Citrus Sinensis ID: 000580

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410
MSSEEEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTTHPREWPPLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWYKRCRKVCHTAGVGNVISRWIVPNVFRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMYLSTSASSGNSGTVGGVGGFNNHHFRPSCLKVVTTRPSPPLGVGGGLGFGAISLAGRNQSDDISLKVETAYYSAGTLVLSDASPPTMSSLIIVSKDPSSQSYPTGSLGTSARISRALRESVTSLPVEGRMLSVTDILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLENKIRSLEKFLRCIRNQRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIRNLFGSYSRNADSNGAGTSNKRQRLPYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDAFNDQIDAATREYALVQRQQCYEIITSALRSLKGDSSQREFGSPVRPAGPRSALDPASRKKYICQIVQLGVQSPDRIFHEYLYRTMIDLGLENELLEYGGPDLVPFLQSAGREPIQEVRAVSGITSAASLMGQTGTPIPSNEAKYFDLLARYYVLKRQHLLAAHVLLRLAERRSTDEKDAPTLDQRRQYLSNAILQAKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELEAIASSLETSVDMSESTQNGSAPDSSSTTDANYAKIVREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEKAALERLDSQVESVGDEDIARALLAACKGAAEPVLNTYDQXXXXXXXXYPVELFCRHQTSGYAFFDQCSWYLESGQCLYLQKEWVQALQEHL
cccHHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccEEEEEEEcEEEEEEccccccccccccccccEEEEEEEEccccccccccEEEEEEEEccEEEEEEEEEEccccccccccccccccccccEEEEcccEEEEEEEEcccccEEEEEccccEEEEEEEcccccccccccEEEccccccccccccccccccccccccEEEEEEEccccEEEEEEcccEEEEEEEcccccccccEEEEEcccccccccccccccccccccccccccccEEEEEEccccccccEEEEEEEccccEEEEEccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccEEEEEEcccEEEEEEcccccccEEEEEEcccccccccccccccccccccccccEEEEccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEccHHHHHHHHHHccccHHHHHHHHHHHcHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccEEccccccccccEEEEEccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHcccHHHHccHHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHHcccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccccccccHHHHHHHcccccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHcccccHHHHHHcccccccccccccccccccccccccccccccHHHHccccHHHHHHHHHHHHHHHc
ccHHccccccHHHHHHHHHHHHHHHHHHHcccHHHHHcccccccccccccccccccccEEEEEccccHHHHHHHHHccccccccccccccccEEEEEEcccEEEEEEccccccEEEEcccccEEEEEEEEcccccccHHcEEEEEEEEccEEEEEEEEEEccccccccccccEEEcccccEEEEcccEEEEEEEEccccEEEEEcccccEEEEEEEccccHHHHccEEEccccccccccccccccHccccccccEEEEEEEccccEEEEEccccEEEEEEcccccccccHEEEHHHHHHHHHHHHHccccccccccccccccccEEEEEEccccHcccEEEEEEEcccEEEEEEccccccccccccccccccccccccccEEEEEEccccccccccccccccccccccccccccccccHEHEccccEEEEEEcccccccEEEEEcccccccccccccccccccccHHHHHHHEcccccccEccHHcccccccccccccccccccccccccccccccccccccccccHHHHHHccccccEEEEEEcccEEEEEEccHHHHHHHHHHccccHHHHHHHHHHccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEcccHHHHHHHHHHHHHHHHcccEEEEcccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHccHHccccccccccccccccEEEccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHccHHHHHHHHHccHHHHcccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHccccHHHHHHHHHHHcccHHHHEEEHcccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccHccHHHHHHHHccccccHHEEEEEEEEccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHc
MSSEEEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASryashpytthprewpplvevvdtwdlPTVLVERYnaaggegnalcgIFPEIRRAWASVDNSLFLwrfdkwdgqcpeytgeeQVICAVGlakskpgiFVEAIQYLLILATPVELILVGVCcsgagdgtdpyaeislqplpeytvpsdgvtmtcitctdkgrillagrdgNIYELLYTTGSGWYKRCRKVCHTAGvgnvisrwivpnvfrfgavdpivELVFDNERQLLYARTEEMKLQVfvlgpngdgplkKVAEERNlfnqrdthhggrqttgqraphrstkpsvvsisplstleSKWLHLVAVLSdgrrmylstsassgnsgtvggvggfnnhhfrpsclkvvttrpspplgvggglgFGAISlagrnqsddiSLKVETAYYSAgtlvlsdaspptmsSLIIvskdpssqsyptgslgtsaRISRALRESvtslpvegrmlsvtdilplpdtatTVQSLYSELEFcgfeisgescekssgklwargdlstqhilprrriVVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSENLISNAVAEKAAEafvdprlvgmpqlegsnalantrtaaggfsmgqvvqeaepvfsgaYEGLCLCAsrllfplwelpvmvvkgdaisenGVVVCRLSSGAMQVLENKIRSLEKFLRCIRNQRRGLYGYVAgmgdlsgsilygtgadsvagdQSLIRNLFgsysrnadsngagtsnkrqrlpyspAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDRLATRLISALMEYytdpdgrgtvddisgrlregcpsyfkesdyKFFLAVECLEraavtsdseeKENLAREAFNFLskvpesadlRTVCRRFEDLRFYEAVVRLPLqkaqaldpagdafnDQIDAATREYALVQRQQCYEIITSALRSlkgdssqrefgspvrpagprsaldpasrKKYICQIVQlgvqspdrIFHEYLYRTMIDLGLEnelleyggpdlvpflqsagrepiqevRAVSGITsaaslmgqtgtpipsneaKYFDLLARYYVLKRQHLLAAHVLLRLAerrstdekdaptldQRRQYLSNAILQaknatnsdslvgstrgafdNGLLDLLEGKLAVLRFQTKIKDELEAIASSLETsvdmsestqngsapdsssttdaNYAKIVREKAKELSLDLKSITQLyneyavpfELWEICLEMLYFAnytgdadssIIRETWARLIDQALSKGGIAEACSVLKRvgshmypgdgavlpLDTLCLHLEKAALERLDSQVESVGDEDIARALLAACKGaaepvlntydqxxxxxxxxypvelfcrhqtSGYAFFDQCSWYLESGQCLYLQKEWVQALQEHL
MSSEEEILMrdvtnaglvvsdriGREVASQLDVEEALEASRYAshpytthprewpplVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWYKRCRKVCHTAGVGNVISRWIVPNVFRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFnqrdthhggrqttgqraphrstkpsvvsisplstlesKWLHLVAVLSDGRRMYLSTSASSGNSGTVGGVGGFNNHHFRPSCLKVVTTRPSPPLGVGGGLGFGAISLAGRNQSDDISLKVETAYYSAGTLVLSDASPPTMSSLIIVSkdpssqsyptgslgtsarisrALREsvtslpvegrmlsvtdilplpDTATTVQSLYSELEFCGFEISGESCEKSSGKLwargdlstqhilprRRIVVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLENKIRSLEKFLRCIRNQRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIRNLFGSYSrnadsngagtsnkrqrlPYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDRLATRLISALMeyytdpdgrgtvddisgRLREGCPSYFKESDYKFFLAVECLERAavtsdseekeNLAREAFnflskvpesadlRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDAFNDQIDAATREYALVQRQQCYEIITSALrslkgdssqrefgspvrpagprsaldpaSRKKYICQIVqlgvqspdrIFHEYLYRTMIDLGLENELLEYGGPDLVPFLQSAGREPIQEVRAVSGITSAASLmgqtgtpipsnEAKYFDLLARYYVLKRQHLLAAHVLLRlaerrstdekdaptldqRRQYLSNAILqaknatnsdslvgSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELEAIASSLETSVDMsestqngsapdsssttdaNYAKIVREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEKAALERLDSQVESVGDEDIARALLAACKGAAEPVLNTYDQXXXXXXXXYPVELFCRHQTSGYAFFDQCSWYLESGQCLYLQKEWVQALQEHL
MSSEEEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTTHPREWPPLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWYKRCRKVCHTAGVGNVISRWIVPNVFRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMYLstsassgnsgtvggvggFNNHHFRPSCLKVVTTRpspplgvggglgfgaislagRNQSDDISLKVETAYYSAGTLVLSDASPPTMSSLIIVSKDPSSQSYPTGSLGTSARISRALRESVTSLPVEGRMLSVTDILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLENKIRSLEKFLRCIRNQRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIRNLFGSYSRNADSNGAGTSNKRQRLPYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDAFNDQIDAATREYALVQRQQCYEIITSALRSLKGDSSQREFGSPVRPAGPRSALDPASRKKYICQIVQLGVQSPDRIFHEYLYRTMIDlglenelleyggPDLVPFLQSAGREPIQEVRAVSGITSAASLMGQTGTPIPSNEAKYFDLLARYYVLKRQHllaahvllrlaerrSTDEKDAPTLDQRRQYLSNAILQAKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELEAIASSLETSVDMSESTQNGSAPDSSSTTDANYAKIVREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEKAALERLDSQVESVGDEDIarallaackgaaEPVLNTYDqxxxxxxxxYPVELFCRHQTSGYAFFDQCSWYLESGQCLYLQKEWVQALQEHL
**********DVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTTHPREWPPLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWYKRCRKVCHTAGVGNVISRWIVPNVFRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGP***********************************************LSTLESKWLHLVAVLSDGRRMYL**********TVGGVGGFNNHHFRPSCLKVVTTRPSPPLGVGGGLGFGAISLAGRNQSDDISLKVETAYYSAGTLVLS********************************************PVEGRMLSVTDILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQL****ALANTRTAAGGFSMGQVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLENKIRSLEKFLRCIRNQRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIRNLFG*************************ELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAV************EAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDAFNDQIDAATREYALVQRQQCYEIITSAL*******************************KYICQIVQLGVQSPDRIFHEYLYRTMIDLGLENELLEYGGPDLVPFLQSAGREPIQEVRAVSGITS*************SNEAKYFDLLARYYVLKRQHLLAAHVLLRLA************************************VGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDEL**********************************KIVREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGGIAEACSV*************AVLPLDTLCLHLEKAALERLDSQVESVGDEDIARALLAACKGAAEPVLNTYDQXXXXXXXXYPVELFCRHQTSGYAFFDQCSWYLESGQCLYLQKEWVQA*****
************TNAGLVVSDRIGREVASQLDVE**********HPYTTHPREWPPLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWYKRCRKVCHTAGVGNVISRWIVPNVFRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFN*******************STKPSVVSISPLSTLESKWLHLVAVLSDGRRMYLSTSASS********************CLKVVT***********************************AYYSAGTLVLSDASPPTMSSLIIVSKDPSS***************RALRESVTSLPVEGRMLSVTDILPLPDTATTVQSLYSELE********************RGDLSTQHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVH**********EKAAEAFVDPRL***********************************SGAYEGLCLCASRLLFPLWELPVM******************SGAMQVLENKIRSLEKFLRCIRNQRR***************************************************NKRQRLPYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDRLATRLISALMEYY**********DISGRLREGCPSYFKESDYKFFLAVE****************LAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAG***************LVQRQQCYEIITSALRSLK**************************KKYICQIVQLGVQSPDRIFHEYLYRTMIDLGLENELLEYGGPDLVPFLQSAGR************************PIPSNEAKYFDLLARYYVLKRQHLLAAHVLLRLAERRSTDEKDAPTLDQRRQYLSNAILQA********************LLDLLEGKLAVLRFQTKIKDELEA*******************************AKIVREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGG*AEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEKAALERLDSQVESVGDEDIARALLAACKGAAEPVLNTYDQ********YPVELFCRHQTSGYAFFDQCSWYLESGQCLYLQKEWVQALQEH*
********MRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTTHPREWPPLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWYKRCRKVCHTAGVGNVISRWIVPNVFRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFNQRD*************************SPLSTLESKWLHLVAVLSDGRRMYLSTSASSGNSGTVGGVGGFNNHHFRPSCLKVVTTRPSPPLGVGGGLGFGAISLAGRNQSDDISLKVETAYYSAGTLVLSDASPPTMSSLIIVSK***************ARISRALRESVTSLPVEGRMLSVTDILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLENKIRSLEKFLRCIRNQRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIRNLFGSYSRNAD***********RLPYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAA*********NLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDAFNDQIDAATREYALVQRQQCYEIITSALRSL*************************SRKKYICQIVQLGVQSPDRIFHEYLYRTMIDLGLENELLEYGGPDLVPFLQSAGREPIQEVRAVSGITSAASLMGQTGTPIPSNEAKYFDLLARYYVLKRQHLLAAHVLLRLAERRSTDEKDAPTLDQRRQYLSNAILQAKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELEAIASSLE**********************ANYAKIVREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEKAALERLDSQVESVGDEDIARALLAACKGAAEPVLNTYDQXXXXXXXXYPVELFCRHQTSGYAFFDQCSWYLESGQCLYLQKEWVQALQEHL
******ILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTTHPREWPPLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWYKRCRKVCHTAGVGNVISRWIVPNVFRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMYLSTSASSGNSGTVGGVGGFNNHHFRPSCLKVVTTRPSPPLG********************ISLKVETAYYSAGTLVLSDASPPTMSSLIIVSKDPSSQSYPTGSLGTSARISRALRESVTSLPVEGRMLSVTDILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLENKIRSLEKFLRCIRNQRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIRNLFGSYSRNADSNGAGTSNKRQRLPYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDAFNDQIDAATREYALVQRQQCYEIITSALRSLKGDSSQ*************SALDPASRKKYICQIVQLGVQSPDRIFHEYLYRTMIDLGLENELLEYGGPDLVPFLQSAGREPIQEVRAVSGITSAASLMGQTGTPIPSNEAKYFDLLARYYVLKRQHLLAAHVLLRLAERRSTDEKDAPTLDQRRQYLSNAILQAKNA**********RGAFDNGLLDLLEGKLAVLRFQTKIKDELEAIASSLETSVDMSESTQNGSAPDSSSTTDANYAKIVREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEKAALERLDSQVESVGDEDIARALLAACKGAAEPVLNTYDQXXXXXXXXYPVELFCRHQTSGYAFFDQCSWYLESGQCLYLQKEWVQALQEHL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSSEEEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTTHPREWPPLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWYKRCRKVCHTAGVGNVISRWIVPNVFRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMYLSTSASSGNSGTVGGVGGFNNHHFRPSCLKVVTTRPSPPLGVGGGLGFGAISLAGRNQSDDISLKVETAYYSAGTLVLSDASPPTMSSLIIVSKDPSSQSYPTGSLGTSARISRALRESVTSLPVEGRMLSVTDILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAxxxxxxxxxxxxxxxxxxxxxRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIRNLFGSYSRNADSNGAGTSNKRQRLPYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDAFNDQIDAATREYALVQRQQCYEIITSALRSLKGDSSQREFGSPVRPAGPRSALDPASRKKYICQIVQLGVQSPDRIFHEYLYRTMIDLGLENELLEYGGPDLVPFLQSAGREPIQEVRAVSGITSAASLMGQTGTPIPSNEAKYFDLLARYYVLKRQHLLAAHVLLRLAERRSTDEKDAPTLDQRRQYLSNAILQAKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELEAIASSLETSVDMSESTQNGSAPDSSSTTDANYAKIVREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEKAALERLDSQVESVGDEDIARALLAACKGAAEPVLNTYDQXXXXXXXXYPVELFCRHQTSGYAFFDQCSWYLESGQCLYLQKEWVQALQEHL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1410 2.2.26 [Sep-21-2011]
O756941391 Nuclear pore complex prot yes no 0.787 0.798 0.267 4e-96
Q99P881391 Nuclear pore complex prot yes no 0.790 0.801 0.261 2e-95
P371991390 Nuclear pore complex prot yes no 0.775 0.787 0.261 2e-94
Q9URX81315 Probable nucleoporin C890 yes no 0.787 0.844 0.231 1e-53
P381811502 Nucleoporin NUP170 OS=Sac yes no 0.772 0.725 0.206 2e-27
P400641391 Nucleoporin NUP157 OS=Sac no no 0.186 0.189 0.223 5e-08
>sp|O75694|NU155_HUMAN Nuclear pore complex protein Nup155 OS=Homo sapiens GN=NUP155 PE=1 SV=1 Back     alignment and function desciption
 Score =  354 bits (908), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 361/1348 (26%), Positives = 570/1348 (42%), Gaps = 237/1348 (17%)

Query: 56   PLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCP 115
            P +  +    LP  LVE++     + N + G+FP I RAW ++D+ +F+W ++   G   
Sbjct: 79   PEISSIRRVPLPPELVEQFGHM--QCNCMMGVFPPISRAWLTIDSDIFMWNYED-GGDLA 135

Query: 116  EYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCC----SGAGDGTDPYA 171
             + G  + I AVGL K K GIF   +++LL+LATPV+++++G+      +G+G   D  +
Sbjct: 136  YFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTGSGVLNDSLS 195

Query: 172  E-ISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY-KRCRKVC 229
              + L P P Y++P+D   +  IT TD GRI LAG+DG +YE+ Y   +GW+ +RCRK+ 
Sbjct: 196  GGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKIN 255

Query: 230  HTAGVGNVISRWIVPNV--FRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDG 287
            H+    +    ++VP++  F F   DPI+++  DN R +LY R+E+  +QV+ LG +G G
Sbjct: 256  HSKSSLS----FLVPSLLQFTFSEDDPILQIAIDNSRNILYTRSEKGVIQVYDLGQDGQG 311

Query: 288  PLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSD 347
              +  +  +N          G      R   RS    +V I+ +   ES    L+AV   
Sbjct: 312  MSRVASVSQNAI----VSAAGNIA---RTIDRSVFKPIVQIAVIENSESLDCQLLAVTHA 364

Query: 348  GRRMYLSTSASSGNSGTVGGVGGFNNHHFRPSCLKVVTTRPSPPLGVGGGLGFGAISLAG 407
            G R+Y ST               F     RP+ L +V  R  P        GF A S   
Sbjct: 365  GVRLYFSTCP-------------FRQPLARPNTLTLVHVRLPP--------GFSASSTVE 403

Query: 408  RNQSDDISLKVETAYYSAGTLVLSDASPPTMSSLIIVSKDPSSQSYPTGSLGTSARI--- 464
            +        KV  A YS G L+++ +       L  V+ D      P      +A +   
Sbjct: 404  KPS------KVHRALYSKGILLMAASENEDNDILWCVNHDTFPFQKPMMETQMTAGVDGH 457

Query: 465  SRALRESVTSLPVEGRMLSVT-DILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGKL 523
            S AL  ++  L V+  +  +  D +P+ D+   VQ                         
Sbjct: 458  SWAL-SAIDELKVDKIITPLNKDHIPITDSPVVVQ------------------------- 491

Query: 524  WARGDLSTQHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELN--SPRSILEDFFNRFG 581
                    QH+LP ++ V+ S  G +     RPVD LR L   N       +E FF    
Sbjct: 492  --------QHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQ 543

Query: 582  AGEAAAMCLMLAARIVHSENLIS----NAVAEKAAEAFV--------------------- 616
              +A A CL+LA      +  +S     A      EA +                     
Sbjct: 544  EDQACATCLILACSTAACDREVSAWATRAFFRYGGEAQMRFPTTLPPPSNVGPILGSPVY 603

Query: 617  ------------DPRLVGMPQLEGSN---------ALANTRTAAGGFSMGQVVQEAEPVF 655
                        +P  +G P   G           AL N  T A   S    V   E V+
Sbjct: 604  SSSPVPSGSPYPNPSFLGTPS-HGIQPPAMSTPVCALGNPATQATNMS---CVTGPEIVY 659

Query: 656  SGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLEN---KIRSLE 712
            SG + G+C+  SR++  +W+   +VV+    S N  +    SS   Q+LE+   +++ L+
Sbjct: 660  SGKHNGICIYFSRIMGNIWD-ASLVVERIFKSGNREITAIESSVPCQLLESVLQELKGLQ 718

Query: 713  KFLRCIRNQRRGLYGYVAGMGDLSGSI---LYGTGADSVAGDQSLIRNLFGSYSRNADSN 769
            +FL   RN +    G   G  + +  +   L G         Q + + L   +     S 
Sbjct: 719  EFLD--RNSQ--FAGGPLGNPNTTAKVQQRLIGFMRPENGNPQQMQQELQRKFHEAQLSE 774

Query: 770  GAGTSNKRQRLPYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDR 829
                   +Q +  S   LA  +LL +H  T +V      L+++L   TF  LV  ++   
Sbjct: 775  KISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQLKITTFKDLVIRDK--E 832

Query: 830  LATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAVTSDS 889
            L   LI++L+  Y   +    VD IS  L++ CP  +   D     A E L+R+    + 
Sbjct: 833  LTGALIASLINCYIRDNA--AVDGISLHLQDICPLLYSTDDAICSKANELLQRSRQVQNK 890

Query: 890  EEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDAFNDQ 949
             EKE + RE+     K+    DL  VC ++  +RFYE VV L L  A+  DP G   +  
Sbjct: 891  TEKERMLRESLKEYQKISNQVDLSNVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFY 950

Query: 950  IDAATRE-----YALVQRQQCYEIITSALRSL--KGDSSQREFGSPVRPAGPRSALDPAS 1002
                  E      A  +R   Y+ IT  L+ L  +  ++ +    P +P  P  + DP  
Sbjct: 951  KHGEPEEDIVGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNM 1010

Query: 1003 RKK-----YICQIVQLGVQSPDRIFHEYLYRTMIDLGLENELLEYGGPDLVPFLQSAGRE 1057
                    +  Q+++L  +S D +F   LY  +I + L ++LL+   P L P L    + 
Sbjct: 1011 LSNEEAGHHFEQMLKLSQRSKDELFSIALYNWLIQVDLADKLLQVASPFLEPHLVRMAK- 1069

Query: 1058 PIQEVRAVSGITSAASLMGQTGTPIPSNEAKYFDLLARYYVLKRQHLLAAHVLLRLAERR 1117
                                    +  N  +Y DLL RYY   R    AA VL RLA+  
Sbjct: 1070 ------------------------VDQNRVRYMDLLWRYYEKNRSFSNAARVLSRLADMH 1105

Query: 1118 STDEKDAPTLDQRRQYLSNAILQAKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQT 1177
            ST+     +L QR +Y++ AIL AK++T   S+      A D   L  LE K+ V R Q 
Sbjct: 1106 STE----ISLQQRLEYIARAILSAKSSTAISSI------AADGEFLHELEEKMEVARIQL 1155

Query: 1178 KIKDELEAIASSLETSVDMSESTQNGSAPDSSSTTDANYAKIVREKAKELSLDLKSITQL 1237
            +I++ L+             + + + S  D+ S  D+               +L  IT+L
Sbjct: 1156 QIQETLQ------------RQYSHHSSVQDAVSQLDS---------------ELMDITKL 1188

Query: 1238 YNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQ------ALSKGGIAEACS 1291
            Y E+A PF+L E  L +++ A Y+   D  +++  W  +I++       LS      A S
Sbjct: 1189 YGEFADPFKLAECKLAIIHCAGYS---DPILVQTLWQDIIEKELSDSVTLSSSDRMHALS 1245

Query: 1292 VLKRVGSHMYPGDGAVLPLDTLCLHLEK 1319
            +   +   +Y G     PLD +   LE+
Sbjct: 1246 LKIVLLGKIYAGTPRFFPLDFIVQFLEQ 1273
Essential component of nuclear pore complex. Nucleoporins may be involved both in binding and translocating proteins during nucleocytoplasmic transport.
Homo sapiens (taxid: 9606)
>sp|Q99P88|NU155_MOUSE Nuclear pore complex protein Nup155 OS=Mus musculus GN=Nup155 PE=2 SV=1 Back     alignment and function description
>sp|P37199|NU155_RAT Nuclear pore complex protein Nup155 OS=Rattus norvegicus GN=Nup155 PE=1 SV=1 Back     alignment and function description
>sp|Q9URX8|NG06_SCHPO Probable nucleoporin C890.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC890.06 PE=3 SV=3 Back     alignment and function description
>sp|P38181|NU170_YEAST Nucleoporin NUP170 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NUP170 PE=1 SV=1 Back     alignment and function description
>sp|P40064|NU157_YEAST Nucleoporin NUP157 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NUP157 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1410
3594725951496 PREDICTED: nuclear pore complex protein 0.962 0.907 0.811 0.0
2555700791490 protein with unknown function [Ricinus c 0.958 0.906 0.799 0.0
3565245491486 PREDICTED: nuclear pore complex protein 0.955 0.906 0.785 0.0
3565130561485 PREDICTED: nuclear pore complex protein 0.955 0.907 0.781 0.0
3575213111484 Nuclear pore complex protein Nup155 [Med 0.954 0.907 0.776 0.0
4494490941492 PREDICTED: nuclear pore complex protein 0.958 0.906 0.721 0.0
87782271475 F10B6.25 [Arabidopsis thaliana] 0.943 0.902 0.732 0.0
306840281464 nucleoporin 155 [Arabidopsis thaliana] g 0.943 0.909 0.732 0.0
4495155121304 PREDICTED: LOW QUALITY PROTEIN: nuclear 0.906 0.980 0.725 0.0
3571133341469 PREDICTED: nuclear pore complex protein 0.943 0.906 0.634 0.0
>gi|359472595|ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup155-like [Vitis vinifera] Back     alignment and taxonomy information
 Score = 2278 bits (5903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1124/1385 (81%), Positives = 1234/1385 (89%), Gaps = 28/1385 (2%)

Query: 1    MSSEEEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTTHPREWPPLVEV 60
            MS ++EI++RDVTNAGLVVSDRI R+VA+Q D+EEALEASRY SHPY+THPREWPPLVEV
Sbjct: 1    MSWDDEIVVRDVTNAGLVVSDRINRDVAAQTDLEEALEASRYTSHPYSTHPREWPPLVEV 60

Query: 61   VDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGE 120
            +DTW+LP VL+ERYNAAGGEG ALCG+FPEIRRAWASVDNSLFLWRFDKWDGQCPEY+GE
Sbjct: 61   MDTWELPPVLIERYNAAGGEGTALCGVFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGE 120

Query: 121  EQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPE 180
            EQ ICAVGLAKSKPG+FVEAIQYLL+LATPVELILVGVCC G GDGTDPY E+SLQ LPE
Sbjct: 121  EQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCCGRGDGTDPYEEVSLQLLPE 180

Query: 181  YTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWYKRCRKVCHTAGVGNVISR 240
            YT+PSDGVTMTCITCTDKGRI LAGRDG+IYE+ YTTGSGW KRCRKVC T G+G+VISR
Sbjct: 181  YTIPSDGVTMTCITCTDKGRIFLAGRDGHIYEMHYTTGSGWNKRCRKVCLTVGLGSVISR 240

Query: 241  WIVPNVFRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFN 300
            WIVP VF+FGAVDPIVE+V DNER +LYARTEEMKLQVFVLGP GDGPLKKVAEER+L N
Sbjct: 241  WIVPTVFKFGAVDPIVEMVVDNERHILYARTEEMKLQVFVLGPKGDGPLKKVAEERSLIN 300

Query: 301  QRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMYLSTSASSG 360
            Q+D H+GGRQ+ G R  +RS KPS++ ISPLSTLESKWLHLVAVLSDGRRMYLST+ SSG
Sbjct: 301  QKDAHYGGRQSAGSRPSNRSVKPSIICISPLSTLESKWLHLVAVLSDGRRMYLSTAPSSG 360

Query: 361  NSGTVGGVGGFNNHHFRPSCLKVVTTRPSPPLGVGGGLGFGAISLAGRNQSDDISLKVET 420
            NSG VGG+ GFN  H +P+CLKVVTTRPSPPLGV GGL FGAISL+ R Q++D++LKVE+
Sbjct: 361  NSGAVGGLSGFNTSHHKPNCLKVVTTRPSPPLGVTGGLAFGAISLSSRTQNEDLALKVES 420

Query: 421  AYYSAGTLVLSDASPPTMSSLIIVSKDPSSQSYPTGSLGTSARISRALRESVTSLPVEGR 480
            AYYSAG LVLSD+SPPTMSSL+IV +D S+QS  +G LGT+AR SRALRESV+SLPVEGR
Sbjct: 421  AYYSAGALVLSDSSPPTMSSLLIVGRDSSTQSSVSGGLGTTARTSRALRESVSSLPVEGR 480

Query: 481  MLSVTDILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRI 540
            ML V D+LP PD A TVQSLYSELEF GFE SGESCEK+ GKLWARGDLSTQHILPRRRI
Sbjct: 481  MLFVADVLPSPDIAATVQSLYSELEFSGFESSGESCEKACGKLWARGDLSTQHILPRRRI 540

Query: 541  VVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSE 600
            VVFSTMGMMEVVFNRPVDILRRL E NSPRS+LEDFFNRFGAGEAAAMCLMLAA+IVH+E
Sbjct: 541  VVFSTMGMMEVVFNRPVDILRRLLESNSPRSLLEDFFNRFGAGEAAAMCLMLAAKIVHTE 600

Query: 601  NLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQEAEPVFSGAYE 660
            NLISN V+EKAAEAF DPR+VGMPQLEGS+A +NTRTAAGGFSMGQVVQEAEP+FSGA+E
Sbjct: 601  NLISNVVSEKAAEAFEDPRVVGMPQLEGSSAFSNTRTAAGGFSMGQVVQEAEPIFSGAHE 660

Query: 661  GLCLCASRLLFPLWELPVMVVKG-----DAISENGVVVCRLSSGAMQVLENKIRSLEKFL 715
            GLCLC+SRLL P+WELPVMV+KG     +A+SE+G+V CRLSSGAMQVLENKIR+LEKFL
Sbjct: 661  GLCLCSSRLLLPVWELPVMVMKGGLDTSNAMSESGIVSCRLSSGAMQVLENKIRALEKFL 720

Query: 716  RCIRNQRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIRNLFGSYSRNADSNGAGTSN 775
            R  RNQRRGLYG VAG+GDL+GSILYGTG+D  AGD S++RNLFG+YSR+ +    GTSN
Sbjct: 721  RSRRNQRRGLYGCVAGLGDLTGSILYGTGSDLGAGDNSMVRNLFGAYSRSIEPGDGGTSN 780

Query: 776  KRQRLPYSPAELAAIEL----------------------LSQHHVTRLVQGFDANLRQEL 813
            KRQRLPYSPAELAA+E+                      L QHHVTRLVQGFD NLRQEL
Sbjct: 781  KRQRLPYSPAELAAMEVRAMECIRQLLLRSAEALFLLQQLCQHHVTRLVQGFDVNLRQEL 840

Query: 814  VQLTFCQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKF 873
            VQLTF QLVCSEEGDRLATRLIS+LMEYYT PDGRGTVDDIS RLREGCPSY+KESDYKF
Sbjct: 841  VQLTFHQLVCSEEGDRLATRLISSLMEYYTGPDGRGTVDDISARLREGCPSYYKESDYKF 900

Query: 874  FLAVECLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPL 933
            +LAVE LERAAVTSD+EEKENLAREAFNFLSKVPESADLRTVC+RFEDLRFYEAVVRLPL
Sbjct: 901  YLAVEFLERAAVTSDTEEKENLAREAFNFLSKVPESADLRTVCKRFEDLRFYEAVVRLPL 960

Query: 934  QKAQALDPAGDAFNDQIDAATREYALVQRQQCYEIITSALRSLKGDSSQREFGSPVRPAG 993
            QKAQALDPAGDAFN+Q+DA TRE+AL Q +QCYEIITSALRSLKG++SQ+EFGSPVRPA 
Sbjct: 961  QKAQALDPAGDAFNEQLDAGTREHALAQLEQCYEIITSALRSLKGEASQKEFGSPVRPAA 1020

Query: 994  PRSALDPASRKKYICQIVQLGVQSPDRIFHEYLYRTMIDLGLENELLEYGGPDLVPFLQS 1053
             RS LD ASR KYI QIVQLGVQS DR+FHEYLYRTMIDLGLENELLEYGGPDLVPFLQ+
Sbjct: 1021 -RSTLDQASRDKYIRQIVQLGVQSSDRVFHEYLYRTMIDLGLENELLEYGGPDLVPFLQN 1079

Query: 1054 AGREPIQEVRAVSGITSAASLMGQTGTPIPSNEAKYFDLLARYYVLKRQHLLAAHVLLRL 1113
            AGRE +QEVRAVS ITS  S +G  G PIPSN+ KYFDLLARYYVLKRQH+LAAHVLLRL
Sbjct: 1080 AGRESLQEVRAVSSITSTRSPVGLFGAPIPSNQTKYFDLLARYYVLKRQHVLAAHVLLRL 1139

Query: 1114 AERRSTDEKDAPTLDQRRQYLSNAILQAKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVL 1173
            AERRSTD  D PTL+QRRQYLSNA+LQAKNA+NSD LVGS RGA DNGLLDLLEGKLAVL
Sbjct: 1140 AERRSTDAGDVPTLEQRRQYLSNAVLQAKNASNSDGLVGSVRGASDNGLLDLLEGKLAVL 1199

Query: 1174 RFQTKIKDELEAIASSLETSVDMSESTQNGSAPDSSSTTDANYAKIVREKAKELSLDLKS 1233
            RFQ KIK ELEAIAS LE+S   SES  N S  +S+   D N+A  V+EKA+E+SLDLKS
Sbjct: 1200 RFQIKIKGELEAIASRLESSNVTSESVLNESCSESNLNADTNFANTVQEKAREISLDLKS 1259

Query: 1234 ITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGGIAEACSVL 1293
            ITQLYNEYAVPFELWEICLEMLYFANY+GDADSSI+RETWARLIDQALSKGGIAEACSVL
Sbjct: 1260 ITQLYNEYAVPFELWEICLEMLYFANYSGDADSSIVRETWARLIDQALSKGGIAEACSVL 1319

Query: 1294 KRVGSHMYPGDGAVLPLDTLCLHLEKAALERLDSQVESVGDEDIARALLAACKGAAEPVL 1353
            KRVGSH+YPGDGAVLPLDTLCLHLEKAALERL S VE VGDED+ RALLAACKGA EPVL
Sbjct: 1320 KRVGSHIYPGDGAVLPLDTLCLHLEKAALERLASGVEPVGDEDVVRALLAACKGATEPVL 1379

Query: 1354 NTYDQ 1358
            NTY+Q
Sbjct: 1380 NTYEQ 1384

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255570079|ref|XP_002526002.1| protein with unknown function [Ricinus communis] gi|223534734|gb|EEF36426.1| protein with unknown function [Ricinus communis] Back     alignment and taxonomy information
>gi|356524549|ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max] Back     alignment and taxonomy information
>gi|356513056|ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max] Back     alignment and taxonomy information
>gi|357521311|ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicago truncatula] gi|355524966|gb|AET05420.1| Nuclear pore complex protein Nup155 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449449094|ref|XP_004142300.1| PREDICTED: nuclear pore complex protein Nup155-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|8778227|gb|AAF79236.1|AC006917_21 F10B6.25 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30684028|ref|NP_172938.2| nucleoporin 155 [Arabidopsis thaliana] gi|332191114|gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449515512|ref|XP_004164793.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore complex protein Nup155-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|357113334|ref|XP_003558458.1| PREDICTED: nuclear pore complex protein Nup155-like isoform 2 [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1410
TAIR|locus:20068021464 NUP155 "nucleoporin 155" [Arab 0.943 0.908 0.692 0.0
UNIPROTKB|F1NNT91348 NUP155 "Uncharacterized protei 0.200 0.209 0.354 1e-83
UNIPROTKB|F1NPS01394 NUP155 "Uncharacterized protei 0.200 0.203 0.354 1.4e-83
UNIPROTKB|O756941391 NUP155 "Nuclear pore complex p 0.237 0.240 0.329 2.5e-79
UNIPROTKB|F1MNT11391 NUP155 "Uncharacterized protei 0.237 0.240 0.337 6.6e-79
MGI|MGI:21811821391 Nup155 "nucleoporin 155" [Mus 0.200 0.203 0.354 1.1e-77
UNIPROTKB|F6XTD91390 NUP155 "Uncharacterized protei 0.200 0.203 0.354 2.2e-77
UNIPROTKB|D4A0V41390 Nup155 "Nuclear pore complex p 0.200 0.203 0.354 3.9e-77
UNIPROTKB|F1SN951460 NUP155 "Uncharacterized protei 0.200 0.193 0.349 1.3e-76
RGD|6211991390 Nup155 "nucleoporin 155" [Ratt 0.239 0.243 0.327 6.9e-76
TAIR|locus:2006802 NUP155 "nucleoporin 155" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 4821 (1702.1 bits), Expect = 0., P = 0.
 Identities = 956/1381 (69%), Positives = 1100/1381 (79%)

Query:     1 MSSEEEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTTHPREWPPLVEV 60
             MS ++EI+MRDVT+AG+ + DRIGRE ASQLD+EEALEASRYASHPY+THPREWPPL+EV
Sbjct:     1 MSQDDEIVMRDVTSAGICIGDRIGREAASQLDLEEALEASRYASHPYSTHPREWPPLIEV 60

Query:    61 VDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGE 120
              +TW+LP+VL+ERYN AGGEG ALCGIFPEIRRAWASVDNSLFLWRFDK DGQCPEY+GE
Sbjct:    61 GETWELPSVLIERYNTAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKRDGQCPEYSGE 120

Query:   121 EQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPE 180
             EQ ICAVGLAK +PG+FVEAIQYLL+LATPVEL+LVGVCC+   DG DPYAEIS+QPLP+
Sbjct:   121 EQAICAVGLAKCRPGVFVEAIQYLLVLATPVELVLVGVCCTEGPDGRDPYAEISVQPLPD 180

Query:   181 YTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWYKRCRKVCHTAGVGNVISR 240
             YT+ SDGVTMTC+TCT+KGRI +AGRDG+IYELLYTTGSGW KRCRKVC TAGVG++ISR
Sbjct:   181 YTISSDGVTMTCVTCTNKGRIFMAGRDGHIYELLYTTGSGWNKRCRKVCLTAGVGSMISR 240

Query:   241 WIVPNVFRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFN 300
             W+VPNVF+FGAVDP+VE+V DNERQ+LYARTEEMKLQ +V GPNG+GPLKKVAEERNL N
Sbjct:   241 WVVPNVFKFGAVDPVVEMVVDNERQILYARTEEMKLQAYVSGPNGEGPLKKVAEERNLLN 300

Query:   301 QRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMYLXXXXXXX 360
             Q+D   G RQ+       RS KPS+VSISPLS LESKWLHLVA LSDGRRMYL       
Sbjct:   301 QKDLSQGNRQSA---VAGRSNKPSIVSISPLSMLESKWLHLVAALSDGRRMYLSTSSSGS 357

Query:   361 XXXXXXXXXXFNNHHFRPSCLKVVTTRXXXXXXXXXXXXXXXXXXXXRNQSDDISLKVET 420
                       FNNH   P+CLKVV+TR                    R Q+DD+S+K+ET
Sbjct:   358 GSTISFSG--FNNHRQTPNCLKVVSTRPSPPLGVGVGLGFGAASVAGRTQNDDLSMKIET 415

Query:   421 AYYSAGTLVLSDASPPTMSSLIIVSKDPSSQSYPTGSLGTSARISRALRESVTSLPVEGR 480
             AYYS GTLVLSD+SPP MSSL++VS+D S  S    S G S+R SRALRE V+SLP+EGR
Sbjct:   416 AYYSVGTLVLSDSSPPAMSSLLVVSRDSSVHSQAGSSSGPSSRSSRALREVVSSLPIEGR 475

Query:   481 MLSVTDILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRI 540
             ML V D+LP PDTA T+QSLYSELE+CG E+SGES EK+ GKLWAR DLSTQHILPRR+I
Sbjct:   476 MLFVADVLPSPDTAATIQSLYSELEYCGVEVSGESYEKACGKLWARSDLSTQHILPRRKI 535

Query:   541 VVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSE 600
             VVF+TMGMME+VFNRPVDILRRL E NSPRS+LEDFF RFG GEAAAMCLMLAARI++ E
Sbjct:   536 VVFTTMGMMELVFNRPVDILRRLLESNSPRSLLEDFFTRFGVGEAAAMCLMLAARIINFE 595

Query:   601 NLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQEAEPVFSGAYE 660
             +LISN VA+KAAEAF DPR+VGMPQ +GS+ L+NTRTA GGFSMGQVVQEAEP+FSGA+E
Sbjct:   596 DLISNIVADKAAEAFEDPRIVGMPQFDGSSGLSNTRTATGGFSMGQVVQEAEPIFSGAHE 655

Query:   661 GLCLCASRLLFPLWELPVMVVK--GDAISENGVVVCRLSSGAMQVLENKIRSLEKFLRCI 718
             GLCLC SRLLFPLWELPVM  K   D +SE+GVV+CRLS+ AM VLE+KIRSLEKFLR  
Sbjct:   656 GLCLCTSRLLFPLWELPVMSKKTSSDTMSEDGVVICRLSTSAMHVLESKIRSLEKFLRSR 715

Query:   719 RNQRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIRNLFGSYSRNADSNGAGTSNKRQ 778
             RNQRRGLYG VAG+GD++GSILYGTG++  A +++++RNLFG+YS     NG  ++NKRQ
Sbjct:   716 RNQRRGLYGCVAGLGDVTGSILYGTGSELGATERNMVRNLFGAYS-----NGGESANKRQ 770

Query:   779 RLPYSPAELAAIE----------------------LLSQHHVTRLVQGFDANLRQELVQL 816
             RLPYSPAELAA E                      LLSQHHV RLVQ  DANL+Q LVQL
Sbjct:   771 RLPYSPAELAATEVRAMECIRQLLLRSAEALFLLQLLSQHHVARLVQELDANLKQALVQL 830

Query:   817 TFCQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLA 876
             TF QLVCSEEGD++ATRLISA+MEYYT  DGRGTVDDIS RLREGCPSYFKESDYKF+LA
Sbjct:   831 TFHQLVCSEEGDQIATRLISAVMEYYTGSDGRGTVDDISPRLREGCPSYFKESDYKFYLA 890

Query:   877 VECLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKA 936
             VE LERAA+TSD+EEKEN+AREAF+FLSKVP SADL+TVC+RFEDLRFYEAVV LPLQKA
Sbjct:   891 VERLERAALTSDAEEKENVAREAFSFLSKVPGSADLQTVCKRFEDLRFYEAVVCLPLQKA 950

Query:   937 QALDPAGDAFNDQIDAATREYALVQRQQCYEIITSALRSLKGDSSQREFGSPVRPAGPRS 996
             QALDPAGDAFNDQ+DA+ RE+AL QR+QCYEII +ALRSL          SP+  A P  
Sbjct:   951 QALDPAGDAFNDQLDASIREHALAQRKQCYEIIANALRSL---------ASPL--ASP-- 997

Query:   997 ALDPASRKKYICQIVQLGVQSPDRIFHEYLYRTMIDXXXXXXXXXXXXPDLVPFLQSAGR 1056
              LD ASR +YICQIV LGVQS DR F EYLY+ MI+            PDLVPFLQ+AG 
Sbjct:   998 TLDEASRSQYICQIVHLGVQSTDRAFREYLYKAMIELHLENELLEYGGPDLVPFLQNAGS 1057

Query:  1057 EPIQEVRAVSGITSAASLMGQTGTPIPSNEAKYFDLLARYYVLKRQHXXXXXXXXXXXXX 1116
                 +V AVS   + +S +G +GT I S++AKYFDLLA+YYV KRQH             
Sbjct:  1058 HSESQVGAVS---TGSSPLGHSGTQISSDQAKYFDLLAKYYVSKRQHVLAAHVFLRLAER 1114

Query:  1117 XSTDEKDAPTLDQRRQYLSNAILQAKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQ 1176
              +    D+PTL++RR  LS A+LQAKNA+NSD LVGS +G  D+GLLDLLEGKLAVL+FQ
Sbjct:  1115 RAISLGDSPTLERRRDDLSQAVLQAKNASNSDGLVGSAQGVSDSGLLDLLEGKLAVLQFQ 1174

Query:  1177 TKIKDELEAIASSLETSVDMSESTQNGSAPDSSSTTDANYAKIVREKAKELSLDLKSITQ 1236
              KI+D+LEAIAS+ E+SV M +S QNG   D  S+ D N A    E A E+S +LKS+TQ
Sbjct:  1175 IKIRDKLEAIASNFESSVAMQDSDQNGQVLDGDSSDDTNLANAANEMAMEVSSELKSVTQ 1234

Query:  1237 LYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGGIAEACSVLKRV 1296
             LYNEYAVPFELWEICLEMLYFANY+GDADSSIIRETWARLIDQALS+GGI EAC+VLKRV
Sbjct:  1235 LYNEYAVPFELWEICLEMLYFANYSGDADSSIIRETWARLIDQALSQGGIREACAVLKRV 1294

Query:  1297 GSHMYPGDGAVLPLDTLCLHLEKAALERLDSQVESVGDEDIXXXXXXXXXXXXEPVLNTY 1356
             GSH+YPGDG VLPLD LCLHLE+AALER + ++E+V DEDI            EPVLN Y
Sbjct:  1295 GSHIYPGDGVVLPLDVLCLHLERAALERSE-RIENVRDEDIAKALLAACKGAAEPVLNAY 1353

Query:  1357 D 1357
             D
Sbjct:  1354 D 1354
GO:0005634 "nucleus" evidence=ISM
GO:0005643 "nuclear pore" evidence=IEA;ISS
GO:0006913 "nucleocytoplasmic transport" evidence=IEA;ISS
GO:0017056 "structural constituent of nuclear pore" evidence=IEA
GO:0005487 "nucleocytoplasmic transporter activity" evidence=ISS
GO:0009507 "chloroplast" evidence=IDA
GO:0005730 "nucleolus" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0009506 "plasmodesma" evidence=IDA
GO:0001510 "RNA methylation" evidence=RCA
UNIPROTKB|F1NNT9 NUP155 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NPS0 NUP155 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|O75694 NUP155 "Nuclear pore complex protein Nup155" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1MNT1 NUP155 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2181182 Nup155 "nucleoporin 155" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F6XTD9 NUP155 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|D4A0V4 Nup155 "Nuclear pore complex protein Nup155" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1SN95 NUP155 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|621199 Nup155 "nucleoporin 155" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1410
pfam08801411 pfam08801, Nucleoporin_N, Nup133 N terminal like 7e-49
pfam03177559 pfam03177, Nucleoporin_C, Non-repetitive/WGA-negat 8e-46
COG53081263 COG5308, NUP170, Nuclear pore complex subunit [Int 2e-38
>gnl|CDD|220023 pfam08801, Nucleoporin_N, Nup133 N terminal like Back     alignment and domain information 
 Score =  179 bits (456), Expect = 7e-49
 Identities = 112/448 (25%), Positives = 167/448 (37%), Gaps = 80/448 (17%)

Query: 54  WPPLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRF------ 107
                +V     LP  ++E  N+   E     G+FPEI RAW ++DN LFLW +      
Sbjct: 2   ENDPYKVSKLPPLPDEVLEELNS--TEAPTKGGLFPEIGRAWITIDNKLFLWNYNSTSPS 59

Query: 108 --DKWDGQCPE--YTGEEQVICAVGLAKSKPG--IFVEAIQYLLILATPVELILVGVCCS 161
             D  D   P     G +  I  VGL K K G  +F E+I + L+LATP +++L+GV   
Sbjct: 60  LSDDSDFLLPPSIPDGIKHTIPGVGLVKPKSGRIVFWESISHALVLATPRDIVLLGV--- 116

Query: 162 GAGDGTDPYAEISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDG--NIYELLYTTGS 219
                     E+ L          +      I  T  GRI   G      I EL Y   S
Sbjct: 117 --------TNELKLLNGELSVSVVNAEPAGIILSTSTGRIFFLGIRDSIGIPELQYQQLS 168

Query: 220 GWYKRCRKVCHTAGVGNVISRWIVPNVFRFGAVDPIVELVFDNER-QLLYARTEEMKLQV 278
               +C K+  T+      S  +VP+  R      IV L  D+ R +LLY  T +  ++V
Sbjct: 169 S---KCSKIGLTSA-SIFSS--LVPSSDR-----EIVSLRVDSSRGRLLYTLTSKGTIRV 217

Query: 279 FVLGPNGDGPLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKW 338
           + L P+G+  +++V     +            +T       S    ++ ISP+ + ES  
Sbjct: 218 WDLSPSGEKLVREVDIYEIILRDLQESIPKSAST-----LSSKSLKILDISPIPSGESSL 272

Query: 339 LHLVAVLSDGRRMYLSTSASSGNSGTVGGVGGFNNHHFRPSCLKVVTTRPSPPLGVGGGL 398
           L LVA+ S+G R+Y S                          L +V+ R  P        
Sbjct: 273 LLLVAITSNGVRLYFSLL------------------------LTLVSVRLPPS------- 301

Query: 399 GFGAISLAGRNQSDDISLKVETAYYSAGTLVLSDASPPTMSSLIIVSKDPSSQSYPTGSL 458
               IS      S  + +  E+A YS G  +    SP   + ++ VS             
Sbjct: 302 -SVTISSTHPLSSYLLPVTSESAIYSPGLFL---PSPGDTAFVVFVSAVVLGSLSSFLKS 357

Query: 459 GTSAR-ISRALRESVTSLPVEGRMLSVT 485
             S   I     E    L     +  + 
Sbjct: 358 SYSQSKIVFPKWEDAIRLRSGADVQILG 385

Nup133 is a nucleoporin that is crucial for nuclear pore complex (NPC) biogenesis. The N terminal forms a seven-bladed beta propeller structure. This family now contains other sized nucleoporins, including Nup155, Nup8, Nuo132, Nup15 and Nup170. Length = 411
>gnl|CDD|217408 pfam03177, Nucleoporin_C, Non-repetitive/WGA-negative nucleoporin C-terminal Back     alignment and domain information
>gnl|CDD|227624 COG5308, NUP170, Nuclear pore complex subunit [Intracellular trafficking and secretion] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1410
KOG19001311 consensus Nuclear pore complex, Nup155 component ( 100.0
COG53081263 NUP170 Nuclear pore complex subunit [Intracellular 100.0
PF08801422 Nucleoporin_N: Nup133 N terminal like; InterPro: I 100.0
PF03177586 Nucleoporin_C: Non-repetitive/WGA-negative nucleop 100.0
KOG41211128 consensus Nuclear pore complex, Nup133 component ( 97.54
KOG19001311 consensus Nuclear pore complex, Nup155 component ( 97.38
KOG45211480 consensus Nuclear pore complex, Nup160 component [ 95.36
cd00200289 WD40 WD40 domain, found in a number of eukaryotic 93.79
cd00200289 WD40 WD40 domain, found in a number of eukaryotic 93.32
PF11715547 Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 91.76
KOG0319775 consensus WD40-repeat-containing subunit of the 18 91.38
KOG0646476 consensus WD40 repeat protein [General function pr 90.7
PLN00181793 protein SPA1-RELATED; Provisional 89.93
KOG0289506 consensus mRNA splicing factor [General function p 89.76
KOG0646476 consensus WD40 repeat protein [General function pr 89.73
KOG0315311 consensus G-protein beta subunit-like protein (con 88.88
KOG0291893 consensus WD40-repeat-containing subunit of the 18 88.15
KOG0279315 consensus G protein beta subunit-like protein [Sig 86.01
KOG0274537 consensus Cdc4 and related F-box and WD-40 protein 82.87
KOG0319775 consensus WD40-repeat-containing subunit of the 18 80.82
KOG0308735 consensus Conserved WD40 repeat-containing protein 80.03
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information 
Probab=100.00  E-value=2.3e-190  Score=1752.57  Aligned_cols=1195  Identities=31%  Similarity=0.435  Sum_probs=904.8

Q ss_pred             cchhccccccccchhhhhhhhhhccccCHHHHHhhccccCCCCCCCCCCCCCcccccccccCCHHHHHHHHhcCCccccc
Q 000580            5 EEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTTHPREWPPLVEVVDTWDLPTVLVERYNAAGGEGNAL   84 (1410)
Q Consensus         5 ~~~~~~~~~~a~~~~~d~~~~d~~~~pdl~~~~~~~~~~~~~y~~~~~~w~p~~~~~~~~~lP~ei~e~~n~~~~q~~~~   84 (1410)
                      .+.+..++....-...|++.+-..+-.++.+.+ +..|.+++++....+|+||.+. .+++||+||+|||+++  +|+|.
T Consensus         8 ~~~v~~hv~~~~~~~~~~i~~~t~~dl~~~p~~-gl~~~~~~~~~~L~~~~p~~~~-~v~~IP~el~eq~~~~--~~~~~   83 (1311)
T KOG1900|consen    8 VSGVEGHVTELLVLGSDFIGRLTMSDLKLTPVL-GLGYAFSYEVRGLPEFRPFYRQ-QVVNIPDELLEQFSNI--ECKTD   83 (1311)
T ss_pred             hhhhhhhhhhHHHhhhhhhhhhhhcCCCCCccc-ccccccccccCCCccCCceeec-ccccCCHHHHHHhcCc--ceeee
Confidence            344445554444444555555444443444444 4578889999888899999985 9999999999999999  99999


Q ss_pred             cccccccceeEEEEeCeEEEEecCCCCCCCccccCCCcceEEEEeeccCCCcccccceEEEEEeccceEEEEEeeecCCC
Q 000580           85 CGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAG  164 (1410)
Q Consensus        85 mGlFPEI~rAW~tIDn~L~LW~Y~~~~~~~~~fd~~~~~I~aV~LvkPKpgVF~~~I~~lLvvaT~~~I~Llgv~~~~~~  164 (1410)
                      |||||||+|||+||||+||||||++++ ++.+|||++|+|++|||||||||||+++|+||||||||+||+||||+++...
T Consensus        84 mGiFpeI~RaWiTiDn~L~lWny~~~~-e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~  162 (1311)
T KOG1900|consen   84 MGIFPEIGRAWITIDNNLFLWNYESDN-ELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFT  162 (1311)
T ss_pred             eccchhhcceEEEeCCeEEEEEcCCCC-ccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEecccc
Confidence            999999999999999999999999844 4589999999999999999999999999999999999999999999998655


Q ss_pred             CCCCCCceeEEeeCCCeEeecCCeeEEEEEecCCCCEEEeecCCCEEEEEEecCCccc-cccceeeeccCcccccccccc
Q 000580          165 DGTDPYAEISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY-KRCRKVCHTAGVGNVISRWIV  243 (1410)
Q Consensus       165 ~~~~~~~~l~L~~~~~~sv~tdg~~v~~I~gt~~GRIF~gG~DG~lyEl~Y~~~~~Wf-~rc~kinht~g~~S~~~~~~l  243 (1410)
                      +      +...+++. |+|++||++|+||++|++|||||+|+||||||+.||.++||| +||+|||||+|..|.    +|
T Consensus       163 ~------~~~~f~~~-~~i~~dg~~V~~I~~t~nGRIF~~G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~----lv  231 (1311)
T KOG1900|consen  163 G------ELSIFNTS-FKISVDGVSVNCITYTENGRIFFAGRDGNLYELVYQAEDGWFGSRCRKICLTKSVLSS----LV  231 (1311)
T ss_pred             C------cccccccc-eeeecCCceEEEEEeccCCcEEEeecCCCEEEEEEeccCchhhcccccccCchhHHHH----hh
Confidence            4      56788875 999999999999999999999999999999999999999999 999999999987666    47


Q ss_pred             ccccc--cCCCCceEEEEEeCCCceEEEEcCCCeEEEEEeCCCCCCCcceeeeecccccccccccCCccccCcCCCCCCC
Q 000580          244 PNVFR--FGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRST  321 (1410)
Q Consensus       244 Ps~~~--~~~~d~Ivqi~vD~sR~iLYtLs~~s~I~vY~Lg~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (1410)
                      |++++  ++.+|+|.||+||++|+|||+|+++|+|++|+||++|...++.+ ++.    +..+..++.+. ..+ .+.+.
T Consensus       232 Ps~~~~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~~G~~~~r~~-~~~----~~~i~~qa~~~-~~~-~~~s~  304 (1311)
T KOG1900|consen  232 PSLLSVPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGGNGLGGPRFV-SVS----RNYIDVQALSL-KNP-LDDSV  304 (1311)
T ss_pred             hhhhcCCCCCCCcceeeEeccccceeeeeccCceEEEEEccCCCccceeee-ehh----HHHHHHHhhhc-ccc-CCCcc
Confidence            77643  35789999999999999999999999999999999998874443 332    22222222111 112 77889


Q ss_pred             CCcEEEEEecCccCccceEEEEEecCceEEEEecCCCCCCCCC-----c---cCCCCCCCCCCCCCceEEEEEeCCCCCC
Q 000580          322 KPSVVSISPLSTLESKWLHLVAVLSDGRRMYLSTSASSGNSGT-----V---GGVGGFNNHHFRPSCLKVVTTRPSPPLG  393 (1410)
Q Consensus       322 ~~~IVsI~pIs~~ES~~l~LVAVT~~G~RlYfs~~~~~~~s~~-----~---~~~~g~~~~~~~P~~L~lvhVR~PP~~~  393 (1410)
                      +++||+|+||++.||+++||||+|++|+||||+++++..+...     .   ++-.++......|..|++.|+|.+|+..
T Consensus       305 f~~IvsI~~l~~~es~~l~LvA~ts~GvRlYfs~s~~r~~~~~~~~~s~~~~p~~~~~~q~s~~p~pl~v~~~~~~~~~t  384 (1311)
T KOG1900|consen  305 FFSIVSISPLSASESNDLHLVAITSTGVRLYFSTSSGRQSTSAPFLCSVKHTPTSNSLEQTSISPPPLQVQNVRSSKGYT  384 (1311)
T ss_pred             cceeEEecccCcccccceeEEEEecCCeEEEEeccCCCcccccccccccCCCCCCCCccccccCCCCceeeeeeccCCcc
Confidence            9999999999999999999999999999999999875322100     0   0000001112345556666666655532


Q ss_pred             CCCCCCccccccccCCCCCcccceeeeeEecCCcEEEEecCCCCcceEEEEecCCCCCCCCCCCCCccccccccceeeEE
Q 000580          394 VGGGLGFGAISLAGRNQSDDISLKVETAYYSAGTLVLSDASPPTMSSLIIVSKDPSSQSYPTGSLGTSARISRALRESVT  473 (1410)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~~v~~a~Ys~G~~l~~~~~~~~~d~L~~~s~d~~~~~~~~~~~~~~~~~~~~l~E~~~  473 (1410)
                      +.           +.+.   .+..++...|.+++..+-+..... ..+...+...+.-.  +....-.....+...|..+
T Consensus       385 ~~-----------a~t~---~~~~~~~~~~~~~t~~~~~~~k~~-~~lt~~~~~~~~~~--s~~~~~l~~s~~~~g~~~~  447 (1311)
T KOG1900|consen  385 PA-----------ASTI---NSDNIELICVAKRTVLLLTLSKSS-SSLTAIALVESVLL--SCRSDELFVSAPDYGELKT  447 (1311)
T ss_pred             cc-----------ceee---cCCCceEEEEcccchhcccccccc-cceEeecccceeee--cccccceeeeccchhhhhh
Confidence            21           1111   122333444444433222221111 11111111111100  0000000011223334444


Q ss_pred             eeccCCeeEEEeecCCCCCcccccccccccccccccccCCCcccccCCccccCCcccccccCCCceEEEEcCCceEEEEE
Q 000580          474 SLPVEGRMLSVTDILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRIVVFSTMGMMEVVF  553 (1410)
Q Consensus       474 ~~~l~g~~~~i~~v~~~p~~~~~~~~l~~~~e~~~~~~~~~~~~k~~p~~~~~nela~Q~~~ppr~f~vLTn~Gi~i~~~  553 (1410)
                      -.|..+++..+.++.+.+....+.+.++.          -      .|-.+ .|+|++||..+|.+++++|++++.++..
T Consensus       448 ~~~~~e~~~~~e~~~~~~~i~lt~q~~~~----------~------~~~~~-v~~l~~~~~s~~~~~~~~t~~~~~~~~~  510 (1311)
T KOG1900|consen  448 HGPYTEQPASVEDVPPKEIILLTNQDIYT----------S------APLRY-VNVLASQYLSEPGKDAELTERSIYLYRY  510 (1311)
T ss_pred             cccccccccchhccCccceeeeecchhhh----------h------hhhhh-HHHHHHHHhcCCchhhhhccceeEEEee
Confidence            44555555555554344433333332222          1      13333 4999999999999999999999999999


Q ss_pred             cChHHHHHHHHhccCChhHHHHHHHHhChHHHHHHHHHHHcCcccCccccCHHHHHHHHHhc------------------
Q 000580          554 NRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSENLISNAVAEKAAEAF------------------  615 (1410)
Q Consensus       554 ~RPvDiL~~LL~~~~~~~~i~~Ff~~~G~~EacA~~L~LAc~~~~s~~~~s~~v~~~A~~af------------------  615 (1410)
                      |||.+++..++....      .|-..+|..|||++|++..|....+...    ....|..+|                  
T Consensus       511 R~~~~v~~~li~~~~------~~~~~v~~~~~l~~~~y~~~~~~~s~~~----~gsn~~~~l~~~~~~~~~~~~ks~~~~  580 (1311)
T KOG1900|consen  511 RRPIVVFLSLIKMPL------PFARYVDIWEALATALYGRELYEKSETL----EGSNAGMFLSEAAPGFSKVTLKSNREM  580 (1311)
T ss_pred             ccHhHHHHHHhcCCC------cccCchHHHHHHHHHhhcchhhhhhccc----ccchhhhHhhccCCCcCcCCcccchhc
Confidence            999999999999887      5778888889999999988876544331    011111111                  


Q ss_pred             ---cCCCCCCCcccccCccccccccCCCCCccccccccCcceeccchhHHHHHHHhhhhhccCCcceeeeccccCCCCeE
Q 000580          616 ---VDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVV  692 (1410)
Q Consensus       616 ---~~~~~~g~p~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~S~rh~Gl~Ly~sRLlrpiW~~~v~~~~~~~~~~~~~i  692 (1410)
                         ..+..+|+|+++.+.+..+.++..+|       ...+++|||||+|||+|++||+|+||+.+|++..   .++.+  
T Consensus       581 ~~~~~~~~vg~~~~~~s~~i~~~~~~~p~-------~~~~iv~S~~h~Gl~l~isRll~~vW~~~v~~~~---~s~~~--  648 (1311)
T KOG1900|consen  581 FKFLSNPSVGMPQFDGSQPISTLSNSCPG-------ELDPIVLSGKHDGLALLISRLLRNVWEESVVNET---MSEKS--  648 (1311)
T ss_pred             cccccCCCCCcCccccCCCccccCCCCCc-------cCCCeEEeccccchhHHHHHHHHHHHHhHHHHHH---hhcch--
Confidence               12223455554443222222211111       3456899999999999999999999999999862   12211  


Q ss_pred             EEecChhHHHHHHHHHHHHHHHHHHhhcccccccccccCCCCCCCccccCCCCCCCCCchhhhhhccccccccCCCCCcc
Q 000580          693 VCRLSSGAMQVLENKIRSLEKFLRCIRNQRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIRNLFGSYSRNADSNGAG  772 (1410)
Q Consensus       693 ~~~~s~~~l~~~~~~L~~L~~Fl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  772 (1410)
                             .++.+.+.++.|+.|++.    +....+++.+++++.+..++++++                +....+.+++.
T Consensus       649 -------~~~~l~s~~~sl~~~~~~----~~~y~gs~~~l~~~f~~~l~~~~s----------------f~~~~~~n~~~  701 (1311)
T KOG1900|consen  649 -------KCHLLESFNRSLRSKRNQ----FSYYLGSITGLNEFFNSHLDSTNS----------------FEGPTNGNAEK  701 (1311)
T ss_pred             -------hhhhHHHhhHHHHhhhhh----cceeeccccccchhhhhccccccc----------------ccccccchhHH
Confidence                   567777788888888855    455565666665555444443332                22222222211


Q ss_pred             cchhhh-------cCCCChHHHHH----------HHHHhhhcHHHHHhhcCHHHHHHhhhccccccccCchhhHHHHHHH
Q 000580          773 TSNKRQ-------RLPYSPAELAA----------IELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDRLATRLI  835 (1410)
Q Consensus       773 ~~~~~q-------~l~~~~~e~~~----------~eiL~e~~~~~I~~~l~~~~q~~L~~ltF~dLv~~~~g~~l~k~Li  835 (1410)
                      ++..+.       ..+.++++..+          +.+|++|+|.+|++.++++.|+.|.++||+|||++++ ++++++||
T Consensus       702 ~~~le~~a~~A~~~e~~si~~~~~fl~~~~Ea~l~~~l~~h~f~~Iv~els~~lqk~l~~ltF~dl~~~nd-kel~~~li  780 (1311)
T KOG1900|consen  702 AQQLESSAREALALELRSIKEILSFLLVLYEAFLWFLLSQHHFIDIVSELSADLQKELSCLTFHDLFTSND-KELTKELL  780 (1311)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhCHHHHHHHHhccHHHhcCcch-HHHHHHHH
Confidence            111100       01111112111          1168899999999999999999999999999999988 99999999


Q ss_pred             HHHHHhhcCCCCCCcHHHHHHHHHhcCCCCCCccchhHhhHHHHHHHhhcCCChHHHHHHHHHHHHHHhhCCCCCCHHHH
Q 000580          836 SALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTV  915 (1410)
Q Consensus       836 ~aLIn~~i~~~g~~svd~Is~~Lr~rCpsf~s~dDv~~~KA~E~L~~Ak~~~~~~er~~~L~eAL~Lf~kv~~~~~L~~v  915 (1410)
                      .++||+||.+.  ++||.||..||++||+||+++|+++|||.|+|++|+.+.+..++++++|++|+++.++.+.++|+.+
T Consensus       781 ~slin~~i~s~--a~vd~vs~~Lre~Cps~~s~~D~l~ykA~E~L~~~~~~~~~~~ke~~~r~~l~~~~~l~~~~~l~~~  858 (1311)
T KOG1900|consen  781 ISLINRYIMSG--ASVDYVSELLRERCPSFCSASDILTYKAVELLENAAAKLEATIKELMLRESLSVATKLFNQVDLRLE  858 (1311)
T ss_pred             HHHHHHHhccC--CChhHHHHHHHHhCcccccchHHHHHHHHHHHHhhhhchhhhHHHHHHHHHHHHHHHHhhhcchhhh
Confidence            99999999985  5999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHHHHHHHhcCCCCCccc------------CCcchhHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 000580          916 CRRFEDLRFYEAVVRLPLQKAQALDPAGDAFN------------DQIDAATREYALVQRQQCYEIITSALRSLKGDSSQR  983 (1410)
Q Consensus       916 c~~~~~l~fy~GvVeL~L~~A~~~Dp~~~al~------------~~~~~~~r~~~~~~R~~cY~~I~~~L~~l~~~~~~~  983 (1410)
                      |.+|++++||+|+|++.+.+|.+.||+..+..            |....++|..+|+.|..||.+||+++++++....  
T Consensus       859 ~~~lr~~~f~e~vv~~~~~~a~~~~~~~~~~~d~~~~e~~~~~~G~~~~~~R~~~y~~r~~~~~~if~~l~~~~~~~~--  936 (1311)
T KOG1900|consen  859 CADLRAERFYEGVVLLSLTKAVKSDPEGANDHDYKNQELAYDIIGISENDDRKVYYELRTLVYSLIFDTLDEADGSQS--  936 (1311)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhhcChhhchhhhccccchHHHhcCccccChHHHHHHHHHHHHHHHHHHHHhhccccc--
Confidence            99999999999999999999999999998863            3456788999999999999999999999886432  


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHcCCccccccccCCChHHHHhhcCCCchhhhh
Q 000580          984 EFGSPVRPAGPRSALDPASRKKYICQIVQLGVQSPDRIFHEYLYRTMIDLGLENELLEYGGPDLVPFLQSAGREPIQEVR 1063 (1410)
Q Consensus       984 ~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~al~S~DelFH~~LYdWLi~~~~~d~LLei~sPfLe~yL~~~~~~~~~~~~ 1063 (1410)
                      .+++|..++    +.... .-.++.++|...++++||+||++||+||+.+++.|+||++.|||+.|||+|++..+     
T Consensus       937 ~~q~~~~~n----s~~~~-a~~~~~~~~~~~~k~~d~lfh~~lydwL~~~~~~e~ll~i~sp~~~P~L~r~a~~d----- 1006 (1311)
T KOG1900|consen  937 ISQSPMKGN----SDSNF-AVGLILKSYMAILKSKDRLFHYALYDWLVAISLLEELLDIESPFILPYLKRMALSD----- 1006 (1311)
T ss_pred             ccCCCCccc----ccchh-hhhhHHHHHHHHhhhcccccchhhHHHHHHhhHHHHHhcccCccccHHHHHhhhcc-----
Confidence            122222221    23333 55778889999999999999999999999999999999999999999999998754     


Q ss_pred             hcccccccccccCCCCCCCCCchhhHHHHHHHHHHhhhcHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 000580         1064 AVSGITSAASLMGQTGTPIPSNEAKYFDLLARYYVLKRQHLLAAHVLLRLAERRSTDEKDAPTLDQRRQYLSNAILQAKN 1143 (1410)
Q Consensus      1064 ~~~~~~~~~~~~~~~g~~~~~~~~~~~DLLWryy~k~~~~~~AA~VL~~LA~~~s~~s~~~i~L~~RIeYLsrAv~~aks 1143 (1410)
                                             ++++||||+||+|+++|.+||+||++||.     +.|+|+|+||||||+||+++|||
T Consensus      1007 -----------------------lk~~dLLw~YY~K~e~~~~AA~VL~rLAt-----~~~~itLeqRiEyLsRA~~~~~s 1058 (1311)
T KOG1900|consen 1007 -----------------------LKIFDLLWKYYEKREQFSQAAHVLYRLAT-----SSFDITLEQRIEYLSRAVGFAKS 1058 (1311)
T ss_pred             -----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cCCCccHHHHHHHHHHHhhhccc
Confidence                                   78999999999999999999999999995     55789999999999999999999


Q ss_pred             cCCCCCccCCccccccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCCCCCCCccchhhHHHHHHH
Q 000580         1144 ATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELEAIASSLETSVDMSESTQNGSAPDSSSTTDANYAKIVREK 1223 (1410)
Q Consensus      1144 ~~~~~~~~g~~~~~~~~~fl~~le~kleVaqiQ~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 1223 (1410)
                      +++     +++. +.+++|+.++|||+|||.||.+|+.++.+.+..                           +.+++++
T Consensus      1059 ~s~-----~s~~-~a~~qf~~~i~dklevA~iQ~dvl~a~~d~~~~---------------------------~~~~~el 1105 (1311)
T KOG1900|consen 1059 SSP-----SSSK-VAVGQFLIEIEDKLEVASIQDDVLVAMQDDRID---------------------------ASAANEL 1105 (1311)
T ss_pred             CCC-----chhH-HHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhcc---------------------------hhHHHHH
Confidence            986     3333 347999999999999999999999887754322                           1247799


Q ss_pred             HHHhcccCCCHHHHHHHhhccCCchhHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHhcCCHHH-H----HHHHHHhcc
Q 000580         1224 AKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGGIAE-A----CSVLKRVGS 1298 (1410)
Q Consensus      1224 i~~L~~~Ll~it~Lyn~yA~P~~l~E~~L~Il~~s~~~~~~d~~~I~~~W~~ii~~~~~~~~~~e-~----~~~v~~lg~ 1298 (1410)
                      +++||++|+|+|+|||||||||+||||||.|||||+|   +|+.+|+++|++||+++++++++.. .    .++|..++ 
T Consensus      1106 ~k~Ld~el~~~t~Lyn~fAdPf~l~Ei~L~I~~~a~y---~D~~~I~~~W~~li~s~~~~~~~~~~~~~~~~~~I~~~~- 1181 (1311)
T KOG1900|consen 1106 VKELDGELLSLTQLYNEFADPFDLWEICLSIFKCADY---SDPSLIQETWARLIDSALSQPGITSEVLKRLGSKISNTL- 1181 (1311)
T ss_pred             HHHhccccccHHHHHHhccCcchHHHHHHHHhhhccC---CChHHHHHHHHHHHHHHHhcCCCcHHHHhhHHHHHhhhh-
Confidence            9999999999999999999999999999999999999   6999999999999999999885433 2    35666666 


Q ss_pred             cccCCCCccccHHHHHHHHHHHHHhhcccccccCCchhHHHHHHHhcCCCchhHHhhhcCCCCCCCCCCCcchhhhcccC
Q 000580         1299 HMYPGDGAVLPLDTLCLHLEKAALERLDSQVESVGDEDIARALLAACKGAAEPVLNTYDQXXXXXXXXYPVELFCRHQTS 1378 (1410)
Q Consensus      1299 ~~y~~~~~~FPl~~lv~~LE~~~~~~~~~~~~~~~~~~v~~~ll~a~~~~~e~~l~~Y~~L~~~~~~~~~~~~~~~~~~~ 1378 (1410)
                      +.|...++.||..|.|..||..+|++      .++.   +..+.++ |++.+.+|++|++++++..+.|.+..=.+|   
T Consensus      1182 ~~~~~~~~~~~~~F~i~~l~~~~~~~------~~d~---~~~~~a~-g~~~~~~L~ay~~~~~~~~vl~~~~~~~~~--- 1248 (1311)
T KOG1900|consen 1182 KVYGKTDVDSEFVFPIAELESKVCEL------FFDE---PKELAAC-GSVIEPFLEAYVSLLKMYYVLWSLIERSEH--- 1248 (1311)
T ss_pred             hhhcCCcccCchhhhHHHHHHHHHHH------hccc---HHHHhhh-cccHHHHHHHHHHHHHHHHHhhhhhcchhh---
Confidence            44555559999999999999999997      3332   4445555 788999999999999999999998865566   


Q ss_pred             ccccccccccccccccchhhHHHHHHHH
Q 000580         1379 GYAFFDQCSWYLESGQCLYLQKEWVQAL 1406 (1410)
Q Consensus      1379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1406 (1410)
                              ...+-..||.||+|+||+..
T Consensus      1249 --------~~~~~~ke~~~lv~~~~~~~ 1268 (1311)
T KOG1900|consen 1249 --------LVLVVIKEVTWLVKNWYQVS 1268 (1311)
T ss_pred             --------hHHHHHHHHHHHHhchhhhc
Confidence                    45555689999999999864

>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion] Back     alignment and domain information
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins Back     alignment and domain information
>PF03177 Nucleoporin_C: Non-repetitive/WGA-negative nucleoporin C-terminal; InterPro: IPR007187 This is the C-terminal half of a family of nucleoporin proteins Back     alignment and domain information
>KOG4121 consensus Nuclear pore complex, Nup133 component (sc Nup133) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG4521 consensus Nuclear pore complex, Nup160 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto Back     alignment and domain information
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto Back     alignment and domain information
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates Back     alignment and domain information
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] Back     alignment and domain information
>KOG0646 consensus WD40 repeat protein [General function prediction only] Back     alignment and domain information
>PLN00181 protein SPA1-RELATED; Provisional Back     alignment and domain information
>KOG0289 consensus mRNA splicing factor [General function prediction only] Back     alignment and domain information
>KOG0646 consensus WD40 repeat protein [General function prediction only] Back     alignment and domain information
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] Back     alignment and domain information
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] Back     alignment and domain information
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] Back     alignment and domain information
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only] Back     alignment and domain information
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] Back     alignment and domain information
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1410
3i5p_A525 Nucleoporin NUP170; helical stack, membrane, mRNA 3e-94
3i5q_B252 Nucleoporin NUP170; helical stack, membrane, mRNA 5e-23
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-09
3i4r_B644 Nuclear pore complex protein NUP133; protein trans 1e-04
>3i5p_A Nucleoporin NUP170; helical stack, membrane, mRNA transport, nuclear pore complex, nucleus, phosphoprotein, protein transport; 3.20A {Saccharomyces cerevisiae} Length = 525 Back     alignment and structure
 Score =  313 bits (802), Expect = 3e-94
 Identities = 88/577 (15%), Positives = 180/577 (31%), Gaps = 117/577 (20%)

Query: 849  GTVDDISGRLREGCPSYFKESDYKFFLAVECLERA--AVTSDSEEKENLAREAFNFLSKV 906
             +++  +  L+E C S+   SD   F A+E L RA      + +      + A   L ++
Sbjct: 2    PSIEYTATALQERCGSFCSASDILGFRAIEHLRRAKEIGLRNYDSLNYHLKNATALLEQI 61

Query: 907  PES---ADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDAF----NDQIDAATREYAL 959
             +      L+        + +Y   +   L  A ++D    A     N  ++   R+   
Sbjct: 62   VDDLSIEKLKEAVSMMLSVNYYPKSIEFLLNIANSMDKGKLACQYVANGFLENDDRKQYY 121

Query: 960  VQRQQCYEIITSALRSLKGDSSQREFGSPVRPAGPRSALDPASRKKYICQIVQLGVQSPD 1019
             +R   Y+++   L  +   + +            + ++      K   +  +  ++  D
Sbjct: 122  DKRILVYDLVFDTLIKVDELAEK----KQSSKTQNQISISNDDEVKLRQKSYEAALKYND 177

Query: 1020 RIFHEYLYRTMIDLGLENELLEYGGPDLVPFLQSAGREPIQEVRAVSGITSAASLMGQTG 1079
            R+FH ++Y  ++    E +LL+   P ++P+L                            
Sbjct: 178  RLFHYHMYDWLVSQNREEKLLDIETPFILPYLMEK------------------------- 212

Query: 1080 TPIPSNEAKYFDLLARYYVLKRQHLLAAHVLLRLAERRSTDEKDAPTLDQRRQYLSNAIL 1139
                 +  K  ++L  YY  + +   +A +L RLA           TL +R ++LS A  
Sbjct: 213  ---AGSSLKISNILWVYYSRRSKFFESAEILYRLATSNF-----DITLFERIEFLSRANG 264

Query: 1140 QAKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELEAIASSLETSVDMSES 1199
               + +                L   ++    V   Q  I   +   A       D    
Sbjct: 265  FCNSVSPLSQ------KQRIVQLASRIQDACEVAGIQGDILSLVYTDARIDSAIKD---- 314

Query: 1200 TQNGSAPDSSSTTDANYAKIVREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFAN 1259
                                  E  K L   + S ++L+N++AVP    EI L +   A+
Sbjct: 315  ----------------------ELIKTLDGKILSTSELFNDFAVPLSYHEIALFIFKIAD 352

Query: 1260 YTGDADSSIIRETWARLIDQALSKGG-----------IAEACSVLKRVGSHMYPGDGAVL 1308
            +    D  +I   W  L      +             I    +VL ++G ++   +  + 
Sbjct: 353  FR---DHEVIMAKWDELFQSLRMEFNNTGKKEDSMNFINLLSNVLIKIGKNVQDSE-FIF 408

Query: 1309 PLDTLCLHLEKAALERLDSQVESVGDEDIARALLAACKGAAEPVLNTYDQXXXXXXXXYP 1368
            P+  L   +     E      E +    I    +     +   +     +          
Sbjct: 409  PIFELFPIVCNFFYET--LPKEHIVSGSIVSIFI-TAGVSFNKMYYILKE---------- 455

Query: 1369 VELFCRHQTSGYAFFDQCSWYLESGQCLYLQKEWVQA 1405
                     S           + + +  +L  EW ++
Sbjct: 456  ---LIETSDS--------DNSVFNKEMTWLIHEWYKS 481
>3i5q_B Nucleoporin NUP170; helical stack, membrane, mRNA transport, nuclear pore complex, nucleus, phosphoprotein, protein transport; 2.20A {Saccharomyces cerevisiae} Length = 252 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3i4r_B Nuclear pore complex protein NUP133; protein transport, structural protein, kinetochore, mRNA transport, nucleus, phosphoprotein, translocation; 3.53A {Homo sapiens} Length = 644 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1410
d1tbga_340 beta1-subunit of the signal-transducing G protein 94.65
d1xksa_403 Nuclear pore complex protein Nup133 {Human (Homo s 93.94
d1gxra_337 Groucho/tle1, C-terminal domain {Human (Homo sapie 93.87
d1vyhc1317 Platelet-activating factor acetylhydrolase IB subu 92.67
d1nr0a1311 Actin interacting protein 1 {Nematode (Caenorhabdi 90.48
d1k8kc_371 Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur 86.45
d1nr0a2299 Actin interacting protein 1 {Nematode (Caenorhabdi 81.1
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.65  E-value=0.11  Score=26.39  Aligned_cols=48  Identities=15%  Similarity=0.025  Sum_probs=28.1

Q ss_pred             CCCCCCCCCCC-EEEEEEECEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf             44334631346-26899809199996389999886335988626799951
Q 000580           82 NALCGIFPEIR-RAWASVDNSLFLWRFDKWDGQCPEYTGEEQVICAVGLA  130 (1410)
Q Consensus        82 ~~~mGlFpEI~-rAW~tIDn~L~LW~Y~~~~~~~~~fd~~~~~I~aV~Lv  130 (1410)
                      .+.+-.-|.=+ -|=..-|..+.+||...+... ..+.+-...|.+|..-
T Consensus        58 I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~-~~~~~~~~~v~~v~~~  106 (340)
T d1tbga_          58 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV-HAIPLRSSWVMTCAYA  106 (340)
T ss_dssp             EEEEEECTTSSEEEEEETTTEEEEEETTTTEEE-EEEECSCSCEEEEEEC
T ss_pred             EEEEEECCCCCEEEEEECCCCEEEEECCCCEEE-EEEECCCCCEEEEEEE
T ss_conf             889999899999999978995556310210257-9972465337756760
>d1xksa_ b.69.14.1 (A:) Nuclear pore complex protein Nup133 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure