254780749

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 58/93 (62%), Positives = 75/93 (80%)

Query: 1   MLSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVI 60
           MLSN+SP I++SIRILI +FI FIW K+ +    FD+GYILI  GA+GN++DH LYGYVI
Sbjct: 57  MLSNISPKIIISIRILITSFIVFIWMKSARKNFAFDMGYILIIAGAVGNIIDHYLYGYVI 116

Query: 61  DYIMIHTQTWSFAVFNLADLFISIGTCIIIYDD 93
           DY+M+ TQ WSFA+FNLAD  IS+G CI+I ++
Sbjct: 117 DYVMLRTQVWSFAIFNLADFLISLGACILICNE 149

Species: Candidatus Liberibacter solanacearum
Genus: Candidatus Liberibacter
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 71/101 (70%)

Query: 1   MLSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVI 60
           MLS +    +V +R+ ++AF+ ++W++ PK +    +GY +I  GALGN+VD  L+GYVI
Sbjct: 62  MLSGMEGWFIVGMRLAVVAFVLWLWRRTPKDRFFAHLGYAMIIAGALGNLVDRLLFGYVI 121

Query: 61  DYIMIHTQTWSFAVFNLADLFISIGTCIIIYDDIILQHRQK 101
           DYI+ HT TWSFAVFNLAD FI++G   II D+++   + +
Sbjct: 122 DYILFHTATWSFAVFNLADSFITVGAGAIILDELLQTKKTR 162

Species: Sinorhizobium fredii
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 71/101 (70%)

Query: 1   MLSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVI 60
           MLS +    +V IR+ ++ F+ ++W++ PK +    +GY +I  GALGN+VD  L+GYVI
Sbjct: 62  MLSGIEGWFIVGIRLAVVTFVLWLWRRTPKDRFFAHLGYAMIIAGALGNLVDRLLFGYVI 121

Query: 61  DYIMIHTQTWSFAVFNLADLFISIGTCIIIYDDIILQHRQK 101
           DYI+ +T TWSFAVFNLAD FI++G   II D+++   +++
Sbjct: 122 DYILFYTATWSFAVFNLADSFITVGAGAIILDELLQAKKER 162

Species: Sinorhizobium meliloti
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  108 bits (270), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 71/101 (70%)

Query: 1   MLSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVI 60
           MLS +    +V IR+ ++ F+ ++W++ PK +    +GY +I  GALGN+VD  L+GYVI
Sbjct: 62  MLSGMEGWFIVGIRLAVVTFVLWLWRRTPKDRFFAHLGYAMIIAGALGNLVDRLLFGYVI 121

Query: 61  DYIMIHTQTWSFAVFNLADLFISIGTCIIIYDDIILQHRQK 101
           DYI+ +T TWSFAVFNLAD FI++G   II D+++   +++
Sbjct: 122 DYILFYTATWSFAVFNLADSFITVGAGAIILDELLQAKKER 162

Species: Sinorhizobium meliloti
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 71/101 (70%)

Query: 1   MLSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVI 60
           MLS +    +V IR+ ++ F+ ++W++ PK +    +GY +I  GALGN+VD  L+GYVI
Sbjct: 61  MLSGMEGWFIVGIRLGVVTFVLWLWRRTPKDRFFAHLGYAMIIAGALGNLVDRLLFGYVI 120

Query: 61  DYIMIHTQTWSFAVFNLADLFISIGTCIIIYDDIILQHRQK 101
           DYI+ +T TWSFAVFNLAD FI++G   II D+++   +++
Sbjct: 121 DYILFYTATWSFAVFNLADSFITVGAGAIILDELLQAKKER 161

Species: Sinorhizobium medicae
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 72/101 (71%)

Query: 1   MLSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVI 60
           +L ++  T L+ +  ++I F+ F+W + P  +SI  +G+ LI  GALGN+VD  +YG+V+
Sbjct: 60  LLKDLPDTGLLMLTAMVIVFVIFLWWRTPSDRSIAHLGFALIIGGALGNLVDRAIYGHVV 119

Query: 61  DYIMIHTQTWSFAVFNLADLFISIGTCIIIYDDIILQHRQK 101
           DYI+ +T TWSFAVFNLAD FISIG  +I+ D++I   R++
Sbjct: 120 DYILFYTSTWSFAVFNLADSFISIGAGLIVLDEVIAALRER 160

Species: Hoeflea phototrophica
Genus: Hoeflea
Family: Phyllobacteriaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 71/95 (74%)

Query: 1   MLSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVI 60
           MLS +    +V +R++I+AF+ ++W++ P  + I  +G+ LI  GALGN++D  LYG+VI
Sbjct: 71  MLSGMDGWFIVGMRLVIVAFVIWLWRRTPDHRWIAHLGFALIIAGALGNLIDRFLYGHVI 130

Query: 61  DYIMIHTQTWSFAVFNLADLFISIGTCIIIYDDII 95
           DY++ HT+TWSFAVFNLAD FI+IG   +I D+++
Sbjct: 131 DYVLFHTETWSFAVFNLADSFITIGAGCVILDELL 165

Species: Agrobacterium tumefaciens
Genus: Agrobacterium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 74/103 (71%), Gaps = 1/103 (0%)

Query: 1   MLSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVI 60
           MLS +    +V +R++I+AF+ ++W +  K + +  +GY LI  GA+GN+VD   YG+VI
Sbjct: 66  MLSGMDGWFIVGMRLVIVAFVVWLWYRTAKDRWLAHLGYALIIAGAIGNLVDRFAYGHVI 125

Query: 61  DYIMIHTQTWSFAVFNLADLFISIGTCIIIYDDIILQHRQKGK 103
           DYI+ HT++WSFAVFNLAD FI+IG   +I D+++L  ++ G+
Sbjct: 126 DYILFHTESWSFAVFNLADSFITIGAGCVILDELLLP-KKAGR 167

Species: Rhizobium etli
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 69/103 (66%), Gaps = 2/103 (1%)

Query: 1   MLSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVI 60
           ML ++    +VS+R++I+ F+ ++W+K    ++   +G+  I  GA GN++D   YG+VI
Sbjct: 61  MLEDMHGWFIVSMRLVIVVFVLWLWRKTAADRTFAHLGFAFIIAGAAGNLLDRFFYGHVI 120

Query: 61  DYIMIHTQTWSFAVFNLADLFISIGTCIIIYDDIILQHRQKGK 103
           DYI+ HTQTWSFAVFNLAD FI+IG   +I D+ +  H +  K
Sbjct: 121 DYILFHTQTWSFAVFNLADSFITIGAACVILDEFL--HARAAK 161

Species: Agrobacterium tumefaciens
Genus: Agrobacterium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/103 (44%), Positives = 74/103 (71%), Gaps = 1/103 (0%)

Query: 1   MLSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVI 60
           MLS +    +V +R++I+AF+ ++W +  K + +  +GY LI  GA+GN+VD   YG+VI
Sbjct: 53  MLSGMDGWFIVGMRLIIVAFVIWLWYRTAKDRWLAHLGYALIIAGAIGNLVDRFAYGHVI 112

Query: 61  DYIMIHTQTWSFAVFNLADLFISIGTCIIIYDDIILQHRQKGK 103
           DYI+ +T++WSFAVFNLAD FI+IG   +I D+++L  ++ G+
Sbjct: 113 DYILFYTESWSFAVFNLADSFITIGAACVILDELLLP-KKAGR 154

Species: Rhizobium etli
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  108 bits (273), Expect = 2e-25
 Identities = 45/102 (44%), Positives = 70/102 (68%)

Query: 1   MLSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVI 60
           MLS +    LV+I + +IAF+ ++W +    +    +G+ LI  GA+GN++D  +YGYVI
Sbjct: 57  MLSGMHGWGLVAITLAVIAFVLWLWWRTAPDRVFARLGFALIIGGAIGNLIDRFMYGYVI 116

Query: 61  DYIMIHTQTWSFAVFNLADLFISIGTCIIIYDDIILQHRQKG 102
           DYI+ HT TWSFAVFNLAD FI+IG  +II ++++   +++ 
Sbjct: 117 DYILFHTPTWSFAVFNLADSFITIGAGLIILEELLGWRKERR 158

Length = 158

 Score = 77.5 bits (192), Expect = 6e-16
 Identities = 29/80 (36%), Positives = 47/80 (58%)

Query: 13  IRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHTQTWSF 72
           I I I   + ++  ++   + + +I Y LI  GALGN++D  ++G+V+D+I  +   W F
Sbjct: 74  IAIGISVVLVYLLYRSKALQKLNNIAYALILGGALGNLIDRLVHGFVVDFIDFYWGNWHF 133

Query: 73  AVFNLADLFISIGTCIIIYD 92
             FNLAD  I IG  ++I D
Sbjct: 134 PAFNLADSAICIGAVLLILD 153

Length = 160

 Score = 73.3 bits (180), Expect = 1e-14
 Identities = 32/98 (32%), Positives = 57/98 (58%)

Query: 6   SPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMI 65
                + I +L+I  + +   +  K++ ++ I   LI  GALGN++D    G+V+D+I  
Sbjct: 68  QSGWFLLIALLVILGLLYFLIRLKKSRKLYAIALALIIGGALGNLIDRLFRGFVVDFIDF 127

Query: 66  HTQTWSFAVFNLADLFISIGTCIIIYDDIILQHRQKGK 103
           H   W F +FNLAD+FIS+G  +++ D  + + ++K K
Sbjct: 128 HYGNWHFPIFNLADVFISVGVILLVLDSFLSKKKKKKK 165

Length = 167

 Score = 64.8 bits (158), Expect = 4e-12
 Identities = 28/88 (31%), Positives = 54/88 (61%), Gaps = 1/88 (1%)

Query: 15  ILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIH-TQTWSFA 73
           +++  F+    KK P+   +  +G  L+  GA+GN++D  L+G+VID+I +H    W + 
Sbjct: 83  LIMSLFLIVYLKKAPRQAKLLSLGLALVLGGAIGNLIDRLLHGHVIDFIHVHYADVWHYP 142

Query: 74  VFNLADLFISIGTCIIIYDDIILQHRQK 101
           +FN+AD+ I +G  +I+ D + L+ ++ 
Sbjct: 143 IFNIADIGICVGVALIVIDMLFLEKKRN 170

Length = 171

 Score = 63.5 bits (155), Expect = 1e-11
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 8   TILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHT 67
            +LV+++         IW     T+ +  I   LI  GA+GN +D   YG V D++++H 
Sbjct: 68  WLLVAVKAAAAVA-LAIWMARSTTR-LAAIALGLIIGGAIGNAIDRLAYGAVFDFVLLHA 125

Query: 68  QTWSFAVFNLADLFISIGTCIIIYDDIILQHRQK 101
            T+S+ VFNLAD  I  G   ++YD +      K
Sbjct: 126 GTYSWYVFNLADAAIVAGVAGLLYDSLFGAPAAK 159

Length = 161

 Score = 62.3 bits (152), Expect = 3e-11
 Identities = 33/83 (39%), Positives = 56/83 (67%), Gaps = 2/83 (2%)

Query: 9   ILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHTQ 68
           IL++I I+I+  I++I K  P +K ++ I   LI +GA+GN++D   YGYV+D+I  H +
Sbjct: 60  ILITI-IVILGLIYYIIKYKPTSK-LYKISLSLIISGAIGNLIDRIRYGYVVDFIDFHFK 117

Query: 69  TWSFAVFNLADLFISIGTCIIIY 91
            + F VFN+AD+ + +GT ++  
Sbjct: 118 DYYFPVFNVADILVVVGTILLAI 140

Length = 146

 Score = 59.9 bits (145), Expect = 1e-10
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 18  IAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIH---TQTWSFAV 74
           +AFI   ++K  + +    +   L+  GA+GN VD    GYVID+I  +        +  
Sbjct: 105 VAFILHYYRKLRQEQRYLQVALALVLGGAVGNFVDRLARGYVIDFIEWYWWNRPDIRWPT 164

Query: 75  FNLADLFISIGTCIIIYD 92
           FN+AD  I +G  +++  
Sbjct: 165 FNVADSLIVVGVAMLVLH 182

Length = 192

 Score = 58.3 bits (141), Expect = 4e-10
 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)

Query: 2   LSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVID 61
           L  +   +  ++ +  +  +     + P+      +G   I  GA+GNV+D   YG V+D
Sbjct: 67  LGGIGRVVFSAVSLAAVLLLGVWLTRTPRPLVAAALG--AIMGGAIGNVIDRMRYGAVVD 124

Query: 62  YIMIHTQTWSFAVFNLADLFISIGTCIIIYDDIILQHRQ 100
           ++  H   WS+ VFNLAD  I  G  +++ D ++ + + 
Sbjct: 125 FLHAHAFGWSWYVFNLADAAIDCGVAVLLIDSLLARRQA 163

Length = 167

 Score = 54.8 bits (132), Expect = 4e-09
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%)

Query: 8   TILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHT 67
              + + +++ A + F + K PK K +  +   LI  GALGN+ D    G V+D+  +  
Sbjct: 58  WFFIPVTVIVCAGVLFFYFKIPKQKWLLRLTLGLIGGGALGNLYDRLRIGKVVDF--LDF 115

Query: 68  QTWSFAVFNLADLFISIGTCIIIYD 92
           + W   VFN+AD  I IG  ++++ 
Sbjct: 116 RIW--PVFNIADSAIVIGVGLLMWL 138

Length = 150

 Score = 54.3 bits (131), Expect = 6e-09
 Identities = 25/89 (28%), Positives = 44/89 (49%)

Query: 13  IRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHTQTWSF 72
           + I I   +F    +  +   I +I + LI  GALGN +D  + G V+D+   +   + F
Sbjct: 76  LAIAISLGLFVFLLRYKELFKITNIAFGLIFGGALGNFIDRLVRGGVVDFFDFYFGNYHF 135

Query: 73  AVFNLADLFISIGTCIIIYDDIILQHRQK 101
            +FN AD  I IG  +++      + ++K
Sbjct: 136 PIFNFADSSICIGVILLLLYFFFPKRKKK 164

Alternate name: lipoprotein signal peptidase. Length = 166

 Score = 51.5 bits (124), Expect = 5e-08
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)

Query: 15  ILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHTQTWSFAV 74
           + I   I+++WK   K    F +G  LI  G +GN +D    GYV+D  M H    +FA+
Sbjct: 67  LAIGVAIYYLWKHRYK-NIWFLLGLTLIIAGGIGNFIDRLRLGYVVD--MFHLDFINFAI 123

Query: 75  FNLADLFISIGTCIII 90
           FN+AD ++++G  +++
Sbjct: 124 FNVADSYLTVGVILLL 139

Length = 150

 Score = 50.1 bits (120), Expect = 1e-07
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 4/93 (4%)

Query: 9   ILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHTQ 68
           +L  I  LII F++ +   +  +    ++   LI  GALGN+ D    G V D+I I+  
Sbjct: 69  LLTPIIALIITFLYALKSNDKLS----NLSMGLIGGGALGNLYDRFFLGQVRDFIDIYIG 124

Query: 69  TWSFAVFNLADLFISIGTCIIIYDDIILQHRQK 101
            + +  FN+AD  ISIG  + I  +   + R+K
Sbjct: 125 DFHWPAFNIADASISIGIALFILYEHFFKKRKK 157

Length = 159

 Score = 48.3 bits (115), Expect = 4e-07
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)

Query: 15  ILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHTQTWSFAV 74
           ++ +  I+    + P  + +  +   LI  GALGNV+D    GYV+D+I +    W F +
Sbjct: 78  VISLGAIYLYRTQLPNRRLLIQVAMGLILGGALGNVIDRIRLGYVVDFIQVG---W-FPI 133

Query: 75  FNLADLFISIGTCII 89
           FNLAD  I++G  ++
Sbjct: 134 FNLADSAITVGAALL 148

Length = 169

 Score = 48.4 bits (115), Expect = 5e-07
 Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 4/100 (4%)

Query: 6   SPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMI 65
           S  I   + + +I  +F ++ ++   KS   +G  ++  GALGN+ D   +G V D+I +
Sbjct: 62  SNLIFTYVSLGVILMLFVLFVQSKCNKSTICMG--VVIGGALGNLADRLRFGAVYDFISL 119

Query: 66  HTQTWSFAVFNLADLFISIGTCIIIYDDIILQHRQKGKID 105
           H   + +  FN AD+ ++ G  +I +  + + +  K  +D
Sbjct: 120 HAGEFHWPAFNFADVCVTCG--VICFLCLEVMYHAKACVD 157

Length = 170

 Score = 48.0 bits (114), Expect = 5e-07
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 7   PTILVSIR-ILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMI 65
             ++V++  ++++A   + W++ P    +  I    +  GAL NVVD    G V DY  +
Sbjct: 60  VGVIVAVTAVIVVALAVYAWRRAPTAGWVERIAGGAVIGGALANVVDRARDGLVTDY--L 117

Query: 66  HTQTWSFAVFNLADLFISIGTCII 89
           HT  W    FNLAD F+  G  +I
Sbjct: 118 HTGWWP--TFNLADTFLVTGFAVI 139

Length = 156

 Score = 47.8 bits (114), Expect = 5e-07
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 2/84 (2%)

Query: 3   SNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDY 62
           S+ +   L+ + + I A +  IW +         I   L+  GAL NV+D  +YGYV+D+
Sbjct: 60  SDAARWALIGLALAICAGVV-IWVRRSGGSRWMLISAGLLIGGALANVLDRVIYGYVLDF 118

Query: 63  I-MIHTQTWSFAVFNLADLFISIG 85
           + M      +  VFNLAD+FI  G
Sbjct: 119 LNMSCCGINNPFVFNLADVFIFAG 142

Length = 157

 Score = 45.4 bits (107), Expect = 3e-06
 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 10  LVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHTQT 69
            + I +++  F+  +  +N          Y LI  GA+GN++D    GYV+D    + + 
Sbjct: 39  FIGIAVVVSIFLIKLILENRHKGEAI--AYSLILGGAMGNLIDRVFRGYVVDSFDFYWRD 96

Query: 70  WSFAVFNLADLFISIGTCIII 90
           W +  FNLAD+ I +G  + +
Sbjct: 97  WHWPAFNLADIAIVLGALLFV 117

Length = 136

 Score = 44.8 bits (106), Expect = 5e-06
 Identities = 27/91 (29%), Positives = 53/91 (58%), Gaps = 7/91 (7%)

Query: 1   MLSNVSPTIL-VSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYV 59
           + SN+S  +L   + +++   +     +  + + +  +G+IL   GALGN++D   +GYV
Sbjct: 47  LFSNLSEQVLWTVLFVVVFLSLLPYIFRFSRLERMA-MGFIL--GGALGNLLDRIRFGYV 103

Query: 60  IDYIMIHTQTWSFAVFNLADLFISIGTCIII 90
           +D++     T+   +FNLAD+FI +G  ++I
Sbjct: 104 LDFL---NLTFLPTIFNLADVFIIVGGALMI 131

Length = 186

 Score = 42.2 bits (99), Expect = 3e-05
 Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 3/80 (3%)

Query: 11  VSIRILIIAFIFFIWKKNPKTKSIFD-IGYILITTGALGNVVDHCLYGYVIDYIMIHTQT 69
           + I + ++A +F ++  N +   IF  +G ILI +GALGN++D    G+V+DY       
Sbjct: 59  IFIIVALLATVFGLYYLNTRKVHIFGRLGIILIISGALGNLIDRVRLGFVVDYFDFRV-I 117

Query: 70  WSFAVFNLADLFISIGTCII 89
           W + VFN+AD+F+ +GT  +
Sbjct: 118 WEY-VFNVADVFVVVGTVFL 136

Length = 148

 Score = 42.3 bits (100), Expect = 3e-05
 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 12/95 (12%)

Query: 6   SPTILVSIRILIIA--FIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYI 63
            P +L+ +   I A    + +  KN     +F + + LI  G +GN++D    G V+D+I
Sbjct: 58  PPEVLLLLTGAISAGVLWYVLRSKNRTP--LFLLAFGLILGGGIGNLIDRITSGRVVDFI 115

Query: 64  -------MIHTQTWS-FAVFNLADLFISIGTCIII 90
                   I     S + +FN+AD  I+IG C+++
Sbjct: 116 YFDLYQGYIFGIWVSLWPIFNIADSAITIGACMLL 150

Length = 159

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 24/82 (29%), Positives = 48/82 (58%), Gaps = 2/82 (2%)

Query: 9   ILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHTQ 68
           +++++ ++II    F      K  +   I  + I  GA GN++D  L GYV+D+  I+ +
Sbjct: 71  LVITVAVVIIMAFVFFKLPATKKYNPLHIILVFIVAGAAGNLIDRILNGYVVDF--IYFK 128

Query: 69  TWSFAVFNLADLFISIGTCIII 90
             +F +FN+AD+++++ T + I
Sbjct: 129 LINFPIFNVADIYVTVSTFLFI 150

Length = 174

 Score = 41.5 bits (98), Expect = 5e-05
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 7/97 (7%)

Query: 8   TILVSIRILI--IAFIFFIWKKNPKTKSIFD-IGYILITTGALGNVVDHCLYGYVIDYIM 64
           TIL+ +  L+  I  I++IW+K P    I+  +    +  G LGN +D    GYVID++ 
Sbjct: 65  TILLGLLSLLVSIGLIYWIWRKKPL--PIWQLLALAFLLGGTLGNGIDRWRLGYVIDFLN 122

Query: 65  IHTQTWSFAVFNLADLFISIGTCIIIYDDIILQHRQK 101
           +     +F +FN+AD+ I+I     I D I  +   K
Sbjct: 123 L--VPINFPIFNIADIAINIAVICFIIDLIKNRRGSK 157

Length = 159

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 15  ILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHTQTWSFAV 74
           ++I A ++++    PK   +   G  L+  GA+GN +D      V+DY+  H+  W F  
Sbjct: 68  LIIAALLWYLTSSAPKMSRLSRAGAALLLGGAVGNFIDRLDGRGVVDYL--HS-GW-FPT 123

Query: 75  FNLADLFISIGTCIII 90
           FNLAD+F++ G  +++
Sbjct: 124 FNLADVFVTTGVALLV 139

Length = 153

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 15  ILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHTQTWSFAV 74
           I++ A I+++ K     +  F +   +I  GALGN++D     YV D++       ++ +
Sbjct: 66  IVVGALIYYLIKILKTGEVAFKLSLAIIIGGALGNLIDRVRLNYVTDFLDF--TLINYPI 123

Query: 75  FNLADLFISIGTCIIIY 91
           FNLAD+F+  G  ++ Y
Sbjct: 124 FNLADVFVVSGVVMLSY 140

Length = 154

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 10  LVSIRILIIAFIF-FIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYI-MIHT 67
           LV + + I A+++ ++W+  P   +    G  L+  GALGNVVD  LYG V D++ M   
Sbjct: 67  LVIVSLAISAWVWRWVWRSTPTRLARISGG--LLIGGALGNVVDRVLYGAVADFLNMSCC 124

Query: 68  QTWSFAVFNLADLFISIG 85
              +   FN+AD+ I  G
Sbjct: 125 GIENPYAFNVADIAIFAG 142

Length = 185

 Score = 39.1 bits (91), Expect = 2e-04
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 19/93 (20%)

Query: 9   ILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHTQ 68
           +LV + +L+    + + +  P+      +   LI  GA+GN +D   +G V D  M+H+ 
Sbjct: 92  LLVGLGLLV----YLLRRPQPR---FLTVVLSLIAAGAIGNAIDGLRFGRVTD--MLHSP 142

Query: 69  TWS----------FAVFNLADLFISIGTCIIIY 91
             S          F +FNLAD+ +  GT ++++
Sbjct: 143 ALSAVTRALGQGDFPIFNLADMCVVGGTLLLLF 175

Length = 184

 Score = 77.1 bits (191), Expect = 1e-15
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 3/92 (3%)

Query: 1   MLSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVI 60
           + S      L  I +L I  + +   +  K   +  I   LI  GALGN++D   YG V+
Sbjct: 48  LFSG-QRWFLSLIALLAILALLYYLLRLKKRSRLAAIALGLILGGALGNLIDRLRYGAVV 106

Query: 61  DYIMIHTQTWSFAVFNLADLFISIGTCIIIYD 92
           D++  H   W + VFN+AD+ I++G  +++ D
Sbjct: 107 DFLDFH--IWHWPVFNVADIAITVGVILLLLD 136

Length = 143

 Score = 50.7 bits (121), Expect = 8e-08
 Identities = 21/59 (35%), Positives = 34/59 (57%)

Query: 37  IGYILITTGALGNVVDHCLYGYVIDYIMIHTQTWSFAVFNLADLFISIGTCIIIYDDII 95
           I Y LI  GA+GN++D    GYV+D    + + W +  FNLAD+ I +G  + +   ++
Sbjct: 98  IAYSLILGGAMGNLIDRVFRGYVVDSFDFYWRDWHWPAFNLADIAIVLGALLFVSSSLL 156

Length = 170

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 10/60 (16%)

Query: 37  IGYILITTGALGNVVDHC------LYGYVIDYIMIHTQTWSFAVFNLADLFISIGTCIII 90
           +G  LI  GALGN+VD        L G+V+D++ +    W + VFN+AD  I  G  +++
Sbjct: 124 LGLGLILGGALGNLVDRFFRAPGPLRGHVVDFLSVG---W-WPVFNVADSAIVCGAILLV 179

Length = 209

Probab=100.00  E-value=1.9e-35  Score=199.77  Aligned_cols=103  Identities=32%  Similarity=0.566  Sum_probs=91.5

Q ss_pred             CCCCH---HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
Q ss_conf             94520---029999999999999999999655502289999999999887999998976312757766236815408999
Q gi|254780749|r    1 MLSNV---SPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHTQTWSFAVFNL   77 (108)
Q Consensus         1 m~s~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~li~gGaiGNliDR~~~G~VvDfi~~~~~~~~~pvFNv   77 (108)
T Consensus        57 l~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~l~li~gGaiGNliDR~~~G~VvDFi~~~~~~~~~piFNv  136 (162)
T PRK00376         57 FLADAGGWQRWFFTIIAIGISVGLVYLLRRSKALQKLLAIAYALILGGALGNLIDRFFHGHVVDFIDFYWGNWHFPVFNL  136 (162)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEH
T ss_conf             11466347999999999999999999999803403899999999998664228899717977658886577777760668


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             99999999999999999400043211
Q gi|254780749|r   78 ADLFISIGTCIIIYDDIILQHRQKGK  103 (108)
Q Consensus        78 AD~~I~iG~~lli~~~~~~~~~~k~~  103 (108)
T Consensus       137 AD~~I~iG~~llii~~~~~~kk~~~~  162 (162)
T PRK00376        137 ADSAICIGAILLILDGFFPKKKKKKK  162 (162)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999999999999999853011059

Probab=100.00  E-value=1.1e-34  Score=195.89  Aligned_cols=103  Identities=34%  Similarity=0.682  Sum_probs=90.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
Q ss_conf             94520029999999999999999999655502289999999999887999998976312757766236815408999999
Q gi|254780749|r    1 MLSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHTQTWSFAVFNLADL   80 (108)
Q Consensus         1 m~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~li~gGaiGNliDR~~~G~VvDfi~~~~~~~~~pvFNvAD~   80 (108)
T Consensus        64 ~ls~~~~~-~~~i~~~vi~~l~~~l~~~~~~~~~~~i~~~lIigGAlGN~iDR~~~g~VvDfi~~~~~~~~fpiFNlAD~  142 (167)
T COG0597          64 LLSGQSGW-FLLIALLVILGLLYFLIRLKKSRKLYAIALALIIGGALGNLIDRLFRGFVVDFIDFHYGNWHFPIFNLADV  142 (167)
T ss_pred             HHCCCCCH-HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEHHHH
T ss_conf             45388525-89999999999999999965306799999999998777779988520340069999517646653255678


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             999999999999994000432112
Q gi|254780749|r   81 FISIGTCIIIYDDIILQHRQKGKI  104 (108)
Q Consensus        81 ~I~iG~~lli~~~~~~~~~~k~~~  104 (108)
T Consensus       143 ~I~iG~illil~~~~~~~~~~~~~  166 (167)
T COG0597         143 FISVGVILLVLDSFLSKKKKKKKK  166 (167)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             999819999999984132103367

Probab=100.00  E-value=1.3e-32  Score=185.36  Aligned_cols=101  Identities=25%  Similarity=0.420  Sum_probs=95.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCEEEEEECCCC----CHHHH
Q ss_conf             5200299999999999999999996555022899999999998879999989763--12757766236815----40899
Q gi|254780749|r    3 SNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYG--YVIDYIMIHTQTWS----FAVFN   76 (108)
Q Consensus         3 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~li~gGaiGNliDR~~~G--~VvDfi~~~~~~~~----~pvFN   76 (108)
T Consensus        77 ~GW~~~fl~~l~~~i~~~l~vF~~~~~~~~k~~~~a~gli~gGa~GN~~DRl~~gs~~VvDf~~f~~~~~~Gldrfp~FN  156 (183)
T TIGR00077        77 GGWQVYFLKGLALAISLGLVVFLLRYKELQKITNIAYGLILGGAVGNVIDRLVRGSDGVVDFLDFYLGNYHGLDRFPIFN  156 (183)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCHHH
T ss_conf             50689999999999999999998530677889889999999988988887301689934889999874230522042445


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             999999999999999999400043211
Q gi|254780749|r   77 LADLFISIGTCIIIYDDIILQHRQKGK  103 (108)
Q Consensus        77 vAD~~I~iG~~lli~~~~~~~~~~k~~  103 (108)
T Consensus       157 ~AD~~I~~G~~~Lll~~f~~~~k~~~~  183 (183)
T TIGR00077       157 LADVSICVGVILLLLKFFFPKRKKKKD  183 (183)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             888999998999999987454210279

Clans are groups of families for which there is evidence of common ancestry. Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. Aspartic endopeptidases 3.4.23. from EC of vertebrate, fungal and retroviral origin have been characterised . More recently, aspartic endopeptidases associated with the processing of bacterial type 4 prepilin and archaean preflagellin have been described , . Structurally, aspartic endopeptidases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe has probably evolved from the other through a gene duplication event in the distant past. In modern-day enzymes, although the three-dimensional structures are very similar, the amino acid sequences are more divergent, except for the catalytic site motif, which is very conserved. The presence and position of disulphide bridges are other conserved features of aspartic peptidases. All or most aspartate peptidases are endopeptidases. These enzymes have been assigned into clans (proteins which are evolutionary related), and further sub-divided into families, largely on the basis of their tertiary structure. This group of aspartic peptidases belong to the MEROPS peptidase family A8 (signal peptidase II family, clan AC). The catalytic residues have not been identified, but three conserved aspartates can be identified from sequence alignments. The type example is the Escherichia coli lipoprotein signal peptidase or SPase II (). This enzyme recognises a conserved sequence and cuts in front of a cysteine residue to which a glyceride-fatty acid lipid is attached. SPase II is an integral membrane protein that is anchored in the membrane. Bacterial cell walls contain large amounts of murein lipoprotein, a small protein that is both N-terminally bound to lipid and attached to membrane peptidoglycan (murein) through the epsilon-amino group of its C-terminal lysine residue . Secretion of this lipoprotein is facilitated by the action of lipoprotein signal peptidase (also known as leader peptidase II), located in the inner membrane , . The enzyme is inhibited by globomycin and also by pepstatin, suggesting that it is an aspartic peptidase . ; GO: 0004190 aspartic-type endopeptidase activity, 0006508 proteolysis, 0016020 membrane.

Probab=99.98  E-value=1.6e-32  Score=184.91  Aligned_cols=100  Identities=24%  Similarity=0.510  Sum_probs=76.3

Q ss_pred             CCCCHHHHH----HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEEEEECCC----C
Q ss_conf             945200299----9999999999999999965550228999999999988799999897631-275776623681----5
Q gi|254780749|r    1 MLSNVSPTI----LVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGY-VIDYIMIHTQTW----S   71 (108)
Q Consensus         1 m~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~li~gGaiGNliDR~~~G~-VvDfi~~~~~~~----~   71 (108)
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~lIlgGAiGNliDR~~~~~~VvDFid~~~~~~~g~~~  137 (169)
T PRK01574         60 IGSNINYSLKKLFFLIIPIIILIFVFSFYL--KEDNRIQRIALLLILSGGIGNLIDRLFRPLGVVDFLDVKFFGIFGLER  137 (169)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC
T ss_conf             426995589999999999999999999999--521578999999999898873998810689983779862245346688


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             4089999999999999999999940004321
Q gi|254780749|r   72 FAVFNLADLFISIGTCIIIYDDIILQHRQKG  102 (108)
Q Consensus        72 ~pvFNvAD~~I~iG~~lli~~~~~~~~~~k~  102 (108)
T Consensus       138 wPvFNvAD~~I~iGv~llli~~~~~~~k~~~  168 (169)
T PRK01574        138 WPTFNFADSYVVIGMILFLIYDFFKKRKSTN  168 (169)
T ss_pred             CCEEEHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             8705699999999999999999997520248

Probab=99.97  E-value=1.3e-31  Score=180.18  Aligned_cols=94  Identities=31%  Similarity=0.584  Sum_probs=82.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
Q ss_conf             94520029999999999999999999655502289999999999887999998976312757766236815408999999
Q gi|254780749|r    1 MLSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHTQTWSFAVFNLADL   80 (108)
Q Consensus         1 m~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~li~gGaiGNliDR~~~G~VvDfi~~~~~~~~~pvFNvAD~   80 (108)
T Consensus        48 ~~~~~-~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~li~gGaiGNliDR~~~G~VvDfi~~~~--~~~pvFNvAD~  124 (143)
T pfam01252        48 LFSGQ-RWFLSLIALLAILALLYYLLRLKKRSRLAAIALGLILGGALGNLIDRLRYGAVVDFLDFHI--WHWPVFNVADI  124 (143)
T ss_pred             CCCCC-CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC--CCCCEEEHHHH
T ss_conf             23698-4699999999999999999994243489999999999877510788876584223577057--78732159999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999400
Q gi|254780749|r   81 FISIGTCIIIYDDIILQ   97 (108)
Q Consensus        81 ~I~iG~~lli~~~~~~~   97 (108)
T Consensus       125 ~I~iG~~lli~~~~~~~  141 (143)
T pfam01252       125 AITVGVILLLLDSLFKK  141 (143)
T ss_pred             HHHHHHHHHHHHHHHHC
T ss_conf             99999999999999852

Probab=99.24  E-value=2e-11  Score=77.59  Aligned_cols=87  Identities=24%  Similarity=0.322  Sum_probs=62.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HCCCCEEEEEECCCCCHHHHHHH
Q ss_conf             4520029999999999999999999655502289999999999887999998976--31275776623681540899999
Q gi|254780749|r    2 LSNVSPTILVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLY--GYVIDYIMIHTQTWSFAVFNLAD   79 (108)
Q Consensus         2 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~li~gGaiGNliDR~~~--G~VvDfi~~~~~~~~~pvFNvAD   79 (108)
T Consensus        84 l~d~p~lvYflQ~~ls~i~lf~lvFs---~~y~~i~~it~l~FG~L~N~~DR~ts~n~~VlDYF~F~~~---saiFNfaD  157 (184)
T PRK00573         84 LADQPGLVYFLQGFLSFIALFFLVFM---TKYNYIFWITTLAFGSLGNFFDRLTSANDEVLDYFIFQGG---NSVFNFAD  157 (184)
T ss_pred             ECCCCCCCHHHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECCC---CEEECCCC
T ss_conf             55899700399888999999999871---5501501007876430777776551377732578896598---62440534


Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             999999999999999
Q gi|254780749|r   80 LFISIGTCIIIYDDI   94 (108)
Q Consensus        80 ~~I~iG~~lli~~~~   94 (108)
T Consensus       158 ~cI~~gfi~lf~~fl  172 (184)
T PRK00573        158 CCITFGFIGLFFCFL  172 (184)
T ss_pred             HHHHHHHHHHHHHHH
T ss_conf             466786999999999

Probab=93.48  E-value=0.12  Score=27.81  Aligned_cols=59  Identities=25%  Similarity=0.320  Sum_probs=37.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             5022899999999998879999989763127577662368154089999999999999999999
Q gi|254780749|r   30 KTKSIFDIGYILITTGALGNVVDHCLYGYVIDYIMIHTQTWSFAVFNLADLFISIGTCIIIYDD   93 (108)
Q Consensus        30 ~~~~~~~i~l~li~gGaiGNliDR~~~G~VvDfi~~~~~~~~~pvFNvAD~~I~iG~~lli~~~   93 (108)
T Consensus         4 ~k~~~~r~~~~lLlg~iiGGii-----G~~~~~~~~~~~~~~~~~~~~v~~i~~i~~liiiil~   62 (248)
T pfam11368         4 KKKRILRYLIFLLLGGIIGGII-----GGFGGAIAGFLENLSFSTIDNVQLIIILARIIIIILT   62 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             6899999999999999999999-----9999999875137763456439999999999999999

Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.