254780754
inorganic polyphosphate/ATP-NAD kinase
GeneID in NCBI database: | 8209759 | Locus tag: | CLIBASIA_03205 |
Protein GI in NCBI database: | 254780754 | Protein Accession: | YP_003065167.1 |
Gene range: | +(512719, 513513) | Protein Length: | 264aa |
Gene description: | inorganic polyphosphate/ATP-NAD kinase | ||
COG prediction: | [G] Predicted sugar kinase | ||
KEGG prediction: | ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23] | ||
SEED prediction: | NAD kinase (EC 2.7.1.23) | ||
Pathway involved in KEGG: | Nicotinate and nicotinamide metabolism [PATH:las00760] | ||
Subsystem involved in SEED: | NAD and NADP cofactor biosynthesis global | ||
sequence | sequence profile |
Prediction of Local Sequence Properties
Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
No hits with e-value below 0.05
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
Identity | Alignment graph | Length | Definition | Round | E-value |
Target | 264 | inorganic polyphosphate/ATP-NAD kinase [Candidatus Libe | |||
315121917 | 261 | inorganic polyphosphate/ATP-NAD kinase [Candidatus Libe | 1 | 1e-108 | |
222085648 | 257 | NAD(+) kinase protein [Agrobacterium radiobacter K84] L | 1 | 4e-80 | |
325292705 | 257 | inorganic polyphosphate/ATP-NAD kinase [Agrobacterium s | 1 | 3e-73 | |
116251521 | 257 | inorganic polyphosphate/ATP-NAD kinase [Rhizobium legum | 1 | 1e-72 | |
86357285 | 257 | inorganic polyphosphate/ATP-NAD kinase [Rhizobium etli | 1 | 2e-72 | |
327191366 | 257 | inorganic polyphosphate/ATP-NAD kinase [Rhizobium etli | 1 | 2e-72 | |
15888671 | 257 | inorganic polyphosphate/ATP-NAD kinase [Agrobacterium t | 1 | 2e-72 | |
218663195 | 257 | inorganic polyphosphate/ATP-NAD kinase [Rhizobium etli | 1 | 2e-72 | |
241204142 | 257 | inorganic polyphosphate/ATP-NAD kinase [Rhizobium legum | 1 | 4e-72 | |
190891334 | 257 | NAD(+) kinase [Rhizobium etli CIAT 652] Length = 257 | 1 | 4e-72 |
>gi|315121917|ref|YP_004062406.1| inorganic polyphosphate/ATP-NAD kinase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 261 | Back alignment and organism information |
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Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 188/262 (71%), Positives = 224/262 (85%), Gaps = 3/262 (1%) Query: 1 MDRNIQKIHFKASNAKKAQEAYDKFVKIYGNSTSEEADVIVVLGGDGFMLQSFHQSKEYD 60 M RNIQKIHF+AS ++KAQEAY +F+KIY NS+ EE+D IV+LGGDGFMLQ+ S+ + Sbjct: 1 MRRNIQKIHFRASKSEKAQEAYKEFMKIYENSSYEESDAIVILGGDGFMLQNL--SRLHG 58 Query: 61 KPIYGMNCGSVGFLMNEYCIENLVERLSVAVECTFHPLKMTVFDYDNSICAENILAINEV 120 KP+YG+NCGSVGFLMN+YC +N++ERLS A+E TFHPLKM VFD +SICAE +NEV Sbjct: 59 KPLYGINCGSVGFLMNDYCTKNILERLSDAIEYTFHPLKMIVFDDTDSICAE-FFGVNEV 117 Query: 121 SIIRKPGQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPLESR 180 SI+RK +Q+VQAAKL+V ++ QVRLPELVCDGL+V+TP+GSTAYNFSALGPILP S Sbjct: 118 SILRKLVSDQVVQAAKLKVTINSQVRLPELVCDGLIVATPLGSTAYNFSALGPILPFGSP 177 Query: 181 HLLLTPVSPFKPRRWHGAILPNDVMIEIQVLEHKQRPVIATADRLAIEPVSRINVTQSSD 240 HL+LTPVSPFKPRRW GA+L NDV+IEIQVLEH+QRPVIATADRLAIEPVSR+ +T S D Sbjct: 178 HLVLTPVSPFKPRRWSGAVLSNDVIIEIQVLEHQQRPVIATADRLAIEPVSRLRITHSPD 237 Query: 241 ITMRILSDSHRSWSDRILTAQF 262 TMRILSD +R WSDRIL AQF Sbjct: 238 TTMRILSDPNRPWSDRILAAQF 259 |
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|222085648|ref|YP_002544178.1| NAD(+) kinase protein [Agrobacterium radiobacter K84] Length = 257 | Back alignment and organism information |
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>gi|325292705|ref|YP_004278569.1| inorganic polyphosphate/ATP-NAD kinase [Agrobacterium sp. H13-3] Length = 257 | Back alignment and organism information |
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>gi|116251521|ref|YP_767359.1| inorganic polyphosphate/ATP-NAD kinase [Rhizobium leguminosarum bv. viciae 3841] Length = 257 | Back alignment and organism information |
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>gi|86357285|ref|YP_469177.1| inorganic polyphosphate/ATP-NAD kinase [Rhizobium etli CFN 42] Length = 257 | Back alignment and organism information |
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>gi|327191366|gb|EGE58392.1| inorganic polyphosphate/ATP-NAD kinase [Rhizobium etli CNPAF512] Length = 257 | Back alignment and organism information |
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>gi|15888671|ref|NP_354352.1| inorganic polyphosphate/ATP-NAD kinase [Agrobacterium tumefaciens str. C58] Length = 257 | Back alignment and organism information |
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>gi|218663195|ref|ZP_03519125.1| inorganic polyphosphate/ATP-NAD kinase [Rhizobium etli IE4771] Length = 257 | Back alignment and organism information |
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>gi|241204142|ref|YP_002975238.1| inorganic polyphosphate/ATP-NAD kinase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 257 | Back alignment and organism information |
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>gi|190891334|ref|YP_001977876.1| NAD(+) kinase [Rhizobium etli CIAT 652] Length = 257 | Back alignment and organism information |
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Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
Identity | Alignment graph | Length | Definition | E-value |
Target | 264 | inorganic polyphosphate/ATP-NAD kinase [Candidatus Libe | ||
PRK04761 | 246 | PRK04761, ppnK, inorganic polyphosphate/ATP-NAD kinase; | 3e-98 | |
pfam01513 | 243 | pfam01513, NAD_kinase, ATP-NAD kinase | 6e-24 | |
PRK14075 | 256 | PRK14075, pnk, inorganic polyphosphate/ATP-NAD kinase; | 1e-16 | |
PRK03372 | 306 | PRK03372, ppnK, inorganic polyphosphate/ATP-NAD kinase; | 3e-16 | |
PRK02231 | 272 | PRK02231, ppnK, inorganic polyphosphate/ATP-NAD kinase; | 7e-16 | |
PRK02155 | 291 | PRK02155, ppnK, NAD(+)/NADH kinase family protein; Prov | 3e-14 | |
COG0061 | 281 | COG0061, COG0061, Predicted sugar kinase [Carbohydrate | 3e-40 | |
PRK03708 | 277 | PRK03708, ppnK, inorganic polyphosphate/ATP-NAD kinase; | 1e-19 | |
KOG2178 | 409 | KOG2178, KOG2178, KOG2178, Predicted sugar kinase [Carb | 1e-14 | |
PRK01185 | 271 | PRK01185, ppnK, inorganic polyphosphate/ATP-NAD kinase; | 2e-14 | |
PLN02935 | 508 | PLN02935, PLN02935, Bifunctional NADH kinase/NAD(+) kin | 1e-10 | |
PLN02727 | 986 | PLN02727, PLN02727, NAD kinase | 3e-08 | |
PRK00561 | 259 | PRK00561, ppnK, inorganic polyphosphate/ATP-NAD kinase; | 6e-05 | |
PRK04539 | 296 | PRK04539, ppnK, inorganic polyphosphate/ATP-NAD kinase; | 3e-15 | |
PRK14076 | 569 | PRK14076, pnk, inorganic polyphosphate/ATP-NAD kinase; | 6e-15 | |
PRK01231 | 295 | PRK01231, ppnK, inorganic polyphosphate/ATP-NAD kinase; | 3e-14 | |
PRK02645 | 305 | PRK02645, ppnK, inorganic polyphosphate/ATP-NAD kinase; | 4e-14 | |
PRK01911 | 292 | PRK01911, ppnK, inorganic polyphosphate/ATP-NAD kinase; | 6e-14 | |
PRK03378 | 292 | PRK03378, ppnK, inorganic polyphosphate/ATP-NAD kinase; | 2e-13 | |
PRK14077 | 287 | PRK14077, pnk, inorganic polyphosphate/ATP-NAD kinase; | 1e-12 | |
PRK02649 | 305 | PRK02649, ppnK, inorganic polyphosphate/ATP-NAD kinase; | 2e-12 | |
PRK04885 | 265 | PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase; | 4e-09 | |
PRK03501 | 264 | PRK03501, ppnK, inorganic polyphosphate/ATP-NAD kinase; | 1e-08 | |
KOG4180 | 395 | KOG4180, KOG4180, KOG4180, Predicted kinase [General fu | 0.004 |
>gnl|CDD|179876 PRK04761, ppnK, inorganic polyphosphate/ATP-NAD kinase; Reviewed | Back alignment and domain information |
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>gnl|CDD|144927 pfam01513, NAD_kinase, ATP-NAD kinase | Back alignment and domain information |
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>gnl|CDD|184489 PRK14075, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|179573 PRK03372, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|167337 PRK02231, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|179379 PRK02155, ppnK, NAD(+)/NADH kinase family protein; Provisional | Back alignment and domain information |
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>gnl|CDD|30410 COG0061, COG0061, Predicted sugar kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
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>gnl|CDD|179635 PRK03708, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|37389 KOG2178, KOG2178, KOG2178, Predicted sugar kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
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>gnl|CDD|179241 PRK01185, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|178523 PLN02935, PLN02935, Bifunctional NADH kinase/NAD(+) kinase | Back alignment and domain information |
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>gnl|CDD|178328 PLN02727, PLN02727, NAD kinase | Back alignment and domain information |
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>gnl|CDD|100598 PRK00561, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|179862 PRK04539, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|184490 PRK14076, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|179257 PRK01231, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|179455 PRK02645, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|179352 PRK01911, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|179574 PRK03378, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|172567 PRK14077, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|179456 PRK02649, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|179889 PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|179584 PRK03501, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>gnl|CDD|39382 KOG4180, KOG4180, KOG4180, Predicted kinase [General function prediction only] | Back alignment and domain information |
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Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
Identity | Alignment graph | Length | Definition | Probability |
Target | 264 | inorganic polyphosphate/ATP-NAD kinase [Candidatus Libe | ||
PRK04761 | 246 | ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed | 100.0 | |
PRK02649 | 305 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 100.0 | |
PRK03378 | 292 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 100.0 | |
PRK04759 | 294 | consensus | 100.0 | |
PRK02155 | 291 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 100.0 | |
PRK01231 | 296 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 100.0 | |
PRK04539 | 296 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 100.0 | |
PRK01911 | 290 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 100.0 | |
PRK00561 | 259 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 100.0 | |
PRK03372 | 303 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 100.0 | |
PRK04885 | 265 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 100.0 | |
PRK02645 | 304 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 100.0 | |
PRK03501 | 264 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 100.0 | |
PRK03708 | 278 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 100.0 | |
PRK01185 | 272 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 100.0 | |
PRK02231 | 272 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provisiona | 100.0 | |
COG0061 | 281 | nadF NAD kinase [Coenzyme metabolism] | 100.0 | |
pfam01513 | 243 | NAD_kinase ATP-NAD kinase. Members of this family inclu | 100.0 | |
KOG2178 | 409 | consensus | 100.0 | |
PRK11914 | 304 | diacylglycerol kinase; Reviewed | 98.02 | |
PRK13337 | 305 | putative lipid kinase; Reviewed | 98.01 | |
PRK13055 | 334 | putative lipid kinase; Reviewed | 97.94 | |
PRK12361 | 546 | hypothetical protein; Provisional | 97.41 | |
PRK13054 | 299 | lipid kinase; Reviewed | 97.35 | |
PRK00861 | 296 | putative lipid kinase; Reviewed | 97.31 | |
COG1597 | 301 | LCB5 Sphingosine kinase and enzymes related to eukaryot | 96.72 | |
PRK13057 | 287 | putative lipid kinase; Reviewed | 96.13 | |
KOG4180 | 395 | consensus | 99.81 | |
TIGR00147 | 316 | TIGR00147 conserved hypothetical protein TIGR00147; Int | 96.98 | |
TIGR02482 | 302 | PFKA_ATP 6-phosphofructokinase; InterPro: IPR012828 6-p | 97.55 | |
TIGR02483 | 339 | PFK_mixed phosphofructokinase; InterPro: IPR012829 Memb | 97.53 | |
PRK13059 | 294 | putative lipid kinase; Reviewed | 97.48 | |
COG3199 | 355 | Predicted inorganic polyphosphate/ATP-NAD kinase [Gener | 97.17 | |
PRK03202 | 323 | 6-phosphofructokinase; Provisional | 96.41 | |
cd00763 | 317 | Bacterial_PFK Phosphofructokinase, a key regulatory enz | 95.94 | |
PRK06555 | 403 | pyrophosphate--fructose-6-phosphate 1-phosphotransferas | 95.77 | |
COG0205 | 347 | PfkA 6-phosphofructokinase [Carbohydrate transport and | 95.44 | |
PTZ00286 | 486 | 6-phospho-1-fructokinase; Provisional | 95.04 | |
cd00363 | 338 | PFK Phosphofructokinase, a key regulatory enzyme in gly | 94.96 | |
PRK06830 | 442 | diphosphate--fructose-6-phosphate 1-phosphotransferase; | 94.87 | |
cd00764 | 762 | Eukaryotic_PFK Phosphofructokinase, a key regulatory en | 94.66 | |
cd00764 | 762 | Eukaryotic_PFK Phosphofructokinase, a key regulatory en | 94.37 | |
pfam00365 | 279 | PFK Phosphofructokinase. | 95.85 | |
smart00046 | 124 | DAGKc Diacylglycerol kinase catalytic domain (presumed) | 93.34 | |
pfam00781 | 127 | DAGK_cat Diacylglycerol kinase catalytic domain. Diacyl | 92.55 | |
PRK08250 | 235 | glutamine amidotransferase; Provisional | 90.16 | |
PRK13143 | 201 | hisH imidazole glycerol phosphate synthase subunit HisH | 92.42 | |
PRK13146 | 208 | hisH imidazole glycerol phosphate synthase subunit HisH | 90.19 |
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed | Back alignment and domain information |
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>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>PRK04759 consensus | Back alignment and domain information |
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>PRK02155 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
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>COG0061 nadF NAD kinase [Coenzyme metabolism] | Back alignment and domain information |
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>pfam01513 NAD_kinase ATP-NAD kinase | Back alignment and domain information |
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>KOG2178 consensus | Back alignment and domain information |
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>PRK11914 diacylglycerol kinase; Reviewed | Back alignment and domain information |
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>PRK13337 putative lipid kinase; Reviewed | Back alignment and domain information |
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>PRK13055 putative lipid kinase; Reviewed | Back alignment and domain information |
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>PRK12361 hypothetical protein; Provisional | Back alignment and domain information |
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>PRK13054 lipid kinase; Reviewed | Back alignment and domain information |
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>PRK00861 putative lipid kinase; Reviewed | Back alignment and domain information |
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>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only] | Back alignment and domain information |
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>PRK13057 putative lipid kinase; Reviewed | Back alignment and domain information |
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>KOG4180 consensus | Back alignment and domain information |
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>TIGR00147 TIGR00147 conserved hypothetical protein TIGR00147; InterPro: IPR005218 Although the proteins in this group all contain the diacylglycerol kinase catalytic domain, their function is, as yet, unknown | Back alignment and domain information |
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>TIGR02482 PFKA_ATP 6-phosphofructokinase; InterPro: IPR012828 6-phosphofructokinase (2 | Back alignment and domain information |
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>TIGR02483 PFK_mixed phosphofructokinase; InterPro: IPR012829 Members of this family that are characterised, save one, are phosphofructokinases dependent on pyrophosphate (2 | Back alignment and domain information |
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>PRK13059 putative lipid kinase; Reviewed | Back alignment and domain information |
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>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only] | Back alignment and domain information |
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>PRK03202 6-phosphofructokinase; Provisional | Back alignment and domain information |
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>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate | Back alignment and domain information |
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>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated | Back alignment and domain information |
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>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
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>PTZ00286 6-phospho-1-fructokinase; Provisional | Back alignment and domain information |
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>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate | Back alignment and domain information |
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>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional | Back alignment and domain information |
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>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate | Back alignment and domain information |
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>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate | Back alignment and domain information |
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>pfam00365 PFK Phosphofructokinase | Back alignment and domain information |
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>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed) | Back alignment and domain information |
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>pfam00781 DAGK_cat Diacylglycerol kinase catalytic domain | Back alignment and domain information |
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>PRK08250 glutamine amidotransferase; Provisional | Back alignment and domain information |
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>PRK13143 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
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>PRK13146 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
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Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch
Homologous Structures Detected by PSI-BLAST against Nonredundant Database
Identity | Alignment graph | Length | Definition | E-value |
Target | 264 | inorganic polyphosphate/ATP-NAD kinase [Candidatus Libe | ||
1y3h_A | 307 | Crystal Structure Of Inorganic PolyphosphateATP-Nad | 2e-24 | |
1u0r_A | 307 | Crystal Structure Of Mycobacterium Tuberculosis Nad | 2e-24 | |
2an1_A | 292 | Structural Genomics, The Crystal Structure Of A Put | 1e-21 | |
1yt5_A | 258 | Crystal Structure Of Nad Kinase From Thermotoga Mar | 2e-21 | |
2i1w_A | 272 | Crystal Structure Of Nad Kinase 1 From Listeria Mon | 3e-18 | |
2q5f_A | 272 | Crystal Structure Of Lmnadk1 From Listeria Monocyto | 4e-18 | |
2i2f_A | 272 | Crystal Structure Of Lmnadk1 Length = 272 | 4e-17 | |
3pfn_A | 365 | Crystal Structure Of Human Nad Kinase Length = 365 | 3e-16 | |
1suw_A | 249 | Crystal Structure Of A Nad Kinase From Archaeoglobu | 4e-16 | |
1z0s_A | 278 | Crystal Structure Of An Nad Kinase From Archaeoglob | 5e-16 | |
3afo_A | 388 | Crystal Structure Of Yeast Nadh Kinase Complexed Wi | 1e-14 |
>gi|60594102|pdb|1Y3H|A Chain A, Crystal Structure Of Inorganic PolyphosphateATP-Nad Kinase From Mycobacterium Tuberculosis Length = 307 | Back alignment and structure |
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 12/237 (5%) Query: 30 GNSTSEEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFL--MNEYCIENLVERL 87 ++ ++++VLGGDG L++ ++ P+ G+N G +GFL I+ ++E + Sbjct: 69 DQHAADGCELVLVLGGDGTFLRAAELARNASIPVLGVNLGRIGFLAEAEAEAIDAVLEHV 128 Query: 88 SVAVECTFHPLKMTVFDYDNSICAENILAINEVSIIRKPGQNQLVQAAKLEVKVDDQVRL 147 L + V A+NEVS+ + P L ++ D + Sbjct: 129 VAQDYRVEDRLTLDVVVRQGGRIVNRGWALNEVSLEKGPRLGVLGVVVEI-----DGRPV 183 Query: 148 PELVCDGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSPFKPRRWHGAILPNDVMIE 207 CDG++VSTP GSTAY FSA GP+L + +L+ P + P I Sbjct: 184 SAFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFGRPMVTSPE-ATIA 242 Query: 208 IQVLEHKQRPVIATADRLA--IEPVSRINVTQSSDITMRILSDSHRSWSDRILTAQF 262 I++ ++ R I SR+ VT+ +++ ++DR++ +F Sbjct: 243 IEIEADGHDALVFCDGRREMLIPAGSRLEVTR-CVTSVKWARLDSAPFTDRLVR-KF 297 |
gi|52695960|pdb|1U0R|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Nad Kinase Length = 307 | Back alignment and structure |
gi|78101385|pdb|2AN1|A Chain A, Structural Genomics, The Crystal Structure Of A Putative Kinase From Salmonella Typhimurim Lt2 Length = 292 | Back alignment and structure |
gi|62738751|pdb|1YT5|A Chain A, Crystal Structure Of Nad Kinase From Thermotoga Maritima Length = 258 | Back alignment and structure |
>gi|157835148|pdb|2I1W|A Chain A, Crystal Structure Of Nad Kinase 1 From Listeria Monocytogenes Length = 272 | Back alignment and structure |
>gi|157835831|pdb|2Q5F|A Chain A, Crystal Structure Of Lmnadk1 From Listeria Monocytogenes Length = 272 | Back alignment and structure |
>gi|157835158|pdb|2I2F|A Chain A, Crystal Structure Of Lmnadk1 Length = 272 | Back alignment and structure |
>gi|311772317|pdb|3PFN|A Chain A, Crystal Structure Of Human Nad Kinase Length = 365 | Back alignment and structure |
gi|52695575|pdb|1SUW|A Chain A, Crystal Structure Of A Nad Kinase From Archaeoglobus Fulgidus In Complex With Its Substrate And Product: Insights Into The Catalysis Of Nad Kinase Length = 249 | Back alignment and structure |
>gi|66361279|pdb|1Z0S|A Chain A, Crystal Structure Of An Nad Kinase From Archaeoglobus Fulgidus In Complex With Atp Length = 278 | Back alignment and structure |
>gi|326327788|pdb|3AFO|A Chain A, Crystal Structure Of Yeast Nadh Kinase Complexed With Nadh Length = 388 | Back alignment and structure |
Homologous Structures in PDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 264 | inorganic polyphosphate/ATP-NAD kinase [Candidatus Libe | ||
3pfn_A | 365 | NAD kinase; structural genomics consortium, SNP, SGC, t | 1e-35 | |
2i2c_A | 272 | Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP | 5e-33 | |
1z0s_A | 278 | Probable inorganic polyphosphate/ATP-NAD kinase; ATP-bi | 1e-26 | |
1yt5_A | 258 | Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha | 5e-21 | |
1u0t_A | 307 | Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, bet | 3e-20 | |
2an1_A | 292 | Putative kinase; structural genomics, PSI, protein stru | 3e-20 |
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens} Length = 365 | Back alignment and structure |
---|
Score = 145 bits (366), Expect = 1e-35 Identities = 59/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%) Query: 34 SEEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFLMN------EYCIENLVE-- 85 S + D I+ LGGDG +L + + P+ + GS+GFL + + ++E Sbjct: 106 SNQIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGN 165 Query: 86 -------RLSVAVECTFHPLKMTV-------------FDYDNSICAENILAINEVSIIRK 125 RL V V K V D D A +NEV I R Sbjct: 166 AAVVLRSRLKVRVVKELRGKKTAVHNGLGEKGSQAAGLDMDVGKQAMQYQVLNEVVIDRG 225 Query: 126 PGQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPLESRHLLLT 185 P + ++V +D + + + DG++VSTP GSTAY +A ++ +++T Sbjct: 226 PSS----YLSNVDVYLDGHL-ITTVQGDGVIVSTPTGSTAYAAAAGASMIHPNVPAIMIT 280 Query: 186 PVSPFKPRRWHGAILPNDVMIEIQVLEHKQRPVIATAD---RLAIEPVSRINVTQSS-DI 241 P+ P + ++P V ++I + + + D R I I++T S + Sbjct: 281 PICPHSL-SFRPIVVPAGVELKIMLSPEARNTAWVSFDGRKRQEIRHGDSISITTSCYPL 339 Query: 242 TMRILSDSHRSW 253 + D W Sbjct: 340 PSICVRDPVSDW 351 |
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 2i2f_A* 2q5f_A* Length = 272 | Back alignment and structure |
---|
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A* Length = 278 | Back alignment and structure |
---|
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} Length = 258 | Back alignment and structure |
---|
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A Length = 307 | Back alignment and structure |
---|
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium LT2} Length = 292 | Back alignment and structure |
---|
Homologous Structures in PDB70 Database Detected by HHsearch
Original result of HHsearch against PDB70 database
Identity | Alignment graph | Length | Definition | Probability |
Target | 264 | inorganic polyphosphate/ATP-NAD kinase [Candidatus Libe | ||
2an1_A | 292 | Putative kinase; structural genomics, PSI, protein stru | 100.0 | |
3pfn_A | 365 | NAD kinase; structural genomics consortium, SNP, SGC, t | 100.0 | |
2i2c_A | 272 | Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP | 100.0 | |
1u0t_A | 307 | Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, bet | 100.0 | |
1yt5_A | 258 | Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha | 100.0 | |
1z0s_A | 278 | Probable inorganic polyphosphate/ATP-NAD kinase; ATP-bi | 100.0 | |
2qv7_A | 337 | Diacylglycerol kinase DGKB; alpha-beta domain 1, beta s | 97.96 | |
2bon_A | 332 | Lipid kinase; DAG kinase, ATP-binding, transferase; 1.9 | 97.24 | |
1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two do | 96.48 | |
2a9v_A | 212 | GMP synthase; NP_394403.1, , structural genomics, joint | 91.23 | |
3opy_A | 989 | 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fr | 95.36 | |
3pfk_A | 319 | Phosphofructokinase; transferase(phosphotransferase); 2 | 95.12 | |
1zxx_A | 319 | 6-phosphofructokinase; allosteric regulation, lactobaci | 94.99 | |
2hig_A | 487 | 6-phospho-1-fructokinase; transferase; 2.40A {Trypanoso | 94.95 | |
1pfk_A | 320 | Phosphofructokinase; transferase(phosphotransferase); H | 94.65 | |
3hno_A | 419 | Pyrophosphate-dependent phosphofructokinase; structural | 94.46 | |
3opy_B | 941 | 6-phosphofructo-1-kinase beta-subunit; ATP binding, fru | 93.53 | |
3opy_B | 941 | 6-phosphofructo-1-kinase beta-subunit; ATP binding, fru | 93.29 | |
3opy_A | 989 | 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fr | 93.28 | |
2f48_A | 555 | Diphosphate--fructose-6-phosphate 1- phosphotransferase | 92.76 | |
3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural genomic | 90.25 |
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium LT2} | Back alignment and structure |
---|
Probab=100.00 E-value=0 Score=431.84 Aligned_cols=253 Identities=23% Similarity=0.358 Sum_probs=214.3 Q ss_pred CCCCCEEEEEEECC-CHHHHHHHHHHHHHCCCC--------------------------CHHHCCEEEEECCCHHHHHHH Q ss_conf 98765059999559-989999999999870788--------------------------845577999987954899999 Q gi|254780754|r 1 MDRNIQKIHFKASN-AKKAQEAYDKFVKIYGNS--------------------------TSEEADVIVVLGGDGFMLQSF 53 (264) Q Consensus 1 m~~~~~ki~i~~~~-~~~a~~~~~~l~~~~~~~--------------------------~~~~~Dlii~iGGDGT~L~a~ 53 (264) |.+.+|+|+++++. .+.+.++++++.+++.+. ..+++|++|++|||||||+|+ T Consensus 1 M~~~~k~Igiv~~~~~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~iGGDGT~L~a~ 80 (292) T 2an1_A 1 MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGGDGNMLGAA 80 (292) T ss_dssp ---CCCEEEEECC-------CHHHHHHHHHHHTTCEEEEEHHHHHHTTCSSCCEECHHHHHHHCSEEEECSCHHHHHHHH T ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECHHHHHHCCCCCCCCCCHHHCCCCCCEEEEECCCHHHHHHH T ss_conf 99779589999539998999999999999997889999968888664877777554445055777899992685799999 Q ss_pred HHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEC---CCCCCCEEEEEEEEEEEEECCCCCC Q ss_conf 9974128729941534332010445878999866420124320344345421---2444420157753479972687642 Q gi|254780754|r 54 HQSKEYDKPIYGMNCGSVGFLMNEYCIENLVERLSVAVECTFHPLKMTVFDY---DNSICAENILAINEVSIIRKPGQNQ 130 (264) Q Consensus 54 ~~~~~~~~PilGIn~G~lGFL~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~AlNEi~i~r~~~~~~ 130 (264) |.+.+.++||+|||+|++|||+ +++++++.+.+.++..+.+..+++..+.. ......+.++||||++|.|+... T Consensus 81 ~~~~~~~~PilGIn~G~lGFL~-~~~~~~~~~~l~~~~~g~~~~~~r~~l~~~~~~~~~~~~~~~AlNdvvi~~~~~~-- 157 (292) T 2an1_A 81 RTLARYDINVIGINRGNLGFLT-DLDPDNALQQLSDVLEGRYISEKRFLLEAQVCQQDRQKRISTAINEVVLHPGKVA-- 157 (292) T ss_dssp HHHTTSSCEEEEBCSSSCCSSC-CBCTTSHHHHHHHHHTTCEEEEEEEEEEEEEECC----CEEEESSEEEEEESSTT-- T ss_pred HHHCCCCCCEEEEECCCCEEEE-ECCCHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCHHHHHHHEEEEECCCCCC-- T ss_conf 9837689838987658842477-3361138999999873673132344567776411110000212015540268853-- Q ss_pred EEEEEEEEEEECCEEEEEEEECCEEEEECCCCHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEE Q ss_conf 36788898766787653121035079822665044675229817740886058630354330111100278841489997 Q gi|254780754|r 131 LVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSPFKPRRWHGAILPNDVMIEIQV 210 (264) Q Consensus 131 ~~~~~~~~v~id~~~~~~~~~~DGvivSTptGSTAY~lSaGGpIv~p~~~~~~itpI~p~~l~~~rplVl~~~~~I~i~i 210 (264) +++++++++||++ +.+|+|||+||||||||||||+||||||++|+++++++||||||+++. ||+|+|++++|++++ T Consensus 158 --~~~~~~v~id~~~-~~~~~gDGlIvSTptGSTAY~lSaGGpIv~p~~~~~~itpI~p~~l~~-rplV~~~~~~i~i~~ 233 (292) T 2an1_A 158 --HMIEFEVYIDETF-AFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSA-RPLVINSSSTIRLRF 233 (292) T ss_dssp --CCEEEEEEETTEE-EEEEEESEEEEECTGGGGTHHHHTTCCEECTTCSEEEEEEESCSSTTC-CCEEEETTCCEEEEE T ss_pred --EEEEEEEEECCCC-CEEECCCCEEECCCCCHHHHHHHCCCCCCCCCHHEEEEEECCCCCCCC-CCCCCCCCEEEEEEE T ss_conf --3799999845621-447745889998667657999768997427312004531225766667-970249963999997 Q ss_pred CCCCCCEEEEEECCE---ECCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHCC Q ss_conf 487887589998898---81487789999879951899964888899988887517 Q gi|254780754|r 211 LEHKQRPVIATADRL---AIEPVSRINVTQSSDITMRILSDSHRSWSDRILTAQFS 263 (264) Q Consensus 211 ~~~~~~~~~~~~D~~---~~~~~~~i~I~~s~~~~~~li~~~~~~f~~ril~~kF~ 263 (264) .. ..+++.++.||+ ++.+++.|+|++|+ ..++++++++++||++ |++||. T Consensus 234 ~~-~~~~~~l~~DG~~~~~l~~gd~I~I~~s~-~~~~lv~~~~~~f~~~-L~~KL~ 286 (292) T 2an1_A 234 SH-RRSDLEISCDSQIALPIQEGEDVLIRRCD-YHLNLIHPKDYSYFNT-LSTKLG 286 (292) T ss_dssp CC----CEEEEETTSCCEEECTTCEEEEEEEE-EEEEEEEETTCCHHHH-HHHHHT T ss_pred CC-CCCCEEEEEECCCCEEECCCCEEEEEECC-CEEEEEECCCCCHHHH-HHHHCC T ss_conf 48-99878999938800870899799999899-8799998299999999-987778 |
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens} | Back alignment and structure |
---|
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 2i2f_A* 2q5f_A* | Back alignment and structure |
---|
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A | Back alignment and structure |
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>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} | Back alignment and structure |
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>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A* | Back alignment and structure |
---|
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP complex, transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A | Back alignment and structure |
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>2bon_A Lipid kinase; DAG kinase, ATP-binding, transferase; 1.9A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A | Back alignment and structure |
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>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
---|
>2a9v_A GMP synthase; NP_394403.1, , structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1 | Back alignment and structure |
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>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} | Back alignment and structure |
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>3pfk_A Phosphofructokinase; transferase(phosphotransferase); 2.40A {Geobacillus stearothermophilus} SCOP: c.89.1.1 PDB: 4pfk_A* 6pfk_A 1mto_A* | Back alignment and structure |
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>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus bulgaricus, transferase; 1.85A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
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>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* | Back alignment and structure |
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>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A | Back alignment and structure |
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>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A | Back alignment and structure |
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>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} | Back alignment and structure |
---|
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} | Back alignment and structure |
---|
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} | Back alignment and structure |
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>2f48_A Diphosphate--fructose-6-phosphate 1- phosphotransferase; HET: FBP; 2.11A {Borrelia burgdorferi B31} SCOP: c.89.1.1 PDB: 1kzh_A* | Back alignment and structure |
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>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, infectious diseases, isomerase, center for structural genomics of infectious diseases; 2.35A {Vibrio cholerae} | Back alignment and structure |
---|
Homologous Domains in SCOP and MMDB Database
Detected by RPS-BLAST and HHsearch
Homologous Domains in SCOP70 (Version1.75) Database Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
Identity | Alignment graph | Length | Definition | E-value |
264 | inorganic polyphosphate/ATP-NAD kinase [Candidatus Libe | |||
d1z0sa1 | 249 | e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kina | 1e-24 | |
d1u0ta_ | 302 | e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase Pp | 2e-21 |
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]} Length = 249 | Back information, alignment and structure |
---|
class: Multi-domain proteins (alpha and beta) fold: NAD kinase/diacylglycerol kinase-like superfamily: NAD kinase/diacylglycerol kinase-like family: NAD kinase-like domain: Inorganic polyphosphate/ATP-NAD kinase PpnK species: Archaeoglobus fulgidus [TaxId: 2234] Score = 107 bits (267), Expect = 1e-24 Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 23/249 (9%) Query: 8 IHFKASNAKKAQEAYDKF---VKIYGNSTS--EEADVIVVLGGDGFMLQSFHQSKEYDKP 62 ++ + K+ +EA + V+++ + E D IV +GGDG +L+ + K P Sbjct: 6 VYKTDGHVKRIEEALKRLEVEVELFNQPSEELENFDFIVSVGGDGTILRILQKLK-RCPP 64 Query: 63 IYGMNCGSVGFLMNEYCIENLVERLSVAVECTFHPLKMTVFDYDNSICAENILAINEVSI 122 I+G+N G VG L + E V ++ ++ F + ++LA+NE+++ Sbjct: 65 IFGINTGRVGLLTHAS-----PENFEVELKKAVEKFEVERFPRVSCSAMPDVLALNEIAV 119 Query: 123 IRKPGQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPLESRHL 182 + + + D V + + CDG +V+T IGST Y FSA GP++ Sbjct: 120 LSRKPAKMIDV-----ALRVDGVEVDRIRCDGFIVATQIGSTGYAFSAGGPVVEPYLECF 174 Query: 183 LLTPVSPFKPRRWHGAILPNDVMIEIQVLEHKQRPVIATAD-RLAIEPVSRINVTQSSDI 241 +L P++PF W ++ + IE+ I AD + +++ I + +S Sbjct: 175 ILIPIAPF-RFGWKPYVVSMERKIEVIA-----EKAIVVADGQKSVDFDGEITIEKSEFP 228 Query: 242 TMRILSDSH 250 + ++ Sbjct: 229 AVFFKNEKR 237 |
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} Length = 302 | Back information, alignment and structure |
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Homologous Domains in SCOP70 (Version 1.75) Database Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
Identity | Alignment graph | Length | Definition | Probability |
Target | 264 | inorganic polyphosphate/ATP-NAD kinase [Candidatus Libe | ||
d1u0ta_ | 302 | Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacter | 100.0 | |
d1z0sa1 | 249 | Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglo | 100.0 | |
d2qv7a1 | 312 | Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxI | 97.9 | |
d2bona1 | 295 | Lipid kinase YegS {Escherichia coli [TaxId: 562]} | 97.32 | |
d4pfka_ | 319 | ATP-dependent phosphofructokinase {Bacillus stearotherm | 94.65 | |
d1pfka_ | 320 | ATP-dependent phosphofructokinase {Escherichia coli [Ta | 94.26 | |
d2f48a1 | 550 | Pyrophosphate-dependent phosphofructokinase {Lyme disea | 93.81 | |
d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus thermophil | 90.32 | |
d2a9va1 | 196 | GMP synthase subunit A, GuaAA {Archaeon Thermoplasma ac | 92.6 |
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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class: Multi-domain proteins (alpha and beta) fold: NAD kinase/diacylglycerol kinase-like superfamily: NAD kinase/diacylglycerol kinase-like family: NAD kinase-like domain: Inorganic polyphosphate/ATP-NAD kinase PpnK species: Mycobacterium tuberculosis [TaxId: 1773] Probab=100.00 E-value=0 Score=416.69 Aligned_cols=248 Identities=25% Similarity=0.396 Sum_probs=206.1 Q ss_pred EEEEEEEC-CCHHHHHHHHHHHHHCCCC---------------------------------------CHHHCCEEEEECC Q ss_conf 05999955-9989999999999870788---------------------------------------8455779999879 Q gi|254780754|r 6 QKIHFKAS-NAKKAQEAYDKFVKIYGNS---------------------------------------TSEEADVIVVLGG 45 (264) Q Consensus 6 ~ki~i~~~-~~~~a~~~~~~l~~~~~~~---------------------------------------~~~~~Dlii~iGG 45 (264) +|+.++.+ ..+++.+.++++.+++.+. ..+++|++|++|| T Consensus 1 r~v~lv~~~~k~~a~~~a~~i~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~lGG 80 (302) T d1u0ta_ 1 RSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLVLGG 80 (302) T ss_dssp CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CCCEEEEEC T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEECC T ss_conf 98999970989899999999999999789989998420001464445711343227642113553233346558999758 Q ss_pred CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEE---EECCCCCCCEEEEEEEEEEE Q ss_conf 548999999974128729941534332010445878999866420124320344345---42124444201577534799 Q gi|254780754|r 46 DGFMLQSFHQSKEYDKPIYGMNCGSVGFLMNEYCIENLVERLSVAVECTFHPLKMTV---FDYDNSICAENILAINEVSI 122 (264) Q Consensus 46 DGT~L~a~~~~~~~~~PilGIn~G~lGFL~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~AlNEi~i 122 (264) |||||+|+|.+.+.++||||||+|+||||+ +++++++.+.+.+...+.+..+++.. ...+++......+||||++| T Consensus 81 DGT~L~a~~~~~~~~~PilGin~G~lGFL~-~~~~~~~~~~l~~~~~g~~~~~~r~~l~~~~~~~~~~~~~~~alNdvvi 159 (302) T d1u0ta_ 81 DGTFLRAAELARNASIPVLGVNLGRIGFLA-EAEAEAIDAVLEHVVAQDYRVEDRLTLDVVVRQGGRIVNRGWALNEVSL 159 (302) T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSCCSSC-SEEGGGHHHHHHHHHHTCCEEEEECCEEEEEEETTEEEEEEEESSEEEE T ss_pred CHHHHHHHHHHHCCCCEEEEECCCCCCEEC-CCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEEHHHHHHHHC T ss_conf 739999999740039828983788630541-4545678999999874476201100122576169804520333201102 Q ss_pred EECCCCCCEEEEEEEEEEECCEEEEEEEECCEEEEECCCCHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHCCCCC Q ss_conf 72687642367888987667876531210350798226650446752298177408860586303543301111002788 Q gi|254780754|r 123 IRKPGQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSPFKPRRWHGAILPN 202 (264) Q Consensus 123 ~r~~~~~~~~~~~~~~v~id~~~~~~~~~~DGvivSTptGSTAY~lSaGGpIv~p~~~~~~itpI~p~~l~~~rplVl~~ 202 (264) .|+... +++.+++++||++ +++|+|||+||||||||||||+||||||++|++++|++||||||+++. ||+|+|+ T Consensus 160 ~~~~~~----~~~~~~v~i~~~~-~~~~~~DGlivSTPtGSTAYslSaGGPIv~p~~~~i~vtpi~p~sl~~-rplVl~~ 233 (302) T d1u0ta_ 160 EKGPRL----GVLGVVVEIDGRP-VSAFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFG-RPMVTSP 233 (302) T ss_dssp ECSSSS----SCEEEEEESSSSE-EEEEEESEEEEECTGGGGTHHHHTTCCEECTTCCCEEEEEESCSSSCC-CCEEECT T ss_pred CCCCCC----CEEEEEEEECCEE-EEEEECCEEEEEHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEECC T ss_conf 357654----4246899961325-788612418984142057401205686444334222101134423567-4388669 Q ss_pred CCEEEEEECCCCCCEEEEEECCE---ECCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHCC Q ss_conf 41489997487887589998898---81487789999879951899964888899988887517 Q gi|254780754|r 203 DVMIEIQVLEHKQRPVIATADRL---AIEPVSRINVTQSSDITMRILSDSHRSWSDRILTAQFS 263 (264) Q Consensus 203 ~~~I~i~i~~~~~~~~~~~~D~~---~~~~~~~i~I~~s~~~~~~li~~~~~~f~~ril~~kF~ 263 (264) +++|++++.... +++.++.||+ ++.++++|.|++|+ .++++++..+++||++ +++||. T Consensus 234 ~~~i~i~~~~~~-~~~~v~~DG~~~~~l~~~d~I~I~~s~-~~~~lv~~~~~~f~~~-l~~Kl~ 294 (302) T d1u0ta_ 234 EATIAIEIEADG-HDALVFCDGRREMLIPAGSRLEVTRCV-TSVKWARLDSAPFTDR-LVRKFR 294 (302) T ss_dssp TCCEEEEECTTS-CCEEEEETTTEEEEECTTCEEEEEECS-SCEEEEECSCCCHHHH-HHHHHT T ss_pred CCEEEEEEECCC-CCEEEEEECCCCEEECCCCEEEEEECC-CEEEEEEECCCCHHHH-HHHHCC T ss_conf 848999981489-878999989955870899799999889-8899998189998999-999759 |
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
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>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
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>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} | Back information, alignment and structure |
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>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
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Homologous Domains in MMDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against MMDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 264 | inorganic polyphosphate/ATP-NAD kinase [Candidatus | ||
2i2c_A_94-250 | 157 | (A:94-250) Probable inorganic polyphosphate/ATP-NA | 6e-25 | |
1yt5_A_79-240 | 162 | (A:79-240) Inorganic polyphosphate/ATP-NAD kinase; | 2e-22 | |
2an1_A_128-264 | 137 | (A:128-264) Putative kinase; structural genomics, | 7e-21 | |
1u0t_A_140-276 | 137 | (A:140-276) Inorganic polyphosphate/ATP-NAD kinase | 1e-20 | |
1z0s_A_131-255 | 125 | (A:131-255) Probable inorganic polyphosphate/ATP-N | 3e-17 | |
1z0s_A_1-130_256-265 | 140 | (A:1-130,A:256-265) Probable inorganic polyphospha | 4e-16 | |
2i2c_A_1-93 | 93 | (A:1-93) Probable inorganic polyphosphate/ATP-NAD | 2e-14 | |
1u0t_A_1-139_277-286 | 149 | (A:1-139,A:277-286) Inorganic polyphosphate/ATP-NA | 3e-14 | |
1yt5_A_1-78 | 78 | (A:1-78) Inorganic polyphosphate/ATP-NAD kinase; d | 3e-11 | |
2an1_A_1-127_265-275 | 138 | (A:1-127,A:265-275) Putative kinase; structural ge | 9e-09 |
>2i2c_A (A:94-250) Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 2i2f_A* 2q5f_A*Length = 157 | Back alignment and structure |
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Score = 108 bits (272), Expect = 6e-25 Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 12/156 (7%) Query: 98 LKMTVFDYDNSICAENILAINEVSIIRKPGQNQLVQAAKLEVKVDDQVRLPELVCDGLVV 157 LK TV A LA+NE ++ ++V ++D DGL + Sbjct: 10 LKTTVKYGIGKKEATY-LALNESTVKSSG------GPFVVDVVINDI-HFERFRGDGLCM 61 Query: 158 STPIGSTAYNFSALGPILPLESRHLLLTPVSPFKPRRWHGA----ILPNDVMIEIQVLEH 213 STP G+TAYN S G ++ + LT ++ R + + P ++ +Q + Sbjct: 62 STPSGTTAYNKSLGGALMHPSIEAMQLTEMASINNRVYRTIGSPLVFPKHHVVSLQPVND 121 Query: 214 KQRPVIATADRLAIEPVSRINVTQSSDITMRILSDS 249 K + + V I S+ S Sbjct: 122 KDFQISVDHLSILHRDVQEIRYEVSAKKIHFARFRS 157 |
>1yt5_A (A:79-240) Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}Length = 162 | Back alignment and structure |
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>2an1_A (A:128-264) Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium LT2}Length = 137 | Back alignment and structure |
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>1u0t_A (A:140-276) Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis}Length = 137 | Back alignment and structure |
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>1z0s_A (A:131-255) Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus}Length = 125 | Back alignment and structure |
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>1z0s_A (A:1-130,A:256-265) Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus}Length = 140 | Back alignment and structure |
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>2i2c_A (A:1-93) Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 2i2f_A* 2q5f_A*Length = 93 | Back alignment and structure |
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>1u0t_A (A:1-139,A:277-286) Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis}Length = 149 | Back alignment and structure |
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>1yt5_A (A:1-78) Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}Length = 78 | Back alignment and structure |
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>2an1_A (A:1-127,A:265-275) Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium LT2}Length = 138 | Back alignment and structure |
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Homologous Domains in MMDB70 Database Detected by HHsearch
Original result of HHsearch against MMDB70 database
Identity | Alignment graph | Length | Definition | Probability |
Target | 264 | inorganic polyphosphate/ATP-NAD kinase [Candidatus Libe | ||
1yt5_A_79-240 | 162 | Inorganic polyphosphate/ATP-NAD kinase; domain 1: | 100.0 | |
1u0t_A_140-276 | 137 | Inorganic polyphosphate/ATP-NAD kinase; alpha-beta | 100.0 | |
2an1_A_128-264 | 137 | Putative kinase; structural genomics, PSI, protein | 100.0 | |
2i2c_A_94-250 | 157 | Probable inorganic polyphosphate/ATP-NAD kinase 1; | 100.0 | |
1z0s_A_131-255 | 125 | Probable inorganic polyphosphate/ATP-NAD kinase; A | 100.0 | |
2i2c_A_1-93 | 93 | Probable inorganic polyphosphate/ATP-NAD kinase 1; | 99.81 | |
1z0s_A_1-130_256-265 | 140 | Probable inorganic polyphosphate/ATP-NAD kinase; A | 99.76 | |
1u0t_A_1-139_277-286 | 149 | Inorganic polyphosphate/ATP-NAD kinase; alpha-beta | 99.74 | |
2an1_A_1-127_265-275 | 138 | Putative kinase; structural genomics, PSI, protein | 99.62 | |
1yt5_A_1-78 | 78 | Inorganic polyphosphate/ATP-NAD kinase; domain 1: | 99.6 | |
2qv7_A_1-140 | 140 | Diacylglycerol kinase DGKB; alpha-beta domain 1, b | 97.79 | |
2bon_A_1-143_311-332 | 165 | Lipid kinase; DAG kinase, ATP-binding, transferase | 97.25 | |
3dzc_A_1-196_382-396 | 211 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 95.41 | |
3l83_A_ | 250 | Glutamine amido transferase; structural genomics, | 94.76 | |
2nv0_A_ | 196 | Glutamine amidotransferase subunit PDXT; 3-layer(A | 93.26 | |
1t3t_A_1023-1303 | 281 | Phosphoribosylformylglycinamidine synthase; PURL, | 91.84 | |
1o1y_A_ | 239 | Conserved hypothetical protein TM1158; structural | 91.65 | |
1zxx_A_1-131_253-303 | 182 | 6-phosphofructokinase; allosteric regulation, lact | 96.08 | |
1pfk_A_1-132_254-306 | 185 | Phosphofructokinase; transferase(phosphotransferas | 95.96 | |
3pfk_A_1-131_251-305 | 186 | Phosphofructokinase; transferase(phosphotransferas | 95.64 | |
2hig_A_28-234_388-429 | 249 | 6-phospho-1-fructokinase; transferase; 2.40A {Tryp | 94.88 | |
3hno_A_1-148_302-364 | 211 | Pyrophosphate-dependent phosphofructokinase; struc | 91.6 | |
1v4v_A_1-176_349-376 | 204 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 91.1 | |
2f48_A_1-211_433-504 | 283 | Diphosphate--fructose-6-phosphate 1- phosphotransf | 94.22 |
>1yt5_A (A:79-240) Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} | Back alignment and structure |
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Probab=100.00 E-value=4.5e-41 Score=279.03 Aligned_cols=161 Identities=25% Similarity=0.368 Sum_probs=145.0 Q ss_pred CCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEEEEECCEEEEEEEECCEEE Q ss_conf 45878999866420124320344345421244442015775347997268764236788898766787653121035079 Q gi|254780754|r 77 EYCIENLVERLSVAVECTFHPLKMTVFDYDNSICAENILAINEVSIIRKPGQNQLVQAAKLEVKVDDQVRLPELVCDGLV 156 (264) Q Consensus 77 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~AlNEi~i~r~~~~~~~~~~~~~~v~id~~~~~~~~~~DGvi 156 (264) +++++++.+.|+++.+++|..+++..+.... ..+.++||||++|.|.... +++++++++||++ +++|+||||| T Consensus 2 ~~~~~~~~~~l~~~~~g~~~~~~~~~l~v~~--~~~~~~AlNEv~i~~~~~~----~~~~~~i~id~~~-~~~~~~DGli 74 (162) T 1yt5_A 2 SYTLDEIDRFLEDLRNWNFREETRWFIQIES--ELGNHLALNDVTLERDLSG----KMVEIEVEVEHHS-SMWFFADGVV 74 (162) T ss_dssp CBCGGGHHHHHHHHHTTCCEEEEEEEEEEEE--TTEEEEESSEEEEECCTTS----CCEEEEEEETTSC-CEEEEESEEE T ss_pred CCCHHHHHHHHHHHHHCCCCCEEHHHHCCCC--CHHHHHHHCCCCCCCCCCC----CCEEEEEEEECEE-EEEEEEEEEE T ss_conf 0121347888777750443200000111122--1022455456412368876----5336999981428-9876311499 Q ss_pred EECCCCHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCEECCCCCEEEEE Q ss_conf 82266504467522981774088605863035433011110027884148999748788758999889881487789999 Q gi|254780754|r 157 VSTPIGSTAYNFSALGPILPLESRHLLLTPVSPFKPRRWHGAILPNDVMIEIQVLEHKQRPVIATADRLAIEPVSRINVT 236 (264) Q Consensus 157 vSTptGSTAY~lSaGGpIv~p~~~~~~itpI~p~~l~~~rplVl~~~~~I~i~i~~~~~~~~~~~~D~~~~~~~~~i~I~ 236 (264) |||||||||||+||||||++|++++|++||||||+++ +||+|+|++++|++++. +++.++.||++++++++|+|+ T Consensus 75 VsTptGSTaY~~SagGpii~p~~~~~~itpi~P~~~~-~rp~v~~~~~~i~i~~~----~~~~i~~DG~~l~~~~~i~I~ 149 (162) T 1yt5_A 75 ISTPTGSTAYSLSIGGPIIFPECEVLEISPIAPQFFL-TRSVVIPSNFKVVVESQ----RDINMLVDGVLTGKTKRIEVK 149 (162) T ss_dssp EECTGGGGTTTTTTTCCCCCTTCCEEEEEEESCSTTC-CCCEEEETTSCEEEEEE----EEEEEEETTEEEEEEEEEEEE T ss_pred EECCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCCC-CCCCCCCCCEEEEEECC----CCEEEEEEEEECCCCCEEEEE T ss_conf 8434453267774698531886332789862351013-68877887339999359----984999964793899799999 Q ss_pred ECCCCCEEEEECCC Q ss_conf 87995189996488 Q gi|254780754|r 237 QSSDITMRILSDSH 250 (264) Q Consensus 237 ~s~~~~~~li~~~~ 250 (264) ++. .+++++++++ T Consensus 150 ~s~-~~~~li~~~~ 162 (162) T 1yt5_A 150 KSR-RYVRILRPPE 162 (162) T ss_dssp EEE-EEEEEEECTT T ss_pred ECC-CEEEEEEECC T ss_conf 989-7899998399 |
>1u0t_A (A:140-276) Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
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>2an1_A (A:128-264) Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium LT2} | Back alignment and structure |
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>2i2c_A (A:94-250) Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 2i2f_A* 2q5f_A* | Back alignment and structure |
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>1z0s_A (A:131-255) Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
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>2i2c_A (A:1-93) Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 2i2f_A* 2q5f_A* | Back alignment and structure |
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>1z0s_A (A:1-130,A:256-265) Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
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>1u0t_A (A:1-139,A:277-286) Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
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>2an1_A (A:1-127,A:265-275) Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium LT2} | Back alignment and structure |
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>1yt5_A (A:1-78) Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} | Back alignment and structure |
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>2qv7_A (A:1-140) Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP complex, transferase; HET: ADP; 2.30A {Staphylococcus aureus} | Back alignment and structure |
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>2bon_A (A:1-143,A:311-332) Lipid kinase; DAG kinase, ATP-binding, transferase; 1.9A {Escherichia coli} | Back alignment and structure |
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>3dzc_A (A:1-196,A:382-396) UDP-N-acetylglucosamine 2-epimerase; structural genomics, infectious diseases, isomerase; 2.35A {Vibrio cholerae} | Back alignment and structure |
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>2nv0_A (A:) Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} | Back alignment and structure |
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>1t3t_A (A:1023-1303) Phosphoribosylformylglycinamidine synthase; PURL, FGAM synthetase, PURS, PURQ, formyl glycinamide, ligase; HET: CYG ADP; 1.90A {Salmonella typhimurium} | Back alignment and structure |
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>1o1y_A (A:) Conserved hypothetical protein TM1158; structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.70A {Thermotoga maritima} | Back alignment and structure |
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>1zxx_A (A:1-131,A:253-303) 6-phosphofructokinase; allosteric regulation, lactobacillus bulgaricus, transferase; 1.85A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
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>1pfk_A (A:1-132,A:254-306) Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} | Back alignment and structure |
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>3pfk_A (A:1-131,A:251-305) Phosphofructokinase; transferase(phosphotransferase); 2.40A {Bacillus stearothermophilus} | Back alignment and structure |
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>2hig_A (A:28-234,A:388-429) 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* | Back alignment and structure |
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>3hno_A (A:1-148,A:302-364) Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A | Back alignment and structure |
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>1v4v_A (A:1-176,A:349-376) UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} | Back alignment and structure |
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>2f48_A (A:1-211,A:433-504) Diphosphate--fructose-6-phosphate 1- phosphotransferase; HET: FBP; 2.11A {Borrelia burgdorferi B31} | Back alignment and structure |
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