O75351 VPS4B_HUMAN
Gene name: VPS4B
Protein name: Vacuolar protein sorting-associated protein 4B
List of terms from Generic GO subset, which this protein is a part of:
- biological process involved in symbiotic interaction GO:0044403
- catabolic process GO:0009056
- cell cycle GO:0007049
- cell death GO:0008219
- cell division GO:0051301
- cellular component assembly GO:0022607
- chromosome organization GO:0051276
- chromosome segregation GO:0007059
- cytoskeleton organization GO:0007010
- membrane organization GO:0061024
- mitotic cell cycle GO:0000278
- mitotic nuclear division GO:0140014
- protein transport GO:0015031
- transport GO:0006810
- vesicle-mediated transport GO:0016192
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | O14604 | TMSB4Y | 0.75087 | cellular component assembly GO:0022607 cytoskeleton organization GO:0007010 protein-containing complex assembly GO:0065003 |
| 2 | O14818 | PSMA7 | 0.7426 | anatomical structure development GO:0048856 biological process involved in symbiotic interaction GO:0044403 biosynthetic process GO:0009058 ... |
| 3 | Q9BYD6 | MRPL1 | 0.74013 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ribosome biogenesis GO:0042254 ... |
| 4 | P61081 | UBE2M | 0.72327 | cell death GO:0008219 cellular protein modification process GO:0006464 |
| 5 | Q5FWF6 | ZNF789 | 0.72018 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 |
| 6 | P62328 | TMSB4X | 0.71309 | biosynthetic process GO:0009058 cellular component assembly GO:0022607 cellular nitrogen compound metabolic process GO:0034641 ... |
| 7 | Q14331 | FRG1 | 0.69936 | anatomical structure development GO:0048856 cellular nitrogen compound metabolic process GO:0034641 mRNA processing GO:0006397 ... |
| 8 | P46721 | SLCO1A2 | 0.69582 | transport GO:0006810 |
| 9 | Q05901 | CHRNB3 | 0.69086 | cell-cell signaling GO:0007267 nervous system process GO:0050877 signal transduction GO:0007165 ... |
| 10 | Q6IPR3 | TYW3 | 0.67828 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 |
20 40 60 80 100 AA: MSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGN STMI: DO_DISOPRED3: DDDDD..................................................DDDDDDD......DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDD.DDDDD..............................................DDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDD............................................................DD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDD...............................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .................................................................................................... RICH_[D]: Dekgn RICH_[K]: KlKeylKnKeKKaqKpvKegqpspadeK RICH_[DG]: GqpspaDekGn RICH_[EG]: EGqpspadEkGn RICH_[EK]: EKlKEylKnKEKKaqKpvKE RICH_fLPS_[D]: Dekgn RICH_fLPS_[K]: aeKlKeylKnKeKKaqKpvK
120 140 160 180 200 AA: DSDGEGESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSIS STMI: DO_DISOPRED3: DDDDDDDDDD.......................................................................................... DO_IUPRED2A: DDDDDDDDDDDDDDD.D.DD...............................................................DD............... DO_SPOTD: DDDDDDDDDDD......................................................................................... CONSENSUS: DDDDDDDDDDD......................................................................................... CONSENSUS_MOBI: ....DDDDDDDDDDDDD................................................................................... RICH_[D]: DsDgegesDD RICH_[DG]: DsDGeGesD RICH_[EG]: dsdGEGE RICH_fLPS_[D]: DsDgegesDD
220 240 260 280 300 AA: SSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPL STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: ..............................................D..................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400 AA: PEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDVP STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: ......................DDDDD................................DDDDDDDDDDD..D.DDDDDDDDD.......DDD..DD... DO_SPOTD: ..................................................................DDDDDDDDDDDD...................... CONSENSUS: ..................................................................DDDDDDDDDDDD...................... CONSENSUS_MOBI: ....................................................................................................
420 440 AA: GDKLLEPVVSMSDMLRSLSNTKPTVNEHDLLKLKKFTEDFGQEG STMI: DO_DISOPRED3: ..........................................DD DO_IUPRED2A: ...............DDDDDDD......D..............D DO_SPOTD: .........................................DDD CONSENSUS: ..........................................DD CONSENSUS_MOBI: ............................................