ECOD
F-group (family)

2484.1.1.12 Acetate_kinase

Open in classification tree →Pfam PF00871 →

Ligands and drugs

860
Member domains
94
with ligand contacts (≤ 4 Å)
10.9% of members
88
with DrugDomain annotations
10.2% of members
65
with a DrugBank compound
7.6% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 2484.1.1.12 belongs to X-group 2484 Ribonuclease H-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB16833ADPAdenosine disphosphate10
DB00131AMPAdenosine phosphate6
DB03766PPIPropanoic acid6
DB00139SINSuccinic acid2
DB00171ATPATP2
DB02423PISThiopyrophosphate2
DB02431CTPCytidine-5'-Triphosphate2
DB02596APCalpha,beta-Methyleneadenosine 5'-triphosphate2
DB04137GTPGuanosine-5'-Triphosphate2
DB019725GPGuanosine-5'-Monophosphate1
DB03403C5PCytidine-5'-Monophosphate1
DB03909ACPAdenosine-5'-[Beta, Gamma-Methylene]Triphosphate1
DB04315GDPGuanosine-5'-Diphosphate1

Most frequently bound compounds

PDB ligandNameDomains in contact
ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER20
ADPADENOSINE-5'-DIPHOSPHATE8
AMPADENOSINE MONOPHOSPHATE6
PPIPROPANOIC ACID6
NAmetalSODIUM ION5
B4PBIS(ADENOSINE)-5'-TETRAPHOSPHATE4
AF3ALUMINUM FLUORIDE2
APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER2
AQPADENOSINE-5'-TETRAPHOSPHATE2
ATPADENOSINE-5'-TRIPHOSPHATE2
CTPCYTIDINE-5'-TRIPHOSPHATE2
GTPGUANOSINE-5'-TRIPHOSPHATE2
PISTRIHYDROGEN THIODIPHOSPHATE2
SINSUCCINIC ACID2
5GPGUANOSINE-5'-MONOPHOSPHATE1
ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER1
C5PCYTIDINE-5'-MONOPHOSPHATE1
GDPGUANOSINE-5'-DIPHOSPHATE1
MNmetalMANGANESE (II) ION1