254781202

254781202

hypothetical protein CLIBASIA_05545

GeneID in NCBI database:8210227Locus tag:CLIBASIA_05545
Protein GI in NCBI database:254781202Protein Accession:YP_003065615.1
Gene range:-(1199145, 1201739)Protein Length:864aa
Gene description:hypothetical protein
COG prediction:none
KEGG prediction:hypothetical protein
SEED prediction:hypothetical protein
Pathway involved in KEGG:not defined
Subsystem involved in SEED:- none -
sequencesequence profile

Prediction of Local Sequence Properties

SourceSummaryResult
scaler
NCBI Databasesequence
PSIPREDsecondary structure
SSPROsecondary structure
DISEMBLcoil and loop
DISEMBLflexible loop
SEGlow complexity
DISOPREDdisordered
DISEMBLmissing residues
DISPROdisordered
TMHMMnone TM-Helix
TOPPRED3 TM-Helix
HMMTOPnone TM-Helix
MEMSATnone TM-Helix
MEMSAT_SVMnone TM-Helix
PHOBIUSnone TM-Helix
SignalP_HMMno
SignalP_NNno
COILScoiled coil
70% MSAconservation map
90% MSAconservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860----
MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELFQNMDEGLPHRLPFPFGED
ccHHHHHHHHHHHcccccHHHHHHHHHHHHHEEEEcccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHccHHHHHHHHHHHHHHHHEEccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccEEEEHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccHHHHHHHHHccccccEEEEcccHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccHHHHHHHHHHHHcccccccEEEEEEcccccccccccccEEEEEEEEEEHHHHHHHHHHHHHHHHHcccccccccEEEccccccccHHHHHHHHHHHHHcccHHHHHHHHcHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
ccHHHHHHHHHHHHccccHHHHcccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHcccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHcccccccccHHHHHHHHcHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHccccEEEccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHcccHHHHHHHHHHHHHHHcccccccccHHHHccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHcHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHHHHHccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccHccHHHHcccccccHHHHHHcccccHHHHHHHHHHHHccccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccEEEEEccccccHHHHccccHEccccccccHHHHHHHHHcccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccccc
MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDrvqagvygkSQALFNKLFFkagsaevpLEMKIKAAETKVLSKFNEYaevgsknlgftldkqfgldvfdemkgkktqNEQASRLVKQYFETQRELHSQAHeagldykffenripqpmsvdklratkkddFVRSMLdwldlsrykdidgtplsrsEIASFVGEVFAErvrstsfkdpsipssevgvkrEFERVFHFKDSQAHMDYMEhfgvstnvNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSaagasmlgqhpigalledgfiSRQMlsrvgidkEAIQRINKMPLKERMELLSDVGLYAEGVVahgrnmmegsdafQIGHKLHSKMhkwsgaeyldkkrisSHALIVYNQIgrmtdtyaslkdlkadprldpSIKAFFKQLDDTDFTVIKRakamsspdgylyartpstiknlkdadlRDLARMSDKIAYHRKklknsktlspEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTsvrgamhtslfdrqrlglltykrgtRAGEALRMFQqftttptgmflnildlsnsakmpkgasMALNHVWIQYSATMALAGIGVASIKALlrgedpslpeviydgtlangallpYMDRLTKLVSKgdraaiggllgpvpsmVTNLTSSAVELAtkdnenskVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEelnpgyldrqqskKKKKGIELFQNmdeglphrlpfpfged
mkpeciqvlnkaagrelskkelrrledGIVRAyvsldgkglskAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAevgsknlgftLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQpmsvdklratkkDDFVrsmldwldlsrykdidgtplsrSEIASFVGEVFAErvrstsfkdpsipssevgvkreFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIAndqeasagnkvlkdwlgrNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFfkqlddtdfTVIKrakamsspdgylyartpstiknlkdadlrDLARMSDKIAYHRKklknsktlspeqRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAmhtslfdrqrlglLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGgllgpvpsMVTNLTSSAVElatkdnenskvnATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELFQnmdeglphrlpfpfged
MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELFQNMDEGLPHRLPFPFGED
***ECIQ*LNKAAGR*LS*KELRRLEDGIVRAYVS**********RYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQAL************************KVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDE**************VKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKD****PLSRSEIASFVGEVFAER************************VFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTI***************************AMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQR*********MELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPG****************FQNMDEGLP**********
MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLK***************QLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELFQNMDEGLPHRLPFPFGED
*KPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELFQNMDEGLPHRLP******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxhhhhhhhhhhhhhhhhhhhhxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQxxxxxxxxxxxxxxxxxxxxxKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELFQNMDEGLPHRLPFPFGED
MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELFQNMDEGLPHRLPFPFGED
MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELFQNMDEGLPHRLPFPFGED

Close Homologs Detected by BLAST or PSI-BLAST

Homolog within the Genome Detected by BLAST

Original result of BLAST against C. L. asiaticus genome

No hits with e-value below 0.05

Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations

Original result of PSI-BLAST first 2 iterations

IdentityAlignment graphLength Definition Round E-value
Target864 hypothetical protein CLIBASIA_05545 [Candidatus Liberib
309702799825 hypothetical phage protein [Escherichia coli ETEC H1040 1 7e-38
332344341824 conserved hypothetical protein [Escherichia coli UMNK88 1 5e-36
298381705824 conserved hypothetical protein [Escherichia coli FVEC13 1 1e-35
300898440824 conserved hypothetical protein [Escherichia coli MS 198 1 1e-35
331648163824 hypothetical protein ECIG_04089 [Escherichia coli M605] 1 1e-35
304398390921 hypothetical protein PanABDRAFT_3525 [Pantoea sp. aB] L 1 4e-30
85059173824 hypothetical protein SG1195 [Sodalis glossinidius str. 1 2e-29
330007168924 hypothetical protein HMPREF9538_03599 [Klebsiella sp. M 1 9e-29
30387396918 hypothetical protein epsilon15p17 [Enterobacteria phage 1 2e-28
215487808824 hypothetical protein E2348C_2741 [Escherichia coli O127 1 2e-27
>gi|309702799|emb|CBJ02130.1| hypothetical phage protein [Escherichia coli ETEC H10407] Length = 825 Back     alignment and organism information
 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 209/874 (23%), Positives = 357/874 (40%), Gaps = 98/874 (11%)

Query: 1   MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSL------DGKGLSKAERYRLAGLKA 54
           M+ ECIQ + +AA R L+ +E++ +ED I R   SL        + L+ AER R AG  A
Sbjct: 2   MRQECIQAVQQAAKRTLTAREIQDIEDRIYRNMRSLARDDPASWRQLTDAERLRRAGQLA 61

Query: 55  EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
            ++ Q+E              R +L + ++  Q G  GK  AL   + F A   S  + +
Sbjct: 62  SDELQREAALKKRRVALTISARQRLDNFINNYQ-GADGKLGALNRTIAFSADGKSNFLSV 120

Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
           E + KA     LS+  E +  V  +  G   D+    D+  EM+G+ T N +A +  K +
Sbjct: 121 ESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVFEMRGQNTGNAKARKGAKAW 180

Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
            E    L  + ++AG D  + EN  IPQ  S++K+ A  KD +V  ++  LD   Y   D
Sbjct: 181 GEVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVTKDKWVSDVIGKLDRKYYTRSD 240

Query: 231 GTPLSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
           G  +S SE+ +F+GE +            D  +  S     R    R  HFKD+ +++ Y
Sbjct: 241 GQLMSDSELTAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQY 300

Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEA--SAGNK 345
            + +G   ++  I+   L  +SKDI +    GPN D   + ++ Q  A    A  S   K
Sbjct: 301 QQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTGK 359

Query: 346 VLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGAL 405
           V        +L    E +     +    + V N   A W   +R+   AS LG   + + 
Sbjct: 360 V-------ERLANNTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSSF 410

Query: 406 LEDG--FISRQMLSRVGIDKEAIQRINKMPLKERME--LLSDVGLYAEGVVAHGRNMMEG 461
            + G  ++S + ++ + +++    ++  M    R E  L    GL  E ++         
Sbjct: 411 SDLGTMYLSAK-VTNLPMNQLFRNQLEAMDPTNRTELALARRAGLAMESLLGSVNRWAMD 469

Query: 462 SDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDL-KADPRLD 520
           +    +     + + + SG          ++ + +   +G +      L+ L  +D R+ 
Sbjct: 470 NMGPSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRIL 529

Query: 521 PSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYH 580
            S     K + DTD++V K A+     +G     TP +I  + D+ ++ L          
Sbjct: 530 KS-----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG--------- 575

Query: 581 RKKLKNSKTLSPEQ-RQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHT 639
                      PE+ + E  ++L     +E+++       +    V   +Q         
Sbjct: 576 ----------EPERVKFEAMRKLLGAVTEEVDMAVITPGAREQMFVGSGLQ--------- 616

Query: 640 SLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHV 699
                         RGT  GE  R    F + P  + +     S +  MP     A    
Sbjct: 617 --------------RGTWKGELTRSVFLFKSFPISVVMR--HWSRAMGMPSAGGRAAYIA 660

Query: 700 WIQYSATMALAGIGVAS--IKALLRGEDPS------LPEVIYDGTLANGALLPYMDRLTK 751
               S TM    +G  S  I  L+ G +P       + +   +  L  G    Y D L  
Sbjct: 661 TFLASTTM----LGALSMQITDLINGRNPKEMTGDHMVKFWINAFLKGGGAGLYGDFLFS 716

Query: 752 LVSKGDRAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNM 807
             ++    A+  +LGPV  +V ++   A    +      NE +  +  K  +  +P  N+
Sbjct: 717 DHTRYGSGALASMLGPVAGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANL 776

Query: 808 WYLKNSFDHLILNQILEELNPGYLDRQQSKKKKK 841
           WYLK + DH+I NQ+ E  +PGYL + + + KK+
Sbjct: 777 WYLKAALDHMIFNQMQEYFSPGYLRKMEQRSKKE 810



Species: Escherichia coli
Genus: Escherichia
Family: Enterobacteriaceae
Order: Enterobacteriales
Class: Gammaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria
>gi|332344341|gb|AEE57675.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 824 Back     alignment and organism information
>gi|298381705|ref|ZP_06991304.1| conserved hypothetical protein [Escherichia coli FVEC1302] Length = 824 Back     alignment and organism information
>gi|300898440|ref|ZP_07116781.1| conserved hypothetical protein [Escherichia coli MS 198-1] Length = 824 Back     alignment and organism information
>gi|331648163|ref|ZP_08349253.1| hypothetical protein ECIG_04089 [Escherichia coli M605] Length = 824 Back     alignment and organism information
>gi|304398390|ref|ZP_07380264.1| hypothetical protein PanABDRAFT_3525 [Pantoea sp. aB] Length = 921 Back     alignment and organism information
>gi|85059173|ref|YP_454875.1| hypothetical protein SG1195 [Sodalis glossinidius str. 'morsitans'] Length = 824 Back     alignment and organism information
>gi|330007168|ref|ZP_08305910.1| hypothetical protein HMPREF9538_03599 [Klebsiella sp. MS 92-3] Length = 924 Back     alignment and organism information
>gi|30387396|ref|NP_848225.1| hypothetical protein epsilon15p17 [Enterobacteria phage epsilon15] Length = 918 Back     alignment and organism information
>gi|215487808|ref|YP_002330239.1| hypothetical protein E2348C_2741 [Escherichia coli O127:H6 str. E2348/69] Length = 824 Back     alignment and organism information

Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch

Conserved Domains in CDD Database Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Original result of RPS-BLASTagainst CDD database part II

IdentityAlignment graphLength Definition E-value
Target864 hypothetical protein CLIBASIA_05545 [Candidatus Liberib
PHA01972828 PHA01972, PHA01972, structural protein 1e-54
>gnl|CDD|177329 PHA01972, PHA01972, structural protein Back     alignment and domain information

Conserved Domains in CDD Database Detected by HHsearch

Original result of HHsearch against CDD database

IdentityAlignment graphLength Definition Probability
Target 864 hypothetical protein CLIBASIA_05545 [Candidatus Liberib
PHA01972828 structural protein 100.0
PHA003681316 internal virion protein D 98.01
PHA020061337 virion protein 97.92
>PHA01972 structural protein Back     alignment and domain information
>PHA00368 internal virion protein D Back     alignment and domain information
>PHA02006 virion protein Back     alignment and domain information

Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch

Homologous Structures Detected by PSI-BLAST against Nonredundant Database

Original result of PSI-BLAST

No homologous structure with e-value below 0.005

Homologous Structures in PDB70 Database Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Homologous Structures in PDB70 Database Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 90.00

Homologous Domains in SCOP and MMDB Database
Detected by RPS-BLAST and HHsearch

Homologous Domains in SCOP70 (Version1.75) Database Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains in SCOP70 (Version 1.75) Database Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 90.00

Homologous Domains in MMDB70 Database Detected by RPS-BLAST

Original result of RPS-BLAST against MMDB70 database

No hit with e-value below 0.005

Homologous Domains in MMDB70 Database Detected by HHsearch

Original result of HHsearch against MMDB70 database

No hit with probability higher than 90.00