254780659
hypothetical protein CLIBASIA_02730
GeneID in NCBI database: | 8209662 | Locus tag: | CLIBASIA_02730 |
Protein GI in NCBI database: | 254780659 | Protein Accession: | YP_003065072.1 |
Gene range: | -(613560, 614384) | Protein Length: | 274aa |
Gene description: | hypothetical protein | ||
COG prediction: | [S] Uncharacterized protein conserved in bacteria | ||
KEGG prediction: | hypothetical protein; K09769 hypothetical protein | ||
SEED prediction: | FIG006542: Phosphoesterase | ||
Pathway involved in KEGG: | not defined | ||
Subsystem involved in SEED: | - none - | ||
sequence | sequence profile |
Prediction of Local Sequence Properties
Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
No hits with e-value below 0.05
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
Identity | Alignment graph | Length | Definition | Round | E-value |
Target | 274 | hypothetical protein CLIBASIA_02730 [Candidatus Liberib | |||
315122157 | 274 | hypothetical protein CKC_02035 [Candidatus Liberibacter | 1 | 1e-144 | |
222149682 | 274 | hypothetical protein Avi_3650 [Agrobacterium vitis S4] | 1 | 1e-120 | |
241206195 | 274 | metallophosphoesterase [Rhizobium leguminosarum bv. tri | 1 | 1e-119 | |
15891218 | 274 | hypothetical protein Atu3730 [Agrobacterium tumefaciens | 1 | 1e-119 | |
332716460 | 274 | hypothetical protein AGROH133_12043 [Agrobacterium sp. | 1 | 1e-119 | |
190893285 | 274 | phosphatase [Rhizobium etli CIAT 652] Length = 274 | 1 | 1e-119 | |
116253719 | 274 | phosphatase [Rhizobium leguminosarum bv. viciae 3841] L | 1 | 1e-118 | |
150397843 | 274 | metallophosphoesterase [Sinorhizobium medicae WSM419] L | 1 | 1e-118 | |
222086994 | 274 | hypothetical protein Arad_3706 [Agrobacterium radiobact | 1 | 1e-118 | |
327194137 | 274 | metallophosphoesterase [Rhizobium etli CNPAF512] Length | 1 | 1e-118 |
>gi|315122157|ref|YP_004062646.1| hypothetical protein CKC_02035 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 274 | Back alignment and organism information |
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Score = 514 bits (1323), Expect = e-144, Method: Compositional matrix adjust. Identities = 243/274 (88%), Positives = 259/274 (94%) Query: 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGI 60 MRLLFLGDIVGK GRSIVY+ LPRLIRDF+LDFV+ANGENSAGGFGITEKIF EM+E GI Sbjct: 1 MRLLFLGDIVGKAGRSIVYDTLPRLIRDFKLDFVVANGENSAGGFGITEKIFLEMIEIGI 60 Query: 61 DVITTGNHVWDKREALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRV 120 DVITTGNH WDKREAL+FSQRH FLRPANYP +TPGNGSGLY AKNG+NVLV+NIMGR+ Sbjct: 61 DVITTGNHSWDKREALIFSQRHHHFLRPANYPLDTPGNGSGLYKAKNGANVLVSNIMGRI 120 Query: 121 FMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVVGTHT 180 FMNP+LDDPFRT+DKIL TCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVVGTHT Sbjct: 121 FMNPILDDPFRTSDKILETCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVVGTHT 180 Query: 181 HIPTADAQILDGGTGYITDLGMCGDYNSSIGLDKEEPINRFITQIPRNRFVIANGPATLC 240 HIPTADAQILDGGTGYI+DLGMCGDYNSSIGLDKEEPINRFI+QIP NRFV+ANGPATLC Sbjct: 181 HIPTADAQILDGGTGYISDLGMCGDYNSSIGLDKEEPINRFISQIPHNRFVVANGPATLC 240 Query: 241 GICAEISDVTGLAEKIAPIRIGPRLSETRPDFWT 274 GICA+ISDVTGL EKIAPIRIG RL +T PDFWT Sbjct: 241 GICADISDVTGLTEKIAPIRIGARLQQTSPDFWT 274 |
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|222149682|ref|YP_002550639.1| hypothetical protein Avi_3650 [Agrobacterium vitis S4] Length = 274 | Back alignment and organism information |
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>gi|241206195|ref|YP_002977291.1| metallophosphoesterase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 274 | Back alignment and organism information |
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>gi|15891218|ref|NP_356890.1| hypothetical protein Atu3730 [Agrobacterium tumefaciens str. C58] Length = 274 | Back alignment and organism information |
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>gi|332716460|ref|YP_004443926.1| hypothetical protein AGROH133_12043 [Agrobacterium sp. H13-3] Length = 274 | Back alignment and organism information |
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>gi|190893285|ref|YP_001979827.1| phosphatase [Rhizobium etli CIAT 652] Length = 274 | Back alignment and organism information |
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>gi|116253719|ref|YP_769557.1| phosphatase [Rhizobium leguminosarum bv. viciae 3841] Length = 274 | Back alignment and organism information |
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>gi|150397843|ref|YP_001328310.1| metallophosphoesterase [Sinorhizobium medicae WSM419] Length = 274 | Back alignment and organism information |
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>gi|222086994|ref|YP_002545528.1| hypothetical protein Arad_3706 [Agrobacterium radiobacter K84] Length = 274 | Back alignment and organism information |
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>gi|327194137|gb|EGE61007.1| metallophosphoesterase [Rhizobium etli CNPAF512] Length = 274 | Back alignment and organism information |
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Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
Identity | Alignment graph | Length | Definition | E-value |
Target | 274 | hypothetical protein CLIBASIA_02730 [Candidatus Liberib | ||
COG1692 | 266 | COG1692, COG1692, Uncharacterized protein conserved in | 1e-106 | |
TIGR00282 | 266 | TIGR00282, TIGR00282, metallophosphoesterase, MG_246/BB | 1e-70 | |
cd07382 | 255 | cd07382, MPP_DR1281, Deinococcus radiodurans DR1281 and | 1e-112 | |
pfam00149 | 186 | pfam00149, Metallophos, Calcineurin-like phosphoesteras | 5e-07 | |
pfam09587 | 237 | pfam09587, PGA_cap, Bacterial capsule synthesis protein | 2e-05 | |
smart00854 | 239 | smart00854, PGA_cap, Bacterial capsule synthesis protei | 2e-05 | |
cd07381 | 239 | cd07381, MPP_CapA, CapA and related proteins, metalloph | 2e-04 |
>gnl|CDD|31878 COG1692, COG1692, Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
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>gnl|CDD|161802 TIGR00282, TIGR00282, metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
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>gnl|CDD|163625 cd07382, MPP_DR1281, Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
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>gnl|CDD|143917 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
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>gnl|CDD|150300 pfam09587, PGA_cap, Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
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>gnl|CDD|129087 smart00854, PGA_cap, Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
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>gnl|CDD|163624 cd07381, MPP_CapA, CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
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Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
Identity | Alignment graph | Length | Definition | Probability |
Target | 274 | hypothetical protein CLIBASIA_02730 [Candidatus Liberib | ||
COG1692 | 266 | Calcineurin-like phosphoesterase [General function pred | 100.0 | |
TIGR00282 | 272 | TIGR00282 conserved hypothetical protein TIGR00282; Int | 100.0 | |
PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase p | 99.11 | |
pfam09587 | 237 | PGA_cap Bacterial capsule synthesis protein PGA_cap. Th | 99.09 | |
smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_cap. Th | 99.09 | |
PRK09419 | 1260 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiestera | 98.66 | |
pfam00149 | 186 | Metallophos Calcineurin-like phosphoesterase. This fami | 98.24 | |
PRK09419 | 1260 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiestera | 97.54 | |
TIGR01530 | 550 | nadN NAD nucleotidase; InterPro: IPR006420 This family | 96.47 | |
PRK11340 | 270 | phosphodiesterase YaeI; Provisional | 90.02 | |
COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and | 98.7 | |
PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiestera | 97.18 | |
KOG4419 | 602 | consensus | 97.01 | |
PRK09420 | 578 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.51 | |
PRK11907 | 810 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiestera | 95.66 | |
PRK02083 | 253 | imidazole glycerol phosphate synthase subunit HisF; Pro | 93.2 | |
TIGR03572 | 232 | WbuZ glycosyl amidation-associated protein WbuZ. This c | 91.01 | |
PRK02621 | 254 | consensus | 90.87 | |
PRK05581 | 220 | ribulose-phosphate 3-epimerase; Validated | 92.67 | |
PRK08091 | 235 | ribulose-phosphate 3-epimerase; Validated | 92.0 | |
PRK08005 | 210 | ribulose-phosphate 3-epimerase; Validated | 90.58 | |
PRK09722 | 227 | allulose-6-phosphate 3-epimerase; Provisional | 90.01 |
>COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
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>TIGR00282 TIGR00282 conserved hypothetical protein TIGR00282; InterPro: IPR005235 This family of conserved hypothetical proteins has no known function | Back alignment and domain information |
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>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
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>pfam09587 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
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>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
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>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
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>pfam00149 Metallophos Calcineurin-like phosphoesterase | Back alignment and domain information |
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>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
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>TIGR01530 nadN NAD nucleotidase; InterPro: IPR006420 This family describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria | Back alignment and domain information |
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>PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
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>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
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>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
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>KOG4419 consensus | Back alignment and domain information |
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>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
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>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
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>PRK02083 imidazole glycerol phosphate synthase subunit HisF; Provisional | Back alignment and domain information |
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>TIGR03572 WbuZ glycosyl amidation-associated protein WbuZ | Back alignment and domain information |
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>PRK02621 consensus | Back alignment and domain information |
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>PRK05581 ribulose-phosphate 3-epimerase; Validated | Back alignment and domain information |
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>PRK08091 ribulose-phosphate 3-epimerase; Validated | Back alignment and domain information |
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>PRK08005 ribulose-phosphate 3-epimerase; Validated | Back alignment and domain information |
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>PRK09722 allulose-6-phosphate 3-epimerase; Provisional | Back alignment and domain information |
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Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch
Homologous Structures Detected by PSI-BLAST against Nonredundant Database
Identity | Alignment graph | Length | Definition | E-value |
Target | 274 | hypothetical protein CLIBASIA_02730 [Candidatus Liberib | ||
1t70_A | 255 | Crystal Structure Of A Novel Phosphatase From Deino | 1e-69 | |
2z06_A | 252 | Crystal Structure Of Uncharacterized Conserved Prot | 2e-69 | |
1t71_A | 281 | Crystal Structure Of A Novel Phosphatase Mycoplasma | 7e-64 | |
2cv9_A | 252 | Crystal Structure Of A Hypothetical Protein From Th | 1e-63 |
gi|58176742|pdb|1T70|A Chain A, Crystal Structure Of A Novel Phosphatase From Deinococcus Radiodurans Length = 255 | Back alignment and structure |
Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 106/263 (40%), Positives = 142/263 (53%), Gaps = 13/263 (4%) Query: 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGI 60 MR+LF+GD+ G+ GR ++ LP + F DFVI N ENSAGGFG+ +E G Sbjct: 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF--DFVIVNMENSAGGFGMHRDAARGALEAGA 58 Query: 61 DVITTGNHVWDKREALVFSQRHCK-FLRPANYP-PNTPGNGSGLYCAKNGSNVLVANIMG 118 +T GNH W ++ +RP NY P TPG G + NG + V N++G Sbjct: 59 GCLTLGNHAWHHKDIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFD-VNGEKLTVVNLLG 117 Query: 119 RVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVVGT 178 RVFM +D+PFRT D +L L + DFHAE TSEK+ + R + V+GT Sbjct: 118 RVFME-AVDNPFRTMDALLERDDLGT----VFVDFHAEATSEKEAMGWHLAGRVAAVIGT 172 Query: 179 HTHIPTADAQILDGGTGYITDLGMCGDYNSSIGLDKEEPINRFITQIPRNRFVIANGPAT 238 HTH+PTAD +IL GGT Y TD G G ++S IG E P+ RF+T+ P +R+ +A G A Sbjct: 173 HTHVPTADTRILKGGTAYQTDAGFTGPHDSIIGSAIEGPLQRFLTERP-HRYGVAEGRAE 231 Query: 239 LCGICAEISDVTGLAEKIAPIRI 261 L G+ G A R Sbjct: 232 LNGVALHF--EGGKATAAERYRF 252 |
gi|160286297|pdb|2Z06|A Chain A, Crystal Structure Of Uncharacterized Conserved Protein From Thermus Thermophilus Length = 252 | Back alignment and structure |
gi|58176750|pdb|1T71|A Chain A, Crystal Structure Of A Novel Phosphatase Mycoplasma Pneumoniaefrom Length = 281 | Back alignment and structure |
>gi|83754884|pdb|2CV9|A Chain A, Crystal Structure Of A Hypothetical Protein From Thermus Thermophilus Hb8 Length = 252 | Back alignment and structure |
Homologous Structures in PDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 274 | hypothetical protein CLIBASIA_02730 [Candidatus Liberib | ||
1t71_A | 281 | Phosphatase, conserved; crystal, X-RAY crystallography, | 1e-80 | |
2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal bindin | 7e-78 | |
1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, structural | 2e-77 |
>1t71_A Phosphatase, conserved; crystal, X-RAY crystallography, structural genomics, berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 Length = 281 | Back alignment and structure |
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Score = 294 bits (754), Expect = 1e-80 Identities = 87/266 (32%), Positives = 132/266 (49%), Gaps = 10/266 (3%) Query: 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGI 60 ++ +FLGD+ GK GR+I+ L +L +Q D VI N EN+ G G++ K + + E G+ Sbjct: 5 IKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGV 64 Query: 61 DVITTGNHVWDKREALVFSQRHCKFLRPANYPPN----TPGNGSGLYCAKNGSNVLVANI 116 + IT GNH W ++ L +RP N + G GS ++ + + Sbjct: 65 NYITMGNHTWFQKLDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLL 124 Query: 117 MGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVV 176 V + +PF+ +++ K D+ + DFHAETTSEK F D + + Sbjct: 125 GTSVPLPFKTTNPFKVLKELIL----KRDCDLHIVDFHAETTSEKNAFCMAFDGYVTTIF 180 Query: 177 GTHTHIPTADAQILDGGTGYITDLGMCGD-YNSSIGLDKEEPINRFITQIPRNRFVIANG 235 GTHTH+P+AD +I G+ YITD+GMCG + S IG + E+ I F F ++ Sbjct: 181 GTHTHVPSADLRITPKGSAYITDVGMCGPGFGSVIGANPEQSIRLFCAGSRE-HFEVSKC 239 Query: 236 PATLCGICAEISDVTGLAEKIAPIRI 261 A L G+ E+ T K IRI Sbjct: 240 GAQLNGVFFEVDVNTKKVIKTEAIRI 265 |
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus HB8} SCOP: d.159.1.10 PDB: 2cv9_A Length = 252 | Back alignment and structure |
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>1t70_A Phosphatase; crystal, X-RAY crystallography, structural genomics, berkeley structural genomics center, BSGC, PSI; 2.30A {Deinococcus radiodurans R1} SCOP: d.159.1.9 Length = 255 | Back alignment and structure |
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Homologous Structures in PDB70 Database Detected by HHsearch
Original result of HHsearch against PDB70 database
Identity | Alignment graph | Length | Definition | Probability |
Target | 274 | hypothetical protein CLIBASIA_02730 [Candidatus Liberib | ||
1t71_A | 281 | Phosphatase, conserved; crystal, X-RAY crystallography, | 100.0 | |
1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, structural | 100.0 | |
2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal bindin | 100.0 | |
3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein struc | 98.91 | |
2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding, hyd | 98.9 | |
3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, structura | 98.86 | |
1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, metallo | 98.85 | |
3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protei | 98.8 | |
3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleo | 98.65 | |
2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydr | 98.61 | |
1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent phosphat | 96.62 | |
1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nucleas | 96.49 | |
1ute_A | 313 | Protein (II purple acid phosphatase); tartrate resistan | 95.72 | |
2q8u_A | 336 | Exonuclease, putative; structural genomics, joint cente | 94.78 | |
1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2 | 94.52 | |
3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metallohydr | 90.61 | |
2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A homolog | 90.24 | |
1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break repair, | 94.63 | |
1su1_A | 208 | Hypothetical protein YFCE; structural genomics, phospho | 94.31 | |
2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, unkn | 93.35 | |
2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative diaden | 92.99 | |
2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal center ph | 92.19 | |
2fli_A | 220 | Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D | 92.34 | |
2iw0_A | 254 | Chitin deacetylase; hydrolase, chitin DE-N-acetylase, f | 90.22 |
>1t71_A Phosphatase, conserved; crystal, X-RAY crystallography, structural genomics, berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
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Probab=100.00 E-value=0 Score=809.52 Aligned_cols=264 Identities=34% Similarity=0.598 Sum_probs=253.9 Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH Q ss_conf 92699972027688999999808988860998999917004788678999999998379989993426530222047542 Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ 80 (274) Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~ 80 (274) |||||||||||+|||++|+++||+||++|++|||||||||||+|+|||+++|++|+++||||||+|||+|||||++++|+ T Consensus 5 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~iDfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~ 84 (281) T 1t71_A 5 IKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVNYITMGNHTWFQKLDLAVVI 84 (281) T ss_dssp CEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCCEEECCTTTTCCGGGHHHHT T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHH T ss_conf 36999980688889999999809999982899999898536789698999999999719989924721025635799885 Q ss_pred HCCCEEEECCCCC----CCCCCCEEEEECCCCCEEEEEEEEHHHCCCC-CCCCHHHHHHHHHHHCCCCCCCCEEEEECCC Q ss_conf 1893897500798----8875407999848992899999600005883-3259899999998634136899889996257 Q gi|254780659|r 81 RHCKFLRPANYPP----NTPGNGSGLYCAKNGSNVLVANIMGRVFMNP-LLDDPFRTADKILATCPLKEQADVIVFDFHA 155 (274) Q Consensus 81 ~~~~ilRP~N~p~----~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~-~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHa 155 (274) +++|||||+|||+ ++||+||.+++.. +.+++|+|||||+||.| .++|||+.++.++.+ .++++||||||| T Consensus 85 ~~~~ilRP~N~p~~~p~~~pG~G~~i~~~~-~~~i~Vinl~Gr~fm~~~~~~~pf~~~~~~~~~----~~~~~iiVDfHA 159 (281) T 1t71_A 85 NKKDLVRPLNLDTSFAFHNLGQGSLVFEFN-KAKIRITNLLGTSVPLPFKTTNPFKVLKELILK----RDCDLHIVDFHA 159 (281) T ss_dssp TCTTEECBSCBCTTSTTTTSSBSEEEEECS-SCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT----CCCSEEEEEEEC T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEECC-CCCEEEEEHHCCCCCCCCCCCCHHHHHHHHHHC----CCCCEEEEECCC T ss_conf 266431045455446788888757999516-742542101174356875456356777788753----479879997355 Q ss_pred CCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCC-HHHCCCCCHHHHHHHHHHCCCCCCCCCCC Q ss_conf 62289999997608957799806976246545640367289840560137-12103547467898885168865411157 Q gi|254780659|r 156 ETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGD-YNSSIGLDKEEPINRFITQIPRNRFVIAN 234 (274) Q Consensus 156 EaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~-~~SVIG~~~~~~i~rf~t~~p~~r~~~a~ 234 (274) ||||||+|||||||||||||+||||||||||+||||+|||||||+||||| |||||||+++++|+||++++|. ||++|+ T Consensus 160 EATSEK~Amg~~lDGrVsaVvGTHTHV~TaD~rILp~GTAyiTDvGMtG~~~dSVIG~~~e~~i~rf~t~~p~-rf~~a~ 238 (281) T 1t71_A 160 ETTSEKNAFCMAFDGYVTTIFGTHTHVPSADLRITPKGSAYITDVGMCGPGFGSVIGANPEQSIRLFCAGSRE-HFEVSK 238 (281) T ss_dssp SCHHHHHHHHHHHTTTSSEEEEESSSSCCTTCEECTTSCEEESCCCEEBCCTTSBTTBCHHHHHHHHTTCCCC-CCCBCC T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCC-CCCCCC T ss_conf 1178999999873698789985675622676647589819981486655886753254717899999718998-866689 Q ss_pred CCEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCC Q ss_conf 8719999999984799867467899876831657875349 Q gi|254780659|r 235 GPATLCGICAEISDVTGLAEKIAPIRIGPRLSETRPDFWT 274 (274) Q Consensus 235 g~~~l~gv~ieid~~tG~a~~I~ri~igg~L~e~~p~~~~ 274 (274) ++++|||++||+|++||||.+|+|||| .|..|.+|+ T Consensus 239 g~~~l~gv~i~id~~tgka~~Ieri~i----~ed~p~~~~ 274 (281) T 1t71_A 239 CGAQLNGVFFEVDVNTKKVIKTEAIRI----VEDDPRYLK 274 (281) T ss_dssp SCEEEEEEEEECCTTTCCCCEEEEEEE----EECCGGGTT T ss_pred CCCEEEEEEEEEECCCCCEEEEEEEEE----CCCCHHHHH T ss_conf 986899999998889897678999996----167704888 |
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural genomics, berkeley structural genomics center, BSGC, PSI; 2.30A {Deinococcus radiodurans R1} SCOP: d.159.1.9 | Back alignment and structure |
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>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus HB8} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
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>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
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>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus HB8} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
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>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
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>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
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>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein structure initiative, PSI-2; 1.90A {Candida albicans SC5314} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
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>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
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>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
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>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
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>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC structure funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
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>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase, metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
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>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} | Back alignment and structure |
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>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
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>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
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>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
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>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
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>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
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>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national project on protein structural and functional analyses; 1.60A {Aquifex aeolicus VF5} SCOP: d.159.1.6 | Back alignment and structure |
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>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
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>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
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>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2 | Back alignment and structure |
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>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate esterase; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3 | Back alignment and structure |
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Homologous Domains in SCOP and MMDB Database
Detected by RPS-BLAST and HHsearch
Homologous Domains in SCOP70 (Version1.75) Database Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
Identity | Alignment graph | Length | Definition | E-value |
274 | hypothetical protein CLIBASIA_02730 [Candidatus Liberib | |||
d1t71a_ | 281 | d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma | 1e-81 | |
d2z06a1 | 252 | d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {The | 6e-79 | |
d1t70a_ | 255 | d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus | 3e-78 |
>d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} Length = 281 | Back information, alignment and structure |
---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104] Score = 296 bits (759), Expect = 1e-81 Identities = 89/277 (32%), Positives = 135/277 (48%), Gaps = 14/277 (5%) Query: 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGI 60 ++ +FLGD+ GK GR+I+ L +L +Q D VI N EN+ G G++ K + + E G+ Sbjct: 5 IKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGV 64 Query: 61 DVITTGNHVWDKREALVFSQRHCKFLRPANYPPN----TPGNGSGLYCAKNGSNVLVANI 116 + IT GNH W ++ L +RP N + G GS ++ + + Sbjct: 65 NYITMGNHTWFQKLDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLL 124 Query: 117 MGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVV 176 V + +PF+ +++ K D+ + DFHAETTSEK F D + + Sbjct: 125 GTSVPLPFKTTNPFKVLKELIL----KRDCDLHIVDFHAETTSEKNAFCMAFDGYVTTIF 180 Query: 177 GTHTHIPTADAQILDGGTGYITDLGMCGD-YNSSIGLDKEEPINRFITQIPRNRFVIANG 235 GTHTH+P+AD +I G+ YITD+GMCG + S IG + E+ I F F ++ Sbjct: 181 GTHTHVPSADLRITPKGSAYITDVGMCGPGFGSVIGANPEQSIRLFCAGSRE-HFEVSKC 239 Query: 236 PATLCGICAEISDVTGLAEKIAPIRIGPRLSETRPDF 272 A L G+ E+ T K IRI E P + Sbjct: 240 GAQLNGVFFEVDVNTKKVIKTEAIRI----VEDDPRY 272 |
>d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} Length = 252 | Back information, alignment and structure |
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>d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} Length = 255 | Back information, alignment and structure |
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Homologous Domains in SCOP70 (Version 1.75) Database Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
Identity | Alignment graph | Length | Definition | Probability |
Target | 274 | hypothetical protein CLIBASIA_02730 [Candidatus Liberib | ||
d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae [Tax | 100.0 | |
d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilus [Ta | 100.0 | |
d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodurans [T | 100.0 | |
d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal | 98.96 | |
d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal | 98.88 | |
d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal | 98.77 | |
d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus jannas | 97.02 | |
d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {Kidney | 96.76 | |
d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus [TaxI | 95.55 | |
d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycobacteri | 94.84 | |
d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [ | 94.3 | |
d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | 95.24 | |
d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 93.34 |
>d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104] Probab=100.00 E-value=0 Score=808.25 Aligned_cols=263 Identities=35% Similarity=0.604 Sum_probs=250.9 Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH Q ss_conf 92699972027688999999808988860998999917004788678999999998379989993426530222047542 Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ 80 (274) Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~ 80 (274) |||||||||||+|||++|+++||+||++|++|||||||||||+|+|||+++|++|+++||||||+|||+|||||+++||+ T Consensus 5 MkILfiGDIvG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~Git~k~~~eL~~~GvDvIT~GNH~wd~kei~~~i~ 84 (281) T d1t71a_ 5 IKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVNYITMGNHTWFQKLDLAVVI 84 (281) T ss_dssp CEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCCEEECCTTTTCCGGGHHHHT T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEECCCHHHHCHHHHHHHH T ss_conf 46999971688889999999839999971999999887657899398999999999707867975724553314278776 Q ss_pred HCCCEEEECCCCC----CCCCCCEEEEECCCCCEEEEEEEEHHHCCCC-CCCCHHHHHHHHHHHCCCCCCCCEEEEECCC Q ss_conf 1893897500798----8875407999848992899999600005883-3259899999998634136899889996257 Q gi|254780659|r 81 RHCKFLRPANYPP----NTPGNGSGLYCAKNGSNVLVANIMGRVFMNP-LLDDPFRTADKILATCPLKEQADVIVFDFHA 155 (274) Q Consensus 81 ~~~~ilRP~N~p~----~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~-~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHa 155 (274) +++|||||+|||+ ++||+||.+++. ++.|++|+|||||+||.| .++|||..+++++.+ .++|+||||||| T Consensus 85 ~~~~llRP~N~p~~~p~~~pG~G~~i~~~-~~~~i~Vinl~G~~fm~~~~~~~pf~~~~~~~~~----~~~d~i~VDfHa 159 (281) T d1t71a_ 85 NKKDLVRPLNLDTSFAFHNLGQGSLVFEF-NKAKIRITNLLGTSVPLPFKTTNPFKVLKELILK----RDCDLHIVDFHA 159 (281) T ss_dssp TCTTEECBSCBCTTSTTTTSSBSEEEEEC-SSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT----CCCSEEEEEEEC T ss_pred HCCCCCCCCCCCCCCCCCCCCCEEEEEEC-CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCC----CCCCEEEEEECC T ss_conf 13433115544333567999742899971-6543320122164224444563788777776404----678769998035 Q ss_pred CCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCC-HHHCCCCCHHHHHHHHHHCCCCCCCCCCC Q ss_conf 62289999997608957799806976246545640367289840560137-12103547467898885168865411157 Q gi|254780659|r 156 ETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGD-YNSSIGLDKEEPINRFITQIPRNRFVIAN 234 (274) Q Consensus 156 EaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~-~~SVIG~~~~~~i~rf~t~~p~~r~~~a~ 234 (274) ||||||+|||||||||||||+||||||||||+||||+|||||||+||||| |||||||++|.+|+||++++|. ||++|+ T Consensus 160 EATSEK~A~g~~lDGrvsaVvGTHTHV~TaD~rILp~GTAyiTDvGMtG~~ydSVIG~~~e~~i~rf~t~~p~-rf~~a~ 238 (281) T d1t71a_ 160 ETTSEKNAFCMAFDGYVTTIFGTHTHVPSADLRITPKGSAYITDVGMCGPGFGSVIGANPEQSIRLFCAGSRE-HFEVSK 238 (281) T ss_dssp SCHHHHHHHHHHHTTTSSEEEEESSSSCCTTCEECTTSCEEESCCCEEBCCTTSBTTBCHHHHHHHHTTCCCC-CCCBCC T ss_pred CHHHHHHHHEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCC-CCCCCC T ss_conf 1066552330440796899982575441576401267728983575544766742044707899999718997-766789 Q ss_pred CCEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCC Q ss_conf 871999999998479986746789987683165787534 Q gi|254780659|r 235 GPATLCGICAEISDVTGLAEKIAPIRIGPRLSETRPDFW 273 (274) Q Consensus 235 g~~~l~gv~ieid~~tG~a~~I~ri~igg~L~e~~p~~~ 273 (274) ++++|||+++|+|++||+|++|+|||| .|..|.|. T Consensus 239 g~~~l~gv~i~id~~tg~a~~I~ri~i----~ed~p~~l 273 (281) T d1t71a_ 239 CGAQLNGVFFEVDVNTKKVIKTEAIRI----VEDDPRYL 273 (281) T ss_dssp SCEEEEEEEEECCTTTCCCCEEEEEEE----EECCGGGT T ss_pred CCCEEEEEEEEEECCCCCEEEEEEEEE----ECCCHHHH T ss_conf 987999999998889897368999997----05773478 |
>d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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>d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
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>d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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>d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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>d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
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>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
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>d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
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>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
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>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
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Homologous Domains in MMDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against MMDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 274 | hypothetical protein CLIBASIA_02730 [Candidatus Li | ||
1t71_A_ | 281 | (A:) Phosphatase, conserved; crystal, X-RAY crysta | 2e-38 | |
2z06_A_ | 252 | (A:) Putative uncharacterized protein TTHA0625; me | 9e-38 | |
1t70_A_ | 255 | (A:) Phosphatase; crystal, X-RAY crystallography, | 1e-36 |
>1t71_A (A:) Phosphatase, conserved; crystal, X-RAY crystallography, structural genomics, berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129}Length = 281 | Back alignment and structure |
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Score = 153 bits (387), Expect = 2e-38 Identities = 88/278 (31%), Positives = 134/278 (48%), Gaps = 10/278 (3%) Query: 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGI 60 ++ +FLGD+ GK GR+I+ L +L +Q D VI N EN+ G G++ K + + E G+ Sbjct: 5 IKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGV 64 Query: 61 DVITTGNHVWDKREALVFSQRHCKFLRPANYPPNTPGNGSG---LYCAKNGSNVLVANIM 117 + IT GNH W ++ L +RP N + + G L N + + + N++ Sbjct: 65 NYITMGNHTWFQKLDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLL 124 Query: 118 GRVFMNPL-LDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVV 176 G P +PF+ +++ D+ + DFHAETTSEK F D + + Sbjct: 125 GTSVPLPFKTTNPFKVLKELILKRD----CDLHIVDFHAETTSEKNAFCMAFDGYVTTIF 180 Query: 177 GTHTHIPTADAQILDGGTGYITDLGMCGDY-NSSIGLDKEEPINRFITQIPRNRFVIANG 235 GTHTH+P+AD +I G+ YITD+GMCG S IG + E+ I F F ++ Sbjct: 181 GTHTHVPSADLRITPKGSAYITDVGMCGPGFGSVIGANPEQSIRLFCAGSRE-HFEVSKC 239 Query: 236 PATLCGICAEISDVTGLAEKIAPIRIGPRLSETRPDFW 273 A L G+ E+ T K IRI + Sbjct: 240 GAQLNGVFFEVDVNTKKVIKTEAIRIVEDDPRYLKQDY 277 |
>2z06_A (A:) Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus HB8}Length = 252 | Back alignment and structure |
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>1t70_A (A:) Phosphatase; crystal, X-RAY crystallography, structural genomics, berkeley structural genomics center, BSGC, PSI; 2.30A {Deinococcus radiodurans R1}Length = 255 | Back alignment and structure |
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Homologous Domains in MMDB70 Database Detected by HHsearch
Original result of HHsearch against MMDB70 database
Identity | Alignment graph | Length | Definition | Probability |
Target | 274 | hypothetical protein CLIBASIA_02730 [Candidatus Liberib | ||
1t70_A_ | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 99.97 | |
1t71_A_ | 281 | Phosphatase, conserved; crystal, X-RAY crystallogr | 99.97 | |
2z06_A_ | 252 | Putative uncharacterized protein TTHA0625; metal b | 99.97 | |
3ib7_A_23-284 | 262 | ICC protein; metallophosphoesterase, alpha-beta fo | 97.19 | |
1ute_A_ | 313 | Protein (II purple acid phosphatase); tartrate res | 96.33 | |
1hp1_A_1-327 | 327 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.99 | |
3ive_A_1-307 | 307 | Nucleotidase; structural genomics, PSI-2, protein | 98.99 | |
2z1a_A_1-327 | 327 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.89 | |
3c9f_A_1-326 | 326 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.81 | |
3jyf_A_ | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 98.78 | |
3gve_A_ | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.68 | |
2wdc_A_1-358 | 358 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.35 | |
1ii7_A_ | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 97.84 | |
2q8u_A_1-281 | 281 | Exonuclease, putative; TM1635, structural genomics | 96.92 | |
1xzw_A_122-426 | 305 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 96.58 | |
1uf3_A_ | 228 | Hypothetical protein TT1561; metallo-dependent pho | 96.3 | |
2qfp_A_115-424 | 310 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 95.73 | |
3d03_A_1-98_224-274 | 149 | Phosphohydrolase; glycerophosphodiesterase, metall | 94.47 | |
1s3l_A_ | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 91.46 | |
2nxf_A_1-117_290-322 | 150 | Putative dimetal phosphatase; dinuclear metal cent | 91.12 |
>1t70_A (A:) Phosphatase; crystal, X-RAY crystallography, structural genomics, berkeley structural genomics center, BSGC, PSI; 2.30A {Deinococcus radiodurans R1} | Back alignment and structure |
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Probab=99.97 E-value=8.9e-29 Score=206.95 Aligned_cols=250 Identities=40% Similarity=0.699 Sum_probs=233.0 Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH Q ss_conf 92699972027688999999808988860998999917004788678999999998379989993426530222047542 Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ 80 (274) Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~ 80 (274) |+||+++|+.|+.|...+...+.++|++. |.+++|+|+.-.|.++....++.|.++|.|+.|.|||-||..++..+++ T Consensus 1 l~il~~~Dih~~~g~~~~~~~i~~~~~~~--d~l~v~~GD~~~g~~~~~~~~~~l~~~g~d~~~~GNHe~d~g~l~~~l~ 78 (255) T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF--DFVIVNMENSAGGFGMHRDAARGALEAGAGCLTLGNHAWHHKDIYPMLS 78 (255) T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC--SEEEEECTBTTTTSSCCHHHHHHHHHHTCSEEECCTTTTSSTTHHHHHH T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHHC--CEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHCHHHHHHHH T ss_conf 92999960789889999998708878609--8999998667888589999999999757867973605542423689986 Q ss_pred HCCCEEEECCC--CCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCH Q ss_conf 18938975007--9888754079998489928999996000058833259899999998634136899889996257622 Q gi|254780659|r 81 RHCKFLRPANY--PPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETT 158 (274) Q Consensus 81 ~~~~ilRP~N~--p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaT 158 (274) +.++-...+|. ....+...|.+++ .+|.|++++.+.+..+..+ .+.+.+.+++++++ .++|.+++-+|.-.. T Consensus 79 ~~~~~~l~~n~~~~~~~~~~~~~i~~-~~g~ki~~~g~~~~~~~~~-~~~~~~~~~~~~~~----~~~D~vI~l~H~g~~ 152 (255) T 1t70_A 79 EDTYPIVRPLNYADPGTPGVGWRTFD-VNGEKLTVVNLLGRVFMEA-VDNPFRTMDALLER----DDLGTVFVDFHAEAT 152 (255) T ss_dssp TTCSCEECCSCCCCTTCSSCSEEEEE-CSSSEEEEEEEECCTTSCC-CSCHHHHHHHHTTC----SSCCEEEEEEECSCH T ss_pred HCCCCCCCHHCCCCCCCCCCEEEEEE-ECCCCEEEEEECCEECCCC-CCCHHHHHHHHHHH----CCCCEEEEECCCHHH T ss_conf 30312363210777789985089995-0656399999705442676-66879999999864----568849999034048 Q ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEE Q ss_conf 89999997608957799806976246545640367289840560137121035474678988851688654111578719 Q gi|254780659|r 159 SEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGDYNSSIGLDKEEPINRFITQIPRNRFVIANGPAT 238 (274) Q Consensus 159 SEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~~~SVIG~~~~~~i~rf~t~~p~~r~~~a~g~~~ 238 (274) .+..++..+++..|.+|+|.|||+++..+.+.+++..|.+..|..|.+.+.++...+....+++..+.. .|........ T Consensus 153 ~~~~~~~~~~~~gvDlilggH~H~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~ 231 (255) T 1t70_A 153 SEKEAMGWHLAGRVAAVIGTHTHVPTADTRILKGGTAYQTDAGFTGPHDSIIGSAIEGPLQRFLTERPH-RYGVAEGRAE 231 (255) T ss_dssp HHHHHHHHHHTTSSSEEEEESSCSCBSCCEEETTTEEEESCCCCBEESSSBTTBCSHHHHHHHHHCSCC-CCCBCCSCEE T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCCCEECCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCC-CCCCCCCCCE T ss_conf 778888842348679998568553255326737785898248552053551376738899999718998-8756799879 Q ss_pred EEEEEEEEECCCCCEEEEEEEEE Q ss_conf 99999998479986746789987 Q gi|254780659|r 239 LCGICAEISDVTGLAEKIAPIRI 261 (274) Q Consensus 239 l~gv~ieid~~tG~a~~I~ri~i 261 (274) ++++.+++|+. .+..++++|. T Consensus 232 ~~~~~i~~d~~--~~~~~~~~~~ 252 (255) T 1t70_A 232 LNGVALHFEGG--KATAAERYRF 252 (255) T ss_dssp EEEEEEEEETT--EEEEEEEEEE T ss_pred EEEEEEEECCC--CEEEEEEEEE T ss_conf 99999997799--7898899994 |
>1t71_A (A:) Phosphatase, conserved; crystal, X-RAY crystallography, structural genomics, berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} | Back alignment and structure |
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>2z06_A (A:) Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus HB8} | Back alignment and structure |
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>3ib7_A (A:23-284) ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, hydrolase; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
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>1ute_A (A:) Protein (II purple acid phosphatase); tartrate resistant acid phosphatase, metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} | Back alignment and structure |
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>1hp1_A (A:1-327) 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} | Back alignment and structure |
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>3ive_A (A:1-307) Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
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>2z1a_A (A:1-327) 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus HB8} | Back alignment and structure |
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>3c9f_A (A:1-326) 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein structure initiative, PSI-2; 1.90A {Candida albicans SC5314} | Back alignment and structure |
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>3jyf_A (A:) 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
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>3gve_A (A:) YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
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>2wdc_A (A:1-358) SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
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>1ii7_A (A:) MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} | Back alignment and structure |
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>2q8u_A (A:1-281) Exonuclease, putative; TM1635, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.20A {Thermotoga maritima MSB8} | Back alignment and structure |
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>1xzw_A (A:122-426) Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} | Back alignment and structure |
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>1uf3_A (A:) Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} | Back alignment and structure |
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>2qfp_A (A:115-424) Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} | Back alignment and structure |
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>3d03_A (A:1-98,A:224-274) Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} | Back alignment and structure |
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>1s3l_A (A:) Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC structure funded by NIH; 2.40A {Methanocaldococcus jannaschii} | Back alignment and structure |
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>2nxf_A (A:1-117,A:290-322) Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} | Back alignment and structure |
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