Citrus Sinensis ID: 000910

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------123

MGHKKKNTAPRSKQSPAAAVEAEPCATPDATSNQTNTEPSEADVVVGGGGASTYGAIKLECERALTALRRGNHKKALRLMKELSSRHENSAYVALIHRVQGTVCVKVASIIDDLNSKQRHLKNAIESAKKAAELSPHSVEFAHFYANLLYEAANDGKEYEEVVQECERALAIENPIDPAKESLQDESQQKILTADARIAHVQSELRSLIQKSNIASISTWMKNLGTGEEKFRLIPIRRVAEDPMEVRLVQARRPNEIKKATKTPEERRKEIEVRVAAARLLQQKSETGQLYQNNEGERNVDSGSGGLEKRERERRKHGSNLRRNRSKEERRDFVRSYWNSMSLEMKRELLKVKVCDIKAHSASLKDGLASDVLAEALAFAEENKTWRFWVCCRCNEKFADSESHMHHVVQQHMGNLLPKMQAVLPQSVDNEWNEMIDNCSWKPLDIVAAVKMLGRDKTKSRDTEVSEDFYSGNHIEECDDCFKDALDSSPEKENLGHSYNSSSVEGNDCEKVVSIQCRECDGNQVSAVYPLIDSWPVADDTERVKLLERIHALFELLLRHKCLSASHLSKVIQYTMDELQSLASGSLLLNHGVGQTPMCICFLGVHQLRKIVKFLQELSHACSLGRYSERINSIDDANSVSPSLEIKETIVLNGDASCLLLDERLLSTELISGDAFIDNVTSANIRHENGVAEDADALLTWIFAGPSSGEHLTTWMHSKEEKTHQGMEILQTLEKEFYHLQSLCERKCEHLSYEEALQALEDLCLEEGKKRETVAEFGHRSYESVLRKRREELLESENDMFISSRFESDAILNVLKEAEALNVNQFGYEDTYSGMTSQLCDLESGEDDDWRNKDCLHQVDTCIEVAIQRQKEQLSVELSKIDARIMRNVTSMQQLELKLEPVSAYDYQSILLPLVQSYLRAHLEDLAEKDATEKSDAAREAFLAELALDSKKVARGGSDISKHTNDKTKEKRKHKEYRKTKDSKPVGGNERHIVHDKTADLVSFPVESDGDNPDSETVVSANGDDLKLQEEEFRRKIELEAEERKLEETLAYQRRIENEAKLKHLAEQSKKSAQIFGENVAEGVCDTYLGHGSNDLDMHKSMRLSSPVQLVSKDEFPHNFEGTPVNTANGAAVPIRSSPTSSFQNINTAHHLSIKQGLPNGETPEDGFLPTDRRTGRRGRRHRSSNRSQDWKNQALSSEKENIGVRSDDSHLTGAGKPYALVMFYALLV

cccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHccccccccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHccccccccccHHHHHHHHHHHHcccccHHHHHccEEEEHHHHHHHHHHccccHHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHHHHcccccHHHHHHccccccHHHHHHHcccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccccccEEEccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEccccccHHHHHHcccccccccccccccccccccccccccccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccccHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcc

ccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHEEEEHcEEEEEEHHHHccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccHHHHccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccccHccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccHccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccEEEEEccccccccccHHHHHHHHHHHHHHHccHcHHHHccccccHHHHHHHHccccccHcHHHHHHHHHHHHHHHccHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHccccccccccEEEEccHHHHHHHHHHHHHHHHHcccccccccEcccccccccccccEEEEEEEccccccHHHHcHHHHccccccccccccccccEEcccccccccccccHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccccccHHHccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccHccEcccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHcccccccEEEEccccccccccccccccccEEEEccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEcccccEccccccHHHHHHHHHHHc

mghkkkntaprskqspaaaveaepcatpdatsnqtntepseadvvvggggastYGAIKLECERALTALRRGNHKKALRLMKELSSRHENSAYVALIHRVQGTVCVKVASIIDDLNSKQRHLKNAIESAKKAAELSPHSVEFAHFYANLLYEAANDGKEYEEVVQECERALAienpidpakeslqdESQQKILTADARIAHVQSELRSLIQKSNIASISTWMKNlgtgeekfrlipirrvaedpmEVRLVQarrpneikkatktpEERRKEIEVRVAAARLLQQKsetgqlyqnnegernvdsgsgglekrERERRKHgsnlrrnrskeeRRDFVRSYWNSMSLEMKRELLKVKVCDikahsaslkdglASDVLAEALAFAEENKTWRFWVCcrcnekfadseshMHHVVQQHMGNLLPKmqavlpqsvdnewnemidncswkpLDIVAAVKMLgrdktksrdtevsedfysgnhieecDDCFKdaldsspekenlghsynsssvegndcekVVSIQcrecdgnqvsavyplidswpvaddTERVKLLERIHALFELLLRHKCLSASHLSKVIQYTMDELQSLasgslllnhgvgqtpmciCFLGVHQLRKIVKFLQELSHAcslgryserinsiddansvspsleiketivlnGDASCLLLDERLLstelisgdafidnvtsanirhengvaedADALLTWIfagpssgehltTWMHSKEEKTHQGMEILQTLEKEFYHLQSLCERKCEHLSYEEALQALEDLCLEEGKKRETVAEFGHRSYESVLRKRREELLESendmfissrfeSDAILNVLKEAEAlnvnqfgyedtysgmtsqlcdlesgedddwrnkdclhQVDTCIEVAIQRQKEQLSVELSKIDARIMRNVTSMQQLElklepvsaydyqSILLPLVQSYLRAHLEDLAEKDATEKSDAAREAFLAELALDSkkvarggsdiskhtndktkekrkhkeyrktkdskpvggnerhivhdktadlvsfpvesdgdnpdsetvvsangddlkLQEEEFRRKIELEAEERKLEETLAYQRRIENEAKLKHLAEQSKKSAQIFGENVAegvcdtylghgsndldmhksmrlsspvqlvskdefphnfegtpvntangaavpirssptssfqnintAHHLsikqglpngetpedgflptdrrtgrrgrrhrssnrsqdwKNQALssekenigvrsddshltgagkPYALVMFYALLV

mghkkkntaprskqspaaaveaePCATpdatsnqtntepseadvvVGGGGASTYGAIKLECERALTALRRGNHKKALRLMKELSSRHENSAYVALIHRVQGTVCVKVASIIDDLNSKQRHLKNAIESAKKAAELSPHSVEFAHFYANLLYEAANDGKEYEEVVQECERALAIENPIDPAKESLQDESQQKILTADARIAHVQSELRSLIQKSNIASISTWMknlgtgeekfrlipirrvaedpmevrlvqarrpneikkatktpeerrkEIEVRVAAARLLQqksetgqlyqnnegernvdsgsgglekrererrkhgsnlrrnrskeerrdfVRSYWNSMSLEMKRELLKVKVCDIKAHsaslkdglasDVLAEALAFAEENKTWRFWVCCRCNEKFADSESHMHHVVQQHMGNLLPKMQAVLPQSVDNEWNEMIDNCSWKPLDIVAAVKMLgrdktksrdtevsedfysgnhieECDDCFKDALDSSPEKENLGhsynsssvegndCEKVVSIQCRECDGNQVSAVYPLIDSWPVADDTERVKLLERIHALFELLLRHKCLSASHLSKVIQYTMDELQSLASGSLLLNHGVGQTPMCICFLGVHQLRKIVKFLQELSHACSLGRYSERINSIDDANSVSPSLEIKETIVLNGDASCLLLDERLLSTELISGDAFIDNVTSANIRHENGVAEDADALLTWIFAGPSSGEHLTTWMHSKEEKTHQGMEILQTLEKEFYHLQSLCERKCEHLSYEEALQALEDLCLEEGKKretvaefghrsyesvLRKRREELLEsendmfissrFESDAILNVLKEAEALNVNQFGYEDTYSGMTSQLCDLESGEDDDWRNKDCLHQVDTCIEVAIQRQKEQLSVELSKIDARIMRNVTSMQQLELKLEPVSAYDYQSILLPLVQSYLRAHLEDLAEKDATEKSDAAREAFLAELaldskkvarggsdiskhtndktkekrkhkeyrktkdskpvggnerhivhdKTADLVSfpvesdgdnpdsetvvsangddlklqEEEFRRKIeleaeerkleetLAYQRRIENEAKLKHLAEQSKKSAQIFGENVAEGVCDTYLGHGSNDLDMHKSMRLSSPVQLVSKDEFPHNFEGTPVNTANGAAVPIRSSPTSSFQNINTAHHLsikqglpngetpedgflptdrrtgrrgrrhrssnrsqdwknqalssekenigvrsddshltgagkpyALVMFYALLV

MGHKKKNTAPRSKQSPAAAVEAEPCATPDATSNQTNTEPSEADVVVGGGGASTYGAIKLECERALTALRRGNHKKALRLMKELSSRHENSAYVALIHRVQGTVCVKVASIIDDLNSKQRHLKNAIESAKKAAELSPHSVEFAHFYANLLYEAANDGKEYEEVVQECERALAIENPIDPAKESLQDESQQKILTADARIAHVQSELRSLIQKSNIASISTWMKNLGTGEEKFRLIPIRRVAEDPMEVRLVQARRPNEIKKATKTPEERRKEIEVRVAAARLLQQKSETGQLYQNNEGERNVDSGSGGLekrererrkHGSNLRRNRSKEERRDFVRSYWNSMSLEMKRELLKVKVCDIKAHSASLKDGLASDVLAEALAFAEENKTWRFWVCCRCNEKFADSESHMHHVVQQHMGNLLPKMQAVLPQSVDNEWNEMIDNCSWKPLDIVAAVKMLGRDKTKSRDTEVSEDFYSGNHIEECDDCFKDALDSSPEKENLGHSYNSSSVEGNDCEKVVSIQCRECDGNQVSAVYPLIDSWPVADDTERVKLLERIHALFELLLRHKCLSASHLSKVIQYTMDELQSLASGSLLLNHGVGQTPMCICFLGVHQLRKIVKFLQELSHACSLGRYSERINSIDDANSVSPSLEIKETIVLNGDASClllderllstelISGDAFIDNVTSANIRHENGVAEDADALLTWIFAGPSSGEHLTTWMHSKEEKTHQGMEILQTLEKEFYHLQSLCERKCEHLSYEEALQALEDLCLEEGKKRETVAEFGHRSYESVlrkrreelleSENDMFISSRFESDAILNVLKEAEALNVNQFGYEDTYSGMTSQLCDLESGEDDDWRNKDCLHQVDTCIEVAIQRQKEQLSVELSKIDARIMRNVTSMQQLELKLEPVSAYDYQSILLPLVQSYLRAHLEDLAEKDATEKSDaareaflaelalDSKKVARGGSDISKHTNDKTKEKRKHKEYRKTKDSKPVGGNERHIVHDKTADLVSFPVESDGDNPDSETVVSANGDDLKLQEEEFrrkieleaeerkleetlaYQRRIENEAKLKHLAEQSKKSAQIFGENVAEGVCDTYLGHGSNDLDMHKSMRLSSPVQLVSKDEFPHNFEGTPVNTANGAAVPIRSSPTSSFQNINTAHHLSIKQGLPNGETPEDGFLPTDrrtgrrgrrhrssnrsQDWKNQALSSEKENIGVRSDDSHLTGAGKPYALVMFYALLV

*******************************************VVVGGGGASTYGAIKLECERALTALRRGNHKKALRLM*******ENSAYVALIHRVQGTVCVKVASIIDDLN*********************HSVEFAHFYANLLYEAANDGKEYEEVVQECERALAI********************TADARIAHVQSELRSLIQKSNIASISTWMKNLGTGEEKFRLIPIRRVAE*******************************************************************************************FVRSYWNSMSLEMKRELLKVKVCDIKAHSASLKDGLASDVLAEALAFAEENKTWRFWVCCRCNEKFADSESHMHHVVQQHMGNLLPKMQAVLPQSVDNEWNEMIDNCSWKPLDIVAAVKMLG**************FYSGNHIEECDDCF**************************CEKVVSIQCRECDGNQVSAVYPLIDSWPVADDTERVKLLERIHALFELLLRHKCLSASHLSKVIQYTMDELQSLASGSLLLNHGVGQTPMCICFLGVHQLRKIVKFLQELSHACSLGRYSERINSIDDANSVSPSLEIKETIVLNGDASCLLLDERLLSTELISGDAFIDNVTSANIRHENGVAEDADALLTWIF************************EILQTLEKEFYHLQSLCERKCEHLSYEEALQALEDLCLEEG*****VAEF**********************MFISSRFESDAILNVLKEAEALNVNQFGYEDTYS********************DCLHQVDTCIEVAIQRQKEQLSVELSKIDARIMRNVTSMQQLELKLEPVSAYDYQSILLPLVQSYLRAHLED*****************************************************************************************************************************************************IFGENVAEGVCDTYLGH***************************************************************************************************************************AGKPYALVMFYALL*

********************************************************IKLECERALTALR*********************AYVALIHRVQGTVCVKVASI****NSKQRHLKNAIESAKKAAELSPHSVEFAHFYANLLYEAANDGKEYEEVVQECERALAIENPIDPAKESLQDESQQKILTADARIAHVQSELRSLIQKSNIASISTWMKNLGTGEEKFRLIPIRRVAEDPME**********************************************************************************EERRDFVRSYWNSMSLEMKRELLKVKVCDIKAHSASLKDGLASDVLAEALAFAEENKTWRFWVCCRCNEKFADSESHMHHVVQQH******************EWNEMIDNCSWKPLDIVAAVKMLGRDKTKSRDTEVSEDFYSGNHIEECDDCFKD*************SYNSSSVEGNDCEKVVSIQCRECDGNQVSAVYPLIDSWPVADDTERVKLLERIHALFELLLRHKCLSASHLSKVIQYTMDELQSLASGSLLLNHGVGQTPMCICFLGVHQLRKIVKFLQELSHACSLGRYSERINSIDDANSVSPSLEIKETIVLNGDASCLLLDERLLSTELISGDAFIDNVTSANIRHENGVAEDADALLTWIFAGPSSGEHLTTWMHSKEEKTHQGMEILQTLEKEFYHLQSLCERKCEHLSYEEALQALEDLCLEEG************SYESVLRKRRE******NDMFISSRFESDAILNVLKEAEALNVNQFGYEDTYSGMTS***********DWRNKDCLHQVDTCIEVAIQRQKEQLSVELSKIDARIMRNVTSMQQLELKLEPVSAYDYQSILLPLVQSYLRAHLEDL**************************************************************************************************************************************************************CDTYLGHG*********************************************************************************************************************SHLTGAGKPYALVMFYALLV

*****************************************ADVVVGGGGASTYGAIKLECERALTALRRGNHKKALRLMKELSSRHENSAYVALIHRVQGTVCVKVASIIDDLNSKQRHLKNAIESAKKAAELSPHSVEFAHFYANLLYEAANDGKEYEEVVQECERALAIENPIDPAKESLQDESQQKILTADARIAHVQSELRSLIQKSNIASISTWMKNLGTGEEKFRLIPIRRVAEDPMEVRLVQARRPNEIKKATKTPEERRKEIEVRVAAARLLQQKSETGQLYQNNEG***********************************DFVRSYWNSMSLEMKRELLKVKVCDIKAHSASLKDGLASDVLAEALAFAEENKTWRFWVCCRCNEKFADSESHMHHVVQQHMGNLLPKMQAVLPQSVDNEWNEMIDNCSWKPLDIVAAVKMLGR***********EDFYSGNHIEECDDCFKDALDSSPEKENLGHSYNSSSVEGNDCEKVVSIQCRECDGNQVSAVYPLIDSWPVADDTERVKLLERIHALFELLLRHKCLSASHLSKVIQYTMDELQSLASGSLLLNHGVGQTPMCICFLGVHQLRKIVKFLQELSHACSLGRYSERINSIDDANSVSPSLEIKETIVLNGDASCLLLDERLLSTELISGDAFIDNVTSANIRHENGVAEDADALLTWIFAGPSSGEHLTTWMHSKEEKTHQGMEILQTLEKEFYHLQSLCERKCEHLSYEEALQALEDLCLEEGKKRETVAEFGHRSYESVLRKRREELLESENDMFISSRFESDAILNVLKEAEALNVNQFGYEDTYSGMTSQLCDLESGEDDDWRNKDCLHQVDTCIEVAIQRQKEQLSVELSKIDARIMRNVTSMQQLELKLEPVSAYDYQSILLPLVQSYLRAHLEDLAEKDATEKSDAAREAFLAELALDSKKV**********************************GNERHIVHDKTADLVSFPVESDGDNPDSETVVSANGDDLKLQEEEFRRKIELEAEERKLEETLAYQRRIENEAKLKHLAEQSKKSAQIFGENVAEGVCDTYLGHGSNDLDMHKSMRLSSPVQLVSKDEFPHNFEGTPVNTANGAAVPIRSSPTSSFQNINTAHHLSIKQGLPNGETPEDGFLPTDR*************************************HLTGAGKPYALVMFYALLV

****************************************EADVVVGGGGASTYGAIKLECERALTALRRGNHKKALRLMKELSSRHENSAYVALIHRVQGTVCVKVASIIDDLNSKQRHLKNAIESAKKAAELSPHSVEFAHFYANLLYEAANDGKEYEEVVQECERALAIENPIDPAKESLQDESQQKILTADARIAHVQSELRSLIQKSNIASISTWMKNLGTGEEKFRLIPIRRVAEDPMEVRLVQARRPNEIKKATKTPEERRKEIEVRVAAARLLQQKS******************************************EERRDFVRSYWNSMSLEMKRELLKVKVCDIKAHSASLKDGLASDVLAEALAFAEENKTWRFWVCCRCNEKFADSESHMHHVVQQHMGNLLPKMQAVLPQSVDNEWNEMIDNCSWKPLDIVAAVKMLGRDKTKSRDTEVSEDFYSGNHIEECDDCFKDALDSSPEKENLGHSYNSSSVEGNDCEKVVSIQCRECDGNQVSAVYPLIDSWPVADDTERVKLLERIHALFELLLRHKCLSASHLSKVIQYTMDELQSLASGSLLLNHGVGQTPMCICFLGVHQLRKIVKFLQELSHACSLGRYSERINSIDDANSVSPSLEIKETIVLNGDASCLLLDERLLSTELISGDAFIDNVTSANIRHENGVAEDADALLTWIFAGPSSGEHLTTWMHSKEEKTHQGMEILQTLEKEFYHLQSLCERKCEHLSYEEALQALEDLCLEEGKKRETVAEFGHRSYESVLRKRREELLESENDMFISSRFESDAILNVLKEAEALNVNQFGYEDTYSGMTSQLCDLESGEDDDWRNKDCLHQVDTCIEVAIQRQKEQLSVELSKIDARIMRNVTSMQQLELKLEPVSAYDYQSILLPLVQSYLRAHLEDLAEKDATEKSDAAREAFLAELALDS*********************************************************************SANGDDLKLQEEEFRRKIELEAEERKLEETLAYQRRIENEAKLKHLAEQSKKSAQIFGENVAEGVCDTYLGHGSNDLDMHKSMRLSSPVQLVSKDEFPHNFEGTPVNTANGAAVPIRSSPTSSFQNINTAHHLSIKQGLPNGETPED***********************************NIGVRSDDSHLTGAGKPYALVMFYALLV

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MGHKKKNTAPRSKQSPAAAVEAEPCATPDATSNQTNTEPSEADVVVGGGGASTYGAIKLECERALTALRRGNHKKALRLMKELSSRHENSAYVALIHRVQGTVCVKVASIxxxxxxxxxxxxxxxxxxxxxAELSPHSVEFAHFYANLLYEAANDGKEYEEVVQECERALAIENPIDPAKESLQDESQQKILTADARIAHVQSELRSLIQKSNIASISTWMKNLGTGEEKFRLIPIRRVAEDPMEVRLVQARRPNEIKKATKTPEERRKEIEVRVAAARLLQQKSETGQLYQNNEGERNVDSGSGGLEKRERERRKHGSNLRRNRSKEERRDFVRSYWNSMSLEMKRELLKVKVCDIKAHSASLKDGLASDVLAEALAFAEENKTWRFWVCCRCNEKFADSESHMHHVVQQHMGNLLPKMQAVLPQSVDNEWNEMIDNCSWKPLDIVAAVKMLGRDKTKSRDTEVSEDFYSGNHIEECDDCFKDALDSSPEKENLGHSYNSSSVEGNDCEKVVSIQCRECDGNQVSAVYPLIDSWPVADDTERVKLLERIHALFELLLRHKCLSASHLSKVIQYTMDELQSLASGSLLLNHGVGQTPMCICFLGVHQLRKIVKFLQELSHACSLGRYSERINSIDDANSVSPSLEIKETIVLNGDASCLLLDERLLSTELISGDAFIDNVTSANIRHENGVAEDADALLTWIFAGPSSGEHLTTWMHSKEEKTHQGMEILQTLEKEFYHLQSLCERKCEHLSYEEALQALEDLCLEEGKKRETVAEFGHRSYESVLRKRREELLESENDMFISSRFESDAILNVLKEAEALNVNQFGYEDTYSGMTSQLCDLESGEDDDWRNKDCLHQVDTCIEVAIQRQKEQLSVELSKIDARIMRNVTSMQQLELKLEPVSAYDYQSILLPLVQSYLRAHLEDLAEKDATEKSDAAREAFLAELALDSKKVARGGSDISKHTNDKTKEKRKHKEYRKTKDSKPVGGNERHIVHDKTADLVSFPVESDGDNPDSETVVSANGDDLKLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAKLKHLAEQSKKSAQIFGENVAEGVCDTYLGHGSNDLDMHKSMRLSSPVQLVSKDEFPHNFEGTPVNTANGAAVPIRSSPTSSFQNINTAHHLSIKQGLPNGETPEDGFLPTDRRTGRRGRRHRSSNRSQDWKNQALSSEKENIGVRSDDSHLTGAGKPYALVMFYALLV

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1229
225456629		1653	PREDICTED: uncharacterized protein LOC10	0.971	0.722	0.654	0.0
297734043		1552	unnamed protein product [Vitis vinifera]	0.894	0.708	0.655	0.0
255540879		1617	conserved hypothetical protein [Ricinus	0.962	0.731	0.649	0.0
224119144		1181	predicted protein [Populus trichocarpa]	0.935	0.973	0.624	0.0
449441049		1594	PREDICTED: uncharacterized protein LOC10	0.851	0.656	0.625	0.0
356565061		1611	PREDICTED: uncharacterized protein LOC10	0.951	0.725	0.558	0.0
356513561		1581	PREDICTED: uncharacterized protein LOC10	0.921	0.716	0.572	0.0
4678339		1528	putative protein [Arabidopsis thaliana]	0.899	0.723	0.580	0.0
186510760		1568	Ubiquitin carboxyl-terminal hydrolase-re	0.899	0.704	0.580	0.0
297819402		1635	predicted protein [Arabidopsis lyrata su	0.931	0.700	0.559	0.0

>gi\|225456629\|ref\|XP_002266656.1\| PREDICTED: uncharacterized protein LOC100256959 [Vitis vinifera]	Back alignment and taxonomy information

 Score = 1543 bits (3995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 803/1226 (65%), Positives = 960/1226 (78%), Gaps = 32/1226 (2%)

Query: 1    MGHKKKNTAPRSKQSPAAAVEAEP------CATPDATSNQTNTEPSEADVVVGG--GGAS 52
            MGHKK+N APRSK S  +   A         A  + + N      SE   +V G     S
Sbjct: 1    MGHKKRNLAPRSKGSQGSPGGAAVGGDGANSAEAEQSLNLNVGNSSEKSKMVTGVESEGS 60

Query: 53   TYGAIKLECERALTALRRGNHKKALRLMKELSSRHENSAYVALIHRVQGTVCVKVASIID 112
             Y AIKLECER+LTALRRGNH KALR+MKELS RH+NS + ALIHRVQGTVCVKVASIID
Sbjct: 61   AYSAIKLECERSLTALRRGNHNKALRIMKELSVRHDNSVHSALIHRVQGTVCVKVASIID 120

Query: 113  DLNSKQRHLKNAIESAKKAAELSPHSVEFAHFYANLLYEAANDGKEYEEVVQECERALAI 172
            D N+KQRHLKNAIE+AKKA ELSP+S+EFAHFYANLLYEAA++GKEYEEVV ECERAL+I
Sbjct: 121  DPNAKQRHLKNAIETAKKAVELSPNSIEFAHFYANLLYEAASEGKEYEEVVHECERALSI 180

Query: 173  ENPIDPAKESLQDESQQKILTADARIAHVQSELRSLIQKSNIASISTWMKNLGTGEEKFR 232
            ++P+DPAKESLQDESQQKI T +ARI HVQ+ELRSLIQKSNIASISTWMKNLG GEEKFR
Sbjct: 181  DSPVDPAKESLQDESQQKISTVEARIGHVQNELRSLIQKSNIASISTWMKNLGNGEEKFR 240

Query: 233  LIPIRRVAEDPMEVRLVQARRPNEIKKATKTPEERRKEIEVRVAAARLLQQKSETGQLYQ 292
            LIPIRRV+EDPMEVRLVQ++RPNEIKKATKT EERRKEIEVRVAAARLLQQKS+  Q   
Sbjct: 241  LIPIRRVSEDPMEVRLVQSKRPNEIKKATKTQEERRKEIEVRVAAARLLQQKSDAPQ--S 298

Query: 293  NNEGERN--VDSGSGGLEKRERERRKHGSNLRRNRSKEERRDFVRSYWNSMSLEMKRELL 350
             +EG+R       S G  +R  ERRK   N R+  S  ER+  VRSYWNSMS  M+++LL
Sbjct: 299  QSEGDRTDKASETSSGPGQRVGERRK---NARKFGSTVERKVRVRSYWNSMSFNMRKDLL 355

Query: 351  KVKVCDIKAHSASLKDGLASDVLAEALAFAEENKTWRFWVCCRCNEKFADSESHMHHVVQ 410
            K+++ D+KAH +S+KDGLAS VL+EAL+F E NK W+FWVCCRC EKF DSE HM HVVQ
Sbjct: 356  KIRISDLKAHFSSVKDGLASGVLSEALSFVEVNKVWKFWVCCRCGEKFKDSELHMQHVVQ 415

Query: 411  QHMGNLLPKMQAVLPQSVDNEWNEMIDNCSWKPLDIVAAVKMLGRDKTKSRDTEVSEDFY 470
            +HMGNLLPKMQ+VLPQ++DNEW EMI NCSWKPLDI AAVKML ++++K +  E+ ++FY
Sbjct: 416  EHMGNLLPKMQSVLPQNIDNEWIEMIVNCSWKPLDISAAVKML-KNESKCQQNELIDEFY 474

Query: 471  SGNHIEECDDCFKDALDSSPEKENLGHSYNSSSVEGNDCEKVVSIQCRECDGNQVSAVYP 530
            +GN+ EEC DCFKDA +SSPEK  LG   +  ++  +D +K+ +   RECDGN+ S  Y 
Sbjct: 475  TGNNTEECIDCFKDAWESSPEKGMLGDGCSCGNLVKSDSDKIPNQGSRECDGNEGSKAYL 534

Query: 531  LIDSWPVADDTERVKLLERIHALFELLLRHKCLSASHLSKVIQYTMDELQSLASGSLLLN 590
            L +SWP+ADD+ER KLLE+IH LFE+L++HKCL+ SHLSKV+Q+T DELQ +ASGS LLN
Sbjct: 535  LANSWPLADDSERAKLLEKIHVLFEMLIKHKCLAGSHLSKVMQFTTDELQGIASGSQLLN 594

Query: 591  HGVGQTPMCICFLGVHQLRKIVKFLQELSHACSLGRYSERINS-IDDANSVSPSLEIKET 649
            +GV QTP CICFLG  QLRK++KFLQELSHAC L R S++ +S +DDANS++   +IKE 
Sbjct: 595  YGVDQTPTCICFLGASQLRKLLKFLQELSHACGLARSSDKTSSAMDDANSLNRDFDIKEN 654

Query: 650  IVLNGDASCLLLDERLLSTELISGD---AFIDNV---TSANIRHENGVAEDADALLTWIF 703
            ++LNGDASCLLLDE LL TE  S     A  D+    TS  I +ENGV  D  +LL+WIF
Sbjct: 655  VLLNGDASCLLLDEHLLPTENTSTASHVAVTDDAATETSPIICNENGVQPDGGSLLSWIF 714

Query: 704  AGPSSGEHLTTWMHSKEEKTHQGMEILQTLEKEFYHLQSLCERKCEHLSYEEALQALEDL 763
             GPSS E L +WM  +EEK++QGMEILQ LEKEFYHLQSLCERKCEHLSYEEALQA+EDL
Sbjct: 715  TGPSSVEQLASWMRIREEKSNQGMEILQMLEKEFYHLQSLCERKCEHLSYEEALQAVEDL 774

Query: 764  CLEEGKKRETVAEFGHRSYESVLRKRREELLESEND-MFISSRFESDAILNVLKEAEALN 822
            CLEEGKKRE V +FG RS ESVLRKRREEL ESEN+ M IS+RFE DA++NVLKEAE+LN
Sbjct: 775  CLEEGKKRENVTDFGSRSLESVLRKRREELRESENEVMLISNRFELDAVINVLKEAESLN 834

Query: 823  VNQFGYEDTYSGMTSQLCDLESGEDDDWRNKDCLHQVDTCIEVAIQRQKEQLSVELSKID 882
            +NQFGYE+ Y+G+TS LCDLESGEDDDWR+KD LHQ+D CIEVAIQRQKEQLSVELSKID
Sbjct: 835  MNQFGYEEHYNGVTSHLCDLESGEDDDWRSKDFLHQMDACIEVAIQRQKEQLSVELSKID 894

Query: 883  ARIMRNVTSMQQLELKLEPVSAYDYQSILLPLVQSYLRAHLEDLAEKDATEKSDAAREAF 942
            ARIMRNVT MQQLEL LEPVSA+DY+SI+LPL++S++RAHLEDLAEKDAT+KSDAAREAF
Sbjct: 895  ARIMRNVTGMQQLELTLEPVSAFDYRSIILPLLKSFMRAHLEDLAEKDATQKSDAAREAF 954

Query: 943  LAELALDSKKVARGGSDISKHTNDKTKEKRKHKEYRKTKDSKPVGGNERHIVHDKTADLV 1002
            LAELALDSKK A GGSD S+H +DKTKEK+K KEYRK KDSK  GG+E+H++H  T +  
Sbjct: 955  LAELALDSKKSAIGGSDNSRHNHDKTKEKKKGKEYRKMKDSKGTGGSEQHVLHHVTTEQD 1014

Query: 1003 SFPVESDGDNPDSETVVSANGDDLKLQEEEFRRKIELEAEERKLEETLAYQRRIENEAKL 1062
            S PV SDG++PDSE VVS N D+ K QEEE RRKIELEAEERKLEETL YQRRIENEAK 
Sbjct: 1015 SSPVASDGEHPDSEPVVSVNDDNSKHQEEELRRKIELEAEERKLEETLEYQRRIENEAKQ 1074

Query: 1063 KHLAEQSKKSAQIFGENVAEGVCDTYLGHGSNDLDMHKSMRLSSPVQLVSKDEFPHNFEG 1122
            KHLAEQ KK+  I  E V  G    YL   +++ D H+ +          K +FP++F+G
Sbjct: 1075 KHLAEQRKKTTGIIPEKVVTGFSGGYLNPSADEHDAHEQLE-----HFKQKSQFPNSFDG 1129

Query: 1123 TPVNTANGAAVPIRSSPTSSFQNINTA---HHLSIKQGLPNGETPEDGFLPTDRRTGRRG 1179
             P +  +G  V I S  +S+ Q + +    +H  ++QGLPNG +P DG L ++RR GR+ 
Sbjct: 1130 MPRDVMDGTTVLIDSITSSANQRLRSTPSQYHAKVEQGLPNGGSPVDGVLLSERRIGRKT 1189

Query: 1180 RRHRSSNRSQDWKNQALSSEKENIGV 1205
            +R ++S +  D K QA+SS KEN+ V
Sbjct: 1190 KRQKNSTKLIDGKYQAVSSGKENVEV 1215

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|297734043\|emb\|CBI15290.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255540879\|ref\|XP_002511504.1\| conserved hypothetical protein [Ricinus communis] gi\|223550619\|gb\|EEF52106.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

>gi\|224119144\|ref\|XP_002317996.1\| predicted protein [Populus trichocarpa] gi\|222858669\|gb\|EEE96216.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449441049\|ref\|XP_004138296.1\| PREDICTED: uncharacterized protein LOC101212702 [Cucumis sativus] gi\|449477596\|ref\|XP_004155067.1\| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101229576 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356565061\|ref\|XP_003550763.1\| PREDICTED: uncharacterized protein LOC100800030 [Glycine max]	Back alignment and taxonomy information

>gi\|356513561\|ref\|XP_003525481.1\| PREDICTED: uncharacterized protein LOC100799759 [Glycine max]	Back alignment and taxonomy information

>gi\|4678339\|emb\|CAB41150.1\| putative protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|186510760\|ref\|NP_190372.3\| Ubiquitin carboxyl-terminal hydrolase-related protein [Arabidopsis thaliana] gi\|332644822\|gb\|AEE78343.1\| Ubiquitin carboxyl-terminal hydrolase-related protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297819402\|ref\|XP_002877584.1\| predicted protein [Arabidopsis lyrata subsp. lyrata] gi\|297323422\|gb\|EFH53843.1\| predicted protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1229
TAIR\|locus:2097935		1568	AT3G47890 [Arabidopsis thalian	0.901	0.706	0.539	7e-299
TAIR\|locus:2097835		1607	AT3G47910 [Arabidopsis thalian	0.947	0.724	0.509	4.4e-297
TAIR\|locus:2200360		1147	AT1G65120 [Arabidopsis thalian	0.113	0.121	0.342	4e-35
TAIR\|locus:2042016		1106	AT2G27650 [Arabidopsis thalian	0.122	0.135	0.265	2.1e-26
TAIR\|locus:2042072		1122	AT2G27630 [Arabidopsis thalian	0.096	0.106	0.283	5.6e-26
TAIR\|locus:2200350		1101	AT1G65200 [Arabidopsis thalian	0.113	0.127	0.290	1e-23
TAIR\|locus:2040889		687	AT2G34240 [Arabidopsis thalian	0.178	0.318	0.235	2.1e-20
TAIR\|locus:2035104		1136	AT1G52450 [Arabidopsis thalian	0.096	0.103	0.283	2e-19
TAIR\|locus:2156161		1132	AT5G61950 [Arabidopsis thalian	0.102	0.111	0.310	9.7e-17
TAIR\|locus:2200355		1094	AT1G65110 [Arabidopsis thalian	0.095	0.106	0.327	1.2e-16

TAIR\|locus:2097935 AT3G47890 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2869 (1015.0 bits), Expect = 7.0e-299, P = 7.0e-299
 Identities = 627/1162 (53%), Positives = 794/1162 (68%)

Query:    57 IKLECERALTALRRGNHKKALRLMKELSSRHENSAYVALIHRVQGTVCVKVASIIDDLNS 116
             IKLECE+AL +  RG++ KA+RL+K+  SRH++SA   LIHRVQGT+CVKVA++ +DL +
Sbjct:    16 IKLECEKALKSFGRGSYNKAIRLIKDSCSRHQDSA---LIHRVQGTICVKVAAVYEDLAT 72

Query:   117 KQRHLKNAIESAKKAAELSPHSVEFAHFYANLLYEAANDGK-EYEEVVQECERALAIENP 175
             KQ++L+NAIESA+KA ELSP S+EF HFYANLLYEAANDGK EY+EVVQEC RAL+IENP
Sbjct:    73 KQKYLRNAIESARKAVELSPDSIEFGHFYANLLYEAANDGKREYDEVVQECHRALSIENP 132

Query:   176 IDPAKESLQDESQQKILTADARIAHVQSELRSLIQKSNIASISTWMKNLGTGEEKFRLIP 235
             IDPAKESLQDE+Q KILT +ARI HVQ ELRSLIQKSNI+S+STWM NLG GEEKFRLIP
Sbjct:   133 IDPAKESLQDETQLKILTPEARIVHVQDELRSLIQKSNISSLSTWMNNLGKGEEKFRLIP 192

Query:   236 IRRVAEDPMEVRLVQARRPNEIKKATKTPEERRKEIEVRVAAARLLQQKSETGQLYQ-NN 294
             IRR+AEDP+E  LVQ RRPNEIKKA K+ EE RKE+EVRVAAARLLQQKSE   +   +N
Sbjct:   193 IRRMAEDPIESNLVQTRRPNEIKKANKSIEEIRKEVEVRVAAARLLQQKSECENVGAVDN 252

Query:   295 EGERNVDSGSGGLXXXXXXXXXHGSNLRRNRSKEERRDFVRSYWNSMSLEMKRELLKVKV 354
             +G  +   GSG           HG N RRN S  +RRD V+SYW+SMS EMK++LL+VK+
Sbjct:   253 KGS-DATLGSG---KRSGERRKHG-NARRNGSTADRRDRVKSYWDSMSKEMKKQLLRVKL 307

Query:   355 CDIKAHSASLKDGLASDVLAEALAFAEENKTWRFWVCCRCNEKFADSESHMHHVVQQHMG 414
              D+K+H ++ KDG  +++++EAL+F E NKTWRFWVCC+C+EKF  SE++MHH+VQ HMG
Sbjct:   308 SDLKSHFSASKDGNENEIISEALSFCEANKTWRFWVCCQCSEKFIKSEAYMHHIVQVHMG 367

Query:   415 NLLPKMQAVLPQSVDNEWNEMIDNCSWKPLDIVAAVKMLGRDKTKSRDTEVSEDFYSGNH 474
             N+LPKMQ VLPQS D E  +M+    WKPLD+ AAVK L R + K +++E SE F++G++
Sbjct:   368 NVLPKMQMVLPQSFDTERIDMLLTSPWKPLDLSAAVKWL-RSRQKIQNSEFSE-FHAGDN 425

Query:   475 IEECDDCFKDAL-DSSPEKENLGHSYNSSSVEGNDCEKVVSIQCRECDGNQVSAVYPLID 533
             +++ DDCFKDA  D+SPEKE+LG S      + ND E+            ++S  +P  D
Sbjct:   426 MDDGDDCFKDARNDTSPEKESLGDS--CKGCDENDPEE-----------GKLSITFPPPD 472

Query:   534 SWPVADDTERVKLLERIHALFELLLRHKCLSASHLSKVIQYTMDELQSLASGSLLLNHGV 593
              WP++DD ER KLLE+I A FELL+RHK L+ASH  KVIQ+T+DELQ+LAS S  LN  +
Sbjct:   473 GWPISDDPERAKLLEKIRAAFELLIRHKYLAASHHDKVIQFTLDELQNLASVSQFLNRSL 532

Query:   594 GQTPMCICFLGVHQLRKIVKFLQELSHACSLGRYSERINSIDDANSVSPSLEIKETIVLN 653
              Q+P+CICFLG  QLRKI+KFLQ+LS AC L RYSE+ N  D+ N  +   E+ E I+L+
Sbjct:   533 NQSPICICFLGASQLRKILKFLQDLSQACGLSRYSEQSNPNDEFNFGALCREVTEEILLD 592

Query:   654 GDASCXXXXXXXXXXXXIS----GDAFIDNV---TSANIRHENGVAEDADALLTWIFAGP 706
             G+ SC            I     G A + NV   +S +I + N V+  AD  L+WIF GP
Sbjct:   593 GEDSCLLLDEKLLGTECIQEIYMGSA-LHNVAVASSGDIANGNDVSSGADGFLSWIFTGP 651

Query:   707 SSGEHLTTWMHSKEEKTHQGMEILQTLEKEFYHLQSLCERKCEHLSYEEALQALEDLCLE 766
             SS E + +WM +KEEKT+QG+EI+Q LEKEFYHLQ+LCERKCEHLSYE ALQ +EDLCLE
Sbjct:   652 SSEEQVVSWMRTKEEKTNQGLEIMQHLEKEFYHLQNLCERKCEHLSYEGALQTVEDLCLE 711

Query:   767 EGKKRETVAEFGHRSYESVXXXXXXXXXXSENDM---FISSRFESDAILNVLKEAEALNV 823
             E +KRET AEF H SYESV          +END+   FISSRFE DA+ NVLK+AE LN 
Sbjct:   712 ESRKRETSAEFTHESYESVLRKRREEL--NENDLELVFISSRFELDALTNVLKDAETLNH 769

Query:   824 NQFGYEDTYSGMTSQLCDLESGEDDDWRNKDCLHQVDTCIEVAIQRQKEQLSVELSKIDA 883
             NQFGYE++Y   +SQL DLESGE D+W  KD LH+ D+ IEVAIQ+QKEQLS ELS+IDA
Sbjct:   770 NQFGYEESYGCTSSQLRDLESGEADEWGMKDSLHEADSFIEVAIQKQKEQLSAELSRIDA 829

Query:   884 RIMRNVTSMQQLELKLEPVSAYDYQSILLPLVQSYLRAHLEDLAEKDATEKSDXXXXXXX 943
             ++MRNVT MQQLELKL PVS+ DYQ +LLPLV+SY+RAHLE LAEKDATEKSD       
Sbjct:   830 QMMRNVTGMQQLELKLGPVSSNDYQIVLLPLVKSYMRAHLEALAEKDATEKSDAAREALL 889

Query:   944 XXXXXDSKKVARGGSDISKHTNDKTKEKRKHKEYRKTKDSKPVGGNERHIVHDKTA-DLV 1002
                  DSKK  RG +D SKHT +K+K+K+K K+ RK K+ K   GN+     D     L+
Sbjct:   890 FELALDSKKEGRGRNDNSKHTLEKSKDKKKIKDTRKLKNLKATIGNDHRFNGDSIEHSLL 949

Query:  1003 SFPVESDGDNPDSETVVSANGDDLKLQEEEFXXXXXXXXXXXXXXXXXXYQRRIENEAKL 1062
             S  V S GD+ +++ VVS   + L  +EEE+                  YQRRIENEAK 
Sbjct:   950 S--VASFGDHSEAD-VVSEAIEALSDEEEEYRRCNELEEEERKLAKTLEYQRRIENEAKE 1006

Query:  1063 KHLAEQSKKSAQIFGENVAEGVCDTYLGHGSNDLDMHKSMRLSSPVQLVSKDEFPHNFEG 1122
             KH+AEQ KK +     NV E V D  + +  +D D+ +  +   P+     ++   + EG
Sbjct:  1007 KHIAEQKKKYSCSDPMNVTEAVYDDCIENFFDDADLQEQEK---PINQEKWNKQLDDLEG 1063

Query:  1123 TPVNTANGAAVPIRSSPTSSFQNINTAHHLSI--KQGLPNGETPEDGFLPTDXXXXXXXX 1180
               VN  NG   P  +    S    +TA  L +  ++ +PNG   + G   +D        
Sbjct:  1064 AKVNI-NGV-FPSTNHCVIS----DTAKVLDVISQEVVPNGIAIQAGVFQSDQRPGRRGR 1117

Query:  1181 XXXXXXXXQDWKNQALSSEKEN 1202
                      D K Q   SE E+
Sbjct:  1118 RQKASNKLVDGKYQVTLSESED 1139

GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

TAIR\|locus:2097835 AT3G47910 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2200360 AT1G65120 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2042016 AT2G27650 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2042072 AT2G27630 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2200350 AT1G65200 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2040889 AT2G34240 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2035104 AT1G52450 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2156161 AT5G61950 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2200355 AT1G65110 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00000069001	SubName- Full=Chromosome chr17 scaffold_101, whole genome shotgun sequence; (1638 aa)
		(Vitis vinifera)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1229
pfam04780		463	pfam04780, DUF629, Protein of unknown function (DU	2e-73
pfam04780		463	pfam04780, DUF629, Protein of unknown function (DU	5e-37
pfam04781		112	pfam04781, DUF627, Protein of unknown function (DU	2e-17

>gnl\|CDD\|203088 pfam04780, DUF629, Protein of unknown function (DUF629)	Back alignment and domain information

 Score =  251 bits (644), Expect = 2e-73
 Identities = 96/340 (28%), Positives = 162/340 (47%), Gaps = 21/340 (6%)

Query: 533 DSWPVADDTERVKLLERIHALFELLLRHKCLSASHLSKVIQYTMDELQSLA-SGSLLLNH 591
             WP+ADD ER KLL+ I  L   L   K LS S    V+Q+T+  L  L  S   L + 
Sbjct: 140 KDWPLADDEERSKLLKEIKLLLVSLCDLKILSCSLRDWVMQFTVKHLAKLEVSKQYLDDC 199

Query: 592 GVGQTPMCICFLGVHQLRKIVKFLQELSHACSLGRYSERINSIDDA-NSVSPSLEIKETI 650
            + +TP  ICFL   +L +I+KFL++L          +  + +  A +S   +  +KE I
Sbjct: 200 SLVETPQSICFLECDELNQILKFLKQLK-----CERDDGTSLVCKAVDSFLDNSRVKEKI 254

Query: 651 VLNGDASCLLLDERLLSTELISGDAFIDNVT---SANIRHENGVAEDADALLTWIFAGPS 707
            L+   S LLLD+RLL +E    D   D  T        H   V    D +L+W+F  PS
Sbjct: 255 DLDPQFSFLLLDKRLLKSEEAPFD---DEGTINVFDPNAHYAKVHPQGDDILSWLFDYPS 311

Query: 708 SGEHLTTWMHSKEEKTHQGMEILQTLEKEFYHLQSLCERKCEHLSYEEALQALEDLCLEE 767
             +   + +  +E      + +L+ ++     L++   +K + L Y+ AL   EDLC+ E
Sbjct: 312 VDKEFPSPI--REHNLDIWLAVLRAVQFTCRTLETKYAKKVQMLDYDAALTEAEDLCISE 369

Query: 768 GKKRETVAEFGHRSYESVLRKRREELLESENDMFISSRFESDAILNVLKEAEALNVNQFG 827
            ++R  + E    SY S+LR + EEL+  ++D  ++++    A+ +VL+ A     +   
Sbjct: 370 DERRNNLLEDQWSSYASLLRDKCEELVGRDDDNSLTTKLFLCAVRDVLEGASHPTFDFLD 429

Query: 828 YEDTYSGMTSQLCDLESGEDDDWRNKDCLHQVDTCIEVAI 867
            E+      + + +L+S  DD       +H + + +   +
Sbjct: 430 DEE----CMNLIRELKSLSDDIV--LKSIHLLKSVVTEKV 463

This family represents a region of several plant proteins of unknown function. A C2H2 zinc finger is predicted in this region in some family members, but the spacing between the cysteine residues is not conserved throughout the family. Length = 463

>gnl\|CDD\|203088 pfam04780, DUF629, Protein of unknown function (DUF629)	Back alignment and domain information

>gnl\|CDD\|147106 pfam04781, DUF627, Protein of unknown function (DUF627)	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1229
PF04780		466	DUF629: Protein of unknown function (DUF629); Inte	100.0
KOG1887		806	consensus Ubiquitin carboxyl-terminal hydrolase [P	100.0
PF04781		111	DUF627: Protein of unknown function (DUF627); Inte	99.95
KOG1887		806	consensus Ubiquitin carboxyl-terminal hydrolase [P	98.99
PRK15359		144	type III secretion system chaperone protein SscB;	97.4
PLN03088		356	SGT1, suppressor of G2 allele of SKP1; Provisional	97.14
TIGR02552		135	LcrH_SycD type III secretion low calcium response	96.84
PRK11189		296	lipoprotein NlpI; Provisional	96.44
PRK10803		263	tol-pal system protein YbgF; Provisional	96.29
PRK12370		553	invasion protein regulator; Provisional	96.18
cd00189		100	TPR Tetratricopeptide repeat domain; typically con	96.1
PF13894		24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.05
TIGR02795		119	tol_pal_ybgF tol-pal system protein YbgF. Members	96.02
PRK10370		198	formate-dependent nitrite reductase complex subuni	95.63
PF00096		23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	95.6
PF13432		65	TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL	95.57
PRK12370		553	invasion protein regulator; Provisional	95.39
TIGR02521		234	type_IV_pilW type IV pilus biogenesis/stability pr	94.94
COG4783		484	Putative Zn-dependent protease, contains TPR repea	94.69
TIGR00990		615	3a0801s09 mitochondrial precursor proteins import	94.66
PRK15174		656	Vi polysaccharide export protein VexE; Provisional	94.62
TIGR00990		615	3a0801s09 mitochondrial precursor proteins import	94.6
PF13371		73	TPR_9: Tetratricopeptide repeat	94.59
PRK15174		656	Vi polysaccharide export protein VexE; Provisional	94.32
TIGR03302		235	OM_YfiO outer membrane assembly lipoprotein YfiO.	94.31
KOG2076		895	consensus RNA polymerase III transcription factor	93.87
PF13414		69	TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A	93.81
PRK15179		694	Vi polysaccharide biosynthesis protein TviE; Provi	93.57
PRK02603		172	photosystem I assembly protein Ycf3; Provisional	93.3
cd05804		355	StaR_like StaR_like; a well-conserved protein foun	93.2
PF09976		145	TPR_21: Tetratricopeptide repeat; InterPro: IPR018	93.16
PRK10370		198	formate-dependent nitrite reductase complex subuni	93.1
PRK09782		987	bacteriophage N4 receptor, outer membrane subunit;	93.07
COG3063		250	PilF Tfp pilus assembly protein PilF [Cell motilit	93.04
PRK15179		694	Vi polysaccharide biosynthesis protein TviE; Provi	92.97
PF13414		69	TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A	92.71
PF12895		84	Apc3: Anaphase-promoting complex, cyclosome, subun	91.83
TIGR02917		899	PEP_TPR_lipo putative PEP-CTERM system TPR-repeat	91.74
TIGR02521		234	type_IV_pilW type IV pilus biogenesis/stability pr	91.6
PF09295		395	ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); Inter	91.35
PF13525		203	YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M	91.15
PRK09782		987	bacteriophage N4 receptor, outer membrane subunit;	91.11
PF13512		142	TPR_18: Tetratricopeptide repeat	90.99
TIGR03302		235	OM_YfiO outer membrane assembly lipoprotein YfiO.	90.85
TIGR02917		899	PEP_TPR_lipo putative PEP-CTERM system TPR-repeat	90.81
CHL00033		168	ycf3 photosystem I assembly protein Ycf3	90.51
PF13432		65	TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL	90.47
PRK10747		398	putative protoheme IX biogenesis protein; Provisio	90.31
PRK10049		765	pgaA outer membrane protein PgaA; Provisional	90.19
PF13525		203	YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M	89.67
PRK11788		389	tetratricopeptide repeat protein; Provisional	89.48
COG5010		257	TadD Flp pilus assembly protein TadD, contains TPR	89.43
PRK11788		389	tetratricopeptide repeat protein; Provisional	89.17
PF04959		214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	88.8
PLN03098		453	LPA1 LOW PSII ACCUMULATION1; Provisional	88.56
PF14559		68	TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN	88.26
KOG0553		304	consensus TPR repeat-containing protein [General f	88.21
PRK11447		1157	cellulose synthase subunit BcsC; Provisional	87.6
TIGR00540		409	hemY_coli hemY protein. This is an uncharacterized	87.59
PRK10049		765	pgaA outer membrane protein PgaA; Provisional	87.43
CHL00033		168	ycf3 photosystem I assembly protein Ycf3	87.3
PRK15363		157	pathogenicity island 2 chaperone protein SscA; Pro	87.12
PRK11447		1157	cellulose synthase subunit BcsC; Provisional	87.11
PF12874		25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	86.95
PF13371		73	TPR_9: Tetratricopeptide repeat	86.85
COG4235		287	Cytochrome c biogenesis factor [Posttranslational	86.76
PF13429		280	TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2	86.71
PF12756		100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	86.19
PRK15359		144	type III secretion system chaperone protein SscB;	86.0
PF13429		280	TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2	85.89
PLN03088		356	SGT1, suppressor of G2 allele of SKP1; Provisional	85.39
PF12688		120	TPR_5: Tetratrico peptide repeat	85.09
PRK10866		243	outer membrane biogenesis protein BamD; Provisiona	85.01
TIGR02552		135	LcrH_SycD type III secretion low calcium response	84.98
PRK11906		458	transcriptional regulator; Provisional	84.77
PRK10866		243	outer membrane biogenesis protein BamD; Provisiona	84.57
PF05605		54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	84.42
PHA00616		44	hypothetical protein	83.75
COG4105		254	ComL DNA uptake lipoprotein [General function pred	82.85
smart00355		26	ZnF_C2H2 zinc finger.	82.39
PRK02603		172	photosystem I assembly protein Ycf3; Provisional	82.06
cd05804		355	StaR_like StaR_like; a well-conserved protein foun	81.82
PHA02768		55	hypothetical protein; Provisional	81.04
KOG2076		895	consensus RNA polymerase III transcription factor	80.35
PF13512		142	TPR_18: Tetratricopeptide repeat	80.15

>PF04780 DUF629: Protein of unknown function (DUF629); InterPro: IPR006865 This domain represents a region of several plant proteins of unknown function	Back alignment and domain information

Probab=100.00  E-value=8.7e-153  Score=1297.67  Aligned_cols=464  Identities=48%  Similarity=0.755  Sum_probs=442.3

Q ss_pred             HHHHHhhccCCHHhHcceeEeehhhHHHHHhhhcCchHHHHHHHHHHHHHhcCceeEeecCcCccccCChhHHHHHHHhh
Q 000910          332 DFVRSYWNSMSLEMKRELLKVKVCDIKAHSASLKDGLASDVLAEALAFAEENKTWRFWVCCRCNEKFADSESHMHHVVQQ  411 (1229)
Q Consensus       332 ~~Vr~YW~SMt~E~Kr~FLsVrI~eLkshy~~v~d~~AadtLsEAL~FaKknkSWRFWiCp~CskKF~Dt~Sl~~Hm~qk  411 (1229)
                      ++||+||++||+|+||+||+|+|++|++||.+++++.|+++|++||+|||+|++|||||||+|++||+|+++|++||+++
T Consensus         1 ~~vr~yW~sms~E~kr~FLkVsi~eL~sy~~~~~~~~a~~~Lseal~fak~n~sWrFWiCp~CskkF~d~~~~~~H~~~e   80 (466)
T PF04780_consen    1 DRVRSYWNSMSSEQKRDFLKVSIDELKSYYESVYDREAADALSEALSFAKENKSWRFWICPRCSKKFSDAESCLSHMEQE   80 (466)
T ss_pred             CchhHhhccCCHHHhcCceeeEHHHHHHHHHhccchHHHHHHHHHHHHHHhcCceeEeeCCcccceeCCHHHHHHHHHHh
Confidence            37899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCchhhhccCccccHHHHhhhcCCCCccccHHHHHHHhhhcccccCCcccccccccCCCccccccccccccCCCcc
Q 000910          412 HMGNLLPKMQAVLPQSVDNEWNEMIDNCSWKPLDIVAAVKMLGRDKTKSRDTEVSEDFYSGNHIEECDDCFKDALDSSPE  491 (1229)
Q Consensus       412 H~~~l~PklqsvLPq~ID~~W~~mI~~g~WkPvD~~AA~~mi~~~~k~~~~~~~~~~f~~~~~~~~~~~c~kd~~~s~~~  491 (1229)
                      |+++++|++|+++||+||++|++||++|+||||||+||++|||||++++++      |.|           |        
T Consensus        81 H~~~l~P~lqs~lPqrId~~w~e~I~~~~WkPvD~~AA~~mik~~~k~~~~------~~~-----------~--------  135 (466)
T PF04780_consen   81 HPAGLKPKLQSVLPQRIDDDWAEMISVGSWKPVDAVAAVEMIKNRLKDVKS------FVY-----------K--------  135 (466)
T ss_pred             hhhhcChhhhhhcCcccCHHHHHHHhcCCCccccHHHHHHHHHHHHhhcch------hhh-----------h--------
Confidence            999999999999999999999999999999999999999999999999994      444           5        


Q ss_pred             ccccCCCCCCCCcCCCcccccccccccccCCCCccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhccccchhhhhHH
Q 000910          492 KENLGHSYNSSSVEGNDCEKVVSIQCRECDGNQVSAVYPLIDSWPVADDTERVKLLERIHALFELLLRHKCLSASHLSKV  571 (1229)
Q Consensus       492 ~~~~~~~~~~~~~~~~~~~k~~~~~~~e~~~~~~~~~~~~~~~WPLadD~ER~klLkkI~~lf~~l~k~k~Ls~s~~d~v  571 (1229)
                              |||+                  ++           ||||+|+||+||||+||.||++||+||||||||||||
T Consensus       136 --------~gw~------------------~~-----------WPla~DeeR~klLkkI~~ll~~l~~~k~Ls~s~~~~v  178 (466)
T PF04780_consen  136 --------NGWS------------------KD-----------WPLADDEERAKLLKKIHSLLKSLCKHKILSCSHRDWV  178 (466)
T ss_pred             --------cCCC------------------CC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCcccHHHHHHH
Confidence                    4554                  45           9999999999999999999999999999999999999


Q ss_pred             HHhhHHHHhhcccccccc-cccCCCCCceeeccCchhhHHHHHHHHHHHhhccCcccCCccccccccccCCCCccceeee
Q 000910          572 IQYTMDELQSLASGSLLL-NHGVGQTPMCICFLGVHQLRKIVKFLQELSHACSLGRYSERINSIDDANSVSPSLEIKETI  650 (1229)
Q Consensus       572 i~ft~~eLq~l~s~s~Ll-~~~l~eTP~cICFLe~~qL~~IL~FLq~l~~~cgl~R~s~~~~~~~~~~s~~~~~~vkEkI  650 (1229)
                      |||||+|||+|++++++| ||||+|||||||||||+||+|||+|||+|+  |  .|+++++++++++|+|+++++|||||
T Consensus       179 i~ft~~~L~~l~v~~~~L~~~~l~~tP~~ICFLe~~~L~~Il~fL~~l~--~--~~~~~~~~v~~~~~~~~~~~~vkekI  254 (466)
T PF04780_consen  179 IQFTVEELQKLEVSSQLLVNCSLDETPQCICFLECSQLNKILKFLQELK--C--RRDDGTSLVCRDVDSFWEGSRVKEKI  254 (466)
T ss_pred             HHhhHHHHhccCcchhhhhhccCCCCCceeEecCcHHHHHHHHHHHHHh--h--ccccCcccccccccccccccccceee
Confidence            999999999999666655 999999999999999999999999999999  8  57788899999999999999999999


Q ss_pred             eccCCcchhhhccccccccccCCCccccccccccccCCCCCcCCCCceeeeeccCCCCccccccccchhhhhhhhhhHHH
Q 000910          651 VLNGDASCLLLDERLLSTELISGDAFIDNVTSANIRHENGVAEDADALLTWIFAGPSSGEHLTTWMHSKEEKTHQGMEIL  730 (1229)
Q Consensus       651 ~ld~d~S~LLLDkrlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~gD~~lSWlf~~~si~eql~sw~~~re~~~~~~~~VL  730 (1229)
                      +||+||||||||+|||+|++++++++|+|.++.+++||++++|+||+||||||+||||++||.+|+++|+||++|||+||
T Consensus       255 ~ld~~~S~LLLDkrll~~~~~~~dd~gti~~~~~~~~~~~~~~~gD~ilsWlf~~~s~~~~l~sw~~~~~~~~~~~~avl  334 (466)
T PF04780_consen  255 DLDSDFSCLLLDKRLLKGELDPFDDEGTINVFDPNVHYADVQPQGDDILSWLFDGPSIDEQLPSWIRMREHNLDIWVAVL  334 (466)
T ss_pred             ecCCccceeeechhhhccCCCccCcCCceeccCCCcccccCCCCCCceeEEeccCCcccccccchHHHHHHhhhHHHHHH
Confidence            99999999999999999999999999999666699999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHhhhhhhchhcccccchhhHHHHHHHHHHHHhhhcCccccccchhHHH
Q 000910          731 QTLEKEFYHLQSLCERKCEHLSYEEALQALEDLCLEEGKKRETVAEFGHRSYESVLRKRREELLESENDMFISSRFESDA  810 (1229)
Q Consensus       731 ~~le~ef~~L~~~cekK~~~L~Ye~aL~~vE~lCleE~~rR~~~~e~~~~~YeslLr~r~eel~~~~~d~~~s~~~el~a  810 (1229)
                      |+||+||+||+++|+|||+||+||+||++|||||+||++||++++||||++||||||+|||||+++++|+|+++|+||||
T Consensus       335 ~~v~~~~~~L~~~y~kK~~~l~ye~aL~~ve~lc~~E~~rR~~~~e~~~~~y~slL~~~~eel~~~~~d~~~~~k~~l~~  414 (466)
T PF04780_consen  335 RAVEKEFRTLQSKYEKKCEHLSYEEALQAVENLCLEEDKRRENLPEDQWQSYASLLRKRCEELVENDDDNSLSTKFELDA  414 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHhcccccccccchhhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhccCCCCccccccCcccccccCCCCCCCCcccccccccchhHHHHH
Q 000910          811 ILNVLKEAEALNVNQFGYEDTYSGMTSQLCDLESGEDDDWRNKDCLHQVDTCIEVA  866 (1229)
Q Consensus       811 I~~VLkea~~l~~~~F~~~e~~~~~t~~l~d~~~~e~~~w~~~d~~~~~D~~v~~s  866 (1229)
                      |+|||+||++   |+|+|.+..+| +++|||++|+++|+ ++++++|+.|++|+.+
T Consensus       415 v~~Vl~~a~~---~~f~~~~~~~~-~~~i~~~~s~~~dd-~~~~~~~~l~s~v~~~  465 (466)
T PF04780_consen  415 VRDVLKEAST---PTFNFFGYEDC-TSLIRDLKSGESDD-RVKKSIHLLDSVVQFK  465 (466)
T ss_pred             HHHHHhhccc---CCCCCcccHHH-HHHHhcccccccch-HHHHHHHHHHHHHhhc
Confidence            9999999999   66667666556 77799999998888 8888888888888754

A C2H2 zinc finger is predicted in this region in some family members, but the spacing between the cysteine residues is not conserved throughout the family.

>KOG1887 consensus Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF04781 DUF627: Protein of unknown function (DUF627); InterPro: IPR006866 This domain represents the N-terminal region of several plant proteins of unknown function	Back alignment and domain information

>KOG1887 consensus Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PRK15359 type III secretion system chaperone protein SscB; Provisional	Back alignment and domain information

>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional	Back alignment and domain information

>TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD	Back alignment and domain information

>PRK11189 lipoprotein NlpI; Provisional	Back alignment and domain information

>PRK10803 tol-pal system protein YbgF; Provisional	Back alignment and domain information

>PRK12370 invasion protein regulator; Provisional	Back alignment and domain information

>cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C

Back alignment and domain information

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A	Back alignment and domain information

>TIGR02795 tol_pal_ybgF tol-pal system protein YbgF	Back alignment and domain information

>PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional	Back alignment and domain information

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule	Back alignment and domain information

>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B	Back alignment and domain information

>PRK12370 invasion protein regulator; Provisional	Back alignment and domain information

>TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW	Back alignment and domain information

>COG4783 Putative Zn-dependent protease, contains TPR repeats [General function prediction only]	Back alignment and domain information

>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)	Back alignment and domain information

>PRK15174 Vi polysaccharide export protein VexE; Provisional	Back alignment and domain information

>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)	Back alignment and domain information

>PF13371 TPR_9: Tetratricopeptide repeat	Back alignment and domain information

>PRK15174 Vi polysaccharide export protein VexE; Provisional	Back alignment and domain information

>TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO	Back alignment and domain information

>KOG2076 consensus RNA polymerase III transcription factor TFIIIC [Transcription]	Back alignment and domain information

>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A	Back alignment and domain information

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional	Back alignment and domain information

>PRK02603 photosystem I assembly protein Ycf3; Provisional	Back alignment and domain information

>cd05804 StaR_like StaR_like; a well-conserved protein found in bacteria, plants, and animals	Back alignment and domain information

>PF09976 TPR_21: Tetratricopeptide repeat; InterPro: IPR018704 This domain, found in various hypothetical prokaryotic proteins, has no known function	Back alignment and domain information

>PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional	Back alignment and domain information

>PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional	Back alignment and domain information

>COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion]	Back alignment and domain information

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional	Back alignment and domain information

>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A	Back alignment and domain information

>PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A	Back alignment and domain information

>TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein	Back alignment and domain information

>TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW	Back alignment and domain information

>PF09295 ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); InterPro: IPR015374 ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialised cargo from the Golgi	Back alignment and domain information

>PF13525 YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M_A 2YHC_A	Back alignment and domain information

>PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional	Back alignment and domain information

>PF13512 TPR_18: Tetratricopeptide repeat	Back alignment and domain information

>TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO	Back alignment and domain information

>TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein	Back alignment and domain information

>CHL00033 ycf3 photosystem I assembly protein Ycf3	Back alignment and domain information

>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B	Back alignment and domain information

>PRK10747 putative protoheme IX biogenesis protein; Provisional	Back alignment and domain information

>PRK10049 pgaA outer membrane protein PgaA; Provisional	Back alignment and domain information

>PF13525 YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M_A 2YHC_A	Back alignment and domain information

>PRK11788 tetratricopeptide repeat protein; Provisional	Back alignment and domain information

>COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion]	Back alignment and domain information

>PRK11788 tetratricopeptide repeat protein; Provisional	Back alignment and domain information

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []	Back alignment and domain information

>PLN03098 LPA1 LOW PSII ACCUMULATION1; Provisional	Back alignment and domain information

>PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A	Back alignment and domain information

>KOG0553 consensus TPR repeat-containing protein [General function prediction only]	Back alignment and domain information

>PRK11447 cellulose synthase subunit BcsC; Provisional	Back alignment and domain information

>TIGR00540 hemY_coli hemY protein	Back alignment and domain information

>PRK10049 pgaA outer membrane protein PgaA; Provisional	Back alignment and domain information

>CHL00033 ycf3 photosystem I assembly protein Ycf3	Back alignment and domain information

>PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional	Back alignment and domain information

>PRK11447 cellulose synthase subunit BcsC; Provisional	Back alignment and domain information

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A	Back alignment and domain information

>PF13371 TPR_9: Tetratricopeptide repeat	Back alignment and domain information

>COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B	Back alignment and domain information

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A	Back alignment and domain information

>PRK15359 type III secretion system chaperone protein SscB; Provisional	Back alignment and domain information

>PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B	Back alignment and domain information

>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional	Back alignment and domain information

>PF12688 TPR_5: Tetratrico peptide repeat	Back alignment and domain information

>PRK10866 outer membrane biogenesis protein BamD; Provisional	Back alignment and domain information

>TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD	Back alignment and domain information

>PRK11906 transcriptional regulator; Provisional	Back alignment and domain information

>PRK10866 outer membrane biogenesis protein BamD; Provisional	Back alignment and domain information

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins	Back alignment and domain information

>PHA00616 hypothetical protein	Back alignment and domain information

>COG4105 ComL DNA uptake lipoprotein [General function prediction only]	Back alignment and domain information

>smart00355 ZnF_C2H2 zinc finger	Back alignment and domain information

>PRK02603 photosystem I assembly protein Ycf3; Provisional	Back alignment and domain information

>cd05804 StaR_like StaR_like; a well-conserved protein found in bacteria, plants, and animals	Back alignment and domain information

>PHA02768 hypothetical protein; Provisional	Back alignment and domain information

>KOG2076 consensus RNA polymerase III transcription factor TFIIIC [Transcription]	Back alignment and domain information

>PF13512 TPR_18: Tetratricopeptide repeat	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1229
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-20
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-11

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 96.8 bits (240), Expect = 2e-20
 Identities = 105/673 (15%), Positives = 220/673 (32%), Gaps = 162/673 (24%)

Query: 404  HMHHVVQQHMGNLLPKMQAVLPQSVDNEWNEMIDNCSWKPLDIVAAVKMLGRDKTKS--R 461
            H HH +    G    + + +L    D      +DN   K  D+        +D  KS   
Sbjct: 2    HHHHHMDFETGEHQYQYKDILSVFEDA----FVDNFDCK--DV--------QDMPKSILS 47

Query: 462  DTEVSEDFYSGNHIEECDDCFKDALDSSPEK-------ENLGHSYN----SSSVEGND-- 508
              E+     S + +      F   L S  E+       E L  +Y         E     
Sbjct: 48   KEEIDHIIMSKDAVSGTLRLF-WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPS 106

Query: 509  CEKVVSIQCRE--CDGNQVSAVYPLIDSWPVADDTERVKLLERIH-ALFELLLRHKCLSA 565
                + I+ R+   + NQV A Y +           R++   ++  AL EL         
Sbjct: 107  MMTRMYIEQRDRLYNDNQVFAKYNV----------SRLQPYLKLRQALLEL--------- 147

Query: 566  SHLSKVIQYTMDEL--QSLASGSLLLNHGVGQTPMCICF---LG-VHQLRKIVKFLQELS 619
                 V+   +       +A   + L++ V        F   L   +    +++ LQ+L 
Sbjct: 148  RPAKNVLIDGVLGSGKTWVAL-DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL 206

Query: 620  H-----ACSLGRYSERI-NSIDDANSVSPSLEIKETIVLNGDASCLL-LDERLLSTELIS 672
            +       S   +S  I   I    +     E++  +      +CLL L   + + +   
Sbjct: 207  YQIDPNWTSRSDHSSNIKLRIHSIQA-----ELRRLLKSKPYENCLLVLLN-VQNAKAW- 259

Query: 673  GDAFIDN-----VTSANIRHENGVAEDADALLTWIFAGPSSGEHLTTWMHSKEEKTHQGM 727
             +AF +      +T+          +  D L        ++  H++   HS      +  
Sbjct: 260  -NAF-NLSCKILLTTRF-------KQVTDFL------SAATTTHISLDHHSMTLTPDEVK 304

Query: 728  EIL-QTLEKEFYHLQSLCERKCEHLSYEEALQALEDLCLEEGKKRETVAEFGHRSYESVL 786
             +L + L+      Q L            ++ A     + +G       +     ++ V 
Sbjct: 305  SLLLKYLDCRP---QDLPREVLTTNPRRLSIIAES---IRDGLAT---WDN----WKHVN 351

Query: 787  RKRREELLESENDMFISSRFESDAILNVLKEAE------ALNVNQFGYEDTYSGMTSQ-L 839
              +   ++ES               LNVL+ AE       L+V  F     +  + +  L
Sbjct: 352  CDKLTTIIES--------------SLNVLEPAEYRKMFDRLSV--FP-PSAH--IPTILL 392

Query: 840  CDLESGEDDDWRNK---DCLHQVDTCIEVA-IQRQKEQLSVELSKIDARIMRNVTSMQQL 895
              +       W +    D +  V+   + + +++Q ++ ++ +  I   +   + +   L
Sbjct: 393  SLI-------WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL 445

Query: 896  ELKL----EPVSAYDYQSILLPLVQSYLRAHLED-LAEKDATEKSDAAREAFLAELALDS 950
               +         +D   ++ P +  Y  +H+   L   +  E+    R  FL +     
Sbjct: 446  HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL-DFRFLE 504

Query: 951  KKVARGGS--DISKHTNDKTKEKRKHKEYRKTKDSKP----------VGGNERHIVHDKT 998
            +K+    +  + S    +  ++ + +K Y    D K           +   E +++  K 
Sbjct: 505  QKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKY 564

Query: 999  ADLVSFPVESDGD 1011
             DL+   + ++ +
Sbjct: 565  TDLLRIALMAEDE 577

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1229
d1elwa_		117	Hop {Human (Homo sapiens) [TaxId: 9606]}	97.2
d1a17a_		159	Protein phosphatase 5 {Human (Homo sapiens) [TaxId	97.16
d2c2la1		201	STIP1 homology and U box-containing protein 1, STU	96.87
d1hxia_		112	Peroxin pex5 (peroxisomal targeting signal 1 (PTS1	96.55
d1fcha_		323	Peroxin pex5 (peroxisomal targeting signal 1 (PTS1	95.93
d1fcha_		323	Peroxin pex5 (peroxisomal targeting signal 1 (PTS1	95.91
d1w3ba_		388	O-GlcNAc transferase p110 subunit, OGT {Human (Hom	94.93
d1xnfa_		259	Lipoprotein NlpI {Escherichia coli [TaxId: 562]}	94.57
d1zu2a1		145	Mitochondrial import receptor subunit tom20-3 {Tha	94.39
d1w3ba_		388	O-GlcNAc transferase p110 subunit, OGT {Human (Hom	94.22
d1elra_		128	Hop {Human (Homo sapiens) [TaxId: 9606]}	93.85
d1hh8a_		192	Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H	92.79
d1zbpa1		264	Hypothetical protein VPA1032 {Vibrio parahaemolyti	90.07
d1kt1a1		168	FKBP51, C-terminal domain {Monkey (Saimiri bolivie	88.52
d2h6fa1		315	Protein farnesyltransferase alpha-subunit {Human (	87.1
d1ya0a1		497	SMG-7 {Human (Homo sapiens) [TaxId: 9606]}	85.58
d1dcea1		334	Rab geranylgeranyltransferase alpha-subunit, N-ter	84.95
d1ihga1		169	Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}	84.17
d1xnfa_		259	Lipoprotein NlpI {Escherichia coli [TaxId: 562]}	84.03
d2fbna1		153	Putative 70 kda peptidylprolyl isomerase PFL2275c	81.95

>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Hop
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.0071  Score=35.29  Aligned_cols=101  Identities=21%  Similarity=0.190  Sum_probs=86.6

Q ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
Q ss_conf             99999986099899999999999851383135799977213589985203781479999979999999996319972677
Q 000910           62 ERALTALRRGNHKKALRLMKELSSRHENSAYVALIHRVQGTVCVKVASIIDDLNSKQRHLKNAIESAKKAAELSPHSVEF  141 (1229)
Q Consensus        62 e~AL~~~rrGnH~KAL~rakeLasrHp~S~~~alvH~lqG~i~~~~A~~~ed~~~K~~hL~~Ale~~s~A~~LsPnsIei  141 (1229)
                      +++-.++..|++.+|+......+...|.+   +.++..-|.++..+..    .       ..|+..+.++..+.|+..+.
T Consensus         8 ~~g~~~~~~g~~~eAi~~~~~al~~~p~~---~~~~~~~a~~~~~~~~----~-------~~A~~~~~~al~~~p~~~~~   73 (117)
T d1elwa_           8 EKGNKALSVGNIDDALQCYSEAIKLDPHN---HVLYSNRSAAYAKKGD----Y-------QKAYEDGCKTVDLKPDWGKG   73 (117)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHHTC----H-------HHHHHHHHHHHHHCTTCHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHCCCCC---HHHHHCCCCCCCCCCC----C-------CCCCHHHHHHHHHCCCHHHH
T ss_conf             99999999699999999999988619960---1343000110110000----1-------12100134677740220267


Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             8889999999830386389999999998436799996533
Q 000910          142 AHFYANLLYEAANDGKEYEEVVQECERALAIENPIDPAKE  181 (1229)
Q Consensus       142 A~f~A~lL~ela~~~~~YeeAv~Ec~RALaI~sP~DPA~~  181 (1229)
                      -...|.++..+    +.|++|...+++|+.+ .|.+|...
T Consensus        74 ~~~~g~~~~~~----~~~~~A~~~~~~a~~~-~p~~~~~~  108 (117)
T d1elwa_          74 YSRKAAALEFL----NRFEEAKRTYEEGLKH-EANNPQLK  108 (117)
T ss_dssp             HHHHHHHHHHT----TCHHHHHHHHHHHHTT-CTTCHHHH
T ss_pred             HHHHHHHHHHC----CCHHHHHHHHHHHHHH-CCCCHHHH
T ss_conf             78899999981----2799999999999984-98989999

PyMOL of d1elwa_

>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}	Back information, alignment and structure

>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}	Back information, alignment and structure

>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}	Back information, alignment and structure

>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}	Back information, alignment and structure