Citrus Sinensis ID: 000193

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------1610------1620------1630------1640------1650------1660------1670------1680------1690------1700------1710------1720------1730------1740------1750------1760------1770------1780------1790------1800------1810------1820------1830------1840------1850------1860------1870------1880-----

MVSTKQLLATIESALLGPSPPSPAQRIELIHAIHNSLSSFKSLLSYPPPKPSDRAQVQSREVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVSANQECGLMGRDPIEILRLASGLWYTERRDLITALYILFRAVVLDQGLEEDIVVDIQKYLEDLVNTGLRQRLISLMKELNREEPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSENNDTLKHQITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAARETVSSSSSSELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLENQRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNTNSGLQQLTLTSLGSLLNSATAVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLSGKLIPILERLELLGEDKVGRDLKVFRRLVTSLKEMTIQKLAL

cccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcHHHHHHcccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHcccccccHHHHHHHcccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHcccccccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHcccccHHHHHHHHHHHcccccHHHHHHcccccHHHHHHHHHHHccccccccHHHHHHccccccccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHcHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHcHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHccHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccHHHHHcHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcc

cccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcHHHHHHHHcccccHHHHHHHHccccEcccccccEccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccHHHHHHEEEEEEccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccccccccccHEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcHcccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccHHHHHcHccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHcccccccccHHHHHHHHHHHHccccHHccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHccHHHcccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccHcccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccHHHHHHcccccHHHHHHHHHHHHccccccHHHHcccccHHHHHHHHHHHHHHccccccHHHHHcccEcccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHcccccccccccccHHHHHHHHHccccccccccccccccccccccccHHHHHHHHccccccEEEccccccEEEcHHHHHHHHHHHHHHHHHHHccHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHccHHHHHHHcccEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHcHHcccccHHHHHHHHHHHHHHHHHHccc

MVSTKQLLATIESallgpsppspaqRIELIHAIHNSLSSFksllsypppkpsdraqvqsrevrlpdsppislddqDVQIALKLsddlhlneVDCVRLLVSAnqecglmgrdpIEILRLASGLWYTERRDLITALYILFRAVVLDQGLEEDIVVDIQKYLEDLVNTGLRQRLISLMKELnreeptglggplceryvlDSRGALVERRAVVYRERLILGHCLVLSVLvvrtspkdvKDAFSALKDSAAELSenndtlkhQITFSLLFSLVIAFISDalstvpdkssvlsrdasFRKEFHEIVMatgsdpivegfVGGVRLAWAVHLMLIHDEIaaretvsssssseLSNIRSCLETIFSNNVFQFLLDKALRTaayqnddedmVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIagshdfvhdsnlpsqqdteigplpfVSLLEFVSEIYqkepellsgndvLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQtggallpdfqegDAKALVAYLNVLQKVMENgnsierknwfpdieplfkllsyenvppyLKGALRNAIAACIHVSLVMKDNIWRLLeqydlpvvvgthvgntaqpiagQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEekdvsdrgrrFVGIFRFvydhvfgpfpqrayadpceKWQLVVACLKHFHMILNMYDIQEEDIDNAVeqsstltqsspiqmqLPVLELLKDFMSGKAVFRNIMGilqpgvdsiiternnqiygPLLEKAVQLSLEIVILVFEKDLllsdfwrplyqpvdvilSQDHNQIVALLEYvrydflpqIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIeksgddpgVLIMQLLIdnisrpapniTHLLLKfdldtpiertvlqpkfHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELcldpltcgptmdllsnkKYQFFVKHLdaigvaplpkrnsnqalRISSLHQRAWLLKLLAIELHagygsssthQEACQTILAHLFgrdhiedtdrtlslpFMVQNITehagtrtisKSKVLELLEVVqfrspdtaMKLSQIVSNMKYDLLAEEilgnpttsgkggiyyysergdrlidlsSFSDKLWKKLNIVypqlsnfgseaeLNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDAclgasaspdcsLRMAFILCQVALTCMAKLrdekflcpgglnsdsvTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQhmlapdvpTTVLQYLLLdeqdgedldLQKIDKEQAELTHANFSTLRKEAQAILDLFIKdatqgsepgktlSLYVLDALICIDHEKYFLNQLQSRGFLRSCLmnvsnvsyqdgkRSLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVglqgslrrvatkprralggdidrqrmiVTPMLRLVFSLTslvdtsdffevKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSkvwpyeesdeygFVQGLFGMMSSLfssdlenltFSQSARSLENQRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVSrslddyntnsglqqLTLTSLGSLLNSATAVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVRedyvsssdnIQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFqdssivsasSEAMRTITygaksdsgqdisllsgkliPILERLEllgedkvgrDLKVFRRLVTSLKEMTIQKLAL

MVSTKQLLATIESALLGPSPPSPAQRIELIHAIHNSLSSFKSLLSYPPPKPSDRAQVQSREVRLpdsppislddqDVQIALKLSDDLHLNEVDCVRLLVSANqecglmgrdPIEILRLASGLWYTERRDLITALYILFRAVVLDQGLEEDIVVDIQKYLEDLVNTGLRQRLISLMKELnreeptglggplcerYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSENNDTLKHQITFSLLFSLVIAFISDAlstvpdkssvlsrDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAaretvsssssSELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSStltqsspiqMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITehagtrtiskskVLELLEVVQfrspdtamKLSQIVSNMKYDLLAEeilgnpttsgkGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAvglqgslrrvatkprralggdidrqrmivTPMLRLVFSLTslvdtsdfFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLENQRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNTNSGLQQLTLTSLGSLLNSATAVLERAAEEKSLLlnkirdinelsrqevDEVINMCVredyvsssdniQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFQDSSIVSASSEAMRTITYgaksdsgqdiSLLSGKLIPILERLellgedkvgrdlKVFRRLVtslkemtiqklal

MVSTKQLLATIESALLGpsppspAQRIELIHAIHNslssfksllsypppkpsDRAQVQSREVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVSANQECGLMGRDPIEILRLASGLWYTERRDLITALYILFRAVVLDQGLEEDIVVDIQKYLEDLVNTGLRQRLISLMKELNREEPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSENNDTLKHQITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAARETVssssssELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDrgrrfvgifrfvYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVlqyllldeqdgedldlqKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTleaelalllRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLENQRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNtnsglqqltltslgsllnsataVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQlitllllltehvlnvilIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLSGKLIPILERLELLGEDKVGRDLKVFRRLVTSLKEMTIQKLAL

*****************************IHAI*******************************************VQIALKLSDDLHLNEVDCVRLLVSANQECGLMGRDPIEILRLASGLWYTERRDLITALYILFRAVVLDQGLEEDIVVDIQKYLEDLVNTGLRQRLISLMKELNREEPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSP**********************TLKHQITFSLLFSLVIAFISDALSTVP****VLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAA*************NIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLAR************VLNSYRIAGSHDFV***********EIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDI****************QMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSE**QIIE**GDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDG**L***********LTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDL*******************LKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNTNSGLQQLTLTSLGSLLNSATAVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFQDSSIVSA****MRTITYGA*****QDISLLSGKLIPILERLELLGEDKVGRDLKVFRRLVTSLKE********

**STKQLLATIES*************IELIHAIHNSLSSFKS****************************SLDDQDVQIALKLSDDLHLNEVDCVRLLVSANQE******DPIEILRLASGLWYTERRDLITALYILFRAVVLDQGLEEDIVVDIQKYLEDLVNTGLRQRLISLMKELNR**************VLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSENNDTLKHQITFSLLFSLVIAFISD*****************FRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIA**********SELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSY***********************PLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDE**********************ALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPV********************QFELNEIEARREQYPSTISFLNLLNAL*************FVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITE********LLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRS*********GDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDT************YSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAG***********QTILAHLF******************************SKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWK*********************KEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASA***CSLRMAFILCQVALTCMAKLRDE*******************MVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHM****************************************STLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSN****************CTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQG**************GDIDRQRMIVTPMLRLVFSLTSLVDTSD**EV**KVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLEN******************KKFQLCFSLSSYLYFMVTKKSLRLQ*********************LGSLLNSATAVLERAAEE*****************EV***********************YVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFQDSS**************************LSGKLIPILERLELLGEDKVGRDLKVFRRLVTSLKEMTIQKL**

MVSTKQLLATIESALLGPSPPSPAQRIELIHAIHNSLSSFKSLLSYP*****************PDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVSANQECGLMGRDPIEILRLASGLWYTERRDLITALYILFRAVVLDQGLEEDIVVDIQKYLEDLVNTGLRQRLISLMKELNREEPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSENNDTLKHQITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAA**************IRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGY********ACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSA********SELKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNTNSGLQQLTLTSLGSLLNSATAVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLSGKLIPILERLELLGEDKVGRDLKVFRRLVTSLKEMTIQKLAL

*VSTKQLLATIESALLGPSPPSPAQRIELIHAIHNSLSSFKSLLSYPPPKPSDRAQVQSREVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVSANQECGLMGRDPIEILRLASGLWYTERRDLITALYILFRAVVLDQGLEEDIVVDIQKYLEDLVNTGLRQRLISLMKELNREEPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSENNDTLKHQITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAARETVSSSSSSELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFL*****NSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLENQRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNTNSGLQQLTLTSLGSLLNSATAVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLSGKLIPILERLELLGEDKVGRDLKVFRRLVTSLKEMTIQKLAL

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SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MVSTKQLLATIESALLGPSPPSPAQRIELIHAIHNSLSSFKSLLSYPPPKPSDRAQVQSREVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVSANQECGLMGRDPIEILRLASGLWYTERRDLITALYILFRAVVLDQGLEEDIVVDIQKYLEDLVNTGLRQRLISLMKELNREEPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAxxxxxxxxxxxxxxxxxxxxxITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAARETVSSSSSSELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLENQRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNTNSGLQQLTLTSLGSLxxxxxxxxxxxxxxxxxxxxxxxxxxxxSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLSGKLIPILERLELLGEDKVGRDLKVFRRLVTSLKEMTIQKLAL

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1885	2.2.26 [Sep-21-2011]
Q92621		2012	Nuclear pore complex prot	yes	no	0.733	0.686	0.229	4e-51
P78847		1647	Nucleoporin nup186 OS=Sch	yes	no	0.346	0.396	0.224	1e-07

>sp\|Q92621\|NU205_HUMAN Nuclear pore complex protein Nup205 OS=Homo sapiens GN=NUP205 PE=1 SV=3	Back alignment and function desciption

 Score =  204 bits (520), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 392/1706 (22%), Positives = 696/1706 (40%), Gaps = 324/1706 (18%)

Query: 311  GFVGGVRLAWAVHLMLIH---DEIAARE-TVSSSSSSELSNIRSCLETIFSNNVFQFLLD 366
            G    VRLAWA+ L  I    D  A  E T +  + +EL+          ++NVF FL++
Sbjct: 324  GLQATVRLAWALALRGISQLPDVTALAEFTEADEAMAELA---------IADNVFLFLME 374

Query: 367  KALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSH 426
              + +  +  ++    Y+    +H LIT FL+  L   KVK+ +++A    ++  I  S 
Sbjct: 375  SVVVSEYFYQEE---FYIRR--VHNLITDFLA--LMPMKVKQLRNRADE--DARMIHMSM 425

Query: 427  DFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEP-------------ELLSGNDVLWT 473
               ++  +  ++D E        L+  + E+Y+K P             E L    ++ +
Sbjct: 426  QMGNEPPISLRRDLE-------HLMLLIGELYKKNPFHLELALEYWCPTEPLQTPTIMGS 478

Query: 474  FVVFAGEDHTNFQTL-----------------VAFLKMLSTLASSQEGASKVYELL---- 512
            ++  A +     Q +                 + +LKML  LA+  + A   + LL    
Sbjct: 479  YLGVAHQRPPQRQVVLSKFVRQMGDLLPPTIYIPYLKMLQGLANGPQCAHYCFSLLKVNG 538

Query: 513  -------QGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGAL----LPD--FQEGDAKALV 559
                   QG     + W   F  L +Y E  ++ L +  ++    LP     + +   L+
Sbjct: 539  SSHVENIQGAGGSPVSWEHFFHSLMLYHEHLRKDLPSADSVQYRHLPSRGITQKEQDGLI 598

Query: 560  AYLNVLQKVM---ENGNS--IERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHV 614
            A+L +   ++   EN      E   W P +  L  L    ++PP LK  L   +AA    
Sbjct: 599  AFLQLTSTIITWSENARLALCEHPQWTPVVVILGLLQC--SIPPVLKAELLKTLAA-FGK 655

Query: 615  SLVMKDNIWRLLEQYDLPVVVGTHVGNTAQ-PIAGQVYDMQFELNEIEARREQYPSTISF 673
            S  +  ++W+ LE         T +  T + P   Q   ++ ELNEIE+R E+YP T +F
Sbjct: 656  SPEIAASLWQSLEY--------TQILQTVRIPSQRQAIGIEVELNEIESRCEEYPLTRAF 707

Query: 674  LNLLNALIAEEKDVSDRGRR-----FVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACL 728
              L++ L+ E    S+ G       F    +F+ D VF  F  RAY    EKW++    L
Sbjct: 708  CQLISTLV-ESSFPSNLGAGLRPPGFDPYLQFLRDSVFLRFRTRAYRRAAEKWEVAEVVL 766

Query: 729  KHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGIL 788
            + F+ +L  Y+ Q ED    V+Q   L     I  + P   L+   ++   +    + +L
Sbjct: 767  EVFYKLLRDYEPQLEDF---VDQFVELQGEEIIAYKPPGFSLMYHLLNESPMLELALSLL 823

Query: 789  QPGVDSIITERNNQIYGPL-----LEKAVQLSLEIVILVFEKDLLLSDFWR--------- 834
            + GV  + T      Y P      LEKAVQ  L ++ L  +K+ L  D  R         
Sbjct: 824  EEGVKQLDT------YAPFPGKKHLEKAVQHCLALLNLTLQKENLFMDLLRESQLALIVC 877

Query: 835  PLYQPVDVI--LSQDHNQIVALLEYVRY-DFLPQIQQCSIKIMSILSSRMVGLVQLLLKY 891
            PL Q +  I   ++  + +V +  Y+ + +  P++   S KI+  +S      ++L+  +
Sbjct: 878  PLEQLLQGINPRTKKADNVVNIARYLYHGNTNPELAFESAKILCCISCNSNIQIKLVGDF 937

Query: 892  NAASS----LVEDYAACLE-------LRSEESQIIEKS----GDDPGVLIMQLLIDNISR 936
                S    L+  +  CL+       +R EE   +EK       +  + I+ LLI ++  
Sbjct: 938  THDQSISQKLMAGFVECLDCEDAEEFVRLEEGSELEKKLVAIRHETRIHILNLLITSLEC 997

Query: 937  PAPNITHLLLKFDLDTPIERTVLQ-------PKFHYSCLKIILEILEKVSKPDVNAL--- 986
              PN+   LL F+L  P+  T LQ       P+   +CL  IL ILEK ++     +   
Sbjct: 998  NPPNLALYLLGFELKKPVSTTNLQDPGVLGCPR---TCLHAILNILEKGTEGRTGPVAVR 1054

Query: 987  ----LHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALR 1042
                L E  +Q++Y+LC    T GPTM  L   +  F    L  +         SN+   
Sbjct: 1055 ESPQLAELCYQVIYQLCACSDTSGPTMRYLRTSQ-DFLFSQLQYLPF-------SNKEYE 1106

Query: 1043 ISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLF-----------GRDHIEDTD 1091
            IS L+Q +WL+K  +IEL     +S   Q +    L HL            G   IED +
Sbjct: 1107 ISMLNQMSWLMKTASIELRV---TSLNRQRSHTQRLLHLLLDDMPVKPYSDGEGGIEDEN 1163

Query: 1092 RTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLL---- 1147
            R++S  F+      H  T T  + K+L +L+ + F          +I   ++ D      
Sbjct: 1164 RSVS-GFL------HFDTATKVRRKILNILDSIDFSQ--------EIPEPLQLDFFDRAQ 1208

Query: 1148 AEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVK 1207
             E+++ N          + + RG  + ++      L  ++N     L    +  +   + 
Sbjct: 1209 IEQVIAN--------CEHKNLRGQTVCNVKLLHRVLVAEVNA----LQGMAAIGQRPLLM 1256

Query: 1208 EAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEV---SVSRRISALGNRSEILYQIL- 1263
            E I  +L++    NK L+   A+ H L  W Q+VE+   +  + +    +R  I+  IL 
Sbjct: 1257 EEISTVLQYVVGRNKLLQCLHAKRHALESWRQLVEIILTACPQDLIQAEDRQLIIRDILQ 1316

Query: 1264 ---DACLGASASPDCSLRMA-FILCQVALTCMAKLRDEK-------------FLCPGGLN 1306
               D  L   A+ +    +A  +    A    A L ++K             F+      
Sbjct: 1317 DVHDKILDDEAAQELMPVVAGAVFTLTAHLSQAVLTEQKETSVLGPAEAHYAFMLDSCFT 1376

Query: 1307 SDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESS-EALRRRQYALLLSYFQYCQHML 1365
            S       ++    + + + + +L KL+  IL+     + +R   Y  LL Y Q  Q   
Sbjct: 1377 SPPPEENPLVGFASIGDSSLYIILKKLLDFILKTGGGFQRVRTHLYGSLLYYLQIAQRPD 1436

Query: 1366 APDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQG 1425
             PD      + +       ED+   K+ +E       N + +     A++++  +DA  G
Sbjct: 1437 EPDTLEAAKKTMWERLTAPEDV-FSKLQRE-------NIAIIESYGAALMEVVCRDACDG 1488

Query: 1426 SEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDT----- 1480
             E G+ L+L +LD ++ +D ++ +L  L + G+L+     V   S  +  R+L +     
Sbjct: 1489 HEIGRMLALALLDRIVSVDKQQQWLLYLSNSGYLK-----VLVDSLVEDDRTLQSLLTPQ 1543

Query: 1481 ---LQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKP 1537
               L+   T E+++A L R++    + GA  L   G +  +A C+   +     R  T P
Sbjct: 1544 PPLLKALYTYESKMAFLTRVAKI--QQGALELLRSGVIVRLAQCQVYDM-----RPETDP 1596

Query: 1538 RRALG---------GDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKG 1588
            +   G           +DR R I+ P L+L      ++ TS   +   +   +V+ F+  
Sbjct: 1597 QSMFGMRDPPMFIPTPVDRYRQILLPALQLC----QVILTSSMAQ-HLQAAGQVLQFLIS 1651

Query: 1589 HQLLVDQVLQ-ENISEADELTMEQINLVVGILSK-VWP---------------YEESDEY 1631
            H   +  +L+ +++S     +++++ L+ GI+SK   P                E     
Sbjct: 1652 HSDTIQAILRCQDVSAG---SLQELALLTGIISKAALPGILSELDVDVNEGSLMELQGHI 1708

Query: 1632 G-FVQGLFGMMSSLFSSD-LENLTFSQ---SARSLENQRKSELKKFQLCFSLSSYLYFMV 1686
            G F +   G++S    SD L    F         +  + + EL   Q+C ++  Y   ++
Sbjct: 1709 GRFQRQCLGLLSRFGGSDRLRQFKFQDDNVEGDKVSKKDEIELAMQQICANVMEYCQSLM 1768

Query: 1687 TKKSLRLQ-----VSRSLDDYNTNSGLQQLT---------LTSLG---SLLNSATAVLER 1729
             + S   Q      + SL +     G +Q T         L  LG    LL  +      
Sbjct: 1769 LQSSPTFQHAVCLFTPSLSETVNRDGPRQDTQAPVVPYWRLPGLGIIIYLLKQSANDFFS 1828

Query: 1730 AAEEKSLLLNKIRDINELSRQEVDEVIN--MCVREDYVSSSDNIQKRRYV-AMVEMCQVA 1786
              +     ++K++++ +L   E+ E+    M    D +S++     ++YV A   + +V 
Sbjct: 1829 YYDSHRQSVSKLQNVEQLPPDEIKELCQSVMPAGVDKISTA-----QKYVLARRRLVKVI 1883

Query: 1787 GNRDQLITLLLLLTEHVLNVILIHFQ 1812
             NR +L++L   + E  L ++  H +
Sbjct: 1884 NNRAKLLSLCSFIIETCLFILWRHLE 1909

Homo sapiens (taxid: 9606)

>sp\|P78847\|NU186_SCHPO Nucleoporin nup186 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nup186 PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1885
297738947		1889	unnamed protein product [Vitis vinifera]	0.998	0.996	0.805	0.0
359484406		1934	PREDICTED: nuclear pore complex protein	0.988	0.963	0.769	0.0
449493695		1849	PREDICTED: nuclear pore complex protein	0.978	0.997	0.717	0.0
357510427		2047	Nuclear pore complex protein Nup205 [Med	0.938	0.864	0.727	0.0
240256431		1838	uncharacterized protein [Arabidopsis tha	0.972	0.997	0.690	0.0
297792433		1808	hypothetical protein ARALYDRAFT_495190 [	0.955	0.996	0.680	0.0
8843857		1837	unnamed protein product [Arabidopsis tha	0.957	0.982	0.669	0.0
387169521		1729	hypothetical protein 11M19.28 [Arabidops	0.884	0.964	0.650	0.0
242064430		1850	hypothetical protein SORBIDRAFT_04g00700	0.969	0.987	0.606	0.0
357139030		1824	PREDICTED: nuclear pore complex protein	0.961	0.993	0.597	0.0

>gi\|297738947\|emb\|CBI28192.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

 Score = 3107 bits (8056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1522/1889 (80%), Positives = 1679/1889 (88%), Gaps = 6/1889 (0%)

Query: 1    MVSTKQLLATIESALLGPSPPSPAQRIELIHAIHNSLSSFKSLLSYPPPKPSDRAQVQSR 60
            MVS KQLL+ IES+LLGPSPP+PAQ +ELIHAI +SLSS +SLLS+PPPKPSDRAQVQS+
Sbjct: 1    MVSPKQLLSIIESSLLGPSPPTPAQWVELIHAIRSSLSSLQSLLSFPPPKPSDRAQVQSK 60

Query: 61   EVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVSANQECGLMGRDPIEILRLAS 120
            EVRLPDSPPISLDDQDVQIALKLSDDLHLNE+DCVRLLVSANQE GLMGR+P+EILRLA 
Sbjct: 61   EVRLPDSPPISLDDQDVQIALKLSDDLHLNEIDCVRLLVSANQEWGLMGREPLEILRLAE 120

Query: 121  GLWYTERRDLITALYILFRAVVLDQGLEEDIVVDIQKYLEDLVNTGLRQRLISLMKELNR 180
            GLWYTERRDLITALY L RAVVLDQGLE D+VVDIQKYLEDL+NTGLRQRLISLMKELNR
Sbjct: 121  GLWYTERRDLITALYTLLRAVVLDQGLEADLVVDIQKYLEDLINTGLRQRLISLMKELNR 180

Query: 181  EEPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSA 240
            EEP GLGGP  ERYVLDSRGALVERRAVV+RERLILGHCLVLSVLVVRTSPKDVKD FS 
Sbjct: 181  EEPAGLGGPHSERYVLDSRGALVERRAVVFRERLILGHCLVLSVLVVRTSPKDVKDLFST 240

Query: 241  LKDSAAELSENNDTLKHQITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIV 300
            LKD AAEL+ ++DT+K+QITFS+LFSLVIAFISDAL TVPDK+SVL RDA+FR+EF EIV
Sbjct: 241  LKDCAAELNGSSDTIKYQITFSILFSLVIAFISDALGTVPDKASVLCRDATFRREFQEIV 300

Query: 301  MATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAARETVSSSSSSELSNIRSCLETIFSNNV 360
            +A+G+DPI EGFV  +RLAWA HLML+ D   A ETVSS+SS++L  I SCLE IFSNNV
Sbjct: 301  IASGNDPIAEGFVDVIRLAWAAHLMLVQDATVATETVSSASSNDLGYICSCLEVIFSNNV 360

Query: 361  FQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSY 420
            FQFLLDKAL+TAAYQNDDEDM+Y+ NAYLHK+ITCFLSH +ARDKVKE+K+KAMSVL+ Y
Sbjct: 361  FQFLLDKALQTAAYQNDDEDMIYVYNAYLHKMITCFLSHPIARDKVKETKEKAMSVLSPY 420

Query: 421  RIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGE 480
            R+ GSHDF+HD+N  SQ+  E+G  PFVSLLEFVSE+YQKEPELLSGNDVLWTFV FAGE
Sbjct: 421  RMVGSHDFMHDNNSNSQKAVEMGSQPFVSLLEFVSEVYQKEPELLSGNDVLWTFVNFAGE 480

Query: 481  DHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSL 540
            DHTNFQTLVAFLKML TLASSQEGA KV+ELLQGK FRS+GW TLFDCLSIY+EKFKQ+L
Sbjct: 481  DHTNFQTLVAFLKMLGTLASSQEGALKVFELLQGKTFRSVGWSTLFDCLSIYEEKFKQAL 540

Query: 541  QTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYL 600
            Q+ GA+LP+FQEGDAKALVAYLNVLQKVM+NGN +ERKNWFPDIEPLFKLLSYENVPPYL
Sbjct: 541  QSPGAILPEFQEGDAKALVAYLNVLQKVMQNGNPVERKNWFPDIEPLFKLLSYENVPPYL 600

Query: 601  KGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEI 660
            KGALRNAI   I VS  +KD IW  LEQYDLPVVVG ++GN AQP+A Q+YDM+FELNEI
Sbjct: 601  KGALRNAITTFIQVSPALKDTIWSYLEQYDLPVVVGPNLGNNAQPMASQIYDMRFELNEI 660

Query: 661  EARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAYADPCEK 720
            EARREQYPSTISFL LLNALIAEE+DVSDRGRRF+GIFRF+YDHVFGPFPQRAYADPCEK
Sbjct: 661  EARREQYPSTISFLKLLNALIAEERDVSDRGRRFIGIFRFIYDHVFGPFPQRAYADPCEK 720

Query: 721  WQLVVACLKHFHMILNMYDIQEEDIDNAVEQS--STLTQSSPIQMQLPVLELLKDFMSGK 778
            WQLVVACL+HF MIL+MYDI++ DIDNA +Q   S + QS+P+QMQLPV+ELLKDFMSGK
Sbjct: 721  WQLVVACLQHFRMILSMYDIRDGDIDNAGDQPQLSAVAQSAPLQMQLPVVELLKDFMSGK 780

Query: 779  AVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQ 838
             +FRNIMGIL PGV+SII ER NQIYG LLEKAV+LSLEI+ILVFEKD+LLSDFWRPLYQ
Sbjct: 781  TIFRNIMGILLPGVNSIINERTNQIYGQLLEKAVELSLEIIILVFEKDVLLSDFWRPLYQ 840

Query: 839  PVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLV 898
            P+DVIL+QDHNQIVALLEYVRYDF PQIQ+ SIKIMSI  SRMVGLVQLLLK NAAS L+
Sbjct: 841  PLDVILAQDHNQIVALLEYVRYDFRPQIQKLSIKIMSIFGSRMVGLVQLLLKSNAASFLI 900

Query: 899  EDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTV 958
            EDYAACLE  S ESQIIE S DD GVLIMQLLIDNISRPAPNITHLLLKFDLDT IERT+
Sbjct: 901  EDYAACLESVSVESQIIENSNDDLGVLIMQLLIDNISRPAPNITHLLLKFDLDTSIERTI 960

Query: 959  LQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQ 1018
            LQPKFHYSCLK+IL+IL+K+ KPDVNALLHEFGFQLLYELCLDPLT GPTMDLLSNKKYQ
Sbjct: 961  LQPKFHYSCLKVILDILDKLFKPDVNALLHEFGFQLLYELCLDPLTSGPTMDLLSNKKYQ 1020

Query: 1019 FFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTIL 1078
            FFVKHLD IG+APLPKRN NQALRISSLHQRAWLLKLLA+ELHAG   +STH++ACQ+IL
Sbjct: 1021 FFVKHLDTIGIAPLPKRNINQALRISSLHQRAWLLKLLAVELHAGDMVNSTHRDACQSIL 1080

Query: 1079 AHLFGRDHIE-DTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQ 1137
             H+FG D ++  TD + S  + V N     GTRTISKSKVLELLEVVQFRSPDT MK SQ
Sbjct: 1081 GHIFGPDVVDFTTDHSTSHAYSVHNSAADVGTRTISKSKVLELLEVVQFRSPDTTMKYSQ 1140

Query: 1138 IVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNF 1197
            +VSNMKYDLLAE+ILGNPTTSGK  +YYYSERGDRLIDL++F DKLW+K N + PQLS F
Sbjct: 1141 VVSNMKYDLLAEDILGNPTTSGKNNVYYYSERGDRLIDLTTFRDKLWQKCNFMNPQLSFF 1200

Query: 1198 GSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSE 1257
            GSE ELNDV+E IQQLLRWGWKYNKNLEEQAAQLHML GWSQVVEVS SRR+S L NR+E
Sbjct: 1201 GSEVELNDVRETIQQLLRWGWKYNKNLEEQAAQLHMLIGWSQVVEVSASRRLSHLENRAE 1260

Query: 1258 ILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIM 1317
            IL+Q+LDA L ASASPDCSL+MA  LCQVALTCMAKLRDE+FLCPGGLNSDSVT LD+I 
Sbjct: 1261 ILFQLLDASLTASASPDCSLKMAVTLCQVALTCMAKLRDERFLCPGGLNSDSVTCLDIIT 1320

Query: 1318 VKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYL 1377
            VKQLSNGACHS+LFKLI+AILR+ESSEALRRRQYALLLSYFQYC+HML  DVPT VL+ L
Sbjct: 1321 VKQLSNGACHSILFKLIVAILRHESSEALRRRQYALLLSYFQYCRHMLDLDVPTAVLR-L 1379

Query: 1378 LLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVL 1437
            LLDE DGEDLDL KIDKEQAEL  ANFS LRKEAQAILDL IKDATQGSE GKT+SLYVL
Sbjct: 1380 LLDEHDGEDLDLLKIDKEQAELAQANFSILRKEAQAILDLVIKDATQGSESGKTISLYVL 1439

Query: 1438 DALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELALLLRI 1497
            DALICIDHE++FLNQLQSRGFLRSCLMN+SN+S QDG RSLD+LQR CTLEAELAL+LRI
Sbjct: 1440 DALICIDHERFFLNQLQSRGFLRSCLMNISNISLQDGGRSLDSLQRTCTLEAELALVLRI 1499

Query: 1498 SHKYGKSGAQVLFSMGSLEHIASCKAVGLQ--GSLRRVATKPRRALGGDIDRQRMIVTPM 1555
            SHKYGKSGAQ+LFSMG+LEHIASCK V  Q  GS RR  TK RR    +ID+Q+ I+ P+
Sbjct: 1500 SHKYGKSGAQILFSMGALEHIASCKVVNFQMKGSFRRFETKLRRDAAVNIDKQQTIIAPI 1559

Query: 1556 LRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLV 1615
            LRLVFSLTSLVDTSDFFEVKNK+VREV+DF+KGHQLL DQV+QE++ EADELTMEQINLV
Sbjct: 1560 LRLVFSLTSLVDTSDFFEVKNKIVREVIDFVKGHQLLFDQVIQEDVLEADELTMEQINLV 1619

Query: 1616 VGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLENQRKSELKKFQLC 1675
            VGILSKVWPYEESDEYGFVQGLFGMM SLFS DLE+ T +Q  +SL+ QRKSEL  F+LC
Sbjct: 1620 VGILSKVWPYEESDEYGFVQGLFGMMRSLFSHDLESRTPTQPVQSLDKQRKSELNIFRLC 1679

Query: 1676 FSLSSYLYFMVTKKSLRLQVSRSLDDYNTNSGLQQLTLTSLGSLLNSATAVLERAAEEKS 1735
            FSLSSYLYF+VTKKSLRLQV     DY+    LQQ TLT L  LLNS T  LERAAEEKS
Sbjct: 1680 FSLSSYLYFLVTKKSLRLQVLDGPTDYHAPGRLQQPTLTLLVYLLNSVTTALERAAEEKS 1739

Query: 1736 LLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQLITL 1795
            LLLNKI+DINELSRQEVDE+INMCVR+D VSSSDN Q+RRY+AMVEMCQVAGNRDQLITL
Sbjct: 1740 LLLNKIQDINELSRQEVDEIINMCVRQDCVSSSDNTQRRRYIAMVEMCQVAGNRDQLITL 1799

Query: 1796 LLLLTEHVLNVILIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLSGKLIPILERLEL 1855
            LL L EHVLNVILIHFQD SI   +S   + IT+G K D+GQDIS+  GKLIP LERLEL
Sbjct: 1800 LLPLAEHVLNVILIHFQDGSITPGTSATTKAITFGDKFDNGQDISVFCGKLIPTLERLEL 1859

Query: 1856 LGEDKVGRDLKVFRRLVTSLKEMTIQKLA 1884
            L EDKVG +LKVFRRLV+SLKE+ IQKL 
Sbjct: 1860 LSEDKVGHNLKVFRRLVSSLKELGIQKLG 1888

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359484406\|ref\|XP_003633105.1\| PREDICTED: nuclear pore complex protein Nup205-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449493695\|ref\|XP_004159416.1\| PREDICTED: nuclear pore complex protein Nup205-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|357510427\|ref\|XP_003625502.1\| Nuclear pore complex protein Nup205 [Medicago truncatula] gi\|355500517\|gb\|AES81720.1\| Nuclear pore complex protein Nup205 [Medicago truncatula]	Back alignment and taxonomy information

>gi\|240256431\|ref\|NP_199933.5\| uncharacterized protein [Arabidopsis thaliana] gi\|332008669\|gb\|AED96052.1\| uncharacterized protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297792433\|ref\|XP_002864101.1\| hypothetical protein ARALYDRAFT_495190 [Arabidopsis lyrata subsp. lyrata] gi\|297309936\|gb\|EFH40360.1\| hypothetical protein ARALYDRAFT_495190 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|8843857\|dbj\|BAA97383.1\| unnamed protein product [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|387169521\|gb\|AFJ66182.1\| hypothetical protein 11M19.28 [Arabidopsis halleri]	Back alignment and taxonomy information

>gi\|242064430\|ref\|XP_002453504.1\| hypothetical protein SORBIDRAFT_04g007000 [Sorghum bicolor] gi\|241933335\|gb\|EES06480.1\| hypothetical protein SORBIDRAFT_04g007000 [Sorghum bicolor]	Back alignment and taxonomy information

>gi\|357139030\|ref\|XP_003571089.1\| PREDICTED: nuclear pore complex protein Nup205-like [Brachypodium distachyon]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1885
TAIR\|locus:2176197		1838	EMB3142 "EMBRYO DEFECTIVE 3142	0.637	0.653	0.644	0.0
RGD\|1309413		2008	Nup205 "nucleoporin 205" [Ratt	0.371	0.349	0.228	1.4e-45
UNIPROTKB\|Q92621		2012	NUP205 "Nuclear pore complex p	0.369	0.345	0.233	2.6e-44
UNIPROTKB\|F1N1V3		2012	NUP205 "Uncharacterized protei	0.369	0.345	0.236	2.2e-42
UNIPROTKB\|J9P7I1		2012	NUP205 "Uncharacterized protei	0.368	0.344	0.237	3.8e-41
UNIPROTKB\|F1PZ99		1985	NUP205 "Uncharacterized protei	0.360	0.342	0.232	1.4e-39
ZFIN\|ZDB-GENE-040715-8		2001	nup205 "nucleoporin 205" [Dani	0.196	0.185	0.252	1.8e-36
UNIPROTKB\|E1BV83		2017	NUP205 "Uncharacterized protei	0.367	0.343	0.217	7.8e-36
UNIPROTKB\|I3LC31		727	NUP205 "Uncharacterized protei	0.284	0.738	0.223	4.6e-12
FB\|FBgn0031078		2090	Nup205 "Nucleoporin 205kD" [Dr	0.241	0.218	0.241	5.5e-11

TAIR\|locus:2176197 EMB3142 "EMBRYO DEFECTIVE 3142" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3949 (1395.2 bits), Expect = 0., Sum P(2) = 0.
 Identities = 798/1239 (64%), Positives = 969/1239 (78%)

Query:   647 AGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDXXXXXXXXXXXXYDHVF 706
             + QVYDMQFELNE+EARREQYPSTISFLNL+NALIA EKDV+D                 
Sbjct:   633 SSQVYDMQFELNEVEARREQYPSTISFLNLINALIAGEKDVNDRG--------------- 677

Query:   707 GPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLT--QSSPIQMQ 764
                 +RAY+DPCEKWQLVVACL+HFHMIL+MYDIQEED+D   E    L   ++S +Q Q
Sbjct:   678 ----RRAYSDPCEKWQLVVACLQHFHMILSMYDIQEEDLDGFTEHPHFLVSLETSSLQTQ 733

Query:   765 LPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFE 824
             LP++ELLKDFMSGKA++RN+MGILQ GV+SII+ER ++ YG +LEKAVQLSLEI++LVFE
Sbjct:   734 LPIIELLKDFMSGKALYRNLMGILQVGVNSIISERLSKTYGKILEKAVQLSLEILLLVFE 793

Query:   825 KDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILS-SRMVG 883
             KDLL+SD WRPLYQP+D+ILSQDHNQI+ALLEYVRYD LPQIQ+ SIKIM+IL  SR+VG
Sbjct:   794 KDLLVSDVWRPLYQPLDIILSQDHNQIIALLEYVRYDSLPQIQRSSIKIMNILRCSRLVG 853

Query:   884 LVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITH 943
             LV +L+K +AA+SL+EDYAACLE R EE +++E S DD GVLIMQLL+DNI+RPAP+ITH
Sbjct:   854 LVPMLIKIDAANSLIEDYAACLEGRLEEGEVVENSCDDLGVLIMQLLVDNINRPAPSITH 913

Query:   944 LLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPL 1003
             LLLKFDLD P+E TVLQPKFHYSCLK+ILE+LEK+  PD+N LL EFGFQLL EL LDPL
Sbjct:   914 LLLKFDLDAPVEGTVLQPKFHYSCLKVILEMLEKLPNPDINFLLFEFGFQLLCELNLDPL 973

Query:  1004 TCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAG 1063
             T GPTMDLLS+KKYQFF++HLD IGVA LPKR+ +QALRISSLHQRAWLLKLLAI LH G
Sbjct:   974 TSGPTMDLLSSKKYQFFLQHLDTIGVATLPKRSGSQALRISSLHQRAWLLKLLAIALHTG 1033

Query:  1064 YGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEV 1123
              GSSS H EACQ+IL+HLFGR+  E  +   S     Q+  ++AGT +ISKSK L LLE+
Sbjct:  1034 SGSSSAHLEACQSILSHLFGREVTEAANEPFSSSTYPQDGLDYAGTSSISKSKALALLEI 1093

Query:  1124 VQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKL 1183
             +QFRSPD +M+L QIVS++KYD L E+ILGN  TS  G IYYYSERGDRLIDLSSFS+KL
Sbjct:  1094 LQFRSPDASMQLPQIVSSLKYDSLVEDILGNRDTSVSGSIYYYSERGDRLIDLSSFSNKL 1153

Query:  1184 WKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEV 1243
             W+KL+  +P + +F + AEL++V+E IQQLL+WGWKYN+NLEEQAAQLHML GWSQ+VEV
Sbjct:  1154 WQKLHSGFPLVDSFPNVAELSEVRETIQQLLKWGWKYNRNLEEQAAQLHMLAGWSQIVEV 1213

Query:  1244 SVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPG 1303
             S  RRIS+L NRSEILY+ILDA L ASASPDCSL+MAF+L QVALTC+AKLRD++F   G
Sbjct:  1214 SACRRISSLDNRSEILYRILDASLSASASPDCSLKMAFVLTQVALTCIAKLRDDRFSFQG 1273

Query:  1304 GLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQH 1363
              L+SD+VT LDV+MVK LS GACHS+LFKL+MAILR+ESSE+LRRRQYALLLSYFQYCQH
Sbjct:  1274 ALSSDTVTCLDVMMVKHLSTGACHSVLFKLVMAILRHESSESLRRRQYALLLSYFQYCQH 1333

Query:  1364 MLAPDVPTTVXXXXXXXXXXXXXXXXXKIDKEQAELTHANFSTLRKEAQAILDLFIKDAT 1423
             M+A DVPT+V                 KIDKEQA+L  ANF  ++KEAQ ILDL IKDA+
Sbjct:  1334 MIALDVPTSVVQFLLLNEQDGEDLDIQKIDKEQADLARANFFIIKKEAQGILDLVIKDAS 1393

Query:  1424 QGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQR 1483
             QGSE GKT+SLYVL+AL+CIDHE+YFL+QLQSRGF+RSCL ++SN+SYQDG   L++ QR
Sbjct:  1394 QGSEFGKTISLYVLEALVCIDHERYFLSQLQSRGFIRSCLGSISNISYQDGTHLLESQQR 1453

Query:  1484 ACTXXXXXXXXXRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGG 1543
             ACT         RISHKYGKSG QVLFSMG+LEHIASC+A+  +G++RRV  K +  +G 
Sbjct:  1454 ACTLEAELALLLRISHKYGKSGGQVLFSMGALEHIASCRAISFKGNMRRVDMKLQSDVGY 1513

Query:  1544 DIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISE 1603
             ++ +QR I+T +LRLVF+LTSLV+TS+FFE +NK+VR+V++FIKGHQ L DQ+L+E+ ++
Sbjct:  1514 NVQKQRTIITAVLRLVFALTSLVETSEFFEGRNKIVRDVVEFIKGHQSLFDQLLREDFTQ 1573

Query:  1604 ADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLEN 1663
             AD+L MEQI L VGILSKVWP+EE+D YGFVQGLF MMS LF         +   +S+ +
Sbjct:  1574 ADDLLMEQIILAVGILSKVWPFEENDGYGFVQGLFDMMSKLF--------IASPIKSILS 1625

Query:  1664 QRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNXXXXXXXXXXXXXXXXXXXX 1723
             Q  SELK  QL FSL+SYLYF+VTK SLRLQVS   D  +                    
Sbjct:  1626 QG-SELKLSQLRFSLTSYLYFLVTKNSLRLQVSD--DSLDSSTKLRQPTLLLLASLLSHV 1682

Query:  1724 XXVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMC 1783
                LERAAE+KSLLL+KIRDINELSRQ+VD +I +C  ++YV+ SDNI KRRY+AMVEMC
Sbjct:  1683 TDSLERAAEKKSLLLHKIRDINELSRQDVDAIIKICDSQEYVTPSDNIHKRRYIAMVEMC 1742

Query:  1784 QVAGNRDQXXXXXXXXXXXXXXXXXIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLS 1843
             Q+ GNRDQ                 IH QD S+  +S+E     +YG+KS   Q+++ L 
Sbjct:  1743 QIVGNRDQLITLLLQLAEHVLNIILIHLQDRSV--SSNERG---SYGSKSHIQQEVTDLC 1797

Query:  1844 GKLIPILERLELLGEDKVGRDLKVFRRLVTSLKEMTIQK 1882
             GKL P ++RL LL E KVG +LKVF+RL T++KEM IQK
Sbjct:  1798 GKLSPTIDRLALLNEGKVGHNLKVFQRLATTVKEMAIQK 1836

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005635 "nuclear envelope" evidence=IDA

RGD\|1309413 Nup205 "nucleoporin 205" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|Q92621 NUP205 "Nuclear pore complex protein Nup205" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1N1V3 NUP205 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|J9P7I1 NUP205 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PZ99 NUP205 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-040715-8 nup205 "nucleoporin 205" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|E1BV83 NUP205 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|I3LC31 NUP205 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

FB\|FBgn0031078 Nup205 "Nucleoporin 205kD" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1885
pfam11894		1612	pfam11894, DUF3414, Protein of unknown function (D	0.0

>gnl\|CDD\|221296 pfam11894, DUF3414, Protein of unknown function (DUF3414)	Back alignment and domain information

 Score =  731 bits (1888), Expect = 0.0
 Identities = 422/1741 (24%), Positives = 686/1741 (39%), Gaps = 279/1741 (16%)

Query: 28   ELIHAIHNSLSSFKSLLSYPPPKPSDRAQVQSREVRLPDSPPISLDDQDVQIALKLSDDL 87
            +L   +      F +LL  PP     R Q++S ++ L D    SL+ + +Q AL LSD+L
Sbjct: 27   DLEVELEKHKPDFLNLLDNPPKNDKSRQQLESGKITLGDGDEYSLNQEFIQEALILSDEL 86

Query: 88   HLNEVDCVRLLVSANQECGLMGRDPIEILRLASGLWYTERRDLITALYILFRA---VVLD 144
             L+E++   LL++A Q+    G     +  L   L+Y  R+ L+  L  L +A   V  D
Sbjct: 87   DLDELEAAELLLAAEQQQHFPGLSRGLVAVL---LYYDRRQYLLDCLRYLLQARSEVEWD 143

Query: 145  QGLEEDIVVDIQKYLEDLV-NTGLRQRLISLMKEL--------NREEPTGLGGPLCERYV 195
              LE ++V  + K+L+ L+   GL ++L+SL+KE               GLG     ++V
Sbjct: 144  LELEPELVALVTKFLDKLLKEMGLIKQLLSLLKEQIDKQKILGQLNTNRGLGFIEHIKFV 203

Query: 196  LDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSENNDTL 255
             D           +  E  +L   L         +  D+      LK       E ND L
Sbjct: 204  RDF----------LEEEHELLAQILFGLSKQSGLTRDDILKLLDHLKKL-----ERNDFL 248

Query: 256  KHQITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGG 315
                  +LL++  +       S   + S  LS         H  +    S   + G    
Sbjct: 249  LVHYLPALLYAFDL-------SGSSEGSLPLSDARQLHTAIHSELDNETS-WALPGLHAA 300

Query: 316  VRLAWAVHLMLIHDEIAARETVSSSSSSELSNIRSCLETIFSNNVFQFLLDKALRTAAYQ 375
            +RLAW   L+          ++ ++      +     +   S+  F+FLL  A  T    
Sbjct: 301  IRLAWLAELIGWCKAP---PSLRATGIDFKEDDEKLFDEALSDGAFEFLLSLAADTMP-- 355

Query: 376  NDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLP 435
                                        DK+++ +++    L S     S   +     P
Sbjct: 356  ----------------------------DKLRKLRNREDDQLLS-----SQTHLQLGLEP 382

Query: 436  SQQDTEIGPLPFVSLLEFVSEIYQKEPELLS-------GNDVLWTFVVFAGEDHTNFQTL 488
                +          L  ++ +Y+  PEL             L+ F+ +A + + +    
Sbjct: 383  PDDISL--RADLERFLLLIAYLYEGRPELALEFWGDPEPTSNLYGFLEWASDRNPSPLV- 439

Query: 489  VAFLKMLSTLASSQEGASKVYELL----QGKAFRSIGWRTLFDCLSIYDEKFK------Q 538
             AFL+ML++L+S  E A+  +ELL      K   SI W  +FD L  Y EK +      Q
Sbjct: 440  SAFLEMLASLSSGPENATNAFELLKEESGSKRSSSISWDHIFDSLKYYIEKLREKQQQSQ 499

Query: 539  SLQTGGALLPDFQ--EGDAKALVAYLNVLQKVMENGNSI-----ERKNWFPDIEPLFKLL 591
            ++Q   + LP+ +  E +   L AYL ++  V +          E  +W P ++ LF LL
Sbjct: 500  TIQRSRSPLPEIELEEEEIVGLSAYLRLISSVAKQSEVARSALLEHPSWTP-VDVLFGLL 558

Query: 592  SYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVY 651
               +VP +LK A+   +AA +  S  +  +IW  L+Q+ L   VG       Q    Q  
Sbjct: 559  KC-SVPLHLKAAILKTLAALVAKSPEIAYSIWTSLDQWQLGGTVG----APGQRSLQQPL 613

Query: 652  DMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSD-------------RGRRFVGI- 697
             +Q EL   E+  E Y  + +F+ LL+AL+A     S               G R  GI 
Sbjct: 614  GIQEELEAFESILEGYSLSRAFVQLLSALLAPLSSSSAFTFGKLPFPEDLGAGYRKPGIW 673

Query: 698  --FRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTL 755
                FV D VF  F  RAY DP EKW+L ++CL+     L  +D     + N+VE   +L
Sbjct: 674  PYLDFVLDEVFLKFKSRAYTDPAEKWELQLSCLEFIETCLRSFDPSF--LLNSVEPGISL 731

Query: 756  ---TQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAV 812
               T      ++L     + + +  + V + +  I++ GVD + +   +    PL EKAV
Sbjct: 732  DVDTSDFATYVRLHPGFRVMELLFNEKVLKALFRIIEEGVDELDSYSPDPGKSPL-EKAV 790

Query: 813  QLSLEIVILVFEKDLLLSDFWRPL-----YQPVDVILS---------QDHNQIVALLEYV 858
             L+L I+ LV E      D  RP+     + P++V+LS           +  I+A L   
Sbjct: 791  LLALRILDLVLELQDTYFDLLRPILKDSLFSPLNVLLSGLSSFEDAILFNLNIIAHLGLY 850

Query: 859  RYDFLPQIQQCSIKIMSILSSRMVG---------------LVQLLLKYNAASSLVEDYAA 903
                 P+I   S+KI+  +SS                   L+ +    + +  + + +  
Sbjct: 851  IGSDNPEIALSSLKILKKISSSPNFNEADSPEGERLRRNKLLGVFESIDESQRIKQGFVE 910

Query: 904  CLELRSEESQIIEKS-GDDPGVLIMQLLIDNISRP--APNITHLLLKFDLDTPIERTVLQ 960
             LE   +E +   +S G +    I+ LLI N+S+    PNI HLLL FD+   +     Q
Sbjct: 911  QLESELDEEEAGAESPGLELKEAILDLLISNLSQSPDTPNIAHLLLGFDVRGNVLSLGPQ 970

Query: 961  P----KFHYSCLKIILEILEK----VSKPDVN---ALLHEFGFQLLYELCLDPLTCGPTM 1009
                     S L  IL +LEK    +S  +++     L E  +QLLY+LC +PLT GPT+
Sbjct: 971  LPGFFGSPSSLLHSILNLLEKSLDSISGLNIDEAPPRLAELAYQLLYKLCSNPLTSGPTL 1030

Query: 1010 DLLSNKKYQFFVKHLDAIGVAPLPKR----------------NSNQALRISSLHQRAWLL 1053
              L +    F  +HL ++                        +S+    IS L+QR+WLL
Sbjct: 1031 RYLRSS-NDFLFRHLASLPFIDPNTLWDGLSFALANDNKFFLSSSIGALISFLNQRSWLL 1089

Query: 1054 KLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTIS 1113
            + LAIELH+   S +      + IL+ L G                    T         
Sbjct: 1090 QYLAIELHST--SKNGQPSRKERILSALLGG---------------SSTYTADGEP--GD 1130

Query: 1114 KSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRL 1173
               +  LL+ + F       +L          L  +  L N            ++ G RL
Sbjct: 1131 NPTIFSLLDFLDFEFK---EELPPPQLEFFDGLDLDLCLEN---------EPDNDYGVRL 1178

Query: 1174 IDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHM 1233
             DLS     L  +   +        ++ +L  +   I++LL +  + N++ E ++AQL  
Sbjct: 1179 YDLSKLERLLRLEKRTLQSSGQL--AQGQLKAIMAEIEKLLEYVTERNRSRELRSAQLKA 1236

Query: 1234 LTGWSQVVEVSVSRRISALGNRSEILYQILDACLGA-SASPDCSLRMAFILCQVALTCMA 1292
            L  W+Q+V+V ++    +   RS  + +IL A L       D  +  A  L  +ALT  A
Sbjct: 1237 LHSWTQLVQVLLTDCPLSGDVRSNFILEILQAILPKLEDYIDSDVEFAEELASLALTLFA 1296

Query: 1293 KLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYA 1352
             LR            D  T LD I V  L +   H L    I  IL + SS  LR   Y 
Sbjct: 1297 LLRQ-----------DRPTGLDAIDVGSLIDSRLHQLFKTCIDGILSSGSSPELRSDLYV 1345

Query: 1353 LLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQ 1412
            +LL Y Q      +PD  + + +                   E   L+      ++   +
Sbjct: 1346 ILLKYLQIVFKKESPDGESLLSR-----------------LTETMSLSRETLQIIKSYGE 1388

Query: 1413 AILDLFIKDATQGSEPGKTLSLYVLDALICIDHEK--YFLNQLQSRGFLRSCLMNV--SN 1468
             ++++   DA  G    + L+L +LDAL+ +D  K  + L  L    +L   + ++  ++
Sbjct: 1389 RLIEVICNDAIDGEGTCRILALLLLDALVHLDSRKDNFILESLSKSNYLSLLVDSLKTTD 1448

Query: 1469 VSYQDGKRSLDTLQRA-CTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQ 1527
             + Q     L  L       EA+LA L R++    +SGAQ L   G  E +A CK   + 
Sbjct: 1449 EALQAALTPLPELLYELYAFEAKLAFLTRLAQT--RSGAQALLQAGLFEILAECKFFDID 1506

Query: 1528 GSLRRVATKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIK 1587
              L  +           ++R   ++ P+L+L+ ++   +  S+        V +V  F+K
Sbjct: 1507 PDL-GLDLLFDENSPDALERYYELLVPVLQLITAILLSMGPSN-----KSAVIQVRAFLK 1560

Query: 1588 GHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSS 1647
             H+ LV  VL+               L              +     QGL  +       
Sbjct: 1561 AHRDLVVGVLK-----------RDALLGGSGALSEAKGAGGELS--EQGLVELAKLFTVL 1607

Query: 1648 D 1648
            D
Sbjct: 1608 D 1608

This family of proteins are functionally uncharacterized. This protein is found in eukaryotes. Proteins in this family are typically between 764 to 2011 amino acids in length. This protein has a conserved LLG sequence motif. Length = 1612

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1885
PF11894		1691	DUF3414: Protein of unknown function (DUF3414); In	100.0
KOG1835		1704	consensus Uncharacterized conserved protein [Funct	100.0
KOG1835		1704	consensus Uncharacterized conserved protein [Funct	99.96
PF10487		931	Nup188: Nucleoporin subcomplex protein binding to	99.88
KOG4833		573	consensus Uncharacterized conserved protein [Funct	99.3

>PF11894 DUF3414: Protein of unknown function (DUF3414); InterPro: IPR021827 This family of proteins are functionally uncharacterised	Back alignment and domain information

Probab=100.00  E-value=7.4e-210  Score=2209.55  Aligned_cols=1515  Identities=31%  Similarity=0.455  Sum_probs=1259.9

Q ss_pred             hHHHHHHHHhhhCCCCCCChhhHHHHHHHHHHhHHHHHhcccCCCCChhhhhhhhcCceEcCCCCccccCHHHHHHHHHH
Q 000193            4 TKQLLATIESALLGPSPPSPAQRIELIHAIHNSLSSFKSLLSYPPPKPSDRAQVQSREVRLPDSPPISLDDQDVQIALKL   83 (1885)
Q Consensus         4 ~~~L~~~~e~~~~~~~~~~~~~~~~l~~~L~~~~~df~~ll~~ppkn~~sR~~l~sg~V~l~~~~~~~ln~~fi~~al~L   83 (1885)
                      |++||..++ +....+ +.  ...++++.|++|+++|+++|++||||++||++|++|+|++++|++|+||++|+++|++|
T Consensus         7 f~~L~~~l~-~~~~~~-~~--~~~~l~~~L~~~~~~l~~ll~~p~kn~~sR~~l~sg~v~l~~g~~~~ln~~f~~~al~L   82 (1691)
T PF11894_consen    7 FKDLYNSLE-ALSSSD-PE--NVDELEQELEAHKPDLLNLLDNPPKNAKSRSQLESGKVTLGDGDEYKLNQEFIQEALIL   82 (1691)
T ss_pred             HHHHHHHHH-HHhcCC-cc--hHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHhcCCeeeCCccccccCHHHHHHHHHh
Confidence            999999999 433332 33  23567789999999999999999999999999999999999988999999999999999


Q ss_pred             hhhcCCCHHHHHHHHHhhcccccccCCChhhhhhhHhhHhHHhhHHHHHHHHHHHHhh---hcccCcchHHHHHHHHHHH
Q 000193           84 SDDLHLNEVDCVRLLVSANQECGLMGRDPIEILRLASGLWYTERRDLITALYILFRAV---VLDQGLEEDIVVDIQKYLE  160 (1885)
Q Consensus        84 SD~ldLdEi~a~eLL~~a~~~~~~~~~~~~~l~r~a~~lyy~~Rr~ll~~Lr~Ll~~~---~~~~~l~~~~~~~v~~~~~  160 (1885)
                      ||+|||||++|||||++|++++...|+++++   +|+++||+||++|++|||+|++++   .|+.+++++++..+.+|++
T Consensus        83 Sd~ldLdE~~a~~Ll~~a~~~~~~~g~~~~~---~Av~lyy~~R~~lL~~Lr~Ll~~~~~~~~~~~l~~~~~~~~~~~~~  159 (1691)
T PF11894_consen   83 SDELDLDELEAAELLLTAESQSQFPGRSRGL---VAVILYYDRRRYLLDCLRLLLQARDGREWDSELSPELVSDVQKFTD  159 (1691)
T ss_pred             hhhcCCCHHHHHHHHHHhhccCCCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHH
Confidence            9999999999999999999998888888876   899999999999999999999998   3889999999999999999


Q ss_pred             HHh-hchHHHHHHHHHHH-hccc-------ccCCCCCcchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCh
Q 000193          161 DLV-NTGLRQRLISLMKE-LNRE-------EPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSP  231 (1885)
Q Consensus       161 ~l~-~~~l~~~il~~l~~-l~~~-------~~~~lg~~~~~~~v~d~~~~L~~~~e~~~~e~~~L~~~lil~~~~~~~~~  231 (1885)
                      +++ +.|.+.++++.+++ ++..       +++++|++++.+.   .|+.+       .+||+.||+|+++|+...++++
T Consensus       160 ~ll~~~~~i~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~r~~l-------~~~~~~La~iL~~~~~~~~~~~  229 (1691)
T PF11894_consen  160 KLLESMGLIERLLQLLKESIDKAKELGQLNTNRALGFQEHIEF---QRDSL-------FEEHESLAQILYLLVKQSYLSP  229 (1691)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHH---HHHHH-------HHHHHHHHHHHHHHHhccCCCH
Confidence            999 45899999999998 6542       1224555544322   33334       4556679999999998888999


Q ss_pred             hhHHHHHHHHHhhhhhccCCCCchhHHHHHHHHHHHHHHHHhhccCCCCCCCccccCCHHHHHHHHHHHhcCCCCCccch
Q 000193          232 KDVKDAFSALKDSAAELSENNDTLKHQITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEG  311 (1885)
Q Consensus       232 ~d~~~ll~~lk~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lh~~i~~~~~~w~~~~  311 (1885)
                      ++++++++++|+++++    |.+.+|+      +|++++++... ++++++..|+..+.++.+.+++.+.... +|+.+|
T Consensus       230 ~~~~~ll~~l~~~~~~----D~~~~~~------lpall~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~l~~~~-~w~~~~  297 (1691)
T PF11894_consen  230 EDFKKLLDHLKKLDSN----DFLTVHY------LPALLAAIDIS-GGSPLGSLPLSDDRELHSQIHKELDSDS-DWKLPG  297 (1691)
T ss_pred             HHHHHHHHHHHhcCCC----chhhHHH------HHHHHHHHHhh-cccccccCcchhHHHHHHHHHHhhcccc-cccccc
Confidence            9999999999998776    7777877      66666666443 3566777766666666666666666532 499999


Q ss_pred             HHHHHHHHHHHHHHh-hhchhhh-hcccCCCchhHHHhHHHHHHHHHhCChHHHHHHHHhcc------------------
Q 000193          312 FVGGVRLAWAVHLML-IHDEIAA-RETVSSSSSSELSNIRSCLETIFSNNVFQFLLDKALRT------------------  371 (1885)
Q Consensus       312 ~~a~i~law~~~l~~-~~~~~~~-~~~~~~~~~~~~~~i~~~~~~al~~~vf~fl~~~ll~~------------------  371 (1885)
                      ++++++|||+++|++ |++.|.. .+     ..++.++++++++.|+++|||+||+++++++                  
T Consensus       298 l~a~i~l~w~~~l~~~~~~~~~~~~~-----~~d~~~~~~~~~~~ai~~gaf~fL~~~~~~~~~~~~~~~~~~~~~~~~~  372 (1691)
T PF11894_consen  298 LKAVIQLAWLLFLIGWCKDDPSLEAQ-----GIDFKDDDEKLFEEAIEDGAFEFLLSIAADTPEWQDPSRWSNFYDFRSL  372 (1691)
T ss_pred             HHHHHHHHHHHHHHHHHcCCcccccc-----ccCHHHHHHHHHHHHHHcChHHHHHHHHHhcccccchhhhhhhHHHHHH
Confidence            999999999999999 7776641 21     3446777889999999999999999998887                  


Q ss_pred             ----cCCCC-----CchHH-HHHHHHHHHHHHHHHhhhhhhHhHHHHhhhhHHhhhhhhhhcCCcccccCCCCCCCCCCC
Q 000193          372 ----AAYQN-----DDEDM-VYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTE  441 (1885)
Q Consensus       372 ----~~~~~-----~~~~~-~~~~~~~~h~li~~fIs~p~~~~klkelr~~~d~~l~~~R~~~~~~feed~~~~~~~~~~  441 (1885)
                          .|...     .++.+ .+++.+++|.||++||+|  |+.|||+||++|||.+.+   .+.+  ++++.  ..++++
T Consensus       373 L~~~~p~~~~~~~~~s~~~~~~~~~~~l~~~i~~fI~~--m~~~l~~Lr~~eed~~~~---~~~~--~~~~~--~~~~~~  443 (1691)
T PF11894_consen  373 LQRKIPRLTPENDSFSEFFNEEFFMRQLHSFIDSFISN--MPDKLRKLRDREEDSLLS---SQTH--QQEGE--DPPDDI  443 (1691)
T ss_pred             HHhhccccccccccccHHHHHHHHHHHHHHHHHHHHHh--hHHHhhhhchhHHHHHHH---hHhh--hhcCC--CCCccc
Confidence                01000     13444 559999999999999996  888999999999999633   2332  22111  111346


Q ss_pred             CCCCcHHHHHHHHHHHhcCCccccccccccc----------hhHhhhcccCCCcchHHHHHHHHHHhcCCchhHHHHHHH
Q 000193          442 IGPLPFVSLLEFVSEIYQKEPELLSGNDVLW----------TFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYEL  511 (1885)
Q Consensus       442 ~~~~dle~fl~~ia~~Y~~~p~~~~~~~~fW----------gFi~wa~~~~~~~~~~~afl~ML~sLa~~~~~A~~~~~~  511 (1885)
                      +++.|||+||++|+++|++||+++   .+||          ||++||+++++ +++++|||+||+|||+|++||++||+|
T Consensus       444 ~~~~dlE~fl~~ia~~Y~~rPe~~---~~FW~d~e~~s~l~gFl~wa~~~~~-~~l~~af~~ML~sLs~g~~~A~~a~~~  519 (1691)
T PF11894_consen  444 SLRADLERFLLLIAYLYDGRPELA---LEFWSDPEVTSNLYGFLRWASDRNP-SPLVSAFLEMLASLSSGPECASAAFNF  519 (1691)
T ss_pred             chhhhHHHHHHHHHHHHcCChHHH---HHhCCCcccchhHhHHHHHHhhcCC-chhHHHHHHHHHHHcCChHHHHHHHHH
Confidence            789999999999999999999888   8999          59999999976 778899999999999999999999999


Q ss_pred             hhCCC-----CccccHHHHHHHHHHHHHHhhc-cc-cCCC------CCCC--CCCcchHHHHHHHHHHHHHHHhcCcc--
Q 000193          512 LQGKA-----FRSIGWRTLFDCLSIYDEKFKQ-SL-QTGG------ALLP--DFQEGDAKALVAYLNVLQKVMENGNS--  574 (1885)
Q Consensus       512 L~~~~-----~~~vSW~~if~~L~~Y~~~l~~-~~-~~~~------~~~~--~~~~~e~~~L~a~L~Li~~V~~~~~~--  574 (1885)
                      |++++     .+++||+|||++|++|++++++ .. ++.+      ...+  +++|+|++||+|||+||++||++++.  
T Consensus       520 L~~~~~~~~~~~~~SW~~if~~L~~Y~~~l~~~~~~~~~~~~~~~~~~~~~~el~~ee~~~L~a~L~Li~~V~~~s~~ar  599 (1691)
T PF11894_consen  520 LKDNSGKGRRSSSVSWDQIFQSLQYYIDKLRQQQQQQQSQSIQRSRSPPPEIELSPEEVEMLSAYLRLISSVVRNSEQAR  599 (1691)
T ss_pred             HhhcccCCCCCCcccHHHHHHHHHHHHHHhccccCCCCccccccCCCCCcccCCCHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence            99765     4599999999999999999993 22 2111      1123  36999999999999999999999874  


Q ss_pred             ---ccccccCCChHHHHHhccCCCCChhHHHHHHHHHHHhhhcChhhHHHHHHHHhhcCCCcccccCCCCCCCCCCCccc
Q 000193          575 ---IERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVY  651 (1885)
Q Consensus       575 ---~e~~~w~~~i~~L~~Ll~~~~vp~~Lka~i~~~Laal~~~s~~~a~~iW~~Ld~~~i~~~~g~~~~~~~~~~~~~~~  651 (1885)
                         +++++|.+ +++||+|++ |+||+.|||++|++|+||+..++++++.||+.||+|++....+++.+..    .++..
T Consensus       600 ~~l~~~~~~~~-~~~L~~L~~-~~vp~~Lkaai~~~Laal~~~~~~~~~~iW~~Ld~~~~~~~~~~~~~~~----~~~~~  673 (1691)
T PF11894_consen  600 SALLENPNWNP-IDILFGLLS-CPVPPSLKAAIFNALAALAAKSPEIANQIWQLLDQWQILSTAPTPSSSA----LPQPS  673 (1691)
T ss_pred             HHHHhCCCCch-HHHHHHHhc-CCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCCcccc----cCCCc
Confidence               45667875 899999999 6999999999999999995439999999999999998844432211111    12457


Q ss_pred             cHHHHHHHHhhhccCCcchHHHHHHHHHhhcCC------------CCCCCCccc---cchhHHHHHHhhhCCCCccccCC
Q 000193          652 DMQFELNEIEARREQYPSTISFLNLLNALIAEE------------KDVSDRGRR---FVGIFRFVYDHVFGPFPQRAYAD  716 (1885)
Q Consensus       652 ~i~~el~~iE~~~~~Yp~T~aFl~Ll~~Li~~~------------~~~lg~g~R---~~~yi~FV~~~Vf~~~~~r~Y~~  716 (1885)
                      |+..|++++|++.++||+|+||++||++|++++            |..+|.|||   +|||++||+++||++ ++|.|++
T Consensus       674 ~i~~el~~~e~~~~~y~~t~aFl~Ll~~Li~~~~~~~~~~~~l~~P~~LG~~~R~~Gi~pY~~fv~~~Vf~~-~~r~y~~  752 (1691)
T PF11894_consen  674 GIQSELEEFESRLEEYPETRAFLQLLNALISPPSDSSFLNDSLPFPENLGAGYRMPGIWPYVDFVLDEVFLK-SSRSYKD  752 (1691)
T ss_pred             cHHHHHHHHHhhhcCCchHHHHHHHHHHHhCCCcccccccccCCCccccCccccCCCcHHHHHHHHHHHHhc-cchhcCC
Confidence            999999999999999999999999999999988            667999999   899999999999999 9999999


Q ss_pred             chhhHHHHHHHHHHHHHHHhccCCChhhhhhhhhccCCcCCC----CCccccC---cHHHHHHHhccChHHHHHHHHhhc
Q 000193          717 PCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQS----SPIQMQL---PVLELLKDFMSGKAVFRNIMGILQ  789 (1885)
Q Consensus       717 ~~erw~v~~~~L~~~~~~L~~y~~~~~dl~~~~~~~~~~~~~----~~l~~~~---P~~~vm~~~L~~~~v~~~L~~ii~  789 (1885)
                      +.|||+++..||++|+++|.+|+|+   +.....+++.+.+.    .++.+|+   ||++||.+||+++++++.||+|++
T Consensus       753 ~~ekw~l~~~cL~~~~~~L~~f~~~---~i~~~~~~~~~~d~~~~~~~~~~~v~~hP~~~vm~~~l~~~~~~~~l~~ii~  829 (1691)
T PF11894_consen  753 PSEKWQLALSCLEFFEKCLSSFDPS---FILNSNESNINLDSIVDTSDLATYVKLHPGFRVMLELLFDEKVLRSLFSIID  829 (1691)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCHH---HHhhcccccccccccccccchhhhhhcCcHHHHHHHHhcCcHHHHHHHHHHH
Confidence            9999999999999999999999984   33333333332221    3455554   999999779999999999999999


Q ss_pred             cChhhhhhhhcccccCcHHHHHHHHHHHHHHHHHhhhhhhhhhhccccc------chhhhh----------ccCchHHHH
Q 000193          790 PGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQ------PVDVIL----------SQDHNQIVA  853 (1885)
Q Consensus       790 ~gvd~l~~~~~~~~~~~~l~~~v~~aL~Il~~vL~~q~~f~d~lrp~~~------~l~~~L----------s~~~~~I~~  853 (1885)
                      +|+|.+.++.+ +++++++++|+++||+|++++|++|++|++.+||+++      +.+.++          .++...|++
T Consensus       830 ~g~~~l~~~~~-~~~~~~l~~~v~~~L~Il~~vL~~Q~~f~~~~~p~~~~~~~~~~~~~~~~~~~sf~~~~~~~l~iv~~  908 (1691)
T PF11894_consen  830 EGVDSLDSYSP-DPGGSPLEECVLRSLRILNRVLELQDTFLDVVRPILKSDIIYRPLDVLLLGLNSFEDAILFNLNIVVH  908 (1691)
T ss_pred             HhHHHHhhcCc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccChHHHhhccCcchhhhcchHHHHHH
Confidence            99999987765 2357899999999999999999999999999999887      334333          357788999


Q ss_pred             HHhhhcCCCcchhHHHHHHHHHHHhh--hH-------------HhHHHHHhccchhHHHHHHHHHHhccccccccc-ccc
Q 000193          854 LLEYVRYDFLPQIQQCSIKIMSILSS--RM-------------VGLVQLLLKYNAASSLVEDYAACLELRSEESQI-IEK  917 (1885)
Q Consensus       854 l~~yv~~~~~p~ial~AikIL~~ls~--~~-------------~~l~~~l~~~~es~~I~~~fv~~Le~~~~~~~~-~e~  917 (1885)
                      ||.|||.++ |+|++.|+|||++++.  ..             ++++++|++++++.+|++|||+|||.++++.++ .+.
T Consensus       909 l~l~~~~~~-p~ial~alkIL~~ls~s~~~~~~~~~~~~~~~~n~ll~~l~~~~es~~I~~~fv~~Le~~~~~~~~~~~~  987 (1691)
T PF11894_consen  909 LGLYVGSDH-PEIALLALKILSKLSSSPKFNSADSFSSRRLRRNRLLTILESSDESERIRFGFVEQLEADIDEFEEGAES  987 (1691)
T ss_pred             hHhhcCCCC-HHHHHHHHHHHHHHHcCCCCcccccccccccchhHHHHHHhcccHHHHHHHHHHHHHccccccccccccc
Confidence            999999877 9999999999999983  22             579999999999999999999999988655443 233


Q ss_pred             CCCChHHHHHHHHHhcCCCC--CChHhhhhhccccCCCCccccccC----CCCcchHHHHHHHHHhcCCCC-------Cc
Q 000193          918 SGDDPGVLIMQLLIDNISRP--APNITHLLLKFDLDTPIERTVLQP----KFHYSCLKIILEILEKVSKPD-------VN  984 (1885)
Q Consensus       918 ~~~~~k~~IL~lLl~~L~~~--~PnlAHlLLGF~~~~~~~~~~l~p----~~~~ScLhsIL~lL~~~~~~~-------~~  984 (1885)
                      ....+|..||+||++||+.+  +||||||||||++++++..+..+|    ++++||||+||++|+++++..       .+
T Consensus       988 ~~~~ik~~IL~lL~~~L~~~~~~PniAHlLLGF~~~~~~~~~~~~~~g~~~~~~S~lhsiL~lL~~~~~~~~~~~~~~~~ 1067 (1691)
T PF11894_consen  988 PSLSIKLAILDLLLENLSQPPPAPNIAHLLLGFDVRGNVSSLSLQDPGFFGSPRSCLHSILDLLESSLDSDSNSDIDYWP 1067 (1691)
T ss_pred             hhhHHHHHHHHHHHHHhCCCCCCCcHHHHHhCCCcCCchhhcccccccccCCcCcHHHHHHHHHHhccccccCcchhccc
Confidence            34679999999999999755  999999999999998877888885    467999999999999987632       24


Q ss_pred             hhHHHHHHHHHHHhhcCCCCCHHHHHHHhcchhhhHHHhhhhcC-CCCCCCCCCch------------hHHHHHHHHHHH
Q 000193          985 ALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIG-VAPLPKRNSNQ------------ALRISSLHQRAW 1051 (1885)
Q Consensus       985 p~L~e~~~~lL~~Lc~~p~Ts~~~L~~LR~~~~dFf~~~L~~~~-i~~~p~~~~~~------------~~~~s~L~~rs~ 1051 (1885)
                      |+|+|+||+|||+||+||.||.+||||||+++ |||.+|+...| ++|.+.|+|..            .++.+||++|||
T Consensus      1068 ~~L~e~~~~ll~~Lc~~p~TS~~~L~~LR~~~-df~~~~l~~~p~i~~~~~w~g~~~~~~~f~~~~~~~~~~~~L~~Rs~ 1146 (1691)
T PF11894_consen 1068 PRLAELCYRLLYKLCSSPLTSEPTLRYLRSNN-DFFFRHLSSLPFIDPQTIWDGERISDPDFFLSTSASALISFLHQRSW 1146 (1691)
T ss_pred             HHHHHHHHHHHHHHHcCCcchHHHHHHHHhHH-HHHHHHHHcCCCCCcccccccccccccccccCCchHHHHHHHHHHHH
Confidence            89999999999999999999999999999975 99999999999 78899999753            278899999999


Q ss_pred             HHHHHHHHHHhhcCCCchhhHHHHHHHHHhcCCCCCCCCCccccccccccccccccCcccccchhhhhccccccCCCCCc
Q 000193         1052 LLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDT 1131 (1885)
Q Consensus      1052 lL~~~AlEL~~~~~~~s~~~~~~~~ll~~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~lld~l~F~~~~~ 1131 (1885)
                      +|||+|+|||.++.  .++++.+++|++.|+|.....           ..+      +.....+.||+|||+++|.+ ..
T Consensus      1147 lL~~~AlEL~~~s~--~~~~s~~~~l~~~Ll~~~~~~-----------~~~------~~~~~~~~i~~lld~l~~~~-~~ 1206 (1691)
T PF11894_consen 1147 LLKYLALELHSLSQ--SGQRSQKRRLLSLLLGNSQSS-----------TDD------GEPIINPSIFDLLDFLDFDF-SW 1206 (1691)
T ss_pred             HHHHHHHHHHHHHh--cCCHHHHHHHHHHHhcccccc-----------CCC------CCCccccHHHHHHhhhCCCc-cc
Confidence            99999999999874  478889999999999922111           011      11124556999999999999 22


Q ss_pred             hhhhhhhhhhcchhhHHHHHhcCCCCCCCCCceeecCCccchhcHHHHHHHHHHhhhhccccccCCCchhhHhHHHHHHH
Q 000193         1132 AMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQ 1211 (1885)
Q Consensus      1132 ~~~~p~~~~~~~~~~~~~~~~~~c~~~~~g~~~~~~~~g~~~~di~~l~~~L~~e~~~~~~~~~~~~~~~~~~~~~~Ei~ 1211 (1885)
                      ..+.|++  ++|.+..++..+.+|. .        +.+|++++|+.++++++..+.+..+++.. . +.++.+.+++|++
T Consensus      1207 ~~~~~~l--~~f~~~~l~~~~~~c~-~--------~~~g~~~~Dl~~l~~lL~~~~~~~~~~~~-~-~~~~~~~v~~E~~ 1273 (1691)
T PF11894_consen 1207 EFPPPQL--EFFDDLDLELCLEECT-D--------SEGGVRLYDLSKLHELLQLERKSLQSSGQ-L-TAQQREAVEEEIQ 1273 (1691)
T ss_pred             CCCCchh--hhhchhcHHHHHHhcc-c--------cCCCCeEeeHHHHHHHHHHHHHHhhcccc-c-chhhHHHHHHHHH
Confidence            3344443  5566667777777772 1        33467899999999999999988877521 1 4567888999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHhhhccC-CCccchHHHHHHHHHHHHH
Q 000193         1212 QLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASA-SPDCSLRMAFILCQVALTC 1290 (1885)
Q Consensus      1212 ~il~~~~~~N~~~~~~~a~l~~L~aW~qLv~V~~s~~~~~~~~r~~~Il~~L~~il~ki~-~~~~~~~~a~~Ls~l~l~L 1290 (1885)
                      .|++|++++|+.++.++||+++|+||+|||+|++++|......|.++|+|+|+.++||++ ..+.+++++.++++++++|
T Consensus      1274 ~il~~~~~~N~~~~~~~a~~~~L~sW~qLv~V~~~~~~l~~~~r~~~ile~Lq~iLpkl~~~~~~~~~~a~~ls~l~l~L 1353 (1691)
T PF11894_consen 1274 KILEYAVARNRRRELAAAQLHALESWRQLVEVLVSDCPLSPDQRSNFILELLQAILPKLEDYPECDPEFAEELSSLALTL 1353 (1691)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHhhcccccCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999998889999999999999999999 5889999999999999999


Q ss_pred             HHHhhhccccCCCCCCCCCccchhhhhhcccccchhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhcccCCCCc
Q 000193         1291 MAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVP 1370 (1885)
Q Consensus      1291 l~~Lr~~~~~~~~~~~~~~~~~~d~~~~~~L~~~~~~~iL~~ll~~Il~~~ss~~lR~~lY~~ll~yLq~~~~~~~~~~~ 1370 (1885)
                      +++||+++.....           ....++++.+++++||+.+|+||++|++++.+|+|+|++|++||+++.+....+..
T Consensus      1354 ~~~L~~~~~~~~~-----------~~~~~~l~~~~L~~lf~~~l~~Il~~~ss~~lR~~lY~~l~~yL~~~~~~~~~~~~ 1422 (1691)
T PF11894_consen 1354 LAKLRQDRISQSD-----------SEDSGSLPDSRLHQLFKSCLQGILSSGSSQRLRSNLYAILLNYLQIVQKNSSLEDG 1422 (1691)
T ss_pred             HHHHHhhhhcccc-----------cccccccchhHHHHHHHHHHHHHhccCCCHhHHHHHHHHHHHHHHHhcccccccch
Confidence            9999998641100           11134588889999999999999999999999999999999999999876531111


Q ss_pred             hhHHHhhhcccccCcchhhhhhhhHHHHhHHHHHHHHHHhhhHHHHHHhhcccCCCcchHHHHHHHHHHHHhcc---Cch
Q 000193         1371 TTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICID---HEK 1447 (1885)
Q Consensus      1371 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~e~LidvIc~DA~~G~~~~r~~Al~lLd~Lv~l~---~~~ 1447 (1885)
                      .....    +..+         ++....++++++++|+++|++|||+||+||++|||+|||+|++|||+|+++|   .++
T Consensus      1423 ~~~~~----~~~~---------~~~~~~l~~~~~~~i~~~g~~Li~vic~DA~~g~~~~r~~Al~lLdaLv~ld~~~~~~ 1489 (1691)
T PF11894_consen 1423 QSLSS----RLDD---------SSEQSSLEKMNLQIIKSYGERLIDVICRDAIDGHGVCRILALSLLDALVQLDSQEKSN 1489 (1691)
T ss_pred             hcchh----hccc---------chhhHHHHHHHHHHHHHhhhHHHHHHHhHhhcCcccHHHHHHHHHHHHHHhccccccc
Confidence            11110    0000         1122358999999999999999999999999999999999999999999999   579


Q ss_pred             hHHHHHhhcCcHHHHHHHhhhh--hhhcccC-CcchhhHHHHHHHHHHHHHHhhcccCcchHHHHHhcchHHHhhhcccc
Q 000193         1448 YFLNQLQSRGFLRSCLMNVSNV--SYQDGKR-SLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAV 1524 (1885)
Q Consensus      1448 ~il~~L~~~g~L~~~v~sl~~~--~L~~~l~-~~~~l~~L~~yea~malLlRiAq~~tr~GA~~Ll~~~l~~~L~~~~~l 1524 (1885)
                      +|+++|.|+|||+++|++++++  .+++.+. .|+++++||+|||+|+||+||||  ||.||++|+++|+|++|++|+||
T Consensus      1490 ~il~~L~~~g~L~~lv~sl~~~d~~l~~~~~~~~~~l~~L~~yea~laLL~RiAq--tr~GA~~Ll~~~lf~~L~~~~~l 1567 (1691)
T PF11894_consen 1490 FILEYLSRRGYLKSLVDSLKRTDEDLQASLQPIPDSLRELYVYEAKLALLLRIAQ--TRSGAEALLQSGLFQVLAECKFL 1567 (1691)
T ss_pred             HHHHHHHhCCcHHHHHHHHHhhHHHHHhccCCCCcchHhHHHHHHHHHHHHHHHc--ChHHHHHHHHCCHHHHHHcCCCc
Confidence            9999999999999999999754  7888766 89999999999999999999999  89999999999999999999999


Q ss_pred             cccCccccc--ccC--CCccCCchhhhhhHhHHHHHHHHHHHhhhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000193         1525 GLQGSLRRV--ATK--PRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQEN 1600 (1885)
Q Consensus      1525 ~~~P~~~~~--~~~--~~~~~p~~~~ry~~lL~PvlrL~~svl~~~~s~G~~~~n~~~~~qv~~Fl~~h~~lv~~vLr~~ 1600 (1885)
                      ++|||.+..  .++  +..+ |++.+|||++|+||||||+++++++   |  ++|++++.||++||.+|+++|++|||++
T Consensus      1568 ~~~Pdl~~~~~~~~~~~~~~-p~~~~ry~~lL~PvlrLi~ail~s~---G--~~n~~~~~qv~~FL~~h~~lv~~vLk~~ 1641 (1691)
T PF11894_consen 1568 DADPDLGLDLMFDNSDPMSF-PSALERYYQLLVPVLRLISAILSSL---G--SSNKSAVQQVLNFLKAHRDLVVGVLKRD 1641 (1691)
T ss_pred             CCCCccchhhcccccccccC-chHHHHHHHHHHHHHHHHHHHHHhc---C--cccHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999997643  222  2223 9999999999999999997777766   8  9999999999999999999999999999


Q ss_pred             cCCCChhhHHHHHHHHHHHHhccccccCCchhhHHHHHHHHHHHh
Q 000193         1601 ISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLF 1645 (1885)
Q Consensus      1601 ~~~~~~~~L~el~ll~~ll~~~~~~~~~~~~~~~~~~~~l~~~l~ 1645 (1885)
                      ++..+.+..+...++++...+.+++++....  .+++..|+.+++
T Consensus      1642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~f~ 1684 (1691)
T PF11894_consen 1642 ALIGNLGSSEIYSLVNSKLSKDWPYEESRLS--QQGLEELVKLFM 1684 (1691)
T ss_pred             ccccccccccchhhhhhhhhhhhhhhhhhHH--HHHHHHHHHHHh
Confidence            9999888888888888888888777655322  456667666544

This protein is found in eukaryotes. Proteins in this family are typically between 764 to 2011 amino acids in length. This protein has a conserved LLG sequence motif.

>KOG1835 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG1835 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF10487 Nup188: Nucleoporin subcomplex protein binding to Pom34; InterPro: IPR018864 This is one of the many peptides that make up the nucleoporin complex (NPC), and is found across eukaryotes []	Back alignment and domain information

>KOG4833 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1885
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-15
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-14
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-12
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-10

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 81.4 bits (200), Expect = 2e-15
 Identities = 108/750 (14%), Positives = 227/750 (30%), Gaps = 252/750 (33%)

Query: 812  VQLSLEIVILVFEKDLL-------LSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLP 864
             Q   + ++ VFE   +       + D  +       ++  ++ + I+            
Sbjct: 14   HQYQYKDILSVFEDAFVDNFDCKDVQDMPKS------ILSKEEIDHIIMS---------K 58

Query: 865  QIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGV 924
                 ++++   L S+   +VQ  ++      L  +Y   +     E +        P  
Sbjct: 59   DAVSGTLRLFWTLLSKQEEMVQKFVE----EVLRINYKFLMSPIKTEQR-------QPS- 106

Query: 925  LIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVN 984
            ++ ++ I+   R   N   +  K+++     +  L+       L+  L  L    +P  N
Sbjct: 107  MMTRMYIEQRDR-LYNDNQVFAKYNV--SRLQPYLK-------LRQALLEL----RPAKN 152

Query: 985  ALLHE---FGFQLL-YELCLDP------------LT---CGPTMDLLSNKKYQFFVKHLD 1025
             L+      G   +  ++CL              L    C     +L  +  Q  +  +D
Sbjct: 153  VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL--EMLQKLLYQID 210

Query: 1026 AIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRD 1085
                +     +SN  LRI S+  +A L +LL  + +          E C  +L ++    
Sbjct: 211  PNWTS-RSDHSSNIKLRIHSI--QAELRRLLKSKPY----------ENCLLVLLNVQNAK 257

Query: 1086 HIEDTD---RTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFR--------SPDTAMK 1134
                 +   + L        +T    TR    +  L                 +PD    
Sbjct: 258  AWNAFNLSCKIL--------LT----TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305

Query: 1135 LSQIVSNMKYDLLAEEIL-GNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQ 1193
            L     + +   L  E+L  NP       I       + + D  +  D  WK +N    +
Sbjct: 306  LLLKYLDCRPQDLPREVLTTNPRRLS--II------AESIRDGLATWDN-WKHVN--CDK 354

Query: 1194 LSNFGSEAELNDVKEAIQQLLRWGWKY--------NKNLEEQAAQLHMLTGWSQVVEVSV 1245
            L+    E+ LN ++ A  + +     +        + ++      L ++  W  V++  V
Sbjct: 355  LTTI-IESSLNVLEPAEYRKM-----FDRLSVFPPSAHIPTIL--LSLI--WFDVIKSDV 404

Query: 1246 SRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGL 1305
                            +++     S            L +         +  K       
Sbjct: 405  M--------------VVVNKLHKYS------------LVE---------KQPK------- 422

Query: 1306 NSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRR---QYALLLSYFQYCQ 1362
              +S   +              S+  +L    ++ E+  AL R     Y +  ++     
Sbjct: 423  --ESTISI-------------PSIYLELK---VKLENEYALHRSIVDHYNIPKTFDSD-- 462

Query: 1363 HMLAPDVPTTVLQYL---LLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDL-F 1418
             ++ P +      ++   L + +  E + L              F  +       LD  F
Sbjct: 463  DLIPPYLDQYFYSHIGHHLKNIEHPERMTL--------------FRMV------FLDFRF 502

Query: 1419 IKDATQGSEPGKTLSLYVLDAL---------ICIDHEKY---------FLNQLQS----- 1455
            ++   +        S  +L+ L         IC +  KY         FL +++      
Sbjct: 503  LEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICS 562

Query: 1456 --RGFLRSCLMNVSNVSYQDGKRSLDTLQR 1483
                 LR  LM      +++  +    +QR
Sbjct: 563  KYTDLLRIALMAEDEAIFEEAHKQ---VQR 589

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00