peg_1079

 Score =  473 bits (1217), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 219/251 (87%), Positives = 233/251 (92%)

Query: 1   LKAYEQGRDKWQSNTVHYVWFDEEPPEDVYFEGLTRINATQGLVTLTLTPLKGRSPIIEH 60
           LKAYEQGR+KWQSNTV YVWFDEEPPEDVYFEGLTRINATQGLV LTLTPLKGRS I+EH
Sbjct: 147 LKAYEQGREKWQSNTVDYVWFDEEPPEDVYFEGLTRINATQGLVALTLTPLKGRSNIVEH 206

Query: 61  YLSASSSDRQVIRMTINETPHYNEQERKRIIDSYPLHEREARTKGEPILGSGRIFPIVEE 120
           YLS+SS DRQVIRMT+ ETPHY  +ER RII+SYPLHEREARTKGEP+LGSGRIFPI+E+
Sbjct: 207 YLSSSSPDRQVIRMTLEETPHYTAKERIRIINSYPLHEREARTKGEPVLGSGRIFPILEQ 266

Query: 121 DIVINSLDIPEHWVQIGGMDFGWHHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAA 180
           DIVI S DIPEHW QIGGMDFGWHHPFAA  L WNRDSDVIYVVKNYRCREQTP+FH A 
Sbjct: 267 DIVITSFDIPEHWSQIGGMDFGWHHPFAAVQLAWNRDSDVIYVVKNYRCREQTPLFHAAV 326

Query: 181 LKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDML 240
           LKSWGKWLPWAWPHDGLQHDK SGEQL+ QYR+QGMKMLPECATFDDGSNGVEAG+SD+L
Sbjct: 327 LKSWGKWLPWAWPHDGLQHDKGSGEQLAVQYRQQGMKMLPECATFDDGSNGVEAGVSDIL 386

Query: 241 DRMRSGRWKVF 251
           DRMRSGRWKVF
Sbjct: 387 DRMRSGRWKVF 397

Species: Candidatus Liberibacter solanacearum
Genus: Candidatus Liberibacter
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  384 bits (987), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 176/251 (70%), Positives = 201/251 (80%)

Query: 1   LKAYEQGRDKWQSNTVHYVWFDEEPPEDVYFEGLTRINATQGLVTLTLTPLKGRSPIIEH 60
            KAYEQGR KWQ+NTV YVWFDEEPPEDVYFEG+TR NAT+G + +T TPLKG S ++  
Sbjct: 169 FKAYEQGRAKWQANTVDYVWFDEEPPEDVYFEGITRTNATRGSIAVTFTPLKGLSAVVAR 228

Query: 61  YLSASSSDRQVIRMTINETPHYNEQERKRIIDSYPLHEREARTKGEPILGSGRIFPIVEE 120
           YL   S+DR+V  MTI +  HY  +ER+RIIDSYP HEREARTKG P LGSGRIFP+ EE
Sbjct: 229 YLMEKSADREVTTMTIEDAEHYTPEERRRIIDSYPAHEREARTKGVPALGSGRIFPVTEE 288

Query: 121 DIVINSLDIPEHWVQIGGMDFGWHHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAA 180
            I  +  DIP+HWVQIGG+DFGW HPFAA    W+RD+DV YV K YR RE TPI H AA
Sbjct: 289 SIRADPFDIPKHWVQIGGLDFGWDHPFAAVGCAWDRDADVFYVTKLYRERESTPIIHAAA 348

Query: 181 LKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDML 240
           LK WG  LPWAWPHDGLQHDK SGEQL+AQYR QG+ +LPE ATFDDG+NGVEAG+SDML
Sbjct: 349 LKPWGGTLPWAWPHDGLQHDKGSGEQLAAQYRAQGLALLPERATFDDGTNGVEAGLSDML 408

Query: 241 DRMRSGRWKVF 251
            RM++GRWKVF
Sbjct: 409 QRMQTGRWKVF 419

Species: Sinorhizobium medicae
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 174/251 (69%), Positives = 201/251 (80%)

Query: 1   LKAYEQGRDKWQSNTVHYVWFDEEPPEDVYFEGLTRINATQGLVTLTLTPLKGRSPIIEH 60
            KAYEQGR KWQ+NTV YVWFDEEPPEDVYFEG+TR NAT+G + +T TPLKG S ++  
Sbjct: 108 FKAYEQGRGKWQANTVDYVWFDEEPPEDVYFEGITRTNATRGSIAVTFTPLKGMSTVVAR 167

Query: 61  YLSASSSDRQVIRMTINETPHYNEQERKRIIDSYPLHEREARTKGEPILGSGRIFPIVEE 120
           Y+   S DR+VI MTI++  HY  +ER+RIIDSYP HEREARTKG P LGSGRIFP+ EE
Sbjct: 168 YILEKSPDREVITMTIDDAEHYTPEERQRIIDSYPAHEREARTKGVPSLGSGRIFPVAEE 227

Query: 121 DIVINSLDIPEHWVQIGGMDFGWHHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAA 180
            I I   +IP+HWVQIGG+DFGW HPF A    W+RD+DV YV K YR RE TPI H AA
Sbjct: 228 SITIAPFEIPKHWVQIGGLDFGWDHPFGAAGCAWDRDADVFYVTKVYREREATPIIHAAA 287

Query: 181 LKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDML 240
           LK WG WLPW+WPHDGLQHDK SGEQL+ QYR QG+ MLPE ATF+DG+NGVEAG+SDML
Sbjct: 288 LKPWGAWLPWSWPHDGLQHDKGSGEQLATQYRAQGLNMLPERATFEDGTNGVEAGLSDML 347

Query: 241 DRMRSGRWKVF 251
            RM++GRWKVF
Sbjct: 348 QRMQTGRWKVF 358

Species: Sinorhizobium fredii
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  381 bits (979), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 174/251 (69%), Positives = 201/251 (80%)

Query: 1   LKAYEQGRDKWQSNTVHYVWFDEEPPEDVYFEGLTRINATQGLVTLTLTPLKGRSPIIEH 60
            KAYEQGR KWQ+NTV YVWFDEEPPEDVYFEG+TR NAT+G + +T TPL+G S ++  
Sbjct: 169 FKAYEQGRAKWQANTVDYVWFDEEPPEDVYFEGITRTNATRGAIAVTFTPLRGLSAVVAR 228

Query: 61  YLSASSSDRQVIRMTINETPHYNEQERKRIIDSYPLHEREARTKGEPILGSGRIFPIVEE 120
           YL   S DR VI MTI +  HY  QER+R+IDSYP HEREART+G P LGSGRIFP+ EE
Sbjct: 229 YLMEKSPDRAVITMTIEDAEHYTPQERQRVIDSYPAHEREARTRGVPALGSGRIFPVTEE 288

Query: 121 DIVINSLDIPEHWVQIGGMDFGWHHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAA 180
            I I+  +IP+HWVQIGG+DFGW HPFAA    W+RD+DV +V K YR RE TPI H AA
Sbjct: 289 SIRIDPFEIPKHWVQIGGLDFGWDHPFAAVGCAWDRDADVFHVTKIYREREATPIIHAAA 348

Query: 181 LKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDML 240
           LK WG  +PWAWPHDGLQHDK SGEQL+AQYR QG+ +LPE ATFDDG+NGVEAG+SDML
Sbjct: 349 LKPWGAAMPWAWPHDGLQHDKGSGEQLAAQYRAQGLALLPERATFDDGTNGVEAGLSDML 408

Query: 241 DRMRSGRWKVF 251
            RM+SGRWKVF
Sbjct: 409 QRMQSGRWKVF 419

Species: Sinorhizobium meliloti
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  381 bits (979), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 174/251 (69%), Positives = 201/251 (80%)

Query: 1   LKAYEQGRDKWQSNTVHYVWFDEEPPEDVYFEGLTRINATQGLVTLTLTPLKGRSPIIEH 60
            KAYEQGR KWQ+NTV YVWFDEEPPEDVYFEG+TR NAT+G + +T TPL+G S ++  
Sbjct: 169 FKAYEQGRAKWQANTVDYVWFDEEPPEDVYFEGITRTNATRGAIAVTFTPLRGLSAVVAR 228

Query: 61  YLSASSSDRQVIRMTINETPHYNEQERKRIIDSYPLHEREARTKGEPILGSGRIFPIVEE 120
           YL   S DR VI MTI +  HY  QER+R+IDSYP HEREART+G P LGSGRIFP+ EE
Sbjct: 229 YLMEKSPDRAVITMTIEDAEHYTPQERQRVIDSYPAHEREARTRGVPALGSGRIFPVTEE 288

Query: 121 DIVINSLDIPEHWVQIGGMDFGWHHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAA 180
            I I+  +IP+HWVQIGG+DFGW HPFAA    W+RD+DV +V K YR RE TPI H AA
Sbjct: 289 SIRIDPFEIPKHWVQIGGLDFGWDHPFAAVGCAWDRDADVFHVTKIYREREATPIIHAAA 348

Query: 181 LKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDML 240
           LK WG  +PWAWPHDGLQHDK SGEQL+AQYR QG+ +LPE ATFDDG+NGVEAG+SDML
Sbjct: 349 LKPWGAAMPWAWPHDGLQHDKGSGEQLAAQYRAQGLALLPERATFDDGTNGVEAGLSDML 408

Query: 241 DRMRSGRWKVF 251
            RM+SGRWKVF
Sbjct: 409 QRMQSGRWKVF 419

Species: Sinorhizobium meliloti
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  381 bits (979), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 174/251 (69%), Positives = 201/251 (80%)

Query: 1   LKAYEQGRDKWQSNTVHYVWFDEEPPEDVYFEGLTRINATQGLVTLTLTPLKGRSPIIEH 60
            KAYEQGR KWQ+NTV YVWFDEEPPEDVYFEG+TR NAT+G + +T TPL+G S ++  
Sbjct: 169 FKAYEQGRAKWQANTVDYVWFDEEPPEDVYFEGITRTNATRGAIAVTFTPLRGLSAVVAR 228

Query: 61  YLSASSSDRQVIRMTINETPHYNEQERKRIIDSYPLHEREARTKGEPILGSGRIFPIVEE 120
           YL   S DR VI MTI +  HY  QER+R+IDSYP HEREART+G P LGSGRIFP+ EE
Sbjct: 229 YLMEKSPDRAVITMTIEDAEHYTPQERQRVIDSYPAHEREARTRGVPALGSGRIFPVTEE 288

Query: 121 DIVINSLDIPEHWVQIGGMDFGWHHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAA 180
            I I+  +IP+HWVQIGG+DFGW HPFAA    W+RD+DV +V K YR RE TPI H AA
Sbjct: 289 SIRIDPFEIPKHWVQIGGLDFGWDHPFAAVGCAWDRDADVFHVTKIYREREATPIIHAAA 348

Query: 181 LKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDML 240
           LK WG  +PWAWPHDGLQHDK SGEQL+AQYR QG+ +LPE ATFDDG+NGVEAG+SDML
Sbjct: 349 LKPWGAAMPWAWPHDGLQHDKGSGEQLAAQYRAQGLALLPERATFDDGTNGVEAGLSDML 408

Query: 241 DRMRSGRWKVF 251
            RM+SGRWKVF
Sbjct: 409 QRMQSGRWKVF 419

Species: Sinorhizobium meliloti
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 174/251 (69%), Positives = 201/251 (80%)

Query: 1   LKAYEQGRDKWQSNTVHYVWFDEEPPEDVYFEGLTRINATQGLVTLTLTPLKGRSPIIEH 60
            KAYEQGR KWQ+NTV YVWFDEEPPEDVYFEG+TR NAT+G + +T TPLKG S ++  
Sbjct: 146 FKAYEQGRGKWQANTVDYVWFDEEPPEDVYFEGITRTNATRGAIAVTFTPLKGLSNVVAR 205

Query: 61  YLSASSSDRQVIRMTINETPHYNEQERKRIIDSYPLHEREARTKGEPILGSGRIFPIVEE 120
           YL   S DR+VI MTI +  HY  +ER+RII+SYP HEREARTKG P LGSGRIFP+ EE
Sbjct: 206 YLMEKSPDREVITMTIEDAEHYTPEERQRIIESYPAHEREARTKGVPALGSGRIFPVTEE 265

Query: 121 DIVINSLDIPEHWVQIGGMDFGWHHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAA 180
            I +   DIP+HWVQIGG+DFGW HPFAA    W+RD+DV YV + YR RE TPI H AA
Sbjct: 266 AIRVEPFDIPKHWVQIGGLDFGWDHPFAAVGCAWDRDADVFYVTRIYREREATPIIHAAA 325

Query: 181 LKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDML 240
           LK WG WLP+AWPHDGLQHDK SGEQL+AQYR QG+ +L E ATFDDG+NGVEAG+SDML
Sbjct: 326 LKPWGAWLPFAWPHDGLQHDKGSGEQLAAQYRAQGLPLLAERATFDDGTNGVEAGLSDML 385

Query: 241 DRMRSGRWKVF 251
            RM++GRWKVF
Sbjct: 386 QRMQTGRWKVF 396

Species: Sinorhizobium fredii
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  342 bits (876), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 153/251 (60%), Positives = 197/251 (78%)

Query: 1   LKAYEQGRDKWQSNTVHYVWFDEEPPEDVYFEGLTRINATQGLVTLTLTPLKGRSPIIEH 60
           LK+++QGR+KWQ++TVH+VWFDEEPPEDVYFEG+TR N T G V +T TPLKG S ++  
Sbjct: 164 LKSFDQGREKWQADTVHWVWFDEEPPEDVYFEGITRTNRTFGPVFMTFTPLKGMSNVVRR 223

Query: 61  YLSASSSDRQVIRMTINETPHYNEQERKRIIDSYPLHEREARTKGEPILGSGRIFPIVEE 120
           +L+  ++DR  ++M+I +  HY+ +E  RI  SYP HER+ART+G P LGSGR+FPI +E
Sbjct: 224 FLTEDAADRGYVQMSIEDAEHYSAEECARITASYPPHERDARTQGVPALGSGRVFPIAQE 283

Query: 121 DIVINSLDIPEHWVQIGGMDFGWHHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAA 180
           +I +    IP  W  IGGMDFG+ HPFAA  L W+RD+D++YVV  YR RE TPI H AA
Sbjct: 284 EISVAPFAIPAQWALIGGMDFGYDHPFAAVKLAWDRDADILYVVCAYRKRESTPIIHAAA 343

Query: 181 LKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDML 240
           LK WG  LPWAWPHDGLQHDK SG+QL+ QYR+QG+ MLP+ ATF+DG+NG+EAG+++ML
Sbjct: 344 LKPWGVTLPWAWPHDGLQHDKGSGDQLAEQYRQQGLAMLPQRATFEDGTNGLEAGVTEML 403

Query: 241 DRMRSGRWKVF 251
           DRM +GR KVF
Sbjct: 404 DRMHTGRLKVF 414

Species: Xylella fastidiosa
Genus: Xylella
Family: Xanthomonadaceae
Order: Xanthomonadales
Class: Gammaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  341 bits (874), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 155/251 (61%), Positives = 196/251 (78%)

Query: 1   LKAYEQGRDKWQSNTVHYVWFDEEPPEDVYFEGLTRINATQGLVTLTLTPLKGRSPIIEH 60
           LK+++QGR+KWQ++TV +VWFDEEPPEDVYFEG+TR N T G V +T TPLKG S ++  
Sbjct: 163 LKSFDQGREKWQADTVDWVWFDEEPPEDVYFEGITRTNRTFGPVFMTFTPLKGMSSVVRR 222

Query: 61  YLSASSSDRQVIRMTINETPHYNEQERKRIIDSYPLHEREARTKGEPILGSGRIFPIVEE 120
           +L   + DR +++MTI++  HY+ ++R RII SYP HEREARTKG P LGSGR+FPI E+
Sbjct: 223 FLLEQAPDRGLVQMTIDDAEHYSPEDRARIIASYPAHEREARTKGTPSLGSGRVFPIAED 282

Query: 121 DIVINSLDIPEHWVQIGGMDFGWHHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAA 180
            I I    IPE W  IGGMDFG+ HPFAA  + W+R++DVIYV+  YR RE TP+ H AA
Sbjct: 283 SIAIAPFSIPEEWALIGGMDFGYDHPFAAVKMAWDREADVIYVMCAYRQREATPVIHTAA 342

Query: 181 LKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDML 240
           L+ WG  LPWAWPHDGLQHDK SGEQL+ QYR+QG+ ML + ATF DG+NG+EAG+++ML
Sbjct: 343 LRPWGAHLPWAWPHDGLQHDKGSGEQLAEQYRQQGLSMLGQRATFTDGTNGLEAGVTEML 402

Query: 241 DRMRSGRWKVF 251
           DRM +GR KVF
Sbjct: 403 DRMHTGRLKVF 413

Species: Xylella fastidiosa
Genus: Xylella
Family: Xanthomonadaceae
Order: Xanthomonadales
Class: Gammaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  341 bits (874), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 155/251 (61%), Positives = 196/251 (78%)

Query: 1   LKAYEQGRDKWQSNTVHYVWFDEEPPEDVYFEGLTRINATQGLVTLTLTPLKGRSPIIEH 60
           LK+++QGR+KWQ++TV +VWFDEEPPEDVYFEG+TR N T G V +T TPLKG S ++  
Sbjct: 162 LKSFDQGREKWQADTVDWVWFDEEPPEDVYFEGITRTNRTFGPVFMTFTPLKGMSSVVRR 221

Query: 61  YLSASSSDRQVIRMTINETPHYNEQERKRIIDSYPLHEREARTKGEPILGSGRIFPIVEE 120
           +L   + DR +++MTI++  HY+ ++R RII SYP HEREARTKG P LGSGR+FPI E+
Sbjct: 222 FLLEQAPDRGLVQMTIDDAEHYSPEDRARIIASYPAHEREARTKGTPSLGSGRVFPIAED 281

Query: 121 DIVINSLDIPEHWVQIGGMDFGWHHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAA 180
            I I    IPE W  IGGMDFG+ HPFAA  + W+R++DVIYV+  YR RE TP+ H AA
Sbjct: 282 SIAIAPFSIPEEWALIGGMDFGYDHPFAAVKMAWDREADVIYVMCAYRQREATPVIHTAA 341

Query: 181 LKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDML 240
           L+ WG  LPWAWPHDGLQHDK SGEQL+ QYR+QG+ ML + ATF DG+NG+EAG+++ML
Sbjct: 342 LRPWGAHLPWAWPHDGLQHDKGSGEQLAEQYRQQGLSMLGQRATFTDGTNGLEAGVTEML 401

Query: 241 DRMRSGRWKVF 251
           DRM +GR KVF
Sbjct: 402 DRMHTGRLKVF 412

Species: Xylella phage Xfas53
Genus: 
Family: Podoviridae
Order: Caudovirales
Class: 
Phylum: 
Superkingdom: Viruses

 Score = 97.5 bits (242), Expect = 3e-21
 Identities = 42/72 (58%), Positives = 56/72 (77%)

Query: 1  LKAYEQGRDKWQSNTVHYVWFDEEPPEDVYFEGLTRINATQGLVTLTLTPLKGRSPIIEH 60
           K++EQGR+KWQ+ TV YVWFDE+PPEDVYFEG+TR N T G+  +T TPLKG S ++  
Sbjct: 7  FKSFEQGREKWQARTVDYVWFDEQPPEDVYFEGITRTNRTSGITIVTFTPLKGMSRVVAR 66

Query: 61 YLSASSSDRQVI 72
          +L+A++ DR V 
Sbjct: 67 FLAANTPDRAVS 78

Length = 79

 Score =  116 bits (293), Expect = 5e-27
 Identities = 51/259 (19%), Positives = 91/259 (35%), Gaps = 21/259 (8%)

Query: 7   GRDKWQSNTVHYVWFDE--EPPEDVYFEGLTRINATQG-----LVTLTLTPLKGRSPIIE 59
               ++  ++  ++FDE    P+    E + R+ AT+G       +   +P         
Sbjct: 86  TAQGYRGASIAGIYFDEATWLPKFQESELVRRLRATKGKWRKTFFSTPPSPGHWVYDFWT 145

Query: 60  HYL---SASSSDRQVIRMTINETPHYNEQERKRIIDSYPLHEREARTKGEPILGSGRIFP 116
            +L      +     + +TI +      + ++ +   Y   E      GE +  SG IF 
Sbjct: 146 GWLDDKGKRTFIPADVEVTIEDARALGPEYKEELRALYSDEEFARLLMGEWVDTSGSIFK 205

Query: 117 IVE-EDIVINSLDIPEHWVQIGGMDFG--WHHPFAAGHLVWNRDSDVIYVVKNYRCREQT 173
             E E   ++    PEH   IGG+D        +AA  ++   D D  YV+     R  +
Sbjct: 206 RFELERCDVDEERPPEHREVIGGVDPAASRGGDYAALVVIAEVDGDKFYVLAREHERGLS 265

Query: 174 PIFHVAALKSWGK-WLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGV 232
           P    A +K   + +       D     +   + L  +       + P          G 
Sbjct: 266 PAEQAAIIKKLAERYNVIYIYIDDTGGGESVAQLLRRELPGAAFTVRPA-------PKGK 318

Query: 233 EAGISDMLDRMRSGRWKVF 251
            A +  + D + SGR KV 
Sbjct: 319 NARVLKVSDLIESGRLKVP 337

This family represents a group of terminase proteins. Length = 380

Probab=100.00  E-value=2.4e-42  Score=248.03  Aligned_cols=239  Identities=13%  Similarity=0.086  Sum_probs=188.5

Q ss_pred             CCCCCCCHHHHCCCC-CCEEEEECC--CCHHHHHHHHHHHCC--CCCEEEEEECCCCCCCHHHHHHCCCC----CCCEEE
Q ss_conf             974336965503331-358998189--897499886311247--58739999248999875655640367----997599
Q 537021.9.peg.1    1 LKAYEQGRDKWQSNT-VHYVWFDEE--PPEDVYFEGLTRINA--TQGLVTLTLTPLKGRSPIIEHYLSAS----SSDRQV   71 (251)
Q Consensus         1 f~~~~q~~~~~~G~~-~~~i~~DE~--~~~~~~~~~~~r~~~--~~g~i~~~~nP~~~~~~~~~~~~~~~----~~~~~~   71 (251)
T Consensus        85 f~G~d-~~~~iks~~~i~~~~~eEa~~~~~~~~~~l~~~~r~~~~~~~i~~~~NP~~~~~w~~~~~~~~~~~~~~~~~~~  163 (387)
T pfam04466        85 FYGMD-DPAKIKSIKDVSDAWIEEAAEFKTEDFDQLIPTIRRPKPGSEIFMSFNPVNKLNWTYKRFFKNDKSELDDDTYI  163 (387)
T ss_pred             EEECC-CHHHHHCCCCCEEEEEECHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCEEE
T ss_conf             98578-96884163661499994124479989999998853178871999982899987748899741775467788599


Q ss_pred             EEEEHHHCCCCCHHHHHHHHHC--CCHHHHHHHHCCCCEEECCCEEECCCCEEECCCCCCCCCCEEEEEECCCC-CCCCE
Q ss_conf             9977133466889999999870--89735643300510010143000012034315654656743575200377-48719
Q 537021.9.peg.1   72 IRMTINETPHYNEQERKRIIDS--YPLHEREARTKGEPILGSGRIFPIVEEDIVINSLDIPEHWVQIGGMDFGW-HHPFA  148 (251)
Q Consensus        72 ~~~t~~DNp~l~~~~~~~~~~~--~~~~~~~~~~~G~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~g~D~G~-~~p~a  148 (251)
T Consensus       164 ~~~ty~DNp~L~~~~i~~~e~~k~~dp~~y~~~~lGe~~~~~g~V~~~~~~~~~~~~~~~~~~~~~~~G~D~G~~~dpta  243 (387)
T pfam04466       164 HHSTYRDNPFLPEVDIREIEELKRRNPDYYRIEYLGEFGGLGTLVLPNFEIKPLWVEAAEDAHIKLGFKRDFGFDESATA  243 (387)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCEEEECCEEEECCCCCHHHHHCCCCCCEECCCCCCCCE
T ss_conf             99996169989999999999987039999899775715634877973544555232640220003342135464378877


Q ss_pred             EEEEEEECCCCEEEEEEEHHHC--CCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCHHHHHHHCCCEEEECCCCCC
Q ss_conf             9999997739989999431025--99879999999833248708972630011178888889999978974776577777
Q 537021.9.peg.1  149 AGHLVWNRDSDVIYVVKNYRCR--EQTPIFHVAALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFD  226 (251)
Q Consensus       149 ~~~~~~~~~~~~~~i~de~~~~--~~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~r~~G~~~~~~~~~~~  226 (251)
T Consensus       244 ~v~~~~~~~~~~lyi~~e~y~~~~~~~~~~~~~~~~~~~~~~~~------i~~dsa~p~~i~~~~~~~~~~~~~----~~  313 (387)
T pfam04466       244 SVRGALDVKKKVIYLYDEYYDPANQAIDDRTAEVLRDKNYTKEA------IKADSAEAKSIAALKSPGIFKIVG----AK  313 (387)
T ss_pred             EEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCE------EECCCCCCCHHHHHHHHCCHHHHC----CC
T ss_conf             99999977998999999998467876608999998863766650------223676852567998715434412----30


Q ss_pred             CCCCCHHHHHHHHHH---HHCCCCCEE
Q ss_conf             677758998999999---860799078
Q 537021.9.peg.1  227 DGSNGVEAGISDMLD---RMRSGRWKV  250 (251)
Q Consensus       227 kg~~sV~~GI~~l~~---~~~~grl~V  250 (251)
T Consensus       314 k~~~sv~~gi~~l~~~~~i~~~~~~~~  340 (387)
T pfam04466       314 KGPGSVLQKTRFLDTFRAVLIGEYLDP  340 (387)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCEE
T ss_conf             489727888889999999960576200

Initiation of packaging of double-stranded viral DNA involves the specific interaction of the prohead with viral DNA in a process mediated by a phage-encoded terminase protein. The terminase enzymes are usually hetero-oligomers composed of a small and a large subunit. This region is found on the large subunit and possess an endonuclease and ATPase activity that require Mg2+ and a neutral or slightly basic reaction. This region is also found in bacterial sequences.

Probab=100.00  E-value=3.7e-34  Score=203.81  Aligned_cols=245  Identities=22%  Similarity=0.225  Sum_probs=190.0

Q ss_pred             CCCCC--CCHHHHCCCCCCEEEEECC--CCHHHHHHHHHHHCCC--CCEEEEEECCCCCCCHHHHHHCCCCCC------C
Q ss_conf             97433--6965503331358998189--8974998863112475--873999924899987565564036799------7
Q 537021.9.peg.1    1 LKAYE--QGRDKWQSNTVHYVWFDEE--PPEDVYFEGLTRINAT--QGLVTLTLTPLKGRSPIIEHYLSASSS------D   68 (251)
Q Consensus         1 f~~~~--q~~~~~~G~~~~~i~~DE~--~~~~~~~~~~~r~~~~--~g~i~~~~nP~~~~~~~~~~~~~~~~~------~   68 (251)
T Consensus        78 ~~~~~~~~~~~~~rG~~~~~i~~DE~a~~~~~~~~~~~~~~~~~~~~~~~~~~stp~~~~~~~~~~~~~~~~~~~~~~~~  157 (380)
T pfam03237        78 FLGLESETTAQGYRGASIAGIYFDEATWLPKFQESELVRRLRATKGKWRKTFFSTPPSPGHWVYDFWTGWLDDKGKRTFI  157 (380)
T ss_pred             EEECCCCCCHHHCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCEE
T ss_conf             96257766431034854554998304536627899998644104799757999889899851989985540167775202


Q ss_pred             EEEEEEEHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCEEECCCEEECCCC-EEECCCCCCCCCCEEEEEECCCCC--C
Q ss_conf             5999977133466889999999870897356433005100101430000120-343156546567435752003774--8
Q 537021.9.peg.1   69 RQVIRMTINETPHYNEQERKRIIDSYPLHEREARTKGEPILGSGRIFPIVEE-DIVINSLDIPEHWVQIGGMDFGWH--H  145 (251)
Q Consensus        69 ~~~~~~t~~DNp~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~g~v~~~~~~-~~~~~~~~~~~~~~~~~g~D~G~~--~  145 (251)
T Consensus       158 ~~~~~~t~~d~~~~~~~~~e~l~~~~~~~~~~qe~~g~f~~~~g~if~~~~~~~~~~~~~~~p~~~~~~~g~D~~~~~~~  237 (380)
T pfam03237       158 PADVEVTIEDARALGPEYKEELRALYSDEEFARLLMGEWVDTSGSIFKRFELERCDVDEERPPEHREVIGGVDPAASRGG  237 (380)
T ss_pred             EEEEECCHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCEECCCCCEECHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCC
T ss_conf             20674566871326889999998768999999985886665788571478885464675568888559999867888889


Q ss_pred             CCEEEEEEEECCCCEEEEEEEHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCHHHHHHHCCCEEEECCCCC
Q ss_conf             71999999977399899994310259987999999983324870897263001117888888999997897477657777
Q 537021.9.peg.1  146 PFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATF  225 (251)
Q Consensus       146 p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~r~~G~~~~~~~~~~  225 (251)
T Consensus       238 D~t~~~v~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~~~~---i~id~~~~G~~~~~~l~~~~~~~---~~~~  311 (380)
T pfam03237       238 DYAALVVIAEVDGDKFYVLAREHERGLSPAEQAAIIKKLAERYNVIY---IYIDDTGGGESVAQLLRRELPGA---AFTV  311 (380)
T ss_pred             CCEEEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEE---EEEECCCCCCHHHHHHHHHCCCC---CCCE
T ss_conf             96699999965798599999998368899999999999986438759---99837864307999999866446---7110


Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCCEEC
Q ss_conf             76777589989999998607990789
Q 537021.9.peg.1  226 DDGSNGVEAGISDMLDRMRSGRWKVF  251 (251)
Q Consensus       226 ~kg~~sV~~GI~~l~~~~~~grl~Vf  251 (251)
T Consensus       312 ~~a~~~k~~~~~~v~~l~e~g~v~i~  337 (380)
T pfam03237       312 RPAPKGKNARVLKVSDLIESGRLKVP  337 (380)
T ss_pred             EECCCHHHHHHHHHHHHHHCCCEEEE
T ss_conf             58875199999999999988989994

This family represents a group of terminase proteins.

Probab=99.89  E-value=1.1e-22  Score=141.75  Aligned_cols=230  Identities=16%  Similarity=0.176  Sum_probs=174.3

Q ss_pred             CCCCCCCHHHHCCCCC---CEEEEECCCC--HHHHHHHHHHHC--CCCCEEEEEECCCCCCCHHHHHHCC-----CCCCC
Q ss_conf             9743369655033313---5899818989--749988631124--7587399992489998756556403-----67997
Q 537021.9.peg.1    1 LKAYEQGRDKWQSNTV---HYVWFDEEPP--EDVYFEGLTRIN--ATQGLVTLTLTPLKGRSPIIEHYLS-----ASSSD   68 (251)
Q Consensus         1 f~~~~q~~~~~~G~~~---~~i~~DE~~~--~~~~~~~~~r~~--~~~g~i~~~~nP~~~~~~~~~~~~~-----~~~~~   68 (251)
T Consensus       108 F~G~d-dp~klKSi~~~~~s~~WfEE~~e~s~e~~~e~l~~l~~~~~~~~~~~~snpv~~~pw~~~~w~~~~~Dek~~~d  186 (414)
T COG1783         108 FKGLD-DPAKLKSIAVNWISDLWFEEASEFSYEDDIELLVELRRRELKGHIILSSNPVSFNPWTYKHWLEFAVDEKKKAD  186 (414)
T ss_pred             EECCC-CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             94589-87885230100433555787763303456888777641223777246326434588538888888744355786


Q ss_pred             EEEEEEEHHHCCCCCHHHHHHHHH--CCCHHHHHHHHCCCCEEECCCEEECCCCEEEC-CCCCCCCCCEEEEEECCCCC-
Q ss_conf             599997713346688999999987--08973564330051001014300001203431-56546567435752003774-
Q 537021.9.peg.1   69 RQVIRMTINETPHYNEQERKRIID--SYPLHEREARTKGEPILGSGRIFPIVEEDIVI-NSLDIPEHWVQIGGMDFGWH-  144 (251)
Q Consensus        69 ~~~~~~t~~DNp~l~~~~~~~~~~--~~~~~~~~~~~~G~~~~~~g~v~~~~~~~~~~-~~~~~~~~~~~~~g~D~G~~-  144 (251)
T Consensus       187 t~~hhtT~~dn~fL~~~~v~~~ed~k~~d~d~yri~~~gev~v~~~~v~~~~e~~~~d~v~~~i~~i~~~s~gm~~Gf~~  266 (414)
T COG1783         187 TYIHHTTYRDNLFLGFDDVDELEDLKKNDPDLYRIVRDGEVGVKNGDVFDQFEVKPFDAVKFAIDNISRPSTGMDFGFTA  266 (414)
T ss_pred             EEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCEECCHHHCCCHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf             68886201356667778999998764128541238997789860752546321577288776677615565540242574


Q ss_pred             CCCEEEEEEEECCCCEEEEEEEHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCHHHHHHHCCCEEEECCCC
Q ss_conf             87199999997739989999431025998799999998332487089726300111788888899999789747765777
Q 537021.9.peg.1  145 HPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECAT  224 (251)
Q Consensus       145 ~p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~r~~G~~~~~~~~~  224 (251)
T Consensus       267 ~~n~l~~~~v~~~~k~l~~~~ey~~~~~~~d~~~~~i~e~n~~k~------~~~~dsAe~kl-i~yfk~~G~~~v~a---  336 (414)
T COG1783         267 KFNRLLKLAVDPGKKYLYIYVEYYANKMLDDKKTKDISEFNKTKS------VIALDSAEPKL-IQYFKDVGVGMVYA---  336 (414)
T ss_pred             CCCEEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCE------EEEECCCCHHH-HHHHHHCCCCCCCC---
T ss_conf             075778888704654047986112244343567899987541122------79704634778-89998628651135---


Q ss_pred             CCCCCCCHHHHHHHHHHH
Q ss_conf             776777589989999998
Q 537021.9.peg.1  225 FDDGSNGVEAGISDMLDR  242 (251)
Q Consensus       225 ~~kg~~sV~~GI~~l~~~  242 (251)
T Consensus       337 -~k~~~s~lq~~k~l~~f  353 (414)
T COG1783         337 -KKFKGSRLQKIKKLKRF  353 (414)
T ss_pred             -CCCCCCHHHHHHHHHHH
T ss_conf             -56763077878988851

Probab=99.67  E-value=3.4e-16  Score=106.78  Aligned_cols=229  Identities=15%  Similarity=0.148  Sum_probs=149.1

Q ss_pred             CCEEEEECC--CCHHHHHHHHHHHCCCCCE---EEEEECCCCCCCHHHHHHCCC---CCCCEE---------------EE
Q ss_conf             358998189--8974998863112475873---999924899987565564036---799759---------------99
Q 537021.9.peg.1   16 VHYVWFDEE--PPEDVYFEGLTRINATQGL---VTLTLTPLKGRSPIIEHYLSA---SSSDRQ---------------VI   72 (251)
Q Consensus        16 ~~~i~~DE~--~~~~~~~~~~~r~~~~~g~---i~~~~nP~~~~~~~~~~~~~~---~~~~~~---------------~~   72 (251)
T Consensus       120 ~~~~~~ee~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~nP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (462)
T TIGR01547       120 LADLWFEEASELTKEDIKELIPRLREPGGKNKFIIFSSNPESPLHWVYKDFIENLGEDEFRICDKPPYEYGVVDKKLYIL  199 (462)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCHHHHCCCCHHHHHEEECEEEE
T ss_conf             56565554443014468888876405777506999840889855305666543047760122101101322000000256


Q ss_pred             EEEHHHCCCCC----HHHHHHHHHCC--CHHHHHHHHCCCCEE-------------ECCCEEECCCCEEECCCCCCCCCC
Q ss_conf             97713346688----99999998708--973564330051001-------------014300001203431565465674
Q 537021.9.peg.1   73 RMTINETPHYN----EQERKRIIDSY--PLHEREARTKGEPIL-------------GSGRIFPIVEEDIVINSLDIPEHW  133 (251)
Q Consensus        73 ~~t~~DNp~l~----~~~~~~~~~~~--~~~~~~~~~~G~~~~-------------~~g~v~~~~~~~~~~~~~~~~~~~  133 (251)
T Consensus       200 ~~~~~dn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (462)
T TIGR01547       200 HSTYRDNPFLSGGDVEEYIQELEKLKDRDPALYRRILLGEWVSAADVWSLGLPVLTSEGILFKKLDVKAAYIKELPNDPS  279 (462)
T ss_pred             EEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf             74203465676115899999999863156134334442351012233220444434441112111002212343123210


Q ss_pred             EEEEEECCCCC--C-CCEEEEEEEECCCCE---E-EEEEEHHHCCCC-----HHHHHHHHHHCCCCCEEEECCCCCEECC
Q ss_conf             35752003774--8-719999999773998---9-999431025998-----7999999983324870897263001117
Q 537021.9.peg.1  134 VQIGGMDFGWH--H-PFAAGHLVWNRDSDV---I-YVVKNYRCREQT-----PIFHVAALKSWGKWLPWAWPHDGLQHDK  201 (251)
Q Consensus       134 ~~~~g~D~G~~--~-p~a~~~~~~~~~~~~---~-~i~de~~~~~~t-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~  201 (251)
T Consensus       280 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  353 (462)
T TIGR01547       280 DFVGGIDAGGVDGNSPSAYVLLGIEHGKKYYDGLEYLAEYYYSNALEQVKDAVLEYANELKQFVGVKEGI------YADN  353 (462)
T ss_pred             HHEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH------CCCC
T ss_conf             0013201476666530367887200000122211221010004630234554556555566566544321------0255


Q ss_pred             CCCCCHHHHHH------HCCC-EEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
Q ss_conf             88888899999------7897-4776577777677758998999999860799078
Q 537021.9.peg.1  202 RSGEQLSAQYR------RQGM-KMLPECATFDDGSNGVEAGISDMLDRMRSGRWKV  250 (251)
Q Consensus       202 ~~~~s~~e~~r------~~G~-~~~~~~~~~~kg~~sV~~GI~~l~~~~~~grl~V  250 (251)
T Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (462)
T TIGR01547       354 GDLKTFSDFLRLWLPGLEHGYNYFDVGAKKAPGAKLAVLDGIEVFSDLLAEGKLKF  409 (462)
T ss_pred             CHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf             21455544443201111210463102210000111234556777787751010222

All members are encoded by phage genomes or within prophage regions of bacterial genomes. This is a distinct family from the phage terminase family represented by IPR005021 from INTERPRO.; GO: 0006323 DNA packaging.

Probab=98.94  E-value=4.7e-09  Score=68.20  Aligned_cols=233  Identities=14%  Similarity=0.127  Sum_probs=138.8

Q ss_pred             CCCCCCHHHHCCCCCCEEEEECC----CCHHHHHHHHHHHC-CCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEEEEEEH
Q ss_conf             74336965503331358998189----89749988631124-75873999924899987565564036799759999771
Q 537021.9.peg.1    2 KAYEQGRDKWQSNTVHYVWFDEE----PPEDVYFEGLTRIN-ATQGLVTLTLTPLKGRSPIIEHYLSASSSDRQVIRMTI   76 (251)
Q Consensus         2 ~~~~q~~~~~~G~~~~~i~~DE~----~~~~~~~~~~~r~~-~~~g~i~~~~nP~~~~~~~~~~~~~~~~~~~~~~~~t~   76 (251)
T Consensus       117 FSsE-DPeSLRGPQFh~AW~DEl~kWk~PqETw~MLqFGLRLGe~PRqvVTTTPr--p~plLKaLl~d--ptv~~trm~T  191 (410)
T COG5323         117 FSSE-DPDSLRGPQFHLAWTDELLKWKEPQETWAMLQFGLRLGEDPRQVVTTTPR--PIPLLKALLAD--PTVALTRMGT  191 (410)
T ss_pred             ECCC-CHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHEECCCC--CCHHHHHHHCC--CCHHHHHCCC
T ss_conf             0358-80320485200677788744798488999998766516784010205998--62789988428--6125450543


Q ss_pred             HHC-CCCCHHHHHHHHHCCC-HHHHHHHHCCCCEEECCCEEECCCCEEECCCCCCCCCCEEEEEECCCC--C-CCCEEEE
Q ss_conf             334-6688999999987089-735643300510010143000012034315654656743575200377--4-8719999
Q 537021.9.peg.1   77 NET-PHYNEQERKRIIDSYP-LHEREARTKGEPILGSGRIFPIVEEDIVINSLDIPEHWVQIGGMDFGW--H-HPFAAGH  151 (251)
Q Consensus        77 ~DN-p~l~~~~~~~~~~~~~-~~~~~~~~~G~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~g~D~G~--~-~p~a~~~  151 (251)
T Consensus       192 a~NAgNLapgFl~t~a~rYgGTRLgrQEldGelvee~GaLw~r~dle~c~ea-~p~pL~RiVVAVDPPA~~g~~sCGIVV  270 (410)
T COG5323         192 AANAGNLAPGFLRTLASRYGGTRLGRQELDGELVEEDGALWRREDLERCREA-RPAPLDRIVVAVDPPATAGGDSCGIVV  270 (410)
T ss_pred             CCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCEEECCCCCCCCHHHHHHHHHC-CCCCCCEEEEEECCCCCCCCCCEEEEE
T ss_conf             2244565779999999984544113555287786367730028789999861-898702379972698767787511699


Q ss_pred             EEEECCCCEEEEEEEHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEEC-CCCCCCHHHHHHHCCCEEEECCCCCCCCCC
Q ss_conf             9997739989999431025998799999998332487089726300111-788888899999789747765777776777
Q 537021.9.peg.1  152 LVWNRDSDVIYVVKNYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHD-KRSGEQLSAQYRRQGMKMLPECATFDDGSN  230 (251)
Q Consensus       152 ~~~~~~~~~~~i~de~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~r~~G~~~~~~~~~~~kg~~  230 (251)
T Consensus       271 aG~-~~g-r~~VLADes~~g~~PagWArravAa~r~----heADa~VAEvNQGGeMVravLa~~Dp~~pv~lvRASrGK~  344 (410)
T COG5323         271 AGR-RDG-RAFVLADESARGLSPAGWARRAVAAARA----HEADALVAEVNQGGEMVRAVLAQADPPCPVKLVRASRGKR  344 (410)
T ss_pred             EEE-ECC-CEEEEECCCCCCCCCCHHHHHHHHHHHH----HHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCH
T ss_conf             885-058-1699612302478821268999999875----1134788877134179999996049998627666145631


Q ss_pred             CHHHHHHHHHHHHCCCCCE
Q ss_conf             5899899999986079907
Q 537021.9.peg.1  231 GVEAGISDMLDRMRSGRWK  249 (251)
Q Consensus       231 sV~~GI~~l~~~~~~grl~  249 (251)
T Consensus       345 ~---RAEPVAALYEQGRVr  360 (410)
T COG5323         345 A---RAEPVAALYEQGRVR  360 (410)
T ss_pred             H---CCCHHHHHHHCCCEE
T ss_conf             0---136169988556300

Probab=98.05  E-value=0.00069  Score=40.30  Aligned_cols=236  Identities=12%  Similarity=0.079  Sum_probs=118.4

Q ss_pred             CCCCCCHHHHCCCCCCEEEEECCC---CHHHHHHHHHHHCCCCCE-EEEEECCC-CCCCHHHHHHC-----CCC-----C
Q ss_conf             743369655033313589981898---974998863112475873-99992489-99875655640-----367-----9
Q 537021.9.peg.1    2 KAYEQGRDKWQSNTVHYVWFDEEP---PEDVYFEGLTRINATQGL-VTLTLTPL-KGRSPIIEHYL-----SAS-----S   66 (251)
Q Consensus         2 ~~~~q~~~~~~G~~~~~i~~DE~~---~~~~~~~~~~r~~~~~g~-i~~~~nP~-~~~~~~~~~~~-----~~~-----~   66 (251)
T Consensus       110 ~~ls~~~~~~dG~~~~~~i~DE~h~~~~~~~~~~l~sg~~~r~~~l~~~ITTag~~~~~~~~~~~~~~~~vl~g~~~~~d  189 (473)
T pfam03354       110 KALSNNGDQYDGGNPSLAIFDEMHEFKDRELVSTIVTGMRKQDNPQTIQITTAGPNRGGPYDEEREYIKRILEGDVERDD  189 (473)
T ss_pred             EEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf             99857898766998728998722304882789999876316888719997677889887189999999999708777678


Q ss_pred             CCEEEEEEEH-------------HHCCCC----CHHHH-HHHHHC--CC--HHHHHHHHCCCCEEE-CCCEEE--CCCCE
Q ss_conf             9759999771-------------334668----89999-999870--89--735643300510010-143000--01203
Q 537021.9.peg.1   67 SDRQVIRMTI-------------NETPHY----NEQER-KRIIDS--YP--LHEREARTKGEPILG-SGRIFP--IVEED  121 (251)
Q Consensus        67 ~~~~~~~~t~-------------~DNp~l----~~~~~-~~~~~~--~~--~~~~~~~~~G~~~~~-~g~v~~--~~~~~  121 (251)
T Consensus       190 ~~~f~~i~~~d~~dd~~D~~~W~kANP~lg~~~~~~~l~~~~~~a~~~p~~~~~f~~k~lN~w~~~~~~~wl~~~~w~~~  269 (473)
T pfam03354       190 DSYFGLIYELDNDDEVKDPAKWIKANPLLGSSLTRDNLLKGLIDAIGSPLKMNKFLTKNFNLWMGQDTDSWLTLQDWEQA  269 (473)
T ss_pred             CCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHC
T ss_conf             76699997169887768989999859676788799999999999864937689999972386344544657899999747


Q ss_pred             EECCCCCCCCCCEEEEEECCCCCC-CCEEEEEEEECCCCEEEEEEEHHHCCCCH--------------------------
Q ss_conf             431565465674357520037748-71999999977399899994310259987--------------------------
Q 537021.9.peg.1  122 IVINSLDIPEHWVQIGGMDFGWHH-PFAAGHLVWNRDSDVIYVVKNYRCREQTP--------------------------  174 (251)
Q Consensus       122 ~~~~~~~~~~~~~~~~g~D~G~~~-p~a~~~~~~~~~~~~~~i~de~~~~~~t~--------------------------  174 (251)
T Consensus       270 -~~~~~~-~~g~~~~~G~DlS~~~Dlta~~~-~~~-~~~~~~~~~~~~ip~~~~~~~~~~~~~y~~w~~~G~~l~~~~g~  345 (473)
T pfam03354       270 -VFPPFD-INGRRVYIGVDLSMKGDVTALVF-VYP-LDGKFYLHAHSFIPESQAEQIKQDGINYREFIDRGECLTLHDGG  345 (473)
T ss_pred             -CCCHHH-HCCCEEEEEEEECCCCCCCEEEE-EEE-ECCEEEEEEEEECCHHHHHHHHCCCCCHHHHHHHCCEEEECCCC
T ss_conf             -898578-47996999984035776413799-999-78999999986568627666540155689999709879944898


Q ss_pred             ----HHHHHHHHHCCC--CCEEEECCCCCEECCCCCCCHHHHHHHCCC--EEEECCCCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf             ----999999983324--870897263001117888888999997897--477657777767775899899999986079
Q 537021.9.peg.1  175 ----IFHVAALKSWGK--WLPWAWPHDGLQHDKRSGEQLSAQYRRQGM--KMLPECATFDDGSNGVEAGISDMLDRMRSG  246 (251)
Q Consensus       175 ----~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~s~~e~~r~~G~--~~~~~~~~~~kg~~sV~~GI~~l~~~~~~g  246 (251)
T Consensus       346 ~iD~~~v~~~i~~~~~~~~~~v~----~i~yD~~~a~~~~~~le~~g~~~~~v~~----~Q~~~~ls~~~k~le~~~~~g  417 (473)
T pfam03354       346 MIDPNQIIPWILDFITKTGLDVQ----AIGYDPWQAKYFIDRLESTFLDWPLVEI----RQGFFSLSNPIKELQELVAEN  417 (473)
T ss_pred             EECHHHHHHHHHHHHHHCCCCEE----EEEECHHHHHHHHHHHHHCCCCCCEEEE----CCCCCCCCHHHHHHHHHHHCC
T ss_conf             32699999999999996299725----9984667899999999961899866984----687630077999999999779


Q ss_pred             CCE
Q ss_conf             907
Q 537021.9.peg.1  247 RWK  249 (251)
Q Consensus       247 rl~  249 (251)
T Consensus       418 ~i~  420 (473)
T pfam03354       418 KLT  420 (473)
T ss_pred             CEE
T ss_conf             989

The majority of the members of this family are bacteriophage proteins, several of which are thought to be terminase large subunit proteins. There are also a number of bacterial proteins of unknown function.

Probab=97.00  E-value=0.021  Score=32.24  Aligned_cols=235  Identities=12%  Similarity=0.047  Sum_probs=120.8

Q ss_pred             CCCHHHHCCCCCCEEEEECC---CCH-HHHHHHHHHH-CCCCCEEEEEECC-CCCCCHHHHHHCC------C--CCCCEE
Q ss_conf             36965503331358998189---897-4998863112-4758739999248-9998756556403------6--799759
Q 537021.9.peg.1    5 EQGRDKWQSNTVHYVWFDEE---PPE-DVYFEGLTRI-NATQGLVTLTLTP-LKGRSPIIEHYLS------A--SSSDRQ   70 (251)
Q Consensus         5 ~q~~~~~~G~~~~~i~~DE~---~~~-~~~~~~~~r~-~~~~g~i~~~~nP-~~~~~~~~~~~~~------~--~~~~~~   70 (251)
T Consensus       174 aa~~~~~Dg~~~~~~I~DEih~f~~~~~~~~~~~~g~~ar~~~l~~~ITT~g~~~~g~~~q~~~y~k~vl~g~~~d~~~f  253 (546)
T COG4626         174 AADPNTVDGLNSVGAIIDELHLFGKQEDMYSEAKGGLGARPEGLVVYITTSGDPPAGVFKQKLQYAKDVLDGKIKDPHFF  253 (546)
T ss_pred             HCCCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf             04887556787654887637541678999999974201576763999966898874189999999999866987882107


Q ss_pred             EEEEEHH-------------HCCCCCH----H-HHHHHHH-CCCHHHHHHHH----CCCCEEECCCEEE--CCCCEEEC-
Q ss_conf             9997713-------------3466889----9-9999987-08973564330----0510010143000--01203431-
Q 537021.9.peg.1   71 VIRMTIN-------------ETPHYNE----Q-ERKRIID-SYPLHEREART----KGEPILGSGRIFP--IVEEDIVI-  124 (251)
Q Consensus        71 ~~~~t~~-------------DNp~l~~----~-~~~~~~~-~~~~~~~~~~~----~G~~~~~~g~v~~--~~~~~~~~-  124 (251)
T Consensus       254 ~~i~e~Dd~~e~~dpe~w~kaNPnlg~sv~~~~l~s~~~ka~~~~q~~-~dF~tK~lNi~~~~~~~~~~~~~w~~~~~~~  332 (546)
T COG4626         254 PVIYELDEEGEHDDPENWAKANPNLGVSVDEAFLYSEYRKARNAPQEA-RDFMTKHLNIWIGASDAWFGADFWEQQGRTV  332 (546)
T ss_pred             EEEEECCCCCCCCCHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCHHC-HHHHHCCCCEEECHHHCCCCHHHHHHHCCCC
T ss_conf             999976882000386777430887651420777776999873181112-2777512331510010246868999731445


Q ss_pred             -CCCCCCCCCEEEEEECCCCC-CCCEEEEEEEECCCCEEEEEE--------------------EHHHCCC---------C
Q ss_conf             -56546567435752003774-871999999977399899994--------------------3102599---------8
Q 537021.9.peg.1  125 -NSLDIPEHWVQIGGMDFGWH-HPFAAGHLVWNRDSDVIYVVK--------------------NYRCREQ---------T  173 (251)
Q Consensus       125 -~~~~~~~~~~~~~g~D~G~~-~p~a~~~~~~~~~~~~~~i~d--------------------e~~~~~~---------t  173 (251)
T Consensus       333 lde~-~~~gq~c~~G~Dls~~~D~ts~al~f~~~~~~~~i~~~h~wv~~~~~~~~k~~~~~~~ew~k~G~lTit~~~~id  411 (546)
T COG4626         333 LDEI-LLRGQVCYGGIDLSGLDDLTSMALVGRYRETDEWIGWGHAWVHRAAVKRRKSEAPRLQEWVKAGDLTITRRDLID  411 (546)
T ss_pred             CCHH-HHCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHCCCHHHCCHHHHHHHHCCCEEEECCCCCC
T ss_conf             6535-514866899733234555541068875378762788424551243113201024668999975927973787313


Q ss_pred             HHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCE
Q ss_conf             7999999983324870897263001117888888999997897477657777767775899899999986079907
Q 537021.9.peg.1  174 PIFHVAALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDMLDRMRSGRWK  249 (251)
Q Consensus       174 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~r~~G~~~~~~~~~~~kg~~sV~~GI~~l~~~~~~grl~  249 (251)
T Consensus       412 ~~~I~ew~~~~~~~~~i----~~v~~D~~g~~~~~~~l~~~g~~lv~i~Q~~~----~l~~~~k~~e~~~~~g~i~  479 (546)
T COG4626         412 YAEIVEWFMEIREKFLI----KLVGFDPSGAGEFRDALAEAGIKVVGIPQGFK----KLSGAIKTIERKLAEGVLV  479 (546)
T ss_pred             HHHHHHHHHHHHHHCCC----CEEEECCCCHHHHHHHHHHCCCCEEECCCHHH----HHCCHHHHHHHHHHCCCEE
T ss_conf             89999999999873785----18855644328899999847995434450055----5474267899998669589

Probab=99.08  E-value=3.8e-11  Score=79.54  Aligned_cols=71  Identities=59%  Similarity=1.137  Sum_probs=65.6

Q ss_pred             CCCCCCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEE
Q ss_conf             97433696550333135899818989749988631124758739999248999875655640367997599
Q 537021.9.peg.1    1 LKAYEQGRDKWQSNTVHYVWFDEEPPEDVYFEGLTRINATQGLVTLTLTPLKGRSPIIEHYLSASSSDRQV   71 (251)
Q Consensus         1 f~~~~q~~~~~~G~~~~~i~~DE~~~~~~~~~~~~r~~~~~g~i~~~~nP~~~~~~~~~~~~~~~~~~~~~   71 (251)
T Consensus         7 fksfeqgr~kwq~~~v~y~wfdeqpp~dvy~eGiTrtnrt~g~~~vtftPlkg~s~vva~fl~an~pdR~v   77 (79)
T COG5565           7 FKSFEQGREKWQARTVDYVWFDEQPPEDVYFEGITRTNRTSGITIVTFTPLKGMSRVVARFLAANTPDRAV   77 (79)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC
T ss_conf             23698877876067567776465873776650310202445417899532210789999998707975445

Probab=94.71  E-value=0.28  Score=26.20  Aligned_cols=156  Identities=13%  Similarity=0.007  Sum_probs=94.6

Q ss_pred             CCCCCCHHHHCCCCCCEEEEECCCCHHHHHHHHH---HHCCCCCEEEEEECCCCCCCHHHHHHCC--CCCCCEEEEEEEH
Q ss_conf             7433696550333135899818989749988631---1247587399992489998756556403--6799759999771
Q 537021.9.peg.1    2 KAYEQGRDKWQSNTVHYVWFDEEPPEDVYFEGLT---RINATQGLVTLTLTPLKGRSPIIEHYLS--ASSSDRQVIRMTI   76 (251)
Q Consensus         2 ~~~~q~~~~~~G~~~~~i~~DE~~~~~~~~~~~~---r~~~~~g~i~~~~nP~~~~~~~~~~~~~--~~~~~~~~~~~t~   76 (251)
T Consensus       122 ~ALSSnPknlRg~qG-~VviDEaAFHE~ldEllkAA~altmWGa~vRviStHNGvDnlFnQ~iQear~grk~ysvH~iTl  200 (509)
T COG4373         122 TALSSNPKNLRGKQG-KVVIDEAAFHEDLDELLKAAAALTMWGAPVRVISTHNGVDNLFNQMIQEARQGRKKYSVHSITL  200 (509)
T ss_pred             EECCCCCCCCCCCCC-CEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEH
T ss_conf             660479745546788-4886236656539999998778765177248996268701789999999870255531788865


Q ss_pred             HHC--------------C-CCCHH---HHHHHHHCCC-HHHHHHHHCCCCEEECCCEEECC--CCE--------------
Q ss_conf             334--------------6-68899---9999987089-73564330051001014300001--203--------------
Q 537021.9.peg.1   77 NET--------------P-HYNEQ---ERKRIIDSYP-LHEREARTKGEPILGSGRIFPIV--EED--------------  121 (251)
Q Consensus        77 ~DN--------------p-~l~~~---~~~~~~~~~~-~~~~~~~~~G~~~~~~g~v~~~~--~~~--------------  121 (251)
T Consensus       201 dDAiadGLy~RIc~v~~~~w~pE~Ea~w~a~l~~~a~t~eda~eEy~C~Pk~s~gAYIphalie~a~~~~vp~l~fe~~~  280 (509)
T COG4373         201 DDAIADGLYERICNVDRPAWAPEVEAKWLAELRAIAGTDEDAQEEYMCNPKDSTGAYIPHALIEAAVAAEVPDLIFELGS  280 (509)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCH
T ss_conf             77777789999982677456756788999988865698144577628775667766466789998875479851797574


Q ss_pred             --EECC-------------C------CCCCCCCEEEEEECCCCC-CCCEEEEEEEECCC
Q ss_conf             --4315-------------6------546567435752003774-87199999997739
Q 537021.9.peg.1  122 --IVIN-------------S------LDIPEHWVQIGGMDFGWH-HPFAAGHLVWNRDS  158 (251)
Q Consensus       122 --~~~~-------------~------~~~~~~~~~~~g~D~G~~-~p~a~~~~~~~~~~  158 (251)
T Consensus       281 ~f~~~~~~~r~~~~~~~cl~~l~P~Lqalnp~~r~~fGvDfaR~~DLsv~~v~e~~~dt  339 (509)
T COG4373         281 EFHDIPAWLRESEVLTWCLPDLRPALQALNPGGRLYFGVDFARKRDLSVLWVWEKVGDT  339 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEECCCH
T ss_conf             55423566424566665344356898732999716521220225673499987445523

Probab=94.24  E-value=0.15  Score=27.60  Aligned_cols=40  Identities=20%  Similarity=0.076  Sum_probs=28.8

Q ss_pred             CEEEEEEEHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEEC
Q ss_conf             989999431025998799999998332487089726300111
Q 537021.9.peg.1  159 DVIYVVKNYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHD  200 (251)
Q Consensus       159 ~~~~i~de~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~~~~  200 (251)
T Consensus       120 n~~iIvDEa--QN~t~~~lk~ilTRiG~~SK~vi~GD~~Q~D  159 (205)
T pfam02562       120 DAFIILDEA--QNTTPEQMKMFLTRIGFNSKMVVTGDITQID  159 (205)
T ss_pred             CCEEEEECH--HCCCHHHHHHHHHHCCCCCEEEEECCHHHCC
T ss_conf             688999722--1399999999984217996899947866517

PhoH is a cytoplasmic protein and predicted ATPase that is induced by phosphate starvation.

 Score = 58.6 bits (141), Expect = 1e-09
 Identities = 20/139 (14%), Positives = 43/139 (30%), Gaps = 12/139 (8%)

Query: 109 LGSGRIF--PIVEEDIVINSLDIPEHWVQIGGMDFGW-HHPFAAGHLVWNRDSDVIYVVK 165
           LGSG +    +  E+ +I   ++        G+DFG+   P A     +++  + IY + 
Sbjct: 23  LGSGVVPFENLQIEEGIITDAEVARFDNIRQGLDFGYGPDPLAFVRWHYDKRKNRIYAID 82

Query: 166 NYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATF 225
                + +       ++                        + A     G+  +      
Sbjct: 83  ELVDHKVSLKRTADFVRKNKYESARIIADSS------EPRSIDALKLEHGINRIEGA--- 133

Query: 226 DDGSNGVEAGISDMLDRMR 244
             G + VE G   + +   
Sbjct: 134 KKGPDSVEHGERWLDELDA 152

Probab=99.79  E-value=1.7e-19  Score=123.44  Aligned_cols=130  Identities=17%  Similarity=0.235  Sum_probs=100.0

Q ss_pred             CCCCE-EECCCEEE-CCC-CEEECCCCCCCCCCEEEEEECCCCC-CCCEEEEEEEECCCCEEEEEEEHHHCCCCHHHHHH
Q ss_conf             05100-10143000-012-0343156546567435752003774-87199999997739989999431025998799999
Q 537021.9.peg.1  104 KGEPI-LGSGRIFP-IVE-EDIVINSLDIPEHWVQIGGMDFGWH-HPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVA  179 (251)
Q Consensus       104 ~G~~~-~~~g~v~~-~~~-~~~~~~~~~~~~~~~~~~g~D~G~~-~p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~~~  179 (251)
                      .|.|. +++|+|+. .+. +...+.+.++.....+++|+||||+ +|+|+++++++++++.+||++|+|..+++++++++
T Consensus        17 ~g~~v~~g~g~v~fd~~~~~~~~i~d~ei~~~~~~~~GiDfG~~~dpta~v~~~~d~~~~~~yi~~E~y~~~~t~~~~a~   96 (212)
T 2wbn_A           17 RGSHMALGSGVVPFENLQIEEGIITDAEVARFDNIRQGLDFGYGPDPLAFVRWHYDKRKNRIYAIDELVDHKVSLKRTAD   96 (212)
T ss_dssp             ----------CCSCTTEEECTTCSCHHHHHHCCCEEEEEECCBTTBCEEEEEEEEETTTTEEEEEEEEEESSCCHHHHHH
T ss_pred             CCCEEEECCCEEECCCCEEEECCCCHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEEEHEECCCCHHHHHH
T ss_conf             78768852543633774787168896784056726997854999888589999998989999998721005899999999


Q ss_pred             HHHHCCCCCEEEECCCCCEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             998332487089726300111788888899999789747765777776777589989999998
Q 537021.9.peg.1  180 ALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDMLDR  242 (251)
Q Consensus       180 ~i~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~r~~G~~~~~~~~~~~kg~~sV~~GI~~l~~~  242 (251)
                      .|+++......      ...+++.+.++.++++++|++..++   .+|++++|++||+.|++.
T Consensus        97 ~i~~~~~~~~~------~~~~~a~~~~~~~~~~~~G~~~~~~---~~k~~~sv~~gi~~l~~~  150 (212)
T 2wbn_A           97 FVRKNKYESAR------IIADSSEPRSIDALKLEHGINRIEG---AKKGPDSVEHGERWLDEL  150 (212)
T ss_dssp             HHHHTTCTTSC------EEECTTCHHHHHHHHHTTCCTTEEE---CCSCGGGHHHHHHHHHTS
T ss_pred             HHHHHCCCCCE------EEECCCCHHHHHHHHHHCCCCEEEC---CCCCCCHHHHHHHHHHCC
T ss_conf             99974788875------9987888889999999789977754---667830599999999728

Probab=94.09  E-value=0.064  Score=28.50  Aligned_cols=115  Identities=9%  Similarity=0.029  Sum_probs=68.0

Q ss_pred             CCCCCEEEEEECC--CCC-CCCEEEEEEEECCCCEEEEEEEHHHCCCCHHHHHHHHHHCCCCC--EEEECCCCCEECCCC
Q ss_conf             6567435752003--774-87199999997739989999431025998799999998332487--089726300111788
Q 537021.9.peg.1  129 IPEHWVQIGGMDF--GWH-HPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAALKSWGKWL--PWAWPHDGLQHDKRS  203 (251)
Q Consensus       129 ~~~~~~~~~g~D~--G~~-~p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~  203 (251)
                      +.+...+++|+|.  |.. |.+|+.++  |-.......+.+|+....++..+++.|.+.+...  ..+     .+..++.
T Consensus        55 P~~g~~YvigvD~A~G~g~DyS~i~V~--Dvt~~~~~qVA~~r~n~i~p~~~a~ii~~i~~~Yn~a~v-----~vE~Nn~  127 (232)
T 3c6a_A           55 PKEGRKYVATLDCSEGRGQDYHALQII--DITEFPYKQVAVYHSNTTSHFILPDIVFKYLMMYNECPV-----YIELNST  127 (232)
T ss_dssp             CCTTCCEEEEEECCCSSSSCCEEEEEE--ECSSSSEEEEEEEEESCCCTTTHHHHHHHHHHHTTSCCE-----EEBCSHH
T ss_pred             CCCCCEEEEEEECCCCCCCCCCEEEEE--ECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEE-----EEEECCC
T ss_conf             899984999997478768887879999--767987148999740366878999999999987055739-----9997786


Q ss_pred             CCCHHHHHH-HCCCE-EEEC---CCCCCCCCCCHHHHHHHHHHHHCCCCCEE
Q ss_conf             888899999-78974-7765---77777677758998999999860799078
Q 537021.9.peg.1  204 GEQLSAQYR-RQGMK-MLPE---CATFDDGSNGVEAGISDMLDRMRSGRWKV  250 (251)
Q Consensus       204 ~~s~~e~~r-~~G~~-~~~~---~~~~~kg~~sV~~GI~~l~~~~~~grl~V  250 (251)
                      |..+++.++ +.+.. +...   .......+.+...+|..++.++++++++|
T Consensus       128 G~~v~~~l~~~~~Y~Nl~~~~~~~~Gf~TT~~sK~~~~~~Lk~lie~~~l~i  179 (232)
T 3c6a_A          128 GVSIAKSLAMDLEYDNIICDSFIDLGMKQSKRSKAMGCSALKDLIEKDKLII  179 (232)
T ss_dssp             HHHHHHHHHHTSCCCCBCCSBTTBSSBCCCHHHHHHHHHHHHHHHHTTCEEC
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCEEE
T ss_conf             7999999988744773024244566744342019999999999997185498

Probab=99.63  E-value=1.4e-14  Score=96.94  Aligned_cols=240  Identities=11%  Similarity=0.059  Sum_probs=151.0

Q ss_pred             CCCHHHHCCCCCCEEEEECCC---C-HHHHHHHHHHHCC-CCCEEEEEECCCCCCCHHHHHHCCC--CCCCEEEEEEEHH
Q ss_conf             369655033313589981898---9-7499886311247-5873999924899987565564036--7997599997713
Q 537021.9.peg.1    5 EQGRDKWQSNTVHYVWFDEEP---P-EDVYFEGLTRINA-TQGLVTLTLTPLKGRSPIIEHYLSA--SSSDRQVIRMTIN   77 (251)
Q Consensus         5 ~q~~~~~~G~~~~~i~~DE~~---~-~~~~~~~~~r~~~-~~g~i~~~~nP~~~~~~~~~~~~~~--~~~~~~~~~~t~~   77 (251)
                      ..++++.||.+++.+++||+.   . .+.|..+.+.++. +.+++++++||.+ .++++..|...  ...+...+...|.
T Consensus       263 a~~~da~RG~s~~~l~lDE~Afi~~~~e~~~~~~~~l~~g~~~kiii~STpnG-~n~fy~~~~~a~~g~~~~~~~~~~w~  341 (592)
T 3cpe_A          263 ASSPDAVRGNSFAMIYIEDCAFIPNFHDSWLAIQPVISSGRRSKIIITTTPNG-LNHFYDIWTAAVEGKSGFEPYTAIWN  341 (592)
T ss_dssp             ECCHHHHHHSCCSEEEEETGGGCTTHHHHHHHHHHHHSSSSCCEEEEEECCCT-TSHHHHHHHHHHTTCSSCEEEEECGG
T ss_pred             CCCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHCCCCCCCCCCEEEEECCCCC-CCCCHHHHHHHHHCCCCCCCEECCCC
T ss_conf             47886666776663275313204068888753023343688736999779988-76327899887407776674123434


Q ss_pred             HCCC--------CCH--HHHHHHHHCCCHHHHHHHHCCCCEEECCCEEECCCCEEEC-----------CC-CCCCCCCEE
Q ss_conf             3466--------889--9999998708973564330051001014300001203431-----------56-546567435
Q 537021.9.peg.1   78 ETPH--------YNE--QERKRIIDSYPLHEREARTKGEPILGSGRIFPIVEEDIVI-----------NS-LDIPEHWVQ  135 (251)
Q Consensus        78 DNp~--------l~~--~~~~~~~~~~~~~~~~~~~~G~~~~~~g~v~~~~~~~~~~-----------~~-~~~~~~~~~  135 (251)
                      +.|-        .++  .+.++.+...+...++++++++|...++.++....-....           .. ..+.+...+
T Consensus       342 ~~per~~~d~~~~~~~~~w~~e~i~~~s~~~F~QEy~~eF~~s~~~vf~~~~l~~~~~~~~~~~~~~~~iye~p~~~~~Y  421 (592)
T 3cpe_A          342 SVKERLYNDEDIFDDGWQWSIQTINGSSLAQFRQEHTAAFEGTSGTLISGMKLAVMDFIEVTPDDHGFHQFKKPEPDRKY  421 (592)
T ss_dssp             GSGGGGBCTTSBBCTTHHHHHHHHTTSCHHHHHHHHSCCCTTSCSBSSCHHHHTTCCCCCCCCCSSSEEESSCCCTTCCE
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCE
T ss_conf             57763355421000437999998745775553014343323454305677898762022220347781332446766602


Q ss_pred             EEEECCCC--C-CCCEEEEEEEECCCCEEEEEEEHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCHHHHHH
Q ss_conf             75200377--4-87199999997739989999431025998799999998332487089726300111788888899999
Q 537021.9.peg.1  136 IGGMDFGW--H-HPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYR  212 (251)
Q Consensus       136 ~~g~D~G~--~-~p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~r  212 (251)
                      ++|+|.+.  . |.+++.++  +.......++.+++..+.+...+++.|.+.+......   -..+..++.|..+++.|+
T Consensus       422 vigvDvA~G~~~DySai~Vi--dv~~~~~eqVa~~~~n~i~~~~~a~~I~~l~~~YN~a---~V~VE~N~~G~~Vi~~L~  496 (592)
T 3cpe_A          422 IATLDCSEGRGQDYHALHII--DVTDDVWEQVGVLHSNTISHLILPDIVMRYLVEYNEC---PVYIELNSTGVSVAKSLY  496 (592)
T ss_dssp             EEEEECCSSBTTBCEEEEEE--ECSSSSEEEEEEEEESSSCTTTHHHHHHHHHHHTTSC---CEEEEESHHHHHHHHHHH
T ss_pred             EEEEECCCCCCCCCEEEEEE--CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCC---EEEEEECCCHHHHHHHHH
T ss_conf             68851244577773279994--1478761899998358889899999999999972884---899997984999999998


Q ss_pred             -HCCCEEEECCCCCC----CCCCCHHHHHHHHHHHHCCCCCEE
Q ss_conf             -78974776577777----677758998999999860799078
Q 537021.9.peg.1  213 -RQGMKMLPECATFD----DGSNGVEAGISDMLDRMRSGRWKV  250 (251)
Q Consensus       213 -~~G~~~~~~~~~~~----kg~~sV~~GI~~l~~~~~~grl~V  250 (251)
                       +.+..-........    ..+.+...+|..|+.+|++|++.|
T Consensus       497 ~dl~y~nl~~~~~~~~Gf~tT~ksK~~~is~Lk~liE~~~i~i  539 (592)
T 3cpe_A          497 MDLEYEGVICDSYTDLGMKQTKRTKAVGCSTLKDLIEKDKLII  539 (592)
T ss_dssp             TTSCCSCEECSSSSCSSEECCHHHHHHHHHHHHHHHHTTSEEC
T ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
T ss_conf             8745575146776777875784559999999999997498698

Probab=98.91  E-value=9.5e-09  Score=65.39  Aligned_cols=104  Identities=12%  Similarity=0.106  Sum_probs=76.8

Q ss_pred             CCCHHHHCCCCCCEEEEECCC---C-HHHHHHHHHHH-CCCCCEEEEEECCCCCCCHHHHHHCCC--CCCCEEEEEEEHH
Q ss_conf             369655033313589981898---9-74998863112-475873999924899987565564036--7997599997713
Q 537021.9.peg.1    5 EQGRDKWQSNTVHYVWFDEEP---P-EDVYFEGLTRI-NATQGLVTLTLTPLKGRSPIIEHYLSA--SSSDRQVIRMTIN   77 (251)
Q Consensus         5 ~q~~~~~~G~~~~~i~~DE~~---~-~~~~~~~~~r~-~~~~g~i~~~~nP~~~~~~~~~~~~~~--~~~~~~~~~~t~~   77 (251)
                      ..+.++.||.+.+.+++||+.   . .++|..+++++ .+.+|++++++||.+ .+|+|+.|...  ...++..+...|.
T Consensus       263 a~s~da~RG~~~~~lilDE~Afi~~~~e~~~~~~~~~~s~~~GkiIiiSTPNG-~N~FYdl~~~A~~g~n~f~~~~~~W~  341 (385)
T 2o0j_A          263 ASSPDAVRGNSFAMIYIEDCAFIPNFHDSWLAIQPVISSGRRSKIIITTTPNG-LNHFYDIWTAAVEGKSGFEPYTAIWN  341 (385)
T ss_dssp             ECSHHHHHTSCCSEEEEESGGGSTTHHHHHHHHHHHHHSTTCCEEEEEECCCS-SSHHHHHHHHHHTTCSSCEEEEECGG
T ss_pred             CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC-CCHHHHHHHHHHHCCCCCEEEEECCE
T ss_conf             34556545420254203265410026888875313422489803999989998-70499999998708888637861401


Q ss_pred             HCC-------CCCHH---HHHHHHHCCCHHHHHHHHCCCCEE
Q ss_conf             346-------68899---999998708973564330051001
Q 537021.9.peg.1   78 ETP-------HYNEQ---ERKRIIDSYPLHEREARTKGEPIL  109 (251)
Q Consensus        78 DNp-------~l~~~---~~~~~~~~~~~~~~~~~~~G~~~~  109 (251)
                      +.|       .++++   +.++.+..+++..++|+++++|..
T Consensus       342 ~~p~r~~~~~~~~dee~~~~~~~~~~~s~~~F~QEYeceFlg  383 (385)
T 2o0j_A          342 SVKERLYNDEDIFDDGWQWSIQTINGSSLAQFRQEHTAAFEG  383 (385)
T ss_dssp             GSGGGGBCTTSBBCTTHHHHHHHHHTSCHHHHHHHHSCCCSS
T ss_pred             ECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCEECC
T ss_conf             055520468889807999999987559999999984986078

 Score = 79.6 bits (196), Expect = 4e-16
 Identities = 20/158 (12%), Positives = 44/158 (27%), Gaps = 15/158 (9%)

Query: 96  LHEREARTKGEPILGSGRIFP-IVEEDIVINSLDIPEHWVQIGGMDFGW-HHPFAAGHLV 153
                 R     +      F  +  E+ +I   ++        G+DFG+   P A     
Sbjct: 11  SSGLVPRGSHXALGSGVVPFENLQIEEGIITDAEVARFDNIRQGLDFGYGPDPLAFVRWH 70

Query: 154 WNRDSDVIYVVKNYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRR 213
           +++  + IY +      + +       ++         +    +  D      + A    
Sbjct: 71  YDKRKNRIYAIDELVDHKVSLKRTADFVRKNK------YESARIIADSSEPRSIDALKLE 124

Query: 214 QGMKMLPECATFDDGSNGVEAGISDMLDRMRSGRWKVF 251
            G+  +        G + VE G       +      V 
Sbjct: 125 HGINRIEGA---KKGPDSVEHGE----RWLDELDAIVI 155

Probab=99.90  E-value=4.1e-24  Score=149.21  Aligned_cols=148  Identities=14%  Similarity=0.132  Sum_probs=121.2

Q ss_pred             HHHCCCHHHHHHHHCCCCE--EECCCEEECCCC-EEECCCCCCCCCCEEEEEECCCCC-CCCEEEEEEEECCCCEEEEEE
Q ss_conf             9870897356433005100--101430000120-343156546567435752003774-871999999977399899994
Q 537021.9.peg.1   90 IIDSYPLHEREARTKGEPI--LGSGRIFPIVEE-DIVINSLDIPEHWVQIGGMDFGWH-HPFAAGHLVWNRDSDVIYVVK  165 (251)
Q Consensus        90 ~~~~~~~~~~~~~~~G~~~--~~~g~v~~~~~~-~~~~~~~~~~~~~~~~~g~D~G~~-~p~a~~~~~~~~~~~~~~i~d  165 (251)
                      .++.++++.|+++++|+|.  .++|.||..|++ .|++.++++++.+++++|+|||++ +|+|++++++++.++.+|+++
T Consensus         3 a~k~~dp~~y~~~~~G~~~~~~~~g~vy~~~~~~~~~i~~~~~~~~~~~~~g~D~G~~~~p~a~~~~~~~~~~~~~~i~~   82 (212)
T 2wbn_A            3 SSHHHHHHSSGLVPRGSHXALGSGVVPFENLQIEEGIITDAEVARFDNIRQGLDFGYGPDPLAFVRWHYDKRKNRIYAID   82 (212)
T ss_dssp             ------------------------CCSCTTEEECTTCSCHHHHHHCCCEEEEEECCBTTBCEEEEEEEEETTTTEEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCEEEECCCEEECCCCEEECCCCCHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEE
T ss_conf             65444333456012687477515425058756852678867852356369977048998885899999978899899998


Q ss_pred             EHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf             31025998799999998332487089726300111788888899999789747765777776777589989999998607
Q 537021.9.peg.1  166 NYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDMLDRMRS  245 (251)
Q Consensus       166 e~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~r~~G~~~~~~~~~~~kg~~sV~~GI~~l~~~~~~  245 (251)
                      |+|.+++++.++++.|+++++...      ....|++.++++.++++++|+++.++.   ++++++|.+||+.    |++
T Consensus        83 e~~~~~~~~~~~a~~l~~~~~~~~------~~~~D~A~~~~i~~l~~~~G~~~~~a~---k~~~~~i~~~~~~----l~~  149 (212)
T 2wbn_A           83 ELVDHKVSLKRTADFVRKNKYESA------RIIADSSEPRSIDALKLEHGINRIEGA---KKGPDSVEHGERW----LDE  149 (212)
T ss_dssp             EEEESSCCHHHHHHHHHHTTCTTS------CEEECTTCHHHHHHHHHTTCCTTEEEC---CSCGGGHHHHHHH----HHT
T ss_pred             EEEECCCCHHHHHHHHHHHCCCCC------CCCCCCCCCCHHHHHHHHCCCCEEECC---CCCCCHHHHHHHH----HHH
T ss_conf             602158899999999997456877------531458773258999986897653125---5587709999999----982


Q ss_pred             CCCEE
Q ss_conf             99078
Q 537021.9.peg.1  246 GRWKV  250 (251)
Q Consensus       246 grl~V  250 (251)
                      ++..+
T Consensus       150 ~~~~~  154 (212)
T 2wbn_A          150 LDAIV  154 (212)
T ss_dssp             SSEEE
T ss_pred             CCCEE
T ss_conf             78734

Probab=98.13  E-value=2.4e-06  Score=53.19  Aligned_cols=141  Identities=8%  Similarity=-0.095  Sum_probs=88.4

Q ss_pred             CCCEEECCCEEECCCCEEE----CCCCCCCCCCEEEEEECCCC---CCCCEEEEEEEECCCCEEEEEEEHHHCCCCHHHH
Q ss_conf             5100101430000120343----15654656743575200377---4871999999977399899994310259987999
Q 537021.9.peg.1  105 GEPILGSGRIFPIVEEDIV----INSLDIPEHWVQIGGMDFGW---HHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFH  177 (251)
Q Consensus       105 G~~~~~~g~v~~~~~~~~~----~~~~~~~~~~~~~~g~D~G~---~~p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~  177 (251)
                      ++|...++.+++..+....    .....+++...++.|+|+..   +|.++++++..  .++.+|++..+...+.+....
T Consensus         4 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~A~g~~~D~ta~~v~~~--~~~~~~~~~~~~~~~~~~~~~   81 (209)
T 3cpe_A            4 TLISGMKLAVMDFIEVTPDDHGFHQFKKPEPDRKYIATLDCSEGRGQDYHALHIIDV--TDDVWEQVGVLHSNTISHLIL   81 (209)
T ss_dssp             BSSCHHHHTTCCCCCCCCCSSSEEESSCCCTTCCEEEEEECCSSBTTBCEEEEEEEC--SSSSEEEEEEEEESSSCTTTH
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECC--CCCCEEEEEEEECCCCCHHHH
T ss_conf             056678887400222103478814556257888058885225557787426999325--787608999985588886889


Q ss_pred             HHHHHHCCCCCEEEECCCCCEECCCCCCCHHHHHHHCCCEE--E---ECCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
Q ss_conf             99998332487089726300111788888899999789747--7---6577777677758998999999860799078
Q 537021.9.peg.1  178 VAALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKM--L---PECATFDDGSNGVEAGISDMLDRMRSGRWKV  250 (251)
Q Consensus       178 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~r~~G~~~--~---~~~~~~~kg~~sV~~GI~~l~~~~~~grl~V  250 (251)
                      ++.|.+.....+   +....+.+++.|..+++.+++.+...  .   .........+++.+..|..|..++++|++++
T Consensus        82 ~~~i~~~~~~~~---~~~i~iE~~~~G~~~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~K~~ri~~l~~~~e~g~i~~  156 (209)
T 3cpe_A           82 PDIVMRYLVEYN---ECPVYIELNSTGVSVAKSLYMDLEYEGVICDSYTDLGMKQTKRTKAVGCSTLKDLIEKDKLII  156 (209)
T ss_dssp             HHHHHHHHHHTT---SCCEEEEESHHHHHHHHHHHTTSCCSCEECSSSSCSSEECCHHHHHHHHHHHHHHHHTTSEEC
T ss_pred             HHHHHHHHHHCC---CCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
T ss_conf             999999999728---838999989859999999988745576046666777873785629999999999997498798

Probab=97.62  E-value=0.00013  Score=43.94  Aligned_cols=119  Identities=8%  Similarity=-0.071  Sum_probs=76.3

Q ss_pred             CCCCCCCEEEEEECCCC---CCCCEEEEEEEECCCCEEEEEEEHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEECCCC
Q ss_conf             54656743575200377---487199999997739989999431025998799999998332487089726300111788
Q 537021.9.peg.1  127 LDIPEHWVQIGGMDFGW---HHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHDKRS  203 (251)
Q Consensus       127 ~~~~~~~~~~~g~D~G~---~~p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  203 (251)
                      ...++...+++|+|+..   +|.+|++++..+  ++.+|+++-+...+.+....++.+.+......   +....+.+++.
T Consensus        53 ~~~~~~~~~~~~~D~A~g~~~D~ta~~v~~~~--~~~~~~v~~~~~~~~~~~~~~~~i~~l~~~~~---~~~i~vE~~~~  127 (232)
T 3c6a_A           53 EKPKEGRKYVATLDCSEGRGQDYHALQIIDIT--EFPYKQVAVYHSNTTSHFILPDIVFKYLMMYN---ECPVYIELNST  127 (232)
T ss_dssp             SCCCTTCCEEEEEECCCSSSSCCEEEEEEECS--SSSEEEEEEEEESCCCTTTHHHHHHHHHHHTT---SCCEEEBCSHH
T ss_pred             ECCCCCCEEEEEEECCCCCCCCCCEEEEEEEC--CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC---CCEEEEEECCC
T ss_conf             25899984999997478768887889999924--88704899981457688899999999998715---66299996785


Q ss_pred             CCCHHHHHHHCCCEEE-----ECCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
Q ss_conf             8888999997897477-----6577777677758998999999860799078
Q 537021.9.peg.1  204 GEQLSAQYRRQGMKML-----PECATFDDGSNGVEAGISDMLDRMRSGRWKV  250 (251)
Q Consensus       204 ~~s~~e~~r~~G~~~~-----~~~~~~~kg~~sV~~GI~~l~~~~~~grl~V  250 (251)
                      |..+++.+++......     .........+++.+..|..+..++++|++.+
T Consensus       128 g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~K~~ri~~l~~~~e~g~i~i  179 (232)
T 3c6a_A          128 GVSIAKSLAMDLEYDNIICDSFIDLGMKQSKRSKAMGCSALKDLIEKDKLII  179 (232)
T ss_dssp             HHHHHHHHHHTSCCCCBCCSBTTBSSBCCCHHHHHHHHHHHHHHHHTTCEEC
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCEEE
T ss_conf             8999999989753773256555566743342009999999999997185498

Probab=96.69  E-value=0.029  Score=31.20  Aligned_cols=104  Identities=11%  Similarity=0.064  Sum_probs=67.4

Q ss_pred             CCCCHHHHCCCCCCEEEEECCCC---HHHHHHHHHH--HCCCCCEEEEEECCCCCCCHHHHHH--CCCCCCCEEEEEEEH
Q ss_conf             33696550333135899818989---7499886311--2475873999924899987565564--036799759999771
Q 537021.9.peg.1    4 YEQGRDKWQSNTVHYVWFDEEPP---EDVYFEGLTR--INATQGLVTLTLTPLKGRSPIIEHY--LSASSSDRQVIRMTI   76 (251)
Q Consensus         4 ~~q~~~~~~G~~~~~i~~DE~~~---~~~~~~~~~r--~~~~~g~i~~~~nP~~~~~~~~~~~--~~~~~~~~~~~~~t~   76 (251)
                      ..+.+..++|..++.+++||+..   ...+...+..  ...+...+.+++||... ..++..+  ..............+
T Consensus       117 ~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~~l~sTp~~~-~~~~~~~~~~~~~~~~~~~~~~~~  195 (238)
T 3cpe_A          117 YASSPDAVRGNSFAMIYIEDCAFIPNFHDSWLAIQPVISSGRRSKIIITTTPNGL-NHFYDIWTAAVEGKSGFEPYTAIW  195 (238)
T ss_dssp             EECCHHHHHHSCCSEEEEETGGGCTTHHHHHHHHHHHHSSSSCCEEEEEECCCTT-SHHHHHHHHHHTTCSSCEEEEECG
T ss_pred             CCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCC-CCHHHHHHHHHHCCCCCCCEECCC
T ss_conf             1688877667655405864122064056555310344436887269997899776-520688988742876567422442


Q ss_pred             HHCCCC----------CHHHHHHHHHCCCHHHHHHHHCCCCE
Q ss_conf             334668----------89999999870897356433005100
Q 537021.9.peg.1   77 NETPHY----------NEQERKRIIDSYPLHEREARTKGEPI  108 (251)
Q Consensus        77 ~DNp~l----------~~~~~~~~~~~~~~~~~~~~~~G~~~  108 (251)
                      .+.+..          ....++.....++++.++++++|.|.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (238)
T 3cpe_A          196 NSVKERLYNDEDIFDDGWQWSIQTINGSSLAQFRQEHTAAFE  237 (238)
T ss_dssp             GGSGGGGBCTTSBBCTTHHHHHHHHTTSCHHHHHHHHSCCCT
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCEEC
T ss_conf             336763455432100457899999845774442235441121