F-group (family)
2004.1.2.2 PEPCK_ATP
Ligands and drugs
337
Member domains
38
with ligand contacts (≤ 4 Å)
11.3% of members
37
with DrugDomain annotations
11.0% of members
33
with a DrugBank compound
9.8% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2004.1.2.2 belongs to X-group 2004 P-loop domains-like, which binds 7.5 ligand superclasses per 20 proteins, narrower than 53% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00171 | ATP | ATP | 21 |
| DB00119 | PYR | Pyruvic acid | 5 |
| DB09157 | CO2 | Carbon dioxide | 3 |
| DB02637 | OAA | Oxaloacetate Ion | 2 |
| DB03902 | OXD | Oxalic Acid | 2 |
| DB16833 | ADP | Adenosine disphosphate | 2 |
| DB03345 | BME | Mercaptoethanol | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 22 |
| MGmetal | MAGNESIUM ION | 17 |
| MNmetal | MANGANESE (II) ION | 13 |
| CAmetal | CALCIUM ION | 12 |
| THJ | THIOSULFATE | 6 |
| PYR | PYRUVIC ACID | 5 |
| CO2 | CARBON DIOXIDE | 3 |
| 03S | methanesulfonic acid | 2 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 2 |
| AF3 | ALUMINUM FLUORIDE | 2 |
| OAA | OXALOACETATE ION | 2 |
| OXD | OXALIC ACID | 2 |
| BME | BETA-MERCAPTOETHANOL | 1 |
| CL | CHLORIDE ION | 1 |
| NAmetal | SODIUM ION | 1 |
| XE | XENON | 1 |