F-group (family)
2004.1.1.44 PRK
Ligands and drugs
700
Member domains
137
with ligand contacts (≤ 4 Å)
19.6% of members
130
with DrugDomain annotations
18.6% of members
122
with a DrugBank compound
17.4% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2004.1.1.44 belongs to X-group 2004 P-loop domains-like, which binds 7.5 ligand superclasses per 20 proteins, narrower than 53% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB16833 | ADP | Adenosine disphosphate | 35 |
| DB01783 | PAU | Pantothenic acid | 9 |
| DB02097 | CTN | Cytidine | 6 |
| DB03403 | C5P | Cytidine-5'-Monophosphate | 6 |
| DB03909 | ACP | Adenosine-5'-[Beta, Gamma-Methylene]Triphosphate | 6 |
| DB01992 | COA | Coenzyme A | 5 |
| DB04315 | GDP | Guanosine-5'-Diphosphate | 3 |
| DB02431 | CTP | Cytidine-5'-Triphosphate | 2 |
| DB03725 | GCP | 5'-Guanylylmethylenebisphosphonate | 2 |
| DB04005 | UTP | Uridine 5'-triphosphate | 2 |
| DB16966 | PAZ | Phosphopantothenic acid | 2 |
| DB00171 | ATP | ATP | 1 |
| DB01632 | — | 5-O-phosphono-alpha-D-ribofuranosyl diphosphate | 1 |
| DB02007 | G6P | alpha-D-glucose 6-phosphate | 1 |
| DB03685 | — | Uridine monophosphate | 1 |
| DB04447 | DTT | 1,4-Dithiothreitol | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ADP | ADENOSINE-5'-DIPHOSPHATE | 39 |
| MGmetal | MAGNESIUM ION | 16 |
| UNX | UNKNOWN ATOM OR ION | 15 |
| NAmetal | SODIUM ION | 9 |
| PAU | PANTOTHENOIC ACID | 9 |
| ACP | PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | 7 |
| PN4 | (2R)-2,4-dihydroxy-3,3-dimethyl-N-[3-oxo-3-(pentylamino)propyl]butanamide | 7 |
| C5P | CYTIDINE-5'-MONOPHOSPHATE | 6 |
| CTN | 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE | 6 |
| 0JR | (2R)-2,4-dihydroxy-3,3-dimethyl-N-{3-oxo-3-[(pyridin-3-ylmethyl)amino]propyl}butanamide | 5 |
| ANP | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | 5 |
| COA | COENZYME A | 5 |
| AQX | N-(4-bromophenyl)-2-{[1-(4-fluorophenyl)-4-oxo-4,5-dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl]sulfanyl}acetamide | 4 |
| COK | [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL(3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGENDIPHOSPHATE | 4 |
| RUB | RIBULOSE-1,5-DIPHOSPHATE | 4 |
| CL | CHLORIDE ION | 3 |
| GDP | GUANOSINE-5'-DIPHOSPHATE | 3 |
| P6D | 2'-azidocytidine | 3 |
| UZ0 | 2'-azido-2'-deoxyuridine | 3 |
| CTP | CYTIDINE-5'-TRIPHOSPHATE | 2 |