254780974

254780974

adenylosuccinate lyase

GeneID in NCBI database:8209996Locus tag:CLIBASIA_04375
Protein GI in NCBI database:254780974Protein Accession:YP_003065387.1
Gene range:-(970365, 971672)Protein Length:435aa
Gene description:adenylosuccinate lyase
COG prediction:[F] Adenylosuccinate lyase
KEGG prediction:purB, rpe; adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2]
SEED prediction:Adenylosuccinate lyase (EC 4.3.2.2)
Pathway involved in KEGG:Purine metabolism [PATH:las00230]
Alanine, aspartate and glutamate metabolism [PATH:las00250]
Subsystem involved in SEED:De Novo Purine Biosynthesis;
Purine conversions
sequencesequence profile

Prediction of Local Sequence Properties

SourceSummaryResult
scaler
NCBI Databasesequence
PSIPREDsecondary structure
SSPROsecondary structure
DISEMBLcoil and loop
DISEMBLflexible loop
SEGlow complexity
DISOPREDdisordered
DISEMBLmissing residues
DISPROdisordered
TMHMMnone TM-Helix
TOPPRED1 TM-Helix
HMMTOPnone TM-Helix
MEMSATnone TM-Helix
MEMSAT_SVMnone TM-Helix
PHOBIUSnone TM-Helix
SignalP_HMMno
SignalP_NNno
COILScoiled coil
70% MSAconservation map
90% MSAconservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-----
MIPRYSRTTMTTLWSLETKFRIWFEIEAHACDALAKLGVIPEKSSKNIWEKGRNAVFNVDRIMELDSIIKHDVIAFLTHLAEIIGPDARFIHQGMTSSDILDTCFSIQLMRSTDILLEDIDQLLESLKKRAFEYKDTLTIGRSHGIHAEPTTFGLKLAMAYAEFSRSRKRLLTAREEIAVCAISGSVGTFSNIHPYVEQHVADAMGLKTDPISSQVIARDRHAMYFSVLGVIASSIERVATEIRHLQRTEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSHVIPAMENVALWHERDISHSSVERVIGPDATIHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLALTQAGVSREEAYQLVQRNAMKVWKNGAIFLDVLLADVDIRKVLSEKEICDKFDYKYHTKHVNAIFERVFQMF
cccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHHHHcccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHcccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHccHHHHHHHHHHHHHHHHHHc
cccHcccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccEccEcccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccHcHcccccccHHHEEccHHHHHHHHHHHHHHHHHHHccEcHHHHHHHHHccccEEEcHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHcHHHHHHccHHHHHHHccHHHHHHHHHHHHHHHHHHc
miprysrttMTTLWSLETKFRIWFEIEAHACDALAklgvipekssknIWEKGRNAVFNVDRIMELDSIIKHDVIAFLTHLAEiigpdarfihqgmtssdiLDTCFSIQLMRSTDILLEDIDQLLESLKKRAFEYKdtltigrshgihaepttFGLKLAMAYAEFSRSRKRLLTAREEIAVCAisgsvgtfsnihpyVEQHVADamglktdpissqviarDRHAMYFSVLGVIASSIERVATEIRHLQRTeileveeffhpgqkgsssmphkrnpiltenlTGLSRLIRSHVIPAMENVALWHerdishssvervigpdatIHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLALTQAGVSREEAYQLVQRNAMKVWKNGAIFLDVLLADVDIRKVLSEKeicdkfdykyhTKHVNAIFERVFQMF
miprysrttmttlWSLETKFRIWFEIEAHACDALAKLgvipeksskniwekgrnAVFNVDRIMELDSIIKHDVIAFLTHLAEIIGPDARFIHQGMTSSDILDTCFSIQLMRSTDILLEDIDQLLESLKKRAFEYKDtltigrshgihaepTTFGLKLAMAYAEFSRSRKRLLTAREEIAVCAisgsvgtfsNIHPYVEQHVADAMGLKTDPISSQVIARDRHAMYFSVLGVIASSIERVATEIRHLQRTEILEVEEFFHPGqkgsssmphkrnpILTENLTGLSRLIRSHVIPAMENVALWHERDISHSSVERVIGPDATIHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLALTQAGVSREEAYQLVQRNAMKVWKNGAIFLDVLLADVDIRKVLSEKeicdkfdykyhTKHVNAIFERVFQMF
MIPRYSRTTMTTLWSLETKFRIWFEIEAHACDALAKLGVIPEKSSKNIWEKGRNAVFNVDRIMELDSIIKHDVIAFLTHLAEIIGPDARFIHQGMTSSDILDTCFSIQLMRSTdilledidqlleslKKRAFEYKDTLTIGRSHGIHAEPTTFGLKLAMAYAEFSRSRKRLLTAREEIAVCAISGSVGTFSNIHPYVEQHVADAMGLKTDPISSQVIARDRHAMYFSVLGVIASSIERVATEIRHLQRTEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSHVIPAMENVALWHERDISHSSVERVIGPDATIHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLALTQAGVSREEAYQLVQRNAMKVWKNGAIFLDVLLADVDIRKVLSEKEICDKFDYKYHTKHVNAIFERVFQMF
MIPRYSRTTMTTLWSLETKFRIWFEIEAHACDALAKLGVIPEKSSKNIWEKGRNAVFNVDRIMELDSIIKHDVIAFLTHLAEIIGPDARFIHQGMTSSDILDTCFSIQLMRSTDILLEDIDQLLESLKKRAFEYKDTLTIGRSHGIHAEPTTFGLKLAMAYAEFSRSRKRLLTAREEIAVCAISGSVGTFSNIHPYVEQHVADAMGLKTDPISSQVIARDRHAMYFSVLGVIASSIERVATEIRHLQRTEILEVEE*************HKRNPILTENLTGLSRLIRSHVIPAMENVALWHERDISHSSVERVIGPDATIHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLALTQAGVSREEAYQLVQRNAMKVWKNGAIFLDVLLADVDIRKVLSEKEICDKFDYKYHTKHVNAIFERVFQMF
********TMTTLWSLETKFRIWFEIEAHACDALAKLGVIPEKSSKNIWEKGRNAVFNVDRIMELDSIIKHDVIAFLTHLAEIIGPDARFIHQGMTSSDILDTCFSIQLMRSTDILLEDIDQLLESLKKRAFEYKDTLTIGRSHGIHAEPTTFGLKLAMAYAEFSRSRKRLLTAREEIAVCAISGSVGTFSNIHPYVEQHVADAMGLKTDPISSQVIARDRHAMYFSVLGVIASSIERVATEIRHLQRTEILEVEEFFHP*********HKRNPILTENLTGLSRLIRSHVIPAMENVALWHERDISHSSVERVIGPDATIHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLALTQAGVSREEAYQLVQRNAMKVWKNGAIFLDVLLADVDIRKVLSEKEICDKFDYKYHTKHVNAIFERVFQMF
MIPRYSRTTMTTLWSLETKFRIWFEIEAHACDALAKLGVIPEKSSKNIWEKGRNAVFNVDRIMELDSIIKHDVIAFLTHLAEIIGPDARFIHQGMTSSDILDTCFSIQLMRSTDILLEDIDQLLESLKKRAFEYKDTLTIGRSHGIHAEPTTFGLKLAMAYAEFSRSRKRLLTAREEIAVCAISGSVGTFSNIHPYVEQHVADAMGLKTDPISSQVIARDRHAMYFSVLGVIASSIERVATEIRHLQRTEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSHVIPAMENVALWHERDISHSSVERVIGPDATIHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLALTQAGVSREEAYQLVQRNAMKVWKNGAIFLDVLLADVDIRKVLSEKEICDKFDYKYHTKHVNAIFERVFQMF
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MIPRYSRTTMTTLWSLETKFRIWFEIEAHACDALAKLGVIPEKSSKNIWEKGRNAVFNVDRIMELDSIIKHDVIAFLTHLAEIIGPDARFIHQGMTSSDILDTCFSIQLMRSTDILxxxxxxxxxxxxxxxxxxxxxLTIGRSHGIHAEPTTFGLKLAMAYAEFSRSRKRLLTAREEIAVCAISGSVGTFSNIHPYVEQHVADAMGLKTDPISSQVIARDRHAMYFSVLGVIASSIERVATEIRHLQRTEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSHVIPAMENVALWHERDISHSSVERVIGPDATIHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLALTQAGVSREEAYQLVQRNAMKVWKNGAIFLDVLLADVDIRKVLSEKEICDKFDYKYHTKHVNAIFERVFQMF
MIPRYSRTTMTTLWSLETKFRIWFEIEAHACDALAKLGVIPEKSSKNIWEKGRNAVFNVDRIMELDSIIKHDVIAFLTHLAEIIGPDARFIHQGMTSSDILDTCFSIQLMRSTDILLEDIDQLLESLKKRAFEYKDTLTIGRSHGIHAEPTTFGLKLAMAYAEFSRSRKRLLTAREEIAVCAISGSVGTFSNIHPYVEQHVADAMGLKTDPISSQVIARDRHAMYFSVLGVIASSIERVATEIRHLQRTEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSHVIPAMENVALWHERDISHSSVERVIGPDATIHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLALTQAGVSREEAYQLVQRNAMKVWKNGAIFLDVLLADVDIRKVLSEKEICDKFDYKYHTKHVNAIFERVFQMF
MIPRYSRTTMTTLWSLETKFRIWFEIEAHACDALAKLGVIPEKSSKNIWEKGRNAVFNVDRIMELDSIIKHDVIAFLTHLAEIIGPDARFIHQGMTSSDILDTCFSIQLMRSTDILLEDIDQLLESLKKRAFEYKDTLTIGRSHGIHAEPTTFGLKLAMAYAEFSRSRKRLLTAREEIAVCAISGSVGTFSNIHPYVEQHVADAMGLKTDPISSQVIARDRHAMYFSVLGVIASSIERVATEIRHLQRTEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSHVIPAMENVALWHERDISHSSVERVIGPDATIHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLALTQAGVSREEAYQLVQRNAMKVWKNGAIFLDVLLADVDIRKVLSEKEICDKFDYKYHTKHVNAIFERVFQMF

Close Homologs Detected by BLAST or PSI-BLAST

Homolog within the Genome Detected by BLAST

IdentityAlignment graphLength Definition E-value
Target435 adenylosuccinate lyase [Candidatus Liberibacter asiatic
254780370473 argininosuccinate lyase [Candidatus Liberibacter a 2e-09
254780190463 fumarate hydratase [Candidatus Liberibacter asiati 2e-09
>gi|254780370|ref|YP_003064783.1| argininosuccinate lyase [Candidatus Liberibacter asiaticus str. psy62] Length = 473 Back     alignment
 Score = 55.5 bits (132), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 147/358 (41%), Gaps = 32/358 (8%)

Query: 34  LAKLGVIPEKSSKNIWEKGR-------NAVFNVDRIMELDSIIKHDVIAFLTHLAEIIGP 86
           LAK G+I  + ++ I E  +       +  F   R +E    I  ++ A LT L   IG 
Sbjct: 54  LAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLE---DIHMNIEARLTSL---IGS 107

Query: 87  DARFIHQGMTSSDILDTCFSIQLMRSTDILLEDIDQLLESLKKRAFEYKDTLTIGRSHGI 146
            A  +H   + +D +     + +   T  +  D+ +LL  L  +A E+ +T+  G +H  
Sbjct: 108 IAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQ 167

Query: 147 HAEPTTFGLKLAMAYAE-FSRSRKRLLTAREEIAVCAISGSVGTFSNIHPYVEQHVADAM 205
            A+P TFG    MAY E F R   R   + E +  C + G+        P      A  +
Sbjct: 168 TAQPVTFG-HHCMAYVEMFGRDISRFFDSIERLDECPL-GAAALAGTSFPIDRHFTAKEL 225

Query: 206 GLKTDPISS--QVIARDRHAMYFSVLGVIASSIERVATEIRHLQRTEILEVEEFFHPGQK 263
           G +    +S   V  RD      S   + A  + R+A EI  L  T              
Sbjct: 226 GFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEII-LWSTPQFNFVRLSDAFST 284

Query: 264 GSSSMPHKRNPILTENLTGLSRLIRS---HVIPAMENVALWHERDISHSSVERVIGPDAT 320
           GSS MP KRNP   E +   +  I      ++  M+ + L + +D+     E V   DA 
Sbjct: 285 GSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDK-EPVF--DAL 341

Query: 321 IHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLA---LTQAGVSREEAY 375
             L   +  +  +IE+L V     KD L++     HS    LA   ++ AG+   EA+
Sbjct: 342 ETLQIIILAISAMIEDLTVN----KDRLQEAATKSHSTATDLADWLVSHAGLPFREAH 395

>gi|254780190|ref|YP_003064603.1| fumarate hydratase [Candidatus Liberibacter asiaticus str. psy62] Length = 463 Back     alignment
 Score = 55.1 bits (131), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 103/246 (41%), Gaps = 16/246 (6%)

Query: 48  IWEKGRNAVFNVDRIMELDSIIKHDVIAFLTHLAEIIGPDARFIHQGM--TSSDILDTCF 105
           +W+ G     N    M ++ +I +  I  L  +     P     H  +  +S+D   T  
Sbjct: 93  VWQTGSGTQSN----MNVNEVISNRAIEILGGVMGSKSPVHPNDHVNLCQSSNDTYPTAI 148

Query: 106 SIQLM-RSTDILLEDIDQLLESLKKRAFEYKDTLTIGRSHGIHAEPTTFGLKLAMAYAEF 164
            I    R    LL  +  L  +L K+  +++D + IGR+H   A P T G + +    + 
Sbjct: 149 HIACAERIVHRLLPTLRNLHVALTKKISDFQDIIKIGRTHTQDATPLTLGQEFSGYATQV 208

Query: 165 SRSRKRLLTAREEIAVCAISGS-VGTFSN----IHPYVEQHVADAMGLK--TDPISSQVI 217
             S KR+    + +   A  G+ VGT  N        V Q++ D  GL   T P   + +
Sbjct: 209 KNSIKRIEMTLDGLYELAQGGTAVGTGLNTPVGFAEKVAQNIRDITGLPFITAPNKFEAL 268

Query: 218 A-RDRHAMYFSVLGVIASSIERVATEIRHLQRTEILEVEEFFHP-GQKGSSSMPHKRNPI 275
           A  D  A     +   A+++ ++A +IR L       + E   P  + GSS MP K NP 
Sbjct: 269 ACHDAIAFCHGAINTSATALFKIANDIRFLGSGPRSGLGELMLPENEPGSSIMPGKVNPT 328

Query: 276 LTENLT 281
             E +T
Sbjct: 329 QCEAIT 334

Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations

IdentityAlignment graphLength Definition Round E-value
Target435 adenylosuccinate lyase [Candidatus Liberibacter asiatic
315122608435 adenylosuccinate lyase [Candidatus Liberibacter solanac 1 0.0
116252347435 adenylosuccinate lyase [Rhizobium leguminosarum bv. vic 1 0.0
241204848435 adenylosuccinate lyase [Rhizobium leguminosarum bv. tri 1 0.0
218682714433 adenylosuccinate lyase [Rhizobium etli CIAT 894] Length 1 0.0
86357888435 adenylosuccinate lyase [Rhizobium etli CFN 42] Length = 1 0.0
327190554435 adenylosuccinate lyase [Rhizobium etli CNPAF512] Length 1 0.0
209549515435 adenylosuccinate lyase [Rhizobium leguminosarum bv. tri 1 0.0
190891973435 adenylosuccinate lyase [Rhizobium etli CIAT 652] Length 1 0.0
150396705435 adenylosuccinate lyase [Sinorhizobium medicae WSM419] L 1 0.0
222086127433 adenylosuccinate lyase [Agrobacterium radiobacter K84] 1 0.0
>gi|315122608|ref|YP_004063097.1| adenylosuccinate lyase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 435 Back     alignment and organism information
 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/433 (86%), Positives = 415/433 (95%)

Query: 1   MIPRYSRTTMTTLWSLETKFRIWFEIEAHACDALAKLGVIPEKSSKNIWEKGRNAVFNVD 60
           MIPRYSRT MT +WS ETK+RIWFEIEAHACDALA++G+IP+++++NIW+KG+NAVFNV+
Sbjct: 1   MIPRYSRTKMTAIWSPETKYRIWFEIEAHACDALAEIGIIPKEAAQNIWKKGKNAVFNVE 60

Query: 61  RIMELDSIIKHDVIAFLTHLAEIIGPDARFIHQGMTSSDILDTCFSIQLMRSTDILLEDI 120
           RI +L+SIIKHDVIAFLTHLAEIIGPDARFIHQGMTSSD+LDTCFSIQLMRSTDILLEDI
Sbjct: 61  RIDKLESIIKHDVIAFLTHLAEIIGPDARFIHQGMTSSDVLDTCFSIQLMRSTDILLEDI 120

Query: 121 DQLLESLKKRAFEYKDTLTIGRSHGIHAEPTTFGLKLAMAYAEFSRSRKRLLTAREEIAV 180
           DQLLESLKKRAFE+KDT+TIGRSHGIHAEPTTFGLKLAMAYAEFSR+R+RLL AREEIA+
Sbjct: 121 DQLLESLKKRAFEHKDTITIGRSHGIHAEPTTFGLKLAMAYAEFSRARQRLLNAREEIAI 180

Query: 181 CAISGSVGTFSNIHPYVEQHVADAMGLKTDPISSQVIARDRHAMYFSVLGVIASSIERVA 240
           CAISGS+GTFSNI PYVEQHVA AM LK DPISSQ+I RDRHAMYFSVLGVIASSIER+A
Sbjct: 181 CAISGSIGTFSNIDPYVEQHVAKAMNLKADPISSQIIPRDRHAMYFSVLGVIASSIERLA 240

Query: 241 TEIRHLQRTEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSHVIPAMENVAL 300
            EIRHLQRTEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSHVIP+MENVAL
Sbjct: 241 IEIRHLQRTEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSHVIPSMENVAL 300

Query: 301 WHERDISHSSVERVIGPDATIHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRI 360
           WHERDISHSSVER IGPDATIHLDFALNRL NV+EEL+VYP+NM +NLE+L+GLIHSQRI
Sbjct: 301 WHERDISHSSVERAIGPDATIHLDFALNRLTNVMEELIVYPDNMINNLEKLRGLIHSQRI 360

Query: 361 LLALTQAGVSREEAYQLVQRNAMKVWKNGAIFLDVLLADVDIRKVLSEKEICDKFDYKYH 420
           LLALTQAGVSRE+AYQLVQRNAMKVWKNG +FLD LLAD+DIRK+LSE+EI DKFDYKYH
Sbjct: 361 LLALTQAGVSREDAYQLVQRNAMKVWKNGTVFLDELLADIDIRKILSEEEIRDKFDYKYH 420

Query: 421 TKHVNAIFERVFQ 433
           TKHV+ IF+RVF+
Sbjct: 421 TKHVDTIFKRVFK 433


Species: Candidatus Liberibacter solanacearum
Genus: Candidatus Liberibacter
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria
>gi|116252347|ref|YP_768185.1| adenylosuccinate lyase [Rhizobium leguminosarum bv. viciae 3841] Length = 435 Back     alignment and organism information
>gi|241204848|ref|YP_002975944.1| adenylosuccinate lyase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 435 Back     alignment and organism information
>gi|218682714|ref|ZP_03530315.1| adenylosuccinate lyase [Rhizobium etli CIAT 894] Length = 433 Back     alignment and organism information
>gi|86357888|ref|YP_469780.1| adenylosuccinate lyase [Rhizobium etli CFN 42] Length = 435 Back     alignment and organism information
>gi|327190554|gb|EGE57648.1| adenylosuccinate lyase [Rhizobium etli CNPAF512] Length = 435 Back     alignment and organism information
>gi|209549515|ref|YP_002281432.1| adenylosuccinate lyase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 435 Back     alignment and organism information
>gi|190891973|ref|YP_001978515.1| adenylosuccinate lyase [Rhizobium etli CIAT 652] Length = 435 Back     alignment and organism information
>gi|150396705|ref|YP_001327172.1| adenylosuccinate lyase [Sinorhizobium medicae WSM419] Length = 435 Back     alignment and organism information
>gi|222086127|ref|YP_002544659.1| adenylosuccinate lyase [Agrobacterium radiobacter K84] Length = 433 Back     alignment and organism information

Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch

Conserved Domains in CDD Database Detected by RPS-BLAST

IdentityAlignment graphLength Definition E-value
Target435 adenylosuccinate lyase [Candidatus Liberibacter asiatic
PRK07492435 PRK07492, PRK07492, adenylosuccinate lyase; Provisional 0.0
PRK08470442 PRK08470, PRK08470, adenylosuccinate lyase; Provisional 1e-158
PRK07380431 PRK07380, PRK07380, adenylosuccinate lyase; Provisional 1e-152
COG0015438 COG0015, PurB, Adenylosuccinate lyase [Nucleotide trans 1e-147
TIGR00928435 TIGR00928, purB, adenylosuccinate lyase 1e-137
PRK08540449 PRK08540, PRK08540, adenylosuccinate lyase; Reviewed 1e-114
PRK06390451 PRK06390, PRK06390, adenylosuccinate lyase; Provisional 7e-83
cd01597437 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate 1e-82
KOG2700481 KOG2700, KOG2700, KOG2700, Adenylosuccinate lyase [Nucl 1e-66
PRK09053452 PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cycloiso 3e-37
COG0165459 COG0165, ArgH, Argininosuccinate lyase [Amino acid tran 8e-22
cd01360387 cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase 1e-179
cd01595381 cd01595, Adenylsuccinate_lyase_like, Adenylsuccinate ly 1e-141
cd03302436 cd03302, Adenylsuccinate_lyase_2, Adenylsuccinate lyase 3e-49
cd01598425 cd01598, PurB, PurB_like adenylosuccinases (adenylsucci 3e-23
PRK09285456 PRK09285, PRK09285, adenylosuccinate lyase; Provisional 8e-17
COG1027471 COG1027, AspA, Aspartate ammonia-lyase [Amino acid tran 3e-16
cd01359435 cd01359, Argininosuccinate_lyase, Argininosuccinate lya 1e-15
cd01334325 cd01334, Lyase_I, Lyase class I family; a group of prot 7e-85
PLN02848458 PLN02848, PLN02848, adenylosuccinate lyase 2e-13
PRK14515479 PRK14515, PRK14515, aspartate ammonia-lyase; Provisiona 6e-08
PRK08937216 PRK08937, PRK08937, adenylosuccinate lyase; Provisional 4e-63
pfam00206312 pfam00206, Lyase_1, Lyase 2e-45
TIGR02426338 TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-muconate cy 4e-34
PRK05975351 PRK05975, PRK05975, 3-carboxy-cis,cis-muconate cycloiso 2e-15
PRK00855459 PRK00855, PRK00855, argininosuccinate lyase; Provisiona 3e-13
TIGR00838455 TIGR00838, argH, argininosuccinate lyase 5e-13
cd01594231 cd01594, Lyase_I_like, Lyase class I_like superfamily: 4e-45
PRK13353473 PRK13353, PRK13353, aspartate ammonia-lyase; Provisiona 2e-13
cd01357450 cd01357, Aspartase, Aspartase 1e-11
PRK12273472 PRK12273, aspA, aspartate ammonia-lyase; Provisional 7e-09
pfam1039781 pfam10397, ADSL_C, Adenylosuccinate lyase C-terminus 1e-25
COG0114462 COG0114, FumC, Fumarase [Energy production and conversi 5e-13
TIGR00839468 TIGR00839, aspA, aspartate ammonia-lyase 4e-11
PRK02186887 PRK02186, PRK02186, argininosuccinate lyase; Provisiona 9e-09
PRK00485464 PRK00485, fumC, fumarate hydratase; Reviewed 9e-08
PLN02646474 PLN02646, PLN02646, argininosuccinate lyase 3e-07
PLN00134458 PLN00134, PLN00134, fumarate hydratase; Provisional 2e-06
PRK12308 614 PRK12308, PRK12308, bifunctional argininosuccinate lyas 8e-06
PRK12425464 PRK12425, PRK12425, fumarate hydratase; Provisional 5e-05
PRK06705502 PRK06705, PRK06705, argininosuccinate lyase; Provisiona 0.001
KOG1317487 KOG1317, KOG1317, KOG1317, Fumarase [Energy production 8e-12
TIGR00979458 TIGR00979, fumC_II, fumarate hydratase, class II 3e-11
cd01596450 cd01596, Aspartase_like, aspartase (L-aspartate ammonia 2e-11
cd01362455 cd01362, Fumarase_classII, Class II fumarases 5e-09
KOG1316464 KOG1316, KOG1316, KOG1316, Argininosuccinate lyase [Ami 1e-06
>gnl|CDD|181000 PRK07492, PRK07492, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|181437 PRK08470, PRK08470, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|180954 PRK07380, PRK07380, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|30365 COG0015, PurB, Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|162114 TIGR00928, purB, adenylosuccinate lyase Back     alignment and domain information
>gnl|CDD|181463 PRK08540, PRK08540, adenylosuccinate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|180551 PRK06390, PRK06390, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|176469 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like Back     alignment and domain information
>gnl|CDD|37911 KOG2700, KOG2700, KOG2700, Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|181627 PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>gnl|CDD|30514 COG0165, ArgH, Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|176464 cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1 Back     alignment and domain information
>gnl|CDD|176467 cd01595, Adenylsuccinate_lyase_like, Adenylsuccinate lyase (ASL)_like Back     alignment and domain information
>gnl|CDD|176471 cd03302, Adenylsuccinate_lyase_2, Adenylsuccinate lyase (ASL)_subgroup 2 Back     alignment and domain information
>gnl|CDD|176470 cd01598, PurB, PurB_like adenylosuccinases (adenylsuccinate lyase, ASL) Back     alignment and domain information
>gnl|CDD|181757 PRK09285, PRK09285, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|31230 COG1027, AspA, Aspartate ammonia-lyase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|176463 cd01359, Argininosuccinate_lyase, Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>gnl|CDD|176461 cd01334, Lyase_I, Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|178440 PLN02848, PLN02848, adenylosuccinate lyase Back     alignment and domain information
>gnl|CDD|184723 PRK14515, PRK14515, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|181586 PRK08937, PRK08937, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|143963 pfam00206, Lyase_1, Lyase Back     alignment and domain information
>gnl|CDD|162853 TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-muconate cycloisomerase Back     alignment and domain information
>gnl|CDD|168324 PRK05975, PRK05975, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>gnl|CDD|179143 PRK00855, PRK00855, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|129918 TIGR00838, argH, argininosuccinate lyase Back     alignment and domain information
>gnl|CDD|176466 cd01594, Lyase_I_like, Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|183992 PRK13353, PRK13353, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|176462 cd01357, Aspartase, Aspartase Back     alignment and domain information
>gnl|CDD|183393 PRK12273, aspA, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|150980 pfam10397, ADSL_C, Adenylosuccinate lyase C-terminus Back     alignment and domain information
>gnl|CDD|30463 COG0114, FumC, Fumarase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|162062 TIGR00839, aspA, aspartate ammonia-lyase Back     alignment and domain information
>gnl|CDD|167327 PRK02186, PRK02186, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|179045 PRK00485, fumC, fumarate hydratase; Reviewed Back     alignment and domain information
>gnl|CDD|178252 PLN02646, PLN02646, argininosuccinate lyase Back     alignment and domain information
>gnl|CDD|177743 PLN00134, PLN00134, fumarate hydratase; Provisional Back     alignment and domain information
>gnl|CDD|183425 PRK12308, PRK12308, bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>gnl|CDD|171490 PRK12425, PRK12425, fumarate hydratase; Provisional Back     alignment and domain information
>gnl|CDD|180664 PRK06705, PRK06705, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|36531 KOG1317, KOG1317, KOG1317, Fumarase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|130052 TIGR00979, fumC_II, fumarate hydratase, class II Back     alignment and domain information
>gnl|CDD|176468 cd01596, Aspartase_like, aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes Back     alignment and domain information
>gnl|CDD|176465 cd01362, Fumarase_classII, Class II fumarases Back     alignment and domain information
>gnl|CDD|36530 KOG1316, KOG1316, KOG1316, Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information

Conserved Domains in CDD Database Detected by HHsearch

IdentityAlignment graphLength Definition Probability
Target 435 adenylosuccinate lyase [Candidatus Liberibacter asiatic
PRK07492433 adenylosuccinate lyase; Provisional 100.0
PRK08470442 adenylosuccinate lyase; Provisional 100.0
PRK07380431 adenylosuccinate lyase; Provisional 100.0
TIGR00928469 purB adenylosuccinate lyase; InterPro: IPR004769 A numb 100.0
PRK09053452 3-carboxy-cis,cis-muconate cycloisomerase; Provisional 100.0
COG0015438 PurB Adenylosuccinate lyase [Nucleotide transport and m 100.0
PRK08540449 adenylosuccinate lyase; Reviewed 100.0
cd01597437 pCLME pCLME: prokaryotic 3-carboxy-cis,cis-muconate cyc 100.0
cd03302436 Adenylsuccinate_lyase_2 Adenylsuccinate lyase_2: Adenyl 100.0
PRK06390451 adenylosuccinate lyase; Provisional 100.0
PRK08937425 adenylosuccinate lyase; Provisional 100.0
TIGR00838469 argH argininosuccinate lyase; InterPro: IPR009049 This 100.0
cd01359435 Argininosuccinate_lyase Argininosuccinate lyase (argini 100.0
PRK00855459 argininosuccinate lyase; Provisional 100.0
PRK04833455 argininosuccinate lyase; Provisional 100.0
PRK09285456 adenylosuccinate lyase; Provisional 100.0
PRK06705502 argininosuccinate lyase; Provisional 100.0
cd01598425 PurB PurB: PurB_like adenylosuccinases (adenylsuccinate 100.0
PRK12308 614 bifunctional argininosuccinate lyase/N-acetylglutamate 100.0
COG0165459 ArgH Argininosuccinate lyase [Amino acid transport and 100.0
PRK13353473 aspartate ammonia-lyase; Provisional 100.0
PRK00485462 fumC fumarate hydratase; Reviewed 100.0
cd01362455 Fumarase_classII Class II fumarases. This group contain 100.0
PRK02186892 argininosuccinate lyase; Provisional 100.0
cd01357450 Aspartatase Aspartase_like. This group contains protein 100.0
KOG2700481 consensus 100.0
TIGR00979459 fumC_II fumarate hydratase, class II; InterPro: IPR0056 100.0
PRK12273471 aspA aspartate ammonia-lyase; Provisional 100.0
cd01596450 Aspartatase_like Aspartase_like. This group contains pr 100.0
PRK12425464 fumarate hydratase; Provisional 100.0
PRK06389434 argininosuccinate lyase; Provisional 100.0
COG0114462 FumC Fumarase [Energy production and conversion] 100.0
KOG1316464 consensus 100.0
TIGR00839469 aspA aspartate ammonia-lyase; InterPro: IPR004708 A num 100.0
COG1027471 AspA Aspartate ammonia-lyase [Amino acid transport and 100.0
KOG1317487 consensus 100.0
cd01360387 Adenylsuccinate_lyase_1 Adenylsuccinate lyase_1: Adenyl 100.0
cd01595381 Adenylsuccinate_lyase_like Adenylsuccinate lyase_like ( 100.0
PRK05975353 3-carboxy-cis,cis-muconate cycloisomerase; Provisional 100.0
TIGR02426351 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase 100.0
cd01334330 Lyase_I Lyase class I family of the Lyase_I superfamily 100.0
cd01594231 Lyase_I_like Lyase class I_like. Lyase class I_like sup 100.0
pfam00206312 Lyase_1 Lyase. 100.0
pfam1039781 ADSL_C Adenylosuccinate lyase C-terminus. This is the C 99.74
pfam1041555 FumaraseC_C Fumarase C C-terminus. Fumarase C catalyses 98.05
pfam08328115 ASL_C Adenylosuccinate lyase C-terminal. This domain is 98.34
KOG2700481 consensus 97.69
>PRK07492 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK08470 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK07380 adenylosuccinate lyase; Provisional Back     alignment and domain information
>TIGR00928 purB adenylosuccinate lyase; InterPro: IPR004769 A number of enzymes, belonging to the lyase class, for which fumarate is a substrate have been shown , to share a short conserved sequence around a methionine which is probably involved in the catalytic activity of this type of enzymes Back     alignment and domain information
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK08540 adenylosuccinate lyase; Reviewed Back     alignment and domain information
>cd01597 pCLME pCLME: prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like This group contains proteins similar to pCLME, a member of the Lyase class I family Back     alignment and domain information
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase_2: Adenylsuccinate lyase (ASL)_subgroup 2 Back     alignment and domain information
>PRK06390 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK08937 adenylosuccinate lyase; Provisional Back     alignment and domain information
>TIGR00838 argH argininosuccinate lyase; InterPro: IPR009049 This entry represents argininosuccinate lyase, but may include examples of avian delta crystallins, in which argininosuccinate lyase activity may or may not be present and the biological role is to provide the optically clear cellular protein of the eye lens Back     alignment and domain information
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>PRK00855 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK04833 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK09285 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK06705 argininosuccinate lyase; Provisional Back     alignment and domain information
>cd01598 PurB PurB: PurB_like adenylosuccinases (adenylsuccinate lyase, ASL) Back     alignment and domain information
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13353 aspartate ammonia-lyase; Provisional Back     alignment and domain information
>PRK00485 fumC fumarate hydratase; Reviewed Back     alignment and domain information
>cd01362 Fumarase_classII Class II fumarases Back     alignment and domain information
>PRK02186 argininosuccinate lyase; Provisional Back     alignment and domain information
>cd01357 Aspartatase Aspartase_like Back     alignment and domain information
>KOG2700 consensus Back     alignment and domain information
>TIGR00979 fumC_II fumarate hydratase, class II; InterPro: IPR005677 Fumarase C catalyzes the stereospecific interconversion of fumarate to L-malate as part of the metabolic citric acid or Kreb's cycle Back     alignment and domain information
>PRK12273 aspA aspartate ammonia-lyase; Provisional Back     alignment and domain information
>cd01596 Aspartatase_like Aspartase_like Back     alignment and domain information
>PRK12425 fumarate hydratase; Provisional Back     alignment and domain information
>PRK06389 argininosuccinate lyase; Provisional Back     alignment and domain information
>COG0114 FumC Fumarase [Energy production and conversion] Back     alignment and domain information
>KOG1316 consensus Back     alignment and domain information
>TIGR00839 aspA aspartate ammonia-lyase; InterPro: IPR004708 A number of enzymes, belonging to the lyase class, for which fumarate is a substrate have been shown , to share a short conserved sequence around a methionine which is probably involved in the catalytic activity of this type of enzymes Back     alignment and domain information
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1317 consensus Back     alignment and domain information
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase_1: Adenylsuccinate lyase (ASL)_subgroup 1 Back     alignment and domain information
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase_like (ASL_like): This subgroup contains proteins similar to ASL and prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE) Back     alignment and domain information
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase; InterPro: IPR012789 Proteins in this entry are 3-carboxy-cis,cis-muconate cycloisomerases, which catalyse the second step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA Back     alignment and domain information
>cd01334 Lyase_I Lyase class I family of the Lyase_I superfamily Back     alignment and domain information
>cd01594 Lyase_I_like Lyase class I_like Back     alignment and domain information
>pfam00206 Lyase_1 Lyase Back     alignment and domain information
>pfam10397 ADSL_C Adenylosuccinate lyase C-terminus Back     alignment and domain information
>pfam10415 FumaraseC_C Fumarase C C-terminus Back     alignment and domain information
>pfam08328 ASL_C Adenylosuccinate lyase C-terminal Back     alignment and domain information
>KOG2700 consensus Back     alignment and domain information

Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch

Homologous Structures Detected by PSI-BLAST against Nonredundant Database

IdentityAlignment graphLength Definition E-value
Target435 adenylosuccinate lyase [Candidatus Liberibacter asiatic
1f1o_A431 Structural Studies Of Adenylosuccinate Lyases Lengt 3e-86
2pfm_A444 Crystal Structure Of Adenylosuccinate Lyase (Purb) 8e-85
2x75_A431 Staphylococcus Aureus Adenylosuccinate Lyase Length 1e-84
1c3u_A431 T. Maritima Adenylosuccinate Lyase Length = 431 1e-80
1c3c_A429 T. Maritima Adenylosuccinate Lyase Length = 429 9e-80
3c8t_A451 Crystal Structure Of Fumarate Lyase From Mesorhizob 2e-57
2vd6_A503 Human Adenylosuccinate Lyase In Complex With Its Su 3e-57
2j91_A503 Crystal Structure Of Human Adenylosuccinate Lyase I 4e-57
1q5n_A454 Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate 4e-54
1re5_A450 Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lac 3e-51
2e9f_B454 Crystal Structure Of T.Th.Hb8 Argininosuccinate Lya 2e-36
1tj7_A457 Structure Determination And Refinement At 2.44 A Re 2e-36
2e9f_A462 Crystal Structure Of T.Th.Hb8 Argininosuccinate Lya 2e-36
1hy1_A468 Crystal Structure Of Wild Type Duck Delta 2 Crystal 4e-33
1xwo_A465 Crystal Structrue Of Goose Delta Crystallin Length 1e-32
1dcn_A447 Inactive Mutant H162n Of Delta 2 Crystallin With Bo 1e-32
1tjv_A474 Crystal Structure Of T161d Duck Delta 2 Crystallin 2e-32
1tju_A474 Crystal Structure Of T161s Duck Delta 2 Crystallin 2e-32
3gzh_A482 Crystal Structure Of Phosphate-Bound Adenylosuccina 2e-32
1k7w_A468 Crystal Structure Of S283a Duck Delta 2 Crystallin 2e-32
1u15_A472 Crystal Structure Of A Duck-Delta-Crystallin-1 Doub 2e-32
1dof_A403 The Crystal Structure Of Adenylosuccinate Lyase Fro 4e-32
1aos_A464 Human Argininosuccinate Lyase Length = 464 6e-32
1auw_A468 H91n Delta 2 Crystallin From Duck Length = 468 8e-32
1k62_A464 Crystal Structure Of The Human Argininosuccinate Ly 9e-32
2ptq_A462 Crystal Structure Of Escherichia Coli Adenylosuccin 9e-32
2ptr_A462 Crystal Structure Of Escherichia Coli Adenylosuccin 1e-31
1yis_A478 Structural Genomics Of Caenorhabditis Elegans: Aden 5e-31
1hy0_A466 Crystal Structure Of Wild Type Duck Delta 1 Crystal 2e-30
2pts_A462 Crystal Structure Of Wild Type Escherichia Coli Ade 3e-30
2qga_B465 Plasmodium Vivax Adenylosuccinate Lyase Pv003765 Wi 5e-26
3e04_A490 Crystal Structure Of Human Fumarate Hydratase Lengt 7e-26
1kq7_A467 E315q Mutant Form Of Fumarase C From E.Coli Length 1e-25
2hvg_A482 Crystal Structure Of Adenylosuccinate Lyase From Pl 2e-25
2fus_A467 Mutations Of Fumarase That Distinguish Between The 3e-25
1fuo_A467 Fumarase C With Bound Citrate Length = 467 4e-25
1fur_A467 Fumarase Mutant H188n With Bound Substrate L-Malate 5e-25
1vdk_A466 Crystal Structure Of Fumarase From Thermus Thermoph 6e-25
1i0a_A466 Crystal Structure Of Wild Type Turkey Delta 1 Cryst 9e-25
1fup_A472 Fumarase With Bound Pyromellitic Acid Length = 472 2e-24
1yfm_A488 Recombinant Yeast Fumarase Length = 488 4e-24
1j3u_A468 Crystal Structure Of Aspartase From Bacillus Sp. Ym 4e-24
1jsw_A478 Native L-Aspartate Ammonia Lyase Length = 478 7e-23
3bhg_A459 Crystal Structure Of Adenylosuccinate Lyase From Le 9e-23
3gtd_A482 2.4 Angstrom Crystal Structure Of Fumarate Hydratas 1e-20
3ocf_A478 Crystal Structure Of Fumarate Lyase:delta Crystalli 5e-20
3oce_A474 Crystal Structure Of Fumarate Lyase:delta Crystalli 5e-20
3qbp_A478 Crystal Structure Of Fumarase Fum From Mycobacteriu 3e-17
3no9_A475 Crystal Structure Of Apo Fumarate Hydratase From My 1e-16
3rrp_A471 Crystal Structure Of Fumarate Hydratase Fum From My 1e-09
2fel_A359 3-Carboxy-Cis,Cis-Muconate Lactonizing Enzyme From 2e-15
gi|13096694|pdb|1F1O|A Chain A, Structural Studies Of Adenylosuccinate Lyases Length = 431 Back     alignment and structure
 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 219/431 (50%), Positives = 319/431 (74%), Gaps = 3/431 (0%)

Query: 1   MIPRYSRTTMTTLWSLETKFRIWFEIEAHACDALAKLGVIPEKSSKNIWEKGRNAVFNVD 60
           MI RYSR  M+ +W+ E +F+ W E+E  AC+A A+LGVIP++  K + E   NA F+++
Sbjct: 1   MIERYSRPEMSAIWTDENRFQAWLEVEILACEAWAELGVIPKEDVKVMRE---NASFDIN 57

Query: 61  RIMELDSIIKHDVIAFLTHLAEIIGPDARFIHQGMTSSDILDTCFSIQLMRSTDILLEDI 120
           RI+E++   +HDV+AF   ++E +G + +++H G+TS+D++DT  S  L ++ DILL+D+
Sbjct: 58  RILEIEKDTRHDVVAFTRAVSESLGEERKWVHYGLTSTDVVDTALSYLLKQANDILLKDL 117

Query: 121 DQLLESLKKRAFEYKDTLTIGRSHGIHAEPTTFGLKLAMAYAEFSRSRKRLLTAREEIAV 180
           ++ ++ +K++A E+K T+ +GR+HG+HAEPTTFGLKLA+ + E  R+ +R   A+  I V
Sbjct: 118 ERFVDIIKEKAKEHKYTVMMGRTHGVHAEPTTFGLKLALWHEEMKRNLERFKQAKAGIEV 177

Query: 181 CAISGSVGTFSNIHPYVEQHVADAMGLKTDPISSQVIARDRHAMYFSVLGVIASSIERVA 240
             ISG+VGT++NI P+VEQ+V + +GLK  PIS+Q + RDRHA Y + L +IA+SIE+ A
Sbjct: 178 GKISGAVGTYANIDPFVEQYVCEKLGLKAAPISTQTLQRDRHADYMATLALIATSIEKFA 237

Query: 241 TEIRHLQRTEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSHVIPAMENVAL 300
            EIR LQ++E  EVEEFF  GQKGSS+MPHKRNPI +EN+TG++R+IR +++ A ENV L
Sbjct: 238 VEIRGLQKSETREVEEFFAKGQKGSSAMPHKRNPIGSENMTGMARVIRGYMMTAYENVPL 297

Query: 301 WHERDISHSSVERVIGPDATIHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRI 360
           WHERDISHSS ER+I PDATI L++ LNR  N+++ L V+PENMK N+++  GLI+SQR+
Sbjct: 298 WHERDISHSSAERIILPDATIALNYMLNRFSNIVKNLTVFPENMKRNMDRTLGLIYSQRV 357

Query: 361 LLALTQAGVSREEAYQLVQRNAMKVWKNGAIFLDVLLADVDIRKVLSEKEICDKFDYKYH 420
           LLAL   G++REEAY  VQ  AM+ W+    F +++ A+  I   LS ++I D FDY YH
Sbjct: 358 LLALIDTGLTREEAYDTVQPKAMEAWEKQVPFRELVEAEEKITSRLSPEKIADCFDYNYH 417

Query: 421 TKHVNAIFERV 431
            K+V+ IFER+
Sbjct: 418 LKNVDLIFERL 428


>gi|146387382|pdb|2PFM|A Chain A, Crystal Structure Of Adenylosuccinate Lyase (Purb) From Bacillus Anthracis Length = 444 Back     alignment and structure
gi|290789885|pdb|2X75|A Chain A, Staphylococcus Aureus Adenylosuccinate Lyase Length = 431 Back     alignment and structure
gi|7245290|pdb|1C3U|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 431 Back     alignment and structure
>gi|7245816|pdb|1C3C|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 429 Back     alignment and structure
>gi|169791879|pdb|3C8T|A Chain A, Crystal Structure Of Fumarate Lyase From Mesorhizobium Sp. Bnc1 Length = 451 Back     alignment and structure
>gi|159795583|pdb|2VD6|A Chain A, Human Adenylosuccinate Lyase In Complex With Its Substrate N6-(1,2-Dicarboxyethyl)-Amp, And Its Products Amp And Fumarate. Length = 503 Back     alignment and structure
>gi|119390451|pdb|2J91|A Chain A, Crystal Structure Of Human Adenylosuccinate Lyase In Complex With Amp Length = 503 Back     alignment and structure
>gi|34810579|pdb|1Q5N|A Chain A, Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate Cycloisomerase (Cmle) From Acinetobacter Calcoaceticus Sp. Adp1 Length = 454 Back     alignment and structure
>gi|49258707|pdb|1RE5|A Chain A, Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lactonizing Enzyme From Pseudomonas Putida Length = 450 Back     alignment and structure
gi|56553869|pdb|1TJ7|A Chain A, Structure Determination And Refinement At 2.44 A Resolution Of Argininosuccinate Lyase From E. Coli Length = 457 Back     alignment and structure
gi|157834857|pdb|2E9F|A Chain A, Crystal Structure Of T.Th.Hb8 Argininosuccinate Lyase Complexed With L-Arginine Length = 462 Back     alignment and structure
gi|14278423|pdb|1HY1|A Chain A, Crystal Structure Of Wild Type Duck Delta 2 Crystallin (Eye Lens Protein) Length = 468 Back     alignment and structure
>gi|82407488|pdb|1XWO|A Chain A, Crystal Structrue Of Goose Delta Crystallin Length = 465 Back     alignment and structure
>gi|157872869|pdb|1DCN|A Chain A, Inactive Mutant H162n Of Delta 2 Crystallin With Bound Argininosuccinate Length = 447 Back     alignment and structure
>gi|55669957|pdb|1TJV|A Chain A, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant Length = 474 Back     alignment and structure
>gi|55669953|pdb|1TJU|A Chain A, Crystal Structure Of T161s Duck Delta 2 Crystallin Mutant Length = 474 Back     alignment and structure
>gi|256599714|pdb|3GZH|A Chain A, Crystal Structure Of Phosphate-Bound Adenylosuccinate Lyase From E. Coli Length = 482 Back     alignment and structure
>gi|20150709|pdb|1K7W|A Chain A, Crystal Structure Of S283a Duck Delta 2 Crystallin Mutant Length = 468 Back     alignment and structure
>gi|55670107|pdb|1U15|A Chain A, Crystal Structure Of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) Length = 472 Back     alignment and structure
>gi|13096685|pdb|1DOF|A Chain A, The Crystal Structure Of Adenylosuccinate Lyase From Pyrobaculum Aerophilum: Insights Into Thermal Stability And Human Pathology Length = 403 Back     alignment and structure
>gi|2914651|pdb|1AOS|A Chain A, Human Argininosuccinate Lyase Length = 464 Back     alignment and structure
>gi|2981709|pdb|1AUW|A Chain A, H91n Delta 2 Crystallin From Duck Length = 468 Back     alignment and structure
>gi|18655512|pdb|1K62|A Chain A, Crystal Structure Of The Human Argininosuccinate Lyase Q286r Mutant Length = 464 Back     alignment and structure
>gi|151567888|pdb|2PTQ|A Chain A, Crystal Structure Of Escherichia Coli Adenylosuccinate Lyase Mutant H171n With Bound Amp And Fumarate Length = 462 Back     alignment and structure
>gi|151567890|pdb|2PTR|A Chain A, Crystal Structure Of Escherichia Coli Adenylosuccinate Lyase Mutant H171a With Bound Adenylosuccinate Substrate Length = 462 Back     alignment and structure
>gi|60594392|pdb|1YIS|A Chain A, Structural Genomics Of Caenorhabditis Elegans: Adenylosuccinate Lyase Length = 478 Back     alignment and structure
>gi|14278421|pdb|1HY0|A Chain A, Crystal Structure Of Wild Type Duck Delta 1 Crystallin (Eye Lens Protein) Length = 466 Back     alignment and structure
>gi|151567892|pdb|2PTS|A Chain A, Crystal Structure Of Wild Type Escherichia Coli Adenylosuccinate Lyase Length = 462 Back     alignment and structure
>gi|157835920|pdb|2QGA|B Chain B, Plasmodium Vivax Adenylosuccinate Lyase Pv003765 With Amp Bound Length = 465 Back     alignment and structure
>gi|196049942|pdb|3E04|A Chain A, Crystal Structure Of Human Fumarate Hydratase Length = 490 Back     alignment and structure
>gi|23200276|pdb|1KQ7|A Chain A, E315q Mutant Form Of Fumarase C From E.Coli Length = 467 Back     alignment and structure
>gi|114794583|pdb|2HVG|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From Plasmodium Vivax Length = 482 Back     alignment and structure
>gi|2392682|pdb|2FUS|A Chain A, Mutations Of Fumarase That Distinguish Between The Active Site And A Nearby Dicarboxylic Acid Binding Site Length = 467 Back     alignment and structure
gi|1942160|pdb|1FUO|A Chain A, Fumarase C With Bound Citrate Length = 467 Back     alignment and structure
>gi|2392342|pdb|1FUR|A Chain A, Fumarase Mutant H188n With Bound Substrate L-Malate At Putative Activator Site Length = 467 Back     alignment and structure
>gi|48425891|pdb|1VDK|A Chain A, Crystal Structure Of Fumarase From Thermus Thermophilus Hb8 Length = 466 Back     alignment and structure
gi|14278427|pdb|1I0A|A Chain A, Crystal Structure Of Wild Type Turkey Delta 1 Crystallin (Eye Lens Protein) Length = 466 Back     alignment and structure
>gi|1942162|pdb|1FUP|A Chain A, Fumarase With Bound Pyromellitic Acid Length = 472 Back     alignment and structure
>gi|157834306|pdb|1YFM|A Chain A, Recombinant Yeast Fumarase Length = 488 Back     alignment and structure
>gi|30749354|pdb|1J3U|A Chain A, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1 Length = 468 Back     alignment and structure
gi|2392396|pdb|1JSW|A Chain A, Native L-Aspartate Ammonia Lyase Length = 478 Back     alignment and structure
>gi|161761247|pdb|3BHG|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From Legionella Pneumophila Length = 459 Back     alignment and structure
>gi|254221004|pdb|3GTD|A Chain A, 2.4 Angstrom Crystal Structure Of Fumarate Hydratase From Rickettsia Prowazekii Length = 482 Back     alignment and structure
>gi|303325218|pdb|3OCF|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From Brucella Melitensis In Native Form Length = 478 Back     alignment and structure
>gi|303325214|pdb|3OCE|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From Brucella Melitensis Bound To Cobalt Length = 474 Back     alignment and structure
>gi|320089966|pdb|3QBP|A Chain A, Crystal Structure Of Fumarase Fum From Mycobacterium Marinum Length = 478 Back     alignment and structure
>gi|300508783|pdb|3NO9|A Chain A, Crystal Structure Of Apo Fumarate Hydratase From Mycobacterium Tuberculosis Length = 475 Back     alignment and structure
>gi|332639961|pdb|3RRP|A Chain A, Crystal Structure Of Fumarate Hydratase Fum From Mycobacterium Abscessus With Malate Bound Length = 471 Back     alignment and structure
>gi|118137741|pdb|2FEL|A Chain A, 3-Carboxy-Cis,Cis-Muconate Lactonizing Enzyme From Agrobacterium Radiobacter S2 Length = 359 Back     alignment and structure

Homologous Structures in PDB70 Database Detected by RPS-BLAST

IdentityAlignment graphLength Definition E-value
Target435 adenylosuccinate lyase [Candidatus Liberibacter asiatic
2pfm_A444 Adenylosuccinate lyase; PURB, purine biosynthesis; 2.00 2e-99
1c3c_A429 Protein (adenylosuccinate lyase); purine biosynthesis; 2e-88
1q5n_A454 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromat 1e-81
1yis_A478 Adenylosuccina