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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


Keyword search


Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

X: LuxS, MPP, ThrRS/AlaRS common domain

looks like an elaborated ferredoxin

X: Ribosomal protein L5
H: Ribosomal protein L5
T: Ribosomal protein L5
F: Ribosomal_L5,Ribosomal_L5_C

PF00281 PF00673

Representatives:

e1iq4A1[A:1-179] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L5 ; X-RAY DIFFRACTION 1.8Å

e8fmwAG1[AG:1-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e7pktd1[d:35-110,d:131-195] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5m ; ELECTRON MICROSCOPY

e6xywAe1[Ae:3-62,Ae:94-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L5, mitochondrial ; ELECTRON MICROSCOPY

e8fn2G1[G:1-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ovaBL1[BL:14-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11, putative ; ELECTRON MICROSCOPY

e8oveBL1[BL:13-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11, putative ; ELECTRON MICROSCOPY

e8cdlNN1[NN:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e8cdrNN1[NN:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e8cehNN1[NN:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e8cf5NN1[NN:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e8cg8NN1[NN:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e8cgnNN1[NN:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e8civNN1[NN:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e8ckuNN1[NN:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e8cmjNN1[NN:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e8evpAJ1[AJ:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8evqAJ1[AJ:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8evrAJ1[AJ:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8evsAJ1[AJ:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8evtAJ1[AJ:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ewbAJ1[AJ:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ewcAJ1[AJ:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ev62G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: MG ; X-RAY DIFFRACTION 2.946Å

e8ev71G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: MG ; X-RAY DIFFRACTION 2.890Å

e8ev72G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: MG ; X-RAY DIFFRACTION 2.890Å

e8fc12G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ARG,MG ; X-RAY DIFFRACTION 2.500Å

e8fc21G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ARG,MG ; X-RAY DIFFRACTION 2.500Å

e8fc22G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ARG,MG ; X-RAY DIFFRACTION 2.500Å

e8fc31G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ARG,MG ; X-RAY DIFFRACTION 2.600Å

e8fc32G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ARG,MG ; X-RAY DIFFRACTION 2.600Å

e8fc42G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ARG,MG ; X-RAY DIFFRACTION 2.450Å

e8fc51G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ARG,MG ; X-RAY DIFFRACTION 2.650Å

e8fc52G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ARG,MG ; X-RAY DIFFRACTION 2.650Å

e8fc61G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ARG,MG ; X-RAY DIFFRACTION 2.350Å

e8fc62G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ARG,MG ; X-RAY DIFFRACTION 2.350Å

e8t8b2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ARG,MG ; X-RAY DIFFRACTION 2.650Å

e8t8c1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ARG,MG ; X-RAY DIFFRACTION 2.600Å

e8t8c2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ARG,MG ; X-RAY DIFFRACTION 2.600Å

e8pv1LJ1[LJ:5-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8pv2LJ1[LJ:5-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8pv3LJ1[LJ:5-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8pv4LJ1[LJ:5-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8pv5LJ1[LJ:5-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8pv6LJ1[LJ:6-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8pv7LJ1[LJ:5-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8hkvAL5P1[AL5P:8-175] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e8hkzAL5P1[AL5P:8-175] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8hl3AL5P1[AL5P:8-175] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e8hl4AL5P1[AL5P:8-175] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e8p60LJ01[LJ0:4-102,LJ0:122-170] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8p60KJ01[KJ0:4-102,KJ0:122-170] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8bgeD1[D:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8bghD1[D:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8bh4D1[D:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8bhjD1[D:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8bhlD1[D:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8bhnD1[D:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8bhpD1[D:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8bilD1[D:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8bimD1[D:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8emmf1[f:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8pvaf1[f:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Large ribosomal subunit protein uL5 ; ELECTRON MICROSCOPY

e7y7df1[f:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e7y7ef1[f:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e7y7ff1[f:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e7y7gf1[f:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e7y7hf1[f:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fl2L51[L5:9-107,L5:127-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fl3L51[L5:9-107,L5:127-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fl4L51[L5:9-107,L5:127-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fl6L51[L5:9-107,L5:127-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fl7L51[L5:9-107,L5:127-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fl9L51[L5:9-107,L5:127-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8flaL51[L5:9-107,L5:127-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8flbL51[L5:9-107,L5:127-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8flcL51[L5:9-107,L5:127-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fldL51[L5:9-107,L5:127-176] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

; ELECTRON MICROSCOPY

e8fleL51[L5:9-107,L5:127-176] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

; ELECTRON MICROSCOPY

e8flfL51[L5:9-107,L5:127-176] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

; ELECTRON MICROSCOPY

e8idyN1[N:14-107,N:127-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ie3T1[T:14-107,T:127-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ineN1[N:14-107,N:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8infN1[N:14-107,N:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8inkC1[C:14-107,C:127-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ipdC1[C:14-107,C:127-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ipxC1[C:14-107,C:127-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ipyC1[C:14-107,C:127-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ir1A1[A:14-107,A:127-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ir3A1[A:14-107,A:127-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e4wweE1[E:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4wwtE1[E:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3j92J1[J:9-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 ; ELECTRON MICROSCOPY

e4wpoAG1[AG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e4wpoCG1[CG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e4wqfAG1[AG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.790Å

e4wqfCG1[CG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.790Å

e4wquAG1[AG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e4wquCG1[CG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e4wqyAG1[AG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e4wqyCG1[CG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e4xejAL051[AL05:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.8Å

e5kcr1G1[1G:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5kcs1G1[1G:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e2vhnF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2qaoF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2z4lF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2qbiF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2qoxF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2j01G1[G:4-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2i2vF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3bbxF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e2qozF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1iq4B1[B:1-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L5 ; X-RAY DIFFRACTION 1.8Å

e2qp1F1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2zjpD1[D:3-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L5 ; X-RAY DIFFRACTION 3.700Å

e2zjrD1[D:3-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L5 ; X-RAY DIFFRACTION 2.91Å

e2qbeF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3dllD1[D:3-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.5Å

e1xbpD1[D:3-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L5 ; X-RAY DIFFRACTION 3.5Å

e2zjqD1[D:3-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L5 ; X-RAY DIFFRACTION 3.3Å

e2i2tF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2gyaD1[D:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2qbgF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3df2F1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2qbaF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2gycD1[D:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2qbkF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3df4F1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2hgqG1[G:4-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2qovF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3cf5D1[D:3-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L5 ; X-RAY DIFFRACTION 3.300Å

e2awbF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2j03G1[G:4-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1mjiA1[A:4-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

50S RIBOSOMAL PROTEIN L5 ; ligands: MG ; X-RAY DIFFRACTION 2.5Å

e2rdoF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e2qbcF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2j28F1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L5 ; ELECTRON MICROSCOPY

e2z4nF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1vs6F1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2hguG1[G:4-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1mjiB1[B:4-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

50S RIBOSOMAL PROTEIN L5 ; ligands: MG ; X-RAY DIFFRACTION 2.5Å

e2hgjG1[G:4-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1vs8F1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2vhmF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2aw4F1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2qamF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wdiG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3zvpG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3pioD1[D:3-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.2473Å

e1vt2F1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3uxqG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3uyeG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4absG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3v23G1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3sgfF1[F:0-177] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3j0tG1[G:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3j19F1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4garF1[F:0-177] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1vsaE1[E:3-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3bboH1[H:18-192] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4g5lG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4io9D1[D:3-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L5 ; X-RAY DIFFRACTION 3.2Å

e3v6wG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3zn9G1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3j37G1[G:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1sm1D1[D:2-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L5 ; X-RAY DIFFRACTION 3.42Å

e1vorG1[G:2-179] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1vouG1[G:2-179] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1vowG1[G:2-179] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1voyG1[G:2-179] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1vp0G1[G:2-179] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2v47G1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2v49G1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3d5bG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3d5dG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3f1fG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3f1hG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3finG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wdjG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wdlG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wdnG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wh2G1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wh4G1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3fikF1[F:1-178] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e1vspE1[E:3-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3huxG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3huzG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wrjG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wrlG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wroG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2wrrG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3kirG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3kitG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3kiwG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3kiyG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3kniG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3knkG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3knmG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

; ligands: MG

e3knoG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3i8fG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

Next

e1vqoD1[D:10-107,D:128-174] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L5P ; ligands: CL,NA ; X-RAY DIFFRACTION 2.2Å

e1vw4E1[E:19-292] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

X: ClpS-like

contains a HTH motif

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes