~~~ 78 (353) T PRK05975 9 PFLSGLFG--DDEIAALFS-----AEADIAAMLAFEAALAEAEAEHGIIPAEAAERIAAACETFEPDLAALR---HATAR 78 (353) T ss_pred HHHHHHCC--CHHHHHHHC-----HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHH---HHHHH T ss_conf 76662029--999998809-----199999999999999999998799999999999986013357899999---89874 Q ss_pred HHH--HHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH Q ss_conf 379--999999973111-02342014410112378879999999999998677889999974477301452001665301 Q gi|254780370|r 92 DIH--MNIEARLTSLIG-SIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQT 168 (473) Q Consensus 92 dvh--~~iE~~l~~~~G-~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~ 168 (473) T Consensus 79 ~g~~v~a~v~~l~~~~~~~a~~~vH~GaTSqDV~DTa~~L~lr~al~~i~~~L~~l~~~L~~la~~h~~t~m~GRThgq~ 158 (353) T PRK05975 79 DGVVVPALVRQLRAAVGEEAAAHVHFGATSQDVIDTSLMLRLKAAVEILAARLGALIEALDALEATFGGNALTGHTRMQA 158 (353) T ss_pred CCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC T ss_conf 48618999999998658676736128985421787899999999999999999999999999999861675000314762 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----HHHHHHHCCCCCCC-CCHHHHCCCCCC Q ss_conf 1334445678888887862069899987454233565320335666789----98963103876434-785673027886 Q gi|254780370|r 169 AQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPID----RHFTAKELGFREPT-RNSIDSVSDRDF 243 (473) Q Consensus 169 A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~id----r~~~a~~LGf~~~~-~ns~dav~sRd~ 243 (473) T Consensus 159 A~P~TfG~k~a~w~~el~r~~~rl~~~~~~~~~~~~~GAvGt~a~~~~~~~~v~~~~a~~LgL~~~~~~~-----~~Rd~ 233 (353) T PRK05975 159 AIPITVADRLASWRAPLARHRDRLEALRPDVFPVQFGGAAGTLEKLGGKAAAVRAELAKRLGLEDPPQWH-----SQRDF 233 (353) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCHHHHHHHHHHHCCCCCCCCCC-----CCCCH T ss_conf 6011599999999999999999999999866665046621210035762899999999875999987501-----02132 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 42467776887664899999999984124561540455456530044433601389987668999752335876740484 Q gi|254780370|r 244 ILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLP 323 (473) Q Consensus 244 ~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p 323 (473) T Consensus 234 ~~e~~~~La~ia~sl~kia~di~~l~~~~-~--E~~~~g~~GSSaMPhKrNPi~~E~i~~laR~~~~~~~~~~~---a~~ 307 (353) T PRK05975 234 IADFGHLLSLVTGSLGKFGQDIALMAQLG-D--EISLSGGGGSSAMPHKQNPVAAETLVTLARFNATQVSGLHQ---ALV 307 (353) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C--CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH---HHH T ss_conf 99999999999999999999999985035-1--15357898877788765838899999999878877878987---441 Q ss_pred CHHCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCE Q ss_conf 00001001---0055798899999986567652305866 Q gi|254780370|r 324 LAYSKDMQ---EDKEPVFDALETLQIIILAISAMIEDLT 359 (473) Q Consensus 324 ~~~~rDlq---~~~~~l~~ai~~~~~~L~l~~~li~~l~ 359 (473) T Consensus 308 ~~~ER~~~~w~~Ew~~lP~~~~~~~~~L~~a~~ll~~Lv 346 (353) T PRK05975 308 HEQERSGAAWTLEWMILPQMVAATGAALRLAAELAGNIV 346 (353) T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 030046861678999999999999999999999998288 |
|
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase; InterPro: IPR012789 Proteins in this entry are 3-carboxy-cis,cis-muconate cycloisomerases, which catalyse the second step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA | Back alignment and domain information |
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Probab=100.00 E-value=0 Score=410.12 Aligned_cols=329 Identities=22% Similarity=0.247 Sum_probs=275.5 Q ss_pred HCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCC Q ss_conf 2033238434699998425507899999999999999999999879-999899999999999999666459800156646 Q gi|254780370|r 13 MWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQG-IISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLE 91 (473) Q Consensus 13 lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~g-ii~~~~~~~i~~al~~i~~~~~~~~~~~~~~~e 91 (473) T Consensus 1 L~~g~fg~~~--~~~~fs-----D~A~l~Aml~fEaALa~A~A~~Ga~iP~~Aa~~i~a~~~~~~~D~~~L~~-~~A~~G 72 (351) T TIGR02426 1 LLDGLFGDPA--ALELFS-----DRAFLRAMLDFEAALARAQADVGALIPAEAAEAIEAACAEAAPDLEALAE-AAAEAG 72 (351) T ss_pred CCCCCCCCHH--HHHHCC-----HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHCC T ss_conf 9998888407--887518-----49999999999999999885228989788999999999877877999999-986189 Q ss_pred HHHHHHHHHHHHHHH----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH Q ss_conf 379999999973111----0234201441011237887999999999999867788999997447730145200166530 Q gi|254780370|r 92 DIHMNIEARLTSLIG----SIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQ 167 (473) Q Consensus 92 dvh~~iE~~l~~~~G----~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q 167 (473) T Consensus 73 n~vipLV~~L~~~va~hd~~aa~~VH~GATSQDviDT~LML~lr~a~~l~~adl~~L~~~La~La~~hr~tpm~grTl~Q 152 (351) T TIGR02426 73 NPVIPLVKALRKAVAEHDPEAARYVHRGATSQDVIDTALMLQLRDALDLLLADLGRLADALADLAARHRDTPMTGRTLLQ 152 (351) T ss_pred CCCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCC T ss_conf 98725899888863378721251026787357699999999999999999998999999999999973778873000001 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCCC---CCC-HHHHHHHCCCCCC--CCCHHH Q ss_conf 1133444567888888786206989998745423356532033-----5666---789-9896310387643--478567 Q gi|254780370|r 168 TAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALA-----GTSF---PID-RHFTAKELGFREP--TRNSID 236 (473) Q Consensus 168 ~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~-----GT~~---~id-r~~~a~~LGf~~~--~~ns~d 236 (473) T Consensus 153 ~A~P~T~G~k~AgWL~~v~ra~~RL~~l~~~~l~lQfGGAaGTLaa~~~~~G~~D~~~va~aLA~~LgL~~P~~pWHt-- 230 (351) T TIGR02426 153 QAVPTTFGLKAAGWLAAVLRARDRLAALRTEALPLQFGGAAGTLAALLETRGATDALAVAAALAARLGLPLPALPWHT-- 230 (351) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC-- T ss_conf 156799998863268899999999998764143101460689999850688899837899999986076778888763-- Q ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 30278864246777688766489999999998412456154045545--6530044433601389987668999752335 Q gi|254780370|r 237 SVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFS--TGSSIMPQKRNPDGAELVRAKTGRINGALLS 314 (473) Q Consensus 237 av~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~~--~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~ 314 (473) T Consensus 231 ---~R~~ia~~g~~Lal~aGalGKia~Dv~ll~~~E~gE~~EP-~~gGkGGSSaMPHKrNPV~a~~~~~aA~r~P~L~AT 306 (351) T TIGR02426 231 ---QRDRIADFGAALALVAGALGKIAGDVALLSQTEVGEVFEP-AGGGKGGSSAMPHKRNPVGAVLLLAAARRAPGLAAT 306 (351) T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf ---1479999999999998656788999999987767875068-888689887881003738999999999886999999 Q ss_pred HHH-HHHCCCCHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 876-740484000010---01005579889999998656765230586 Q gi|254780370|r 315 LLT-IMKGLPLAYSKD---MQEDKEPVFDALETLQIIILAISAMIEDL 358 (473) Q Consensus 315 ~~~-~~~~~p~~~~rD---lq~~~~~l~~ai~~~~~~L~l~~~li~~l 358 (473) T Consensus 307 L~~aal---~~~~ERs~G~WhaEW~~Lr~l~~lT~gAl~~~~~l~~Gl 351 (351) T TIGR02426 307 LFAAAL---AQEHERSLGGWHAEWETLRELVRLTAGALRQAAELAEGL 351 (351) T ss_pred HHHHHH---CCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 988530---211126520223201356999999999999999986039 |
4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate can all be converted in one step to protocatechuate. All members of the seed alignment for this entry were chosen from within protocatechuate degradation operons of at least three genes of the pathway, and from genomes with the complete pathway through beta-ketoadipate.; GO: 0047472 3-carboxy-ciscis-muconate cycloisomerase activity, 0019619 protocatechuate catabolic process. |
>pfam10397 ADSL_C Adenylosuccinate lyase C-terminus | Back alignment and domain information |
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Probab=98.34 E-value=2e-06 Score=61.85 Aligned_cols=80 Identities=14% Similarity=0.016 Sum_probs=66.1 Q ss_pred CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCC Q ss_conf 78443999999999853999799999999999999982989689899999940011326899965999999621489999 Q gi|254780370|r 371 KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGT 450 (473) Q Consensus 371 ~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v~~R~s~GGt 450 (473) T Consensus 1 ~Gli~Se~vml~L~-~~glgR~~Ah~lVq~~a~~a~~~~~~l~e~l~~d~~i~~~l~~~el~~l~dp~~yl-------g~ 72 (81) T pfam10397 1 GGLIFSERVLLALA-EKGLGREEAYELVQRAAMKAWEEGRDLREVLLADPEVAAYLSEEELDALFDPAYYL-------GH 72 (81) T ss_pred CCHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHCCHHHHHHHCCHHHHH-------HH T ss_conf 95388999999998-80898899999999999999883986999987098999774699999873999999-------72 Q ss_pred CHHHHHHH Q ss_conf 98999999 Q gi|254780370|r 451 CAAEVLKQ 458 (473) Q Consensus 451 ap~~V~~~ 458 (473) T Consensus 73 ~~~i~~rv 80 (81) T pfam10397 73 ADEIVDRV 80 (81) T ss_pred HHHHHHHH T ss_conf 89999875 |
This is the C-terminal seven alpha helices of the structure whose full length represents the enzyme adenylosuccinate lyase. This sequence lies C-terminal to the conserved motif necessary for beta-elimination reactions, Adenylosuccinate lyase catalyses two steps in the synthesis of purine nucleotides: the conversion of succinylaminoimidazole-carboxamide ribotide into aminoimidazole-carboxamide ribotide, the eighth step of the de novo pathway, and the formation of adenosine monophosphate (AMP) from adenylosuccinate, the second step in the conversion of inosine monophosphate into AMP. |
>pfam08328 ASL_C Adenylosuccinate lyase C-terminal | Back alignment and domain information |
---|
Probab=95.90 E-value=0.019 Score=35.63 Aligned_cols=105 Identities=12% Similarity=0.084 Sum_probs=67.0 Q ss_pred CCCHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH Q ss_conf 01001005--5798899999986567652305866652101211237844399999999985399979999999999999 Q gi|254780370|r 327 SKDMQEDK--EPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSL 404 (473) Q Consensus 327 ~rDlq~~~--~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~ 404 (473) T Consensus 4 QRDLsDSTvlRNiGvafg~s~ia~~s~~kGL~ki~~N~~~i~~dL~~~weVLaEaiQtiLR~~g~~--~~YE~lK~lTR- 80 (115) T pfam08328 4 QRDLTDSTVLRNLGVAFGHSLIAYDSLLKGLGKLEVNEARLAADLDANWEVLAEPIQTVMRRYGIP--NPYEKLKELTR- 80 (115) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CHHHHHHHHHC- T ss_conf 544405589985008999999999999989875015799999999977899999999999981999--89999999866- Q ss_pred HHHCCCCHHHCCHHHHHHHHHCC--CHHHH---HHCCHHHHH Q ss_conf 99829896898999999400113--26899---965999999 Q gi|254780370|r 405 AEKNQCELAKLPLAMLQQISPVI--TSAVY---DILKVESSI 441 (473) Q Consensus 405 A~~~g~~l~el~~~~~~~~~~~~--~~di~---~~ldp~~~v 441 (473) T Consensus 81 ----Gk~---i~~~~~~~fI~~L~i~~~~k~~Ll~LtP~~Yi 115 (115) T pfam08328 81 ----GKR---ITKEDLREFIDGLDIPEEAKARLLALTPATYI 115 (115) T ss_pred ----CCC---CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC T ss_conf ----898---99999999999579999999999828703209 |
This domain is found at the C-terminus of adenylosuccinate lyase(ASL; PurB in E. coli). It has been identified in bacteria, eukaryotes and archaea and is found together with the lyase domain pfam00206. ASL catalyses the cleavage of succinylaminoimidazole carboxamide ribotide to aminoimidazole carboxamide ribotide and fumarate and the cleavage of adenylosuccinate to adenylate and fumarate. |
>KOG2700 consensus | Back alignment and domain information |
---|
Probab=94.66 E-value=0.37 Score=27.22 Aligned_cols=37 Identities=19% Similarity=-0.116 Sum_probs=25.4 Q ss_pred HHHHHHH-HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9997447-7301452001665301133444567888888 Q gi|254780370|r 146 TILLDKA-EEHHNTIMPGFTHLQTAQPVTFGHHCMAYVE 183 (473) Q Consensus 146 ~~L~~~A-~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~ 183 (473) T Consensus 217 ~~ld~Lv~k~~gf~~~~~~T-GQt~sr~~~~~~~~~la~ 254 (481) T KOG2700 217 EKLDSLVTKELGFVPMYIVT-GQTYSRKTDAEEVAPLAS 254 (481) T ss_pred HHHHHHHHHHHCCCCCCCCC-CCCCCCHHHHHHHHHHHH T ss_conf 98999999981888655445-886783157899999998 |
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Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch
Homologous Structures Detected by PSI-BLAST against Nonredundant Database
Identity | Alignment graph | Length | Definition | E-value |
Target | 473 | argininosuccinate lyase [Candidatus Liberibacter asiati | ||
2e9f_A | 462 | Crystal Structure Of T.Th.Hb8 Argininosuccinate Lya | 1e-113 | |
1k7w_A | 468 | Crystal Structure Of S283a Duck Delta 2 Crystallin | 1e-110 | |
1auw_A | 468 | H91n Delta 2 Crystallin From Duck Length = 468 | 1e-110 | |
1aos_A | 464 | Human Argininosuccinate Lyase Length = 464 | 1e-109 | |
1hy1_A | 468 | Crystal Structure Of Wild Type Duck Delta 2 Crystal | 1e-109 | |
1tj7_A | 457 | Structure Determination And Refinement At 2.44 A Re | 1e-109 | |
2e9f_B | 454 | Crystal Structure Of T.Th.Hb8 Argininosuccinate Lya | 1e-109 | |
1k62_A | 464 | Crystal Structure Of The Human Argininosuccinate Ly | 1e-109 | |
1tju_A | 474 | Crystal Structure Of T161s Duck Delta 2 Crystallin | 1e-108 | |
1tjv_A | 474 | Crystal Structure Of T161d Duck Delta 2 Crystallin | 1e-108 | |
1u15_A | 472 | Crystal Structure Of A Duck-Delta-Crystallin-1 Doub | 1e-107 | |
1xwo_A | 465 | Crystal Structrue Of Goose Delta Crystallin Length | 1e-103 | |
1hy0_A | 466 | Crystal Structure Of Wild Type Duck Delta 1 Crystal | 1e-101 | |
1dcn_A | 447 | Inactive Mutant H162n Of Delta 2 Crystallin With Bo | 1e-100 | |
1i0a_A | 466 | Crystal Structure Of Wild Type Turkey Delta 1 Cryst | 2e-96 | |
2x75_A | 431 | Staphylococcus Aureus Adenylosuccinate Lyase Length | 6e-34 | |
1f1o_A | 431 | Structural Studies Of Adenylosuccinate Lyases Lengt | 9e-33 | |
2pfm_A | 444 | Crystal Structure Of Adenylosuccinate Lyase (Purb) | 1e-32 | |
1q5n_A | 454 | Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate | 2e-32 | |
1j3u_A | 468 | Crystal Structure Of Aspartase From Bacillus Sp. Ym | 1e-31 | |
1kq7_A | 467 | E315q Mutant Form Of Fumarase C From E.Coli Length | 5e-29 | |
1fuo_A | 467 | Fumarase C With Bound Citrate Length = 467 | 7e-29 | |
2fus_A | 467 | Mutations Of Fumarase That Distinguish Between The | 1e-28 | |
1fup_A | 472 | Fumarase With Bound Pyromellitic Acid Length = 472 | 2e-28 | |
1fur_A | 467 | Fumarase Mutant H188n With Bound Substrate L-Malate | 3e-28 | |
1c3u_A | 431 | T. Maritima Adenylosuccinate Lyase Length = 431 | 2e-27 | |
1vdk_A | 466 | Crystal Structure Of Fumarase From Thermus Thermoph | 8e-27 | |
1c3c_A | 429 | T. Maritima Adenylosuccinate Lyase Length = 429 | 9e-27 | |
3ocf_A | 478 | Crystal Structure Of Fumarate Lyase:delta Crystalli | 5e-23 | |
3oce_A | 474 | Crystal Structure Of Fumarate Lyase:delta Crystalli | 6e-23 | |
3no9_A | 475 | Crystal Structure Of Apo Fumarate Hydratase From My | 4e-18 | |
3qbp_A | 478 | Crystal Structure Of Fumarase Fum From Mycobacteriu | 5e-17 | |
3rrp_A | 471 | Crystal Structure Of Fumarate Hydratase Fum From My | 1e-11 | |
3c8t_A | 451 | Crystal Structure Of Fumarate Lyase From Mesorhizob | 9e-31 | |
1re5_A | 450 | Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lac | 2e-25 | |
1jsw_A | 478 | Native L-Aspartate Ammonia Lyase Length = 478 | 1e-23 | |
1yfm_A | 488 | Recombinant Yeast Fumarase Length = 488 | 8e-23 | |
3e04_A | 490 | Crystal Structure Of Human Fumarate Hydratase Lengt | 7e-22 | |
3gtd_A | 482 | 2.4 Angstrom Crystal Structure Of Fumarate Hydratas | 2e-21 | |
2vd6_A | 503 | Human Adenylosuccinate Lyase In Complex With Its Su | 2e-11 | |
2j91_A | 503 | Crystal Structure Of Human Adenylosuccinate Lyase I | 3e-11 | |
3bhg_A | 459 | Crystal Structure Of Adenylosuccinate Lyase From Le | 7e-05 | |
3gzh_A | 482 | Crystal Structure Of Phosphate-Bound Adenylosuccina | 0.001 | |
2fel_A | 359 | 3-Carboxy-Cis,Cis-Muconate Lactonizing Enzyme From | 5e-14 | |
1dof_A | 403 | The Crystal Structure Of Adenylosuccinate Lyase Fro | 6e-11 | |
1yis_A | 478 | Structural Genomics Of Caenorhabditis Elegans: Aden | 1e-08 | |
2qga_B | 465 | Plasmodium Vivax Adenylosuccinate Lyase Pv003765 Wi | 8e-06 | |
2hvg_A | 482 | Crystal Structure Of Adenylosuccinate Lyase From Pl | 3e-05 |
gi|157834857|pdb|2E9F|A Chain A, Crystal Structure Of T.Th.Hb8 Argininosuccinate Lyase Complexed With L-Arginine Length = 462 | Back alignment and structure |
Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 218/458 (47%), Positives = 306/458 (66%), Gaps = 3/458 (0%) Query: 10 VNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKII 69 ++ WGGRF P + + N S+ FD+ L+ +D+ ++VH ML G++S+EE + I+ Sbjct: 2 AHRTWGGRFGEGPDALAARFNASLAFDRALWREDLWQNRVHARMLHAVGLLSAEELEAIL 61 Query: 70 EGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLW 129 +GL I EI G+F + +LED+HMN+EARLT L+G GK+HTARSRNDQVA DLRL+ Sbjct: 62 KGLDRIEEEIEAGTFPWREELEDVHMNLEARLTELVGPPGGKLHTARSRNDQVATDLRLY 121 Query: 130 IKEKTLEITNDLKKLLTILLDKAEEHHNTIM--PGFTHLQTAQPVTFGHHCMAYVEMFGR 187 ++ E+ L L +L+ +AE+H + + PG+THLQ AQPV H +AY EM R Sbjct: 122 LRGAIDELLALLLALRRVLVREAEKHLDPLYVLPGYTHLQRAQPVLLAHWFLAYYEMLKR 181 Query: 188 DISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILEC 247 D R D+ ERL+E PLGAAALAGT FPIDRHFTA+ELGF+ P RNS+D+V+ RDF LE Sbjct: 182 DAGRLEDAKERLNESPLGAAALAGTGFPIDRHFTARELGFKAPMRNSLDAVASRDFALEV 241 Query: 248 LSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGR 307 LS I +H+SR+AEE+IL+ST +F FV + DAF+TGSSIMPQK+NPD EL+RAK GR Sbjct: 242 LSALNIGMLHLSRMAEELILYSTEEFGFVEVPDAFATGSSIMPQKKNPDILELIRAKAGR 301 Query: 308 INGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQE 367 + GA + L ++KGLPLAY+KD+QEDKEP+ DAL T + + ++A++ L ++R+ Sbjct: 302 VLGAFVGLSAVVKGLPLAYNKDLQEDKEPLLDALATYRDSLRLLAALLPGLKWRRERMWR 361 Query: 368 AATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVI 427 AA ++ AT+LAD+L GLPFREAH++ G V + L L L LQ P+ Sbjct: 362 AAEGGYTLATELADYLA-EKGLPFREAHHVVGRLVRRLVEEGRALKDLTLEELQAHHPLF 420 Query: 428 TSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNR 465 +L++E++I R+S+GGT V +++ + Sbjct: 421 AEDALPLLRLETAIHRRRSYGGTAPEAVRERLEEAKKE 458 |
>gi|20150709|pdb|1K7W|A Chain A, Crystal Structure Of S283a Duck Delta 2 Crystallin Mutant Length = 468 | Back alignment and structure |
Score = 403 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 195/462 (42%), Positives = 291/462 (62%), Gaps = 2/462 (0%) Query: 11 NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70 +++WGGRFS S IMEK+N SI +D++L E DI GS + L K GI++ E +KI+ Sbjct: 8 DKLWGGRFSGSTDPIMEKLNSSIAYDQRLSEVDIQGSMAYAKALEKAGILTKTELEKILS 67 Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130 GL+ I E G FV + EDIH E RL LIG IAGK+HT RSRNDQV DL+L++ Sbjct: 68 GLEKISEEWSKGVFVVKQSDEDIHTANERRLKELIGDIAGKLHTGRSRNDQVVTDLKLFM 127 Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 K I+ L +L+ L+++A + I+PG+THLQ AQP+ + +++ RD Sbjct: 128 KNSLSIISTHLLQLIKTLVERAAIEIDVILPGYTHLQKAQPIRWSQFLLSHAVALTRDSE 187 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 R + +R++ PLG+ ALAG IDR EL F + NS+D++S+RDF++E LS Sbjct: 188 RLGEVKKRINVLPLGSGALAGNPLDIDREMLRSELEFASISLNSMDAISERDFVVEFLSF 247 Query: 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 + + +H+S++AE++I++ST +F F+ LSDAFSTG+S+MPQK+NPD EL+R+K GR+ G Sbjct: 248 ATLLMIHLSKMAEDLIIYSTSEFGFLTLSDAFSTGASLMPQKKNPDSLELIRSKAGRVFG 307 Query: 311 ALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT 370 L S+L ++KGLP Y+KD+QEDKE VFD ++TL ++ + +I L ++K+ +++A T Sbjct: 308 RLASILMVLKGLPSTYNKDLQEDKEAVFDVVDTLTAVLQVATGVISTLQISKENMEKALT 367 Query: 371 KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSA 430 ATDLA +LV G+PFR+AH +G V LAE + KL L L+ ISP +S Sbjct: 368 -PEMLATDLALYLV-RKGVPFRQAHTASGKAVHLAETKGITINKLSLEDLKSISPQFSSD 425 Query: 431 VYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNIPKK 472 V + +S+ + GGT + V Q+ R ++ ++ Sbjct: 426 VSQVFNFVNSVEQYTALGGTAKSSVTTQIEQLRELMKKQKEQ 467 |
>gi|2981709|pdb|1AUW|A Chain A, H91n Delta 2 Crystallin From Duck Length = 468 | Back alignment and structure |
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 194/462 (41%), Positives = 290/462 (62%), Gaps = 2/462 (0%) Query: 11 NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70 +++WGGRFS S IMEK+N SI +D++L E DI GS + L K GI++ E +KI+ Sbjct: 8 DKLWGGRFSGSTDPIMEKLNSSIAYDQRLSEVDIQGSMAYAKALEKAGILTKTELEKILS 67 Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130 GL+ I E G FV + EDI+ E RL LIG IAGK+HT RSRNDQV DL+L++ Sbjct: 68 GLEKISEEWSKGVFVVKQSDEDINTANERRLKELIGDIAGKLHTGRSRNDQVVTDLKLFM 127 Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 K I+ L +L+ L+++A + I+PG+THLQ AQP+ + +++ RD Sbjct: 128 KNSLSIISTHLLQLIKTLVERAAIEIDVILPGYTHLQKAQPIRWSQFLLSHAVALTRDSE 187 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 R + +R++ PLG+ ALAG IDR EL F + NS+D++S+RDF++E LS Sbjct: 188 RLGEVKKRINVLPLGSGALAGNPLDIDREMLRSELEFASISLNSMDAISERDFVVEFLSF 247 Query: 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 + + +H+S++AE++I++ST +F F+ SDAFSTGSS+MPQK+NPD EL+R+K GR+ G Sbjct: 248 ATLLMIHLSKMAEDLIIYSTSEFGFLTDSDAFSTGSSLMPQKKNPDSLELIRSKAGRVFG 307 Query: 311 ALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT 370 L S+L ++KGLP Y+KD+QEDKE VFD ++TL ++ + +I L ++K+ +++A T Sbjct: 308 RLASILMVLKGLPSTYNKDLQEDKEAVFDVVDTLTAVLQVATGVISTLQISKENMEKALT 367 Query: 371 KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSA 430 ATDLA +LV G+PFR+AH +G V LAE + KL L L+ ISP +S Sbjct: 368 -PEMLATDLALYLV-RKGVPFRQAHTASGKAVHLAETKGITINKLSLEDLKSISPQFSSD 425 Query: 431 VYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNIPKK 472 V + +S+ + GGT + V Q+ R ++ ++ Sbjct: 426 VSQVFNFVNSVEQYTALGGTAKSSVTTQIEQLRELMKKQKEQ 467 |
>gi|2914651|pdb|1AOS|A Chain A, Human Argininosuccinate Lyase Length = 464 | Back alignment and structure |
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 186/464 (40%), Positives = 284/464 (61%), Gaps = 2/464 (0%) Query: 7 SNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQ 66 ++E ++WGGRF + IMEK N SI +D+ L+E D+ GSK ++ L K G+++ E Sbjct: 2 ASESQKLWGGRFVGAVDPIMEKFNASIAYDRHLWEVDVQGSKAYSRGLEKAGLLTKAEMD 61 Query: 67 KIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDL 126 +I+ GL + E G+F + + EDIH E RL LIG+ AGK+HT RSRNDQV DL Sbjct: 62 QILHGLDKVAEEWAQGTFKLNSNDEDIHTANERRLKELIGATAGKLHTGRSRNDQVVTDL 121 Query: 127 RLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFG 186 RLW+++ ++ L +L+ ++D+AE + + PG+THLQ AQP+ + H +++ Sbjct: 122 RLWMRQTCSTLSGLLWELIRTMVDRAEAERDVLFPGYTHLQRAQPIRWSHWILSHAVALT 181 Query: 187 RDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILE 246 RD R + +R++ PLG+ A+AG +DR EL F T NS+D+ S+RDF+ E Sbjct: 182 RDSERLLEVRKRINVLPLGSGAIAGNPLGVDRELLRAELNFGAITLNSMDATSERDFVAE 241 Query: 247 CLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTG 306 L ++C H+SR+AE++IL+ T +F+FV+LSDA+STGSS+MPQK+NPD EL+R+K G Sbjct: 242 FLFWRSLCMTHLSRMAEDLILYCTKEFSFVQLSDAYSTGSSLMPQKKNPDSLELIRSKAG 301 Query: 307 RINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQ 366 R+ G LL +KGLP Y+KD+QEDKE VF+ +T+ ++ + +I L ++++ + Sbjct: 302 RVFGRCAGLLMTLKGLPSTYNKDLQEDKEAVFEVSDTMSAVLQVATGVISTLQIHQENMG 361 Query: 367 EAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPV 426 +A + ATDLA +LV G+PFR+AH +G V +AE L +L L LQ ISP+ Sbjct: 362 QALSPD-MLATDLAYYLV-RKGMPFRQAHEASGKAVFMAETKGVALNQLSLQELQTISPL 419 Query: 427 ITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNIP 470 + V + S+ + GGT + V Q+ R +Q Sbjct: 420 FSGDVICVWDYRHSVEQYGALGGTARSSVDWQIRQVRALLQAQQ 463 |
gi|14278423|pdb|1HY1|A Chain A, Crystal Structure Of Wild Type Duck Delta 2 Crystallin (Eye Lens Protein) Length = 468 | Back alignment and structure |
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 195/462 (42%), Positives = 290/462 (62%), Gaps = 2/462 (0%) Query: 11 NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70 +++WGGRFS S IMEK+N SI +D++L E DI GS + L K GI++ E +KI+ Sbjct: 8 DKLWGGRFSGSTDPIMEKLNSSIAYDQRLSEVDIQGSMAYAKALEKAGILTKTELEKILS 67 Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130 GL+ I E G FV + EDIH E RL LIG IAGK+HT RSRNDQV DL+L++ Sbjct: 68 GLEKISEEWSKGVFVVKQSDEDIHTANERRLKELIGDIAGKLHTGRSRNDQVVTDLKLFM 127 Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 K I+ L +L+ L+++A + I+PG+THLQ AQP+ + +++ RD Sbjct: 128 KNSLSIISTHLLQLIKTLVERAAIEIDVILPGYTHLQKAQPIRWSQFLLSHAVALTRDSE 187 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 R + +R++ PLG+ ALAG IDR EL F + NS+D++S+RDF++E LS Sbjct: 188 RLGEVKKRINVLPLGSGALAGNPLDIDREMLRSELEFASISLNSMDAISERDFVVEFLSF 247 Query: 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 + + +H+S++AE++I++ST +F F+ LSDAFSTGSS+MPQK+NPD EL+R+K GR+ G Sbjct: 248 ATLLMIHLSKMAEDLIIYSTSEFGFLTLSDAFSTGSSLMPQKKNPDSLELIRSKAGRVFG 307 Query: 311 ALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT 370 L S+L ++KGLP Y+KD+QEDKE VFD ++TL ++ + +I L ++K+ +++A T Sbjct: 308 RLASILMVLKGLPSTYNKDLQEDKEAVFDVVDTLTAVLQVATGVISTLQISKENMEKALT 367 Query: 371 KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSA 430 ATDLA +LV G+PFR+AH +G V LAE + KL L L+ ISP +S Sbjct: 368 -PEMLATDLALYLV-RKGVPFRQAHTASGKAVHLAETKGITINKLSLEDLKSISPQFSSD 425 Query: 431 VYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNIPKK 472 V + +S+ + GT + V Q+ R ++ ++ Sbjct: 426 VSQVFNFVNSVEQYTALAGTAKSSVTTQIEQLRELMKKQKEQ 467 |
gi|56553869|pdb|1TJ7|A Chain A, Structure Determination And Refinement At 2.44 A Resolution Of Argininosuccinate Lyase From E. Coli Length = 457 | Back alignment and structure |
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 205/455 (45%), Positives = 298/455 (65%), Gaps = 2/455 (0%) Query: 13 MWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGL 72 +WGGRF+ + ++ N S+ FD +L EQDI+GS + L G++++EE ++ E L Sbjct: 3 LWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEAL 62 Query: 73 KVIRAEI-VDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIK 131 V+ ++ + D EDIH +E +L +G + K+HT RSRNDQVA DL+LW K Sbjct: 63 NVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCK 122 Query: 132 EKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISR 191 + E+ ++L + L++ A+ + + +MPG+THLQ AQPVTF H C+AYVEM RD SR Sbjct: 123 DTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESR 182 Query: 192 FFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHS 251 D+++RLD PLG ALAGT++ IDR A LGF TRNS+DSVSDRD +LE LS + Sbjct: 183 LQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSAA 242 Query: 252 AICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGA 311 AI +H+SR AE++I ++T + FV LSD ++GSS+MPQK+NPD EL+R K GR+ GA Sbjct: 243 AIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGA 302 Query: 312 LLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATK 371 L ++ +KGLPLAY+KDMQEDKE +FDAL+T + + +++ + V + R QEAA + Sbjct: 303 LTGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQ 362 Query: 372 SHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAV 431 ++ AT+LAD+LV+ G+PFREAH+I G V A + L LPL+ LQ+ S VI V Sbjct: 363 GYANATELADYLVA-KGVPFREAHHIVGEAVVEAIRQGKPLEDLPLSELQKFSQVIDEDV 421 Query: 432 YDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRI 466 Y IL ++S + R + GG +V + + + + R+ Sbjct: 422 YPILSLQSCLDKRAAKGGVSPQQVAQAIAFAQARL 456 |
>gi|18655512|pdb|1K62|A Chain A, Crystal Structure Of The Human Argininosuccinate Lyase Q286r Mutant Length = 464 | Back alignment and structure |
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 185/464 (39%), Positives = 284/464 (61%), Gaps = 2/464 (0%) Query: 7 SNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQ 66 ++E ++WGGRF + IMEK N SI +D+ L+E D+ GSK ++ L K G+++ E Sbjct: 2 ASESGKLWGGRFVGAVDPIMEKFNASIAYDRHLWEVDVQGSKAYSRGLEKAGLLTKAEMD 61 Query: 67 KIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDL 126 +I+ GL + E G+F + + EDIH E RL LIG+ AGK+HT RSRNDQV DL Sbjct: 62 QILHGLDKVAEEWAQGTFKLNSNDEDIHTANERRLKELIGATAGKLHTGRSRNDQVVTDL 121 Query: 127 RLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFG 186 RLW+++ ++ L +L+ ++D+AE + + PG+THLQ AQP+ + H +++ Sbjct: 122 RLWMRQTCSTLSGLLWELIRTMVDRAEAERDVLFPGYTHLQRAQPIRWSHWILSHAVALT 181 Query: 187 RDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILE 246 RD R + +R++ PLG+ A+AG +DR EL F T NS+D+ S+RDF+ E Sbjct: 182 RDSERLLEVRKRINVLPLGSGAIAGNPLGVDRELLRAELNFGAITLNSMDATSERDFVAE 241 Query: 247 CLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTG 306 L ++C H+SR+AE++IL+ T +F+FV+LSDA+STGSS+MP+K+NPD EL+R+K G Sbjct: 242 FLFWRSLCMTHLSRMAEDLILYCTKEFSFVQLSDAYSTGSSLMPRKKNPDSLELIRSKAG 301 Query: 307 RINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQ 366 R+ G LL +KGLP Y+KD+QEDKE VF+ +T+ ++ + +I L ++++ + Sbjct: 302 RVFGRCAGLLMTLKGLPSTYNKDLQEDKEAVFEVSDTMSAVLQVATGVISTLQIHQENMG 361 Query: 367 EAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPV 426 +A + ATDLA +LV G+PFR+AH +G V +AE L +L L LQ ISP+ Sbjct: 362 QALSPD-MLATDLAYYLV-RKGMPFRQAHEASGKAVFMAETKGVALNQLSLQELQTISPL 419 Query: 427 ITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNIP 470 + V + S+ + GGT + V Q+ R +Q Sbjct: 420 FSGDVICVWDYRHSVEQYGALGGTARSSVDWQIRQVRALLQAQQ 463 |
>gi|55669953|pdb|1TJU|A Chain A, Crystal Structure Of T161s Duck Delta 2 Crystallin Mutant Length = 474 | Back alignment and structure |
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats. Identities = 194/462 (41%), Positives = 290/462 (62%), Gaps = 2/462 (0%) Query: 11 NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70 +++WGGRFS S IMEK+N SI +D++L E DI GS + L K GI++ E +KI+ Sbjct: 8 DKLWGGRFSGSTDPIMEKLNSSIAYDQRLSEVDIQGSMAYAKALEKAGILTKTELEKILS 67 Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130 GL+ I E G FV + EDIH E RL LIG IAGK+HT RSRNDQV DL+L++ Sbjct: 68 GLEKISEEWSKGVFVVKQSDEDIHTANERRLKELIGDIAGKLHTGRSRNDQVVTDLKLFM 127 Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 K I+ L +L+ L+++A + I+PG++HLQ AQP+ + +++ RD Sbjct: 128 KNSLSIISTHLLQLIKTLVERAAIEIDVILPGYSHLQKAQPIRWSQFLLSHAVALTRDSE 187 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 R + +R++ PLG+ ALAG IDR EL F + NS+D++S+RDF++E LS Sbjct: 188 RLGEVKKRINVLPLGSGALAGNPLDIDREMLRSELEFASISLNSMDAISERDFVVEFLSF 247 Query: 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 + + +H+S++AE++I++ST +F F+ LSDAFSTGSS+MPQK+NPD EL+R+K GR+ G Sbjct: 248 ATLLMIHLSKMAEDLIIYSTSEFGFLTLSDAFSTGSSLMPQKKNPDSLELIRSKAGRVFG 307 Query: 311 ALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT 370 L S+L ++KGLP Y+KD+QEDKE VFD ++TL ++ + +I L ++K+ +++A T Sbjct: 308 RLASILMVLKGLPSTYNKDLQEDKEAVFDVVDTLTAVLQVATGVISTLQISKENMEKALT 367 Query: 371 KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSA 430 ATDLA +LV G+PFR+AH +G V LAE + KL L L+ ISP +S Sbjct: 368 -PEMLATDLALYLV-RKGVPFRQAHTASGKAVHLAETKGITINKLSLEDLKSISPQFSSD 425 Query: 431 VYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNIPKK 472 V + +S+ + GT + V Q+ R ++ ++ Sbjct: 426 VSQVFNFVNSVEQYTALAGTAKSSVTTQIEQLRELMKKQKEQ 467 |
>gi|55669957|pdb|1TJV|A Chain A, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant Length = 474 | Back alignment and structure |
Score = 398 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 194/462 (41%), Positives = 289/462 (62%), Gaps = 2/462 (0%) Query: 11 NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70 +++WGGRFS S IMEK+N SI +D++L E DI GS + L K GI++ E +KI+ Sbjct: 8 DKLWGGRFSGSTDPIMEKLNSSIAYDQRLSEVDIQGSMAYAKALEKAGILTKTELEKILS 67 Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130 GL+ I E G FV + EDIH E RL LIG IAGK+HT RSRNDQV DL+L++ Sbjct: 68 GLEKISEEWSKGVFVVKQSDEDIHTANERRLKELIGDIAGKLHTGRSRNDQVVTDLKLFM 127 Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 K I+ L +L+ L+++A + I+PG+ HLQ AQP+ + +++ RD Sbjct: 128 KNSLSIISTHLLQLIKTLVERAAIEIDVILPGYDHLQKAQPIRWSQFLLSHAVALTRDSE 187 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 R + +R++ PLG+ ALAG IDR EL F + NS+D++S+RDF++E LS Sbjct: 188 RLGEVKKRINVLPLGSGALAGNPLDIDREMLRSELEFASISLNSMDAISERDFVVEFLSF 247 Query: 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 + + +H+S++AE++I++ST +F F+ LSDAFSTGSS+MPQK+NPD EL+R+K GR+ G Sbjct: 248 ATLLMIHLSKMAEDLIIYSTSEFGFLTLSDAFSTGSSLMPQKKNPDSLELIRSKAGRVFG 307 Query: 311 ALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAAT 370 L S+L ++KGLP Y+KD+QEDKE VFD ++TL ++ + +I L ++K+ +++A T Sbjct: 308 RLASILMVLKGLPSTYNKDLQEDKEAVFDVVDTLTAVLQVATGVISTLQISKENMEKALT 367 Query: 371 KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSA 430 ATDLA +LV G+PFR+AH +G V LAE + KL L L+ ISP +S Sbjct: 368 -PEMLATDLALYLV-RKGVPFRQAHTASGKAVHLAETKGITINKLSLEDLKSISPQFSSD 425 Query: 431 VYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNIPKK 472 V + +S+ + GT + V Q+ R ++ ++ Sbjct: 426 VSQVFNFVNSVEQYTALAGTAKSSVTTQIEQLRELMKKQKEQ 467 |
>gi|55670107|pdb|1U15|A Chain A, Crystal Structure Of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) Length = 472 | Back alignment and structure |
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 191/466 (40%), Positives = 290/466 (62%), Gaps = 2/466 (0%) Query: 7 SNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQ 66 ++E +++ GGRF S IMEK+N SI +D++L E DI S + L K GI++ E + Sbjct: 2 ASEGDKLMGGRFVGSTDPIMEKLNSSIAYDQRLSEVDIQASIAYAKALEKAGILTKTELE 61 Query: 67 KIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDL 126 KI+ GL+ I E G FV + EDIH E RL LIG IAGK+HT RSRN+QV DL Sbjct: 62 KILSGLEKISEEWSKGVFVVKQSDEDIHTANERRLKELIGDIAGKLHTGRSRNEQVVTDL 121 Query: 127 RLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFG 186 +L++K I+ L +L+ L+++A + I+PG+THLQ AQP+ + +++ Sbjct: 122 KLFMKNSLSIISTHLLQLIKTLVERAAIEIDVILPGYTHLQKAQPIRWSQFLLSHAVALT 181 Query: 187 RDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILE 246 RD R + +R++ PLG+ ALAG IDR EL F + NS+D++S+RDF++E Sbjct: 182 RDSERLGEVKKRINVLPLGSGALAGNPLDIDREMLRSELEFASISLNSMDAISERDFVVE 241 Query: 247 CLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTG 306 LS + + +H+S++AE++I++ST +F F+ LSDAFSTGSS+MPQK+NPD EL+R+K G Sbjct: 242 FLSVATLLLIHLSKMAEDLIIYSTSEFGFLTLSDAFSTGSSLMPQKKNPDSLELIRSKAG 301 Query: 307 RINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQ 366 R+ G L S+L ++KGLP Y+KD+QEDKE V D ++TL ++ + +I L ++K+ ++ Sbjct: 302 RVFGRLASILMVLKGLPSTYNKDLQEDKEAVIDVVDTLTAVLQVATGVISTLQISKENME 361 Query: 367 EAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPV 426 +A T ATDLA +LV G+PFR+AH +G V LAE + L L L+ ISP+ Sbjct: 362 KALT-PEMLATDLALYLV-RKGMPFRQAHTASGKAVHLAETKGIAINNLTLEDLKSISPL 419 Query: 427 ITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNIPKK 472 +S V + +S+ + GGT + V Q+ R ++ ++ Sbjct: 420 FSSDVSQVFNFVNSVEQYTALGGTAKSSVTTQIEQLRELMKKQKEQ 465 |
>gi|82407488|pdb|1XWO|A Chain A, Crystal Structrue Of Goose Delta Crystallin Length = 465 | Back alignment and structure |
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 185/466 (39%), Positives = 290/466 (62%), Gaps = 2/466 (0%) Query: 7 SNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQ 66 ++E +++ GGRF S IM+ ++ S+ +++L E DI S + L K GI++ E + Sbjct: 1 ASEGDKLMGGRFVGSTDPIMQMLSTSMSTEQRLSEVDIQASIAYAKALEKAGILTKTELE 60 Query: 67 KIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDL 126 KI+ GL+ I E G FV ++ EDIH E RL LIG IAGK++T RSRN+QV DL Sbjct: 61 KILSGLEKISEEWSKGVFVVTQSDEDIHTANERRLKELIGDIAGKLNTGRSRNEQVVTDL 120 Query: 127 RLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFG 186 +L++K I+ L +L+ L+++A + I+PG+THLQ AQP+ + +++ Sbjct: 121 KLFMKNSLSVISTHLLQLIKTLVERAAIEIDVILPGYTHLQKAQPIRWSQFLLSHAVALT 180 Query: 187 RDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILE 246 RD R + R++ PLG+ ALAG IDR EL F + NS+D++S+RDF++E Sbjct: 181 RDSERLGEVKRRINVLPLGSGALAGNPLDIDREMLRSELDFASISLNSMDAISERDFVVE 240 Query: 247 CLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTG 306 LS + + +H+S++AE++I++ST +F F+ LSDAFSTGSS+MPQK+NPD EL+R+K G Sbjct: 241 FLSVATLLMIHLSKMAEDLIIYSTSEFGFLTLSDAFSTGSSLMPQKKNPDSLELIRSKAG 300 Query: 307 RINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQ 366 R+ G L S+L ++KGLP Y+KD+QEDKE VFD ++TL ++ + +I L ++K+ ++ Sbjct: 301 RVFGRLASILMVLKGLPSTYNKDLQEDKEAVFDVVDTLTAVLQVATGVISTLQISKENME 360 Query: 367 EAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPV 426 +A T +TDLA +LV G+PFR+AH +G V LAE + L L L+ ISP+ Sbjct: 361 KALT-PEMLSTDLALYLV-RKGMPFRQAHTASGKAVHLAETKGITINNLTLEDLKSISPL 418 Query: 427 ITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNIPKK 472 +S V + +S+ + GGT + V Q+ + R ++ ++ Sbjct: 419 FSSDVSQVFNFVNSVEQYTAMGGTAKSSVTTQIEHLRELMKKQKEQ 464 |
>gi|14278421|pdb|1HY0|A Chain A, Crystal Structure Of Wild Type Duck Delta 1 Crystallin (Eye Lens Protein) Length = 466 | Back alignment and structure |
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 185/466 (39%), Positives = 289/466 (62%), Gaps = 2/466 (0%) Query: 7 SNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQ 66 ++E +++ GGRF S IM+ ++ SI +++L E DI S + L K GI++ E + Sbjct: 2 ASEGDKLMGGRFVGSTDPIMQMLSTSISTEQRLSEVDIQASIAYAKALEKAGILTKTELE 61 Query: 67 KIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDL 126 KI+ GL+ I E+ G V ++ EDI E RL LIG IAGK+HT RSRN+QV DL Sbjct: 62 KILSGLEKISEELSKGVIVVTQSDEDIQTANERRLKELIGDIAGKLHTGRSRNEQVVTDL 121 Query: 127 RLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFG 186 +L++K I+ L +L+ L+++A + I+PG+THLQ AQP+ + +++ Sbjct: 122 KLFMKNSLSIISTHLLQLIKTLVERAAIEIDVILPGYTHLQKAQPIRWSQFLLSHAVALT 181 Query: 187 RDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILE 246 RD R + +R++ PLG+ ALAG IDR EL F + NS+D++S+RDF++E Sbjct: 182 RDSERLGEVKKRINVLPLGSGALAGNPLDIDREMLRSELEFASISLNSMDAISERDFVVE 241 Query: 247 CLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTG 306 LS + + +H+S++AE++I++ST +F F+ LSDAFSTGSS+MPQK+NPD EL+R+K+G Sbjct: 242 FLSVATLLLIHLSKMAEDLIIYSTSEFGFLTLSDAFSTGSSLMPQKKNPDSLELIRSKSG 301 Query: 307 RINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQ 366 R+ G L S+L ++KGLP Y+KD+QEDKE V D ++TL ++ + +I L ++K+ ++ Sbjct: 302 RVFGRLASILMVLKGLPSTYNKDLQEDKEAVIDVVDTLTAVLQVATGVISTLQISKENME 361 Query: 367 EAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPV 426 +A T ATDLA +LV G+PFR+AH +G V LAE + L L L+ ISP+ Sbjct: 362 KALT-PEMLATDLALYLV-RKGMPFRQAHTASGKAVHLAETKGIAINNLTLEDLKSISPL 419 Query: 427 ITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNIPKK 472 +S V + +S+ + GGT + V Q+ R ++ ++ Sbjct: 420 FSSDVSQVFNFVNSVEQYTALGGTAKSSVTTQIEQLRELMKKQKEQ 465 |
>gi|157872869|pdb|1DCN|A Chain A, Inactive Mutant H162n Of Delta 2 Crystallin With Bound Argininosuccinate Length = 447 | Back alignment and structure |
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 185/449 (41%), Positives = 278/449 (61%), Gaps = 2/449 (0%) Query: 22 PSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVD 81 IMEK+N SI +D++L E DI GS + L K GI++ E +KI+ GL+ I E Sbjct: 1 TDPIMEKLNSSIAYDQRLSEVDIQGSMAYAKALEKAGILTKTELEKILSGLEKISEEWSK 60 Query: 82 GSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDL 141 G FV + EDIH E RL LIG IAGK++T RSRNDQV DL+L++K I+ L Sbjct: 61 GVFVVKQSDEDIHTANERRLKELIGDIAGKLNTGRSRNDQVVTDLKLFMKNSLSIISTHL 120 Query: 142 KKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDE 201 +L+ L+++A + I+PG+T+LQ AQP+ + +++ RD R + +R++ Sbjct: 121 LQLIKTLVERAAIEIDVILPGYTNLQKAQPIRWSQFLLSHAVALTRDSERLGEVKKRINV 180 Query: 202 CPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRL 261 PLG+ ALAG IDR EL F + NS+D++S+RDF++E LS + + +H+S++ Sbjct: 181 LPLGSGALAGNPLDIDREMLRSELEFASISLNSMDAISERDFVVEFLSFATLLMIHLSKM 240 Query: 262 AEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKG 321 AE++I++ST +F F+ LSDAFSTGSS+MPQK+NPD EL+R+K+GR+ G L S+L ++KG Sbjct: 241 AEDLIIYSTSEFGFLTLSDAFSTGSSLMPQKKNPDSLELIRSKSGRVFGRLASILMVLKG 300 Query: 322 LPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTATDLAD 381 LP Y+KD+QEDKE VFD ++TL ++ + +I L ++K+ +++A T ATDLA Sbjct: 301 LPSTYNKDLQEDKEAVFDVVDTLTAVLQVATGVISTLQISKENMEKALT-PEMLATDLAL 359 Query: 382 WLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSI 441 +LV G+PFR+AH +G V LAE + L L L+ ISP +S V + +S+ Sbjct: 360 YLV-RKGVPFRQAHTASGKAVHLAETKGITINNLSLEDLKSISPQFSSDVSQVFNFVNSV 418 Query: 442 SSRKSFGGTCAAEVLKQVTYWRNRIQNIP 470 + GT + V Q+ R ++ Sbjct: 419 EQYTALAGTAKSSVTTQIEQLRELMKKQK 447 |
gi|14278427|pdb|1I0A|A Chain A, Crystal Structure Of Wild Type Turkey Delta 1 Crystallin (Eye Lens Protein) Length = 466 | Back alignment and structure |
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 181/466 (38%), Positives = 278/466 (59%), Gaps = 2/466 (0%) Query: 7 SNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQ 66 + E +++ GGRF S IME ++ SI +++L E DI S + L K I++ E + Sbjct: 2 ATEGDKLLGGRFVGSVDPIMEILSSSISTEQRLTEVDIQASMAYAKALEKASILTKTELE 61 Query: 67 KIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDL 126 KI+ GL+ I E G V ++ EDI IE RL LIG IAGK+ T RSRN+QV DL Sbjct: 62 KILSGLEKISEESSKGVLVMTQSDEDIQTAIERRLKELIGDIAGKLQTGRSRNEQVVTDL 121 Query: 127 RLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFG 186 +L +K I+ L +L+ L+++A + IMPG+THLQ A P+ + +++ Sbjct: 122 KLLLKSSISVISTHLLQLIKTLVERAAIEIDIIMPGYTHLQKALPIRWSQFLLSHAVALT 181 Query: 187 RDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILE 246 RD R + +R+ PLG+ LAG IDR EL T NSID++S+RDF++E Sbjct: 182 RDSERLGEVKKRITVLPLGSGVLAGNPLEIDRELLRSELDMTSITLNSIDAISERDFVVE 241 Query: 247 CLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTG 306 +S + + +H+S+LAE++I++ST +F FV LSDA+STGSS++PQK+NPD EL+R+K G Sbjct: 242 LISVATLLMIHLSKLAEDLIIFSTTEFGFVTLSDAYSTGSSLLPQKKNPDSLELIRSKAG 301 Query: 307 RINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQ 366 R+ G L ++L ++KG+P +SKD+QEDKE V D ++TL ++ + +I L +NK+ ++ Sbjct: 302 RVFGRLAAILMVLKGIPSTFSKDLQEDKEAVLDVVDTLTAVLQVATGVISTLQINKENME 361 Query: 367 EAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPV 426 +A T +TDLA +LV G+P R+A +G V LAE + L L L+ ISP+ Sbjct: 362 KALT-PELLSTDLALYLV-RKGMPIRQAQTASGKAVHLAETKGITINNLTLEDLKSISPL 419 Query: 427 ITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNIPKK 472 S V + V +S+ + GGT + V Q+ R ++ ++ Sbjct: 420 FASDVSQVFSVVNSVEQYTAVGGTAKSSVTAQIEQLRELLKKQKEQ 465 |
gi|290789885|pdb|2X75|A Chain A, Staphylococcus Aureus Adenylosuccinate Lyase Length = 431 | Back alignment and structure |
Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 83/460 (18%), Positives = 161/460 (35%), Gaps = 49/460 (10%) Query: 1 MSKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGII 60 M ++ E++ +W D+ +E + + ++ G I Sbjct: 1 MIERYSREEMSNIW--------------------TDQNRYEAWLEVEILACEAWSELGHI 40 Query: 61 SSEEAQKIIEGLK-------VIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMH 113 + QKI + K I E F+ +++ +G +H Sbjct: 41 PKADVQKIRQNAKVNVERAQEIEQETRHDVVAFT-----------RQVSETLGEERKWVH 89 Query: 114 TARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVT 173 + D V L IK+ I DL++ + +L +KA+ + T+M G TH A+P T Sbjct: 90 YGLTSTDVVDTALSFVIKQANDIIEKDLERFIDVLAEKAKNYKYTLMMGRTHGVHAEPTT 149 Query: 174 FGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREP-TR 232 FG + R++ RF E ++ + A I + T Sbjct: 150 FGVKMALWYTEMQRNLQRFKQVREEIEVGKMSGAVGTF--ANIPPEIESYVCKHLGIGTA 207 Query: 233 NSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFST-GSSIMPQ 291 RD ++ A+ A + + A EI + V + A GSS MP Sbjct: 208 PVSTQTLQRDRHAYYIATLALIATSLEKFAVEIRNLQKTETREVEEAFAKGQKGSSAMPH 267 Query: 292 KRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKE---PVFDALETLQIII 348 KRNP G+E + + I G + T + +PL + +D+ + D L + Sbjct: 268 KRNPIGSENITGISRVIRGY---ITTAYENVPLWHERDISHSSAERIMLPDVTIALDYAL 324 Query: 349 LAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVS-HAGLPFREAHYITGCTVSLAEK 407 + +++ LTV +D ++ K+ L + G+ EA+ ++ + Sbjct: 325 NRFTNIVDRLTVFEDNMRNNIDKTFGLIFSQRVLLALINKGMVREEAYDKVQPKAMISWE 384 Query: 408 NQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSF 447 + +L S + + + + ++ + Sbjct: 385 TKTPFRELIEQDESITSVLTKEELDECFDPKHHLNQVDTI 424 |
gi|13096694|pdb|1F1O|A Chain A, Structural Studies Of Adenylosuccinate Lyases Length = 431 | Back alignment and structure |
Score = 146 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 87/451 (19%), Positives = 163/451 (36%), Gaps = 51/451 (11%) Query: 1 MSKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGII 60 M ++ E++ +W + + E +IL + + G+I Sbjct: 1 MIERYSRPEMSAIW-------TDE--NRF-------QAWLEVEILACEAWA----ELGVI 40 Query: 61 SSEEAQKI-------IEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMH 113 E+ + + I + I + F+ ++ +G +H Sbjct: 41 PKEDVKVMRENASFDINRILEIEKDTRHDVVAFT-----------RAVSESLGEERKWVH 89 Query: 114 TARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVT 173 + D V L +K+ + DL++ + I+ +KA+EH T+M G TH A+P T Sbjct: 90 YGLTSTDVVDTALSYLLKQANDILLKDLERFVDIIKEKAKEHKYTVMMGRTHGVHAEPTT 149 Query: 174 FGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRN 233 FG + E R++ RF + ++ + A ID Sbjct: 150 FGLKLALWHEEMKRNLERFKQAKAGIEVGKISGAVGT--YANIDPFVEQYVCEKLGLKAA 207 Query: 234 SI-DSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFST-GSSIMPQ 291 I RD + ++ A+ A + + A EI + V A GSS MP Sbjct: 208 PISTQTLQRDRHADYMATLALIATSIEKFAVEIRGLQKSETREVEEFFAKGQKGSSAMPH 267 Query: 292 KRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKE---PVFDALETLQIII 348 KRNP G+E + I G ++T + +PL + +D+ + DA L ++ Sbjct: 268 KRNPIGSENMTGMARVIRGY---MMTAYENVPLWHERDISHSSAERIILPDATIALNYML 324 Query: 349 LAISAMIEDLTVNKDRLQEAATK--SHSTATDLADWLVSHAGLPFREAHYITGCTVSLAE 406 S ++++LTV + ++ + + + L+ GL EA+ A Sbjct: 325 NRFSNIVKNLTVFPENMKRNMDRTLGLIYSQRVLLALI-DTGLTREEAYDTVQPKAMEAW 383 Query: 407 KNQCELAKLPLAMLQQISPVITSAVYDILKV 437 + Q +L A + S + + D Sbjct: 384 EKQVPFRELVEAEEKITSRLSPEKIADCFDY 414 |
>gi|146387382|pdb|2PFM|A Chain A, Crystal Structure Of Adenylosuccinate Lyase (Purb) From Bacillus Anthracis Length = 444 | Back alignment and structure |
Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 99/453 (21%), Positives = 166/453 (36%), Gaps = 49/453 (10%) Query: 1 MSKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGII 60 M + E+ +W F K E +IL + + G I Sbjct: 10 MISRYTRPEMGAIW---------------TEENKF-KAWLEVEILACEAWA----ELGDI 49 Query: 61 SSEEAQKI-------IEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMH 113 E+ +KI I+ + I E F+R + + E R +H Sbjct: 50 PKEDVKKIREHASFDIDRIYEIEKETRHDVVAFTRAVSETPALGEER---------KWVH 100 Query: 114 TARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVT 173 + D V L +K+ I DL+ ++IL +KA+EH TIM G TH A+P T Sbjct: 101 YGLTSTDVVDTALSYILKQANEIILKDLENFVSILANKAKEHKYTIMMGRTHGVHAEPTT 160 Query: 174 FGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRN 233 FG + E R++ RF + + L A ID Sbjct: 161 FGLKLGLWYEEMKRNVERFKQAANTVRVGKLSGAVGT--YANIDPFVEKYVCENLGLEAA 218 Query: 234 SI-DSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFST-GSSIMPQ 291 I RD +S A+ A + ++A EI + V + A GSS MP Sbjct: 219 PISTQTLQRDRHAHYMSTLALIATSIEKMAVEIRGLQKSETREVEEAFAKGQKGSSAMPH 278 Query: 292 KRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKE---PVFDALETLQIII 348 KRNP G+E + I G ++T + +PL + +D+ + DA L ++ Sbjct: 279 KRNPIGSENMTGLARVIRGY---MMTAYENVPLWHERDISHSSAERVILPDATIALNYML 335 Query: 349 LAISAMIEDLTVNKDRLQEAATK--SHSTATDLADWLVSHAGLPFREAHYITGCTVSLAE 406 ++++LTV + ++ T+ + + L+ G+ EA+ I A Sbjct: 336 NRFGNIVKNLTVYPENMKRNMTRTYGLIYSQRVMLTLI-DKGMVREEAYDIVQPKAMEAW 394 Query: 407 KNQCELAKLPLAMLQQISPVITSAVYDILKVES 439 + Q + +L A + S + + + E Sbjct: 395 ETQVQFKELVEADERITSKLTQEEINECFNYEH 427 |
>gi|34810579|pdb|1Q5N|A Chain A, Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate Cycloisomerase (Cmle) From Acinetobacter Calcoaceticus Sp. Adp1 Length = 454 | Back alignment and structure |
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 81/441 (18%), Positives = 153/441 (34%), Gaps = 18/441 (4%) Query: 36 DKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDL-EDIH 94 D+ L + A+ G+I A I K +I + + L +I Sbjct: 23 DRALVSYMVEAEVALAQAQAQVGVIPQSAATVIQRAAKTAIDKIDFDALATATGLAGNIA 82 Query: 95 MNIEARLTSL----IGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLD 150 + +LT++ A +H + D + L ++ + N +++ L Sbjct: 83 IPFVKQLTAIVKDADEDAARYVHWGATSQDILDTACILQCRDALAIVQNQVQQCYETALS 142 Query: 151 KAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALA 210 +A+ + + +M G T LQ A P+T GH + F RD+ R R+ LG A + Sbjct: 143 QAQTYRHQVMMGRTWLQQALPITLGHKLARWASAFKRDLDRINAIKARVLVAQLGGAVGS 202 Query: 211 GTSF-PIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWS 269 S + + + +RD I+E S I ++ ++A + L Sbjct: 203 LASLQDQGSIVVEAYAKQLKLGQTACTWHGERDRIVEIASVLGIITGNVGKMARDWSLMM 262 Query: 270 TPQFNFV-RLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSK 328 + V + GSS MP KRNP A V A R+ + S+ M Sbjct: 263 QTEIAEVFEPTAKGRGGSSTMPHKRNPVAAASVLAAANRVPALMSSIYQSMVQEHERSLG 322 Query: 329 DMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEA--ATKSHSTATDLADWLVSH 386 + + + + + +++ + VN + + + T A + L H Sbjct: 323 AWHAEWLSLPEIFQLTAGALERTLDVLKGMEVNAENMHQNIECTHGLIMAEAVMMALAPH 382 Query: 387 AGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKS 446 G AH++ A Q L + + + S + +I K ES + Sbjct: 383 MG--RLNAHHVVEAACKTAVAEQKHLKDIISQVDEVKQYFNPSQLDEIFKPESYL----- 435 Query: 447 FGGTCAAEVLKQVTYWRNRIQ 467 G ++ + + + Sbjct: 436 --GNIQDQIDAVLQEAKGEAK 454 |
>gi|30749354|pdb|1J3U|A Chain A, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1 Length = 468 | Back alignment and structure |
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 75/438 (17%), Positives = 155/438 (35%), Gaps = 47/438 (10%) Query: 37 KKLFEQDIL----GSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLED 92 ++ + I K + G++ E Q I++ + + F+ Sbjct: 39 YRIHPELIKSLGIVKKSAALANMEVGLLDKEVGQYIVKAADEVIEGKWNDQFIVDPIQGG 98 Query: 93 ----IHMN----IEARLTSLIGSIAGK---------MHTARSRNDQVALDLRLWIKEKTL 135 I+MN I R L+G G ++ ++S ND + + Sbjct: 99 AGTSINMNANEVIANRALELMGEEKGNYSKISPNSHVNMSQSTNDAFPTATHIAVLSLLN 158 Query: 136 EITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDS 195 ++ K + + KA+E I G THLQ A P+ G AY + RDI R ++ Sbjct: 159 QLIETTKYMQQEFMKKADEFAGVIKMGRTHLQDAVPILLGQEFEAYARVIARDIERIANT 218 Query: 196 IERLDECPLGAAALAGTSFPIDRHFT--------AKELGFREPTRNSIDSVSDRDFILEC 247 L + +GA A+ D + ++ +D+ + D E Sbjct: 219 RNNLYDINMGATAVGT-GLNADPEYISIVTEHLAKFSGHPLRSAQHLVDATQNTDCYTEV 277 Query: 248 LSHSAICAMHMSRLAEEIILWSTPQFNFVRLS--DAFSTGSSIMPQKRNPDGAELVRAKT 305 S +C ++MS++A ++ L ++ + A GSSIMP K NP E++ Sbjct: 278 SSALKVCMINMSKIANDLRLMASGPRAGLSEIVLPARQPGSSIMPGKVNPVMPEVMNQVA 337 Query: 306 GRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISA-MIEDLTVNKDR 364 ++ G L++ + + + + ++ + + + + ++ + N++R Sbjct: 338 FQVFGNDLTITSASEAGQFELNVMEPVLFFNLIQSISIMTNVFKSFTENCLKGIKANEER 397 Query: 365 LQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQIS 424 ++E KS T + + + A + +L + + Sbjct: 398 MKEYVEKSIGIITAINPHV----------GYETAAKLAREAYLTGESIRELCI----KYG 443 Query: 425 PVITSAVYDILKVESSIS 442 + + +IL I Sbjct: 444 VLTEEQLNEILNPYEMIH 461 |
>gi|23200276|pdb|1KQ7|A Chain A, E315q Mutant Form Of Fumarase C From E.Coli Length = 467 | Back alignment and structure |
Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats. Identities = 70/468 (14%), Positives = 151/468 (32%), Gaps = 51/468 (10%) Query: 10 VNQMWGGRFSSSPSWIMEKINVSID-FDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKI 68 +++WG + +E +S + L L + + G++S E+A I Sbjct: 18 ADKLWG----AQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAI 73 Query: 69 IEGLKVIRAEIVDGSFV---FSRDLED-IHMNIEARLTSLIGS-------IAGKMHTAR- 116 + + A D F + +MN+ L + + K+H Sbjct: 74 RQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDD 133 Query: 117 -----SRNDQVALDLRLWIKEKTL-EITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQ 170 S ND + + ++ LK L L +K+ + + G THLQ A Sbjct: 134 VNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSRAFADIVKIGRTHLQDAT 193 Query: 171 PVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREP 230 P+T G +V M ++ S+ + E LG A+ + + Sbjct: 194 PLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGT-GLNTHPEYARRVADELAV 252 Query: 231 T--------RNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLS 279 N ++++ D +++ A + ++A ++ ++ + + Sbjct: 253 ITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIP 312 Query: 280 DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFD 339 + GSSIMP K NP E + ++ G +++ + Sbjct: 313 E-NQPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQ 371 Query: 340 ALETLQIIILAISAMI-EDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYIT 398 ++ L + + + + N++R+ + +S T L + + Sbjct: 372 SVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHI----------GYDKA 421 Query: 399 GCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKS 446 A K A + + + ++ E + S K+ Sbjct: 422 AEIAKKAHKEGLT----LKAAALALGYLSEAEFDSWVRPEQMVGSMKA 465 |
gi|1942160|pdb|1FUO|A Chain A, Fumarase C With Bound Citrate Length = 467 | Back alignment and structure |
Score = 133 bits (334), Expect = 7e-29, Method: Composition-based stats. Identities = 70/468 (14%), Positives = 151/468 (32%), Gaps = 51/468 (10%) Query: 10 VNQMWGGRFSSSPSWIMEKINVSID-FDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKI 68 +++WG + +E +S + L L + + G++S E+A I Sbjct: 18 ADKLWG----AQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAI 73 Query: 69 IEGLKVIRAEIVDGSFV---FSRDLED-IHMNIEARLTSLIGS-------IAGKMHTAR- 116 + + A D F + +MN+ L + + K+H Sbjct: 74 RQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDD 133 Query: 117 -----SRNDQVALDLRLWIKEKTL-EITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQ 170 S ND + + ++ LK L L +K+ + + G THLQ A Sbjct: 134 VNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSRAFADIVKIGRTHLQDAT 193 Query: 171 PVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREP 230 P+T G +V M ++ S+ + E LG A+ + + Sbjct: 194 PLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGT-GLNTHPEYARRVADELAV 252 Query: 231 T--------RNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLS 279 N ++++ D +++ A + ++A ++ ++ + + Sbjct: 253 ITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIP 312 Query: 280 DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFD 339 + GSSIMP K NP E + ++ G +++ + Sbjct: 313 E-NEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQ 371 Query: 340 ALETLQIIILAISAMI-EDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYIT 398 ++ L + + + + N++R+ + +S T L + + Sbjct: 372 SVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHI----------GYDKA 421 Query: 399 GCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKS 446 A K A + + + ++ E + S K+ Sbjct: 422 AEIAKKAHKEGLT----LKAAALALGYLSEAEFDSWVRPEQMVGSMKA 465 |
>gi|2392682|pdb|2FUS|A Chain A, Mutations Of Fumarase That Distinguish Between The Active Site And A Nearby Dicarboxylic Acid Binding Site Length = 467 | Back alignment and structure |
Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 69/468 (14%), Positives = 153/468 (32%), Gaps = 51/468 (10%) Query: 10 VNQMWGGRFSSSPSWIMEKINVSID-FDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKI 68 +++WG + +E +S + L L + + G++S E+A I Sbjct: 18 ADKLWG----AQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAI 73 Query: 69 IEGLKVIRAEIVDGSFV---FSRDLED-IHMNIEARLTSLIGSIAG-------------K 111 + + A D F + +MN+ L + + G Sbjct: 74 RQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVNPNDD 133 Query: 112 MHTARSRNDQVALDLRLWIKEKTL-EITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQ 170 ++ ++S ND + + ++ LK L L +K+ + + G THLQ A Sbjct: 134 VNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSRAFADIVKIGRTHLQDAT 193 Query: 171 PVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREP 230 P+T G +V M ++ S+ + E LG A+ + + Sbjct: 194 PLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGT-GLNTHPEYARRVADELAV 252 Query: 231 T--------RNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLS 279 N ++++ D +++ A + ++A ++ ++ + + Sbjct: 253 ITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIP 312 Query: 280 DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFD 339 + GSSIMP K NP E + ++ G +++ + Sbjct: 313 E-NEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQ 371 Query: 340 ALETLQIIILAISAMI-EDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYIT 398 ++ L + + + + N++R+ + +S T L + + Sbjct: 372 SVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHI----------GYDKA 421 Query: 399 GCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKS 446 A K A + + + ++ E + S K+ Sbjct: 422 AEIAKKAHKEGLT----LKAAALALGYLSEAEFDSWVRPEQMVGSMKA 465 |
>gi|1942162|pdb|1FUP|A Chain A, Fumarase With Bound Pyromellitic Acid Length = 472 | Back alignment and structure |
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 70/468 (14%), Positives = 151/468 (32%), Gaps = 51/468 (10%) Query: 10 VNQMWGGRFSSSPSWIMEKINVSID-FDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKI 68 +++WG + +E +S + L L + + G++S E+A I Sbjct: 18 ADKLWG----AQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAI 73 Query: 69 IEGLKVIRAEIVDGSFV---FSRDLED-IHMNIEARLTSLIGS-------IAGKMHTAR- 116 + + A D F + +MN+ L + + K+H Sbjct: 74 RQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDD 133 Query: 117 -----SRNDQVALDLRLWIKEKTL-EITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQ 170 S ND + + ++ LK L L +K+ + + G THLQ A Sbjct: 134 VNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSRAFADIVKIGRTHLQDAT 193 Query: 171 PVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREP 230 P+T G +V M ++ S+ + E LG A+ + + Sbjct: 194 PLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGT-GLNTHPEYARRVADELAV 252 Query: 231 T--------RNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLS 279 N ++++ D +++ A + ++A ++ ++ + + Sbjct: 253 ITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIP 312 Query: 280 DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFD 339 + GSSIMP K NP E + ++ G +++ + Sbjct: 313 E-NEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQ 371 Query: 340 ALETLQIIILAISAMI-EDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYIT 398 ++ L + + + + N++R+ + +S T L + + Sbjct: 372 SVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHI----------GYDKA 421 Query: 399 GCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKS 446 A K A + + + ++ E + S K+ Sbjct: 422 AEIAKKAHKEGLT----LKAAALALGYLSEAEFDSWVRPEQMVGSMKA 465 |
>gi|2392342|pdb|1FUR|A Chain A, Fumarase Mutant H188n With Bound Substrate L-Malate At Putative Activator Site Length = 467 | Back alignment and structure |
Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 69/468 (14%), Positives = 151/468 (32%), Gaps = 51/468 (10%) Query: 10 VNQMWGGRFSSSPSWIMEKINVSID-FDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKI 68 +++WG + +E +S + L L + + G++S E+A I Sbjct: 18 ADKLWG----AQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAI 73 Query: 69 IEGLKVIRAEIVDGSFV---FSRDLED-IHMNIEARLTSLIGS-------IAGKMHTAR- 116 + + A D F + +MN+ L + + K+H Sbjct: 74 RQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDD 133 Query: 117 -----SRNDQVALDLRLWIKEKTL-EITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQ 170 S ND + + ++ LK L L +K+ + + G T+LQ A Sbjct: 134 VNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSRAFADIVKIGRTNLQDAT 193 Query: 171 PVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREP 230 P+T G +V M ++ S+ + E LG A+ + + Sbjct: 194 PLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGT-GLNTHPEYARRVADELAV 252 Query: 231 T--------RNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLS 279 N ++++ D +++ A + ++A ++ ++ + + Sbjct: 253 ITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIP 312 Query: 280 DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFD 339 + GSSIMP K NP E + ++ G +++ + Sbjct: 313 E-NEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQ 371 Query: 340 ALETLQIIILAISAMI-EDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYIT 398 ++ L + + + + N++R+ + +S T L + + Sbjct: 372 SVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHI----------GYDKA 421 Query: 399 GCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKS 446 A K A + + + ++ E + S K+ Sbjct: 422 AEIAKKAHKEGLT----LKAAALALGYLSEAEFDSWVRPEQMVGSMKA 465 |
gi|7245290|pdb|1C3U|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 431 | Back alignment and structure |
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 80/452 (17%), Positives = 164/452 (36%), Gaps = 33/452 (7%) Query: 1 MSKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGII 60 M ++ + + +W + + L T + G+I Sbjct: 1 MVERYSLSPMKDLW---------------TEEAKYRRWL-----EVELAVTRAYEELGMI 40 Query: 61 SSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRND 120 ++I K+ ++ + + D+ +E + S+IG + H + +D Sbjct: 41 PKGVTERIRNNAKI---DVELFKKIEEKTNHDVVAFVE-GIGSMIGEDSRFFHYGLTSSD 96 Query: 121 QVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMA 180 + L + E + LK+ +L + A + +T G TH A+P +FG + Sbjct: 97 VLDTANSLALVEAGKILLESLKEFCDVLWEVANRYKHTPTIGRTHGVHAEPTSFGLKVLG 156 Query: 181 YVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSD 240 + R++ R +IE + + A + P + A +P S V Sbjct: 157 WYSEMKRNVQRLERAIEEVSYGKISGAVGNYANVPPEVEEKALSYLGLKPEPVS-TQVVP 215 Query: 241 RDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAF-STGSSIMPQKRNPDGAE 299 RD LS AI A + R+A EI + V GSS MP K+NP E Sbjct: 216 RDRHAFYLSTLAIVAAGIERIAVEIRHLQRTEVLEVEEPFRKGQRGSSAMPHKKNPITCE 275 Query: 300 LVRAKTGRINGALLSLLTIMKGLPLAYSKDMQED--KEPVF-DALETLQIIILAISAMIE 356 + + + + ++ + L + +D+ + VF DA +TL +I+ + ++ Sbjct: 276 RLTGLSRMMRAY---VDPSLENIALWHERDISHSSVERYVFPDATQTLYYMIVTATNVVR 332 Query: 357 DLTVNKDRLQEAATKSHSTATDLADWL-VSHAGLPFREAHYITGCTVSLAEKNQCELAKL 415 ++ VN++R+++ + L + GL +EA+ I ++ + Sbjct: 333 NMKVNEERMKKNIDLTKGLVFSQRVLLKLIEKGLTRKEAYDIVQRNALKTWNSEKHFLEY 392 Query: 416 PLAMLQQISPVITSAVYDILKVESSISSRKSF 447 L + V + ++ + + Sbjct: 393 LLEDEEVKKLVTKEELEELFDISYYLKHVDHI 424 |
>gi|48425891|pdb|1VDK|A Chain A, Crystal Structure Of Fumarase From Thermus Thermophilus Hb8 Length = 466 | Back alignment and structure |
Score = 126 bits (316), Expect = 8e-27, Method: Composition-based stats. Identities = 70/476 (14%), Positives = 155/476 (32%), Gaps = 59/476 (12%) Query: 1 MSKKIKSNEV-------NQMWGGRFSSSPSWIMEKINVSIDFDK-KLFEQDILG----SK 48 M +I+ + + ++ WG + +E I D+ ++ + I K Sbjct: 1 MEYRIERDTMGEVRVPADKYWG----AQTQRSLENF--RIGTDRFRMPLEIIRAYGMLKK 54 Query: 49 VHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVF--------SRDLEDIHMNIEAR 100 + G + E A+ II+ + + D F ++ +++ I R Sbjct: 55 AAARANLELGELPEEIAKAIIQAAEEVVQGKWDDHFPLVVFQTGSGTQTNMNVNEVIANR 114 Query: 101 --------LTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKL-LTILLDK 151 L S ++ +S ND + + + + + + K Sbjct: 115 ASEILGKPLGSKYAHPNDHVNRGQSSNDTFPTAMYVAVALALHQRLYPAVEGLIRTFTAK 174 Query: 152 AEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAG 211 A+ + G THL A P+T G ++ ++ + + L +G A+ Sbjct: 175 AQAFDQIVKVGRTHLMDAVPITLGQEIGSWAAQLKTTLAAVKEMEKGLYNLAIGGTAVGT 234 Query: 212 TSFPIDR------HFTAKELG-FREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEE 264 R + A+E G N +++ D ++ + A + ++ + Sbjct: 235 GLNAHPRFGELVAKYLAEETGLPFRVAENRFAALAAHDELVNVMGAIRTLAGALMKIGND 294 Query: 265 IILWSTPQFNFVR--LSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGL 322 + ++ + + A GSSIMP K NP E + R+ G ++ Sbjct: 295 VRWLASGPYAGIGEITIPANEPGSSIMPGKVNPTQVEALTMVVVRVYGNDHTVAFAGSQG 354 Query: 323 PLAYSKDMQEDKEPVFDALETLQIIILAI-SAMIEDLTVNKDRLQEAATKSHSTATDLAD 381 + +++ L + + + + + + N +R++E K+ AT L Sbjct: 355 NFQLNVYKPVMAYSTLESINLLADAVASFDAHLAQGIEPNLERIEEYLQKNPMLATALNK 414 Query: 382 WLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKV 437 + + V A K + L + L + + I+ Sbjct: 415 AI----------GYDKAAEIVKKALKEKKTLKQAALE----LGYLTEEEFDRIVVP 456 |
>gi|7245816|pdb|1C3C|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 429 | Back alignment and structure |
Score = 126 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 80/431 (18%), Positives = 164/431 (38%), Gaps = 17/431 (3%) Query: 26 MEKINVSIDFDKK----LFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVD 81 +E+ ++S D + + + T + G+I ++I K+ ++ Sbjct: 1 VERYSLSPMKDLWTEEAKYRRWLEVELAVTRAYEELGMIPKGVTERIRNNAKI---DVEL 57 Query: 82 GSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDL 141 + + D+ +E + S+IG + H + +D + L + E + L Sbjct: 58 FKKIEEKTNHDVVAFVE-GIGSMIGEDSRFFHYGLTSSDVLDTANSLALVEAGKILLESL 116 Query: 142 KKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDE 201 K+ +L + A + +T G TH A+P +FG + + R++ R +IE + Sbjct: 117 KEFCDVLWEVANRYKHTPTIGRTHGVHAEPTSFGLKVLGWYSEMKRNVQRLERAIEEVSY 176 Query: 202 CPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRL 261 + A + P + A +P S V RD LS AI A + R+ Sbjct: 177 GKISGAVGNYANVPPEVEEKALSYLGLKPEPVS-TQVVPRDRHAFYLSTLAIVAAGIERI 235 Query: 262 AEEIILWSTPQFNFVRLSDAF-STGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMK 320 A EI + V GSS MP K+NP E + + + + ++ Sbjct: 236 AVEIRHLQRTEVLEVEEPFRKGQRGSSAMPHKKNPITCERLTGLSRMMRAY---VDPSLE 292 Query: 321 GLPLAYSKDMQED--KEPVF-DALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTAT 377 + L + +D+ + VF DA +TL +I+ + ++ ++ VN++R+++ + Sbjct: 293 NIALWHERDISHSSVERYVFPDATQTLYYMIVTATNVVRNMKVNEERMKKNIDLTKGLVF 352 Query: 378 DLADWL-VSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILK 436 L + GL +EA+ I ++ + L + V + ++ Sbjct: 353 SQRVLLKLIEKGLTRKEAYDIVQRNALKTWNSEKHFLEYLLEDEEVKKLVTKEELEELFD 412 Query: 437 VESSISSRKSF 447 + + Sbjct: 413 ISYYLKHVDHI 423 |
>gi|303325218|pdb|3OCF|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From Brucella Melitensis In Native Form Length = 478 | Back alignment and structure |
Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 81/472 (17%), Positives = 152/472 (32%), Gaps = 55/472 (11%) Query: 4 KIKSNEVNQMWGGR-------FSSSPSWIMEKINVS---IDFDKKLFEQDILGSKVHTTM 53 + E + + G R F +E ++S ++ L + K T Sbjct: 21 SMTRREQDSL-GERDIPMDAYFGIQTLRAVENFSLSDVALNHIPALVRALAMVKKAAATA 79 Query: 54 LAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHM-----NIE----ARLTSL 104 K + + I+ I ++ FV E L L Sbjct: 80 NYKLRQLPEPKYAAIVAACDDIIDGLLMEQFVVDVFQGGAGTSSNMNANEVIANRALEHL 139 Query: 105 IGSIAGK--------MHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHH 156 ++ ++S ND +RL + ++ L +L+ K E Sbjct: 140 GRPRGDYQTIHPNDDVNMSQSTNDVYPTAVRLALLLSQNQVQTALHRLIAAFEAKGREFA 199 Query: 157 NTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAG----- 211 I G T LQ A P+T G A+ D +R + E LG A+ Sbjct: 200 TVIKIGRTQLQDAVPITLGQEFEAFAATLREDTARLEEVAALFREVNLGGTAIGTRINAS 259 Query: 212 --TSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWS 269 + + + T N +++ D + A+ +S++A ++ L S Sbjct: 260 HAYAEQAIVELSQISGIELKATGNLVEASWDTGAFVTFSGILRRIAVKLSKIANDLRLLS 319 Query: 270 TPQFNFVRLS--DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYS 327 + + + A GSSIMP K NP E V ++ G L++ + L + Sbjct: 320 SGPRSGLGEIRLPAVQPGSSIMPGKVNPVIPESVNQVCYQVIGNDLTVTMAAESGQLQLN 379 Query: 328 KDMQEDKEPVFDALETLQIIILAISA-MIEDLTVNKDRLQEAATKSHSTATDLADWLVSH 386 + ++ L + ++ ++ + N +R + A +S S AT LV Sbjct: 380 AFEPLIVYNILSSMRLLGRAMTNLAERCVDGIEANVERCRAGAEESISLATA----LVPV 435 Query: 387 AGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDI-LKV 437 G + A + + ++ IS + ++ I L Sbjct: 436 VG------YARAAEIAKQALASGQTVMEV------AISKGLDASALTIMLDP 475 |
>gi|303325214|pdb|3OCE|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From Brucella Melitensis Bound To Cobalt Length = 474 | Back alignment and structure |
Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 81/472 (17%), Positives = 152/472 (32%), Gaps = 55/472 (11%) Query: 4 KIKSNEVNQMWGGR-------FSSSPSWIMEKINVS---IDFDKKLFEQDILGSKVHTTM 53 + E + + G R F +E ++S ++ L + K T Sbjct: 4 SMTRREQDSL-GERDIPMDAYFGIQTLRAVENFSLSDVALNHIPALVRALAMVKKAAATA 62 Query: 54 LAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHM-----NIE----ARLTSL 104 K + + I+ I ++ FV E L L Sbjct: 63 NYKLRQLPEPKYAAIVAACDDIIDGLLMEQFVVDVFQGGAGTSSNMNANEVIANRALEHL 122 Query: 105 IGSIAGK--------MHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHH 156 ++ ++S ND +RL + ++ L +L+ K E Sbjct: 123 GRPRGDYQTIHPNDDVNMSQSTNDVYPTAVRLALLLSQNQVQTALHRLIAAFEAKGREFA 182 Query: 157 NTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAG----- 211 I G T LQ A P+T G A+ D +R + E LG A+ Sbjct: 183 TVIKIGRTQLQDAVPITLGQEFEAFAATLREDTARLEEVAALFREVNLGGTAIGTRINAS 242 Query: 212 --TSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWS 269 + + + T N +++ D + A+ +S++A ++ L S Sbjct: 243 HAYAEQAIVELSQISGIELKATGNLVEASWDTGAFVTFSGILRRIAVKLSKIANDLRLLS 302 Query: 270 TPQFNFVRLS--DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYS 327 + + + A GSSIMP K NP E V ++ G L++ + L + Sbjct: 303 SGPRSGLGEIRLPAVQPGSSIMPGKVNPVIPESVNQVCYQVIGNDLTVTMAAESGQLQLN 362 Query: 328 KDMQEDKEPVFDALETLQIIILAISA-MIEDLTVNKDRLQEAATKSHSTATDLADWLVSH 386 + ++ L + ++ ++ + N +R + A +S S AT LV Sbjct: 363 AFEPLIVYNILSSMRLLGRAMTNLAERCVDGIEANVERCRAGAEESISLATA----LVPV 418 Query: 387 AGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDI-LKV 437 G + A + + ++ IS + ++ I L Sbjct: 419 VG------YARAAEIAKQALASGQTVMEV------AISKGLDASALTIMLDP 458 |
>gi|300508783|pdb|3NO9|A Chain A, Crystal Structure Of Apo Fumarate Hydratase From Mycobacterium Tuberculosis Length = 475 | Back alignment and structure |
Score = 97.6 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 79/453 (17%), Positives = 143/453 (31%), Gaps = 41/453 (9%) Query: 10 VNQMWGGRFSSSPSWIMEKINVS---IDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQ 66 +W + +E +S ++ + + G + + G+++ E+A Sbjct: 25 AKALW----RAQTQRAVENFPISGRGLERTQIRALGLLKG--ACAQVNSDLGLLAPEKAD 78 Query: 67 KIIEGLKVIRAEIVDGSFVFSR----DLEDIHMNIEARLTSLIGSIAGKMH------TAR 116 II I D F +MN + S+ +H ++ Sbjct: 79 AIIAAAAEIADGQHDDQFPIDVFQTGSGTSSNMNTNEVIASIAAKGGVTLHPNDDVNMSQ 138 Query: 117 SRNDQVALDLRLWIKEKTLEITNDL-KKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFG 175 S ND + E + ++L L KA + H + G THL A PVT G Sbjct: 139 SSNDTFPTATHIAATEAAVAHLIPALQQLHDALAAKALDWHTVVKSGRTHLMDAVPVTLG 198 Query: 176 HHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPT---- 231 Y I R + RL E +G A+ D T Sbjct: 199 QEFSGYARQIEAGIERVRACLPRLGELAIGGTAVGTGLNAPDDFGVRVVAVLVAQTGLSE 258 Query: 232 ----RNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSD--AFSTG 285 NS ++ + RD ++E A+ ++++A +I + + G Sbjct: 259 LRTAANSFEAQAARDGLVEASGALRTIAVSLTKIANDIRWMGSGPLTGLAEIQLPDLQPG 318 Query: 286 SSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQ 345 SSIMP K NP E V ++ G ++ + + + ++ + L Sbjct: 319 SSIMPGKVNPVLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLT 378 Query: 346 IIILAIS-AMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSL 404 + + I LT N + L+ A S S T L + + Sbjct: 379 NVSRLFAQRCIAGLTANVEHLRRLAESSPSIVTPLNSAI----------GYEEAAAVAKQ 428 Query: 405 AEKNQCELAKLPLAMLQQISPVITSAVYDILKV 437 A K + + + + + + L V Sbjct: 429 ALKERKTIRQTVIDRGLIGDRLSIEDLDRRLDV 461 |
>gi|320089966|pdb|3QBP|A Chain A, Crystal Structure Of Fumarase Fum From Mycobacterium Marinum Length = 478 | Back alignment and structure |
Score = 94.1 bits (232), Expect = 5e-17, Method: Composition-based stats. Identities = 83/453 (18%), Positives = 148/453 (32%), Gaps = 41/453 (9%) Query: 10 VNQMWGGRFSSSPSWIMEKINVS---IDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQ 66 +W + +E +S ++ + + G + G+++ E+A+ Sbjct: 33 AKALW----RAQTQRAVENFPISGRGLERAQIRALGLLKG--ACAQVNMDLGLLAPEKAE 86 Query: 67 KIIEGLKVIRAEIVDGSFVFSR----DLEDIHMNIEARLTSLIGSIAGKMH------TAR 116 II I D F +MN + S+ G+ +H ++ Sbjct: 87 AIIAAAAEIADGQHDDQFPIDVFQTGSGTSSNMNTNEVIASIAGANGVAVHPNDDVNMSQ 146 Query: 117 SRNDQVALDLRLWIKE-KTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFG 175 S ND + E + L+ L L KA E + + G THL A PVT G Sbjct: 147 SSNDTFPTATHIAATEAAVSHLIPALEILQDALATKALEWQSVVKSGRTHLMDAVPVTLG 206 Query: 176 HHCMAYVEMFGRDISRFFDSIERLDECPLGAAAL-----AGTSFPIDRHFT---AKELGF 227 Y I R ++ RL E +G A+ A F + L Sbjct: 207 QEFSGYARQIEAGIERVRATLPRLGELAIGGTAVGTGLNAPEGFGVKVVSVLVSQTGLPQ 266 Query: 228 REPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSD--AFSTG 285 NS ++ + RD ++E A+ ++++A +I + + G Sbjct: 267 LRTAANSFEAQAARDGLVEASGALRTIAVSLTKIANDIRWMGSGPLTGLAEIQLPDLQPG 326 Query: 286 SSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQ 345 SSIMP K NP E V ++ G ++ + + + ++ L Sbjct: 327 SSIMPGKVNPVLPEAVTQVAAQVIGNDAAVAWGGANGAFELNVYIPMMARNILESFTLLT 386 Query: 346 IIILAIS-AMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSL 404 + + I LT N + L+E A S S T L + + Sbjct: 387 NVSKLFAQRCIAGLTANAEHLRELAESSPSIVTPLNSAI----------GYEEAAAVAKQ 436 Query: 405 AEKNQCELAKLPLAMLQQISPVITSAVYDILKV 437 A K + + + + + + L V Sbjct: 437 ALKERKTIRQTVIDRGLIGDKLSLEELDRRLDV 469 |
>gi|332639961|pdb|3RRP|A Chain A, Crystal Structure Of Fumarate Hydratase Fum From Mycobacterium Abscessus With Malate Bound Length = 471 | Back alignment and structure |
Score = 76.0 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 80/464 (17%), Positives = 149/464 (32%), Gaps = 45/464 (9%) Query: 10 VNQMWGGRFSSSPSWIMEKINVS---IDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQ 66 +W + +E +S ++ + + G + G++++E+A Sbjct: 25 AEALW----RAQTQRAVENFPISGRGLERTQIRALGLLKG--ACAQVNKDLGLLAAEKAD 78 Query: 67 KIIEGLKVIRAEIVDGSFVFSR------------DLEDIHMNIEARLTSLIGSIAGKMHT 114 II + I D F E I ++ ++ Sbjct: 79 AIIAAAQEIADGKHDDQFPIDVFQTGSGTSSNMNANEVIASIAAQATPPVVVHPNDDVNM 138 Query: 115 ARSRNDQVALDLRLWIKE-KTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVT 173 ++S ND L E ++ L+ L L KA+ + G THL A PVT Sbjct: 139 SQSSNDTFPTATHLAATEAAVRDLIPALEYLQQALATKAKAWKTVVKSGRTHLMDAVPVT 198 Query: 174 FGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPID------RHFTAKELGF 227 G Y I R ++ RL E P+G A+ D + G Sbjct: 199 LGQEFGGYARQIEAGIERVKATLPRLGELPIGGTAVGTGLNAPDGFGAKVVEVLKQSTGL 258 Query: 228 REP--TRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLSDAF 282 E +S ++ + RD ++E A ++++A +I + ++L D Sbjct: 259 SELKTASDSFEAQAARDGLVEGSGALKTIAASLTKIANDIRWMGSGPLTGLGEIQLPD-L 317 Query: 283 STGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALE 342 GSSIMP K NP E V ++ G ++ + + + ++ Sbjct: 318 QPGSSIMPGKVNPVLPEAVTQVAAQVIGNDAAITVGGLSGAFELNVYIPVMARNLLESFT 377 Query: 343 TLQIIILAI-SAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCT 401 L + ++ L N+D L+ A S S T L + + Sbjct: 378 LLANVSRLFVDKCVDGLVANEDHLRTLAESSPSIVTPLNSAI----------GYEEAAAV 427 Query: 402 VSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRK 445 A K + + + + + + L V + + Sbjct: 428 AKEALKERKTIRQTVIDRGLIGDKLSIEELDKRLDVLAMAKVKD 471 |
>gi|169791879|pdb|3C8T|A Chain A, Crystal Structure Of Fumarate Lyase From Mesorhizobium Sp. Bnc1 Length = 451 | Back alignment and structure |
Score = 139 bits (350), Expect = 9e-31, Method: Composition-based stats. Identities = 90/425 (21%), Positives = 152/425 (35%), Gaps = 24/425 (5%) Query: 44 ILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTS 103 + A+ GII + A I + E+ I +E L++ Sbjct: 31 VETEVALARAQARLGIIPEDAAAGITAAARTFAPEMERLRDDTEIVGYPILPLVEQ-LSA 89 Query: 104 LIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGF 163 G +H + D + L I++ I+ ++ + L A H +T M G Sbjct: 90 HAGEAGKYLHWGATTQDIMDTATVLQIRDGLALISRRIESVRKALAALARNHRDTPMAGR 149 Query: 164 THLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAK 223 THLQ A PVTFG+ ++ F R +R + R+ A+ S + Sbjct: 150 THLQHALPVTFGYKAAVWLSAFDRHAARLEEISPRVLVVEFSGASGTLASLGTRGLDVQR 209 Query: 224 ------ELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFV- 276 LG T +S RD + E + A+ + + +LA +I + T + V Sbjct: 210 ELARELNLGVPSITWHS-----ARDAVAETVQFLALVSGSLGKLAMDISIMMTTELGEVA 264 Query: 277 RLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEP 336 SS MPQK+NP EL+ A + S+L M + + Sbjct: 265 EPFVRHRGASSTMPQKQNPVSCELILAGARIVRNHATSMLDAMIHDFERATGPWHLEWSA 324 Query: 337 VFDALETLQIIILAISAMIEDLTVNKDRLQEAATK--SHSTATDLADWLVSHAGLPFREA 394 V + I+ M+ L V DR++E A + L H G +EA Sbjct: 325 VPEGFAVASGILYQAEFMLGGLQVFPDRMRENLDHSRGLIVAEAVMMALAPHTG--RKEA 382 Query: 395 HYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAE 454 H I A +++ L ++ M + P+ A+ D+ + + G+ A Sbjct: 383 HDIVYLGCRRAVEDKTGLFEVLRTMPEVAKPLGEEALRDLTDPRNYL-------GSAGAM 435 Query: 455 VLKQV 459 V + Sbjct: 436 VDNVL 440 |
>gi|49258707|pdb|1RE5|A Chain A, Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lactonizing Enzyme From Pseudomonas Putida Length = 450 | Back alignment and structure |
Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 78/415 (18%), Positives = 143/415 (34%), Gaps = 16/415 (3%) Query: 58 GIISSEEAQKIIEGLKVIRAEIVD-GSFVFSRDLEDIHM--NIEARLTSLIGSIAGKMHT 114 G++ I + R + + + + I + + + + + +H Sbjct: 43 GLVPHSAVAAIEAACQAERYDTGALANAIATAGNSAIPLVKALGKVIATGVPEAERYVHL 102 Query: 115 ARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTF 174 + D + L L +++ I DL KL L +A +H +T + G T LQ A PVT Sbjct: 103 GATSQDAMDTGLVLQLRDALDLIEADLGKLADTLSQQALKHADTPLVGRTWLQHATPVTL 162 Query: 175 GHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFR-EPTRN 233 G + R R + RL G A+ + + A+ L + + T Sbjct: 163 GMKLAGVLGALTRHRQRLQELRPRLLVLQFGGASGSLAALGSKAMPVAEALAEQLKLTLP 222 Query: 234 SIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFV-RLSDAFSTGSSIMPQK 292 + RD ++E S + A + + +I L + V S GSS MP K Sbjct: 223 EQPWHTQRDRLVEFASVLGLVAGSLGKFGRDISLLMQTEAGEVFEPSAPGKGGSSTMPHK 282 Query: 293 RNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAIS 352 RNP GA ++ R+ G L +L M + E + D + + Sbjct: 283 RNPVGAAVLIGAATRVPGLLSTLFAAMPQEHERSLGLWHAEWETLPDICCLVSGALRQAQ 342 Query: 353 AMIEDLTVNKDRLQEAAT--KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQC 410 + E + V+ R++ + A ++ L G AH++ A Q Sbjct: 343 VIAEGMEVDAARMRRNLDLTQGLVLAEAVSIVLAQRLGRDR--AHHLLEQCCQRAVAEQR 400 Query: 411 ELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNR 465 L + Q + + + +L + G V + V+ + Sbjct: 401 HLRAVLGDEPQVSAELSGEELDRLLDPAHYL-------GQARVWVARAVSEHQRF 448 |
gi|2392396|pdb|1JSW|A Chain A, Native L-Aspartate Ammonia Lyase Length = 478 | Back alignment and structure |
Score = 116 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 76/424 (17%), Positives = 142/424 (33%), Gaps = 42/424 (9%) Query: 44 ILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIV-DGSFVFSRDLED---------- 92 ++ K + I A II + F Sbjct: 52 VMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTN 111 Query: 93 -IHMNIEARLTSLIGSIAGKMHT------ARSRNDQVALDLRLWIKEKTLEITNDLKKLL 145 + NI L ++ +S ND R+ + +++ + + +L Sbjct: 112 EVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSLIKLVDAINQLR 171 Query: 146 TILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLG 205 KA E + + G T LQ A P+T G A+ + ++ + E L E LG Sbjct: 172 EGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRTAELLLEVNLG 231 Query: 206 AAALAG------TSFPIDRHFTAKELGF-REPTRNSIDSVSDRDFILECLSHSAICAMHM 258 A A+ P+ A+ GF P + I++ SD + A+ M Sbjct: 232 ATAIGTGLNTPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKM 291 Query: 259 SRLAEEIILWSTPQFNFVRLSD--AFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLL 316 S++ ++ L S+ + + GSSIMP K NP E+V ++ G ++ Sbjct: 292 SKICNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVT 351 Query: 317 TIMKGLPLAYSKDMQEDKEPVFDALETLQIII-LAISAMIEDLTVNKDRLQEAATKSHST 375 + L + + +F+++ L + I +T NK+ + S Sbjct: 352 MAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCINGITANKEVCEGYVYNSIGI 411 Query: 376 ATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDIL 435 T L ++ H G I G + + ++ L + + + DI Sbjct: 412 VTYLNPFIGHHNG-------DIVGKI---CAETGKSVREVVLE----RGLLTEAELDDIF 457 Query: 436 KVES 439 V++ Sbjct: 458 SVQN 461 |
>gi|157834306|pdb|1YFM|A Chain A, Recombinant Yeast Fumarase Length = 488 | Back alignment and structure |
Score = 113 bits (282), Expect = 8e-23, Method: Composition-based stats. Identities = 71/418 (16%), Positives = 140/418 (33%), Gaps = 41/418 (9%) Query: 51 TTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSR------------DLEDI-HMNI 97 + G + + ++ I + + + +D F E I + I Sbjct: 82 AIVNESLGGLDPKISKAIQQAADEVASGKLDDHFPLVVFQTGSGTQSNMNANEVISNRAI 141 Query: 98 E---ARLTSLIGSIAGKMHTARSRNDQVALDLRLW-IKEKTLEITNDLKKLLTILLDKAE 153 E ++ S + ++S ND + + + E+ +L L L K++ Sbjct: 142 EILGGKIGSKQVHPNNHCNQSQSSNDTFPTVMHIAASLQIQNELIPELTNLKNALEAKSK 201 Query: 154 EHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAG-- 211 E + + G THLQ A P+T G YV+ I R S++ L G A+ Sbjct: 202 EFDHIVKIGRTHLQDATPLTLGQEFSGYVQQVENGIQRVAHSLKTLSFLAQGGTAVGTGL 261 Query: 212 -----TSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEII 266 I + + + N ++++ D I+EC A + ++A++I Sbjct: 262 NTKPGFDVKIAEQISKETGLKFQTAPNRFEALAAHDAIVECSGALNTLACSLFKIAQDIR 321 Query: 267 LWST-PQFNFVRLS-DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPL 324 + P+ + L GSSIMP K NP E + ++ G ++ Sbjct: 322 YLGSGPRCGYHELMLPENEPGSSIMPGKVNPTQNEALTQVCVQVMGNNAAITFAGSQGQF 381 Query: 325 AYSKDMQEDKEPVFDALETLQIIILAIS-AMIEDLTVNKDRLQEAATKSHSTATDLADWL 383 + + +++ + + +E + N+ R+ E TKS T L + Sbjct: 382 ELNVFKPVMIANLLNSIRLITDAAYSFRVHCVEGIKANEPRIHELLTKSLMLVTALNPKI 441 Query: 384 VSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSI 441 + A K L + L + + + + E + Sbjct: 442 ----------GYDAASKVAKNAHKKGITLKESALE----LGVLTEKEFDEWVVPEHML 485 |
>gi|196049942|pdb|3E04|A Chain A, Crystal Structure Of Human Fumarate Hydratase Length = 490 | Back alignment and structure |
Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 66/422 (15%), Positives = 140/422 (33%), Gaps = 43/422 (10%) Query: 48 KVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVF--------SRDLEDIHMNIEA 99 + + G + + A I++ + ++ F ++ +++ I Sbjct: 81 RAAAEVNQDYG-LDPKIANAIMKAADEVAEGKLNDHFPLVVWQTGSGTQTNMNVNEVISN 139 Query: 100 RLTSLIGSIAG---------KMHTARSRNDQVALDLRLWI-KEKTLEITNDLKKLLTILL 149 R ++G G ++ ++S ND + + E + L+KL L Sbjct: 140 RAIEMLGGELGSKIPVHPNDHVNKSQSSNDTFPTAMHIAAAIEVHEVLLPGLQKLHDALD 199 Query: 150 DKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAAL 209 K++E I G TH Q A P+T G YV+ ++R ++ R+ E G A+ Sbjct: 200 AKSKEFAQIIKIGRTHTQDAVPLTLGQEFSGYVQQVKYAMTRIKAAMPRIYELAAGGTAV 259 Query: 210 AGT------SFPIDRHFTAKELGFREPT-RNSIDSVSDRDFILECLSHSAICAMHMSRLA 262 A G T N ++++ D ++E A + ++A Sbjct: 260 GTGLNTRIGFAEKVAAKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIA 319 Query: 263 EEIILWSTPQFNFVR--LSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMK 320 +I + + + + GSSIMP K NP E + ++ G +++ Sbjct: 320 NDIRFLGSGPRSGLGELILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGS 379 Query: 321 GLPLAYSKDMQEDKEPVFDALETLQI-IILAISAMIEDLTVNKDRLQEAATKSHSTATDL 379 + + V + L + + + N +R+ + +S T L Sbjct: 380 NGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESLMLVTAL 439 Query: 380 ADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVES 439 + + A KN L + + + + + +K + Sbjct: 440 NPHI----------GYDKAAKIAKTAHKNGSTLKETAIE----LGYLTAEQFDEWVKPKD 485 Query: 440 SI 441 + Sbjct: 486 ML 487 |
>gi|254221004|pdb|3GTD|A Chain A, 2.4 Angstrom Crystal Structure Of Fumarate Hydratase From Rickettsia Prowazekii Length = 482 | Back alignment and structure |
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 67/419 (15%), Positives = 132/419 (31%), Gaps = 42/419 (10%) Query: 51 TTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSR------------DLEDIHMNIE 98 + + G + + A I + + I A + +F E I Sbjct: 77 AQVNYEFGDLEYKIATSIDKAIDRILAGEFEDNFPLVVWQTGSGTQTNMNMNEVIASIAN 136 Query: 99 ARLTSLIG-----SIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTIL-LDKA 152 LT G ++ +S ND + + T + L DK+ Sbjct: 137 EELTGKKGGKFPVHPNDHVNKGQSSNDSFPTAMHIATVLATKQQLIPALNNLLTYLQDKS 196 Query: 153 EEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAG- 211 ++ I G THLQ A P+T Y+ + R D+++++ G A+ Sbjct: 197 KDWDKIIKIGRTHLQDATPLTLKQEFSGYITQIEYALERIEDALKKVYLLAQGGTAVGTG 256 Query: 212 ------TSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEI 265 + + N +S++ D ++E A+ + ++A +I Sbjct: 257 INSKIGFDIKFAQKVAEFTQQPFKTAPNKFESLAAHDALVEFSGTLNTIAVSLMKIANDI 316 Query: 266 ILWSTPQFNFVRLSD--AFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLP 323 L + + GSSIMP K NP E + ++ G +++ Sbjct: 317 RLLGSGPRCGLGELHLPENEPGSSIMPGKVNPTQVEALTMVCTQVMGNHVTVTIAGSNGH 376 Query: 324 LAYSKDMQEDKEPVFDALETLQIII-LAISAMIEDLTVNKDRLQEAATKSHSTATDLADW 382 L + + ++E L + ++ ++ L N R+ KS T L Sbjct: 377 LELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIARINTLRDKSLMLVTVLNPH 436 Query: 383 LVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSI 441 + + A K L + ++++ + I+ E I Sbjct: 437 I----------GYDNAAKIAKEAHKYGITLKEAA----KKLNFLSEEEFDKIVVPEKMI 481 |
>gi|159795583|pdb|2VD6|A Chain A, Human Adenylosuccinate Lyase In Complex With Its Substrate N6-(1,2-Dicarboxyethyl)-Amp, And Its Products Amp And Fumarate. Length = 503 | Back alignment and structure |
Score = 75.3 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 75/430 (17%), Positives = 140/430 (32%), Gaps = 32/430 (7%) Query: 51 TTMLAKQGI-ISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIA 109 G+ I+ E+ Q++ L+ I + + R D+ M A Sbjct: 69 AEAEQTLGLPITDEQIQEMKSNLENI--DFKMAAEEEKRLRHDV-MAHVHTFGHCCPKAA 125 Query: 110 GKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTA 169 G +H + + ++ + L ++++ L D A+E + GFTH Q A Sbjct: 126 GIIHLGATSCYVGDNTDLIILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPA 185 Query: 170 QPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSF----PIDRHFTAKEL 225 Q T G C +++ D+ + L + SF D H + Sbjct: 186 QLTTVGKRCCLWIQDLCMDLQNLKRVRDDLRFRGVKGTTGTQASFLQLFEGDDHKVEQLD 245 Query: 226 GFREPTRNSIDSVSDRD------FILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLS 279 + +E LS A + ++ +I L + + Sbjct: 246 KMVTEKAGFKRAFIITGQTYTRKVDIEVLSVLASLGASVHKICTDIRLLANLK-EMEEPF 304 Query: 280 DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVF- 338 + GSS MP KRNP +E + + ++ L + D ++ Sbjct: 305 EKQQIGSSAMPYKRNPMRSERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLA 364 Query: 339 DALETLQIIILAISAMIEDLTVNKDRLQEAATKS-HSTATDLADWLVSHAGLPFREAHYI 397 +A T I+ + + E L V ++ + AT+ + AG ++ H Sbjct: 365 EAFLTADTILNTLQNISEGLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQDCHEK 424 Query: 398 TGCTVSLA---EKNQCELAKLPLAMLQQ---ISPVITSAVYDILKVESSISSRKSFGGTC 451 A K + L + +Q SP I S + +L SF G Sbjct: 425 IRVLSQQAASVVKQEGGDNDL-IERIQVDAYFSP-IHSQLDHLLDP-------SSFTGRA 475 Query: 452 AAEVLKQVTY 461 + +V + + Sbjct: 476 SQQVQRFLEE 485 |
>gi|119390451|pdb|2J91|A Chain A, Crystal Structure Of Human Adenylosuccinate Lyase In Complex With Amp Length = 503 | Back alignment and structure |
Score = 74.9 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 74/430 (17%), Positives = 140/430 (32%), Gaps = 32/430 (7%) Query: 51 TTMLAKQGI-ISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIA 109 G+ I+ E+ +++ L+ I + + R D+ M A Sbjct: 69 AEAEQTLGLPITDEQIREMKSNLENI--DFKMAAEEEKRLRHDV-MAHVHTFGHCCPKAA 125 Query: 110 GKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTA 169 G +H + + ++ + L ++++ L D A+E + GFTH Q A Sbjct: 126 GIIHLGATSCYVGDNTDLIILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPA 185 Query: 170 QPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSF----PIDRHFTAKEL 225 Q T G C +++ D+ + L + SF D H + Sbjct: 186 QLTTVGKRCCLWIQDLCMDLQNLKRVRDDLRFRGVKGTTGTQASFLQLFEGDDHKVEQLD 245 Query: 226 GFREPTRNSIDSVSDRD------FILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLS 279 + +E LS A + ++ +I L + + Sbjct: 246 KMVTEKAGFKRAFIITGQTYTRKVDIEVLSVLASLGASVHKICTDIRLLANLK-EMEEPF 304 Query: 280 DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVF- 338 + GSS MP KRNP +E + + ++ L + D ++ Sbjct: 305 EKQQIGSSAMPYKRNPMRSERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLA 364 Query: 339 DALETLQIIILAISAMIEDLTVNKDRLQEAATKS-HSTATDLADWLVSHAGLPFREAHYI 397 +A T I+ + + E L V ++ + AT+ + AG ++ H Sbjct: 365 EAFLTADTILNTLQNISEGLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQDCHEK 424 Query: 398 TGCTVSLA---EKNQCELAKLPLAMLQQ---ISPVITSAVYDILKVESSISSRKSFGGTC 451 A K + L + +Q SP I S + +L SF G Sbjct: 425 IRVLSQQAASVVKQEGGDNDL-IERIQVDAYFSP-IHSQLDHLLDP-------SSFTGRA 475 Query: 452 AAEVLKQVTY 461 + +V + + Sbjct: 476 SQQVQRFLEE 485 |
>gi|161761247|pdb|3BHG|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From Legionella Pneumophila Length = 459 | Back alignment and structure |
Score = 53.7 bits (127), Expect = 7e-05, Method: Composition-based stats. Identities = 61/412 (14%), Positives = 119/412 (28%), Gaps = 47/412 (11%) Query: 61 SSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRND 120 + EA+KI K + L+D E S +H A + D Sbjct: 78 NESEAEKI----KEFEKQTNHDVKAVEYYLQDKFQENEQL-----KSCVAFIHFACTSED 128 Query: 121 QVALDLRLWIKEKTLEITNDLK-KLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCM 179 L L IK+ ++ ++ + ++H + TH Q A P T G + Sbjct: 129 INNLAYALXIKQAIAQVIQPTIAEIXGSITLLGKQHADVAXLSRTHGQPATPTTXGKELV 188 Query: 180 AYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNS----- 234 +V R + + + A+ + + + S Sbjct: 189 NFVARLKRPQQQLAEVLIPAK----FNGAVGNYNAHVAAYPEVDWRKHCANFVTSLGLSF 244 Query: 235 ---IDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQ 291 + D I E + ++I + + + + + A GSS P Sbjct: 245 NAYTTQIEPHDGIAEVSQIXVRINNILLDYTQDIWSYISLGYFK-QKTIAEEVGSSTXPH 303 Query: 292 KRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDK--EPVFDALETLQIIIL 349 K NP E G L + K +D+ + + A I Sbjct: 304 KVNPIDFENAEGNLG--LSNALFIHFANKLTQSRXQRDLSDSTVLRNLGVAFSYSLIAYH 361 Query: 350 AISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVS----LA 405 +++ + L +NK LQ+ +++ + + P A+ A Sbjct: 362 SVAKGNDKLQINKSALQKDLSENWEVLAEAIQTVXRRYNEP--NAYEQLKELTRGQXIDA 419 Query: 406 EKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLK 457 E + + L + + + + L E ++ G V Sbjct: 420 ENLKKFIKTLSIPEEAK------AELXK-LTPE-------TYTGLATQLVKA 457 |
>gi|256599714|pdb|3GZH|A Chain A, Crystal Structure Of Phosphate-Bound Adenylosuccinate Lyase From E. Coli Length = 482 | Back alignment and structure |
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 65/422 (15%), Positives = 132/422 (31%), Gaps = 50/422 (11%) Query: 49 VHTTMLAKQGIISSEEAQKIIEGLKVI-----RAEIVDGSFVFSRDLEDIHMNIEARLTS 103 H + + A I L I + + D+ +E L Sbjct: 75 AHAA----IKEVPAFAADAIGY-LDAIVANFSEEDAARIKTIERTTNHDVK-AVEYFLKE 128 Query: 104 LI------GSIAGKMHTARSRNDQVALDLRLWIKEKTLEIT-NDLKKLLTILLDKAEEHH 156 + +++ +H A + D L L +K E+ ++L+ + D A ++ Sbjct: 129 KVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQYR 188 Query: 157 NTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPI 216 + + TH Q A P T G EM + LG A ++ Sbjct: 189 DIPLLSRTHGQPATPSTIG------KEMANVAYRMERQYRQLNQVEILGKINGAVGNYNA 242 Query: 217 D---------RHFTAKELGFREPTRNSIDSVS-DRDFILECLSHSAICAMHMSRLAEEII 266 F+ + + N + D+I E A + ++ Sbjct: 243 HIAAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVW 302 Query: 267 LWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAY 326 + +F + + A GSS MP K NP E G + L + LP++ Sbjct: 303 GYIALN-HFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLG---LSNAVLQHLASKLPVSR 358 Query: 327 SKDMQEDKEPVFDALETLQIIILAISAMIEDL---TVNKDRLQEAATKSHSTATDLADWL 383 + D + + + ++A + ++ + VN+D L + + + + Sbjct: 359 WQRDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTV 418 Query: 384 VSHAGL--PFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSI 441 + G+ P+ + +T AE + + L L ++ + + I Sbjct: 419 MRRYGIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKAR-------LKAMTPANYI 471 Query: 442 SS 443 Sbjct: 472 GR 473 |
>gi|118137741|pdb|2FEL|A Chain A, 3-Carboxy-Cis,Cis-Muconate Lactonizing Enzyme From Agrobacterium Radiobacter S2 Length = 359 | Back alignment and structure |
Score = 84.1 bits (206), Expect = 5e-14, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 115/344 (33%), Gaps = 18/344 (5%) Query: 15 GGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSK----VHTTMLAKQGIISSEEAQKIIE 70 G F S I+E + + DI A+ I + +EA+ I+ Sbjct: 12 SGLF--GDSEIIELFS---------AKADIDAMIRFETALAQAEAEASIFADDEAEAIVS 60 Query: 71 GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130 GL A++ ++D + I ++ G A K+H + D + L L + Sbjct: 61 GLSEFAADMSALRHGVAKDGVVVPELIRQMRAAVAGQAADKVHFGATSQDVIDTSLMLRL 120 Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190 K I L L+ L D A + + G+T +Q A +T ++ R + Sbjct: 121 KMAAEIIATRLGHLIDTLGDLASRDGHKPLTGYTRMQAAIGITVADRAAGWIAPLERHLL 180 Query: 191 RFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 R + G AA + +L R + + RD I E + Sbjct: 181 RLETFAQNGFALQFGGAAGTLEKLGDNAGAVRADLAKRLGLADRPQWHNQRDGIAEFANL 240 Query: 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRING 310 ++ + + ++I L + + + + GSS MP K+NP AE + Sbjct: 241 LSLVTGTLGKFGQDIALMA--EIGS-EIRLSGGGGSSAMPHKQNPVNAETLVTLARFNAV 297 Query: 311 ALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAM 354 + +L + + + + +L + Sbjct: 298 QISALHQSLVQEQERSGAGWMLEWLTLPQMVTATGTSLLVAERL 341 |
>gi|13096685|pdb|1DOF|A Chain A, The Crystal Structure Of Adenylosuccinate Lyase From Pyrobaculum Aerophilum: Insights Into Thermal Stability And Human Pathology Length = 403 | Back alignment and structure |
Score = 73.7 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 66/405 (16%), Positives = 134/405 (33%), Gaps = 32/405 (7%) Query: 34 DFDKK--------------LFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEI 79 FD + + + + L + G+ A++ + + Sbjct: 5 PFDWRYGSEEIRRLFTNEAIINAYLEVERALVCALEELGV-----AER--GCCEKVNKAS 57 Query: 80 VDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWIKEKTLEITN 139 V V+ + E H + L S +H + ND + L I+ + Sbjct: 58 VSADEVYRLERETGHDILSLVLLLEQKSGCRYVHYGATSNDIIDTAWALLIRRALAAVKE 117 Query: 140 DLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERL 199 + + L A ++ M G TH Q A+P+T G Y + + E + Sbjct: 118 KARAVGDQLASMARKYKTLEMVGRTHGQWAEPITLGFKFANYYYELYIACRQLALAEEFI 177 Query: 200 DECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDR-DFILECLSHSAICAMHM 258 GA + + + + I + + S A+ A Sbjct: 178 RAKIGGAVGTMASWGELGLEVRRRVAERLGLPHHVITTQVAPRESFAVLASALALMAAVF 237 Query: 259 SRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTI 318 RLA EI S P+ + GSS MP K NP +E + + + Sbjct: 238 ERLAVEIRELSRPE---IGEVVEGGGGSSAMPHKANPTASERIVSLARYVRALT---HVA 291 Query: 319 MKGLPLAYSKDMQED---KEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSHST 375 + + L + +D+ + + +AL L I+ + +++++ ++++R+ E K+ Sbjct: 292 FENVALWHERDLTNSANERVWIPEALLALDEILTSALRVLKNVYIDEERITENLQKALPY 351 Query: 376 A-TDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAM 419 T+ + G EA+ +L + Q + + Sbjct: 352 ILTEFHMNRMIKEGASRAEAYKKAKEVKALTFEYQKWPVERLIED 396 |
>gi|60594392|pdb|1YIS|A Chain A, Structural Genomics Of Caenorhabditis Elegans: Adenylosuccinate Lyase Length = 478 | Back alignment and structure |
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 60/368 (16%), Positives = 119/368 (32%), Gaps = 28/368 (7%) Query: 63 EEAQKIIEGLKVI----RAEIVDGSFVFSRDL---------EDIHMNIEARLTSLIGSIA 109 EA+K GLK + E VF D+ L + A Sbjct: 42 AEAEK-ELGLKQVTQDAIDEXKSNRDVFDWPFIRSEERKLKHDV-XAHNHAFGKLCPTAA 99 Query: 110 GKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTA 169 G +H + + ++ I ++ L + ++ + G TH QTA Sbjct: 100 GIIHLGATSCFVQDNADLIAYRDSIDHILKRFATVIDRLAAFSLKNKEVVTVGRTHYQTA 159 Query: 170 QPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTS----FPIDRHFTAKEL 225 VT G + + + + ++ + A S F D Sbjct: 160 SLVTVGKRGVLWAQELLXAFQSLSEFRDKXRFRGIKGATGTQDSFLTLFAGDESKVEALD 219 Query: 226 GFREPTRNSID------SVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLS 279 N + R + + ++ ++ +I + + Sbjct: 220 ELVTKKANFSNRFLITGQTYSRQQDSQLVFSLSLLGAAAKKVCTDIRVLQAFG-ELLEPF 278 Query: 280 DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVF- 338 + GSS P K+NP +E A + ++ A LTI+ L + D + + Sbjct: 279 EKDQIGSSAXPYKKNPXKSERCCALSRKLINAPQEALTILADQGLERTLDDSAGRRXLIP 338 Query: 339 DALETLQIIILAISAMIEDLTVNKDRLQEAATKSHS-TATDLADWLVSHAGLPFREAHYI 397 D L T + ++ + + E L+V D +++ + + A ++ G+ ++AH + Sbjct: 339 DVLLTAEALLTTLQNIFEGLSVQTDNVKKIVEDEIAFLGLEKAXXXLTEEGVDRQQAHAV 398 Query: 398 TGCTVSLA 405 T A Sbjct: 399 IRKTALEA 406 |
>gi|157835920|pdb|2QGA|B Chain B, Plasmodium Vivax Adenylosuccinate Lyase Pv003765 With Amp Bound Length = 465 | Back alignment and structure |
Score = 56.8 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 94/312 (30%), Gaps = 26/312 (8%) Query: 16 GRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVI 75 GR+ + + + L + I+ L ++ + + +E L I Sbjct: 13 GRYKKACGELSAFFSE-----HALIKHRIIVEVRWLLFLNEEELFFEKVTDHSVEVLNQI 67 Query: 76 R-----AEIVDGSFVFSRDLEDIHMNIEARLTSLIGS--------IAGKMHTARSRNDQV 122 ++I + D+ +E + + + I +H + D Sbjct: 68 ATNITDSDIARVKAIEEETNHDVK-AVEYFVKEKLKNSKREDLLKIKEYVHYLCTSEDIN 126 Query: 123 ALDLRLWIKEKTLEI-TNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAY 181 + +K ++ L+K++ L D A E+ + + TH Q A TFG + Sbjct: 127 NVAYATCLKACLNDVVIPCLEKIMLKLKDLAVEYSHVPLLSRTHGQPASSTTFGKEMANF 186 Query: 182 VEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRN-----SID 236 + A D + F + N Sbjct: 187 YARIHHHVGVIRRVKVCAKFNGAVGNFNAHKVASKDTDWVNTIGLFLKKHFNLTYSIYCT 246 Query: 237 SVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPD 296 + D D+I E A + L +I L+ + +++ + GSS MP K NP Sbjct: 247 QIQDHDYICELCDGLARANGTLIDLCVDIWLYISNNLLKLKVKEKEV-GSSTMPHKVNPI 305 Query: 297 GAELVRAKTGRI 308 E Sbjct: 306 DFENAEGNLHIA 317 |
>gi|114794583|pdb|2HVG|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From Plasmodium Vivax Length = 482 | Back alignment and structure |
Score = 54.5 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 92/312 (29%), Gaps = 26/312 (8%) Query: 16 GRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVI 75 GR+ + + + L + I+ L ++ + + +E L I Sbjct: 30 GRYKKACGELSAFFSE-----HALIKHRIIVEVRWLLFLNEEELFFEKVTDHSVEVLNQI 84 Query: 76 R-----AEIVDGSFVFSRDLEDIHMNIEARLTSLIGS--------IAGKMHTARSRNDQV 122 ++I + D+ +E + + + I +H + D Sbjct: 85 ATNITDSDIARVKAIEEETNHDVK-AVEYFVKEKLKNSKREDLLKIKEYVHYLCTSEDIN 143 Query: 123 ALDLRLWIKEKTLEI-TNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAY 181 + +K ++ L+K+ L D A E+ + + TH Q A TFG + Sbjct: 144 NVAYATCLKACLNDVVIPCLEKIXLKLKDLAVEYSHVPLLSRTHGQPASSTTFGKEXANF 203 Query: 182 VEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRN-----SID 236 + A D + F + N Sbjct: 204 YARIHHHVGVIRRVKVCAKFNGAVGNFNAHKVASKDTDWVNTIGLFLKKHFNLTYSIYCT 263 Query: 237 SVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPD 296 + D D+I E A + L +I L+ + +++ + GSS P K NP Sbjct: 264 QIQDHDYICELCDGLARANGTLIDLCVDIWLYISNNLLKLKVKEKEV-GSSTXPHKVNPI 322 Query: 297 GAELVRAKTGRI 308 E Sbjct: 323 DFENAEGNLHIA 334 |
Homologous Structures in PDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 473 | argininosuccinate lyase [Candidatus Liberibacter asiati | ||
1k7w_A | 468 | Delta 2 crystallin; eye lens protein, argininosuccinate | 1e-126 | |
2e9f_A | 462 | Argininosuccinate lyase; alpha helix bundle; HET: ARG; | 1e-106 | |
1tj7_A | 457 | Argininosuccinate lyase; crystallin, E. coli, fumarase, | 1e-103 | |
1q5n_A | 454 | 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromat | 1e-71 | |
1re5_A | 450 | 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer | 3e-40 | |
3no9_A | 475 | Fumarase C, fumarate hydratase class II; APO, structura | 6e-76 | |
3ocf_A | 478 | Fumarate lyase:delta crystallin; fumarase, brucellosis, | 3e-73 | |
1j3u_A | 468 | Aspartase; multi-domains, lyase; 2.50A {Bacillus SP} SC | 4e-72 | |
1jsw_A | 478 | L-aspartase, L-aspartate ammonia-lyase; amino acid ammo | 3e-70 | |
3gtd_A | 482 | Fumarase C, fumarate hydratase class II; structural gen | 8e-67 | |
1fur_A | 467 | Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB | 2e-60 | |
2pfm_A | 444 | Adenylosuccinate lyase; PURB, purine biosynthesis; 2.00 | 1e-57 | |
1yfm_A | 488 | Fumarase, YFUM; lyase, krebs cycle, active site water, | 4e-50 | |
1c3c_A | 429 | Protein (adenylosuccinate lyase); purine biosynthesis; | 1e-49 | |
1vdk_A | 466 | Fumarase C, fumarate hydratase class II; TCA cycle, rik | 5e-45 | |
1dof_A | 403 | Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyr | 9e-32 | |
3bhg_A | 459 | Adenylosuccinate lyase; structural genomics, PSI-2, pro | 1e-30 | |
2qga_B | 465 | Adenylosuccinate lyase; malaria, PV003765, SGC, structu | 5e-30 | |
3e04_A | 490 | Fumarase, fumarate hydratase; TCA cycle, structural gen | 9e-49 | |
3c8t_A | 451 | Fumarate lyase; structural genomics, PSI-2, protein str | 2e-42 | |
2fel_A | 359 | 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegra | 2e-38 | |
1yis_A | 478 | Adenylosuccinate lyase; structural genomics, PSI, prote | 8e-36 | |
2j91_A | 503 | Adenylosuccinate lyase; disease mutation, adenylosuccin | 1e-30 | |
2ptr_A | 462 | Adenylosuccinate lyase; mutant-substrate complex; HET: | 4e-29 |
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A Length = 468 | Back alignment and structure |
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Score = 447 bits (1151), Expect = e-126 Identities = 196/472 (41%), Positives = 295/472 (62%), Gaps = 5/472 (1%) Query: 1 MSKKIKSNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGII 60 M+ + + + ++WGGRFS S IMEK+N SI +D++L E DI GS + L K GI+ Sbjct: 1 MASEARGD---KLWGGRFSGSTDPIMEKLNSSIAYDQRLSEVDIQGSMAYAKALEKAGIL 57 Query: 61 SSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRND 120 + E +KI+ GL+ I E G FV + EDIH E RL LIG IAGK+HT RSRND Sbjct: 58 TKTELEKILSGLEKISEEWSKGVFVVKQSDEDIHTANERRLKELIGDIAGKLHTGRSRND 117 Query: 121 QVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMA 180 QV DL+L++K I+ L +L+ L+++A + I+PG+THLQ AQP+ + ++ Sbjct: 118 QVVTDLKLFMKNSLSIISTHLLQLIKTLVERAAIEIDVILPGYTHLQKAQPIRWSQFLLS 177 Query: 181 YVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSD 240 + RD R + +R++ PLG+ ALAG IDR EL F + NS+D++S+ Sbjct: 178 HAVALTRDSERLGEVKKRINVLPLGSGALAGNPLDIDREMLRSELEFASISLNSMDAISE 237 Query: 241 RDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAEL 300 RDF++E LS + + +H+S++AE++I++ST +F F+ LSDAFSTG+S+MPQK+NPD EL Sbjct: 238 RDFVVEFLSFATLLMIHLSKMAEDLIIYSTSEFGFLTLSDAFSTGASLMPQKKNPDSLEL 297 Query: 301 VRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTV 360 +R+K GR+ G L S+L ++KGLP Y+KD+QEDKE VFD ++TL ++ + +I L + Sbjct: 298 IRSKAGRVFGRLASILMVLKGLPSTYNKDLQEDKEAVFDVVDTLTAVLQVATGVISTLQI 357 Query: 361 NKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAML 420 +K+ +++A T ATDLA +LV G+PFR+AH +G V LAE + KL L L Sbjct: 358 SKENMEKALTP-EMLATDLALYLVRK-GVPFRQAHTASGKAVHLAETKGITINKLSLEDL 415 Query: 421 QQISPVITSAVYDILKVESSISSRKSFGGTCAAEVLKQVTYWRNRIQNIPKK 472 + ISP +S V + +S+ + GGT + V Q+ R ++ ++ Sbjct: 416 KSISPQFSSDVSQVFNFVNSVEQYTALGGTAKSSVTTQIEQLRELMKKQKEQ 467 |