254780806
chromosome partitioning protein A
GeneID in NCBI database: | 8209812 | Locus tag: | CLIBASIA_03485 |
Protein GI in NCBI database: | 254780806 | Protein Accession: | YP_003065219.1 |
Gene range: | +(449900, 450697) | Protein Length: | 265aa |
Gene description: | chromosome partitioning protein A | ||
COG prediction: | [D] ATPases involved in chromosome partitioning | ||
KEGG prediction: | parA; chromosome partitioning protein A; K03496 chromosome partitioning protein | ||
SEED prediction: | Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj | ||
Pathway involved in KEGG: | not defined | ||
Subsystem involved in SEED: | Bacterial Cytoskeleton; | ||
sequence | sequence profile |
Prediction of Local Sequence Properties
Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
Identity | Alignment graph | Length | Definition | E-value | |
Target | 265 | chromosome partitioning protein A [Candidatus Liberibac | |||
254780831 | 341 | hypothetical protein CLIBASIA_03620 [Candidatus Li | 1e-06 |
>gi|254780831|ref|YP_003065244.1| hypothetical protein CLIBASIA_03620 [Candidatus Liberibacter asiaticus str. psy62] Length = 341 | Back alignment |
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Score = 44.7 bits (104), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 65/118 (55%), Gaps = 21/118 (17%) Query: 7 RIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNASTGL-----GIELYDRK 61 + + +A+ KGGVGK+TT +N++ AL G+NV ++D D G + L +E+ D+K Sbjct: 96 KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKVEISDKK 155 Query: 62 Y----SSYDLLIE------EKNINQI----LIQTAIPNL--SIIPSTMDLLGIEMILG 103 + +Y + I ++N+ I ++Q+AI ++ +++ +D L I+M G Sbjct: 156 FLKPKENYGIKIMSMASLVDENVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPG 213 |
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
Identity | Alignment graph | Length | Definition | Round | E-value |
Target | 265 | chromosome partitioning protein A [Candidatus Liberibac | |||
315122029 | 265 | chromosome partitioning protein A [Candidatus Liberibac | 1 | 1e-135 | |
190893976 | 264 | chromosome partitioning protein A [Rhizobium etli CIAT | 1 | 1e-114 | |
327191203 | 264 | chromosome partitioning protein A [Rhizobium etli CNPAF | 1 | 1e-114 | |
209551499 | 264 | cobyrinic acid ac-diamide synthase [Rhizobium leguminos | 1 | 1e-113 | |
218682744 | 264 | chromosome partitioning protein A [Rhizobium etli CIAT | 1 | 1e-113 | |
227823853 | 264 | cobyrinic acid a,c-diamide synthase [Sinorhizobium fred | 1 | 1e-113 | |
241206937 | 264 | Cobyrinic acid ac-diamide synthase [Rhizobium leguminos | 1 | 1e-113 | |
116254460 | 264 | chromosome partitioning protein [Rhizobium leguminosaru | 1 | 1e-113 | |
222087926 | 271 | chromosome partitioning protein A [Agrobacterium radiob | 1 | 1e-113 | |
86359698 | 264 | chromosome partitioning protein A [Rhizobium etli CFN 4 | 1 | 1e-112 |
>gi|315122029|ref|YP_004062518.1| chromosome partitioning protein A [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 265 | Back alignment and organism information |
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Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust. Identities = 238/263 (90%), Positives = 249/263 (94%) Query: 1 MEEKKSRIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNASTGLGIELYDR 60 MEEK +RIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNASTGLGIEL DR Sbjct: 1 MEEKNTRIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNASTGLGIELQDR 60 Query: 61 KYSSYDLLIEEKNINQILIQTAIPNLSIIPSTMDLLGIEMILGGEKDRLFRLDKALSVQL 120 +YSSY++LI EK ++Q+LI T+IPNLSIIPSTMDLLGIEM LGGEKDRLFRLDKAL+V+L Sbjct: 61 EYSSYEVLIGEKGVDQVLINTSIPNLSIIPSTMDLLGIEMRLGGEKDRLFRLDKALNVKL 120 Query: 121 TSDFSYIFLDCPPSFNLLTMNAMAAADSILVPLQCEFFALEGLSQLLETVEEVRRTVNSA 180 FSYIFLDCPPSFNLLTMNAM AADSILVPLQCEFFALEGLSQLLETVEEVRRTVN Sbjct: 121 NKKFSYIFLDCPPSFNLLTMNAMVAADSILVPLQCEFFALEGLSQLLETVEEVRRTVNLE 180 Query: 181 LDIQGIILTMFDSRNSLSQQVVSDVRKNLGGKVYNTVIPRNVRISEAPSYGKPAIIYDLK 240 LDIQGIILTMFDSRNSLSQQVVSDVRKNLG KVYNTVIPRNVRISEAPSYGKPAIIYDLK Sbjct: 181 LDIQGIILTMFDSRNSLSQQVVSDVRKNLGEKVYNTVIPRNVRISEAPSYGKPAIIYDLK 240 Query: 241 CAGSQAYLKLASELIQQERHRKE 263 CAGSQAYLKLASE+IQQER RKE Sbjct: 241 CAGSQAYLKLASEIIQQERQRKE 263 |
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|190893976|ref|YP_001980518.1| chromosome partitioning protein A [Rhizobium etli CIAT 652] Length = 264 | Back alignment and organism information |
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>gi|327191203|gb|EGE58246.1| chromosome partitioning protein A [Rhizobium etli CNPAF512] Length = 264 | Back alignment and organism information |
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>gi|209551499|ref|YP_002283416.1| cobyrinic acid ac-diamide synthase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 264 | Back alignment and organism information |
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>gi|218682744|ref|ZP_03530345.1| chromosome partitioning protein A [Rhizobium etli CIAT 894] Length = 264 | Back alignment and organism information |
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>gi|227823853|ref|YP_002827826.1| cobyrinic acid a,c-diamide synthase [Sinorhizobium fredii NGR234] Length = 264 | Back alignment and organism information |
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>gi|241206937|ref|YP_002978033.1| Cobyrinic acid ac-diamide synthase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 264 | Back alignment and organism information |
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>gi|116254460|ref|YP_770298.1| chromosome partitioning protein [Rhizobium leguminosarum bv. viciae 3841] Length = 264 | Back alignment and organism information |
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>gi|222087926|ref|YP_002546464.1| chromosome partitioning protein A [Agrobacterium radiobacter K84] Length = 271 | Back alignment and organism information |
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>gi|86359698|ref|YP_471590.1| chromosome partitioning protein A [Rhizobium etli CFN 42] Length = 264 | Back alignment and organism information |
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Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
Identity | Alignment graph | Length | Definition | E-value |
Target | 265 | chromosome partitioning protein A [Candidatus Liberibac | ||
pfam01656 | 212 | pfam01656, CbiA, CobQ/CobB/MinD/ParA nucleotide binding | 1e-34 | |
TIGR03453 | 387 | TIGR03453, partition_RepA, plasmid partitioning protein | 8e-26 | |
COG0455 | 262 | COG0455, COG0455, ATPases involved in chromosome partit | 5e-22 | |
PRK13869 | 405 | PRK13869, PRK13869, plasmid-partitioning protein RepA; | 3e-17 | |
cd02036 | 179 | cd02036, MinD, Bacterial cell division requires the for | 2e-15 | |
PRK13705 | 388 | PRK13705, PRK13705, plasmid-partitioning protein SopA; | 1e-14 | |
pfam09140 | 261 | pfam09140, MipZ, ATPase MipZ | 1e-12 | |
PHA02519 | 387 | PHA02519, PHA02519, plasmid partition protein SopA; Rev | 9e-12 | |
cd03110 | 179 | cd03110, Fer4_NifH_child, This protein family's functio | 2e-05 | |
cd00550 | 254 | cd00550, ArsA_ATPase, Oxyanion-translocating ATPase (Ar | 2e-04 | |
TIGR01969 | 251 | TIGR01969, minD_arch, cell division ATPase MinD, archae | 3e-24 | |
TIGR01968 | 261 | TIGR01968, minD_bact, septum site-determining protein M | 4e-15 | |
COG2894 | 272 | COG2894, MinD, Septum formation inhibitor-activating AT | 2e-14 | |
PRK10818 | 270 | PRK10818, PRK10818, cell division inhibitor MinD; Provi | 2e-09 | |
KOG3022 | 300 | KOG3022, KOG3022, KOG3022, Predicted ATPase, nucleotide | 5e-07 | |
COG1192 | 259 | COG1192, Soj, ATPases involved in chromosome partitioni | 4e-58 | |
PHA02518 | 211 | PHA02518, PHA02518, ParA-like protein; Provisional | 5e-15 | |
CHL00175 | 281 | CHL00175, minD, septum-site determining protein; Valida | 2e-10 | |
COG0489 | 265 | COG0489, Mrp, ATPases involved in chromosome partitioni | 1e-09 | |
COG4963 | 366 | COG4963, CpaE, Flp pilus assembly protein, ATPase CpaE | 1e-06 | |
TIGR01005 | 754 | TIGR01005, eps_transp_fam, exopolysaccharide transport | 6e-05 | |
PRK10037 | 250 | PRK10037, PRK10037, cell division protein; Provisional | 0.004 | |
cd02042 | 104 | cd02042, ParA, ParA and ParB of Caulobacter crescentus | 2e-13 | |
TIGR03371 | 246 | TIGR03371, cellulose_yhjQ, cellulose synthase operon pr | 2e-07 | |
cd02037 | 169 | cd02037, MRP-like, MRP (Multiple Resistance and pH adap | 5e-07 | |
cd02038 | 139 | cd02038, FleN-like, FleN is a member of the Fer4_NifH s | 7e-07 | |
PRK11670 | 369 | PRK11670, PRK11670, antiporter inner membrane protein; | 4e-06 | |
cd01983 | 99 | cd01983, Fer4_NifH, The Fer4_NifH superfamily contains | 6e-06 | |
cd03111 | 106 | cd03111, CpaE_like, This protein family consists of pro | 1e-05 | |
cd02117 | 212 | cd02117, NifH_like, This family contains the NifH (iron | 2e-05 | |
COG1348 | 278 | COG1348, NifH, Nitrogenase subunit NifH (ATPase) [Inorg | 2e-05 | |
PRK13185 | 270 | PRK13185, chlL, protochlorophyllide reductase iron-sulf | 2e-05 | |
pfam00142 | 269 | pfam00142, Fer4_NifH, 4Fe-4S iron sulfur cluster bindin | 3e-05 | |
cd02033 | 329 | cd02033, BchX, Chlorophyllide reductase converts chloro | 6e-05 | |
TIGR01281 | 268 | TIGR01281, DPOR_bchL, light-independent protochlorophyl | 8e-05 | |
cd02032 | 267 | cd02032, Bchl_like, This family of proteins contains bc | 9e-05 | |
cd02040 | 270 | cd02040, NifH, NifH gene encodes component II (iron pro | 1e-04 | |
PRK13232 | 273 | PRK13232, nifH, nitrogenase reductase; Reviewed | 1e-04 | |
CHL00072 | 290 | CHL00072, chlL, photochlorophyllide reductase subunit L | 2e-04 | |
cd02034 | 116 | cd02034, CooC, The accessory protein CooC, which contai | 2e-04 | |
PRK13230 | 279 | PRK13230, PRK13230, nitrogenase reductase-like protein; | 3e-04 | |
TIGR01287 | 275 | TIGR01287, nifH, nitrogenase iron protein | 8e-04 | |
KOG2825 | 323 | KOG2825, KOG2825, KOG2825, Putative arsenite-translocat | 9e-04 | |
pfam02374 | 304 | pfam02374, ArsA_ATPase, Anion-transporting ATPase | 0.001 | |
COG3640 | 255 | COG3640, CooC, CO dehydrogenase maturation factor [Cell | 0.001 | |
COG1149 | 284 | COG1149, COG1149, MinD superfamily P-loop ATPase contai | 0.001 | |
pfam06564 | 244 | pfam06564, YhjQ, YhjQ protein | 0.003 | |
PRK13236 | 296 | PRK13236, PRK13236, nitrogenase reductase; Reviewed | 0.003 | |
PRK13234 | 295 | PRK13234, nifH, nitrogenase reductase; Reviewed | 0.004 | |
cd02042 | 104 | cd02042, ParA, ParA and ParB of Caulobacter crescentus | 2e-12 | |
cd02035 | 217 | cd02035, ArsA, ArsA ATPase functionas as an efflux pump | 2e-07 | |
COG0003 | 322 | COG0003, ArsA, Predicted ATPase involved in chromosome | 2e-07 | |
TIGR01007 | 204 | TIGR01007, eps_fam, capsular exopolysaccharide family | 2e-05 | |
TIGR02016 | 296 | TIGR02016, BchX, chlorophyllide reductase iron protein | 4e-05 | |
TIGR03018 | 207 | TIGR03018, pepcterm_TyrKin, exopolysaccharide/PEPCTERM | 2e-04 | |
PRK11519 | 719 | PRK11519, PRK11519, tyrosine kinase; Provisional | 0.002 |
>gnl|CDD|145019 pfam01656, CbiA, CobQ/CobB/MinD/ParA nucleotide binding domain | Back alignment and domain information |
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>gnl|CDD|163271 TIGR03453, partition_RepA, plasmid partitioning protein RepA | Back alignment and domain information |
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>gnl|CDD|30803 COG0455, COG0455, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
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>gnl|CDD|139929 PRK13869, PRK13869, plasmid-partitioning protein RepA; Provisional | Back alignment and domain information |
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>gnl|CDD|73299 cd02036, MinD, Bacterial cell division requires the formation of a septum at mid-cell | Back alignment and domain information |
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>gnl|CDD|184261 PRK13705, PRK13705, plasmid-partitioning protein SopA; Provisional | Back alignment and domain information |
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>gnl|CDD|117696 pfam09140, MipZ, ATPase MipZ | Back alignment and domain information |
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>gnl|CDD|107201 PHA02519, PHA02519, plasmid partition protein SopA; Reviewed | Back alignment and domain information |
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>gnl|CDD|73339 cd03110, Fer4_NifH_child, This protein family's function is unkown | Back alignment and domain information |
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>gnl|CDD|73214 cd00550, ArsA_ATPase, Oxyanion-translocating ATPase (ArsA) | Back alignment and domain information |
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>gnl|CDD|131024 TIGR01969, minD_arch, cell division ATPase MinD, archaeal | Back alignment and domain information |
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>gnl|CDD|131023 TIGR01968, minD_bact, septum site-determining protein MinD | Back alignment and domain information |
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>gnl|CDD|32719 COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] | Back alignment and domain information |
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>gnl|CDD|182756 PRK10818, PRK10818, cell division inhibitor MinD; Provisional | Back alignment and domain information |
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>gnl|CDD|38232 KOG3022, KOG3022, KOG3022, Predicted ATPase, nucleotide-binding [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
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>gnl|CDD|31385 COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
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>gnl|CDD|134018 PHA02518, PHA02518, ParA-like protein; Provisional | Back alignment and domain information |
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>gnl|CDD|164554 CHL00175, minD, septum-site determining protein; Validated | Back alignment and domain information |
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>gnl|CDD|30835 COG0489, Mrp, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
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>gnl|CDD|34570 COG4963, CpaE, Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] | Back alignment and domain information |
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>gnl|CDD|130078 TIGR01005, eps_transp_fam, exopolysaccharide transport protein family | Back alignment and domain information |
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>gnl|CDD|182204 PRK10037, PRK10037, cell division protein; Provisional | Back alignment and domain information |
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>gnl|CDD|73302 cd02042, ParA, ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation | Back alignment and domain information |
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>gnl|CDD|163238 TIGR03371, cellulose_yhjQ, cellulose synthase operon protein YhjQ | Back alignment and domain information |
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>gnl|CDD|73300 cd02037, MRP-like, MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily | Back alignment and domain information |
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>gnl|CDD|73301 cd02038, FleN-like, FleN is a member of the Fer4_NifH superfamily | Back alignment and domain information |
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>gnl|CDD|183270 PRK11670, PRK11670, antiporter inner membrane protein; Provisional | Back alignment and domain information |
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>gnl|CDD|73290 cd01983, Fer4_NifH, The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain | Back alignment and domain information |
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>gnl|CDD|73340 cd03111, CpaE_like, This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster | Back alignment and domain information |
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>gnl|CDD|48371 cd02117, NifH_like, This family contains the NifH (iron protein) of nitrogenase, L subunit (BchL/ChlL) of the protochlorophyllide reductase and the BchX subunit of the Chlorophyllide reductase | Back alignment and domain information |
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>gnl|CDD|31539 COG1348, NifH, Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism] | Back alignment and domain information |
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>gnl|CDD|183881 PRK13185, chlL, protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional | Back alignment and domain information |
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>gnl|CDD|143913 pfam00142, Fer4_NifH, 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family | Back alignment and domain information |
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>gnl|CDD|48363 cd02033, BchX, Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring | Back alignment and domain information |
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>gnl|CDD|130348 TIGR01281, DPOR_bchL, light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein | Back alignment and domain information |
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>gnl|CDD|48362 cd02032, Bchl_like, This family of proteins contains bchL and chlL | Back alignment and domain information |
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>gnl|CDD|48369 cd02040, NifH, NifH gene encodes component II (iron protein) of nitrogenase | Back alignment and domain information |
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>gnl|CDD|106194 PRK13232, nifH, nitrogenase reductase; Reviewed | Back alignment and domain information |
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>gnl|CDD|177011 CHL00072, chlL, photochlorophyllide reductase subunit L | Back alignment and domain information |
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>gnl|CDD|73297 cd02034, CooC, The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH) | Back alignment and domain information |
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>gnl|CDD|183903 PRK13230, PRK13230, nitrogenase reductase-like protein; Reviewed | Back alignment and domain information |
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>gnl|CDD|162286 TIGR01287, nifH, nitrogenase iron protein | Back alignment and domain information |
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>gnl|CDD|38036 KOG2825, KOG2825, KOG2825, Putative arsenite-translocating ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
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>gnl|CDD|111283 pfam02374, ArsA_ATPase, Anion-transporting ATPase | Back alignment and domain information |
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>gnl|CDD|33438 COG3640, CooC, CO dehydrogenase maturation factor [Cell division and chromosome partitioning] | Back alignment and domain information |
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>gnl|CDD|31343 COG1149, COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] | Back alignment and domain information |
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>gnl|CDD|148269 pfam06564, YhjQ, YhjQ protein | Back alignment and domain information |
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>gnl|CDD|183908 PRK13236, PRK13236, nitrogenase reductase; Reviewed | Back alignment and domain information |
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>gnl|CDD|183906 PRK13234, nifH, nitrogenase reductase; Reviewed | Back alignment and domain information |
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>gnl|CDD|73302 cd02042, ParA, ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation | Back alignment and domain information |
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>gnl|CDD|73298 cd02035, ArsA, ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell | Back alignment and domain information |
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>gnl|CDD|30352 COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
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>gnl|CDD|130080 TIGR01007, eps_fam, capsular exopolysaccharide family | Back alignment and domain information |
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>gnl|CDD|162661 TIGR02016, BchX, chlorophyllide reductase iron protein subunit X | Back alignment and domain information |
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>gnl|CDD|132063 TIGR03018, pepcterm_TyrKin, exopolysaccharide/PEPCTERM locus tyrosine autokinase | Back alignment and domain information |
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>gnl|CDD|183173 PRK11519, PRK11519, tyrosine kinase; Provisional | Back alignment and domain information |
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Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
Identity | Alignment graph | Length | Definition | Probability |
Target | 265 | chromosome partitioning protein A [Candidatus Liberibac | ||
TIGR03453 | 387 | partition_RepA plasmid partitioning protein RepA. Membe | 100.0 | |
TIGR03371 | 246 | cellulose_yhjQ cellulose synthase operon protein YhjQ. | 100.0 | |
PRK13869 | 405 | plasmid-partitioning protein RepA; Provisional | 100.0 | |
TIGR01969 | 258 | minD_arch cell division ATPase MinD; InterPro: IPR01022 | 100.0 | |
PRK10818 | 270 | cell division inhibitor MinD; Provisional | 100.0 | |
CHL00175 | 279 | minD septum-site determining protein; Validated | 100.0 | |
TIGR01968 | 272 | minD_bact septum site-determining protein MinD; InterPr | 100.0 | |
PRK13705 | 388 | plasmid-partitioning protein SopA; Provisional | 100.0 | |
PHA02519 | 387 | plasmid partition protein SopA; Reviewed | 100.0 | |
pfam06564 | 244 | YhjQ YhjQ protein. This family consists of several bact | 100.0 | |
COG1192 | 259 | Soj ATPases involved in chromosome partitioning [Cell d | 100.0 | |
PHA02518 | 211 | ParA-like protein; Provisional | 100.0 | |
pfam00142 | 269 | Fer4_NifH 4Fe-4S iron sulfur cluster binding proteins, | 100.0 | |
cd02040 | 270 | NifH NifH gene encodes component II (iron protein) of n | 100.0 | |
PRK13230 | 292 | nitrogenase reductase-like protein; Reviewed | 100.0 | |
PRK11670 | 369 | putative ATPase; Provisional | 100.0 | |
COG2894 | 272 | MinD Septum formation inhibitor-activating ATPase [Cell | 100.0 | |
cd02036 | 179 | MinD Bacterial cell division requires the formation of | 100.0 | |
PRK13232 | 273 | nifH nitrogenase reductase; Reviewed | 100.0 | |
PRK13235 | 274 | nifH nitrogenase reductase; Reviewed | 100.0 | |
PRK10037 | 250 | cell division protein; Provisional | 100.0 | |
PRK13233 | 275 | nifH nitrogenase reductase; Reviewed | 100.0 | |
COG0455 | 262 | flhG Antiactivator of flagellar biosynthesis FleN, an A | 100.0 | |
cd02032 | 267 | Bchl_like This family of proteins contains bchL and chl | 100.0 | |
PRK13231 | 264 | nitrogenase reductase-like protein; Reviewed | 100.0 | |
PRK13185 | 269 | chlL protochlorophyllide reductase iron-sulfur ATP-bind | 100.0 | |
pfam09140 | 261 | MipZ ATPase MipZ. MipZ is an ATPase that forms a comple | 100.0 | |
KOG3022 | 300 | consensus | 100.0 | |
CHL00072 | 271 | chlL photochlorophyllide reductase subunit L | 100.0 | |
PRK13236 | 295 | nitrogenase reductase; Reviewed | 100.0 | |
pfam07015 | 231 | VirC1 VirC1 protein. This family consists of several ba | 100.0 | |
PRK13234 | 293 | nifH nitrogenase reductase; Reviewed | 100.0 | |
TIGR01287 | 278 | nifH nitrogenase iron protein; InterPro: IPR005977 The | 100.0 | |
TIGR01281 | 275 | DPOR_bchL light-independent protochlorophyllide reducta | 100.0 | |
PRK13849 | 231 | putative crown gall tumor protein VirC1; Provisional | 100.0 | |
COG4963 | 366 | CpaE Flp pilus assembly protein, ATPase CpaE [Intracell | 99.97 | |
COG3640 | 255 | CooC CO dehydrogenase maturation factor [Cell division | 99.96 | |
COG1348 | 278 | NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion t | 99.96 | |
COG1149 | 284 | MinD superfamily P-loop ATPase containing an inserted f | 99.95 | |
cd02033 | 329 | BchX Chlorophyllide reductase converts chlorophylls int | 99.94 | |
TIGR00750 | 333 | lao LAO/AO transport system ATPase; InterPro: IPR005129 | 98.54 | |
pfam01656 | 212 | CbiA CobQ/CobB/MinD/ParA nucleotide binding domain. Thi | 100.0 | |
cd02117 | 212 | NifH_like This family contains the NifH (iron protein) | 100.0 | |
cd03110 | 179 | Fer4_NifH_child This protein family's function is unkow | 99.97 | |
COG0489 | 265 | Mrp ATPases involved in chromosome partitioning [Cell d | 99.96 | |
cd02037 | 169 | MRP-like MRP (Multiple Resistance and pH adaptation) is | 99.96 | |
cd02038 | 139 | FleN-like FleN is a member of the Fer4_NifH superfamily | 99.95 | |
cd00550 | 254 | ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This | 99.94 | |
TIGR02016 | 355 | BchX chlorophyllide reductase iron protein subunit X; I | 99.76 | |
TIGR01005 | 778 | eps_transp_fam exopolysaccharide transport protein fami | 99.53 | |
PRK00090 | 223 | bioD dithiobiotin synthetase; Reviewed | 98.95 | |
pfam00448 | 196 | SRP54 SRP54-type protein, GTPase domain. This family in | 98.84 | |
TIGR00959 | 439 | ffh signal recognition particle protein; InterPro: IPR0 | 98.84 | |
PRK12374 | 231 | putative dithiobiotin synthetase; Provisional | 98.78 | |
cd03115 | 173 | SRP The signal recognition particle (SRP) mediates the | 98.76 | |
PRK13896 | 432 | cobyrinic acid a,c-diamide synthase; Provisional | 98.75 | |
PRK10416 | 499 | cell division protein FtsY; Provisional | 98.73 | |
PRK00784 | 492 | cobyric acid synthase; Provisional | 98.72 | |
pfam03308 | 267 | ArgK ArgK protein. The ArgK protein acts as an ATPase e | 98.71 | |
PRK01077 | 451 | cobyrinic acid a,c-diamide synthase; Validated | 98.71 | |
PRK05703 | 412 | flhF flagellar biosynthesis regulator FlhF; Validated | 98.7 | |
COG0541 | 451 | Ffh Signal recognition particle GTPase [Intracellular t | 98.7 | |
TIGR00313 | 502 | cobQ cobyric acid synthase CobQ; InterPro: IPR004459 Co | 98.69 | |
PRK11889 | 436 | flhF flagellar biosynthesis regulator FlhF; Provisional | 98.65 | |
PRK09435 | 325 | arginine/ornithine transport system ATPase; Provisional | 98.61 | |
PRK12724 | 432 | flagellar biosynthesis regulator FlhF; Provisional | 98.61 | |
PRK00771 | 433 | signal recognition particle protein Srp54; Provisional | 98.57 | |
PRK10867 | 453 | signal recognition particle protein; Provisional | 98.56 | |
PRK06995 | 404 | flhF flagellar biosynthesis regulator FlhF; Validated | 98.53 | |
COG1797 | 451 | CobB Cobyrinic acid a,c-diamide synthase [Coenzyme meta | 98.47 | |
COG1419 | 407 | FlhF Flagellar GTP-binding protein [Cell motility and s | 98.41 | |
PRK12727 | 557 | flagellar biosynthesis regulator FlhF; Provisional | 98.32 | |
COG0552 | 340 | FtsY Signal recognition particle GTPase [Intracellular | 98.28 | |
COG0132 | 223 | BioD Dethiobiotin synthetase [Coenzyme metabolism] | 98.24 | |
TIGR00064 | 284 | ftsY signal recognition particle-docking protein FtsY; | 98.15 | |
TIGR00379 | 464 | cobB cobyrinic acid a,c-diamide synthase; InterPro: IPR | 97.93 | |
pfam07755 | 302 | DUF1611 Protein of unknown function (DUF1611). This reg | 97.36 | |
COG1492 | 486 | CobQ Cobyric acid synthase [Coenzyme metabolism] | 97.08 | |
COG3367 | 339 | Uncharacterized conserved protein [Function unknown] | 96.23 | |
PRK06278 | 482 | cobyrinic acid a,c-diamide synthase; Validated | 92.52 | |
TIGR01007 | 207 | eps_fam capsular exopolysaccharide family; InterPro: IP | 99.96 | |
PRK11519 | 720 | tyrosine kinase; Provisional | 99.96 | |
PRK09841 | 726 | cryptic autophosphorylating protein tyrosine kinase Etk | 99.96 | |
cd02042 | 104 | ParA ParA and ParB of Caulobacter crescentus belong to | 99.95 | |
TIGR03029 | 274 | EpsG chain length determinant protein tyrosine kinase E | 99.94 | |
cd02035 | 217 | ArsA ArsA ATPase functionas as an efflux pump located o | 99.94 | |
TIGR03018 | 207 | pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosi | 99.92 | |
cd03111 | 106 | CpaE_like This protein family consists of proteins simi | 99.9 | |
pfam02374 | 304 | ArsA_ATPase Anion-transporting ATPase. This Pfam family | 99.83 | |
COG1703 | 323 | ArgK Putative periplasmic protein kinase ArgK and relat | 98.76 | |
PRK13768 | 253 | GTPase; Provisional | 98.48 | |
KOG0781 | 587 | consensus | 98.32 | |
PRK05632 | 702 | phosphate acetyltransferase; Reviewed | 98.11 | |
TIGR01425 | 453 | SRP54_euk signal recognition particle protein SRP54; In | 97.98 | |
TIGR01166 | 190 | cbiO cobalt ABC transporter, ATP-binding protein; Inter | 95.94 | |
cd02034 | 116 | CooC The accessory protein CooC, which contains a nucle | 99.72 | |
cd01983 | 99 | Fer4_NifH The Fer4_NifH superfamily contains a variety | 99.68 | |
COG0003 | 322 | ArsA Predicted ATPase involved in chromosome partitioni | 99.66 | |
pfam03029 | 234 | ATP_bind_1 Conserved hypothetical ATP binding protein. | 98.61 | |
cd03114 | 148 | ArgK-like The function of this protein family is unkown | 98.14 | |
KOG1532 | 366 | consensus | 98.14 | |
KOG1533 | 290 | consensus | 97.81 | |
KOG1534 | 273 | consensus | 97.13 | |
PRK08533 | 230 | flagellar accessory protein FlaH; Reviewed | 96.78 | |
TIGR01618 | 229 | phage_P_loop phage nucleotide-binding protein; InterPro | 96.2 | |
COG2874 | 235 | FlaH Predicted ATPases involved in biogenesis of archae | 95.95 | |
TIGR00345 | 330 | arsA arsenite-activated ATPase (arsA); InterPro: IPR003 | 99.72 | |
KOG2825 | 323 | consensus | 99.32 | |
PRK12726 | 407 | flagellar biosynthesis regulator FlhF; Provisional | 98.75 | |
PRK06731 | 270 | flhF flagellar biosynthesis regulator FlhF; Validated | 98.66 | |
PRK13886 | 241 | conjugal transfer protein TraL; Provisional | 98.46 | |
PRK12723 | 388 | flagellar biosynthesis regulator FlhF; Provisional | 98.46 | |
KOG0780 | 483 | consensus | 98.3 | |
TIGR03499 | 282 | FlhF flagellar biosynthetic protein FlhF. | 98.16 | |
COG1341 | 398 | Predicted GTPase or GTP-binding protein [General functi | 97.88 | |
TIGR00455 | 187 | apsK adenylylsulfate kinase; InterPro: IPR002891 Enzyme | 97.74 | |
PRK07667 | 190 | uridine kinase; Provisional | 97.37 | |
COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [Inorga | 97.25 | |
cd03116 | 159 | MobB Molybdenum is an essential trace element in the fo | 97.14 | |
TIGR02237 | 223 | recomb_radB DNA repair and recombination protein RadB; | 97.08 | |
PRK05541 | 176 | adenylylsulfate kinase; Provisional | 97.07 | |
pfam03205 | 122 | MobB Molybdopterin guanine dinucleotide synthesis prote | 97.04 | |
TIGR00347 | 187 | bioD dethiobiotin synthase; InterPro: IPR004472 The enz | 97.02 | |
PRK03846 | 198 | adenylylsulfate kinase; Provisional | 96.84 | |
PRK00652 | 334 | lpxK tetraacyldisaccharide 4'-kinase; Reviewed | 96.83 | |
pfam01583 | 157 | APS_kinase Adenylylsulphate kinase. Enzyme that catalys | 96.82 | |
PRK06696 | 227 | uridine kinase; Validated | 96.8 | |
) of Arabidopsis thaliana (Mouse-ear cress), mammalian Gephryin (e.g. Q9NQX3 from SWISSPROT) and Drosophila melanogaster (Fruit fly) Cinnamon (P39205 from SWISSPROT) . The MobB domain is similar to that of the urease accessory protein UreG and the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocentres of their respective target enzymes. It is involved in the final step of molybdenum-cofactor biosynthesis. While its precise function has not been identified it is thought to be involved in the transfer of a guanine dinucleotide moiety to molybdopterin, as it shows GTP-binding and weak GTPase activity . The MobB protein (P32125 from SWISSPROT) from Escherichia coli, which is comprised of this domain, is a homodimer . Each molecule is composed of two distinct regions - an outer region comprised of 6 beta-strands and three alpha helices, and an inner region comprised of a two-strand beta hairpin followed by an alpha helix. These regions require interaction with the second monomer to allow proper folding to occur. The two monomers are intertwined and form an extensive 16-stranded beta-sheet. While the active site could not be positively identified, the presence of highly conserved residues suggests the substrate binding site occurs in the central solvent channel.; GO: 0005525 GTP binding, 0006777 Mo-molybdopterin cofactor biosynthetic process." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=TIGR00176">TIGR00176 | 165 | mobB molybdopterin-guanine dinucleotide biosynthesis pr | 96.78 | |
PRK00313 | 332 | lpxK tetraacyldisaccharide 4'-kinase; Provisional | 96.74 | |
PRK10751 | 170 | molybdopterin-guanine dinucleotide biosynthesis protein | 96.73 | |
PRK00889 | 175 | adenylylsulfate kinase; Provisional | 96.69 | |
pfam02606 | 318 | LpxK Tetraacyldisaccharide-1-P 4'-kinase. This family c | 96.65 | |
cd01125 | 239 | repA Hexameric Replicative Helicase RepA. RepA is encod | 96.63 | |
TIGR02640 | 265 | gas_vesic_GvpN gas vesicle protein GvpN; InterPro: IPR0 | 96.54 | |
PRK09361 | 224 | radB DNA repair and recombination protein RadB; Provisi | 96.5 | |
PRK01906 | 339 | tetraacyldisaccharide 4'-kinase; Provisional | 96.48 | |
PRK05480 | 209 | uridine kinase; Provisional | 96.47 | |
PRK05537 | 568 | bifunctional sulfate adenylyltransferase subunit 1/aden | 96.35 | |
cd02027 | 149 | APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyze | 96.35 | |
cd00984 | 242 | DnaB_C DnaB helicase C terminal domain. The hexameric h | 96.33 | |
cd02028 | 179 | UMPK_like Uridine monophosphate kinase_like (UMPK_like) | 96.31 | |
cd01394 | 218 | radB RadB. The archaeal protein radB shares similarity | 96.28 | |
PRK00089 | 296 | era GTP-binding protein Era; Reviewed | 96.21 | |
pfam03796 | 186 | DnaB_C DnaB-like helicase C terminal domain. The hexame | 96.18 | |
KOG2749 | 415 | consensus | 96.09 | |
PRK12377 | 248 | putative replication protein; Provisional | 96.08 | |
COG1763 | 161 | MobB Molybdopterin-guanine dinucleotide biosynthesis pr | 96.05 | |
pfam02572 | 172 | CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/C | 96.02 | |
cd01122 | 271 | GP4d_helicase GP4d_helicase is a homohexameric 5'-3' he | 95.9 | |
PRK06526 | 254 | transposase; Provisional | 95.89 | |
COG1663 | 336 | LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope | 95.89 | |
PRK06749 | 428 | replicative DNA helicase; Provisional | 95.85 | |
cd02023 | 198 | UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1.48), | 95.82 | |
COG1484 | 254 | DnaC DNA replication protein [DNA replication, recombin | 95.82 | |
PRK09302 | 501 | circadian clock protein KaiC; Reviewed | 95.81 | |
cd01124 | 187 | KaiC KaiC is a circadian clock protein primarily found | 95.77 | |
cd00561 | 159 | CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/C | 95.67 | |
TIGR03600 | 421 | phage_DnaB phage replicative helicase, DnaB family, HK0 | 95.67 | |
TIGR01054 | 1843 | rgy reverse gyrase; InterPro: IPR005736 DNA topoisomera | 95.59 | |
PRK08181 | 269 | transposase; Validated | 95.58 | |
PRK06547 | 184 | hypothetical protein; Provisional | 95.57 | |
pfam00485 | 196 | PRK Phosphoribulokinase / Uridine kinase family. In Ara | 95.57 | |
PRK09183 | 258 | transposase/IS protein; Provisional | 95.54 | |
PRK05595 | 444 | replicative DNA helicase; Provisional | 95.53 | |
PRK07952 | 242 | DNA replication protein DnaC; Validated | 95.52 | |
COG1159 | 298 | Era GTPase [General function prediction only] | 95.51 | |
PRK05748 | 448 | replicative DNA helicase; Provisional | 95.48 | |
PRK08506 | 473 | replicative DNA helicase; Provisional | 95.46 | |
cd01120 | 165 | RecA-like_NTPases RecA-like NTPases. This family includ | 95.46 | |
PRK07004 | 460 | replicative DNA helicase; Provisional | 95.43 | |
pfam00154 | 322 | RecA recA bacterial DNA recombination protein. RecA is | 95.36 | |
PRK13506 | 577 | formate--tetrahydrofolate ligase; Provisional | 95.24 | |
pfam01695 | 178 | IstB IstB-like ATP binding protein. This protein contai | 95.24 | |
PRK04328 | 250 | hypothetical protein; Provisional | 95.21 | |
COG3598 | 402 | RepA RecA-family ATPase [DNA replication, recombination | 95.19 | |
PRK07263 | 453 | consensus | 95.18 | |
TIGR03172 | 232 | probable selenium-dependent hydroxylase accessory prote | 95.05 | |
PRK07414 | 178 | cob(I)yrinic acid a,c-diamide adenosyltransferase; Vali | 95.03 | |
PRK08082 | 453 | consensus | 95.02 | |
PRK05636 | 507 | replicative DNA helicase; Provisional | 94.98 | |
COG0467 | 260 | RAD55 RecA-superfamily ATPases implicated in signal tra | 94.97 | |
COG0523 | 323 | Putative GTPases (G3E family) [General function predict | 94.95 | |
COG2403 | 449 | Predicted GTPase [General function prediction only] | 94.92 | |
cd00983 | 325 | recA RecA is a bacterial enzyme which has roles in homo | 94.92 | |
TIGR01085 | 494 | murE UDP-N-acetylmuramyl-tripeptide synthetases; InterP | 94.91 | |
PRK13505 | 556 | formate--tetrahydrofolate ligase; Provisional | 94.89 | |
PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syntheta | 94.87 | |
cd00477 | 524 | FTHFS Formyltetrahydrofolate synthetase (FTHFS) catalyz | 94.83 | |
PRK08939 | 306 | primosomal protein DnaI; Reviewed | 94.78 | |
pfam01268 | 555 | FTHFS Formate--tetrahydrofolate ligase. | 94.74 | |
PRK08694 | 468 | consensus | 94.7 | |
PRK08840 | 464 | replicative DNA helicase; Provisional | 94.69 | |
PRK09270 | 230 | frcK putative fructose transport system kinase; Reviewe | 94.67 | |
KOG0635 | 207 | consensus | 94.62 | |
PRK13507 | 587 | formate--tetrahydrofolate ligase; Provisional | 94.62 | |
PRK09401 | 1176 | reverse gyrase; Reviewed | 94.61 | |
PRK06067 | 241 | flagellar accessory protein FlaH; Validated | 94.48 | |
COG0468 | 279 | RecA RecA/RadA recombinase [DNA replication, recombinat | 94.47 | |
PRK09165 | 484 | replicative DNA helicase; Provisional | 94.44 | |
smart00382 | 148 | AAA ATPases associated with a variety of cellular activ | 94.42 | |
TIGR02928 | 383 | TIGR02928 orc1/cdc6 family replication initiation prote | 94.41 | |
PRK08116 | 262 | hypothetical protein; Validated | 94.34 | |
PRK08760 | 476 | replicative DNA helicase; Provisional | 94.14 | |
COG4988 | 559 | CydD ABC-type transport system involved in cytochrome b | 94.14 | |
PRK11174 | 588 | cysteine/glutathione ABC transporter membrane/ATP-bindi | 94.11 | |
cd01393 | 226 | recA_like RecA is a bacterial enzyme which has roles in | 94.07 | |
PRK04690 | 468 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syntheta | 94.04 | |
PRK08006 | 471 | replicative DNA helicase; Provisional | 93.97 | |
PRK04220 | 306 | 2-phosphoglycerate kinase; Provisional | 93.9 | |
PRK08233 | 182 | hypothetical protein; Provisional | 93.89 | |
TIGR03574 | 249 | selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Members | 93.85 | |
PTZ00301 | 210 | uridine kinase; Provisional | 93.77 | |
PRK09354 | 350 | recA recombinase A; Provisional | 93.77 | |
pfam08433 | 266 | KTI12 Chromatin associated protein KTI12. This is a fam | 93.75 | |
pfam01935 | 218 | DUF87 Domain of unknown function DUF87. The function of | 93.6 | |
PRK01390 | 457 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syntheta | 93.56 | |
PRK05973 | 237 | replicative DNA helicase; Provisional | 93.46 | |
PRK11545 | 177 | gntK gluconate kinase 1; Provisional | 93.43 | |
PRK06321 | 472 | replicative DNA helicase; Provisional | 93.42 | |
pfam06745 | 231 | KaiC KaiC. This family represents a conserved region wi | 93.35 | |
PRK00139 | 481 | murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diamin | 93.22 | |
cd01123 | 235 | Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recomb | 93.21 | |
COG1110 | 1187 | Reverse gyrase [DNA replication, recombination, and rep | 93.2 | |
PRK07261 | 171 | topology modulation protein; Provisional | 93.18 | |
PRK06904 | 472 | replicative DNA helicase; Validated | 93.13 | |
pfam04851 | 103 | ResIII Type III restriction enzyme, res subunit. | 93.05 | |
PRK02006 | 501 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syntheta | 92.98 | |
cd01121 | 372 | Sms Sms (bacterial radA) DNA repair protein. This prote | 92.96 | |
PRK03333 | 394 | coaE dephospho-CoA kinase/unknown domain fusion protein | 92.94 | |
PRK06835 | 330 | DNA replication protein DnaC; Validated | 92.93 | |
PRK03803 | 448 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syntheta | 92.9 | |
PRK08118 | 167 | topology modulation protein; Reviewed | 92.85 | |
PRK03369 | 487 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syntheta | 92.84 | |
KOG1805 | 1100 | consensus | 92.8 | |
pfam02223 | 186 | Thymidylate_kin Thymidylate kinase. | 92.76 | |
cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide variety of | 92.72 | |
PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syntheta | 92.72 | |
COG0857 | 354 | Pta BioD-like N-terminal domain of phosphotransacetylas | 92.69 | |
cd02025 | 220 | PanK Pantothenate kinase (PanK) catalyzes the phosphory | 92.68 | |
COG4240 | 300 | Predicted kinase [General function prediction only] | 92.68 | |
COG0572 | 218 | Udk Uridine kinase [Nucleotide transport and metabolism | 92.65 | |
PRK03806 | 438 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syntheta | 92.64 | |
KOG4658 | 889 | consensus | 92.57 | |
TIGR01313 | 175 | therm_gnt_kin carbohydrate kinase, thermoresistant gluc | 92.5 | |
COG1072 | 283 | CoaA Panthothenate kinase [Coenzyme metabolism] | 92.49 | |
PRK00698 | 204 | tmk thymidylate kinase; Validated | 92.41 | |
PRK00683 | 418 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syntheta | 92.27 | |
PRK13764 | 605 | ATPase; Provisional | 92.27 | |
PRK04663 | 438 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syntheta | 92.18 | |
COG1618 | 179 | Predicted nucleotide kinase [Nucleotide transport and m | 92.11 | |
pfam05729 | 165 | NACHT NACHT domain. This NTPase domain is found in apop | 92.04 | |
cd02029 | 277 | PRK_like Phosphoribulokinase-like (PRK-like) is a famil | 91.79 | |
PRK12339 | 197 | 2-phosphoglycerate kinase; Provisional | 91.66 | |
cd01672 | 200 | TMPK Thymidine monophosphate kinase (TMPK), also known | 91.59 | |
PRK01438 | 481 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syntheta | 91.58 | |
PRK01368 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syntheta | 91.54 | |
COG4088 | 261 | Predicted nucleotide kinase [Nucleotide transport and m | 91.5 | |
PRK06217 | 185 | hypothetical protein; Validated | 91.48 | |
PRK13721 | 864 | conjugal transfer ATP-binding protein TraC; Provisional | 91.47 | |
PRK02472 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syntheta | 91.43 | |
TIGR00041 | 211 | DTMP_kinase thymidylate kinase; InterPro: IPR000062 Thy | 91.4 | |
TIGR01082 | 491 | murC UDP-N-acetylmuramate--alanine ligase; InterPro: IP | 91.29 | |
COG2759 | 554 | MIS1 Formyltetrahydrofolate synthetase [Nucleotide tran | 91.15 | |
PRK07933 | 213 | thymidylate kinase; Validated | 91.04 | |
PRK05986 | 190 | cob(I)yrinic acid a,c-diamide adenosyltransferase; Vali | 91.04 | |
COG1120 | 258 | FepC ABC-type cobalamin/Fe3+-siderophores transport sys | 91.01 | |
PRK13973 | 216 | thymidylate kinase; Provisional | 91.0 | |
PRK05876 | 275 | short chain dehydrogenase; Provisional | 90.94 | |
COG0771 | 448 | MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Ce | 90.93 | |
PRK06194 | 301 | hypothetical protein; Provisional | 90.92 | |
TIGR02475 | 349 | CobW cobalamin biosynthesis protein CobW; InterPro: IPR | 90.88 | |
PRK09825 | 176 | idnK D-gluconate kinase; Provisional | 90.84 | |
PRK02705 | 459 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syntheta | 90.82 | |
cd01897 | 168 | NOG NOG1 is a nucleolar GTP-binding protein present in | 90.8 | |
PRK00141 | 476 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syntheta | 90.74 | |
TIGR02173 | 173 | cyt_kin_arch cytidylate kinase, putative; InterPro: IPR | 90.73 | |
COG3973 | 747 | Superfamily I DNA and RNA helicases [General function p | 90.72 | |
pfam02562 | 205 | PhoH PhoH-like protein. PhoH is a cytoplasmic protein a | 90.45 | |
TIGR02770 | 239 | nickel_nikD nickel import ATP-binding protein NikD; Int | 90.38 | |
pfam05970 | 418 | DUF889 PIF1 helicase. The PIF1 helicase inhibits telome | 90.27 | |
COG0125 | 208 | Tmk Thymidylate kinase [Nucleotide transport and metabo | 90.04 | |
cd04169 | 267 | RF3 RF3 subfamily. Peptide chain release factor 3 (RF3) | 98.43 | |
cd01886 | 270 | EF-G Elongation factor G (EF-G) subfamily. Translocatio | 98.34 | |
cd04170 | 268 | EF-G_bact Elongation factor G (EF-G) subfamily. Translo | 98.27 | |
PRK00741 | 526 | prfC peptide chain release factor 3; Provisional | 98.23 | |
cd04168 | 237 | TetM_like Tet(M)-like subfamily. Tet(M), Tet(O), Tet(W) | 98.2 | |
PRK00007 | 693 | elongation factor G; Reviewed | 97.63 | |
pfam00009 | 185 | GTP_EFTU Elongation factor Tu GTP binding domain. This | 97.14 | |
PRK12740 | 670 | elongation factor G; Reviewed | 96.86 | |
PRK13351 | 687 | elongation factor G; Reviewed | 96.8 | |
COG0480 | 697 | FusA Translation elongation factors (GTPases) [Translat | 96.78 | |
PRK05506 | 613 | bifunctional sulfate adenylyltransferase subunit 1/aden | 96.62 | |
PRK12739 | 693 | elongation factor G; Reviewed | 96.3 | |
cd01890 | 179 | LepA LepA subfamily. LepA belongs to the GTPase family | 96.14 | |
cd01891 | 194 | TypA_BipA TypA (tyrosine phosphorylated protein A)/BipA | 95.9 | |
TIGR01393 | 598 | lepA GTP-binding protein LepA; InterPro: IPR006297 LepA | 95.37 | |
PRK05433 | 601 | GTP-binding protein LepA; Provisional | 95.25 | |
PRK10218 | 607 | GTP-binding protein; Provisional | 94.49 | |
KOG0462 | 650 | consensus | 94.02 | |
cd00881 | 189 | GTP_translation_factor GTP translation factor family. T | 93.9 | |
cd01889 | 192 | SelB_euk SelB subfamily. SelB is an elongation factor n | 93.56 | |
TIGR00437 | 733 | feoB ferrous iron transport protein B; InterPro: IPR003 | 92.46 | |
cd01887 | 168 | IF2_eIF5B IF2/eIF5B (initiation factors 2/ eukaryotic i | 92.05 | |
PRK12297 | 429 | obgE GTPase ObgE; Reviewed | 90.34 | |
PRK12299 | 334 | obgE GTPase ObgE; Reviewed | 90.32 | |
PRK12298 | 380 | obgE GTPase ObgE; Reviewed | 90.26 | |
cd01888 | 203 | eIF2_gamma eIF2-gamma (gamma subunit of initiation fact | 90.11 | |
pfam10609 | 81 | ParA ParA/MinD ATPase like. This family contains ATPase | 98.36 | |
PRK07560 | 730 | elongation factor EF-2; Reviewed | 96.53 | |
cd01885 | 222 | EF2 EF2 (for archaea and eukarya). Translocation requir | 91.87 | |
cd01883 | 219 | EF1_alpha Eukaryotic elongation factor 1 (EF1) alpha su | 91.46 | |
cd04166 | 208 | CysN_ATPS CysN_ATPS subfamily. CysN, together with prot | 91.39 | |
cd04167 | 213 | Snu114p Snu114p subfamily. Snu114p is one of several pr | 91.27 | |
cd03109 | 134 | DTBS Dethiobiotin synthetase (DTBS) is the penultimate | 98.25 | |
TIGR01394 | 609 | TypA_BipA GTP-binding protein TypA; InterPro: IPR006298 | 95.73 | |
pfam00071 | 162 | Ras Ras family. Includes sub-families Ras, Rab, Rac, Ra | 93.2 | |
cd01866 | 168 | Rab2 Rab2 subfamily. Rab2 is localized on cis-Golgi mem | 93.1 | |
cd04144 | 190 | Ras2 Ras2 subfamily. The Ras2 subfamily, found exclusiv | 92.17 | |
cd04111 | 211 | Rab39 Rab39 subfamily. Found in eukaryotes, Rab39 is ma | 91.95 | |
cd04122 | 166 | Rab14 Rab14 subfamily. Rab14 GTPases are localized to b | 90.95 | |
cd04141 | 172 | Rit_Rin_Ric Rit/Rin/Ric subfamily. Rit (Ras-like protei | 90.7 | |
cd01867 | 167 | Rab8_Rab10_Rab13_like Rab8/Sec4/Ypt2. Rab8/Sec4/Ypt2 ar | 90.37 | |
pfam00931 | 285 | NB-ARC NB-ARC domain. | 95.33 | |
PRK09554 | 772 | feoB ferrous iron transport protein B; Reviewed | 91.34 | |
TIGR00763 | 941 | lon ATP-dependent protease La; InterPro: IPR004815 Prot | 91.03 | |
pfam00437 | 283 | GSPII_E Type II/IV secretion system protein. This famil | 90.16 |
>TIGR03453 partition_RepA plasmid partitioning protein RepA | Back alignment and domain information |
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>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ | Back alignment and domain information |
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>PRK13869 plasmid-partitioning protein RepA; Provisional | Back alignment and domain information |
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>TIGR01969 minD_arch cell division ATPase MinD; InterPro: IPR010224 Proper placement of the bacterial cell division site requires the site-specific inactivation of other potential division sites | Back alignment and domain information |
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>PRK10818 cell division inhibitor MinD; Provisional | Back alignment and domain information |
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>CHL00175 minD septum-site determining protein; Validated | Back alignment and domain information |
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>TIGR01968 minD_bact septum site-determining protein MinD; InterPro: IPR010223 This entry describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum | Back alignment and domain information |
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>PRK13705 plasmid-partitioning protein SopA; Provisional | Back alignment and domain information |
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>PHA02519 plasmid partition protein SopA; Reviewed | Back alignment and domain information |
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>pfam06564 YhjQ YhjQ protein | Back alignment and domain information |
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>COG1192 Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
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>PHA02518 ParA-like protein; Provisional | Back alignment and domain information |
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>pfam00142 Fer4_NifH 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family | Back alignment and domain information |
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>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase | Back alignment and domain information |
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>PRK13230 nitrogenase reductase-like protein; Reviewed | Back alignment and domain information |
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>PRK11670 putative ATPase; Provisional | Back alignment and domain information |
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>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] | Back alignment and domain information |
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>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell | Back alignment and domain information |
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>PRK13232 nifH nitrogenase reductase; Reviewed | Back alignment and domain information |
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>PRK13235 nifH nitrogenase reductase; Reviewed | Back alignment and domain information |
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>PRK10037 cell division protein; Provisional | Back alignment and domain information |
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>PRK13233 nifH nitrogenase reductase; Reviewed | Back alignment and domain information |
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>COG0455 flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] | Back alignment and domain information |
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>cd02032 Bchl_like This family of proteins contains bchL and chlL | Back alignment and domain information |
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>PRK13231 nitrogenase reductase-like protein; Reviewed | Back alignment and domain information |
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>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional | Back alignment and domain information |
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>pfam09140 MipZ ATPase MipZ | Back alignment and domain information |
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>KOG3022 consensus | Back alignment and domain information |
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>CHL00072 chlL photochlorophyllide reductase subunit L | Back alignment and domain information |
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>PRK13236 nitrogenase reductase; Reviewed | Back alignment and domain information |
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>pfam07015 VirC1 VirC1 protein | Back alignment and domain information |
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>PRK13234 nifH nitrogenase reductase; Reviewed | Back alignment and domain information |
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>TIGR01287 nifH nitrogenase iron protein; InterPro: IPR005977 The enzyme responsible for nitrogen fixation, the nitrogenase, shows a high degree of conservation of structure, function, and amino acid sequence across wide phylogenetic ranges | Back alignment and domain information |
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>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; InterPro: IPR005971 Synonym: dark protochlorophyllide reductase Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls | Back alignment and domain information |
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>PRK13849 putative crown gall tumor protein VirC1; Provisional | Back alignment and domain information |
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>COG4963 CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] | Back alignment and domain information |
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>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] | Back alignment and domain information |
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>COG1348 NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism] | Back alignment and domain information |
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>COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] | Back alignment and domain information |
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>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring | Back alignment and domain information |
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>TIGR00750 lao LAO/AO transport system ATPase; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components | Back alignment and domain information |
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>pfam01656 CbiA CobQ/CobB/MinD/ParA nucleotide binding domain | Back alignment and domain information |
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>cd02117 NifH_like This family contains the NifH (iron protein) of nitrogenase, L subunit (BchL/ChlL) of the protochlorophyllide reductase and the BchX subunit of the Chlorophyllide reductase | Back alignment and domain information |
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>cd03110 Fer4_NifH_child This protein family's function is unkown | Back alignment and domain information |
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>COG0489 Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
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>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily | Back alignment and domain information |
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>cd02038 FleN-like FleN is a member of the Fer4_NifH superfamily | Back alignment and domain information |
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>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA) | Back alignment and domain information |
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>TIGR02016 BchX chlorophyllide reductase iron protein subunit X; InterPro: IPR010246 This entry represents the X subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase , | Back alignment and domain information |
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>TIGR01005 eps_transp_fam exopolysaccharide transport protein family; InterPro: IPR005700 The bacterial exopolysaccharide transport protein is part of a large genetic locus which is associated with exopolysaccharide (EPS) biosynthesis | Back alignment and domain information |
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>PRK00090 bioD dithiobiotin synthetase; Reviewed | Back alignment and domain information |
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>pfam00448 SRP54 SRP54-type protein, GTPase domain | Back alignment and domain information |
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>TIGR00959 ffh signal recognition particle protein; InterPro: IPR004780 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes , | Back alignment and domain information |
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>PRK12374 putative dithiobiotin synthetase; Provisional | Back alignment and domain information |
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>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes | Back alignment and domain information |
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>PRK13896 cobyrinic acid a,c-diamide synthase; Provisional | Back alignment and domain information |
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>PRK10416 cell division protein FtsY; Provisional | Back alignment and domain information |
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>PRK00784 cobyric acid synthase; Provisional | Back alignment and domain information |
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>pfam03308 ArgK ArgK protein | Back alignment and domain information |
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>PRK01077 cobyrinic acid a,c-diamide synthase; Validated | Back alignment and domain information |
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>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated | Back alignment and domain information |
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>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] | Back alignment and domain information |
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>TIGR00313 cobQ cobyric acid synthase CobQ; InterPro: IPR004459 Cobyric acid synthase (CobQ) catalyses amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide in the biosynthesis of cobalamin | Back alignment and domain information |
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>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional | Back alignment and domain information |
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>PRK09435 arginine/ornithine transport system ATPase; Provisional | Back alignment and domain information |
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>PRK12724 flagellar biosynthesis regulator FlhF; Provisional | Back alignment and domain information |
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>PRK00771 signal recognition particle protein Srp54; Provisional | Back alignment and domain information |
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>PRK10867 signal recognition particle protein; Provisional | Back alignment and domain information |
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>PRK06995 flhF flagellar biosynthesis regulator FlhF; Validated | Back alignment and domain information |
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>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] | Back alignment and domain information |
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>COG1419 FlhF Flagellar GTP-binding protein [Cell motility and secretion] | Back alignment and domain information |
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>PRK12727 flagellar biosynthesis regulator FlhF; Provisional | Back alignment and domain information |
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>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] | Back alignment and domain information |
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>COG0132 BioD Dethiobiotin synthetase [Coenzyme metabolism] | Back alignment and domain information |
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>TIGR00064 ftsY signal recognition particle-docking protein FtsY; InterPro: IPR004390 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems | Back alignment and domain information |
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>TIGR00379 cobB cobyrinic acid a,c-diamide synthase; InterPro: IPR004484 This family describes cobyrinic acid a,c-diamide synthase, the cobB (cbiA in Salmonella) protein of cobalamin biosynthesis | Back alignment and domain information |
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>pfam07755 DUF1611 Protein of unknown function (DUF1611) | Back alignment and domain information |
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>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism] | Back alignment and domain information |
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>COG3367 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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>PRK06278 cobyrinic acid a,c-diamide synthase; Validated | Back alignment and domain information |
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>TIGR01007 eps_fam capsular exopolysaccharide family; InterPro: IPR005702 This family describes the capsular exopolysaccharide proteins in bacteria | Back alignment and domain information |
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>PRK11519 tyrosine kinase; Provisional | Back alignment and domain information |
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>PRK09841 cryptic autophosphorylating protein tyrosine kinase Etk; Provisional |
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