F-group (family)

2003.2.1.1 Molybdopterin

Open in classification tree →Pfam PF00384 →

Ligands and drugs

1,389

Member domains

433

with ligand contacts (≤ 4 Å)

31.2% of members

351

with DrugDomain annotations

25.3% of members

143

with a DrugBank compound

10.3% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 2003.2.1.1 belongs to X-group 2003 Rossmann-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 78% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBank	PDB ligand	Name	Domains
DB18509	AST	Arsenite ion	12
DB03317	HEC	Ferroheme C	11
DB02078	PG5	Triglyme	8
DB02453	SBO	Antimonous acid	8
DB03328	MOS	Dioxo(sulfanyl)molybdenum	4
DB00157	NAI	NADH	3
DB03138	LCP	Perchlorate	3
DB04137	GTP	Guanosine-5'-Triphosphate	3
DB12529	NO2	Nitrite	2
DB16426	SO2	Sulfur dioxide	2
DB04315	GDP	Guanosine-5'-Diphosphate	1

Most frequently bound compounds

PDB ligand	Name	Domains in contact
MGD	2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE	338
4MOmetal	MOLYBDENUM(IV) ION	120
MOmetal	MOLYBDENUM ATOM	118
SF4	IRON/SULFUR CLUSTER	112
O	OXYGEN ATOM	84
CAmetal	CALCIUM ION	67
MD1	PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3,4,5,6,-TETRAHYDRO-PTERIDIN-6-YL)-2-HYDROXY-3,4-DIMERCAPTO-BUT-3-EN-YL ESTER GUANYLATE ESTER	56
F3S	FE3-S4 CLUSTER	40
H2S	HYDROSULFURIC ACID	39
Wmetal	TUNGSTEN ION	36
PGD	2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE	32
6MOmetal	MOLYBDENUM(VI) ION	30
BTT	BENZENE-1,2,4,5-TETROL	24
PYG	BENZENE-1,2,3-TRIOL	24
UNX	UNKNOWN ATOM OR ION	18
2MO	MOLYBDENUM (IV)OXIDE	14
ART	ARSENATE	12
AST	ARSENITE	12
NAmetal	SODIUM ION	8
PG5	1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE	8