254780509

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/101 (68%), Positives = 80/101 (79%), Gaps = 3/101 (2%)

Query: 15  MGGNLAKISQDD---SSFQSFLQLKDVQEACDKSKSVPEMTQKLQGIMFQYFIKSILPEE 71
           M  NL KI  ++    SF SFLQ K+VQ+  D+SK +PE  QKLQG+MFQYFIKSILPEE
Sbjct: 1   MDSNLTKIVPNNYSSESFSSFLQTKNVQKTSDQSKYIPEAMQKLQGVMFQYFIKSILPEE 60

Query: 72  TVKSLGGGFNGDFWQEILAENISDVIVKQQRITLDLPEISK 112
           T+KSLGGGF GDFW+EILAENIS+VIVKQQRIT +L   SK
Sbjct: 61  TIKSLGGGFYGDFWKEILAENISNVIVKQQRITFNLSNTSK 101

Species: Candidatus Liberibacter solanacearum
Genus: Candidatus Liberibacter
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 37/56 (66%)

Query: 44  KSKSVPEMTQKLQGIMFQYFIKSILPEETVKSLGGGFNGDFWQEILAENISDVIVK 99
           ++K +PE  +K + ++ Q F+KS+LP E+    G G +GD W+ ++AE I DV+ K
Sbjct: 63  EAKKIPETYRKFEAMVLQNFVKSMLPSESENVFGKGTSGDIWKSMMAEQIGDVLAK 118

Species: Sinorhizobium meliloti
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 37/56 (66%)

Query: 44  KSKSVPEMTQKLQGIMFQYFIKSILPEETVKSLGGGFNGDFWQEILAENISDVIVK 99
           ++K +PE  +K + ++ Q F+KS+LP E+    G G +GD W+ ++AE I DV+ K
Sbjct: 73  EAKKIPETYRKFEAMVLQNFVKSMLPSESENVFGKGTSGDIWKSMMAEQIGDVLAK 128

Species: Sinorhizobium meliloti
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score = 53.5 bits (127), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 39/62 (62%)

Query: 44  KSKSVPEMTQKLQGIMFQYFIKSILPEETVKSLGGGFNGDFWQEILAENISDVIVKQQRI 103
           ++K +PE  +K + ++ Q F+KS+LP ++    G G +GD W+ ++AE I DV+ K   I
Sbjct: 72  EAKKIPETYRKFEAMVLQNFVKSMLPSDSENVYGKGTSGDIWKSMMAEQIGDVLSKGGGI 131

Query: 104 TL 105
            +
Sbjct: 132 GI 133

Species: Sinorhizobium medicae
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score = 52.0 bits (123), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 36/56 (64%)

Query: 44  KSKSVPEMTQKLQGIMFQYFIKSILPEETVKSLGGGFNGDFWQEILAENISDVIVK 99
           K++ VPE  +K + ++ Q F+KS+LP E+    G G  GD W+ ++AE + +V+ K
Sbjct: 72  KTEEVPESYRKFEAMVLQNFVKSMLPNESEDVYGKGATGDIWKGMMAEQLGNVMAK 127

Species: Rhizobium leguminosarum
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 35/56 (62%)

Query: 44  KSKSVPEMTQKLQGIMFQYFIKSILPEETVKSLGGGFNGDFWQEILAENISDVIVK 99
           K++ VPE  +K + ++ Q F+KS+LP E+    G G  GD W+ ++AE + + + K
Sbjct: 72  KAEEVPESYRKFEAMVLQNFVKSMLPNESEDVYGKGATGDIWKGMMAEQLGNTMAK 127

Species: Rhizobium leguminosarum
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 35/56 (62%)

Query: 44  KSKSVPEMTQKLQGIMFQYFIKSILPEETVKSLGGGFNGDFWQEILAENISDVIVK 99
           K++ VPE  +K + ++ Q F+KS+LP E+    G G  GD W+ ++AE + + + K
Sbjct: 72  KTEEVPESYRKFEAMVLQNFVKSMLPSESEDVYGKGATGDIWKGMMAEQLGNTMAK 127

Species: Rhizobium etli
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 35/56 (62%)

Query: 44  KSKSVPEMTQKLQGIMFQYFIKSILPEETVKSLGGGFNGDFWQEILAENISDVIVK 99
           K++ VPE  +K + ++ Q F+KS+LP E+    G G  GD W+ ++AE + + + K
Sbjct: 53  KAEEVPESYRKFEAMVLQNFVKSMLPSESEDVYGKGATGDIWKGMMAEQLGNTMAK 108

Species: Rhizobium etli
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 35/56 (62%)

Query: 44  KSKSVPEMTQKLQGIMFQYFIKSILPEETVKSLGGGFNGDFWQEILAENISDVIVK 99
           K++  PE  +K + ++ Q F+KS+LP E+    G G  GD W+ ++AE + +V+ K
Sbjct: 72  KAEEAPESYRKFEAMVLQNFVKSMLPSESEDVYGKGATGDIWKGMMAEQLGNVMAK 127

Species: Rhizobium leguminosarum
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 35/56 (62%)

Query: 44  KSKSVPEMTQKLQGIMFQYFIKSILPEETVKSLGGGFNGDFWQEILAENISDVIVK 99
           K++ VPE  +K + ++ Q F+KS+LP E+    G G  GD W+ ++AE + + + K
Sbjct: 72  KAEEVPESYRKFEAMVLQNFVKSMLPSESEDVYGKGATGDIWKGMMAEQLGNTMAK 127

Species: Rhizobium etli
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

Probab=99.90  E-value=1.1e-23  Score=149.58  Aligned_cols=84  Identities=18%  Similarity=0.296  Sum_probs=75.3

Q ss_pred             HHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             544323120789999987022855479999999999999999999951021--123357533368999999999999998
Q gi|254780509|r   22 ISQDDSSFQSFLQLKDVQEACDKSKSVPEMTQKLQGIMFQYFIKSILPEET--VKSLGGGFNGDFWQEILAENISDVIVK   99 (112)
Q Consensus        22 is~~~~s~q~~~~Lk~~~~~~~~~~~l~~~a~~fEa~fl~~~lksmr~~~~--~~~lggg~a~d~~~sMl~ee~a~~iAk   99 (112)
T Consensus         5 ~~~~a~D~~~L~~Lk~-~a~~d~~~al~~vA~QFEalF~q~mlKsMR~A~~~~~d~l~~s~~~~~y~~M~DqQla~~ls~   83 (313)
T PRK05684          5 LSGAALDLQSLNSLKA-KAGKDPAANLRKVAQQFEGIFVQMMLKSMRDANPVFKDGLMNSQQTKLYTSMYDQQIAQQLSA   83 (313)
T ss_pred             HHHHHCCHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf             0022218788999998-854292999999999999999999999998445523588878806779999999999999860


Q ss_pred             CCCCCCC
Q ss_conf             0798756
Q gi|254780509|r  100 QQRITLD  106 (112)
Q Consensus       100 ~ggiGL~  106 (112)
T Consensus        84 ~~glGla   90 (313)
T PRK05684         84 GGGLGLA   90 (313)
T ss_pred             CCCCCHH
T ss_conf             7998499

Probab=99.89  E-value=2.1e-23  Score=148.20  Aligned_cols=82  Identities=12%  Similarity=0.216  Sum_probs=75.0

Q ss_pred             HHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             44323120789999987022855479999999999999999999951021123357533368999999999999998079
Q gi|254780509|r   23 SQDDSSFQSFLQLKDVQEACDKSKSVPEMTQKLQGIMFQYFIKSILPEETVKSLGGGFNGDFWQEILAENISDVIVKQQR  102 (112)
Q Consensus        23 s~~~~s~q~~~~Lk~~~~~~~~~~~l~~~a~~fEa~fl~~~lksmr~~~~~~~lggg~a~d~~~sMl~ee~a~~iAk~gg  102 (112)
T Consensus        12 ~~~a~D~~~L~~Lk~-~a~~~~~~al~~vA~QFEalF~qmmlKsMR~a~~~~~l~~s~~~~~y~~M~DqQla~~ls~~-G   89 (318)
T PRK12709         12 QRFALDVQGFDALRA-QAKASPQAGAKMVAGQFDAMFTQMMLKSMRDATPSDGLFDSHTSKMYTSMLDQQLAQQMSSK-G   89 (318)
T ss_pred             HHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-C
T ss_conf             677745776999999-87419399999999999999999999999846767888787067899999999999998537-8


Q ss_pred             CCCC
Q ss_conf             8756
Q gi|254780509|r  103 ITLD  106 (112)
Q Consensus       103 iGL~  106 (112)
T Consensus        90 ~Gla   93 (318)
T PRK12709         90 IGVA   93 (318)
T ss_pred             CCHH
T ss_conf             7799

Probab=99.89  E-value=2.5e-23  Score=147.75  Aligned_cols=79  Identities=18%  Similarity=0.307  Sum_probs=72.1

Q ss_pred             HHHCCHHHHHHHHCCCCHH--HHHH--HHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             3120789999987022855--4799--999999999999999999510211233--575333689999999999999980
Q gi|254780509|r   27 SSFQSFLQLKDVQEACDKS--KSVP--EMTQKLQGIMFQYFIKSILPEETVKSL--GGGFNGDFWQEILAENISDVIVKQ  100 (112)
Q Consensus        27 ~s~q~~~~Lk~~~~~~~~~--~~l~--~~a~~fEa~fl~~~lksmr~~~~~~~l--ggg~a~d~~~sMl~ee~a~~iAk~  100 (112)
T Consensus         3 ~D~~~L~~Lk~-kA~~dP~dG~~~~~~~~ArQFEalF~~mMLKsMReAt~k~glni~~S~~~~~y~~m~DqQ~a~~L~~~   81 (332)
T TIGR02541         3 IDAQSLDELKA-KAVKDPKDGEAAKLTEAARQFEALFLNMMLKSMREATPKDGLNIFDSQQTRFYQQMLDQQLAQQLSAR   81 (332)
T ss_pred             CCHHHHHHHHH-HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             16467999998-85028810799886688889999998624455440478887653255316788635489999998458


Q ss_pred             CCCCCC
Q ss_conf             798756
Q gi|254780509|r  101 QRITLD  106 (112)
Q Consensus       101 ggiGL~  106 (112)
T Consensus        82 ~GiGLA   87 (332)
T TIGR02541        82 KGIGLA   87 (332)
T ss_pred             CCCCHH
T ss_conf             997689

; GO: 0016798 hydrolase activity acting on glycosyl bonds, 0001539 ciliary or flagellar motility, 0009296 flagellum biogenesis, 0009288 flagellin-based flagellum.

Probab=99.88  E-value=1.2e-22  Score=143.93  Aligned_cols=92  Identities=12%  Similarity=0.209  Sum_probs=76.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf             61135543336887544323120789999987022855479999999999999999999951021123357533368999
Q gi|254780509|r    8 NISHSQSMGGNLAKISQDDSSFQSFLQLKDVQEACDKSKSVPEMTQKLQGIMFQYFIKSILPEETVKSLGGGFNGDFWQE   87 (112)
Q Consensus         8 ~is~~~~M~gnla~is~~~~s~q~~~~Lk~~~~~~~~~~~l~~~a~~fEa~fl~~~lksmr~~~~~~~lggg~a~d~~~s   87 (112)
T Consensus         5 ~~~~~~dls~------~~a~D~~~l~~Lk~~a~~~~~~~al~~va~qFEalF~q~mlKsMR~a~~~~~~~~s~~~~~y~~   78 (344)
T PRK12712          5 TLSAQADLSQ------RFALDTQGFEALKHSARGGADAGTLQAAARQFEAVFTQMVLKSMRDATPQDGLFDNEQSKLYMS   78 (344)
T ss_pred             CCCCCCCHHH------HHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf             8786433034------5562677799999998539817899999999999999999999984677788878716789999


Q ss_pred             HHHHHHHHHHHHCCCCCCC
Q ss_conf             9999999999980798756
Q gi|254780509|r   88 ILAENISDVIVKQQRITLD  106 (112)
Q Consensus        88 Ml~ee~a~~iAk~ggiGL~  106 (112)
T Consensus        79 m~DqQla~~ls~~-G~GLa   96 (344)
T PRK12712         79 MMDQQLAQQMSSR-GIGLA   96 (344)
T ss_pred             HHHHHHHHHHHHC-CCCHH
T ss_conf             9999999998546-88899

Probab=99.88  E-value=1.5e-22  Score=143.53  Aligned_cols=82  Identities=27%  Similarity=0.376  Sum_probs=72.7

Q ss_pred             HHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             432312078999998702285547999999999999999999995102---11233575333689999999999999980
Q gi|254780509|r   24 QDDSSFQSFLQLKDVQEACDKSKSVPEMTQKLQGIMFQYFIKSILPEE---TVKSLGGGFNGDFWQEILAENISDVIVKQ  100 (112)
Q Consensus        24 ~~~~s~q~~~~Lk~~~~~~~~~~~l~~~a~~fEa~fl~~~lksmr~~~---~~~~lggg~a~d~~~sMl~ee~a~~iAk~  100 (112)
T Consensus         6 ~~~~D~~~L~~Lk~-~A~~~~~~al~~vA~QFEalF~qmmLKsMR~A~~~~~~~~~~~s~~~~~y~~M~DqQlA~~ls~~   84 (291)
T PRK12710          6 IATSDFQGLNELKI-QAKNNAKEALPEVAKQFEGIFLQSMLKSMRMGQHFLDESSPFSGKNEATFQEMLDAQYASTIAES   84 (291)
T ss_pred             HHHHCHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf             00415778999999-86229499999999999999999999998724466766898786167899999899999998428


Q ss_pred             CCCCCC
Q ss_conf             798756
Q gi|254780509|r  101 QRITLD  106 (112)
Q Consensus       101 ggiGL~  106 (112)
T Consensus        85 ~g~GLA   90 (291)
T PRK12710         85 KGIGLA   90 (291)
T ss_pred             CCCCHH
T ss_conf             998599

Probab=99.87  E-value=3.3e-22  Score=141.58  Aligned_cols=84  Identities=14%  Similarity=0.209  Sum_probs=73.2

Q ss_pred             HHHHHHHHCCHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             5443231207899999870-228554799999999999999999999510211233575333689999999999999980
Q gi|254780509|r   22 ISQDDSSFQSFLQLKDVQE-ACDKSKSVPEMTQKLQGIMFQYFIKSILPEETVKSLGGGFNGDFWQEILAENISDVIVKQ  100 (112)
Q Consensus        22 is~~~~s~q~~~~Lk~~~~-~~~~~~~l~~~a~~fEa~fl~~~lksmr~~~~~~~lggg~a~d~~~sMl~ee~a~~iAk~  100 (112)
T Consensus        12 ~q~~a~D~~~L~~Lk~~A~~~~~~~~~~r~vA~QFEalF~q~mlKsMR~a~~~~~l~~s~~~~~y~~m~DqQla~~ls~~   91 (339)
T PRK12713         12 VQESVFDLGRLADLKRDAVKAPDGQRQQTEVARQFEALFLQMMLKRMREATPKEGLFDSQQTEMLQGMADEQLALQLASP   91 (339)
T ss_pred             CCHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             31323066569999999851952567799999999999999999999846777888887177899999999999998346


Q ss_pred             CCCCCC
Q ss_conf             798756
Q gi|254780509|r  101 QRITLD  106 (112)
Q Consensus       101 ggiGL~  106 (112)
T Consensus        92 -G~Gla   96 (339)
T PRK12713         92 -GIGLA   96 (339)
T ss_pred             -CCCHH
T ss_conf             -87799

Probab=99.84  E-value=2.2e-21  Score=137.12  Aligned_cols=65  Identities=12%  Similarity=0.296  Sum_probs=59.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             228554799999999999999999999510211233575333689999999999999980798756
Q gi|254780509|r   41 ACDKSKSVPEMTQKLQGIMFQYFIKSILPEETVKSLGGGFNGDFWQEILAENISDVIVKQQRITLD  106 (112)
Q Consensus        41 ~~~~~~~l~~~a~~fEa~fl~~~lksmr~~~~~~~lggg~a~d~~~sMl~ee~a~~iAk~ggiGL~  106 (112)
T Consensus        14 ~kndpaaLr~VAqQFEslFvqMMLKSMRdAt~~d~l~ss~-sk~Y~~M~DQQLA~~LS~~gGiGLA   78 (392)
T PRK12711         14 TKADPAKIDKVSRQLEGQFAQMLVKSMRDASSGDPMFPGE-NQMFREMYDQQMAKALTDGKGLGLS   78 (392)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf             3299899999999999999999999997178889998624-4788889999999998658997199

Probab=99.83  E-value=1e-20  Score=133.46  Aligned_cols=68  Identities=9%  Similarity=0.243  Sum_probs=62.1

Q ss_pred             HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             7022855479999999999999999999951021123-3575333689999999999999980798756
Q gi|254780509|r   39 QEACDKSKSVPEMTQKLQGIMFQYFIKSILPEETVKS-LGGGFNGDFWQEILAENISDVIVKQQRITLD  106 (112)
Q Consensus        39 ~~~~~~~~~l~~~a~~fEa~fl~~~lksmr~~~~~~~-lggg~a~d~~~sMl~ee~a~~iAk~ggiGL~  106 (112)
T Consensus        31 kv~p~~~ak~k~tAqdFEA~FLn~Ml~~M~~gl~~dGpfG~g~ge~iwRSML~eeyak~iAkaGGIGIA   99 (115)
T PRK12790         31 KVSPQAQAKAKATATDFEAMFLNSMFSQMTSGLKGEGPFGDTVGTGVWRSMLTEQYSKSFAKAGGVGIS   99 (115)
T ss_pred             HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf             279367899999999999999999999998237778887898426689999999999999873886479

Probab=99.82  E-value=2.4e-20  Score=131.49  Aligned_cols=81  Identities=15%  Similarity=0.272  Sum_probs=73.6

Q ss_pred             HHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             323120789999987022855479999999999999999999951021123--357533368999999999999998079
Q gi|254780509|r   25 DDSSFQSFLQLKDVQEACDKSKSVPEMTQKLQGIMFQYFIKSILPEETVKS--LGGGFNGDFWQEILAENISDVIVKQQR  102 (112)
Q Consensus        25 ~~~s~q~~~~Lk~~~~~~~~~~~l~~~a~~fEa~fl~~~lksmr~~~~~~~--lggg~a~d~~~sMl~ee~a~~iAk~gg  102 (112)
T Consensus         9 ~~~daq~l~~lk~-~a~~d~~~~l~~~ArqfE~vFv~mMLKSMR~Al~~~~~dl~~S~q~rlY~dmyDqqlaqqlss~~g   87 (166)
T COG3951           9 SAWDAQSLNELKQ-GARRDPAANLRQVARQFEGVFVQMMLKSMREALPKDGADLFNSQQTRLYTDMYDQQLAQQLSSQKG   87 (166)
T ss_pred             HHHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             7999987788764-110181778999999999999999999999872530300104226889999999999999972588


Q ss_pred             CCCC
Q ss_conf             8756
Q gi|254780509|r  103 ITLD  106 (112)
Q Consensus       103 iGL~  106 (112)
T Consensus        88 ~GLA   91 (166)
T COG3951          88 LGLA   91 (166)
T ss_pred             CCHH
T ss_conf             5489

Probab=99.77  E-value=5.8e-19  Score=123.90  Aligned_cols=82  Identities=11%  Similarity=0.161  Sum_probs=70.6

Q ss_pred             HHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             32312078999998702285547999999999999999999995102----11233575333689999999999999980
Q gi|254780509|r   25 DDSSFQSFLQLKDVQEACDKSKSVPEMTQKLQGIMFQYFIKSILPEE----TVKSLGGGFNGDFWQEILAENISDVIVKQ  100 (112)
Q Consensus        25 ~~~s~q~~~~Lk~~~~~~~~~~~l~~~a~~fEa~fl~~~lksmr~~~----~~~~lggg~a~d~~~sMl~ee~a~~iAk~  100 (112)
T Consensus         5 ~~~~yl~~~~~~~l~k~n~e~~al~~va~QFE~~F~q~mlksMR~A~dal~~eD~p~nS~~~~~YrdM~DqQLA~~LS~~   84 (134)
T PRK12708          5 NSSPYLPGLNAGDLIPQNLEQGALKLAAQQFEAQFLQTVLKQMRSASDVMADEDDPFNSKNQGMYRDFYDAELASRLSSQ   84 (134)
T ss_pred             CCCCHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             77520102777778660453779999999999999999999999865430456885430578899999999999999866


Q ss_pred             CCCCCC
Q ss_conf             798756
Q gi|254780509|r  101 QRITLD  106 (112)
Q Consensus       101 ggiGL~  106 (112)
T Consensus        85 gg~GLA   90 (134)
T PRK12708         85 RSMGLA   90 (134)
T ss_pred             CCCCHH
T ss_conf             896499

Probab=99.00  E-value=2.2e-10  Score=77.04  Aligned_cols=42  Identities=24%  Similarity=0.394  Sum_probs=37.1

Q ss_pred             HHHHHCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             9995102112335-75333689999999999999980798756
Q gi|254780509|r   65 KSILPEETVKSLG-GGFNGDFWQEILAENISDVIVKQQRITLD  106 (112)
Q Consensus        65 ksmr~~~~~~~lg-gg~a~d~~~sMl~ee~a~~iAk~ggiGL~  106 (112)
T Consensus         1 ksMr~t~~~~~~~~~~~~~~~~~~m~d~q~a~~~a~~ggiGLA   43 (49)
T pfam10135         1 KSMRKAVPKDGLFGSGFAEDMFRSMLDQQLAKQLAKRGGIGLA   43 (49)
T ss_pred             CCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf             9455358776887885399999999999999999876998699

Members of this family are involved in the assembly of the prokaryotic flagellar rod.