Citrus Sinensis ID: 000665

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360---

MAPNNENLRDLQWLFQAIESESLNLHNLSFFLSQPATGCHQETENSMNINIGKDTLLYFPHLLTLLVTAEKAHTSLKHLEFHSVEWEIEQMRILGLLLDCSSNVKQVVFRRNKFDAECLAEISDVVRRNGVIKEVMFTESGIKNAGASLLASALKVNDTLEELQIWEDSIGSKGAEELSKMIEANSTLKSLTIFDSSSLTATPLISAVLARNRAMEVHVWSGENGEKSSKVVEFLPENGTLRIYRLDVSGSCRVACSLGCNTTVKSLDMTGVRLKSRWAKEFRWVLQQNQSLKEVILSKTCLKDKGVVYVAAGLFKNRSLESLYLHGNWFSGVGVEHLLCPLSRFSSLQSQANITLRSVTFGGGRTKIGRDGIAAILQMLTTNETVTQLGIYDDQSLRPDDFVRIFKSLQKNASLRQLSLQGCKGVRGELVQQAIMETLQVNPWIEDIDLERTPLKNSGKADGIYQRLGQKGRSEPDIDLLKDMPLTEPKSCRVFFCGQEYAGKTTLCNSISQNFSSSKLPYIEQVRTLVNPVEQAVRPVGMKIKTLKDEDTRISIWNLAGQHEFYSLHDLMFPGHGSASCFLIISSLFRKPTNREPKTPEEIEEDLRYWLRFIVSNSRRAVQQCMLPNVTVVLTHYDKINQPSQDMQLTVSSIQRLKDKFQGFVDFYPTVFTIDARSSASVTKLTHHIRKTSRTILQRVPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFAELCQVKVPPLRIRSRHDNKDKVEMRRRAIATCLHHIGEVIYFDELGFLILDCEWFCSEVLSKLIKLEVRKQSSLENNGFTSRKELEKILRGSLQSQIPGMGSKVFENLEASDLVRMMLKLELCYEQDPSDPDSLLLIPSILEEGRGKPQKWQIDSPDCIYAGRHLECDDSSHMFLTPGFFPQFDCLQIQVHLHNRIMALKNQHGATYNLEKYLISIIINGIYIRVELGGQLGYYIDVLACSTKNLTETLRLIHQLIIPAIQSLCQGVTLTENILRPECVRNLTPPRYRKTQFVHVQLLKQALLSLPADSMYDYQHTWDLVSDSGKPILRAAFDLARDLLSDDDFREVLHRRYHDLHNLAVELQVPTENNPEEPDPSNEPDGKVEPTFGGIAKEIQGLRYYEHRLLIELHRKVNYMANFNVQLEERKVPNMIYFVRTENYSRKLITNIISGMTALRLHMLCEFRREMHVVEDQMGCEIMQVDNRTVKSLAPYMTKFMKLLTFALKIGAHLATGMGQLIPDLSKEVAHLADSSLVYGAAGAVAAGAVGAVAMGRVEGSRNRSRSRAGDIQQELIAVQQWVVDFLRERRCSTGKDIAEKFGLWRVRYRDDGHIAWICRRHMIVRAHEVIEVPI

ccccccccHHHHHHHHHHHcccccccEEEcccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccEEEcccccccHHHHHHHHHHHHccccccEEEcccccccHHHHHHHHHHHHHcccccEEEcccccccHHHHHHHHHHHHccccccEEEcccccccHHHHHHHHHHHHHcccccEEEccccccccHHHHHHHHHHHcccEEEEccccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHccccccEEEcccccccHHHHHHHHHHHHccccccEEEcccccccHHHHHHHHHHHHccccccEEEcccccccHHHHHHHHHHHHccccccccccccEEEEEEEcccccccHHHHHHHHHHHHHcccccEEEccccccccHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHHHHHHccccccccccccccccccccccHHHccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccEEEEEEccccccEEEEcccccccccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccccccccHHHHHHHHHHHHHHHHccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHccEEEEccccEEEEcccHHHHHHHHHcccccccccccccccccccHHHHHHHHHcccccccccccccccccccHHHHHHHHHHccccccccccccccEEEEcccccccccccccccccccccccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEccEEEEEEEEcccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHcccccccEEEEccHHHHHcccccccccccHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccEEEccccccHHHHHHHHccccccccccccccccEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHcccEEEEEcccccEEEEEcHHHHHcccccEEccc

cccccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHcccHHHHcccccHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHccccHHccccHHHHHHHHHHHHHcccccEEEcccccccHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHHccHHHHHHHHHccEEEEEcccccccHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHcccccEEEccccccccHHHHHHHHHHHHHccccHHHHHHHHccccccccccEEEEEcccccccHHHHHHHHHcccccccccHHHccccccccccEEcccccEEEEEEcccEEEEEEEcccHHHHHHHHHHccccccccEEEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHEccccEEEEEccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHHHHHHcccEEEEccccEEEEcHHHHHHHHHHHHHcccccccccEccccEEEHHHHHHHHHHHHHHccccccccHcccccHHHHHHHHHHHHHHHcccccccccEEEEEcHcHcccccccccEccccccEEcccEEEEcccccEEcccccccHHHHHHHHEEHHHHHHHcccccccEEcccHHEEEEEEccEEEEEEEccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHcccHcHcccccccHHHHHHHHHcccccccccccccccccccccccEccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEcccEHEccccccEEEEEEcccccHHHHHccccHHHHHHHHHHHHHHHccEEEEccccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccEEEEEcccccEEEEEHHHHHHcHccEEEccc

mapnnenlRDLQWLFQAIESEslnlhnlsfflsqpatgchqetensmninigkdtllyFPHLLTLLVTAEKAHTSlkhlefhsVEWEIEQMRILGLLLDCSSNVKQVVFRRNKFDAECLAEISDVVRRNGVIKEVMFTESGIKNAGASLLASALKVNDTLEELQIWEDSIGSKGAEELSKMIEANStlksltifdsssltatPLISAVLARNRAMEVHVwsgengeksSKVVEFlpengtlriyrldvsgscrvacslgcnttvksldmtgvrlKSRWAKEFRWVLQQNQSLKEVILSKTCLKDKGVVYVAAGLfknrsleslylhgnwfsgvgvehllcplsrfsslqsqANITLrsvtfgggrtkiGRDGIAAILQMLTTNetvtqlgiyddqslrpDDFVRIFKSLQKNASLRQLSLQGCKGVRGELVQQAIMETLqvnpwiedidlertplknsgkadgiyqrlgqkgrsepdidllkdmpltepkscrvffcgqeyagkttlcnsisqnfsssklpyiEQVRTLVNPveqavrpvgmkiktlkdedtRISIWNLagqhefyslhdlmfpghgsaSCFLIISSlfrkptnrepktpeEIEEDLRYWLRFIVSNSRRAVQQCMLPNVTVVLTHYdkinqpsqdmqLTVSSIQRLKDKFQGFVDFYPTVFTIDARSSASVTKLTHHIRKTSRTILQRVPRVYQLCNDLIQILSDwrsenynkpaMKWKEFAELcqvkvpplrirsrhdnkDKVEMRRRAIATCLHHIGEVIYFDELGFLILDCEWFCSEVLSKLIKLEVrkqsslenngftsRKELEKILRGSlqsqipgmgskvfeNLEASDLVRMMLKLELcyeqdpsdpdslllipsileegrgkpqkwqidspdciyagrhlecddsshmfltpgffpqfdcLQIQVHLHNRIMALKNQHGATYNLEKYLISIIINGIYIRVELGGQLGYYIDVLACSTKNLTETLRLIHQLIIPAIQSLcqgvtltenilrpecvrnltppryrktQFVHVQLLKQALLslpadsmydyqhtWDLVSDSGKPILRAAFDLARDLLSDDDFREVLHRRYHDLHNLAVelqvptennpeepdpsnepdgkveptfggIAKEIQGLRYYEHRLLIELHRKVNYMANFNvqleerkvpnmiyFVRTENYSRKLITNIISGMTALRLHMLCEFRREMHVVEdqmgceimqvdnrtvkSLAPYMTKFMKLLTFALKIGAHLATGMGQLIPDLSKEVAHLADSSLVYGAAGAVAAGAVGAVAMGRvegsrnrsrsraGDIQQELIAVQQWVVDFLRERRCSTGKDIAEKFGLWRVRYRDDGHIAWICRRHMIVRAHEVIEVPI

MAPNNENLRDLQWLFQAIESESLNLHNLSFFLSQPATGCHQETENSMNINIGKDTLLYFPHLLTLLVTAEKAHTSLKHLEFHSVEWEIEQMRILGLLLDCSSNVKQVVFRRNKFdaeclaeisdvvrrngvIKEVMFTESGIKNAGASLLASALKVNDTLEELQIWEDSIGSKGAEELSKMIEANSTLKSltifdsssltATPLISAVLARNRAMEVHVwsgengeksskVVEFLPENGTLRIYRLDVSGSCRVACSlgcnttvksldmtgvRLKSRWAKEFRWVLQQNQSLKEVILSKTCLKDKGVVYVAAGLFKNRSLESLYLHGNWFSGVGVEHLLCPLSRFSSLQSQANITlrsvtfgggrtKIGRDGIAAILQMLTTNETVTQLGIYDDQSLRPDDFVRIFKSLQKNASLRQLSLQGCKGVRGELVQQAIMETLQVNPWIEDIDLertplknsgkadgiyqrlgqkgrsepdiDLLKDMPLTEPKSCRVFFCGQEYAGKTTLCNSISQNFSSSKLPYIEQVRTLvnpveqavrpvgmkiktlkdedTRISIWNLAGQHEFYSLHDLMFPGHGSASCFLIISSLfrkptnrepktpeeieeDLRYWLRFIVSNSRRAVQQCMLPNVTVVLTHYDKINQPSQDMQLTVSSIQRLKDKFQGFVDFYPTVFTIDarssasvtklthhirktsrtilqrvprVYQLCNDLIQILSDWRSENYNKPAMKWKEFAElcqvkvpplrirsrhdnkdkvEMRRRAIATCLHHIGEVIYFDELGFLILDCEWFCSEVLSKLIKlevrkqsslenngftsrkELEKILRGSlqsqipgmgsKVFENLEASDLVRMMLKLELCYEQDPSDPDSLLLIPSILEegrgkpqkwqiDSPDCIYAGRHLECDDSSHMFLTPGFFPQFDCLQIQVHLHNRIMALKNQHGATYNLEKYLISIIINGIYIRVELGGQLGYYIDVLACSTKNLTETLRLIHQLIIPAIQSLCQGVTLTENILRPECVRNLTPPRYRKTQFVHVQLLKQALLSLPADSMYDYQHTWDLVSDSGKPILRAAFDLARDLLSDDDFREVLHRRYHDLHNLAVELQVPTENNPEEPDPSNEPDGKVEPTFGGIAKEIQGLRYYEHRLLIELHRKVNYMANFnvqleerkvpnMIYFvrtenysrkLITNIISGMTALRLHMLCEFRREMHVVEDQMGCEIMQVDNRTVKSLAPYMTKFMKLLTFALKIGAHLATGMGQLIPDLSKEVAHLADSSLVYGAAGAVAAGAVGAVAMGRVEGsrnrsrsragdiqqELIAVQQWVVDFLRERRcstgkdiaekfglwrvryrdDGHIAWICRRHMIVRAhevievpi

MAPNNENLRDLQWLFQAIeseslnlhnlsfflsQPATGCHQETENSMNINIGKDtllyfphlltllvtAEKAHTSLKHLEFHSVEWEIEQMRILGLLLDCSSNVKQVVFRRNKFDAECLAEISDVVRRNGVIKEVMFTESGIKNAGASLLASALKVNDTLEELQIWEDSIGSKGAEELSKMIEANSTLKSLTIFDSSSLTATPLISAVLARNRAMEVHVWSGENGEKSSKVVEFLPENGTLRIYRLDVSGSCRVACSLGCNTTVKSLDMTGVRLKSRWAKEFRWVLQQNQSLKEVILSKTCLKDKGVVYVAAGLFKNRSLESLYLHGNWFSGVGVEHLLCPLSRFSSLQSQANITLRSVTFGGGRTKIGRDGIAAILQMLTTNETVTQLGIYDDQSLRPDDFVRIFKSLQKNASLRQLSLQGCKGVRGELVQQAIMETLQVNPWIEDIDLERTPLKNSGKADGIYQRLGQKGRSEPDIDLLKDMPLTEPKSCRVFFCGQEYAGKTTLCNSISQNFSSSKLPYIEQVRTLVNPVEQAVRPVGMKIKTLKDEDTRISIWNLAGQHEFYSLHDLMFPGHGSASCFLIISSLFRKPTNREPKTPEEIEEDLRYWLRFIVSNSRRAVQQCMLPNVTVVLTHYDKINQPSQDMQLTVSSIQRLKDKFQGFVDFYPTVFTIDARSSASVTKLTHHIRKTSRTILQRVPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFAELCQVKVPPLRIRSRHDNKDKVEMRRRAIATCLHHIGEVIYFDELGFLILDCEWFCSEVLSKLIKLEVRKQSSLENNGFTSRKELEKILRGSLQSQIPGMGSKVFENLEASDLVRMMLKLELCYEQDPSDPDSLLLIPSILEEGRGKPQKWQIDSPDCIYAGRHLECDDSSHMFLTPGFFPQFDCLQIQVHLHNRIMALKNQHGATYNLEKYLisiiingiyiRVELGGQLGYYIDVLACSTKNLTETLRLIHQLIIPAIQSLCQGVTLTENILRPECVRNLTPPRYRKTQFVHVQLLKQALLSLPADSMYDYQHTWDLVSDSGKPIlraafdlardllsdddfrEVLHRRYHDLHNLAVELQVPTennpeepdpsnepdGKVEPTFGGIAKEIQGLRYYEHRLLIELHRKVNYMANFNVQLEERKVPNMIYFVRTENYSRKLITNIISGMTALRLHMLCEFRREMHVVEDQMGCEIMQVDNRTVKSLAPYMTKFMKLLTFALKIGAHLATGMGQLIPDLSKEVAHLADSSLVYgaagavaagavgavaMGRVEGSRNRSRSRAGDIQQELIAVQQWVVDFLRERRCSTGKDIAEKFGLWRVRYRDDGHIAWICRRHMIVRAHEVIEVPI

*********DLQWLFQAIESESLNLHNLSFFLSQPATGCHQETENSMNINIGKDTLLYFPHLLTLLVTAEKAHTSLKHLEFHSVEWEIEQMRILGLLLDCSSNVKQVVFRRNKFDAECLAEISDVVRRNGVIKEVMFTESGIKNAGASLLASALKVNDTLEELQIWEDSI****************TLKSLTIFDSSSLTATPLISAVLARNRAMEVHVWSGEN****SKVVEFLPENGTLRIYRLDVSGSCRVACSLGCNTTVKSLDMTGVRLKSRWAKEFRWVLQQNQSLKEVILSKTCLKDKGVVYVAAGLFKNRSLESLYLHGNWFSGVGVEHLLCPLSRFSSLQSQANITLRSVTFGGGRTKIGRDGIAAILQMLTTNETVTQLGIYDDQSLRPDDFVRIFKSLQKNASLRQLSLQGCKGVRGELVQQAIMETLQVNPWIEDIDLER*********************************LTEPKSCRVFFCGQEYAGKTTLCNSISQNFSSSKLPYIEQVRTLVNPVEQAVRPVGMKIKTLKDEDTRISIWNLAGQHEFYSLHDLMFPGHGSASCFLIISSLFR**************EDLRYWLRFIVSNSRRAVQQCMLPNVTVVLTHYDKINQPSQDMQLTVSSIQRLKDKFQGFVDFYPTVFTIDARSSASVTKLTHHIRKTSRTILQRVPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFAELCQVKVPPLRIR********VEMRRRAIATCLHHIGEVIYFDELGFLILDCEWFCSEVLSKLIKLEV**********************************KVFENLEASDLVRMMLKLELCYEQ*******LLLIPSILEEG***PQKWQIDSPDCIYAGRHLECDDSSHMFLTPGFFPQFDCLQIQVHLHNRIMALKNQHGATYNLEKYLISIIINGIYIRVELGGQLGYYIDVLACSTKNLTETLRLIHQLIIPAIQSLCQGVTLTENILRPECVRNLTPPRYRKTQFVHVQLLKQALLSLPADSMYDYQHTWDLVSDSGKPILRAAFDLARDLLSDDDFREVLHRRYHDLHNLAVEL***********************TFGGIAKEIQGLRYYEHRLLIELHRKVNYMANFNVQLEERKVPNMIYFVRTENYSRKLITNIISGMTALRLHMLCEFRREMHVVEDQMGCEIMQVDNRTVKSLAPYMTKFMKLLTFALKIGAHLATGMGQLIPDLSKEVAHLADSSLVYGAAGAVAAGAVGAVAMGR**************IQQELIAVQQWVVDFLRERRCSTGKDIAEKFGLWRVRYRDDGHIAWICRRHMIVRAHEVIE***

******NLRDLQWLFQAIESESLNLHNLSFFLSQPATGCHQETENSMNINIGKDTLLYFPHLLTLLVTAEKAHTSLKHLEFHSVEWEIEQMRILGLLLDCSSNVKQVVFRRNKFDAECLAEISDVVRRNGVIKEVMFTESGIKNAGASLLASALKVNDTLEELQIWEDSIGSKGAEELSKMIEANSTLKSLTIFDSSSLTATPLISAVLARNRAMEVHVWSGENGEKSSKVVEFLPENGTLRIYRLDVSGSCRVACSLGCNTTVKSLDMTGVRLKSRWAKEFRWVLQQNQSLKEVILSKTCLKDKGVVYVAAGLFKNRSLESLYLHGNWFSGVGVEHLLCPLSRFSSLQSQANITLRSVTFGGGRTKIGRDGIAAILQMLTTNETVTQLGIYDDQSLRPDDFVRIFKSLQKNASLRQLSLQGCKGVRGELVQQAIMETLQVNPWIEDIDLERTPLKNSGKADGIYQRLGQKGRSEPDIDLLKDMPLTEPKSCRVFFCGQEYAGKTTLCNSISQNFSSSKLPYIEQVRTLVNPVEQAVRPVGMKIKTLKDEDTRISIWNLAGQHEFYSLHDLMFPGHGSASCFLIISSLFRKPT****KTPEEIEEDLRYWLRFIVSNSR*****CMLPNVTVVLTHYDKINQ*********SSIQRLKDKFQGFVDFYPTVFTIDARSSASVTKLTHHIRKTSRTILQRVPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFAELCQVKVPPLRIRSRHDNKDKVEMRRRAIATCLHHIGEVIYFDELGFLILDCEWFCSEVLSKLIKLEVRKQSSLENNGFTSRKELEKILRGSLQSQIPGMGSKVFENLEASDLVRMMLKLELCYEQDPSDPDSLLLIPSILEEGRG*****QIDSPDCIYAGRHLECDDSSHMFLTPGFFPQFDCLQIQVHLHNRIMALKNQHGATYNLEKYLISIIINGIYIRVELGGQLGYYIDVLACSTKNLTETLRLIHQLIIPAIQSLCQGVTLTENILRPECVRNLTPPRYRKTQFVHVQLL**********SMYDYQHTWDLVSDSGKPILRA***L**DLLSDDDFREVLHRRYHDLHNLAVELQVPT***************KVEPTFGGIAKEIQGLRYYEHRLLIELHRKVNYMANFNVQLEERKVPNMIYFVRTENYSRKLITNIISGMTALRLHMLCEFRREMHVVEDQMGCEIMQVDNRTVKSLAPYMTKFMKLLTFALKIGAHLATGMGQLIPDLSKEVAHLADSSLVYGAAGAVAAGAVG****************************QQWVVDFLRERRCSTGKDIAEKFGLWRVRYRDDGHIAWICRRHMIVRAHEVIEVPI

MAPNNENLRDLQWLFQAIESESLNLHNLSFFLSQPATGCHQETENSMNINIGKDTLLYFPHLLTLLVTAEKAHTSLKHLEFHSVEWEIEQMRILGLLLDCSSNVKQVVFRRNKFDAECLAEISDVVRRNGVIKEVMFTESGIKNAGASLLASALKVNDTLEELQIWEDSIGSKGAEELSKMIEANSTLKSLTIFDSSSLTATPLISAVLARNRAMEVHVWSGENGEKSSKVVEFLPENGTLRIYRLDVSGSCRVACSLGCNTTVKSLDMTGVRLKSRWAKEFRWVLQQNQSLKEVILSKTCLKDKGVVYVAAGLFKNRSLESLYLHGNWFSGVGVEHLLCPLSRFSSLQSQANITLRSVTFGGGRTKIGRDGIAAILQMLTTNETVTQLGIYDDQSLRPDDFVRIFKSLQKNASLRQLSLQGCKGVRGELVQQAIMETLQVNPWIEDIDLERTPLKNSGKADGIYQRLGQKGRSEPDIDLLKDMPLTEPKSCRVFFCGQEYAGKTTLCNSISQNFSSSKLPYIEQVRTLVNPVEQAVRPVGMKIKTLKDEDTRISIWNLAGQHEFYSLHDLMFPGHGSASCFLIISSLFRKPTNREPKTPEEIEEDLRYWLRFIVSNSRRAVQQCMLPNVTVVLTHYDKINQPSQDMQLTVSSIQRLKDKFQGFVDFYPTVFTIDARSSASVTKLTHHIRKTSRTILQRVPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFAELCQVKVPPLRIRSRHDNKDKVEMRRRAIATCLHHIGEVIYFDELGFLILDCEWFCSEVLSKLIKLEVRKQSSLENNGFTSRKELEKILRGSLQSQIPGMGSKVFENLEASDLVRMMLKLELCYEQDPSDPDSLLLIPSILEEGRGKPQKWQIDSPDCIYAGRHLECDDSSHMFLTPGFFPQFDCLQIQVHLHNRIMALKNQHGATYNLEKYLISIIINGIYIRVELGGQLGYYIDVLACSTKNLTETLRLIHQLIIPAIQSLCQGVTLTENILRPECVRNLTPPRYRKTQFVHVQLLKQALLSLPADSMYDYQHTWDLVSDSGKPILRAAFDLARDLLSDDDFREVLHRRYHDLHNLAVELQVP***************GKVEPTFGGIAKEIQGLRYYEHRLLIELHRKVNYMANFNVQLEERKVPNMIYFVRTENYSRKLITNIISGMTALRLHMLCEFRREMHVVEDQMGCEIMQVDNRTVKSLAPYMTKFMKLLTFALKIGAHLATGMGQLIPDLSKEVAHLADSSLVYGAAGAVAAGAVGAVAMGRV************DIQQELIAVQQWVVDFLRERRCSTGKDIAEKFGLWRVRYRDDGHIAWICRRHMIVRAHEVIEVPI

****NENLRDLQWLFQAIESESLNLHNLSFFLSQPATGCHQETENSMNINIGKDTLLYFPHLLTLLVTAEKAHTSLKHLEFHSVEWEIEQMRILGLLLDCSSNVKQVVFRRNKFDAECLAEISDVVRRNGVIKEVMFTESGIKNAGASLLASALKVNDTLEELQIWEDSIGSKGAEELSKMIEANSTLKSLTIFDSSSLTATPLISAVLARNRAMEVHVWSGENGEKSSKVVEFLPENGTLRIYRLDVSGSCRVACSLGCNTTVKSLDMTGVRLKSRWAKEFRWVLQQNQSLKEVILSKTCLKDKGVVYVAAGLFKNRSLESLYLHGNWFSGVGVEHLLCPLSRFSSLQSQANITLRSVTFGGGRTKIGRDGIAAILQMLTTNETVTQLGIYDDQSLRPDDFVRIFKSLQKNASLRQLSLQGCKGVRGELVQQAIMETLQVNPWIEDIDLERTPLKNSGKADGIYQRLGQKGRSEPDIDLLKDMPLTEPKSCRVFFCGQEYAGKTTLCNSISQNFSSSKLPYIEQVRTLVNPVEQAVRPVGMKIKTLKDEDTRISIWNLAGQHEFYSLHDLMFPGHGSASCFLIISSLFRKPTNREPKTPEEIEEDLRYWLRFIVSNSRRAVQQCMLPNVTVVLTHYDKINQPSQDMQLTVSSIQRLKDKFQGFVDFYPTVFTIDARSSASVTKLTHHIRKTSRTILQRVPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFAELCQVKVPPLRIRSRHDNKDKVEMRRRAIATCLHHIGEVIYFDELGFLILDCEWFCSEVLSKLIKLEVRKQSSLENNGFTSRKELEKILRGSLQSQIPGMGSKVFENLEASDLVRMMLKLELCYEQDPSDPDSLLLIPSILEEGRGKPQKWQIDSPDCIYAGRHLECDDSSHMFLTPGFFPQFDCLQIQVHLHNRIMALKNQHGATYNLEKYLISIIINGIYIRVELGGQLGYYIDVLACSTKNLTETLRLIHQLIIPAIQSLCQGVTLTENILRPECVRNLTPPRYRKTQFVHVQLLKQALLSLPADSMYDYQHTWDLVSDSGKPILRAAFDLARDLLSDDDFREVLHRRYHDLHNLAVELQVPT**************GKVEPTFGGIAKEIQGLRYYEHRLLIELHRKVNYMANFNVQLEERKVPNMIYFVRTENYSRKLITNIISGMTALRLHMLCEFRREMHVVEDQMGCEIMQVDNRTVKSLAPYMTKFMKLLTFALKIGAHLATGMGQLIPDLSKEVAHLADSSLVYGAAGAVAAGAVGAVAMGRVE*********AGDIQQELIAVQQWVVDFLRERRCSTGKDIAEKFGLWRVRYRDDGHIAWICRRHMIVRAHEVIEVPI

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1363	2.2.26 [Sep-21-2011]
Q9FJ57		1380	Protein TORNADO 1 OS=Arab	yes	no	0.984	0.972	0.675	0.0
Q7RTR2		1065	Protein NLRC3 OS=Homo sap	yes	no	0.239	0.307	0.25	6e-13
Q5DU56		1064	Protein NLRC3 OS=Mus musc	yes	no	0.197	0.252	0.257	5e-11
P53355		1430	Death-associated protein	no	no	0.167	0.159	0.252	1e-09
Q80YE7		1442	Death-associated protein	no	no	0.167	0.158	0.252	5e-09
Q55E58		3184	Probable serine/threonine	no	no	0.203	0.086	0.227	6e-09
Q14BP6		391	Leucine-rich repeat-conta	no	no	0.168	0.585	0.244	4e-08
Q4V8D9		415	Leucine-rich repeat-conta	no	no	0.170	0.559	0.25	7e-08
Q9DAM1		415	Leucine-rich repeat-conta	no	no	0.151	0.498	0.260	1e-07
Q6XHB2		1726	Probable serine/threonine	no	no	0.266	0.210	0.220	5e-07

>sp\|Q9FJ57\|TRN1_ARATH Protein TORNADO 1 OS=Arabidopsis thaliana GN=TRN1 PE=2 SV=1	Back alignment and function desciption

 Score = 1908 bits (4942), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 940/1392 (67%), Positives = 1121/1392 (80%), Gaps = 50/1392 (3%)

Query: 5    NENLRDLQWLFQAIESES---LNLHNLSFFLSQPATGCHQETENSMNINIGKDTLLYFPH 61
            +++ +DL W  QAI+       NL  LSF  S   T C   TE+SMNIN+ +D L     
Sbjct: 6    DQSFKDLSWFLQAIKDPQQTFFNLQTLSFSSSGNTTHCQLITESSMNINVTRDNLTSLSQ 65

Query: 62   LLTLLVTAEKAHTSLKHLEFHSVEWEIEQMRILGLLLDCSSNVKQVVFRRNKFDAECLAE 121
            +   L T+ +  TSL++LEF  + WEIE ++ LGLLLD +S +KQ+ FR+N+F  +CL E
Sbjct: 66   IFIELATSLETQTSLRNLEFEGIFWEIELLQSLGLLLDNTSKIKQLAFRKNRFSEQCLNE 125

Query: 122  ISDVVRRNGVIKEVMFTESGIKNAGASLLASALKVNDTLEELQIWEDSIGSKGAEELSKM 181
            +S++++RN  +KEVMF ES I   GA+LL SAL+VND+LEELQIWEDSIGSKGAEELS+M
Sbjct: 126  LSEILKRNRFLKEVMFLESSIGYRGATLLGSALQVNDSLEELQIWEDSIGSKGAEELSRM 185

Query: 182  IEANSTLKSLTIFDSSSLTATPLISAVLARNRAMEVHVWSGENG-EKSSKVVEFLPENGT 240
            IE NS+LK  +IFDSS  TATPLISAVL  NR MEVH+WSG++  ++S K+VEFLPE+ T
Sbjct: 186  IEMNSSLKLFSIFDSSPFTATPLISAVLGMNREMEVHMWSGDHKRDRSLKLVEFLPESKT 245

Query: 241  LRIYRLDVSGSCRVACSLGCNTTVKSLDMTGVRLKSRWAKEFRWVLQQNQSLKEVILSKT 300
            LRIY++D+SGSCRVA +LG NTTV+SLDMTG +L SRWAKEFRWVL+QN++L+EV LSKT
Sbjct: 246  LRIYQIDISGSCRVAAALGMNTTVRSLDMTGAKLNSRWAKEFRWVLEQNKTLREVKLSKT 305

Query: 301  CLKDKGVVYVAAGLFKNRSLESLYLHGNWFSGVGVEHLLCPLSRFSSLQSQANITLRSVT 360
             LKDK VVY+AAGLFKN+SL+SLY+ GN F  VGVE LLCPLSRFS+LQ QANITLRS+ 
Sbjct: 306  GLKDKAVVYIAAGLFKNKSLQSLYVDGNRFGSVGVEDLLCPLSRFSALQLQANITLRSIV 365

Query: 361  FGGGRTKIGRDGIAAILQMLTTNETVTQLGIYDDQSLRPDDFVRIFKSLQKNASLRQLSL 420
            FGG  TKIGRDG+ A+L+M+TTNETV  LGI+DD SL PDDF+ IFKSLQKNASLR+ SL
Sbjct: 366  FGGSNTKIGRDGLTAVLKMVTTNETVVHLGIHDDASLGPDDFIHIFKSLQKNASLRRFSL 425

Query: 421  QGCKGVRGELVQQAIMETLQVNPWIEDIDLERTPLKNSGKADGIYQRLGQKGR----SEP 476
            QGCKGVRG+ V +AI ETLQ+NP IE+IDL RTPL++SGKAD IYQ+LG  GR    +E 
Sbjct: 426  QGCKGVRGDRVLEAITETLQINPLIEEIDLARTPLQDSGKADEIYQKLGHNGRKIDEAET 485

Query: 477  DIDLLKDMPLTEPKSCRVFFCGQEYAGKTTLCNSISQNFSSSKLPYIEQVRTLVNPVEQA 536
            D D LKDMPLTEPKS R F CGQ YAGKTTLCNSI Q+ S+S  PY+E VR L+NPVEQ 
Sbjct: 486  D-DSLKDMPLTEPKSVRAFLCGQNYAGKTTLCNSILQSSSASGFPYVENVRNLMNPVEQV 544

Query: 537  VRPVG-MKIKTLKDEDTRISIWNLAGQHEFYSLHDLMFPGHGSASCFLIISSLFRKPTNR 595
            V+ VG MKIKT KDE+T+IS+WNLAGQHEF++LHDLMFP   S   FLI+ SLFRKP+N+
Sbjct: 545  VKTVGGMKIKTFKDEETKISMWNLAGQHEFFALHDLMFP---SPCFFLIVLSLFRKPSNK 601

Query: 596  EPKTPEEIEEDLRYWLRFIVSNSRRAVQQCMLPNVTVVLTHYDKINQPSQDMQLTVSSIQ 655
            EPKTP E+EE+L YWLRFIVSNSR+A+QQCM PNVT+VLTH +KIN  S+  Q TV  IQ
Sbjct: 602  EPKTPAEVEEELEYWLRFIVSNSRKAIQQCMKPNVTIVLTHSEKINLQSESFQATVGCIQ 661

Query: 656  RLKDKFQGFVDFYPTVFTIDARSSASVTKLTHHIRKTSRTILQRVPRVYQLCNDLIQILS 715
            RL+DKFQ  V+FYPTVFT+DARSS SV+KLTHHIR TS+ ILQRVPRVYQLCND++Q+LS
Sbjct: 662  RLRDKFQALVEFYPTVFTVDARSSPSVSKLTHHIRMTSKAILQRVPRVYQLCNDIVQLLS 721

Query: 716  DWRSENYNKPAMKWKEFAELCQVKVPPLRIRSRHDNKDKVEMRRRAIATCLHHIGEVIYF 775
            DWRSEN NKP M+WK FA+LCQ KVP LRI+SR++N   VE RR AIATCLH +GEVIYF
Sbjct: 722  DWRSENSNKPIMRWKAFADLCQFKVPSLRIKSRNENIQIVETRRHAIATCLHQMGEVIYF 781

Query: 776  DELGFLILDCEWFCSEVLSKLIKLEVRKQSSLENNGFTSRKELEKILRGSLQSQIPGMGS 835
            D+LGFLILD EWFC EVL++LIKL+VRKQS+ E NGF SRKELEK LR SLQS IPGM S
Sbjct: 782  DDLGFLILDYEWFCGEVLTQLIKLDVRKQSTGERNGFVSRKELEKTLRSSLQSPIPGMTS 841

Query: 836  KVFENLEASDLVRMMLKLELCYEQDPSDPDSLLLIPSILEEGRGKPQKWQIDSPDCIYAG 895
            KV E+ +A DLV+MM K+ELCYEQDPS PDS LL+PSILEEGRGK QKWQI++ DC+Y+G
Sbjct: 842  KVLEHFDACDLVKMMKKVELCYEQDPSSPDSSLLVPSILEEGRGKTQKWQINTHDCVYSG 901

Query: 896  RHLECDDSSHMFLTPGFFPQFDCLQIQVHLHNRIMALKNQHGATYNLEKYLISIIINGIY 955
            RHL+CDDSSHMFLT GFFP     ++QVHLHNRIM LKNQHGATY+LEKYLI+I I+GI 
Sbjct: 902  RHLQCDDSSHMFLTAGFFP-----RLQVHLHNRIMELKNQHGATYSLEKYLIAITIHGIN 956

Query: 956  IRVELGGQLGYYIDVLACSTKNLTETLRLIHQLIIPAIQSLCQGVTLTENILRPECVRNL 1015
            IRVELGGQLG YIDVLACS+K+LTETLRLIHQLIIPAIQS C+GV L E+I+RP+CV++L
Sbjct: 957  IRVELGGQLGNYIDVLACSSKSLTETLRLIHQLIIPAIQSSCRGVILLEHIIRPQCVQDL 1016

Query: 1016 TPPRYRKTQFVHVQLLKQALLSLPADSMYDYQHTWDLVSDSGKPILRAAFDLARDLLSDD 1075
            TPPR+R++QFV +  LK+AL S+PA++MYDYQHTWD V DSGK +LRA FDLAR+LLSDD
Sbjct: 1017 TPPRFRQSQFVSLHRLKEALSSVPAETMYDYQHTWDSVLDSGKTVLRAGFDLARNLLSDD 1076

Query: 1076 DFREVLHRRYHDLHNLAVELQVPTENNPEEPD--PSNEPDGKVEPTFGGIAK-------- 1125
            DFREVL RRYHDLHNLA ELQVPT+ NPE  +  P      KV+P+FGGIAK        
Sbjct: 1077 DFREVLQRRYHDLHNLAQELQVPTDENPEADNHVPVTNELEKVDPSFGGIAKGVEAVLQR 1136

Query: 1126 -------------EIQGLRYYEHRLLIELHRKVNYMANFNVQLEERKVPNMIYFVRTENY 1172
                         EIQGLRYYEHRLLI+LH KVNY+ N+NVQ++ERKVPNM YF+R ENY
Sbjct: 1137 LKIIEQEIRDLKQEIQGLRYYEHRLLIQLHHKVNYLVNYNVQMDERKVPNMFYFIRAENY 1196

Query: 1173 SRKLITNIISGMTALRLHMLCEFRREMHVVEDQMGCEIMQVDNRTVKSLAPYMTKFMKLL 1232
             R+LIT+++ GM ALR+HMLCEFRREMHVVEDQ+GC++MQ+DN+ VK LAPYMT FMKL+
Sbjct: 1197 GRRLITSMVPGMVALRIHMLCEFRREMHVVEDQLGCDVMQIDNQAVKCLAPYMTNFMKLV 1256

Query: 1233 TFALKIGAHLATGMGQLIPDLSKEVAHLADSSLVYGAAGAVAAGAVGAVAMGRVEGSRNR 1292
            TFAL+IGA+ A GMG +IPDLS  +AHLA+         AV  GA GA     V  +  R
Sbjct: 1257 TFALRIGANWAAGMGHMIPDLSHTIAHLANP--------AVMTGAAGAAGAIGVAAALGR 1308

Query: 1293 SRSRAGDI-QQELIAVQQWVVDFLRERRCSTGKDIAEKFGLWRVRYRDDGHIAWICRRHM 1351
            +R R  DI +QE  A QQW++D+LRE+ CSTG+DIAEKFGLWRVRYRDDG IAWIC+RHM
Sbjct: 1309 NRGRDRDIQEQEQRAAQQWLIDYLREQTCSTGRDIAEKFGLWRVRYRDDGSIAWICKRHM 1368

Query: 1352 IVRAHEVIEVPI 1363
            I RAHEVI+VP+
Sbjct: 1369 ITRAHEVIQVPL 1380

Involved in the basipetal transport of auxin (IAA) that modulates growth and organs organization. Required for initial divisions in the epidermal/lateral root cap leading to the formation of epidermal cells and a clone of lateral root cap cells, as well as for the maintenance of the radial pattern of cell specification in the root, thus regulating the distinction between the lateral root cap and epidermis.
Arabidopsis thaliana (taxid: 3702)

>sp\|Q7RTR2\|NLRC3_HUMAN Protein NLRC3 OS=Homo sapiens GN=NLRC3 PE=2 SV=2	Back alignment and function description

>sp\|Q5DU56\|NLRC3_MOUSE Protein NLRC3 OS=Mus musculus GN=Nlrc3 PE=2 SV=2	Back alignment and function description

>sp\|P53355\|DAPK1_HUMAN Death-associated protein kinase 1 OS=Homo sapiens GN=DAPK1 PE=1 SV=6	Back alignment and function description

>sp\|Q80YE7\|DAPK1_MOUSE Death-associated protein kinase 1 OS=Mus musculus GN=Dapk1 PE=1 SV=3	Back alignment and function description

>sp\|Q55E58\|PATS1_DICDI Probable serine/threonine-protein kinase pats1 OS=Dictyostelium discoideum GN=pats1 PE=3 SV=1	Back alignment and function description

>sp\|Q14BP6\|YV012_MOUSE Leucine-rich repeat-containing protein LOC400891 homolog OS=Mus musculus PE=2 SV=1	Back alignment and function description

>sp\|Q4V8D9\|LRC34_RAT Leucine-rich repeat-containing protein 34 OS=Rattus norvegicus GN=Lrrc34 PE=1 SV=1	Back alignment and function description

>sp\|Q9DAM1\|LRC34_MOUSE Leucine-rich repeat-containing protein 34 OS=Mus musculus GN=Lrrc34 PE=2 SV=1	Back alignment and function description

>sp\|Q6XHB2\|ROCO4_DICDI Probable serine/threonine-protein kinase roco4 OS=Dictyostelium discoideum GN=roco4 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1363
225460781		1386	PREDICTED: uncharacterized protein LOC10	0.992	0.976	0.794	0.0
255576300		1384	conserved hypothetical protein [Ricinus	0.993	0.978	0.790	0.0
147783405		1400	hypothetical protein VITISV_003518 [Viti	0.994	0.968	0.782	0.0
224061135		1404	predicted protein [Populus trichocarpa]	0.996	0.967	0.767	0.0
356524328		1378	PREDICTED: uncharacterized protein LOC10	0.991	0.980	0.766	0.0
356569665		1378	PREDICTED: uncharacterized protein LOC10	0.990	0.979	0.761	0.0
357459937		1380	Nucleotide-binding oligomerization domai	0.990	0.978	0.746	0.0
449466927		1373	PREDICTED: uncharacterized protein LOC10	0.987	0.980	0.703	0.0
15240531		1380	protein tornado 1 [Arabidopsis thaliana]	0.984	0.972	0.675	0.0
297796433		1388	hypothetical protein ARALYDRAFT_495640 [	0.988	0.970	0.673	0.0

>gi\|225460781\|ref\|XP_002276411.1\| PREDICTED: uncharacterized protein LOC100246876 [Vitis vinifera]	Back alignment and taxonomy information

 Score = 2277 bits (5901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1104/1389 (79%), Positives = 1245/1389 (89%), Gaps = 36/1389 (2%)

Query: 5    NENLRDLQWLFQAIESESLNLHNLSFFLSQPATGCHQETENSMNINIGKDTLLYFPHLLT 64
            ++N RDLQW+ Q I+S +++LH++SF+LSQP +GC+QETENSMN+NI KD++LYF  LLT
Sbjct: 4    SQNFRDLQWVLQVIKSGNISLHSISFYLSQPTSGCYQETENSMNVNISKDSILYFSQLLT 63

Query: 65   LLVTAEKAHTSLKHLEFHSVEWEIEQMRILGLLLDCSSNVKQVVFRRNKFDAECLAEISD 124
            +L TA+ +  SL++LEFH VEWE +Q+R LG++L+ + N+KQ++FRRN+ + ECL E+S+
Sbjct: 64   VLATAKDSQESLRNLEFHHVEWEAQQLRNLGMVLENNLNIKQLMFRRNRLNVECLWELSE 123

Query: 125  VVRRNGVIKEVMFTESGIKNAGASLLASALKVNDTLEELQIWEDSIGSKGAEELSKMIEA 184
            +++RNGVIKE+MF+ES I  AGA LLASALKVND+LEELQIWEDSIGSKGAEELSKMIE 
Sbjct: 124  ILKRNGVIKEIMFSESAIGAAGAGLLASALKVNDSLEELQIWEDSIGSKGAEELSKMIEV 183

Query: 185  NSTLKSLTIFDSSSLTATPLISAVLARNRAMEVHVWSGENGEKSSKVVEFLPENGTLRIY 244
            NSTLK LTIFDS+S+TATPLISAVLARNRAMEVH+WSGE GEKSSKVVEF+PEN TLRIY
Sbjct: 184  NSTLKLLTIFDSNSITATPLISAVLARNRAMEVHIWSGEKGEKSSKVVEFVPENSTLRIY 243

Query: 245  RLDVSGSCRVACSLGCNTTVKSLDMTGVRLKSRWAKEFRWVLQQNQSLKEVILSKTCLKD 304
            RLD+SG+CRVAC+LG N+TVKSLD+TGVRL+SRWAKEFR VL+QNQSLKEV LSKTCLKD
Sbjct: 244  RLDISGACRVACALGWNSTVKSLDLTGVRLRSRWAKEFRLVLEQNQSLKEVTLSKTCLKD 303

Query: 305  KGVVYVAAGLFKNRSLESLYLHGNWFSGVGVEHLLCPLSRFSSLQSQANITLRSVTFGGG 364
            KGVVYVAAGLFKN+SLESLYL GNWF+G+GVEHLLCPLSRFS+LQ QAN+TL+SVTFGGG
Sbjct: 304  KGVVYVAAGLFKNQSLESLYLDGNWFTGIGVEHLLCPLSRFSALQYQANVTLKSVTFGGG 363

Query: 365  RTKIGRDGIAAILQMLTTNETVTQLGIYDDQSLRPDDFVRIFKSLQKNASLRQLSLQGCK 424
            RTKIGRDG+AAILQMLTTN++VT+LGI DD+SLR +D V+IF+SL++NA+LR LSLQGCK
Sbjct: 364  RTKIGRDGLAAILQMLTTNQSVTRLGIQDDESLRQEDIVKIFRSLERNATLRHLSLQGCK 423

Query: 425  GVRGELVQQAIMETLQVNPWIEDIDLERTPLKNSGKADGIYQRLGQKGRSEPDIDLLKDM 484
            GV GELV Q IMETLQVNPWIEDIDL RTPL+NSG+ DGIYQ+LGQ GR+EP+IDLLKDM
Sbjct: 424  GVGGELVLQTIMETLQVNPWIEDIDLTRTPLQNSGQTDGIYQKLGQNGRTEPEIDLLKDM 483

Query: 485  PLTEPKSCRVFFCGQEYAGKTTLCNSISQNFSSSKLPYIEQVRTLVNPVEQAVRPVGMKI 544
            PLT PKSCRVFFCGQEYAGKTTLCNSISQNFSSSKLPY++QVRTLVNPVEQAVR  GMK+
Sbjct: 484  PLTVPKSCRVFFCGQEYAGKTTLCNSISQNFSSSKLPYMDQVRTLVNPVEQAVRTAGMKV 543

Query: 545  KTLKDEDTRISIWNLAGQHEFYSLHDLMFPGHGSASCFLIISSLFRKPTNREPKTPEEIE 604
            KT KDEDT+ISIWNLAGQHEFYSLHDLMFPGHGSAS FLI+SSLFRKPTNRE KTP EIE
Sbjct: 544  KTFKDEDTKISIWNLAGQHEFYSLHDLMFPGHGSASFFLIVSSLFRKPTNRESKTPAEIE 603

Query: 605  EDLRYWLRFIVSNSRRAVQQCMLPNVTVVLTHYDKINQPSQDMQLTVSSIQRLKDKFQGF 664
            EDL+YWLRFIVSNSRRA QQCMLPNVTVVLTHYDKINQPSQD Q TV+SIQRL+DKFQGF
Sbjct: 604  EDLQYWLRFIVSNSRRAAQQCMLPNVTVVLTHYDKINQPSQDFQATVNSIQRLRDKFQGF 663

Query: 665  VDFYPTVFTIDARSSASVTKLTHHIRKTSRTILQRVPRVYQLCNDLIQILSDWRSENYNK 724
            VDFYPTVFT+DARSSASV+KLTHH+RKTS+T+LQRVPRVY+LCNDLIQILSDWR+ENYNK
Sbjct: 664  VDFYPTVFTVDARSSASVSKLTHHLRKTSKTVLQRVPRVYELCNDLIQILSDWRTENYNK 723

Query: 725  PAMKWKEFAELCQVKVPPLRIRSRHDNKDKVEMRRRAIATCLHHIGEVIYFDELGFLILD 784
            PAMKWKEF ELCQVKVP LRIRSRHDNK+KV MRRRAIA CLHHIGEVIYF+ELGFLILD
Sbjct: 724  PAMKWKEFDELCQVKVPSLRIRSRHDNKEKVGMRRRAIANCLHHIGEVIYFNELGFLILD 783

Query: 785  CEWFCSEVLSKLIKLEVRKQSSLENNGFTSRKELEKILRGSLQSQIPGMGSKVFENLEAS 844
            CEWFC EVL +LI+L+ RKQS+ E NGF +RKELEKILRGSLQSQIPGMGSKVFENLEAS
Sbjct: 784  CEWFCGEVLGQLIRLDARKQSTTE-NGFITRKELEKILRGSLQSQIPGMGSKVFENLEAS 842

Query: 845  DLVRMMLKLELCYEQDPSDPDSLLLIPSILEEGRGKPQKWQIDSPDCIYAGRHLECDDSS 904
            DLVRMMLKLELCYEQDPSDP+SLLLIPSILEEGRG+PQ+WQ+ +PDC+Y+GRHLECDDSS
Sbjct: 843  DLVRMMLKLELCYEQDPSDPNSLLLIPSILEEGRGRPQRWQLIAPDCVYSGRHLECDDSS 902

Query: 905  HMFLTPGFFPQFDCLQIQVHLHNRIMALKNQHGATYNLEKYLISIIINGIYIRVELGGQL 964
            HMFLTPGFFP     ++QVHLHNR+M LK+QHGATY+LEKYLI I INGIY+R+ELGGQL
Sbjct: 903  HMFLTPGFFP-----RLQVHLHNRVMGLKHQHGATYSLEKYLILININGIYVRIELGGQL 957

Query: 965  GYYIDVLACSTKNLTETLRLIHQLIIPAIQSLCQGVTLTENILRPECVRNLTPPRYRKTQ 1024
            G+YID+LACSTKNLTETLRL  QLIIPAIQSLC GVTL E+I+RPECVRNL PPRYRKTQ
Sbjct: 958  GHYIDILACSTKNLTETLRLFQQLIIPAIQSLCHGVTLHESIIRPECVRNLMPPRYRKTQ 1017

Query: 1025 FVHVQLLKQALLSLPADSMYDYQHTWDLVSDSGKPILRAAFDLARDLLSDDDFREVLHRR 1084
            FV +Q+LKQALLS+PA+ MYDYQHTW  VSDSG+PILRA FD ARDLLSDDDFREVLHRR
Sbjct: 1018 FVPLQVLKQALLSVPAEGMYDYQHTWASVSDSGRPILRAGFDFARDLLSDDDFREVLHRR 1077

Query: 1085 YHDLHNLAVELQVPTENNP---EEPDPSNEPDGKVEPTFGGIAK---------------- 1125
            YHDL+NLAVELQV  E N    + P  + E   KVEPTFGGIAK                
Sbjct: 1078 YHDLYNLAVELQVSPEANTDGLDNPASAMEEQDKVEPTFGGIAKGVEAVLQRLKIIEQEI 1137

Query: 1126 -----EIQGLRYYEHRLLIELHRKVNYMANFNVQLEERKVPNMIYFVRTENYSRKLITNI 1180
                 EIQGLRYYEHRLLIELHRKVNY+ N+NVQLEERKVPNM YFVRTENYSR+L+TN+
Sbjct: 1138 RDLKQEIQGLRYYEHRLLIELHRKVNYLVNYNVQLEERKVPNMFYFVRTENYSRRLVTNM 1197

Query: 1181 ISGMTALRLHMLCEFRREMHVVEDQMGCEIMQVDNRTVKSLAPYMTKFMKLLTFALKIGA 1240
            ISGMTALRLHMLCEFRREMHVVEDQMGCE+M +DN TVKSLAPYM KFMKLLTFALKIGA
Sbjct: 1198 ISGMTALRLHMLCEFRREMHVVEDQMGCEMMHIDNMTVKSLAPYMKKFMKLLTFALKIGA 1257

Query: 1241 HLATGMGQLIPDLSKEVAHLADSSLVYGAAGAVAAGAVGAVAMGRVEG--SRNRSRSRAG 1298
            HLA GMG++IPDLS+EVAHL + SL+YGAAGAVAAGAVGA A+ RV G  SRNR+RS  G
Sbjct: 1258 HLAAGMGEMIPDLSREVAHLVEPSLMYGAAGAVAAGAVGAAAVSRVAGSSSRNRARSLGG 1317

Query: 1299 ----DIQQELIAVQQWVVDFLRERRCSTGKDIAEKFGLWRVRYRDDGHIAWICRRHMIVR 1354
                D  Q+L A QQWVVDFLR+RRCSTG++IAEKFGLWRVRYRD+G IAWICRRHM  R
Sbjct: 1318 ESTRDFHQDLRAAQQWVVDFLRDRRCSTGREIAEKFGLWRVRYRDNGQIAWICRRHMNTR 1377

Query: 1355 AHEVIEVPI 1363
            +HE+IEVPI
Sbjct: 1378 SHEIIEVPI 1386

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255576300\|ref\|XP_002529043.1\| conserved hypothetical protein [Ricinus communis] gi\|223531523\|gb\|EEF33354.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

>gi\|147783405\|emb\|CAN75217.1\| hypothetical protein VITISV_003518 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224061135\|ref\|XP_002300355.1\| predicted protein [Populus trichocarpa] gi\|222847613\|gb\|EEE85160.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356524328\|ref\|XP_003530781.1\| PREDICTED: uncharacterized protein LOC100817598 [Glycine max]	Back alignment and taxonomy information

>gi\|356569665\|ref\|XP_003553018.1\| PREDICTED: uncharacterized protein LOC100784182 [Glycine max]	Back alignment and taxonomy information

>gi\|357459937\|ref\|XP_003600250.1\| Nucleotide-binding oligomerization domain-containing protein [Medicago truncatula] gi\|355489298\|gb\|AES70501.1\| Nucleotide-binding oligomerization domain-containing protein [Medicago truncatula]	Back alignment and taxonomy information

>gi\|449466927\|ref\|XP_004151177.1\| PREDICTED: uncharacterized protein LOC101215001 [Cucumis sativus] gi\|449518529\|ref\|XP_004166294.1\| PREDICTED: uncharacterized protein LOC101226912 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|15240531\|ref\|NP_200365.1\| protein tornado 1 [Arabidopsis thaliana] gi\|75262539\|sp\|Q9FJ57.1\|TRN1_ARATH RecName: Full=Protein TORNADO 1; AltName: Full=Protein LOPPED 1 gi\|9758186\|dbj\|BAB08571.1\| unnamed protein product [Arabidopsis thaliana] gi\|332009261\|gb\|AED96644.1\| protein tornado 1 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297796433\|ref\|XP_002866101.1\| hypothetical protein ARALYDRAFT_495640 [Arabidopsis lyrata subsp. lyrata] gi\|297311936\|gb\|EFH42360.1\| hypothetical protein ARALYDRAFT_495640 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1363
TAIR\|locus:2173952		1380	TRN1 "AT5G55540" [Arabidopsis	0.819	0.809	0.655	0.0
UNIPROTKB\|Q7RTR2		1065	NLRC3 "Protein NLRC3" [Homo sa	0.245	0.313	0.243	4.2e-12
TAIR\|locus:2194604		605	emb2004 "embryo defective 2004	0.278	0.626	0.237	1e-11
MGI\|MGI:2444070		1064	Nlrc3 "NLR family, CARD domain	0.214	0.275	0.25	1.8e-11
MGI\|MGI:1921935		391	4930451C15Rik "RIKEN cDNA 4930	0.166	0.580	0.246	2.8e-11
RGD\|1565052		415	Lrrc34 "leucine rich repeat co	0.170	0.559	0.254	1.1e-08
MGI\|MGI:1919077		415	Lrrc34 "leucine rich repeat co	0.151	0.498	0.264	4e-08
RGD\|1311629		1430	Dapk1 "death associated protei	0.193	0.184	0.255	1e-07
UNIPROTKB\|F1LN68		1442	Dapk1 "Protein Dapk1" [Rattus	0.193	0.183	0.255	1.1e-07
UNIPROTKB\|F1NUX5		1347	F1NUX5 "Uncharacterized protei	0.144	0.146	0.286	1.5e-07

TAIR\|locus:2173952 TRN1 "AT5G55540" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3821 (1350.1 bits), Expect = 0., Sum P(2) = 0.
 Identities = 745/1137 (65%), Positives = 890/1137 (78%)

Query:     5 NENLRDLQWLFQAIXXXXXXXXXXXXXXXQPA---TGCHQETENSMNINIGKDXXXXXXX 61
             +++ +DL W  QAI                 +   T C   TE+SMNIN+ +D       
Sbjct:     6 DQSFKDLSWFLQAIKDPQQTFFNLQTLSFSSSGNTTHCQLITESSMNINVTRDNLTSLSQ 65

Query:    62 XXXXXXXAEKAHTSLKHLEFHSVEWEIEQMRILGLLLDCSSNVKQVVFRRNKFDAECLAE 121
                    + +  TSL++LEF  + WEIE ++ LGLLLD +S +KQ+ FR+N+F  +CL E
Sbjct:    66 IFIELATSLETQTSLRNLEFEGIFWEIELLQSLGLLLDNTSKIKQLAFRKNRFSEQCLNE 125

Query:   122 ISDVVRRNGVIKEVMFTESGIKNAGASLLASALKVNDTLEELQIWEDSIGSKGAEELSKM 181
             +S++++RN  +KEVMF ES I   GA+LL SAL+VND+LEELQIWEDSIGSKGAEELS+M
Sbjct:   126 LSEILKRNRFLKEVMFLESSIGYRGATLLGSALQVNDSLEELQIWEDSIGSKGAEELSRM 185

Query:   182 IEANSTLKSLTIFDSSSLTATPLISAVLARNRAMEVHVWSGENG-EKSSKVVEFLPENGT 240
             IE NS+LK  +IFDSS  TATPLISAVL  NR MEVH+WSG++  ++S K+VEFLPE+ T
Sbjct:   186 IEMNSSLKLFSIFDSSPFTATPLISAVLGMNREMEVHMWSGDHKRDRSLKLVEFLPESKT 245

Query:   241 LRIYRLDVSGSCRVACSLGCNTTVKSLDMTGVRLKSRWAKEFRWVLQQNQSLKEVILSKT 300
             LRIY++D+SGSCRVA +LG NTTV+SLDMTG +L SRWAKEFRWVL+QN++L+EV LSKT
Sbjct:   246 LRIYQIDISGSCRVAAALGMNTTVRSLDMTGAKLNSRWAKEFRWVLEQNKTLREVKLSKT 305

Query:   301 CLKDKGVVYVAAGLFKNRSLESLYLHGNWFSGVGVEHLLCPLSRFSSLQSQANITLRSVT 360
              LKDK VVY+AAGLFKN+SL+SLY+ GN F  VGVE LLCPLSRFS+LQ QANITLRS+ 
Sbjct:   306 GLKDKAVVYIAAGLFKNKSLQSLYVDGNRFGSVGVEDLLCPLSRFSALQLQANITLRSIV 365

Query:   361 FGGGRTKIGRDGIAAILQMLTTNETVTQLGIYDDQSLRPDDFVRIFKSLQKNASLRQLSL 420
             FGG  TKIGRDG+ A+L+M+TTNETV  LGI+DD SL PDDF+ IFKSLQKNASLR+ SL
Sbjct:   366 FGGSNTKIGRDGLTAVLKMVTTNETVVHLGIHDDASLGPDDFIHIFKSLQKNASLRRFSL 425

Query:   421 QGCKGVRGELVQQAIMETLQVNPWIEDIDLERTPLKNSGKADGIYQRLGQKGR----SEP 476
             QGCKGVRG+ V +AI ETLQ+NP IE+IDL RTPL++SGKAD IYQ+LG  GR    +E 
Sbjct:   426 QGCKGVRGDRVLEAITETLQINPLIEEIDLARTPLQDSGKADEIYQKLGHNGRKIDEAET 485

Query:   477 DIDLLKDMPLTEPKSCRVFFCGQEYAGKTTLCNSISQNFSSSKLPYIEQVRTLVNPVEQA 536
             D D LKDMPLTEPKS R F CGQ YAGKTTLCNSI Q+ S+S  PY+E VR L+NPVEQ 
Sbjct:   486 D-DSLKDMPLTEPKSVRAFLCGQNYAGKTTLCNSILQSSSASGFPYVENVRNLMNPVEQV 544

Query:   537 VRPVG-MKIKTLKDEDTRISIWNLAGQHEFYSLHDLMFPGHGSASCFLIISSLFRKPTNR 595
             V+ VG MKIKT KDE+T+IS+WNLAGQHEF++LHDLMFP   S   FLI+ SLFRKP+N+
Sbjct:   545 VKTVGGMKIKTFKDEETKISMWNLAGQHEFFALHDLMFP---SPCFFLIVLSLFRKPSNK 601

Query:   596 EPKTPEEIEEDLRYWLRFIVSNSRRAVQQCMLPNVTVVLTHYDKINQPSQDMQLTVSSIQ 655
             EPKTP E+EE+L YWLRFIVSNSR+A+QQCM PNVT+VLTH +KIN  S+  Q TV  IQ
Sbjct:   602 EPKTPAEVEEELEYWLRFIVSNSRKAIQQCMKPNVTIVLTHSEKINLQSESFQATVGCIQ 661

Query:   656 RLKDKFQGFVDFYPTVFTIDARSSASVTKLTHHIRKTSRTILQRVPRVYQLCNDLIQILS 715
             RL+DKFQ  V+FYPTVFT+DARSS SV+KLTHHIR TS+ ILQRVPRVYQLCND++Q+LS
Sbjct:   662 RLRDKFQALVEFYPTVFTVDARSSPSVSKLTHHIRMTSKAILQRVPRVYQLCNDIVQLLS 721

Query:   716 DWRSENYNKPAMKWKEFAELCQVKVPPLRIRSRHDNKDKVEMRRRAIATCLHHIGEVIYF 775
             DWRSEN NKP M+WK FA+LCQ KVP LRI+SR++N   VE RR AIATCLH +GEVIYF
Sbjct:   722 DWRSENSNKPIMRWKAFADLCQFKVPSLRIKSRNENIQIVETRRHAIATCLHQMGEVIYF 781

Query:   776 DELGFLILDCEWFCSEVLSKLIKLEVRKQSSLENNGFTSRKELEKILRGSLQSQIPGMGS 835
             D+LGFLILD EWFC EVL++LIKL+VRKQS+ E NGF SRKELEK LR SLQS IPGM S
Sbjct:   782 DDLGFLILDYEWFCGEVLTQLIKLDVRKQSTGERNGFVSRKELEKTLRSSLQSPIPGMTS 841

Query:   836 KVFENLEASDLVRMMLKLELCYEQDPSDPDSLLLIPSILEEGRGKPQKWQIDSPDCIYAG 895
             KV E+ +A DLV+MM K+ELCYEQDPS PDS LL+PSILEEGRGK QKWQI++ DC+Y+G
Sbjct:   842 KVLEHFDACDLVKMMKKVELCYEQDPSSPDSSLLVPSILEEGRGKTQKWQINTHDCVYSG 901

Query:   896 RHLECDDSSHMFLTPGFFPQFDCLQIQVHLHNRIMALKNQHGATYNLEKYLXXXXXXXXX 955
             RHL+CDDSSHMFLT GFFP+     +QVHLHNRIM LKNQHGATY+LEKYL         
Sbjct:   902 RHLQCDDSSHMFLTAGFFPR-----LQVHLHNRIMELKNQHGATYSLEKYLIAITIHGIN 956

Query:   956 XRVELGGQLGYYIDVLACSTKNLTETLRLIHQLIIPAIQSLCQGVTLTENILRPECVRNL 1015
              RVELGGQLG YIDVLACS+K+LTETLRLIHQLIIPAIQS C+GV L E+I+RP+CV++L
Sbjct:   957 IRVELGGQLGNYIDVLACSSKSLTETLRLIHQLIIPAIQSSCRGVILLEHIIRPQCVQDL 1016

Query:  1016 TPPRYRKTQFVHVQLLKQALLSLPADSMYDYQHTWDLVSDSGKPIXXXXXXXXXXXXXXX 1075
             TPPR+R++QFV +  LK+AL S+PA++MYDYQHTWD V DSGK +               
Sbjct:  1017 TPPRFRQSQFVSLHRLKEALSSVPAETMYDYQHTWDSVLDSGKTVLRAGFDLARNLLSDD 1076

Query:  1076 XXXEVLHRRYHDLHNLAVELQVPTXXXXXXXXXX--XXXXGKVEPTFGGIAKEIQGL 1130
                EVL RRYHDLHNLA ELQVPT                 KV+P+FGGIAK ++ +
Sbjct:  1077 DFREVLQRRYHDLHNLAQELQVPTDENPEADNHVPVTNELEKVDPSFGGIAKGVEAV 1133

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0009933 "meristem structural organization" evidence=IMP

GO:0009956 "radial pattern formation" evidence=IMP

GO:0009926 "auxin polar transport" evidence=IGI;IDA

GO:0010305 "leaf vascular tissue pattern formation" evidence=IMP

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=IMP;RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0010540 "basipetal auxin transport" evidence=IMP

UNIPROTKB\|Q7RTR2 NLRC3 "Protein NLRC3" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

TAIR\|locus:2194604 emb2004 "embryo defective 2004" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

MGI\|MGI:2444070 Nlrc3 "NLR family, CARD domain containing 3" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

MGI\|MGI:1921935 4930451C15Rik "RIKEN cDNA 4930451C15 gene" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|1565052 Lrrc34 "leucine rich repeat containing 34" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

MGI\|MGI:1919077 Lrrc34 "leucine rich repeat containing 34" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|1311629 Dapk1 "death associated protein kinase 1" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|F1LN68 Dapk1 "Protein Dapk1" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NUX5 F1NUX5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FJ57	TRN1_ARATH	No assigned EC number	0.6752	0.9845	0.9724	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00027211001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (1362 aa)
		(Vitis vinifera)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1363
cd00116		319	cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo	8e-10
cd00116		319	cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo	2e-07
cd00116		319	cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo	2e-04
cd09914		161	cd09914, RocCOR, Ras of complex proteins (Roc) C-t	2e-04
COG1100		219	COG1100, COG1100, GTPase SAR1 and related small G	4e-04

>gnl\|CDD\|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily	Back alignment and domain information

 Score = 61.6 bits (150), Expect = 8e-10
 Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 13/187 (6%)

Query: 74  TSLKHLEFHSVEWEIEQMRIL-GLLLDCSSNVKQVVFRRNKFDAECLAEISDVVRRNGVI 132
           +SL+ L+ ++       +R+L   L D    ++++V  RN+ +      ++  +R N  +
Sbjct: 108 SSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDL 167

Query: 133 KEVMFTESGIKNAGASLLASALKVNDTLEELQIWEDSIGSKGAEELSKMIEANSTLKSLT 192
           KE+    +GI +AG   LA  LK N  LE L +  + +  +GA  L+   E  ++LKSL 
Sbjct: 168 KELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALA---ETLASLKSLE 224

Query: 193 I--FDSSSLTATP---LISAVLARNRAM-EVHVWSGENGEKSSK-VVEFLPENGTLRIYR 245
           +     ++LT      L SA+L+ N ++  + +   +  +  +K + E L E  +L    
Sbjct: 225 VLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLL--E 282

Query: 246 LDVSGSC 252
           LD+ G+ 
Sbjct: 283 LDLRGNK 289

LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319

>gnl\|CDD\|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily	Back alignment and domain information

>gnl\|CDD\|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily	Back alignment and domain information

>gnl\|CDD\|206741 cd09914, RocCOR, Ras of complex proteins (Roc) C-terminal of Roc (COR) domain family	Back alignment and domain information

>gnl\|CDD\|224025 COG1100, COG1100, GTPase SAR1 and related small G proteins [General function prediction only]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1363
cd00116		319	LRR_RI Leucine-rich repeats (LRRs), ribonuclease i	99.93
KOG1909		382	consensus Ran GTPase-activating protein [RNA proce	99.91
cd00116		319	LRR_RI Leucine-rich repeats (LRRs), ribonuclease i	99.91
KOG1909		382	consensus Ran GTPase-activating protein [RNA proce	99.89
KOG0092		200	consensus GTPase Rab5/YPT51 and related small G pr	99.85
KOG0094		221	consensus GTPase Rab6/YPT6/Ryh1, small G protein s	99.84
KOG0078		207	consensus GTP-binding protein SEC4, small G protei	99.81
KOG0084		205	consensus GTPase Rab1/YPT1, small G protein superf	99.8
cd04121		189	Rab40 Rab40 subfamily. This subfamily contains Rab	99.78
cd04120		202	Rab12 Rab12 subfamily. Rab12 was first identified	99.78
cd04172		182	Rnd3_RhoE_Rho8 Rnd3/RhoE/Rho8 subfamily. Rnd3/RhoE	99.77
cd04133		176	Rop_like Rop subfamily. The Rop (Rho-related prote	99.77
cd04131		178	Rnd Rnd subfamily. The Rnd subfamily contains Rnd1	99.76
cd01874		175	Cdc42 Cdc42 subfamily. Cdc42 is an essential GTPas	99.76
KOG0095		213	consensus GTPase Rab30, small G protein superfamil	99.76
KOG0098		216	consensus GTPase Rab2, small G protein superfamily	99.76
cd04174		232	Rnd1_Rho6 Rnd1/Rho6 subfamily. Rnd1/Rho6 is a memb	99.76
KOG4194		873	consensus Membrane glycoprotein LIG-1 [Signal tran	99.75
KOG0088		218	consensus GTPase Rab21, small G protein superfamil	99.75
cd01875		191	RhoG RhoG subfamily. RhoG is a GTPase with high se	99.75
cd04128		182	Spg1 Spg1p. Spg1p (septum-promoting GTPase) was fi	99.75
KOG0444		1255	consensus Cytoskeletal regulator Flightless-I (con	99.74
PLN00113		968	leucine-rich repeat receptor-like protein kinase;	99.74
KOG0444		1255	consensus Cytoskeletal regulator Flightless-I (con	99.74
KOG0080		209	consensus GTPase Rab18, small G protein superfamil	99.73
cd04127		180	Rab27A Rab27a subfamily. The Rab27a subfamily cons	99.73
KOG0087		222	consensus GTPase Rab11/YPT3, small G protein super	99.73
KOG0093		193	consensus GTPase Rab3, small G protein superfamily	99.73
PLN00113		968	leucine-rich repeat receptor-like protein kinase;	99.73
cd01871		174	Rac1_like Rac1-like subfamily. The Rac1-like subfa	99.73
KOG0079		198	consensus GTP-binding protein H-ray, small G prote	99.73
cd04173		222	Rnd2_Rho7 Rnd2/Rho7 subfamily. Rnd2/Rho7 is a memb	99.73
cd04107		201	Rab32_Rab38 Rab38/Rab32 subfamily. Rab32 and Rab38	99.73
cd04108		170	Rab36_Rab34 Rab34/Rab36 subfamily. Rab34, found pr	99.72
cd04122		166	Rab14 Rab14 subfamily. Rab14 GTPases are localized	99.72
cd04119		168	RJL RJL (RabJ-Like) subfamily. RJLs are found in m	99.72
cd01865		165	Rab3 Rab3 subfamily. The Rab3 subfamily contains R	99.72
cd04109		215	Rab28 Rab28 subfamily. First identified in maize,	99.71
cd04117		161	Rab15 Rab15 subfamily. Rab15 colocalizes with the	99.71
KOG4308		478	consensus LRR-containing protein [Function unknown	99.71
KOG0086		214	consensus GTPase Rab4, small G protein superfamily	99.71
KOG0081		219	consensus GTPase Rab27, small G protein superfamil	99.71
cd01867		167	Rab8_Rab10_Rab13_like Rab8/Sec4/Ypt2. Rab8/Sec4/Yp	99.71
cd04134		189	Rho3 Rho3 subfamily. Rho3 is a member of the Rho f	99.71
cd01864		165	Rab19 Rab19 subfamily. Rab19 proteins are associat	99.71
PF00071		162	Ras: Ras family; InterPro: IPR001806 Small GTPases	99.7
cd04118		193	Rab24 Rab24 subfamily. Rab24 is distinct from othe	99.7
cd04102		202	RabL3 RabL3 (Rab-like3) subfamily. RabL3s are nove	99.7
cd04132		187	Rho4_like Rho4-like subfamily. Rho4 is a GTPase th	99.7
cd04106		162	Rab23_lke Rab23-like subfamily. Rab23 is a member	99.7
KOG4194		873	consensus Membrane glycoprotein LIG-1 [Signal tran	99.7
cd04110		199	Rab35 Rab35 subfamily. Rab35 is one of several Rab	99.7
KOG4308		478	consensus LRR-containing protein [Function unknown	99.7
PLN03071		219	GTP-binding nuclear protein Ran; Provisional	99.69
cd04126		220	Rab20 Rab20 subfamily. Rab20 is one of several Rab	99.69
cd04136		163	Rap_like Rap-like subfamily. The Rap subfamily con	99.69
smart00174		174	RHO Rho (Ras homology) subfamily of Ras-like small	99.69
cd01869		166	Rab1_Ypt1 Rab1/Ypt1 subfamily. Rab1 is found in ev	99.69
cd01866		168	Rab2 Rab2 subfamily. Rab2 is localized on cis-Golg	99.68
cd04141		172	Rit_Rin_Ric Rit/Rin/Ric subfamily. Rit (Ras-like p	99.68
cd04144		190	Ras2 Ras2 subfamily. The Ras2 subfamily, found exc	99.68
cd04113		161	Rab4 Rab4 subfamily. Rab4 has been implicated in n	99.68
cd04124		161	RabL2 RabL2 subfamily. RabL2 (Rab-like2) subfamily	99.68
cd04125		188	RabA_like RabA-like subfamily. RabA was first iden	99.68
cd00877		166	Ran Ran (Ras-related nuclear proteins) /TC4 subfam	99.68
cd01868		165	Rab11_like Rab11-like. Rab11a, Rab11b, and Rab25 a	99.68
cd04175		164	Rap1 Rap1 subgroup. The Rap1 subgroup is part of t	99.67
cd04111		211	Rab39 Rab39 subfamily. Found in eukaryotes, Rab39	99.67
cd04149		168	Arf6 Arf6 subfamily. Arf6 (ADP ribosylation factor	99.67
cd04138		162	H_N_K_Ras_like H-Ras/N-Ras/K-Ras subfamily. H-Ras,	99.67
cd04112		191	Rab26 Rab26 subfamily. First identified in rat pan	99.67
cd04140		165	ARHI_like ARHI subfamily. ARHI (A Ras homolog memb	99.67
PLN03110		216	Rab GTPase; Provisional	99.67
PTZ00369		189	Ras-like protein; Provisional	99.67
cd01860		163	Rab5_related Rab5-related subfamily. This subfamil	99.66
smart00173		164	RAS Ras subfamily of RAS small GTPases. Similar in	99.66
cd04101		164	RabL4 RabL4 (Rab-like4) subfamily. RabL4s are nove	99.66
cd04135		174	Tc10 TC10 subfamily. TC10 is a Rho family protein	99.66
cd04130		173	Wrch_1 Wrch-1 subfamily. Wrch-1 (Wnt-1 responsive	99.66
cd01861		161	Rab6 Rab6 subfamily. Rab6 is involved in microtubu	99.66
cd04116		170	Rab9 Rab9 subfamily. Rab9 is found in late endosom	99.65
cd01870		175	RhoA_like RhoA-like subfamily. The RhoA subfamily	99.65
KOG0394		210	consensus Ras-related GTPase [General function pre	99.65
PLN03118		211	Rab family protein; Provisional	99.65
cd01893		166	Miro1 Miro1 subfamily. Miro (mitochondrial Rho) pr	99.65
KOG0091		213	consensus GTPase Rab39, small G protein superfamil	99.65
smart00177		175	ARF ARF-like small GTPases; ARF, ADP-ribosylation	99.64
cd04145		164	M_R_Ras_like M-Ras/R-Ras-like subfamily. This subf	99.64
cd04176		163	Rap2 Rap2 subgroup. The Rap2 subgroup is part of t	99.64
smart00176		200	RAN Ran (Ras-related nuclear proteins) /TC4 subfam	99.64
cd04150		159	Arf1_5_like Arf1-Arf5-like subfamily. This subfami	99.64
smart00175		164	RAB Rab subfamily of small GTPases. Rab GTPases ar	99.63
cd04129		187	Rho2 Rho2 subfamily. Rho2 is a fungal GTPase that	99.63
cd01892		169	Miro2 Miro2 subfamily. Miro (mitochondrial Rho) pr	99.63
cd04154		173	Arl2 Arl2 subfamily. Arl2 (Arf-like 2) GTPases are	99.63
cd04123		162	Rab21 Rab21 subfamily. The localization and functi	99.63
KOG0083		192	consensus GTPase Rab26/Rab37, small G protein supe	99.63
cd01873		195	RhoBTB RhoBTB subfamily. Members of the RhoBTB sub	99.63
cd04115		170	Rab33B_Rab33A Rab33B/Rab33A subfamily. Rab33B is u	99.63
cd04143		247	Rhes_like Rhes_like subfamily. This subfamily incl	99.63
cd00157		171	Rho Rho (Ras homology) family. Members of the Rho	99.63
PLN03108		210	Rab family protein; Provisional	99.62
cd01862		172	Rab7 Rab7 subfamily. Rab7 is a small Rab GTPase th	99.62
PTZ00133		182	ADP-ribosylation factor; Provisional	99.61
cd04114		169	Rab30 Rab30 subfamily. Rab30 appears to be associa	99.61
PLN00223		181	ADP-ribosylation factor; Provisional	99.61
COG5238		388	RNA1 Ran GTPase-activating protein (RanGAP) involv	99.61
cd04158		169	ARD1 ARD1 subfamily. ARD1 (ADP-ribosylation factor	99.61
cd04177		168	RSR1 RSR1 subgroup. RSR1/Bud1p is a member of the	99.6
cd04142		198	RRP22 RRP22 subfamily. RRP22 (Ras-related protein	99.6
cd04151		158	Arl1 Arl1 subfamily. Arl1 (Arf-like 1) localizes t	99.59
KOG0393		198	consensus Ras-related small GTPase, Rho type [Gene	99.59
cd01863		161	Rab18 Rab18 subfamily. Mammalian Rab18 is implicat	99.59
cd04162		164	Arl9_Arfrp2_like Arl9/Arfrp2-like subfamily. Arl9	99.58
cd00154		159	Rab Rab family. Rab GTPases form the largest famil	99.58
PLN00023		334	GTP-binding protein; Provisional	99.57
cd04157		162	Arl6 Arl6 subfamily. Arl6 (Arf-like 6) forms a sub	99.57
cd00876		160	Ras Ras family. The Ras family of the Ras superfam	99.57
cd04152		183	Arl4_Arl7 Arl4/Arl7 subfamily. Arl4 (Arf-like 4) i	99.57
cd04103		158	Centaurin_gamma Centaurin gamma. The centaurins (a	99.57
KOG0472		565	consensus Leucine-rich repeat protein [Function un	99.57
cd00878		158	Arf_Arl Arf (ADP-ribosylation factor)/Arl (Arf-lik	99.57
cd04139		164	RalA_RalB RalA/RalB subfamily. The Ral (Ras-like)	99.55
KOG0097		215	consensus GTPase Rab14, small G protein superfamil	99.54
cd04161		167	Arl2l1_Arl13_like Arl2l1/Arl13 subfamily. Arl2l1 (	99.54
cd04146		165	RERG_RasL11_like RERG/RasL11-like subfamily. RERG	99.53
PF08477		119	Miro: Miro-like protein; InterPro: IPR013684 Mitoc	99.53
cd04160		167	Arfrp1 Arfrp1 subfamily. Arfrp1 (Arf-related prote	99.53
cd04153		174	Arl5_Arl8 Arl5/Arl8 subfamily. Arl5 (Arf-like 5) a	99.53
KOG0618		1081	consensus Serine/threonine phosphatase 2C containi	99.53
cd04147		198	Ras_dva Ras-dva subfamily. Ras-dva (Ras - dorsal-v	99.52
cd04156		160	ARLTS1 ARLTS1 subfamily. ARLTS1 (Arf-like tumor su	99.52
COG5238		388	RNA1 Ran GTPase-activating protein (RanGAP) involv	99.52
cd04148		221	RGK RGK subfamily. The RGK (Rem, Rem2, Rad, Gem/Ki	99.51
cd04159		159	Arl10_like Arl10-like subfamily. Arl9/Arl10 was id	99.5
PTZ00132		215	GTP-binding nuclear protein Ran; Provisional	99.5
smart00178		184	SAR Sar1p-like members of the Ras-family of small	99.49
cd04137		180	RheB Rheb (Ras Homolog Enriched in Brain) subfamil	99.49
KOG0395		196	consensus Ras-related GTPase [General function pre	99.48
cd00879		190	Sar1 Sar1 subfamily. Sar1 is an essential componen	99.46
PF00025		175	Arf: ADP-ribosylation factor family The prints ent	99.45
cd04155		173	Arl3 Arl3 subfamily. Arl3 (Arf-like 3) is an Arf f	99.45
KOG4252		246	consensus GTP-binding protein [Signal transduction	99.45
KOG0618		1081	consensus Serine/threonine phosphatase 2C containi	99.41
COG1100		219	GTPase SAR1 and related small G proteins [General	99.41
KOG0075		186	consensus GTP-binding ADP-ribosylation factor-like	99.41
cd01890		179	LepA LepA subfamily. LepA belongs to the GTPase fa	99.41
cd04171		164	SelB SelB subfamily. SelB is an elongation factor	99.39
TIGR00231		161	small_GTP small GTP-binding protein domain. This m	99.38
cd01887		168	IF2_eIF5B IF2/eIF5B (initiation factors 2/ eukaryo	99.34
KOG0073		185	consensus GTP-binding ADP-ribosylation factor-like	99.34
cd01897		168	NOG NOG1 is a nucleolar GTP-binding protein presen	99.34
KOG0070		181	consensus GTP-binding ADP-ribosylation factor Arf1	99.33
PTZ00099		176	rab6; Provisional	99.32
PRK15387		788	E3 ubiquitin-protein ligase SspH2; Provisional	99.31
PRK15387		788	E3 ubiquitin-protein ligase SspH2; Provisional	99.29
cd01891		194	TypA_BipA TypA (tyrosine phosphorylated protein A)	99.27
TIGR02528		142	EutP ethanolamine utilization protein, EutP. This	99.27
KOG0071		180	consensus GTP-binding ADP-ribosylation factor Arf6	99.27
KOG0472		565	consensus Leucine-rich repeat protein [Function un	99.26
cd01898		170	Obg Obg subfamily. The Obg nucleotide binding prot	99.26
KOG1673		205	consensus Ras GTPases [General function prediction	99.24
PRK03003		472	GTP-binding protein Der; Reviewed	99.23
PRK00454		196	engB GTP-binding protein YsxC; Reviewed	99.22
KOG4341		483	consensus F-box protein containing LRR [General fu	99.22
PRK15494		339	era GTPase Era; Provisional	99.21
cd01879		158	FeoB Ferrous iron transport protein B (FeoB) subfa	99.19
PLN03210		1153	Resistant to P. syringae 6; Provisional	99.19
PRK04213		201	GTP-binding protein; Provisional	99.18
cd01889		192	SelB_euk SelB subfamily. SelB is an elongation fac	99.18
PRK15370		754	E3 ubiquitin-protein ligase SlrP; Provisional	99.17
cd01878		204	HflX HflX subfamily. A distinct conserved domain w	99.16
cd00882		157	Ras_like_GTPase Ras-like GTPase superfamily. The R	99.16
TIGR03594		429	GTPase_EngA ribosome-associated GTPase EngA. EngA	99.15
cd00881		189	GTP_translation_factor GTP translation factor fami	99.15
PRK15370		754	E3 ubiquitin-protein ligase SlrP; Provisional	99.14
COG1160		444	Predicted GTPases [General function prediction onl	99.14
cd01894		157	EngA1 EngA1 subfamily. This CD represents the firs	99.13
TIGR03598		179	GTPase_YsxC ribosome biogenesis GTP-binding protei	99.12
TIGR03156		351	GTP_HflX GTP-binding protein HflX. This protein fa	99.1
PRK03003		472	GTP-binding protein Der; Reviewed	99.1
cd01888		203	eIF2_gamma eIF2-gamma (gamma subunit of initiation	99.09
TIGR01393		595	lepA GTP-binding protein LepA. LepA (GUF1 in Sacca	99.09
cd01876		170	YihA_EngB The YihA (EngB) subfamily. This subfamil	99.07
KOG4341		483	consensus F-box protein containing LRR [General fu	99.07
TIGR00436		270	era GTP-binding protein Era. Era is an essential G	99.06
cd04164		157	trmE TrmE (MnmE, ThdF, MSS1) is a 3-domain protein	99.05
PRK05291		449	trmE tRNA modification GTPase TrmE; Reviewed	99.05
TIGR00487		587	IF-2 translation initiation factor IF-2. This mode	99.05
cd01895		174	EngA2 EngA2 subfamily. This CD represents the seco	99.04
KOG2120		419	consensus SCF ubiquitin ligase, Skp2 component [Po	99.04
PRK15467		158	ethanolamine utilization protein EutP; Provisional	99.04
PRK12299		335	obgE GTPase CgtA; Reviewed	99.04
cd01881		176	Obg_like The Obg-like subfamily consists of five w	99.04
TIGR00450		442	mnmE_trmE_thdF tRNA modification GTPase TrmE. TrmE	99.04
cd04105		203	SR_beta Signal recognition particle receptor, beta	99.03
TIGR02729		329	Obg_CgtA Obg family GTPase CgtA. This model descri	99.03
cd04166		208	CysN_ATPS CysN_ATPS subfamily. CysN, together with	99.03
PRK00093		435	GTP-binding protein Der; Reviewed	99.03
cd04163		168	Era Era subfamily. Era (E. coli Ras-like protein)	99.02
KOG3883		198	consensus Ras family small GTPase [Signal transduc	99.01
PRK09518		712	bifunctional cytidylate kinase/GTPase Der; Reviewe	99.01
PRK00093		435	GTP-binding protein Der; Reviewed	99.0
PLN03210		1153	Resistant to P. syringae 6; Provisional	99.0
CHL00189		742	infB translation initiation factor 2; Provisional	99.0
KOG0074		185	consensus GTP-binding ADP-ribosylation factor-like	98.99
cd04104		197	p47_IIGP_like p47 (47-kDa) family. The p47 GTPase	98.99
PF00009		188	GTP_EFTU: Elongation factor Tu GTP binding domain;	98.96
KOG0072		182	consensus GTP-binding ADP-ribosylation factor-like	98.96
PRK05306		787	infB translation initiation factor IF-2; Validated	98.96
KOG3207		505	consensus Beta-tubulin folding cofactor E [Posttra	98.96
PRK12296		500	obgE GTPase CgtA; Reviewed	98.95
TIGR00483		426	EF-1_alpha translation elongation factor EF-1 alph	98.94
PRK11058		426	GTPase HflX; Provisional	98.94
PRK12297		424	obgE GTPase CgtA; Reviewed	98.94
TIGR00475		581	selB selenocysteine-specific elongation factor Sel	98.93
TIGR03594		429	GTPase_EngA ribosome-associated GTPase EngA. EngA	98.93
cd00880		163	Era_like Era (E. coli Ras-like protein)-like. This	98.92
PRK00089		292	era GTPase Era; Reviewed	98.91
PRK05433		600	GTP-binding protein LepA; Provisional	98.91
cd04167		213	Snu114p Snu114p subfamily. Snu114p is one of sever	98.9
TIGR00491		590	aIF-2 translation initiation factor aIF-2/yIF-2. T	98.9
PRK12317		425	elongation factor 1-alpha; Reviewed	98.89
KOG2120		419	consensus SCF ubiquitin ligase, Skp2 component [Po	98.89
PRK09518		712	bifunctional cytidylate kinase/GTPase Der; Reviewe	98.87
cd04165		224	GTPBP1_like GTPBP1-like. Mammalian GTP binding pro	98.86
KOG0096		216	consensus GTPase Ran/TC4/GSP1 (nuclear protein tra	98.86
COG0218		200	Predicted GTPase [General function prediction only	98.85
PF02421		156	FeoB_N: Ferrous iron transport protein B; InterPro	98.85
TIGR00437		591	feoB ferrous iron transporter FeoB. FeoB (773 amin	98.84
PF04670		232	Gtr1_RagA: Gtr1/RagA G protein conserved region; I	98.83
PF10662		143	PduV-EutP: Ethanolamine utilisation - propanediol	98.83
KOG0076		197	consensus GTP-binding ADP-ribosylation factor-like	98.82
PRK09554		772	feoB ferrous iron transport protein B; Reviewed	98.82
TIGR03680		406	eif2g_arch translation initiation factor 2 subunit	98.8
PRK10218		607	GTP-binding protein; Provisional	98.78
PRK04000		411	translation initiation factor IF-2 subunit gamma;	98.78
PRK10512		614	selenocysteinyl-tRNA-specific translation factor;	98.78
PRK12298		390	obgE GTPase CgtA; Reviewed	98.78
KOG3207		505	consensus Beta-tubulin folding cofactor E [Posttra	98.77
cd01896		233	DRG The developmentally regulated GTP-binding prot	98.74
KOG1707		625	consensus Predicted Ras related/Rac-GTP binding pr	98.74
cd01883		219	EF1_alpha Eukaryotic elongation factor 1 (EF1) alp	98.73
cd04168		237	TetM_like Tet(M)-like subfamily. Tet(M), Tet(O), T	98.72
KOG4423		229	consensus GTP-binding protein-like, RAS superfamil	98.72
COG2229		187	Predicted GTPase [General function prediction only	98.71
PRK04004		586	translation initiation factor IF-2; Validated	98.7
TIGR01394		594	TypA_BipA GTP-binding protein TypA/BipA. This bact	98.7
cd01884		195	EF_Tu EF-Tu subfamily. This subfamily includes ort	98.67
KOG4242		553	consensus Predicted myosin-I-binding protein [Cell	98.67
TIGR02034		406	CysN sulfate adenylyltransferase, large subunit. H	98.67
COG0486		454	ThdF Predicted GTPase [General function prediction	98.65
cd01885		222	EF2 EF2 (for archaea and eukarya). Translocation r	98.64
PRK05124		474	cysN sulfate adenylyltransferase subunit 1; Provis	98.59
KOG4237		498	consensus Extracellular matrix protein slit, conta	98.57
cd04169		267	RF3 RF3 subfamily. Peptide chain release factor 3	98.56
TIGR00485		394	EF-Tu translation elongation factor TU. This align	98.56
COG1159		298	Era GTPase [General function prediction only]	98.56
KOG0617		264	consensus Ras suppressor protein (contains leucine	98.52
COG1160		444	Predicted GTPases [General function prediction onl	98.51
PLN00043		447	elongation factor 1-alpha; Provisional	98.47
PRK12735		396	elongation factor Tu; Reviewed	98.47
cd01886		270	EF-G Elongation factor G (EF-G) subfamily. Translo	98.46
KOG1423		379	consensus Ras-like GTPase ERA [Cell cycle control,	98.43
KOG0617		264	consensus Ras suppressor protein (contains leucine	98.43
PRK05506		632	bifunctional sulfate adenylyltransferase subunit 1	98.43
COG1084		346	Predicted GTPase [General function prediction only	98.42
PRK12736		394	elongation factor Tu; Reviewed	98.42
PRK13351		687	elongation factor G; Reviewed	98.42
cd04170		268	EF-G_bact Elongation factor G (EF-G) subfamily. Tr	98.41
PRK13768		253	GTPase; Provisional	98.41
cd01850		276	CDC_Septin CDC/Septin. Septins are a conserved fam	98.4
cd01899		318	Ygr210 Ygr210 subfamily. Ygr210 is a member of Obg	98.39
KOG4237		498	consensus Extracellular matrix protein slit, conta	98.36
TIGR00503		527	prfC peptide chain release factor 3. This translat	98.34
KOG1259		490	consensus Nischarin, modulator of integrin alpha5	98.33
cd01852		196	AIG1 AIG1 (avrRpt2-induced gene 1). This represent	98.33
PF03029		238	ATP_bind_1: Conserved hypothetical ATP binding pro	98.33
PLN03126		478	Elongation factor Tu; Provisional	98.3
CHL00071		409	tufA elongation factor Tu	98.29
PRK00741		526	prfC peptide chain release factor 3; Provisional	98.28
PF14580		175	LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ	98.27
KOG1259		490	consensus Nischarin, modulator of integrin alpha5	98.26
PRK00049		396	elongation factor Tu; Reviewed	98.23
TIGR00484		689	EF-G translation elongation factor EF-G. After pep	98.2
PF05783		472	DLIC: Dynein light intermediate chain (DLIC); Inte	98.19
cd01853		249	Toc34_like Toc34-like (Translocon at the Outer-env	98.17
PTZ00327		460	eukaryotic translation initiation factor 2 gamma s	98.12
PTZ00141		446	elongation factor 1- alpha; Provisional	98.09
PRK14845		1049	translation initiation factor IF-2; Provisional	98.08
TIGR00991		313	3a0901s02IAP34 GTP-binding protein (Chloroplast En	98.07
PF09439		181	SRPRB: Signal recognition particle receptor beta s	98.06
COG3596		296	Predicted GTPase [General function prediction only	98.06
KOG1489		366	consensus Predicted GTP-binding protein (ODN super	98.04
KOG0077		193	consensus Vesicle coat complex COPII, GTPase subun	98.03
KOG1191		531	consensus Mitochondrial GTPase [Translation, ribos	98.03
PRK09602		396	translation-associated GTPase; Reviewed	98.03
KOG3886		295	consensus GTP-binding protein [Signal transduction	98.02
KOG1532		366	consensus GTPase XAB1, interacts with DNA repair p	98.01
COG0370		653	FeoB Fe2+ transport system protein B [Inorganic io	98.01
KOG0462		650	consensus Elongation factor-type GTP-binding prote	98.01
PRK12740		668	elongation factor G; Reviewed	98.01
PF01926		116	MMR_HSR1: 50S ribosome-binding GTPase; InterPro: I	98.01
COG5256		428	TEF1 Translation elongation factor EF-1alpha (GTPa	98.0
COG4917		148	EutP Ethanolamine utilization protein [Amino acid	98.0
PLN03127		447	Elongation factor Tu; Provisional	98.0
PF14580		175	LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ	97.99
PF04548		212	AIG1: AIG1 family; InterPro: IPR006703 This entry	97.98
KOG3905		473	consensus Dynein light intermediate chain [Cell mo	97.97
cd01882		225	BMS1 Bms1. Bms1 is an essential, evolutionarily co	97.96
COG2262		411	HflX GTPases [General function prediction only]	97.96
KOG2982		418	consensus Uncharacterized conserved protein [Funct	97.95
KOG0532		722	consensus Leucine-rich repeat (LRR) protein, conta	97.9
PRK09866		741	hypothetical protein; Provisional	97.89
PF05049		376	IIGP: Interferon-inducible GTPase (IIGP); InterPro	97.87
KOG1947		482	consensus Leucine rich repeat proteins, some prote	97.85
PRK12739		691	elongation factor G; Reviewed	97.83
KOG1947		482	consensus Leucine rich repeat proteins, some prote	97.8
COG4886		394	Leucine-rich repeat (LRR) protein [Function unknow	97.78
COG4886		394	Leucine-rich repeat (LRR) protein [Function unknow	97.77
KOG2982		418	consensus Uncharacterized conserved protein [Funct	97.75
cd00066		317	G-alpha G protein alpha subunit. The alpha subunit	97.7
TIGR00073		207	hypB hydrogenase accessory protein HypB. HypB is i	97.67
TIGR00490		720	aEF-2 translation elongation factor aEF-2. This mo	97.67
PRK00007		693	elongation factor G; Reviewed	97.66
TIGR02836		492	spore_IV_A stage IV sporulation protein A. A compa	97.63
KOG0531		414	consensus Protein phosphatase 1, regulatory subuni	97.6
KOG1859		1096	consensus Leucine-rich repeat proteins [General fu	97.57
PRK09435		332	membrane ATPase/protein kinase; Provisional	97.56
KOG1859		1096	consensus Leucine-rich repeat proteins [General fu	97.56
KOG0532		722	consensus Leucine-rich repeat (LRR) protein, conta	97.56
KOG4242		553	consensus Predicted myosin-I-binding protein [Cell	97.54
COG0532		509	InfB Translation initiation factor 2 (IF-2; GTPase	97.53
KOG0090		238	consensus Signal recognition particle receptor, be	97.52
COG5192		1077	BMS1 GTP-binding protein required for 40S ribosome	97.47
smart00275		342	G_alpha G protein alpha subunit. Subunit of G prot	97.47
COG0481		603	LepA Membrane GTPase LepA [Cell envelope biogenesi	97.46
COG0536		369	Obg Predicted GTPase [General function prediction	97.44
smart00010		124	small_GTPase Small GTPase of the Ras superfamily;	97.42
PRK10463		290	hydrogenase nickel incorporation protein HypB; Pro	97.41
KOG1145		683	consensus Mitochondrial translation initiation fac	97.39
KOG0461		522	consensus Selenocysteine-specific elongation facto	97.38
TIGR00101		199	ureG urease accessory protein UreG. This model rep	97.35
COG2895		431	CysN GTPases - Sulfate adenylate transferase subun	97.32
KOG0463		641	consensus GTP-binding protein GP-1 [General functi	97.28
TIGR00993		763	3a0901s04IAP86 chloroplast protein import componen	97.28
KOG0531		414	consensus Protein phosphatase 1, regulatory subuni	97.27
KOG3665		699	consensus ZYG-1-like serine/threonine protein kina	97.25
COG5257		415	GCD11 Translation initiation factor 2, gamma subun	97.2
KOG3665		699	consensus ZYG-1-like serine/threonine protein kina	97.2
PTZ00416		836	elongation factor 2; Provisional	97.18
TIGR00750		300	lao LAO/AO transport system ATPase. Mutations have	97.18
PLN00116		843	translation elongation factor EF-2 subunit; Provis	97.16
KOG0458		603	consensus Elongation factor 1 alpha [Translation,	97.09
TIGR00157		245	ribosome small subunit-dependent GTPase A. The Aqu	97.0
PRK07560		731	elongation factor EF-2; Reviewed	96.92
smart00053		240	DYNc Dynamin, GTPase. Large GTPases that mediate v	96.89
COG0378		202	HypB Ni2+-binding GTPase involved in regulation of	96.89
PF00350		168	Dynamin_N: Dynamin family; InterPro: IPR001401 Mem	96.86
COG1217		603	TypA Predicted membrane GTPase involved in stress	96.8
KOG4579		177	consensus Leucine-rich repeat (LRR) protein associ	96.74
KOG1143		591	consensus Predicted translation elongation factor	96.71
KOG0448		749	consensus Mitofusin 1 GTPase, involved in mitochon	96.69
COG3276		447	SelB Selenocysteine-specific translation elongatio	96.65
PLN03150		623	hypothetical protein; Provisional	96.64
KOG1490		620	consensus GTP-binding protein CRFG/NOG1 (ODN super	96.6
KOG3735		353	consensus Tropomodulin and leiomodulin [Cytoskelet	96.58
PLN03150		623	hypothetical protein; Provisional	96.52
KOG1547		336	consensus Septin CDC10 and related P-loop GTPases	96.51
PF00735		281	Septin: Septin; InterPro: IPR000038 Septins consti	96.43
COG1163		365	DRG Predicted GTPase [General function prediction	96.41
KOG4579		177	consensus Leucine-rich repeat (LRR) protein associ	96.39
KOG3735		353	consensus Tropomodulin and leiomodulin [Cytoskelet	96.38
KOG0082		354	consensus G-protein alpha subunit (small G protein	96.33
PF13855		61	LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF	96.31
cd01857		141	HSR1_MMR1 HSR1/MMR1. Human HSR1, is localized to t	96.24
KOG1144		1064	consensus Translation initiation factor 5B (eIF-5B	96.17
PF12799		44	LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_	96.14
PF03308		266	ArgK: ArgK protein; InterPro: IPR005129 Bacterial	96.03
cd01859		156	MJ1464 MJ1464. This family represents archaeal GTP	95.96
COG0050		394	TufB GTPases - translation elongation factors [Tra	95.95
cd01855		190	YqeH YqeH. YqeH is an essential GTP-binding protei	95.94
PF13855		61	LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF	95.88
KOG2123		388	consensus Uncharacterized conserved protein [Funct	95.85
TIGR03597		360	GTPase_YqeH ribosome biogenesis GTPase YqeH. This	95.82
KOG2123		388	consensus Uncharacterized conserved protein [Funct	95.72
PF12799		44	LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_	95.64
KOG4658		889	consensus Apoptotic ATPase [Signal transduction me	95.62
KOG1707		625	consensus Predicted Ras related/Rac-GTP binding pr	95.56
COG1703		323	ArgK Putative periplasmic protein kinase ArgK and	95.46
KOG3887		347	consensus Predicted small GTPase involved in nucle	95.45
KOG1954		532	consensus Endocytosis/signaling protein EHD1 [Sign	95.38
KOG0468		971	consensus U5 snRNP-specific protein [Translation,	95.29
smart00368		28	LRR_RI Leucine rich repeat, ribonuclease inhibitor	95.19
cd04178		172	Nucleostemin_like Nucleostemin-like. Nucleostemin	95.19
cd01858		157	NGP_1 NGP-1. Autoantigen NGP-1 (Nucleolar G-protei	95.13
PF00503		389	G-alpha: G-protein alpha subunit; InterPro: IPR001	95.05
cd01856		171	YlqF YlqF. Proteins of the YlqF family contain all	94.99
smart00368		28	LRR_RI Leucine rich repeat, ribonuclease inhibitor	94.8
cd01900		274	YchF YchF subfamily. YchF is a member of the Obg f	94.65
COG0480		697	FusA Translation elongation factors (GTPases) [Tra	94.55
PRK09563		287	rbgA GTPase YlqF; Reviewed	94.55
TIGR03596		276	GTPase_YlqF ribosome biogenesis GTP-binding protei	94.46
KOG2486		320	consensus Predicted GTPase [General function predi	94.31
KOG4658		889	consensus Apoptotic ATPase [Signal transduction me	94.22
KOG1644		233	consensus U2-associated snRNP A' protein [RNA proc	94.12
cd01855		190	YqeH YqeH. YqeH is an essential GTP-binding protei	94.03
COG5258		527	GTPBP1 GTPase [General function prediction only]	93.94
PRK13695		174	putative NTPase; Provisional	93.89
PRK00098		298	GTPase RsgA; Reviewed	93.78
COG1161		322	Predicted GTPases [General function prediction onl	93.7
PRK09601		364	GTP-binding protein YchF; Reviewed	93.65
TIGR03348		1169	VI_IcmF type VI secretion protein IcmF. Members of	93.3
PTZ00258		390	GTP-binding protein; Provisional	93.25
cd01851		224	GBP Guanylate-binding protein (GBP), N-terminal do	93.24
cd01859		156	MJ1464 MJ1464. This family represents archaeal GTP	93.01
PF09547		492	Spore_IV_A: Stage IV sporulation protein A (spore_	92.94
cd01858		157	NGP_1 NGP-1. Autoantigen NGP-1 (Nucleolar G-protei	92.88
PF13516		24	LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RI	92.81
COG5019		373	CDC3 Septin family protein [Cell division and chro	92.75
PRK15386		426	type III secretion protein GogB; Provisional	92.74
PRK13796		365	GTPase YqeH; Provisional	92.72
PRK12289		352	GTPase RsgA; Reviewed	92.64
KOG0410		410	consensus Predicted GTP binding protein [General f	92.6
KOG3864		221	consensus Uncharacterized conserved protein [Funct	92.58
KOG2655		366	consensus Septin family protein (P-loop GTPase) [C	92.4
PF13516		24	LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RI	92.1
cd01854		287	YjeQ_engC YjeQ/EngC. YjeQ (YloQ in Bacillus subtil	92.02
PRK15386		426	type III secretion protein GogB; Provisional	92.01
cd01849		155	YlqF_related_GTPase YlqF-related GTPases. These pr	91.89
TIGR00157		245	ribosome small subunit-dependent GTPase A. The Aqu	91.68
KOG3929		363	consensus Uncharacterized conserved protein [Funct	91.68
cd01849		155	YlqF_related_GTPase YlqF-related GTPases. These pr	91.6
KOG0460		449	consensus Mitochondrial translation elongation fac	91.58
PRK12288		347	GTPase RsgA; Reviewed	91.49
KOG3864		221	consensus Uncharacterized conserved protein [Funct	91.46
PRK12289		352	GTPase RsgA; Reviewed	91.34
KOG0705		749	consensus GTPase-activating protein Centaurin gamm	91.27
KOG0085		359	consensus G protein subunit Galphaq/Galphay, small	90.84
COG4108		528	PrfC Peptide chain release factor RF-3 [Translatio	90.54
cd03114		148	ArgK-like The function of this protein family is u	90.29
PRK13796		365	GTPase YqeH; Provisional	90.08
KOG1534		273	consensus Putative transcription factor FET5 [Tran	89.95
KOG1644		233	consensus U2-associated snRNP A' protein [RNA proc	89.92
KOG1486		364	consensus GTP-binding protein DRG2 (ODN superfamil	89.73
TIGR03597		360	GTPase_YqeH ribosome biogenesis GTPase YqeH. This	89.51
cd01854		287	YjeQ_engC YjeQ/EngC. YjeQ (YloQ in Bacillus subtil	89.21
COG1618		179	Predicted nucleotide kinase [Nucleotide transport	89.13
PF13207		121	AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6	88.65
PRK12288		347	GTPase RsgA; Reviewed	88.62
PRK00098		298	GTPase RsgA; Reviewed	88.58
KOG3859		406	consensus Septins (P-loop GTPases) [Cell cycle con	88.29
PRK14722		374	flhF flagellar biosynthesis regulator FlhF; Provis	88.25
PRK10416		318	signal recognition particle-docking protein FtsY;	88.2
PRK14737		186	gmk guanylate kinase; Provisional	88.06
PF03193		161	DUF258: Protein of unknown function, DUF258; Inter	88.02
cd01857		141	HSR1_MMR1 HSR1/MMR1. Human HSR1, is localized to t	87.95
cd03112		158	CobW_like The function of this protein family is u	87.64
PRK08118		167	topology modulation protein; Reviewed	87.58
PF02492		178	cobW: CobW/HypB/UreG, nucleotide-binding domain; I	87.36
TIGR00064		272	ftsY signal recognition particle-docking protein F	86.75
PRK14974		336	cell division protein FtsY; Provisional	86.73
COG0563		178	Adk Adenylate kinase and related kinases [Nucleoti	86.66
PRK07261		171	topology modulation protein; Provisional	86.38
cd03222		177	ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibi	86.15
cd03115		173	SRP The signal recognition particle (SRP) mediates	86.0
KOG0099		379	consensus G protein subunit Galphas, small G prote	85.98
TIGR01425		429	SRP54_euk signal recognition particle protein SRP5	85.45
PF03266		168	NTPase_1: NTPase; InterPro: IPR004948 This entry r	85.35
COG4152		300	ABC-type uncharacterized transport system, ATPase	85.34
KOG2739		260	consensus Leucine-rich acidic nuclear protein [Cel	85.31
PF13671		143	AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1	85.26
KOG0467		887	consensus Translation elongation factor 2/ribosome	85.24
cd03116		159	MobB Molybdenum is an essential trace element in t	85.09
cd01856		171	YlqF YlqF. Proteins of the YlqF family contain all	84.82
KOG0780		483	consensus Signal recognition particle, subunit Srp	84.22
PF03215		519	Rad17: Rad17 cell cycle checkpoint protein	83.82
KOG0447		980	consensus Dynamin-like GTP binding protein [Genera	83.76
TIGR00092		368	GTP-binding protein YchF. This predicted GTP-bindi	83.65
KOG1533		290	consensus Predicted GTPase [General function predi	83.62
smart00072		184	GuKc Guanylate kinase homologues. Active enzymes c	83.61
cd00071		137	GMPK Guanosine monophosphate kinase (GMPK, EC 2.7.	83.56
PRK10867		433	signal recognition particle protein; Provisional	83.28
KOG4273		418	consensus Uncharacterized conserved protein [Funct	83.22
cd02019		69	NK Nucleoside/nucleotide kinase (NK) is a protein	82.74
COG1126		240	GlnQ ABC-type polar amino acid transport system, A	82.62
COG2884		223	FtsE Predicted ATPase involved in cell division [C	82.62
PF13521		163	AAA_28: AAA domain; PDB: 1LW7_A.	82.55
KOG1491		391	consensus Predicted GTP-binding protein (ODN super	82.49
KOG2739		260	consensus Leucine-rich acidic nuclear protein [Cel	82.05
PF13238		129	AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB	81.99
COG0194		191	Gmk Guanylate kinase [Nucleotide transport and met	81.48
PF13555		62	AAA_29: P-loop containing region of AAA domain	81.29
smart00382		148	AAA ATPases associated with a variety of cellular	81.2
PF00004		132	AAA: ATPase family associated with various cellula	81.17
PRK06217		183	hypothetical protein; Validated	81.06
PRK10751		173	molybdopterin-guanine dinucleotide biosynthesis pr	80.89
PRK00771		437	signal recognition particle protein Srp54; Provisi	80.58
smart00367		26	LRR_CC Leucine-rich repeat - CC (cysteine-containi	80.04

>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily	Back alignment and domain information

Probab=99.93  E-value=7.4e-24  Score=248.55  Aligned_cols=312  Identities=22%  Similarity=0.281  Sum_probs=186.0

Q ss_pred             EEEecCCCCHHHHHHHHHHhhcCCCccEEEEecCCCCHHHHHHHHHHhHcCCCccEEEeecCCCC--HHHHHHHHHHhcc
Q 000665           79 LEFHSVEWEIEQMRILGLLLDCSSNVKQVVFRRNKFDAECLAEISDVVRRNGVIKEVMFTESGIK--NAGASLLASALKV  156 (1363)
Q Consensus        79 L~Ls~~~i~~~~~~~L~~~L~~~~~L~~L~Ls~N~i~~~~~~~l~~~L~~~~~L~~L~Ls~n~I~--~~g~~~L~~~L~~  156 (1363)
                      |+|.++.++++.+..+...+   .+|++|+|+++.+++.+...++..+..++++++|+++.+.++  +.++..++..+..
T Consensus         3 l~L~~~~l~~~~~~~~~~~l---~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~   79 (319)
T cd00116           3 LSLKGELLKTERATELLPKL---LCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTK   79 (319)
T ss_pred             cccccCcccccchHHHHHHH---hhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHh
Confidence            45555555544443222222   235666666666666665566655555555666666666555  4555555555555


Q ss_pred             CCCccEEEccCCCCChhhHHHHHHHHhcCCCeeEEEccCCCCCChHHHHHHHHHhCCCceEEEccCCCCcchhHHHhhcC
Q 000665          157 NDTLEELQIWEDSIGSKGAEELSKMIEANSTLKSLTIFDSSSLTATPLISAVLARNRAMEVHVWSGENGEKSSKVVEFLP  236 (1363)
Q Consensus       157 ~~sL~~L~Ls~N~i~~~g~~~L~~~L~~~~~L~~L~Ls~n~~~~~~~~l~~~l~~~~~L~~L~Ls~n~~~~~~~l~~~L~  236 (1363)
                      +++|+.|+|++|.+.......+...... ++|+.|++++|.                                       
T Consensus        80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~-~~L~~L~ls~~~---------------------------------------  119 (319)
T cd00116          80 GCGLQELDLSDNALGPDGCGVLESLLRS-SSLQELKLNNNG---------------------------------------  119 (319)
T ss_pred             cCceeEEEccCCCCChhHHHHHHHHhcc-CcccEEEeeCCc---------------------------------------
Confidence            5556666666666554444444333333 445555555554                                       


Q ss_pred             CCCcceeeccCchhHHHHHHHhcCC-CcccEEEccCCCCChHHHHHHHHHHhhCCCccEEEccCCCCChHHHHHHHHHHh
Q 000665          237 ENGTLRIYRLDVSGSCRVACSLGCN-TTVKSLDMTGVRLKSRWAKEFRWVLQQNQSLKEVILSKTCLKDKGVVYVAAGLF  315 (1363)
Q Consensus       237 ~~~~L~~L~Ls~~g~~~L~~~L~~~-~~L~~LdLs~N~L~~~~~~~L~~~L~~n~~L~~LdLs~N~L~d~g~~~L~~~L~  315 (1363)
                               +++.+...+...+..+ ++|+.|+|++|.++..+...+...+..+++|++|+|++|.+++.+...++..+.
T Consensus       120 ---------~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~  190 (319)
T cd00116         120 ---------LGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLK  190 (319)
T ss_pred             ---------cchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHH
Confidence                     3334444455555555 666666666666666555556666666666666666666666666666666666


Q ss_pred             cCCCCCEEEccCCCCCHhhHHHHHhhhhhcccccccCCCceeEEEeeCCCCCCCHHHHHHHHHccc-cCcceEEEEecCC
Q 000665          316 KNRSLESLYLHGNWFSGVGVEHLLCPLSRFSSLQSQANITLRSVTFGGGRTKIGRDGIAAILQMLT-TNETVTQLGIYDD  394 (1363)
Q Consensus       316 ~~~~L~~LdLs~N~l~~~g~~~L~~~L~~~~~L~~~~~~~L~~L~Lsg~~N~i~~~g~~~L~~~L~-~~~~L~~L~Ls~N  394 (1363)
                      .+++|++|+|++|.+++.++..+...+        ..+++|+.|+++  +|.+++.+...++..+. .+++|++|++++|
T Consensus       191 ~~~~L~~L~L~~n~i~~~~~~~l~~~~--------~~~~~L~~L~ls--~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n  260 (319)
T cd00116         191 ANCNLEVLDLNNNGLTDEGASALAETL--------ASLKSLEVLNLG--DNNLTDAGAAALASALLSPNISLLTLSLSCN  260 (319)
T ss_pred             hCCCCCEEeccCCccChHHHHHHHHHh--------cccCCCCEEecC--CCcCchHHHHHHHHHHhccCCCceEEEccCC
Confidence            666666666666666666666655544        345666666666  45666666655555442 2456777777776


Q ss_pred             CCCCHHHHHHHHHHHhhCCCccEEEeecCCCCCChhHHHHHHHHHhcC-CCccEEeccCCCC
Q 000665          395 QSLRPDDFVRIFKSLQKNASLRQLSLQGCKGVRGELVQQAIMETLQVN-PWIEDIDLERTPL  455 (1363)
Q Consensus       395 ~~i~~~gl~~L~~~L~~~~~L~~L~Ls~N~~~i~~~~~~~L~~~L~~n-~~L~~LdL~~N~l  455 (1363)
                       .+++.+...++..+..+++|+.|++++|.  +++.+...++..+..+ +.|+.|++.+|++
T Consensus       261 -~i~~~~~~~l~~~~~~~~~L~~l~l~~N~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (319)
T cd00116         261 -DITDDGAKDLAEVLAEKESLLELDLRGNK--FGEEGAQLLAESLLEPGNELESLWVKDDSF  319 (319)
T ss_pred             -CCCcHHHHHHHHHHhcCCCccEEECCCCC--CcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence             57666666666666666777777777775  5666667777777666 6677777777764

>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]	Back alignment and domain information

>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily	Back alignment and domain information

>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]	Back alignment and domain information

>KOG0092 consensus GTPase Rab5/YPT51 and related small G protein superfamily GTPases [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0094 consensus GTPase Rab6/YPT6/Ryh1, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0078 consensus GTP-binding protein SEC4, small G protein superfamily, and related Ras family GTP-binding proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0084 consensus GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>cd04121 Rab40 Rab40 subfamily	Back alignment and domain information

>cd04120 Rab12 Rab12 subfamily	Back alignment and domain information

>cd04172 Rnd3_RhoE_Rho8 Rnd3/RhoE/Rho8 subfamily	Back alignment and domain information

>cd04133 Rop_like Rop subfamily	Back alignment and domain information

>cd04131 Rnd Rnd subfamily	Back alignment and domain information

>cd01874 Cdc42 Cdc42 subfamily	Back alignment and domain information

>KOG0095 consensus GTPase Rab30, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0098 consensus GTPase Rab2, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>cd04174 Rnd1_Rho6 Rnd1/Rho6 subfamily	Back alignment and domain information

>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]	Back alignment and domain information

>KOG0088 consensus GTPase Rab21, small G protein superfamily [General function prediction only]	Back alignment and domain information

>cd01875 RhoG RhoG subfamily	Back alignment and domain information

>cd04128 Spg1 Spg1p	Back alignment and domain information

>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]	Back alignment and domain information

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional	Back alignment and domain information

>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]	Back alignment and domain information

>KOG0080 consensus GTPase Rab18, small G protein superfamily [General function prediction only]	Back alignment and domain information

>cd04127 Rab27A Rab27a subfamily	Back alignment and domain information

>KOG0087 consensus GTPase Rab11/YPT3, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0093 consensus GTPase Rab3, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional	Back alignment and domain information

>cd01871 Rac1_like Rac1-like subfamily	Back alignment and domain information

>KOG0079 consensus GTP-binding protein H-ray, small G protein superfamily [General function prediction only]	Back alignment and domain information

>cd04173 Rnd2_Rho7 Rnd2/Rho7 subfamily	Back alignment and domain information

>cd04107 Rab32_Rab38 Rab38/Rab32 subfamily	Back alignment and domain information

>cd04108 Rab36_Rab34 Rab34/Rab36 subfamily	Back alignment and domain information

>cd04122 Rab14 Rab14 subfamily	Back alignment and domain information

>cd04119 RJL RJL (RabJ-Like) subfamily	Back alignment and domain information

>cd01865 Rab3 Rab3 subfamily	Back alignment and domain information

>cd04109 Rab28 Rab28 subfamily	Back alignment and domain information

>cd04117 Rab15 Rab15 subfamily	Back alignment and domain information

>KOG4308 consensus LRR-containing protein [Function unknown]	Back alignment and domain information

>KOG0086 consensus GTPase Rab4, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0081 consensus GTPase Rab27, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>cd01867 Rab8_Rab10_Rab13_like Rab8/Sec4/Ypt2	Back alignment and domain information

>cd04134 Rho3 Rho3 subfamily	Back alignment and domain information

>cd01864 Rab19 Rab19 subfamily	Back alignment and domain information

>PF00071 Ras: Ras family; InterPro: IPR001806 Small GTPases form an independent superfamily within the larger class of regulatory GTP hydrolases	Back alignment and domain information

>cd04118 Rab24 Rab24 subfamily	Back alignment and domain information

>cd04102 RabL3 RabL3 (Rab-like3) subfamily	Back alignment and domain information

>cd04132 Rho4_like Rho4-like subfamily	Back alignment and domain information

>cd04106 Rab23_lke Rab23-like subfamily	Back alignment and domain information

>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]	Back alignment and domain information

>cd04110 Rab35 Rab35 subfamily	Back alignment and domain information

>KOG4308 consensus LRR-containing protein [Function unknown]	Back alignment and domain information

>PLN03071 GTP-binding nuclear protein Ran; Provisional	Back alignment and domain information

>cd04126 Rab20 Rab20 subfamily	Back alignment and domain information

>cd04136 Rap_like Rap-like subfamily	Back alignment and domain information

>smart00174 RHO Rho (Ras homology) subfamily of Ras-like small GTPases	Back alignment and domain information

>cd01869 Rab1_Ypt1 Rab1/Ypt1 subfamily	Back alignment and domain information

>cd01866 Rab2 Rab2 subfamily	Back alignment and domain information

>cd04141 Rit_Rin_Ric Rit/Rin/Ric subfamily	Back alignment and domain information

>cd04144 Ras2 Ras2 subfamily	Back alignment and domain information

>cd04113 Rab4 Rab4 subfamily	Back alignment and domain information

>cd04124 RabL2 RabL2 subfamily	Back alignment and domain information

>cd04125 RabA_like RabA-like subfamily	Back alignment and domain information

>cd00877 Ran Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases	Back alignment and domain information

>cd01868 Rab11_like Rab11-like	Back alignment and domain information

>cd04175 Rap1 Rap1 subgroup	Back alignment and domain information

>cd04111 Rab39 Rab39 subfamily	Back alignment and domain information

>cd04149 Arf6 Arf6 subfamily	Back alignment and domain information

>cd04138 H_N_K_Ras_like H-Ras/N-Ras/K-Ras subfamily	Back alignment and domain information

>cd04112 Rab26 Rab26 subfamily	Back alignment and domain information

>cd04140 ARHI_like ARHI subfamily	Back alignment and domain information

>PLN03110 Rab GTPase; Provisional	Back alignment and domain information

>PTZ00369 Ras-like protein; Provisional	Back alignment and domain information

>cd01860 Rab5_related Rab5-related subfamily	Back alignment and domain information

>smart00173 RAS Ras subfamily of RAS small GTPases	Back alignment and domain information

>cd04101 RabL4 RabL4 (Rab-like4) subfamily	Back alignment and domain information

>cd04135 Tc10 TC10 subfamily	Back alignment and domain information

>cd04130 Wrch_1 Wrch-1 subfamily	Back alignment and domain information

>cd01861 Rab6 Rab6 subfamily	Back alignment and domain information

>cd04116 Rab9 Rab9 subfamily	Back alignment and domain information

>cd01870 RhoA_like RhoA-like subfamily	Back alignment and domain information

>KOG0394 consensus Ras-related GTPase [General function prediction only]	Back alignment and domain information

>PLN03118 Rab family protein; Provisional	Back alignment and domain information

>cd01893 Miro1 Miro1 subfamily	Back alignment and domain information

>KOG0091 consensus GTPase Rab39, small G protein superfamily [General function prediction only]	Back alignment and domain information

>smart00177 ARF ARF-like small GTPases; ARF, ADP-ribosylation factor	Back alignment and domain information

>cd04145 M_R_Ras_like M-Ras/R-Ras-like subfamily	Back alignment and domain information

>cd04176 Rap2 Rap2 subgroup	Back alignment and domain information

>smart00176 RAN Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases	Back alignment and domain information

>cd04150 Arf1_5_like Arf1-Arf5-like subfamily	Back alignment and domain information

>smart00175 RAB Rab subfamily of small GTPases	Back alignment and domain information

>cd04129 Rho2 Rho2 subfamily	Back alignment and domain information

>cd01892 Miro2 Miro2 subfamily	Back alignment and domain information

>cd04154 Arl2 Arl2 subfamily	Back alignment and domain information

>cd04123 Rab21 Rab21 subfamily	Back alignment and domain information

>KOG0083 consensus GTPase Rab26/Rab37, small G protein superfamily [General function prediction only]	Back alignment and domain information

>cd01873 RhoBTB RhoBTB subfamily	Back alignment and domain information

>cd04115 Rab33B_Rab33A Rab33B/Rab33A subfamily	Back alignment and domain information

>cd04143 Rhes_like Rhes_like subfamily	Back alignment and domain information

>cd00157 Rho Rho (Ras homology) family	Back alignment and domain information

>PLN03108 Rab family protein; Provisional	Back alignment and domain information

>cd01862 Rab7 Rab7 subfamily	Back alignment and domain information

>PTZ00133 ADP-ribosylation factor; Provisional	Back alignment and domain information

>cd04114 Rab30 Rab30 subfamily	Back alignment and domain information

>PLN00223 ADP-ribosylation factor; Provisional	Back alignment and domain information

>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]	Back alignment and domain information

>cd04158 ARD1 ARD1 subfamily	Back alignment and domain information

>cd04177 RSR1 RSR1 subgroup	Back alignment and domain information

>cd04142 RRP22 RRP22 subfamily	Back alignment and domain information

>cd04151 Arl1 Arl1 subfamily	Back alignment and domain information

>KOG0393 consensus Ras-related small GTPase, Rho type [General function prediction only]	Back alignment and domain information

>cd01863 Rab18 Rab18 subfamily	Back alignment and domain information

>cd04162 Arl9_Arfrp2_like Arl9/Arfrp2-like subfamily	Back alignment and domain information

>cd00154 Rab Rab family	Back alignment and domain information

>PLN00023 GTP-binding protein; Provisional	Back alignment and domain information

>cd04157 Arl6 Arl6 subfamily	Back alignment and domain information

>cd00876 Ras Ras family	Back alignment and domain information

>cd04152 Arl4_Arl7 Arl4/Arl7 subfamily	Back alignment and domain information

>cd04103 Centaurin_gamma Centaurin gamma	Back alignment and domain information

>KOG0472 consensus Leucine-rich repeat protein [Function unknown]	Back alignment and domain information

>cd00878 Arf_Arl Arf (ADP-ribosylation factor)/Arl (Arf-like) small GTPases	Back alignment and domain information

>cd04139 RalA_RalB RalA/RalB subfamily	Back alignment and domain information

>KOG0097 consensus GTPase Rab14, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>cd04161 Arl2l1_Arl13_like Arl2l1/Arl13 subfamily	Back alignment and domain information

>cd04146 RERG_RasL11_like RERG/RasL11-like subfamily	Back alignment and domain information

>PF08477 Miro: Miro-like protein; InterPro: IPR013684 Mitochondrial Rho proteins (Miro-1, Q8IXI2 from SWISSPROT and Miro-2, Q8IXI1 from SWISSPROT) are atypical Rho GTPases	Back alignment and domain information

>cd04160 Arfrp1 Arfrp1 subfamily	Back alignment and domain information

>cd04153 Arl5_Arl8 Arl5/Arl8 subfamily	Back alignment and domain information

>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]	Back alignment and domain information

>cd04147 Ras_dva Ras-dva subfamily	Back alignment and domain information

>cd04156 ARLTS1 ARLTS1 subfamily	Back alignment and domain information

>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]	Back alignment and domain information

>cd04148 RGK RGK subfamily	Back alignment and domain information

>cd04159 Arl10_like Arl10-like subfamily	Back alignment and domain information

>PTZ00132 GTP-binding nuclear protein Ran; Provisional	Back alignment and domain information

>smart00178 SAR Sar1p-like members of the Ras-family of small GTPases	Back alignment and domain information

>cd04137 RheB Rheb (Ras Homolog Enriched in Brain) subfamily	Back alignment and domain information

>KOG0395 consensus Ras-related GTPase [General function prediction only]	Back alignment and domain information

>cd00879 Sar1 Sar1 subfamily	Back alignment and domain information

>PF00025 Arf: ADP-ribosylation factor family The prints entry specific to Sar1 proteins The Prosite entry specific to Sar1 proteins; InterPro: IPR006689 Small GTPases form an independent superfamily within the larger class of regulatory GTP hydrolases	Back alignment and domain information

>cd04155 Arl3 Arl3 subfamily	Back alignment and domain information

>KOG4252 consensus GTP-binding protein [Signal transduction mechanisms]	Back alignment and domain information

>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]	Back alignment and domain information

>COG1100 GTPase SAR1 and related small G proteins [General function prediction only]	Back alignment and domain information

>KOG0075 consensus GTP-binding ADP-ribosylation factor-like protein [General function prediction only]	Back alignment and domain information

>cd01890 LepA LepA subfamily	Back alignment and domain information

>cd04171 SelB SelB subfamily	Back alignment and domain information

>TIGR00231 small_GTP small GTP-binding protein domain	Back alignment and domain information

>cd01887 IF2_eIF5B IF2/eIF5B (initiation factors 2/ eukaryotic initiation factor 5B) subfamily	Back alignment and domain information

>KOG0073 consensus GTP-binding ADP-ribosylation factor-like protein ARL2 [Intracellular trafficking, secretion, and vesicular transport; Cytoskeleton]	Back alignment and domain information

>cd01897 NOG NOG1 is a nucleolar GTP-binding protein present in eukaryotes ranging from trypanosomes to humans	Back alignment and domain information

>KOG0070 consensus GTP-binding ADP-ribosylation factor Arf1 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PTZ00099 rab6; Provisional	Back alignment and domain information

>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional	Back alignment and domain information

>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional	Back alignment and domain information

>cd01891 TypA_BipA TypA (tyrosine phosphorylated protein A)/BipA subfamily	Back alignment and domain information

>TIGR02528 EutP ethanolamine utilization protein, EutP	Back alignment and domain information

>KOG0071 consensus GTP-binding ADP-ribosylation factor Arf6 (dArf3) [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0472 consensus Leucine-rich repeat protein [Function unknown]	Back alignment and domain information

>cd01898 Obg Obg subfamily	Back alignment and domain information

>KOG1673 consensus Ras GTPases [General function prediction only]	Back alignment and domain information

>PRK03003 GTP-binding protein Der; Reviewed	Back alignment and domain information

>PRK00454 engB GTP-binding protein YsxC; Reviewed	Back alignment and domain information

>KOG4341 consensus F-box protein containing LRR [General function prediction only]	Back alignment and domain information

>PRK15494 era GTPase Era; Provisional	Back alignment and domain information

>cd01879 FeoB Ferrous iron transport protein B (FeoB) subfamily	Back alignment and domain information

>PLN03210 Resistant to P	Back alignment and domain information

>PRK04213 GTP-binding protein; Provisional	Back alignment and domain information

>cd01889 SelB_euk SelB subfamily	Back alignment and domain information

>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional	Back alignment and domain information

>cd01878 HflX HflX subfamily	Back alignment and domain information

>cd00882 Ras_like_GTPase Ras-like GTPase superfamily	Back alignment and domain information

>TIGR03594 GTPase_EngA ribosome-associated GTPase EngA	Back alignment and domain information

>cd00881 GTP_translation_factor GTP translation factor family	Back alignment and domain information

>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional	Back alignment and domain information

>COG1160 Predicted GTPases [General function prediction only]	Back alignment and domain information

>cd01894 EngA1 EngA1 subfamily	Back alignment and domain information

>TIGR03598 GTPase_YsxC ribosome biogenesis GTP-binding protein YsxC/EngB	Back alignment and domain information

>TIGR03156 GTP_HflX GTP-binding protein HflX	Back alignment and domain information

>PRK03003 GTP-binding protein Der; Reviewed	Back alignment and domain information

>cd01888 eIF2_gamma eIF2-gamma (gamma subunit of initiation factor 2)	Back alignment and domain information

>TIGR01393 lepA GTP-binding protein LepA	Back alignment and domain information

>cd01876 YihA_EngB The YihA (EngB) subfamily	Back alignment and domain information

>KOG4341 consensus F-box protein containing LRR [General function prediction only]	Back alignment and domain information

>TIGR00436 era GTP-binding protein Era	Back alignment and domain information

>cd04164 trmE TrmE (MnmE, ThdF, MSS1) is a 3-domain protein found in bacteria and eukaryotes	Back alignment and domain information

>PRK05291 trmE tRNA modification GTPase TrmE; Reviewed	Back alignment and domain information

>TIGR00487 IF-2 translation initiation factor IF-2	Back alignment and domain information

>cd01895 EngA2 EngA2 subfamily	Back alignment and domain information

>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PRK15467 ethanolamine utilization protein EutP; Provisional	Back alignment and domain information

>PRK12299 obgE GTPase CgtA; Reviewed	Back alignment and domain information

>cd01881 Obg_like The Obg-like subfamily consists of five well-delimited, ancient subfamilies, namely Obg, DRG, YyaF/YchF, Ygr210, and NOG1	Back alignment and domain information

>TIGR00450 mnmE_trmE_thdF tRNA modification GTPase TrmE	Back alignment and domain information

>cd04105 SR_beta Signal recognition particle receptor, beta subunit (SR-beta)	Back alignment and domain information

>TIGR02729 Obg_CgtA Obg family GTPase CgtA	Back alignment and domain information

>cd04166 CysN_ATPS CysN_ATPS subfamily	Back alignment and domain information

>PRK00093 GTP-binding protein Der; Reviewed	Back alignment and domain information

>cd04163 Era Era subfamily	Back alignment and domain information

>KOG3883 consensus Ras family small GTPase [Signal transduction mechanisms]	Back alignment and domain information

>PRK09518 bifunctional cytidylate kinase/GTPase Der; Reviewed	Back alignment and domain information

>PRK00093 GTP-binding protein Der; Reviewed	Back alignment and domain information

>PLN03210 Resistant to P	Back alignment and domain information

>CHL00189 infB translation initiation factor 2; Provisional	Back alignment and domain information

>KOG0074 consensus GTP-binding ADP-ribosylation factor-like protein ARL3 [General function prediction only]	Back alignment and domain information

>cd04104 p47_IIGP_like p47 (47-kDa) family	Back alignment and domain information

>PF00009 GTP_EFTU: Elongation factor Tu GTP binding domain; InterPro: IPR000795 Elongation factors belong to a family of proteins that promote the GTP-dependent binding of aminoacyl tRNA to the A site of ribosomes during protein biosynthesis, and catalyse the translocation of the synthesised protein chain from the A to the P site	Back alignment and domain information

>KOG0072 consensus GTP-binding ADP-ribosylation factor-like protein ARL1 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PRK05306 infB translation initiation factor IF-2; Validated	Back alignment and domain information

>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PRK12296 obgE GTPase CgtA; Reviewed	Back alignment and domain information

>TIGR00483 EF-1_alpha translation elongation factor EF-1 alpha	Back alignment and domain information

>PRK11058 GTPase HflX; Provisional	Back alignment and domain information

>PRK12297 obgE GTPase CgtA; Reviewed	Back alignment and domain information

>TIGR00475 selB selenocysteine-specific elongation factor SelB	Back alignment and domain information

>TIGR03594 GTPase_EngA ribosome-associated GTPase EngA	Back alignment and domain information

>cd00880 Era_like Era (E	Back alignment and domain information

>PRK00089 era GTPase Era; Reviewed	Back alignment and domain information

>PRK05433 GTP-binding protein LepA; Provisional	Back alignment and domain information

>cd04167 Snu114p Snu114p subfamily	Back alignment and domain information

>TIGR00491 aIF-2 translation initiation factor aIF-2/yIF-2	Back alignment and domain information

>PRK12317 elongation factor 1-alpha; Reviewed	Back alignment and domain information

>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PRK09518 bifunctional cytidylate kinase/GTPase Der; Reviewed	Back alignment and domain information

>cd04165 GTPBP1_like GTPBP1-like	Back alignment and domain information

>KOG0096 consensus GTPase Ran/TC4/GSP1 (nuclear protein transport pathway), small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG0218 Predicted GTPase [General function prediction only]	Back alignment and domain information

>PF02421 FeoB_N: Ferrous iron transport protein B; InterPro: IPR011619 Escherichia coli has an iron(II) transport system (feo) which may make an important contribution to the iron supply of the cell under anaerobic conditions	Back alignment and domain information

>TIGR00437 feoB ferrous iron transporter FeoB	Back alignment and domain information

>PF04670 Gtr1_RagA: Gtr1/RagA G protein conserved region; InterPro: IPR006762 GTR1 was first identified in Saccharomyces cerevisiae (Baker's yeast) as a suppressor of a mutation in RCC1	Back alignment and domain information

>PF10662 PduV-EutP: Ethanolamine utilisation - propanediol utilisation; InterPro: IPR012381 Members of this family function in ethanolamine [] and propanediol [] degradation pathways	Back alignment and domain information

>KOG0076 consensus GTP-binding ADP-ribosylation factor-like protein yARL3 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PRK09554 feoB ferrous iron transport protein B; Reviewed	Back alignment and domain information

>TIGR03680 eif2g_arch translation initiation factor 2 subunit gamma	Back alignment and domain information

>PRK10218 GTP-binding protein; Provisional	Back alignment and domain information

>PRK04000 translation initiation factor IF-2 subunit gamma; Validated	Back alignment and domain information

>PRK10512 selenocysteinyl-tRNA-specific translation factor; Provisional	Back alignment and domain information

>PRK12298 obgE GTPase CgtA; Reviewed	Back alignment and domain information

>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>cd01896 DRG The developmentally regulated GTP-binding protein (DRG) subfamily is an uncharacterized member of the Obg family, an evolutionary branch of GTPase superfamily proteins	Back alignment and domain information

>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]	Back alignment and domain information

>cd01883 EF1_alpha Eukaryotic elongation factor 1 (EF1) alpha subfamily	Back alignment and domain information

>cd04168 TetM_like Tet(M)-like subfamily	Back alignment and domain information

>KOG4423 consensus GTP-binding protein-like, RAS superfamily [Signal transduction mechanisms]	Back alignment and domain information

>COG2229 Predicted GTPase [General function prediction only]	Back alignment and domain information

>PRK04004 translation initiation factor IF-2; Validated	Back alignment and domain information

>TIGR01394 TypA_BipA GTP-binding protein TypA/BipA	Back alignment and domain information

>cd01884 EF_Tu EF-Tu subfamily	Back alignment and domain information

>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]	Back alignment and domain information

>TIGR02034 CysN sulfate adenylyltransferase, large subunit	Back alignment and domain information

>COG0486 ThdF Predicted GTPase [General function prediction only]	Back alignment and domain information

>cd01885 EF2 EF2 (for archaea and eukarya)	Back alignment and domain information

>PRK05124 cysN sulfate adenylyltransferase subunit 1; Provisional	Back alignment and domain information

>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]	Back alignment and domain information

>cd04169 RF3 RF3 subfamily	Back alignment and domain information

>TIGR00485 EF-Tu translation elongation factor TU	Back alignment and domain information

>COG1159 Era GTPase [General function prediction only]	Back alignment and domain information

>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]	Back alignment and domain information

>COG1160 Predicted GTPases [General function prediction only]	Back alignment and domain information

>PLN00043 elongation factor 1-alpha; Provisional	Back alignment and domain information

>PRK12735 elongation factor Tu; Reviewed	Back alignment and domain information

>cd01886 EF-G Elongation factor G (EF-G) subfamily	Back alignment and domain information

>KOG1423 consensus Ras-like GTPase ERA [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]	Back alignment and domain information

>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]	Back alignment and domain information

>PRK05506 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Provisional	Back alignment and domain information

>COG1084 Predicted GTPase [General function prediction only]	Back alignment and domain information

>PRK12736 elongation factor Tu; Reviewed	Back alignment and domain information

>PRK13351 elongation factor G; Reviewed	Back alignment and domain information

>cd04170 EF-G_bact Elongation factor G (EF-G) subfamily	Back alignment and domain information

>PRK13768 GTPase; Provisional	Back alignment and domain information

>cd01850 CDC_Septin CDC/Septin	Back alignment and domain information

>cd01899 Ygr210 Ygr210 subfamily	Back alignment and domain information

>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]	Back alignment and domain information

>TIGR00503 prfC peptide chain release factor 3	Back alignment and domain information

>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]	Back alignment and domain information

>cd01852 AIG1 AIG1 (avrRpt2-induced gene 1)	Back alignment and domain information

>PF03029 ATP_bind_1: Conserved hypothetical ATP binding protein; InterPro: IPR004130 Members of this family are found in a range of archaea and eukaryotes and have hypothesised ATP binding activity	Back alignment and domain information

>PLN03126 Elongation factor Tu; Provisional	Back alignment and domain information

>CHL00071 tufA elongation factor Tu	Back alignment and domain information

>PRK00741 prfC peptide chain release factor 3; Provisional	Back alignment and domain information

>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A	Back alignment and domain information

>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]	Back alignment and domain information

>PRK00049 elongation factor Tu; Reviewed	Back alignment and domain information

>TIGR00484 EF-G translation elongation factor EF-G	Back alignment and domain information

>PF05783 DLIC: Dynein light intermediate chain (DLIC); InterPro: IPR022780 This entry consists of several eukaryotic dynein light intermediate chain proteins	Back alignment and domain information

>cd01853 Toc34_like Toc34-like (Translocon at the Outer-envelope membrane of Chloroplasts)	Back alignment and domain information

>PTZ00327 eukaryotic translation initiation factor 2 gamma subunit; Provisional	Back alignment and domain information

>PTZ00141 elongation factor 1- alpha; Provisional	Back alignment and domain information

>PRK14845 translation initiation factor IF-2; Provisional	Back alignment and domain information

>TIGR00991 3a0901s02IAP34 GTP-binding protein (Chloroplast Envelope Protein Translocase)	Back alignment and domain information

>PF09439 SRPRB: Signal recognition particle receptor beta subunit; InterPro: IPR019009 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]	Back alignment and domain information

>COG3596 Predicted GTPase [General function prediction only]	Back alignment and domain information

>KOG1489 consensus Predicted GTP-binding protein (ODN superfamily) [General function prediction only]	Back alignment and domain information

>KOG0077 consensus Vesicle coat complex COPII, GTPase subunit SAR1 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1191 consensus Mitochondrial GTPase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK09602 translation-associated GTPase; Reviewed	Back alignment and domain information

>KOG3886 consensus GTP-binding protein [Signal transduction mechanisms]	Back alignment and domain information

>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]	Back alignment and domain information

>COG0370 FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism]	Back alignment and domain information

>KOG0462 consensus Elongation factor-type GTP-binding protein [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK12740 elongation factor G; Reviewed	Back alignment and domain information

>PF01926 MMR_HSR1: 50S ribosome-binding GTPase; InterPro: IPR002917 Human HSR1, has been localized to the human MHC class I region and is highly homologous to a putative GTP-binding protein, MMR1 from mouse	Back alignment and domain information

>COG5256 TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>COG4917 EutP Ethanolamine utilization protein [Amino acid transport and metabolism]	Back alignment and domain information

>PLN03127 Elongation factor Tu; Provisional	Back alignment and domain information

>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A	Back alignment and domain information

>PF04548 AIG1: AIG1 family; InterPro: IPR006703 This entry represents a domain found in Arabidopsis protein AIG1 which appears to be involved in plant resistance to bacteria	Back alignment and domain information

>KOG3905 consensus Dynein light intermediate chain [Cell motility]	Back alignment and domain information

>cd01882 BMS1 Bms1	Back alignment and domain information

>COG2262 HflX GTPases [General function prediction only]	Back alignment and domain information

>KOG2982 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]	Back alignment and domain information

>PRK09866 hypothetical protein; Provisional	Back alignment and domain information

>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence	Back alignment and domain information

>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]	Back alignment and domain information

>PRK12739 elongation factor G; Reviewed	Back alignment and domain information

>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]	Back alignment and domain information

>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]	Back alignment and domain information

>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]	Back alignment and domain information

>KOG2982 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>cd00066 G-alpha G protein alpha subunit	Back alignment and domain information

>TIGR00073 hypB hydrogenase accessory protein HypB	Back alignment and domain information

>TIGR00490 aEF-2 translation elongation factor aEF-2	Back alignment and domain information

>PRK00007 elongation factor G; Reviewed	Back alignment and domain information

>TIGR02836 spore_IV_A stage IV sporulation protein A	Back alignment and domain information

>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]	Back alignment and domain information

>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]	Back alignment and domain information

>PRK09435 membrane ATPase/protein kinase; Provisional	Back alignment and domain information

>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]	Back alignment and domain information

>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]	Back alignment and domain information

>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]	Back alignment and domain information

>COG0532 InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>KOG0090 consensus Signal recognition particle receptor, beta subunit (small G protein superfamily) [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG5192 BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>smart00275 G_alpha G protein alpha subunit	Back alignment and domain information

>COG0481 LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>COG0536 Obg Predicted GTPase [General function prediction only]	Back alignment and domain information

>smart00010 small_GTPase Small GTPase of the Ras superfamily; ill-defined subfamily	Back alignment and domain information

>PRK10463 hydrogenase nickel incorporation protein HypB; Provisional	Back alignment and domain information

>KOG1145 consensus Mitochondrial translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>KOG0461 consensus Selenocysteine-specific elongation factor [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>TIGR00101 ureG urease accessory protein UreG	Back alignment and domain information

>COG2895 CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism]	Back alignment and domain information

>KOG0463 consensus GTP-binding protein GP-1 [General function prediction only]	Back alignment and domain information

>TIGR00993 3a0901s04IAP86 chloroplast protein import component Toc86/159, G and M domains	Back alignment and domain information

>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]	Back alignment and domain information

>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]	Back alignment and domain information

>COG5257 GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]	Back alignment and domain information

>PTZ00416 elongation factor 2; Provisional	Back alignment and domain information

>TIGR00750 lao LAO/AO transport system ATPase	Back alignment and domain information

>PLN00116 translation elongation factor EF-2 subunit; Provisional	Back alignment and domain information

>KOG0458 consensus Elongation factor 1 alpha [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>TIGR00157 ribosome small subunit-dependent GTPase A	Back alignment and domain information

>PRK07560 elongation factor EF-2; Reviewed	Back alignment and domain information

>smart00053 DYNc Dynamin, GTPase	Back alignment and domain information

>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription]	Back alignment and domain information

>PF00350 Dynamin_N: Dynamin family; InterPro: IPR001401 Membrane transport between compartments in eukaryotic cells requires proteins that allow the budding and scission of nascent cargo vesicles from one compartment and their targeting and fusion with another	Back alignment and domain information

>COG1217 TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms]	Back alignment and domain information

>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]	Back alignment and domain information

>KOG1143 consensus Predicted translation elongation factor [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>KOG0448 consensus Mitofusin 1 GTPase, involved in mitochondrila biogenesis [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>COG3276 SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PLN03150 hypothetical protein; Provisional	Back alignment and domain information

>KOG1490 consensus GTP-binding protein CRFG/NOG1 (ODN superfamily) [General function prediction only]	Back alignment and domain information

>KOG3735 consensus Tropomodulin and leiomodulin [Cytoskeleton]	Back alignment and domain information

>PLN03150 hypothetical protein; Provisional	Back alignment and domain information

>KOG1547 consensus Septin CDC10 and related P-loop GTPases [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms; Cytoskeleton]	Back alignment and domain information

>PF00735 Septin: Septin; InterPro: IPR000038 Septins constitute a eukaryotic family of guanine nucleotide-binding proteins, most of which polymerise to form filaments []	Back alignment and domain information

>COG1163 DRG Predicted GTPase [General function prediction only]	Back alignment and domain information

>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]	Back alignment and domain information

>KOG3735 consensus Tropomodulin and leiomodulin [Cytoskeleton]	Back alignment and domain information

>KOG0082 consensus G-protein alpha subunit (small G protein superfamily) [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]	Back alignment and domain information

>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A	Back alignment and domain information

>cd01857 HSR1_MMR1 HSR1/MMR1	Back alignment and domain information

>KOG1144 consensus Translation initiation factor 5B (eIF-5B) [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B	Back alignment and domain information

>PF03308 ArgK: ArgK protein; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components	Back alignment and domain information

>cd01859 MJ1464 MJ1464	Back alignment and domain information

>COG0050 TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>cd01855 YqeH YqeH	Back alignment and domain information

>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A	Back alignment and domain information

>KOG2123 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>TIGR03597 GTPase_YqeH ribosome biogenesis GTPase YqeH	Back alignment and domain information

>KOG2123 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B	Back alignment and domain information

>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]	Back alignment and domain information

>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]	Back alignment and domain information

>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]	Back alignment and domain information

>KOG3887 consensus Predicted small GTPase involved in nuclear protein import [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1954 consensus Endocytosis/signaling protein EHD1 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0468 consensus U5 snRNP-specific protein [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type	Back alignment and domain information

>cd04178 Nucleostemin_like Nucleostemin-like	Back alignment and domain information

>cd01858 NGP_1 NGP-1	Back alignment and domain information

>PF00503 G-alpha: G-protein alpha subunit; InterPro: IPR001019 Guanine nucleotide binding proteins (G proteins) are membrane-associated, heterotrimeric proteins composed of three subunits: alpha (IPR001019 from INTERPRO), beta (IPR001632 from INTERPRO) and gamma (IPR001770 from INTERPRO) []	Back alignment and domain information

>cd01856 YlqF YlqF	Back alignment and domain information

>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type	Back alignment and domain information

>cd01900 YchF YchF subfamily	Back alignment and domain information

>COG0480 FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK09563 rbgA GTPase YlqF; Reviewed	Back alignment and domain information

>TIGR03596 GTPase_YlqF ribosome biogenesis GTP-binding protein YlqF	Back alignment and domain information

>KOG2486 consensus Predicted GTPase [General function prediction only]	Back alignment and domain information

>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]	Back alignment and domain information

>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]	Back alignment and domain information

>cd01855 YqeH YqeH	Back alignment and domain information

>COG5258 GTPBP1 GTPase [General function prediction only]	Back alignment and domain information

>PRK13695 putative NTPase; Provisional	Back alignment and domain information

>PRK00098 GTPase RsgA; Reviewed	Back alignment and domain information

>COG1161 Predicted GTPases [General function prediction only]	Back alignment and domain information

>PRK09601 GTP-binding protein YchF; Reviewed	Back alignment and domain information

>TIGR03348 VI_IcmF type VI secretion protein IcmF	Back alignment and domain information

>PTZ00258 GTP-binding protein; Provisional	Back alignment and domain information

>cd01851 GBP Guanylate-binding protein (GBP), N-terminal domain	Back alignment and domain information

>cd01859 MJ1464 MJ1464	Back alignment and domain information

>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A	Back alignment and domain information

>cd01858 NGP_1 NGP-1	Back alignment and domain information

>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A	Back alignment and domain information

>COG5019 CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton]	Back alignment and domain information

>PRK15386 type III secretion protein GogB; Provisional	Back alignment and domain information

>PRK13796 GTPase YqeH; Provisional	Back alignment and domain information

>PRK12289 GTPase RsgA; Reviewed	Back alignment and domain information

>KOG0410 consensus Predicted GTP binding protein [General function prediction only]	Back alignment and domain information

>KOG3864 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG2655 consensus Septin family protein (P-loop GTPase) [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A	Back alignment and domain information

>cd01854 YjeQ_engC YjeQ/EngC	Back alignment and domain information

>PRK15386 type III secretion protein GogB; Provisional	Back alignment and domain information

>cd01849 YlqF_related_GTPase YlqF-related GTPases	Back alignment and domain information

>TIGR00157 ribosome small subunit-dependent GTPase A	Back alignment and domain information

>KOG3929 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>cd01849 YlqF_related_GTPase YlqF-related GTPases	Back alignment and domain information

>KOG0460 consensus Mitochondrial translation elongation factor Tu [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK12288 GTPase RsgA; Reviewed	Back alignment and domain information

>KOG3864 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PRK12289 GTPase RsgA; Reviewed	Back alignment and domain information

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]	Back alignment and domain information

>KOG0085 consensus G protein subunit Galphaq/Galphay, small G protein superfamily [Signal transduction mechanisms]	Back alignment and domain information

>COG4108 PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>cd03114 ArgK-like The function of this protein family is unkown	Back alignment and domain information

>PRK13796 GTPase YqeH; Provisional	Back alignment and domain information

>KOG1534 consensus Putative transcription factor FET5 [Transcription]	Back alignment and domain information

>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]	Back alignment and domain information

>KOG1486 consensus GTP-binding protein DRG2 (ODN superfamily) [Signal transduction mechanisms]	Back alignment and domain information

>TIGR03597 GTPase_YqeH ribosome biogenesis GTPase YqeH	Back alignment and domain information

>cd01854 YjeQ_engC YjeQ/EngC	Back alignment and domain information

>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]	Back alignment and domain information

>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A	Back alignment and domain information

>PRK12288 GTPase RsgA; Reviewed	Back alignment and domain information

>PRK00098 GTPase RsgA; Reviewed	Back alignment and domain information

>KOG3859 consensus Septins (P-loop GTPases) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PRK14722 flhF flagellar biosynthesis regulator FlhF; Provisional	Back alignment and domain information

>PRK10416 signal recognition particle-docking protein FtsY; Provisional	Back alignment and domain information

>PRK14737 gmk guanylate kinase; Provisional	Back alignment and domain information

>PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis	Back alignment and domain information

>cd01857 HSR1_MMR1 HSR1/MMR1	Back alignment and domain information

>cd03112 CobW_like The function of this protein family is unkown	Back alignment and domain information

>PRK08118 topology modulation protein; Reviewed	Back alignment and domain information

>PF02492 cobW: CobW/HypB/UreG, nucleotide-binding domain; InterPro: IPR003495 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt	Back alignment and domain information

>TIGR00064 ftsY signal recognition particle-docking protein FtsY	Back alignment and domain information

>PRK14974 cell division protein FtsY; Provisional	Back alignment and domain information

>COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism]	Back alignment and domain information

>PRK07261 topology modulation protein; Provisional	Back alignment and domain information

>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids	Back alignment and domain information

>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes	Back alignment and domain information

>KOG0099 consensus G protein subunit Galphas, small G protein superfamily [Signal transduction mechanisms]	Back alignment and domain information

>TIGR01425 SRP54_euk signal recognition particle protein SRP54	Back alignment and domain information

>PF03266 NTPase_1: NTPase; InterPro: IPR004948 This entry represents a family of nucleoside-triphosphatases which have activity towards ATP, GTP, CTP, TTP and UTP and may hydrolyse nucleoside diphosphates with lower efficiency []	Back alignment and domain information

>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]	Back alignment and domain information

>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]	Back alignment and domain information

>PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B	Back alignment and domain information

>KOG0467 consensus Translation elongation factor 2/ribosome biogenesis protein RIA1 and related proteins [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes	Back alignment and domain information

>cd01856 YlqF YlqF	Back alignment and domain information

>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF03215 Rad17: Rad17 cell cycle checkpoint protein	Back alignment and domain information

>KOG0447 consensus Dynamin-like GTP binding protein [General function prediction only]	Back alignment and domain information

>TIGR00092 GTP-binding protein YchF	Back alignment and domain information

>KOG1533 consensus Predicted GTPase [General function prediction only]	Back alignment and domain information

>smart00072 GuKc Guanylate kinase homologues	Back alignment and domain information

>cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2	Back alignment and domain information

>PRK10867 signal recognition particle protein; Provisional	Back alignment and domain information

>KOG4273 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars	Back alignment and domain information

>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	Back alignment and domain information

>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]	Back alignment and domain information

>PF13521 AAA_28: AAA domain; PDB: 1LW7_A	Back alignment and domain information

>KOG1491 consensus Predicted GTP-binding protein (ODN superfamily) [General function prediction only]	Back alignment and domain information

>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]	Back alignment and domain information

>PF13238 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB_A 3IIM_A 2AXP_A 3KB2_A 1KHT_A 1NKS_A 3H86_C	Back alignment and domain information

>COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism]	Back alignment and domain information

>PF13555 AAA_29: P-loop containing region of AAA domain	Back alignment and domain information

>smart00382 AAA ATPases associated with a variety of cellular activities	Back alignment and domain information

>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport	Back alignment and domain information

>PRK06217 hypothetical protein; Validated	Back alignment and domain information

>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional	Back alignment and domain information

>PRK00771 signal recognition particle protein Srp54; Provisional	Back alignment and domain information

>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		1363
2bnh_A		457	Porcine Ribonuclease Inhibitor Length = 457		5e-06
3tsr_E		457	X-Ray Structure Of Mouse Ribonuclease Inhibitor Com		3e-05

>pdb|2BNH|A Chain A, Porcine Ribonuclease Inhibitor Length = 457

Back alignment and structure

Iteration: 1

Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 73/336 (21%), Positives = 135/336 (40%), Gaps = 50/336 (14%) Query: 97 LLDCSSNVKQVVFRRNKFDAECLAEISDVVRRNGVIKEVMFTESGIKNAGASLLASALKV 156 LLD +++++ + A ++ V+R +KE+ + + I AGA +L L Sbjct: 133 LLDPQCHLEKLQLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLAD 192 Query: 157 NDT-LEELQIWEDSIGSKGAEELSKMIEANSTLKSLTIFDSSSLTATPLISAVLARNRAM 215 + LE L++ + ++L ++ + ++L+ L + Sbjct: 193 SACQLETLRLENCGLTPANCKDLCGIVASQASLRELDL---------------------- 230 Query: 216 EVHVWSGENGEKSSKVVEFLP-------ENGTLRIYRLDVSGS-CRVACS-LGCNTTVKS 266 G NG + + E P TL ++ D++ S CR C L T+K Sbjct: 231 ------GSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVLQAKETLKE 284 Query: 267 LDMTGVRLKSRWAKEFRWVLQQNQSLKEVILSKTC-LKDKGVVYVAAGLFKNRSLESLYL 325 L + G +L A+ L Q E + K+C L +V+ L +N+ L L L Sbjct: 285 LSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSLMLTQNKHLLELQL 344 Query: 326 HGNWFSGVGVEHLLCPLSRFSSLQSQANITLRSVTFGGGRTKIGRDGIAAILQMLTTNET 385 N G++ L L SQ TLR + G ++ G +++ +L N + Sbjct: 345 SSNKLGDSGIQELCQAL-------SQPGTTLRVLCL--GDCEVTNSGCSSLASLLLANRS 395 Query: 386 VTQLGIYDDQSLRPDDFVRIFKSL-QKNASLRQLSL 420 + +L + ++ P +++ SL Q +L QL L Sbjct: 396 LRELDLSNNCVGDP-GVLQLLGSLEQPGCALEQLVL 430

PyMOL of 2bnh

>pdb|3TSR|E Chain E, X-Ray Structure Of Mouse Ribonuclease Inhibitor Complexed With Mouse Ribonuclease 1 Length = 457

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1363
1z7x_W		461	Ribonuclease inhibitor; leucine-rich repeat, enzym	7e-29
1z7x_W		461	Ribonuclease inhibitor; leucine-rich repeat, enzym	9e-28
1z7x_W		461	Ribonuclease inhibitor; leucine-rich repeat, enzym	3e-27
1z7x_W		461	Ribonuclease inhibitor; leucine-rich repeat, enzym	7e-27
3dpu_A		535	RAB family protein; roccor, G-domain, COR, GTP-bin	1e-27
2ca6_A		386	RAN GTPase-activating protein 1; GAP, GTPase activ	3e-27
2ca6_A		386	RAN GTPase-activating protein 1; GAP, GTPase activ	1e-26
2ca6_A		386	RAN GTPase-activating protein 1; GAP, GTPase activ	1e-23
2ca6_A		386	RAN GTPase-activating protein 1; GAP, GTPase activ	7e-22
3goz_A		362	Leucine-rich repeat-containing protein; LEGL7, NES	3e-22
3goz_A		362	Leucine-rich repeat-containing protein; LEGL7, NES	3e-22
3goz_A		362	Leucine-rich repeat-containing protein; LEGL7, NES	4e-13
3un9_A		372	NLR family member X1; leucine rich repeat (LRR), a	2e-21
3un9_A		372	NLR family member X1; leucine rich repeat (LRR), a	2e-18
3un9_A		372	NLR family member X1; leucine rich repeat (LRR), a	1e-13
3un9_A		372	NLR family member X1; leucine rich repeat (LRR), a	7e-11
1io0_A		185	Tropomodulin; LRR protein, right-handed super-heli	2e-19
1io0_A		185	Tropomodulin; LRR protein, right-handed super-heli	3e-13
1io0_A		185	Tropomodulin; LRR protein, right-handed super-heli	1e-12
1io0_A		185	Tropomodulin; LRR protein, right-handed super-heli	2e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-18
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-12
3dpt_A		332	ROCO, RAB family protein; alpha-beta-protein, sign	4e-17
1pgv_A		197	TMD-1, tropomodulin TMD-1; structural genomics, PS	2e-16
1pgv_A		197	TMD-1, tropomodulin TMD-1; structural genomics, PS	1e-13
1pgv_A		197	TMD-1, tropomodulin TMD-1; structural genomics, PS	1e-12
1pgv_A		197	TMD-1, tropomodulin TMD-1; structural genomics, PS	8e-10
1pgv_A		197	TMD-1, tropomodulin TMD-1; structural genomics, PS	2e-09
1pgv_A		197	TMD-1, tropomodulin TMD-1; structural genomics, PS	5e-06
2ra8_A		362	Uncharacterized protein Q64V53_bacfr; WGR domain,	2e-05
3r7w_A		307	Gtpase1, GTP-binding protein GTR1; RAG gtpases, GT	4e-04

>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461	Back alignment and structure

 Score =  121 bits (305), Expect = 7e-29
 Identities = 57/394 (14%), Positives = 126/394 (31%), Gaps = 47/394 (11%)

Query: 74  TSLKHLEFHSVEWEIEQMRILGLLLDCSSNVKQVVFRRNKFDAECLAEISDVVRRNGVIK 133
             ++ L+    E    +   L  LL      + V             +IS  +R N  + 
Sbjct: 3   LDIQSLDIQCEELSDARWAELLPLL---QQCQVVRLDDCGLTEARCKDISSALRVNPALA 59

Query: 134 EVMFTESGIKNAGASLLASALKV-NDTLEELQIWEDSIGSKGAEELSKMIEANSTLKSLT 192
           E+    + + + G   +   L+  +  +++L +    +   G   LS  +    TL+ L 
Sbjct: 60  ELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELH 119

Query: 193 IFDS--SSLTATPLISAVLARNRAMEVHVWSGENGEKSSKVVEFLPENGTLRIYR--LDV 248
           + D+         L   +L     +E                        L++    L  
Sbjct: 120 LSDNLLGDAGLQLLCEGLLDPQCRLE-----------------------KLQLEYCSLSA 156

Query: 249 SGSCRVACSLGCNTTVKSLDMTGVRLKSRWAKEFRWVLQQNQ-SLKEVILSKTCLKDKGV 307
           +    +A  L      K L ++   +     +     L+ +   L+ + L    +     
Sbjct: 157 ASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNC 216

Query: 308 VYVAAGLFKNRSLESLYLHGNWFSGVGVEHLLCPLSRFSSLQSQANITLRSVTFGGGRTK 367
             +   +    SL  L L  N    VG+  L              +  LR++        
Sbjct: 217 RDLCGIVASKASLRELALGSNKLGDVGMAEL-------CPGLLHPSSRLRTLWIWE--CG 267

Query: 368 IGRDGIAAILQMLTTNETVTQLGIYDDQSLRPDDFVRIFKSLQK-NASLRQLSLQGCK-G 425
           I   G   + ++L   E++ +L +  ++ L  +    + ++L +    L  L ++ C   
Sbjct: 268 ITAKGCGDLCRVLRAKESLKELSLAGNE-LGDEGARLLCETLLEPGCQLESLWVKSCSFT 326

Query: 426 VRGELVQQAIMETLQVNPWIEDIDLERTPLKNSG 459
                        L  N ++ ++ +    L+++G
Sbjct: 327 AAC---CSHFSSVLAQNRFLLELQISNNRLEDAG 357

PyMOL of 1z7x

>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461	Back alignment and structure

>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461	Back alignment and structure

>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461	Back alignment and structure

>3dpu_A RAB family protein; roccor, G-domain, COR, GTP-binding, nucleotide-binding, SIGN protein; 2.90A {Chlorobaculum tepidum} Length = 535	Back alignment and structure

>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386	Back alignment and structure

>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386	Back alignment and structure

>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386	Back alignment and structure

>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386	Back alignment and structure

>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362	Back alignment and structure

>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362	Back alignment and structure

>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362	Back alignment and structure

>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Length = 372	Back alignment and structure

>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Length = 372	Back alignment and structure

>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Length = 372	Back alignment and structure

>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Length = 372	Back alignment and structure

>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 Length = 185	Back alignment and structure

>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 Length = 185	Back alignment and structure

>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 Length = 185	Back alignment and structure

>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 Length = 185	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3dpt_A ROCO, RAB family protein; alpha-beta-protein, signaling protein; 2.90A {Chlorobaculum tepidum} Length = 332	Back alignment and structure

>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 Length = 197	Back alignment and structure

>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 Length = 197	Back alignment and structure

>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 Length = 197	Back alignment and structure

>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 Length = 197	Back alignment and structure

>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 Length = 197	Back alignment and structure

>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 Length = 197	Back alignment and structure

>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362	Back alignment and structure

>3r7w_A Gtpase1, GTP-binding protein GTR1; RAG gtpases, GTR1P, GTR2P, MTOR, protein transport; HET: GNP; 2.77A {Saccharomyces cerevisiae} Length = 307	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		1363
d1pgva_		167	c.10.1.1 (A:) Tropomodulin C-terminal domain {nema	4e-07
d1z7xw1		460	c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (	1e-06
d1z7xw1		460	c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (	3e-06
d1z7xw1		460	c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (	1e-05
d1z7xw1		460	c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (	3e-05
d1z7xw1		460	c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (	8e-05
d1z7xw1		460	c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (	8e-05
d1z7xw1		460	c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (	7e-04
d2bcgy1		194	c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Sac	8e-05
d2ca6a1		344	c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom	1e-04
d2ca6a1		344	c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom	0.003
d2fu5c1		173	c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [Ta	3e-04
d1g16a_		166	c.37.1.8 (A:) Rab-related protein Sec4 {Baker's ye	0.001
d2ew1a1		171	c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [Ta	0.002
d1x3sa1		177	c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [Ta	0.004

>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 167	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: RNI-like
family: 28-residue LRR
domain: Tropomodulin C-terminal domain
species: nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 49.2 bits (116), Expect = 4e-07
 Identities = 22/145 (15%), Positives = 59/145 (40%), Gaps = 5/145 (3%)

Query: 73  HTSLKHLEFHSVE-WEIEQMRILGLLLDCSSNVKQVVFRRNKFDAECLAEISDVVRRNGV 131
            T LK +  ++++    E++R L      S ++++               + +++  +  
Sbjct: 14  DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPS 73

Query: 132 IKEVMFTESGIKNAGASLLASALKVNDTLEELQI---WEDSIGSKGAEELSKMIEANSTL 188
           ++ +    + +     + L  +  V  ++ E +     +  +G++   ++   IE N +L
Sbjct: 74  LRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESL 133

Query: 189 KSLTIFDSSSLTATPLISAVLARNR 213
             + I   +S+ A   +S  L RN 
Sbjct: 134 LRVGI-SFASMEARHRVSEALERNY 157

PyMOL of d1pgva_

>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460	Back information, alignment and structure

>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460	Back information, alignment and structure

>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460	Back information, alignment and structure

>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460	Back information, alignment and structure

>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460	Back information, alignment and structure

>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460	Back information, alignment and structure

>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460	Back information, alignment and structure

>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 194	Back information, alignment and structure

>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344	Back information, alignment and structure

>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344	Back information, alignment and structure

>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]} Length = 173	Back information, alignment and structure

>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 166	Back information, alignment and structure

>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]} Length = 171	Back information, alignment and structure

>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]} Length = 177	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1363
d1z7xw1		460	Ribonuclease inhibitor {Human (Homo sapiens) [TaxI	100.0
d1z7xw1		460	Ribonuclease inhibitor {Human (Homo sapiens) [TaxI	100.0
d2ca6a1		344	Rna1p (RanGAP1), N-terminal domain {Fission yeast	100.0
d2ca6a1		344	Rna1p (RanGAP1), N-terminal domain {Fission yeast	100.0
d1kmqa_		177	RhoA {Human (Homo sapiens) [TaxId: 9606]}	99.86
d2atxa1		185	RhoQ {Human (Homo sapiens) [TaxId: 9606]}	99.85
d1z08a1		167	Rab21 {Human (Homo sapiens) [TaxId: 9606]}	99.84
d1z2aa1		164	Rab23 {Mouse (Mus musculus) [TaxId: 10090]}	99.84
d1mh1a_		183	Rac {Human (Homo sapiens) [TaxId: 9606]}	99.83
d3raba_		169	Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}	99.83
d2ngra_		191	CDC42 {Human (Homo sapiens) [TaxId: 9606]}	99.83
d2bcgy1		194	GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisi	99.83
d2ew1a1		171	Rab30 {Human (Homo sapiens) [TaxId: 9606]}	99.83
d2fn4a1		173	r-Ras {Human (Homo sapiens) [TaxId: 9606]}	99.83
d1yzqa1		164	Rab6 {Human (Homo sapiens) [TaxId: 9606]}	99.82
d1zd9a1		164	ADP-ribosylation factor {Human (Homo sapiens), ARL	99.82
d2a5ja1		173	Rab2b {Human (Homo sapiens) [TaxId: 9606]}	99.81
d2g6ba1		170	Rab26 {Human (Homo sapiens) [TaxId: 9606]}	99.81
d2gjsa1		168	Rad {Human (Homo sapiens) [TaxId: 9606]}	99.81
d1z0fa1		166	Rab14 {Human (Homo sapiens) [TaxId: 9606]}	99.81
d2f9la1		175	Rab11b {Human (Homo sapiens) [TaxId: 9606]}	99.81
d1u8za_		168	Ras-related protein RalA {Cotton-top tamarin (Sagu	99.81
d1m7ba_		179	RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}	99.81
d1x1ra1		169	Ras-related protein M-Ras (XRas) {Mouse (Mus muscu	99.81
d1z0ja1		167	Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}	99.81
d1r2qa_		170	Rab5a {Human (Homo sapiens) [TaxId: 9606]}	99.8
d1xtqa1		167	GTP-binding protein RheB {Human (Homo sapiens) [Ta	99.8
d1i2ma_		170	Ran {Human (Homo sapiens) [TaxId: 9606]}	99.8
d1ksha_		165	ADP-ribosylation factor {Mouse (Mus musculus), ARL	99.8
d2bmea1		174	Rab4a {Human (Homo sapiens) [TaxId: 9606]}	99.8
d1c1ya_		167	Rap1A {Human (Homo sapiens) [TaxId: 9606]}	99.79
d2erya1		171	r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}	99.79
d1kaoa_		167	Rap2a {Human (Homo sapiens) [TaxId: 9606]}	99.79
d2f7sa1		186	Rab27b {Human (Homo sapiens) [TaxId: 9606]}	99.79
d2fu5c1		173	Rab8a {Mouse (Mus musculus) [TaxId: 10090]}	99.79
d2erxa1		171	di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}	99.79
d2atva1		168	Ras-like estrogen-regulated growth inhibitor, RERG	99.79
d1x3sa1		177	Rab18 {Human (Homo sapiens) [TaxId: 9606]}	99.79
d1g16a_		166	Rab-related protein Sec4 {Baker's yeast (Saccharom	99.78
d1moza_		182	ADP-ribosylation factor {Baker's yeast (Saccharomy	99.78
d1ky3a_		175	Rab-related protein ypt7p {Baker's yeast (Saccharo	99.78
d1ctqa_		166	cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9	99.78
d1ek0a_		170	Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [T	99.77
d1fzqa_		176	ADP-ribosylation factor {Mouse (Mus musculus), ARL	99.77
d1vg8a_		184	Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}	99.77
d1wmsa_		174	Rab9a {Human (Homo sapiens) [TaxId: 9606]}	99.76
d1e0sa_		173	ADP-ribosylation factor {Human (Homo sapiens), ARF	99.75
d2astb2		284	Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa	99.74
d2omza2		384	Internalin A {Listeria monocytogenes [TaxId: 1639]	99.74
d2g3ya1		172	GTP-binding protein GEM {Human (Homo sapiens) [Tax	99.74
d1svsa1		195	Transducin (alpha subunit) {Rat (Rattus norvegicus	99.72
d1z06a1		165	Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}	99.72
d2bmja1		175	Centaurin gamma 1, G domain {Human (Homo sapiens)	99.71
d2astb2		284	Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa	99.71
d2bcjq2		200	Transducin (alpha subunit) {Mouse (Mus musculus) [	99.68
d2omza2		384	Internalin A {Listeria monocytogenes [TaxId: 1639]	99.68
d1pgva_		167	Tropomodulin C-terminal domain {nematode (Caenorha	99.64
d1r8sa_		160	ADP-ribosylation factor {Human (Homo sapiens), ARF	99.64
d1io0a_		166	Tropomodulin C-terminal domain {Chicken (Gallus ga	99.63
d1zcba2		200	Transducin (alpha subunit) {Mouse (Mus musculus) [	99.62
d1upta_		169	ADP-ribosylation factor {Human (Homo sapiens), ARL	99.61
d1zj6a1		177	ADP-ribosylation factor {Human (Homo sapiens), ARL	99.6
d2qtvb1		166	SAR1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	99.56
d1io0a_		166	Tropomodulin C-terminal domain {Chicken (Gallus ga	99.54
d1azta2		221	Transducin (alpha subunit) {Cow (Bos taurus) [TaxI	99.53
d1wf3a1		178	GTPase Era, N-terminal domain {Thermus thermophilu	99.5
d2fh5b1		207	Signal recognition particle receptor beta-subunit	99.47
d1f6ba_		186	SAR1 {Chinese hamster (Cricetulus griseus) [TaxId:	99.44
d1wb1a4		179	Elongation factor SelB, N-terminal domain {Methano	99.42
d1udxa2		180	Obg GTP-binding protein middle domain {Thermus the	99.39
d1xkua_		305	Decorin {Cow (Bos taurus) [TaxId: 9913]}	99.38
d1mkya1		171	Probable GTPase Der, N-terminal and middle domains	99.36
d1mkya2		186	Probable GTPase Der, N-terminal and middle domains	99.35
d1xkua_		305	Decorin {Cow (Bos taurus) [TaxId: 9913]}	99.32
d2gj8a1		161	Probable tRNA modification GTPase TrmE (MnmE), G d	99.29
d1g7sa4		227	Initiation factor IF2/eIF5b, N-terminal (G) domain	99.27
d1xzpa2		160	TrmE GTPase domain {Thermotoga maritima [TaxId: 23	99.25
d2cxxa1		184	GTP-binding protein engB {Pyrococcus horikoshii [T	99.2
d1ogqa_		313	Polygalacturonase inhibiting protein PGIP {Kidney	99.19
d1p9ag_		266	von Willebrand factor binding domain of glycoprote	99.17
d1h6ua2		227	Internalin H {Listeria monocytogenes [TaxId: 1639]	99.15
d1lnza2		185	Obg GTP-binding protein middle domain {Bacillus su	99.15
d1svia_		195	Probable GTPase EngB {Bacillus subtilis [TaxId: 14	99.14
d1h6ua2		227	Internalin H {Listeria monocytogenes [TaxId: 1639]	99.14
d1p9ag_		266	von Willebrand factor binding domain of glycoprote	99.13
d1ogqa_		313	Polygalacturonase inhibiting protein PGIP {Kidney	99.12
d1nrjb_		209	Signal recognition particle receptor beta-subunit	99.12
d1ozna_		284	Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma	99.11
d1h6ta2		210	Internalin B {Listeria monocytogenes [TaxId: 1639]	99.09
d1kk1a3		195	Initiation factor eIF2 gamma subunit, N-terminal (	99.09
d1ozna_		284	Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma	99.06
d2qn6a3		205	Initiation factor eIF2 gamma subunit, N-terminal (	99.05
d2omxa2		199	Internalin B {Listeria monocytogenes [TaxId: 1639]	98.99
d2omxa2		199	Internalin B {Listeria monocytogenes [TaxId: 1639]	98.98
d1egaa1		179	GTPase Era, N-terminal domain {Escherichia coli [T	98.89
d2c78a3		204	Elongation factor Tu (EF-Tu), N-terminal (G) domai	98.88
d1puia_		188	Probable GTPase EngB {Escherichia coli [TaxId: 562	98.86
d1tq4a_		400	Interferon-inducible GTPase {Mouse (Mus musculus)	98.86
d1jl5a_		353	Leucine rich effector protein YopM {Yersinia pesti	98.82
d1d2ea3		196	Elongation factor Tu (EF-Tu), N-terminal (G) domai	98.79
d1zunb3		222	Sulfate adenylate transferase subunit cysN/C, EF-T	98.7
d1jl5a_		353	Leucine rich effector protein YopM {Yersinia pesti	98.68
d1h65a_		257	Chloroplast protein translocon GTPase Toc34 {Garde	98.68
d1a9na_		162	Splicesomal U2A' protein {Human (Homo sapiens) [Ta	98.6
d1m9la_		198	Outer arm dynein light chain 1 {Green algae (Chlam	98.49
d2bv3a2		276	Elongation factor G (EF-G), N-terminal (G) domain	98.44
d1dcea3		124	Rab geranylgeranyltransferase alpha-subunit, C-ter	98.39
d1yrba1		244	ATP(GTP)-binding protein PAB0955 {Pyrococcus abyss	98.39
d1f60a3		239	Elongation factor eEF-1alpha, N-terminal (G) domai	98.38
d2dy1a2		267	Elongation factor G (EF-G), N-terminal (G) domain	98.32
d1a9na_		162	Splicesomal U2A' protein {Human (Homo sapiens) [Ta	98.31
d1r5ba3		245	Eukaryotic peptide chain release factor ERF2, G do	98.28
d1w8aa_		192	Slit {Fruit fly (Drosophila melanogaster) [TaxId:	98.24
d1jnya3		224	Elongation factor eEF-1alpha, N-terminal (G) domai	98.21
d1w8aa_		192	Slit {Fruit fly (Drosophila melanogaster) [TaxId:	98.14
d1n0ua2		341	Elongation factor 2 (eEF-2), N-terminal (G) domain	98.05
d1xwdc1		242	Follicle-stimulating hormone receptor {Human (Homo	97.72
d2qm8a1		323	Metallochaperone MeaB {Methylobacterium extorquens	97.67
d1koha1		162	mRNA export factor tap {Human (Homo sapiens) [TaxI	97.66
d2akab1		299	Dynamin G domain {Rat (Rattus norvegicus) [TaxId:	97.61
d1xwdc1		242	Follicle-stimulating hormone receptor {Human (Homo	97.59
d2p67a1		327	LAO/AO transport system kinase ArgK {Escherichia c	97.46
d1koha1		162	mRNA export factor tap {Human (Homo sapiens) [TaxI	97.44
d2ifga3		156	High affinity nerve growth factor receptor, N-term	97.27
d1jwyb_		306	Dynamin G domain {Dictyostelium discoideum [TaxId:	97.06
d1wxqa1		319	GTP-binding protein PH0525 {Pyrococcus horikoshii	96.16
d1puja_		273	Probable GTPase YlqF {Bacillus subtilis [TaxId: 14	95.62
d1gkya_		186	Guanylate kinase {Baker's yeast (Saccharomyces cer	95.45
d1jala1		278	YchF GTP-binding protein N-terminal domain {Haemop	94.6
d1s96a_		205	Guanylate kinase {Escherichia coli [TaxId: 562]}	94.32
d1kgda_		178	Guanylate kinase-like domain of Cask {Human (Homo	94.17
d1u0la2		225	Probable GTPase EngC (YjeQ), C-terminal domain {Th	93.95
d1ye8a1		178	Hypothetical kinase-like protein Aq_1292 {Aquifex	93.22
d1y63a_		174	Probable kinase LmjF30.1890 {Leishmania major [Tax	92.66
d1znwa1		182	Guanylate kinase {Mycobacterium tuberculosis [TaxI	92.49
d1lw7a2		192	Transcriptional regulator NadR, ribosylnicotinamid	91.86
d1t9ha2		231	Probable GTPase EngC (YjeQ), C-terminal domain {Ba	90.86
d1rkba_		173	Adenylate kinase {Human (Homo sapiens), isoenzyme	90.71
d1ni3a1		296	YchF GTP-binding protein N-terminal domain {Fissio	89.68
d1ak2a1		190	Adenylate kinase {Cow (Bos taurus), mitochondrial	89.46
d1xjca_		165	Molybdopterin-guanine dinucleotide biosynthesis pr	89.06
d1lvga_		190	Guanylate kinase {Mouse (Mus musculus) [TaxId: 100	88.94
d2ak3a1		189	Adenylate kinase {Cow (Bos taurus), mitochondrial	88.77
d1zaka1		189	Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}	88.46
d1zina1		182	Adenylate kinase {Bacillus stearothermophilus [Tax	88.45
d1ly1a_		152	Polynucleotide kinase, kinase domain {Bacteriophag	88.44
d1akya1		180	Adenylate kinase {Baker's yeast (Saccharomyces cer	88.4
d2cdna1		181	Adenylate kinase {Mycobacterium tuberculosis [TaxI	88.29
d1s3ga1		182	Adenylate kinase {Bacillus globisporus [TaxId: 145	88.27
d1e4va1		179	Adenylate kinase {Escherichia coli [TaxId: 562]}	87.44
d1np6a_		170	Molybdopterin-guanine dinucleotide biosynthesis pr	87.42
d1yj5a2		172	5' polynucleotide kinase-3' phosphatase, C-termina	87.24
d1gvnb_		273	Plasmid maintenance system epsilon/zeta, toxin zet	86.71
d1puja_		273	Probable GTPase YlqF {Bacillus subtilis [TaxId: 14	86.7
d1ixsb2		239	Holliday junction helicase RuvB {Thermus thermophi	86.59
d2bdta1		176	Hypothetical protein BH3686 {Bacillus halodurans [	86.54
d1in4a2		238	Holliday junction helicase RuvB {Thermotoga mariti	86.27
d1ofha_		309	HslU {Haemophilus influenzae [TaxId: 727]}	86.0
d1kaga_		169	Shikimate kinase (AroK) {Escherichia coli [TaxId:	85.8
d2pmka1		241	Haemolysin B ATP-binding protein {Escherichia coli	85.69
d1qf9a_		194	UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4	85.67
d1mv5a_		242	Multidrug resistance ABC transporter LmrA, C-termi	85.58
d1u0la2		225	Probable GTPase EngC (YjeQ), C-terminal domain {Th	85.47
d1f5na2		277	Interferon-induced guanylate-binding protein 1 (GB	85.44
d1r6bx2		268	ClpA, an Hsp100 chaperone, AAA+ modules {Escherich	85.31
d2qy9a2		211	GTPase domain of the signal recognition particle r	85.17
d1bifa1		213	6-phosphofructo-2-kinase/fructose-2,6-bisphosphata	84.79
d1r0wa_		281	Cystic fibrosis transmembrane conductance regulato	84.59
d1jj7a_		251	Peptide transporter Tap1, C-terminal ABC domain {H	84.22
d2i3ba1		189	Cancer-related NTPase, C1orf57 {Human (Homo sapien	84.1
d1nija1		222	Hypothetical protein YjiA, N-terminal domain {Esch	83.8
d1jbka_		195	ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}	83.74
d1sxja2		253	Replication factor C1 {Baker's yeast (Saccharomyce	83.73
d2iyva1		165	Shikimate kinase (AroK) {Mycobacterium tuberculosi	83.56
d1okkd2		207	GTPase domain of the signal recognition particle r	83.25
d3b60a1		253	Multidrug resistance ABC transporter MsbA, C-termi	83.08
d1x6va3		195	Adenosine-5'phosphosulfate kinase (APS kinase) {Hu	83.02
d1knqa_		171	Gluconate kinase {Escherichia coli [TaxId: 562]}	83.0
d1teva_		194	UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]	82.87
d1l2ta_		230	MJ0796 {Archaeon Methanococcus jannaschii [TaxId:	82.73
d1ukza_		196	Uridylate kinase {Baker's yeast (Saccharomyces cer	82.64
d1sgwa_		200	Putative ABC transporter PF0895 {Pyrococcus furios	82.5
d2onka1		240	Molybdate/tungstate import ATP-binding protein Wtp	82.46
d1m8pa3		183	ATP sulfurylase C-terminal domain {Fungus (Penicil	82.42
d1qhxa_		178	Chloramphenicol phosphotransferase {Streptomyces v	82.29
d1iqpa2		231	Replication factor C {Archaeon Pyrococcus furiosus	82.19
d1t9ha2		231	Probable GTPase EngC (YjeQ), C-terminal domain {Ba	82.06
d1nksa_		194	Adenylate kinase {Archaeon Sulfolobus acidocaldari	82.0
d2awna2		232	Maltose transport protein MalK, N-terminal domain	81.9
d1v43a3		239	Hypothetical protein PH0022, N-terminal domain {Py	81.63
d1khta_		190	Adenylate kinase {Archaeon Methanococcus voltae [T	81.63
d1rz3a_		198	Hypothetical protein rbstp0775 {Bacillus stearothe	81.32
d1d2na_		246	Hexamerization domain of N-ethylmalemide-sensitive	81.15
d1w5sa2		287	CDC6-like protein APE0152, N-terminal domain {Aero	80.99
d3dhwc1		240	Methionine import ATP-binding protein MetN {Escher	80.8
d1g6oa_		323	Hexameric traffic ATPase, HP0525 {Helicobacter pyl	80.67
d1zp6a1		176	Hypothetical protein Atu3015 {Agrobacterium tumefa	80.67
d1fnna2		276	CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T	80.61
d3d31a2		229	Sulfate/molybdate ABC transporter, ATP-binding pro	80.49
d1ji0a_		240	Branched chain aminoacid ABC transporter {Thermoto	80.26
d1g2912		240	Maltose transport protein MalK, N-terminal domain	80.15

>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: RNI-like
family: 28-residue LRR
domain: Ribonuclease inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-36  Score=257.36  Aligned_cols=387  Identities=16%  Similarity=0.207  Sum_probs=302.5

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHC-CCCCCEEEEECCCCCHHHHHHHHH
Q ss_conf             9853999735999999999999996069982199981179999889999999671-999349994158999889999999
Q 000665           74 TSLKHLEFHSVEWEIEQMRILGLLLDCSSNVKQVVFRRNKFDAECLAEISDVVRR-NGVIKEVMFTESGIKNAGASLLAS  152 (1363)
Q Consensus        74 ~~L~~L~Ls~~~l~~~~~~~L~~~L~~~~~L~~L~Ls~N~i~~~~~~~l~~~L~~-~~~L~~L~Ls~n~I~~~g~~~L~~  152 (1363)
                      +.++.|+|++|.++++++..|+.++..+++|+.|+|++|.|++.++..++..++. +.+|+.|+|++|.+++.++..++.
T Consensus        27 ~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~  106 (460)
T d1z7xw1          27 QQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSS  106 (460)
T ss_dssp             TTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCC
T ss_conf             79999982899998899999999985399988897959859728999999998437887788778887754322101211


Q ss_pred             HHCCCCCCCEEECCCCCCCHHHHHHHHHHHHC-CCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCEEEECCCCCCCCH--
Q ss_conf             84059994589816998993459999999760-99835999169999-781899999998299740998359989542--
Q 000665          153 ALKVNDTLEELQIWEDSIGSKGAEELSKMIEA-NSTLKSLTIFDSSS-LTATPLISAVLARNRAMEVHVWSGENGEKS--  228 (1363)
Q Consensus       153 ~L~~~~~L~~L~Ls~N~I~~~g~~~L~~~L~~-~~~L~~L~Ls~n~~-~~~~~~l~~~l~~~~~L~~L~Lsgn~~~~~--  228 (1363)
                      ++..+++|++|++++|.+++.+...+...+.. ......+....... ..+...+...+..+..++.++++++.....  
T Consensus       107 ~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ls~~~~~~~~~  186 (460)
T d1z7xw1         107 TLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGV  186 (460)
T ss_dssp             HTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHH
T ss_pred             HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             00003432002444332023455554430135543332222223222001100112223333222223322221245555


Q ss_pred             HHHHHHCC-CCCCCEEEC-----CCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHH-HHCCCCCEEECCCCC
Q ss_conf             57872158-897510413-----59110899997744999515998259989969899999998-518986699736999
Q 000665          229 SKVVEFLP-ENGTLRIYR-----LDVSGSCRVACSLGCNTTVKSLDMTGVRLKSRWAKEFRWVL-QQNQSLKEVILSKTC  301 (1363)
Q Consensus       229 ~~l~~~l~-~~~~L~~l~-----Ls~~g~~~L~~~L~~~~~L~~LdLs~N~L~~~~~~~L~~~L-~~~~~L~~LdLs~N~  301 (1363)
                      ..+...+. .......+.     +...+...+...+..+..++.++++.|.+.+.+........ ....+++.+++++|.
T Consensus       187 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~  266 (460)
T d1z7xw1         187 RVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECG  266 (460)
T ss_dssp             HHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
T ss_conf             43234332112210012411245421011012233222222100100211223344201100011111110000134543


Q ss_pred             CCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCC
Q ss_conf             99389999999986099977998169988976399999664201222236898500999617998899878999997102
Q 000665          302 LKDKGVVYVAAGLFKNRSLESLYLHGNWFSGVGVEHLLCPLSRFSSLQSQANITLRSVTFGGGRTKIGRDGIAAILQMLT  381 (1363)
Q Consensus       302 L~~~g~~~L~~~L~~~~~L~~LdLs~N~l~~~g~~~L~~~L~~~~aL~~~~~~~L~~L~Lsg~~N~i~~~~~~~L~~~L~  381 (1363)
                      +.......++..+..++.++.+++++|.+++.+...++..+.       ..++.|+.++++  .|.++..++..++..+.
T Consensus       267 i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~-------~~~~~L~~l~l~--~~~l~~~~~~~l~~~~~  337 (460)
T d1z7xw1         267 ITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLL-------EPGCQLESLWVK--SCSFTAACCSHFSSVLA  337 (460)
T ss_dssp             CCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHT-------STTCCCCEEECT--TSCCBGGGHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC-------CCCCCCCCCCCC--CCCHHHHHHHHCCCCCC
T ss_conf             321233433221112343334444433322456421110123-------334443333233--34102334432133221


Q ss_pred             CCCCEEEEEECCCCCCCHHHHHHHHHHHHH-CCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
Q ss_conf             486137997269999997889999999962-7995689841677878966899999997219985687435889999886
Q 000665          382 TNETVTQLGIYDDQSLRPDDFVRIFKSLQK-NASLRQLSLQGCKGVRGELVQQAIMETLQVNPWIEDIDLERTPLKNSGK  460 (1363)
Q Consensus       382 ~~~~L~~L~Ls~N~~l~~~gl~~L~~~L~~-~~~L~~L~Ls~N~~~i~~~~l~~L~~~L~~n~~L~~LdL~~N~l~~~g~  460 (1363)
                      .+++|++|+|++| .++++|+..+++.+.. ++.|+.|+|++|.  +++.++..|++.+..+++|++|+|++|+|++.| 
T Consensus       338 ~~~~L~~L~Ls~N-~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~--i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g-  413 (460)
T d1z7xw1         338 QNRFLLELQISNN-RLEDAGVRELCQGLGQPGSVLRVLWLADCD--VSDSSCSSLAATLLANHSLRELDLSNNCLGDAG-  413 (460)
T ss_dssp             HCSSCCEEECCSS-BCHHHHHHHHHHHHTSTTCCCCEEECTTSC--CCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHH-
T ss_pred             CCCCHHHHHEEEE-CCCCCCCCHHHHHHHCCCCCCCEEECCCCC--CCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHH-
T ss_conf             1011113201210-135766400111220456777889897997--975999999999962998898989999698799-


Q ss_pred             HHHHHHHHHCCCC
Q ss_conf             6789999821499
Q 000665          461 ADGIYQRLGQKGR  473 (1363)
Q Consensus       461 ~~~i~~~l~~~~~  473 (1363)
                      ...+.+.+..+..
T Consensus       414 ~~~l~~~l~~~~~  426 (460)
T d1z7xw1         414 ILQLVESVRQPGC  426 (460)
T ss_dssp             HHHHHHHHTSTTC
T ss_pred             HHHHHHHHHHCCC
T ss_conf             9999999974788

PyMOL of d1z7xw1

>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}	Back information, alignment and structure

>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}	Back information, alignment and structure

>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}	Back information, alignment and structure

>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}	Back information, alignment and structure

>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}	Back information, alignment and structure

>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}	Back information, alignment and structure

>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}	Back information, alignment and structure

>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}	Back information, alignment and structure

>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}	Back information, alignment and structure

>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}	Back information, alignment and structure

>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}	Back information, alignment and structure

>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}	Back information, alignment and structure

>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}	Back information, alignment and structure

>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}	Back information, alignment and structure

>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}	Back information, alignment and structure

>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}	Back information, alignment and structure

>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}	Back information, alignment and structure

>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}	Back information, alignment and structure

>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}	Back information, alignment and structure

>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}	Back information, alignment and structure

>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}	Back information, alignment and structure

>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}	Back information, alignment and structure

>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}	Back information, alignment and structure

>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}	Back information, alignment and structure

>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}	Back information, alignment and structure

>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}	Back information, alignment and structure

>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}	Back information, alignment and structure

>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}	Back information, alignment and structure

>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}	Back information, alignment and structure

>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}	Back information, alignment and structure

>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}	Back information, alignment and structure

>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}	Back information, alignment and structure

>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}	Back information, alignment and structure

>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}	Back information, alignment and structure

>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}	Back information, alignment and structure

>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}	Back information, alignment and structure

>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}	Back information, alignment and structure

>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}	Back information, alignment and structure

>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}	Back information, alignment and structure

>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}	Back information, alignment and structure

>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}	Back information, alignment and structure

>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}	Back information, alignment and structure

>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}	Back information, alignment and structure

>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}	Back information, alignment and structure

>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}	Back information, alignment and structure

>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}	Back information, alignment and structure

>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}	Back information, alignment and structure

>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}	Back information, alignment and structure

>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}	Back information, alignment and structure

>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}	Back information, alignment and structure

>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}	Back information, alignment and structure

>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}	Back information, alignment and structure

>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}	Back information, alignment and structure

>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}	Back information, alignment and structure

>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}	Back information, alignment and structure

>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}	Back information, alignment and structure

>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}	Back information, alignment and structure

>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}	Back information, alignment and structure

>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}	Back information, alignment and structure

>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}	Back information, alignment and structure

>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}	Back information, alignment and structure

>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure

>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}	Back information, alignment and structure

>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}	Back information, alignment and structure

>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}	Back information, alignment and structure

>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}	Back information, alignment and structure

>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}	Back information, alignment and structure

>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}	Back information, alignment and structure

>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}	Back information, alignment and structure

>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}	Back information, alignment and structure

>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}	Back information, alignment and structure

>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}	Back information, alignment and structure

>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}	Back information, alignment and structure

>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}	Back information, alignment and structure

>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}	Back information, alignment and structure

>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}	Back information, alignment and structure

>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}	Back information, alignment and structure

>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}	Back information, alignment and structure

>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}	Back information, alignment and structure

>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}	Back information, alignment and structure