peg_789

 Score =  235 bits (600), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 119/143 (83%), Positives = 132/143 (92%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           MFVILALIVLVA+LNIIS LVMLV+E+RRDIAILRTMGARISSIM+IFFMIGAFIGI+GT
Sbjct: 274 MFVILALIVLVASLNIISGLVMLVKEKRRDIAILRTMGARISSIMAIFFMIGAFIGISGT 333

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
             G+I+GILIS NVE IR+FFL+  GVVIFDTEAYLLTELPSKISW+EVSWI++M + LS
Sbjct: 334 CAGVIIGILISVNVEVIRQFFLNAFGVVIFDTEAYLLTELPSKISWIEVSWIVAMTVFLS 393

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
           LLATIFPSWKASRIDPVK LR E
Sbjct: 394 LLATIFPSWKASRIDPVKALRYE 416

Species: Candidatus Liberibacter solanacearum
Genus: Candidatus Liberibacter
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  163 bits (413), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 82/143 (57%), Positives = 110/143 (76%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           MF+IL LIVLVAALNI+S L+MLV+++  DIAILRTMGA   S+M IFFM GA IG+AGT
Sbjct: 294 MFMILTLIVLVAALNIVSGLIMLVKDKGSDIAILRTMGATSGSVMRIFFMTGAAIGVAGT 353

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
             G+I+G+++  N+E+IR+FF    G  +F+ E Y L++LP+ ++  E   I+ MALALS
Sbjct: 354 IAGVILGVVVCLNIESIRQFFSWVSGTTLFNPELYFLSQLPADMNADETVSIVVMALALS 413

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
            LATIFP+W+ASR+DPV+ LR E
Sbjct: 414 FLATIFPAWRASRLDPVQALRYE 436

Species: Sinorhizobium fredii
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  161 bits (408), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/143 (57%), Positives = 109/143 (76%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           MF+IL LIVLVAALNIIS L+MLV+++  DIAILRTMGA   +IM IFFM GA IGI GT
Sbjct: 292 MFMILTLIVLVAALNIISGLIMLVKDKSSDIAILRTMGASAGAIMRIFFMTGAAIGIVGT 351

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
             G+++G+L+  N+E+IR+FF    G VIF+ + Y L++LP+++   E   I+ MAL LS
Sbjct: 352 VAGVLLGVLVCVNIESIRQFFSWISGTVIFNPQVYFLSQLPAEMQLSETISIVVMALTLS 411

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
            +ATIFP+W+ASR+DPV+ LR E
Sbjct: 412 FIATIFPAWRASRLDPVQALRYE 434

Species: Rhizobium leguminosarum
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  161 bits (408), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/143 (56%), Positives = 108/143 (75%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           MF+IL LIVLVAALNIIS L+MLV+++  DIAILRTMGA   S+M IFFM GA IG+ GT
Sbjct: 266 MFMILTLIVLVAALNIISGLIMLVKDKGSDIAILRTMGATSGSVMRIFFMTGAAIGVTGT 325

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
             G+ +G+++  N+E+IR+FF    G  +FD E Y L++LP+ ++  E   ++ MALALS
Sbjct: 326 IAGVALGVVVCLNIESIRQFFSWVSGATLFDPELYFLSQLPADMNADETVTVVVMALALS 385

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
            LATIFP+W+ASR+DPV+ LR E
Sbjct: 386 FLATIFPAWRASRLDPVQALRYE 408

Species: Sinorhizobium meliloti
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  161 bits (408), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 79/143 (55%), Positives = 110/143 (76%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           MF+IL LIVLVAALNIIS L+MLV+++  DIAILRTMGA   +I+ IF M GA IG+ GT
Sbjct: 286 MFMILTLIVLVAALNIISGLIMLVKDKGHDIAILRTMGASRGAILRIFLMTGAAIGVTGT 345

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
             G+++G+LI  N+E+IR+FF    G V+F+ E Y L++LP+K+   E ++++ MAL LS
Sbjct: 346 LAGVLLGVLICTNIESIRQFFSWMTGKVLFNPELYFLSQLPAKMDPRETTYVVLMALGLS 405

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
            LAT+FP+W+A+R+DPV+ LR E
Sbjct: 406 FLATVFPAWRAARLDPVEALRYE 428

Species: Mesorhizobium ciceri
Genus: Mesorhizobium
Family: Phyllobacteriaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  161 bits (408), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/143 (56%), Positives = 108/143 (75%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           MF+IL LIVLVAALNIIS L+MLV+++  DIAILRTMGA   S+M IFFM GA IG+ GT
Sbjct: 295 MFMILTLIVLVAALNIISGLIMLVKDKGSDIAILRTMGATSGSVMRIFFMTGAAIGVTGT 354

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
             G+ +G+++  N+E+IR+FF    G  +FD E Y L++LP+ ++  E   ++ MALALS
Sbjct: 355 IAGVALGVVVCLNIESIRQFFSWVSGATLFDPELYFLSQLPADMNADETVTVVVMALALS 414

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
            LATIFP+W+ASR+DPV+ LR E
Sbjct: 415 FLATIFPAWRASRLDPVQALRYE 437

Species: Sinorhizobium meliloti
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  161 bits (407), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 80/143 (55%), Positives = 110/143 (76%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           MF+IL LIVLVAALNIIS L+MLV+++  DIAILRTMGA   +IM IFFM GA IGI GT
Sbjct: 292 MFMILTLIVLVAALNIISGLIMLVKDKGSDIAILRTMGASAGAIMRIFFMTGAAIGIVGT 351

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
             G+++G+L+  N+E++R+FF    G V+F+ + Y L++LP+++   E   I++MAL LS
Sbjct: 352 VAGVLLGVLVCVNIESVRQFFSWISGTVLFNPQVYFLSQLPAEMDLSETISIVAMALTLS 411

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
            +ATIFP+W+ASR+DPV+ LR E
Sbjct: 412 FIATIFPAWRASRLDPVQALRYE 434

Species: Rhizobium leguminosarum
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  160 bits (406), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 82/143 (57%), Positives = 109/143 (76%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           MF+IL LIVLVAALNIIS L+MLV+++  DIAILRTMGA   +IM IFFM GA IGI GT
Sbjct: 279 MFMILTLIVLVAALNIISGLIMLVKDKGSDIAILRTMGASAGAIMRIFFMTGAAIGIVGT 338

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
             G+++G+L+  N+E+IR+FF    G VIF+ + Y L++LP+++   E   I+ MAL LS
Sbjct: 339 LAGVLLGVLVCVNIESIRQFFSWISGTVIFNPQVYFLSQLPAEMDLSETISIVVMALTLS 398

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
            +ATIFP+W+ASR+DPV+ LR E
Sbjct: 399 FIATIFPAWRASRLDPVQALRYE 421

Species: Rhizobium etli
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  160 bits (406), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 81/143 (56%), Positives = 109/143 (76%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           MF+IL LIVLVAALNIIS L+MLV+++  DIAILRTMGA   +IM IFFM GA IGI GT
Sbjct: 202 MFMILTLIVLVAALNIISGLIMLVKDKGSDIAILRTMGASAGAIMRIFFMTGAAIGIVGT 261

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
             G+++G+L+  N+E+IR+FF    G VIF+ + Y L++LP+++   E   ++ MAL LS
Sbjct: 262 IAGVLLGVLVCVNIESIRQFFSWISGTVIFNPQVYFLSQLPAEMDLSETISVVVMALTLS 321

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
            +ATIFP+W+ASR+DPV+ LR E
Sbjct: 322 FIATIFPAWRASRLDPVQALRYE 344

Species: Rhizobium etli
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  160 bits (405), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 79/143 (55%), Positives = 110/143 (76%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           MF+IL LIVLVAALNIIS L+MLV+++  DIAILRTMGA   +I+ IF M GA IG+ GT
Sbjct: 286 MFMILTLIVLVAALNIISGLIMLVKDKGHDIAILRTMGASRGAILRIFLMTGAAIGVTGT 345

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
             G+++G++I  N+E+IR+FF    G V+F+ E Y L++LP+K+   E +++I MAL LS
Sbjct: 346 LAGVLLGVVICTNIESIRQFFSWMTGKVLFNPELYFLSQLPAKMDPRETTYVIIMALGLS 405

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
            LAT+FP+W+A+R+DPV+ LR E
Sbjct: 406 FLATVFPAWRAARLDPVEALRYE 428

Species: Mesorhizobium opportunistum
Genus: Mesorhizobium
Family: Phyllobacteriaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  168 bits (427), Expect = 6e-43
 Identities = 68/143 (47%), Positives = 101/143 (70%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           MF+IL+LI+ VAA NI+S+LVM V++++ DIAILRT+GA    IM IF + G  IG+ GT
Sbjct: 269 MFLILSLIIAVAAFNIVSTLVMAVKDKQGDIAILRTLGATPGQIMRIFIVQGLLIGVIGT 328

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
            +G+I+G+L++ N+  I  F    +GV  F+ + Y L  LPSK+  ++V  II  AL LS
Sbjct: 329 LLGVILGVLLALNLTTIINFIEWLIGVKFFNADIYFLDFLPSKLDPLDVLLIIVTALLLS 388

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
           LLAT++P+W+A+++ P + LR E
Sbjct: 389 LLATLYPAWRAAKLQPAEALRYE 411

This model describes the LolC protein, and its paralog LolE found in some species. These proteins are homologous to permease proteins of ABC transporters. In some species, two paralogs occur, designated LolC and LolE. In others, a single form is found and tends to be designated LolC. Length = 411

 Score =  108 bits (271), Expect = 7e-25
 Identities = 54/142 (38%), Positives = 94/142 (66%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           M++ + L++ VA  NI+S+LVM V+++  DIAILRT+GA+   I +IF   G   G+ G+
Sbjct: 270 MYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAILRTLGAKDGLIRAIFVWYGLLAGLKGS 329

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
            +G+++G+++S N+  I K     +G      + Y +  LPS++ W++V +++  AL LS
Sbjct: 330 LIGVVIGVVVSLNLTPIIKGIEKLIGHQFLSGDIYFIDFLPSELHWLDVFYVLVTALVLS 389

Query: 121 LLATIFPSWKASRIDPVKVLRG 142
           LLA+ +P+ +AS++DP +VL G
Sbjct: 390 LLASWYPARRASKLDPARVLSG 411

Length = 412

 Score =  104 bits (262), Expect = 6e-24
 Identities = 47/143 (32%), Positives = 90/143 (62%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           M++ + L++ VA  NI+S+L+M V++++ DIAILRT+GA    I  IF   G   G+ G+
Sbjct: 269 MYLAMVLVIGVACFNIVSTLIMAVKDKQGDIAILRTLGANDGLIKRIFVWYGLQAGMKGS 328

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
            +G+++G++++ N+    +     +G      + Y +  LPS++ W++V  ++  ALALS
Sbjct: 329 LIGIVLGVIVALNLTTFIQGIEWVIGHQFLSGDIYFVDFLPSELHWLDVLMVLVTALALS 388

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
           L+A+ +P+ +A+++ P +VL   
Sbjct: 389 LMASWYPASRAAKLQPAQVLSSH 411

This protein is part of an unusual ABC transporter complex that releases lipoproteins from the periplasmic side of the bacterial inner membrane, rather than transport any substrate across the inner membrane. In some species, the permease-like transmembrane protein is represented by two paralogs, LolC and LolE, both in the LolCDE complex. This family consists of LolE, as found in E. coli and related species. Length = 411

 Score = 96.3 bits (240), Expect = 2e-21
 Identities = 54/143 (37%), Positives = 89/143 (62%), Gaps = 10/143 (6%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           M ++L+LIV VAA NII+SL +LV E++ ++AIL+T G     IM +F + GA  GI G 
Sbjct: 267 MGLLLSLIVAVAAFNIITSLGLLVMEKQGEVAILQTQGLTRRQIMMVFMVQGASAGIIGA 326

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
            +G ++G L++  +  +    +  +GV++ D  A     LP  I  ++V  I  +A+A++
Sbjct: 327 LLGALLGALLASQLNNL----MPIIGVLL-DGAA-----LPVAIEPLQVIVIALVAMAIA 376

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
           LL+T++PSW+A+   P + LR E
Sbjct: 377 LLSTLYPSWRAAATQPAEALRYE 399

Length = 399

 Score = 46.3 bits (110), Expect = 3e-06
 Identities = 30/136 (22%), Positives = 70/136 (51%), Gaps = 14/136 (10%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           + ++  L++L+A L +++ L + + ERRR+I IL+ +GA    I  +  +    +G+ G+
Sbjct: 53  LSLLAVLLLLLALLILLNLLSISIAERRREIGILKALGASKKQIFKLLLLEALLLGLIGS 112

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
            +G+++G L++               ++      +    LP  I  + +  ++ + L ++
Sbjct: 113 LLGLLLGFLLA--------------YLLSSAIGYFSGFSLPLVIDPIVILLVLLLILLIA 158

Query: 121 LLATIFPSWKASRIDP 136
           LLA++ P+ +  +I P
Sbjct: 159 LLASLLPARRILKISP 174

This is a family of predicted permeases and hypothetical transmembrane proteins. The lipoprotein-releasing system transmembrane protein lolC from Buchnera aphidicola has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both lolC and an ATP-binding cassette transporter-like protein from Streptococcus cristatus have been shown to require ATP. Length = 174

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 22/143 (15%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           +F  LAL  L+AA+ +   L   V +R R+I I   +GA+   ++ +    G  +  AG 
Sbjct: 683 LFAALAL--LLAAIGLYGVLAYSVAQRTREIGIRMALGAQRGDVLRLVLRQGLRLAAAGL 740

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
            +G+   + ++  + +     L   GV   D   +                  ++ LA++
Sbjct: 741 AIGLAAALALARLLAS----LLF--GVSPTDPLTFAAV--------------AALLLAVA 780

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
           LLA   P+ +A+R+DP+  LR E
Sbjct: 781 LLACYLPARRAARVDPMIALRAE 803

Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown. Length = 803

 Score = 36.7 bits (83), Expect = 0.002
 Identities = 37/143 (25%), Positives = 75/143 (52%), Gaps = 12/143 (8%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
              I  + ++V A+ I + L++ V ER R+I IL+ +GA    I+  F +    +G+ G 
Sbjct: 289 DKAIAVISLIVGAIGIYNILLVSVLERTREIGILKALGATRREILLQFLLEALILGLIGG 348

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
            +G+++G+ +S             L  ++     + L  LP  +S + +   + +AL + 
Sbjct: 349 LLGILLGLGLS------------LLLALLLIASLFFLLALPILLSPLLILLALIVALLVG 396

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
           ++A + P+ KA+++DP++ LR E
Sbjct: 397 VIAGLLPARKAAKLDPIEALRKE 419

Length = 419

 Score =  132 bits (333), Expect = 4e-32
 Identities = 67/143 (46%), Positives = 97/143 (67%), Gaps = 6/143 (4%)

Query: 1   MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGT 60
           MF+IL LI+LVAA NIISSL MLV+E+ R+IAILR MGA  S IM IF + G  IG+ G 
Sbjct: 272 MFIILVLIILVAAFNIISSLTMLVKEKTREIAILRAMGASPSHIMRIFLLQGLIIGLIGA 331

Query: 61  GMGMIVGILISCNVEAIRKFFLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALS 120
            +G+I+G+L++ N+ +I  F    LG          ++ LP ++S ++V  ++  AL LS
Sbjct: 332 LLGVILGVLLALNLNSIIIFIEPLLGHTFG------ISTLPIELSLLDVVLVLVFALLLS 385

Query: 121 LLATIFPSWKASRIDPVKVLRGE 143
           LLAT++P+ +AS++DP + LR E
Sbjct: 386 LLATLYPARRASKLDPAEALRYE 408

Length = 408

Probab=100.00  E-value=6.2e-42  Score=231.66  Aligned_cols=143  Identities=47%  Similarity=0.804  Sum_probs=141.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             98999999999999999999999999999999999807552222036888987653233456678875310000000012
Q 537021.9.peg.7    1 MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKF   80 (143)
Q Consensus         1 m~ii~~~i~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~   80 (143)
T Consensus       272 Mfl~L~LIi~VAaFNIvS~L~M~V~dK~~dIAILRT~Ga~~~~im~IF~~~G~~~G~~GtllG~i~Gv~~~lN~~~i~~~  351 (414)
T TIGR02212       272 MFLILSLIIAVAAFNIVSTLVMAVKDKQGDIAILRTLGATPGQIMRIFIVQGLLIGVIGTLLGVILGVLLALNLTTIINF  351 (414)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999788542034423752006665337987751111447879999999999999999999989999999


Q ss_pred             CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
Q ss_conf             000268513680022331057044069999999999999999999999998299999982187
Q 537021.9.peg.7   81 FLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALSLLATIFPSWKASRIDPVKVLRGE  143 (143)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k~~p~~~lr~e  143 (143)
T Consensus       352 ~e~~~G~~~l~~~iYf~~~LPs~l~~~dv~~i~~~al~LSllATlYPA~RAa~~~PA~aLRYE  414 (414)
T TIGR02212       352 IEWLIGVKFLNADIYFLDFLPSKLDPLDVLLIIVAALVLSLLATLYPAWRAAKLQPAEALRYE  414 (414)
T ss_pred             HHHHHCCEEECCCCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
T ss_conf             988749353142101101075201078899999999999999888899998602804650389

These proteins are homologous to permease proteins of ABC transporters. In some species, two paralogs occur, designated LolC and LolE. In others, a single form is found and tends to be designated LolC .; GO: 0006810 transport, 0009276 1-2nm peptidoglycan-based cell wall, 0016021 integral to membrane.

Probab=100.00  E-value=2.2e-37  Score=208.52  Aligned_cols=143  Identities=38%  Similarity=0.721  Sum_probs=134.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             98999999999999999999999999999999999807552222036888987653233456678875310000000012
Q 537021.9.peg.7    1 MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKF   80 (143)
Q Consensus         1 m~ii~~~i~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~   80 (143)
T Consensus       270 ~~~il~li~~va~fnIi~~l~m~V~eK~reIgiLkalG~~~~~I~~iFl~eg~~ig~~G~~~G~~lG~~l~~~l~~~~~~  349 (412)
T PRK11146        270 MYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAILRTLGAKDGLIRAIFVWYGLLAGLKGSLIGVVIGVVVSLNLTPIIKG  349 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999998887999999948998899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
Q ss_conf             000268513680022331057044069999999999999999999999998299999982187
Q 537021.9.peg.7   81 FLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALSLLATIFPSWKASRIDPVKVLRGE  143 (143)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k~~p~~~lr~e  143 (143)
T Consensus       350 ~~~~~~~~~~~~~iy~i~~lP~~i~~~~v~~i~~~~~i~~~las~~PA~rAa~l~P~eaLr~e  412 (412)
T PRK11146        350 IEKLIGHQFLSGDIYFIDFLPSELHWLDVAYVLVTALLLSLLASWYPARRASKLDPARVLSGQ  412 (412)
T ss_pred             HHHHHCCCCCCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
T ss_conf             999837555897520120355171399999999999999999999999999787999983599

Probab=100.00  E-value=2.4e-35  Score=198.17  Aligned_cols=143  Identities=35%  Similarity=0.666  Sum_probs=140.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             98999999999999999999999999999999999807552222036888987653233456678875310000000012
Q 537021.9.peg.7    1 MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKF   80 (143)
Q Consensus         1 m~ii~~~i~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~   80 (143)
T Consensus       274 MYlaMVLVIGVACFNIVSTL~MAVKDk~gdIAilRTlGA~dglIkrIFvWyGl~aG~~Gsl~G~v~Gv~vaLnLTt~I~g  353 (416)
T TIGR02213       274 MYLAMVLVIGVACFNIVSTLVMAVKDKAGDIAILRTLGAKDGLIKRIFVWYGLLAGLLGSLLGVVVGVVVALNLTTLIKG  353 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf             99988888655556467664531004776530210126576523202425547863546665443224534011147889


Q ss_pred             CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
Q ss_conf             000268513680022331057044069999999999999999999999998299999982187
Q 537021.9.peg.7   81 FLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALSLLATIFPSWKASRIDPVKVLRGE  143 (143)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k~~p~~~lr~e  143 (143)
T Consensus       354 iE~vIG~~fLSgDiYFvDFLPSeLhwlDVl~VlvtAl~LSl~AswYPA~RAakl~PA~VLSs~  416 (416)
T TIGR02213       354 IEKVIGHQFLSGDIYFVDFLPSELHWLDVLLVLVTALVLSLLASWYPASRAAKLKPARVLSSK  416 (416)
T ss_pred             HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC
T ss_conf             998824100124265673277302478888889999999999864367663037831112689

In some species, the permease-like transmembrane protein is represented by two paralogs, LolC and LolE, both in the LolCDE complex. This family consists of LolE, as found in Escherichia coli and related species.; GO: 0006810 transport, 0009276 1-2nm peptidoglycan-based cell wall, 0016021 integral to membrane.

Probab=100.00  E-value=8e-34  Score=190.38  Aligned_cols=137  Identities=49%  Similarity=0.801  Sum_probs=124.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             98999999999999999999999999999999999807552222036888987653233456678875310000000012
Q 537021.9.peg.7    1 MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKF   80 (143)
Q Consensus         1 m~ii~~~i~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~   80 (143)
T Consensus       272 m~~il~LIi~VA~fnI~ssL~m~V~ek~~eIAILrtmGa~~~~I~~iFl~~G~~iG~iG~llG~iLG~~~~~~i~~~~~~  351 (408)
T COG4591         272 MFIILVLIILVAAFNIISSLTMLVKEKTREIAILRAMGASPSHIMRIFLLQGLIIGLIGALLGVILGVLLALNLNSIIIF  351 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999999999999899889987664555789999829986789999999989999999999999999999998778740


Q ss_pred             CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
Q ss_conf             000268513680022331057044069999999999999999999999998299999982187
Q 537021.9.peg.7   81 FLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALSLLATIFPSWKASRIDPVKVLRGE  143 (143)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k~~p~~~lr~e  143 (143)
T Consensus       352 ~~~~~~~~------~~~~~lP~~~~~~di~~v~~~al~ls~lAtlyPA~rAskl~P~eaLr~e  408 (408)
T COG4591         352 IEPLLGHT------FGISTLPIELSLLDVVLVLVFALLLSLLATLYPARRASKLDPAEALRYE  408 (408)
T ss_pred             CCCCCCCE------ECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
T ss_conf             56534410------0112477350099999999999999999999788888668988885079

Probab=99.98  E-value=3e-32  Score=182.35  Aligned_cols=122  Identities=21%  Similarity=0.407  Sum_probs=104.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             99999999999999999999999999999999980755222203688898765323345667887531000000001200
Q 537021.9.peg.7    3 VILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKFFL   82 (143)
Q Consensus         3 ii~~~i~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~~~   82 (143)
T Consensus       527 ~Ia~ISLlVggIGImNIMlvSVtERTrEIGIRKAlGA~~~dI~~qFL~Ea~~l~~iGGiiGi~lg~~i~~~i~~~l~---  603 (648)
T PRK10535        527 LVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSLLIAFTLQLFLP---  603 (648)
T ss_pred             HHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_conf             99999999999999967322017888899999983898889999999999999999999999999999999998566---


Q ss_pred             CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
Q ss_conf             0268513680022331057044069999999999999999999999998299999982187
Q 537021.9.peg.7   83 HTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALSLLATIFPSWKASRIDPVKVLRGE  143 (143)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k~~p~~~lr~e  143 (143)
T Consensus       604 ----------------~~~~~~~~~~i~~a~~~s~~iGvlfGlyPA~kAArLdPIeALR~E  648 (648)
T PRK10535        604 ----------------GWEIGFSPLALLSAFLCSTVTGILFGWLPARNAARLDPVDALARE  648 (648)
T ss_pred             ----------------CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
T ss_conf             ----------------771426889999999999999999999999988778998982179

Probab=99.98  E-value=5.3e-32  Score=181.14  Aligned_cols=130  Identities=36%  Similarity=0.562  Sum_probs=116.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             98999999999999999999999999999999999807552222036888987653233456678875310000000012
Q 537021.9.peg.7    1 MFVILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKF   80 (143)
Q Consensus         1 m~ii~~~i~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~   80 (143)
T Consensus       267 ~~iIl~lIilVA~FnIi~~l~m~V~eK~~eI~iL~alGa~~~~I~~iFl~~g~~ig~~G~~~G~~lG~~l~~~~~~~~~-  345 (396)
T PRK10814        267 MGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGALLGAALGALLASQLNNLMP-  345 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf             9999999999999999999999999777689999983899355999999999999999999999999999999999985-


Q ss_pred             CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf             000268513680022331057044069999999999999999999999998299999982
Q 537021.9.peg.7   81 FLHTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALSLLATIFPSWKASRIDPVKVL  140 (143)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k~~p~~~l  140 (143)
T Consensus       346 ---------~~~~~~~~~~~Pv~i~~~~v~~v~~~~~~i~~la~~~PA~~Aa~l~PveaL  396 (396)
T PRK10814        346 ---------IIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL  396 (396)
T ss_pred             ---------HHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC
T ss_conf             ---------432323664356895299999999999999999999999999587956649

Probab=99.93  E-value=4.5e-25  Score=145.88  Aligned_cols=118  Identities=27%  Similarity=0.484  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             99999999999999999999999999999980755222203688898765323345667887531000000001200026
Q 537021.9.peg.7    6 ALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKFFLHTL   85 (143)
Q Consensus         6 ~~i~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~~~~~~   85 (143)
T Consensus       686 ~lailia~lGl~gl~~~~v~~R~kEIgIRkalGAs~~~I~~ll~~e~l~l~~ig~~ig~~la~~~~~~l~~~~------~  759 (803)
T TIGR03434       686 ALALLLAAIGLYGVLAYSVAQRTREIGIRMALGAQRGDVLRLVLRQGLRLAAAGLAIGLAAALALARLLASLL------F  759 (803)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------C
T ss_conf             9999999999999999999999999998274289888999999999999999999999999999999999871------6


Q ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
Q ss_conf             8513680022331057044069999999999999999999999998299999982187
Q 537021.9.peg.7   86 GVVIFDTEAYLLTELPSKISWVEVSWIISMALALSLLATIFPSWKASRIDPVKVLRGE  143 (143)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k~~p~~~lr~e  143 (143)
T Consensus       760 ~-------------~-~~~~~~~f~~~~~~~~~i~lla~~~pa~rAa~~nPv~aLr~E  803 (803)
T TIGR03434       760 G-------------V-SPTDPLTFAAVAALLLAVALLACYLPARRAARVDPMIALRAE  803 (803)
T ss_pred             C-------------C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
T ss_conf             6-------------8-877779999999999999999999999999853999896278

Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.

Probab=99.90  E-value=7.8e-23  Score=134.49  Aligned_cols=126  Identities=20%  Similarity=0.309  Sum_probs=101.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             99999999999999999999999999999999980755222203688898765323345667887531000000001200
Q 537021.9.peg.7    3 VILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKFFL   82 (143)
Q Consensus         3 ii~~~i~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~~~   82 (143)
T Consensus       276 ~~~~liLliA~iN~~NL~~ar~~~R~rEigirkalGA~r~ql~~q~l~Es~ll~~~a~~lgl~l~~~~~~~~~~~~~---  352 (803)
T TIGR03434       276 GAVGLVLLIACANVANLLLARAAARQREIAVRLALGAGRGRLVRQLLTESLLLALAGGALGLLLAYWGLRLLLALLP---  352 (803)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_conf             99999999999999999999999999999999997969899999999999999999999999999999999999742---


Q ss_pred             CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
Q ss_conf             026851368002233105704406999999999999999999999999829999998218
Q 537021.9.peg.7   83 HTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALSLLATIFPSWKASRIDPVKVLRG  142 (143)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k~~p~~~lr~  142 (143)
T Consensus       353 ~~~~~---------~--~~~~~~~~~l~~~~~~~l~~~llag~~PA~~~s~~~p~~~Lk~  401 (803)
T TIGR03434       353 ASLPR---------L--AEISLDGRVLLFALALSLLTGLLFGLAPALQATRSDLAEALKE  401 (803)
T ss_pred             HCCCC---------H--HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             20431---------1--0046678999999999999999999999999816788999875

Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.

Probab=99.86  E-value=5.2e-21  Score=125.21  Aligned_cols=129  Identities=28%  Similarity=0.507  Sum_probs=109.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             99999999999999999999999999999999980755222203688898765323345667887531000000001200
Q 537021.9.peg.7    3 VILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKFFL   82 (143)
Q Consensus         3 ii~~~i~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~~~   82 (143)
T Consensus       291 ~~~~~~~~v~~i~i~~~~~~~v~er~~eigi~ka~G~~~~~i~~~~~~e~~~~~~~g~~~g~~~~~~~~~~i~~~~~---  367 (419)
T COG0577         291 AIAVISLIVGAIGIYNILLVSVLERTREIGILKALGATRREILLQFLLEALILGLIGGLLGILLGLGLSLLLALLLI---  367 (419)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_conf             89999999999999999999999987889999970998487999999999999999999999999999999999987---


Q ss_pred             CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
Q ss_conf             0268513680022331057044069999999999999999999999998299999982187
Q 537021.9.peg.7   83 HTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALSLLATIFPSWKASRIDPVKVLRGE  143 (143)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k~~p~~~lr~e  143 (143)
T Consensus       368 ---~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~pa~~~~k~~~~~~l~~~  419 (419)
T COG0577         368 ---AS------LFFLLALPILLSPLLILLALIVALLVGVIAGLLPARKAAKLDPIEALRKE  419 (419)
T ss_pred             ---HH------HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             ---66------66566777752799999999999999999999999999876299996359

Probab=99.81  E-value=4e-19  Score=115.62  Aligned_cols=119  Identities=25%  Similarity=0.522  Sum_probs=100.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             99999999999999999999999999999999807552222036888987653233456678875310000000012000
Q 537021.9.peg.7    4 ILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKFFLH   83 (143)
Q Consensus         4 i~~~i~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~~~~   83 (143)
T Consensus        56 ~~~~~~~~~~~~i~~~~~~~i~~r~~ei~ilka~G~~~~~i~~~~~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~-----  130 (174)
T pfam02687        56 LAVLLLLLALLILLNLLSISIAERRREIGILKALGASKKQIFKLLLLEALLLGLIGSLLGLLLGFLLAYLLSSAI-----  130 (174)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_conf             999999999999999999999999999999999299999999999999999999999999999999999999999-----


Q ss_pred             CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf             26851368002233105704406999999999999999999999999829999
Q 537021.9.peg.7   84 TLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALSLLATIFPSWKASRIDP  136 (143)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k~~p  136 (143)
T Consensus       131 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (174)
T pfam02687       131 ---------GYFSGFSLPLVIDPIVILLVLLLILLIALLASLLPARRILKISP  174 (174)
T ss_pred             ---------HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             ---------98614343400189999999999999999999999999986998

This is a family of predicted permeases and hypothetical transmembrane proteins. The lipoprotein-releasing system transmembrane protein lolC from Buchnera aphidicola has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both lolC and an ATP-binding cassette transporter-like protein from Streptococcus cristatus have been shown to require ATP.

Probab=99.51  E-value=2.6e-13  Score=86.00  Aligned_cols=118  Identities=19%  Similarity=0.311  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             99999999999999999999999999980755222203688898765323345667887531000000001200026851
Q 537021.9.peg.7    9 VLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKFFLHTLGVV   88 (143)
Q Consensus         9 ~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~~~~~~~~~   88 (143)
T Consensus       190 ~~a~~liI~NTIRL~i~sRr~EI~ImkLVGAT~~FIr~PFl~eG~~~Gl~G~~la~~l~~~~~~~~~~~~~~l~~ly~--  267 (309)
T PRK11026        190 VAAVFLVIGNSVRLSIFSRRDTINVMKLIGATDGFILRPFLYGGALLGFSGALLSLILSEILVLYLSSAVKYVADVFG--  267 (309)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_conf             999999999999999998799999999938887889760999999999999999999999999999989999999836--


Q ss_pred             CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCH
Q ss_conf             368002233105704406999999999999999999999999829-999
Q 537021.9.peg.7   89 IFDTEAYLLTELPSKISWVEVSWIISMALALSLLATIFPSWKASR-IDP  136 (143)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k-~~p  136 (143)
T Consensus       268 --------~~~~l~~~~~~~~~~ll~~g~~lG~lgS~~sv~r~Lr~i~p  308 (309)
T PRK11026        268 --------TKFDLNGLSFDECLLLLLVCSMIGWIAAWLATVQHLRHFTP  308 (309)
T ss_pred             --------CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             --------43202344199999999999999999999999999875599

Probab=99.19  E-value=5e-11  Score=74.40  Aligned_cols=110  Identities=15%  Similarity=0.263  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999999999999999999999999807552222036888987653233456678875310000000012000268513
Q 537021.9.peg.7   10 LVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKFFLHTLGVVI   89 (143)
Q Consensus        10 ~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~~~~~~~~~~   89 (143)
T Consensus       271 IVGTVIVYQILYT~V~DHL~EYATLKAIGY~~~YLLGV~lQEALLLA~~GyLP~~~l~i~LY------~-----------  333 (381)
T TIGR01185       271 IVGTVIVYQILYTEVADHLSEYATLKAIGYTDKYLLGVVLQEALLLAVLGYLPSFVLAILLY------T-----------  333 (381)
T ss_pred             HEEEHEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------H-----------
T ss_conf             10101032013421431001245653203442246788999999999987516899999998------7-----------


Q ss_pred             CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
Q ss_conf             68002233105704406999999999999999999999999829999998
Q 537021.9.peg.7   90 FDTEAYLLTELPSKISWVEVSWIISMALALSLLATIFPSWKASRIDPVKV  139 (143)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k~~p~~~  139 (143)
T Consensus       334 ---~~~~AT~LP~~M~~~RA~TVLIlT~~MC~~SG~IAV~~LR~ADPADI  380 (381)
T TIGR01185       334 ---TARRATLLPLIMSYDRALTVLILTIIMCFVSGAIAVRKLRAADPADI  380 (381)
T ss_pred             ---HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             ---65776237147566789999999999997757888644206874457

ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain . The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyze ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarize the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site , , . The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis , , , , , . Proteins known to belong to this family are classified in several functional subfamilies depending on the substrate used (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This family contains a predicted membrane subunit, DevC, of an ABC transporter known so far from two species of cyanobacteria. Some experimental data from mutational analysis { suggest that this protein, along with DevA and DevB encoded in the same operon, may be involved in the transport/export of glycolipids.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane.

Probab=99.15  E-value=5.4e-10  Score=69.17  Aligned_cols=119  Identities=22%  Similarity=0.380  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             99999999999999999999999999999807552222036888987653233456678875310000000012000268
Q 537021.9.peg.7    7 LIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKFFLHTLG   86 (143)
Q Consensus         7 ~i~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~~~~~~~   86 (143)
T Consensus       263 ~all~agv~VA~A~~~Y~~~r~~~iA~lK~LGA~~~~~~~l~l~Qil~v~~lgiaiG~vlG~l~~~~l~~~L~~~---LP  339 (829)
T COG3127         263 LALLLAGVAVANAVRHYLDSRYDAIAILKCLGASRGQLRLLYLLQILMVLLLGIAIGLVLGALAPLVLMALLASL---LP  339 (829)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CC
T ss_conf             999999999999999997235248999997177566899999999999999999999999998899999984101---78


Q ss_pred             CCCCCHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
Q ss_conf             513680022331057-0440699999999999999999999999982999999821
Q 537021.9.peg.7   87 VVIFDTEAYLLTELP-SKISWVEVSWIISMALALSLLATIFPSWKASRIDPVKVLR  141 (143)
Q Consensus        87 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k~~p~~~lr  141 (143)
T Consensus       340 v~-----------~p~~~l~P~~--~alAa~fl~~l~fal~PL~rl~~vpp~av~R  382 (829)
T COG3127         340 VP-----------LPAGGLWPWA--LALAALFLIALAFALLPLGRLRRVPPLAVLR  382 (829)
T ss_pred             CC-----------CCCCCCCHHH--HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf             88-----------7766633589--9999999999996100068762588188873

Probab=98.94  E-value=5.9e-09  Score=63.87  Aligned_cols=119  Identities=16%  Similarity=0.257  Sum_probs=91.2

Q ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             99999999999-99999999999999999999807552222036888987653233456678875310000000012000
Q 537021.9.peg.7    5 LALIVLVAALN-IISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKFFLH   83 (143)
Q Consensus         5 ~~~i~~i~~~~-i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~~~~   83 (143)
T Consensus       189 ~~vlm~~AvfLVigNsiRl~i~srr~~I~v~KLlGAtd~FIlRPfLY~gm~~~~~galvslils~~l~s~~~saV~~v~~  268 (314)
T TIGR00439       189 LSVLMGIAVFLVIGNSIRLDILSRRESIEVTKLLGATDSFILRPFLYQGMLLSLLGALVSLILSEFLVSALRSAVDAVAK  268 (314)
T ss_pred             HHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999988778612113332321102000012117982211121579999999999999999999999976288998642


Q ss_pred             CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             26851368002233105704406999999999999999999999999829
Q 537021.9.peg.7   84 TLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALSLLATIFPSWKASR  133 (143)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k  133 (143)
T Consensus       269 ~fg~~f~~~g----------l~vgE~~lll~~~~~~G~vgAWlAttqHl~  308 (314)
T TIGR00439       269 VFGLKFDLNG----------LSVGELVLLLVVCIILGYVGAWLATTQHLL  308 (314)
T ss_pred             HHHHEEECCC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             4300210131----------006789999999999999999999999997

FtsE is a hydrophilic nucleotide-binding protein that associates with the inner membrane by means of association with FtsX; FtsE mutants are viable only in high salt, supporting possible roles in cell division, as previously indicated, or in transport.; GO: 0007049 cell cycle, 0016021 integral to membrane.

Probab=98.73  E-value=2.4e-07  Score=55.68  Aligned_cols=113  Identities=20%  Similarity=0.264  Sum_probs=78.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             99999999999999999999999999999807552222036888987653233456678875310000000012000268
Q 537021.9.peg.7    7 LIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKFFLHTLG   86 (143)
Q Consensus         7 ~i~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~~~~~~~   86 (143)
T Consensus       714 ~~l~AgvLvL~~alaag~r~R~~eavvlrtLGAtr~~l~~t~~~Ey~llGlvagl~A~~~~~aa~w~v~~~v------f-  786 (829)
T COG3127         714 LALAAGVLVLAAALAAGNRARVQEAVVLRTLGATRALLRTTLWAEYALLGLVAGLVAAIGAEAAAWVLVAKV------F-  786 (829)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------H-
T ss_conf             999999999999998757888888899998301089999999999999999999999985458999999998------5-


Q ss_pred             CCCCCHHHHHHHCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
Q ss_conf             51368002233105704406999--999999999999999999999829999998218
Q 537021.9.peg.7   87 VVIFDTEAYLLTELPSKISWVEV--SWIISMALALSLLATIFPSWKASRIDPVKVLRG  142 (143)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~pa~~~~k~~p~~~lr~  142 (143)
T Consensus       787 ------------~lp~~pd~al~~~v~~l~~~~g~~l~G~----w~vl~~k~a~vlR~  828 (829)
T COG3127         787 ------------DLPWSPDWALWTIVLALVGAVGLGLAGG----WLVLGQKAAPVLRQ  828 (829)
T ss_pred             ------------CCCCCCCHHHHHHHHHHHHHHHHHHHHH----HHHHCCCCCHHHCC
T ss_conf             ------------5889875689999999999999998778----99853665053205

Probab=99.19  E-value=3.5e-10  Score=70.10  Aligned_cols=66  Identities=29%  Similarity=0.468  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999999999999999999998075522220368889876532334566788753
Q 537021.9.peg.7    4 ILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGIL   69 (143)
Q Consensus         4 i~~~i~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~   69 (143)
T Consensus       173 ~~~ll~~~~vllI~NtiR~~i~sRr~eIeVmklvGAt~~fI~~PFl~~g~~~gl~Ga~~~~~l~~~  238 (297)
T COG2177         173 LSILLALAAVLLIGNTIRLAIFSRRREIEVMKLVGATDSFIRRPFLYEGMLIGLLGALIALALAAL  238 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999953237999998264118887199999999999999999999999

Probab=92.08  E-value=0.31  Score=24.57  Aligned_cols=49  Identities=12%  Similarity=0.356  Sum_probs=38.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999998075522220368889876532334566788
Q 537021.9.peg.7   18 SSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIV   66 (143)
Q Consensus        18 ~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~l   66 (143)
T Consensus        74 ~l~~l~~L~~~sEl~vl~A~GvS~~~li~p~l~~al~~~~l~~~~~~~l  122 (364)
T COG0795          74 ALLTLGRLSRESELVVLRASGVSLKRLLRPVLILALLLSLLSFVLGLWL  122 (364)
T ss_pred             HHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf             9999999750371999988289889999999999999999999983843

Probab=90.81  E-value=0.77  Score=22.58  Aligned_cols=49  Identities=10%  Similarity=0.236  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999998075522220368889876532334566788
Q 537021.9.peg.7   18 SSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIV   66 (143)
Q Consensus        18 ~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~l   66 (143)
T Consensus        68 ~l~~~~~L~~~~El~a~~a~GiS~~~i~~p~l~~~~~~~~~~~~~~~~v  116 (353)
T pfam03739        68 VLLTLGRLARDSELTALRAAGISLKRLLRPVLILALLLSLLSFLLSEYL  116 (353)
T ss_pred             HHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_conf             9999999984264899998389906678999999999999999985403

Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this.