Citrus Sinensis ID: 001237

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------112

MASLVSSAFTLKPDQLSSHSQKHYFLHSFLPRKANYQIHSKYPLKVKCAVVGNGLFTQTSPEVRRIVPENRDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEELRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKKKKQGAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCMYDDVKEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHALHKRVEQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWGKPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVELPDEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDEIASLPSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTNKKGQVVDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNELGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIERQKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQVLFTVAISCPTELPICTVCYLA

cccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHHHccccEEEEEEEEcccccccccHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHHHccccEEEEcccHHHHHcccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccHHHcccccccccccccccccHHHHHHHHccccccccccccccccEEEEEEcccHHHccccHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHcccccccccEEEEEEcccccccccccccccHHHHHHHHHccccEEEEEccccccHHHHHcccccccHHHHHHHEEccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccHHHHHHHcHHHHHcHHHHHHHHHHHHcccccccccccccEEEEEEEEccEEEEEccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHcccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEccccccccHHHHHHHHHHccEEEccccccccEEEEEccccccccccEEEEEcccHHHHHHHHHHHHHHHHHcccccccccccccc

ccccccccccccHHHHccccccccccHcccccccccccccccccEEEEEEcccccEEcccccEEEEccccccccccEEEEEEEEcHHHHHHHHHHHHHHHHHccccEEEEEEEEHHHcccHHHHHHHHHHHHHccEEEEHHHHHHHHHHHHHHHHHHHHHccccEEEcccHHHHHHHHccccccHHHHcccHHHHHHHHccccccccHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHcccHHHHHHHHHHccccccccccccccEEEEEEEEHHEccccHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHccccccccEEEEEEEcccHEccccccccccHHHHHHHHHccccEEEEEEEEcccHHHHHcccccccHHHHHHHEEcccccccEEEEEEEccccccccEcccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEcccccccEEEEEEcccHHHHHHHHHHHHHcccccccccccHHHHHHHHHcccHHccccccccHHHHccHHHHHcccHHHHHHHHHccccccccccccccEEEEEEEcccEEEEEcccccccccHHHHHccccccccHHHHHHHHHHHHHccccEEEEEccccccEcccccccccccccccHHHHcccccEEEEEEccccHHHHHHHHHHHHHHHcccccHHHcccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccHHHHHHHHHHHHHccccccccccHHHHHHHHHcccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccHHHHHHHHHHcccEcccccccEccEEEEEHHHHccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc

maslvssaftlkpdqlsshsqkhyflhsflprkanyqihskypLKVKCAVvgnglftqtspevrrivpenrdnlptvKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEELRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDavlvfpsmpevmrlnklgsfsmsqlgqskspfFQLFKkkkqgagfADSMLKLVRTLPKVlkylpsdkaqDARLYILSLQFwlggspdnLQNFLKMISgsyvpalrgqkieyadpvlfldtgiwhplapcmyddVKEYLNWYgtrkdtneklkgpdapviglilqrshivtgddsHYVAVIMELEARgakvipifaggldfagpverffvdpvmkkpmvnsaisltgfalvggparqdhPRAIEALRKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVAlpeldgglepivfagrdprtgkAHALHKRVEQLCTRAIRWGELKRKTKAEKKLAITVfsfppdkgnigtaAYLNVFSSIFSVLKDLQrdgynveglpetSEALIEEIIhdkeaqfsspnlniAYKMGVREYQSLTPYATaleenwgkppgnlnsdgenLLVYGKQYgnvfigvqptfgyegdpmrllfsksasphhgfAAYYSFVEKIFKADAvlhfgthgslefmpgkqvgmsdvcypdslignipnvyyyaannpseaTIAKRRSYANtisyltppaenaglYKGLKQLSELISSYQSlkdtgrgpqIVSSIISTAKqcnldkdvelpdegaeisakerdlVVGKVYSKIMEIESrllpcglhvigeppsALEAVATLVNIaaldrpedeiaslPSILAETvgrdiediyrgsdkgiLKDVELLRQITEASRGAISAFVEkttnkkgqvVDVADKLSSIlgfginepwiqylsntkfyraDRATLRTLFEFVGECLKLVVADNELGSLKQAlegkyvepgpggdpirnpkvlptgknihaldpqaipttaAMQSAKVVVDRLIErqkvdnggkypETVALVLWGTDNIKTYGESLAQVLWMIgvrpvsdtfgrvnrvepvsleelgrpridVVVNCSGVFRDLFINQVLFTVAIscptelpictvcyla

MASLVSSAftlkpdqlsshSQKHYFLHSFLPRKANYQIHSKYPLKVKCAVVGNGlftqtspevrrivpenrdnlpTVKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEELRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKKKKQGAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCMYDDVKEYLNWYGTrkdtneklkgpDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHALHKRVEQLCTrairwgelkrktkaeKKLAItvfsfppdkgnIGTAAYLNVFSSIFSVLKDLQRDGYNVEGLPETSEALIEEIIHdkeaqfsspNLNIAYKMGVREYQSLTPYATALEENWGKPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDvelpdegaeisakerdlvvGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALdrpedeiaslpsilaetvgrdiediyrgsdkgilkDVELLRQITEASRGAISAfvekttnkkgqvvDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNELGSLKQALegkyvepgpggdPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIErqkvdnggkypeTVALVLWGTDNIKTYGESLAQVLWMIGVRpvsdtfgrvnrvepvsleelgrpriDVVVNCSGVFRDLFINQVLFTVAIscptelpictvcyla

**********************HYFLHSFLPRKANYQIHSKYPLKVKCAVVGNGLFTQTSPEVRRIVPENRDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEELRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKL**************FFQLFKKKKQGAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCMYDDVKEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHALHKRVEQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWGK****LNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQ*********QIVSSIISTAKQCNL***************KERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDEIASLPSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTNKKGQVVDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNELGSLKQALE*******************************AIPTTAAMQSAKVVVDRLIERQKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQVLFTVAISCPTELPICTVCYL*

******S*********************************************NG*******************LPTVKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEELRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKKKKQGAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCMYDDVKEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGG*****HPRAIEALRKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHALHKRVEQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWGKPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQ***********VSSIISTAKQCNLDKDVELPDEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDEIASLPSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTNKKGQVVDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNELGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIERQKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQVLFTVAISCPTELPICTVCYL*

*********TLKPDQLSSHSQKHYFLHSFLPRKANYQIHSKYPLKVKCAVVGNGLFTQTSPEVRRIVPENRDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEELRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKKKKQGAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCMYDDVKEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHALHKRVEQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWGKPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVELPDEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDEIASLPSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTNKKGQVVDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNELGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIERQKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQVLFTVAISCPTELPICTVCYLA

**********************HYFLHSFLPR********KYPLKVKCAVVGNGLFTQTSPEVRRIVPENRDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEELRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKKKKQGAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCMYDDVKEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHALHKRVEQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWGKPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVELPDEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDEIASLPSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTNKKGQVVDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNELGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIERQKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQVLFTVAISCPTELPICTVCYL*

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1117	2.2.26 [Sep-21-2011]
Q9FNB0		1381	Magnesium-chelatase subun	yes	no	0.990	0.800	0.865	0.0
B8ANF1		1387	Magnesium-chelatase subun	N/A	no	0.991	0.798	0.833	0.0
Q10M50		1387	Magnesium-chelatase subun	yes	no	0.991	0.798	0.830	0.0
Q9RFD5		1193	Magnesium-chelatase subun	yes	no	0.581	0.544	0.395	1e-146
P26162		1189	Magnesium-chelatase subun	yes	no	0.587	0.551	0.391	1e-146
O50314		1272	Magnesium-chelatase subun	no	no	0.846	0.743	0.322	1e-140
Q58318		1232	Uncharacterized protein M	yes	no	0.692	0.628	0.299	6e-98
Q9HZQ3		1248	Aerobic cobaltochelatase	yes	no	0.671	0.600	0.304	4e-89
Q58836		1226	Uncharacterized protein M	no	no	0.645	0.588	0.298	2e-87
P29929		1275	Aerobic cobaltochelatase	N/A	no	0.717	0.629	0.291	6e-82

>sp\|Q9FNB0\|CHLH_ARATH Magnesium-chelatase subunit ChlH, chloroplastic OS=Arabidopsis thaliana GN=CHLH PE=1 SV=1	Back alignment and function desciption

 Score = 1999 bits (5180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 963/1113 (86%), Positives = 1037/1113 (93%), Gaps = 7/1113 (0%)

Query: 1    MASLVSSAFTL---KPDQLSSHSQKHYFLHSFLPRKANYQIHSKYPLKVKCAVVGNGLFT 57
            MASLV S FTL   K + LSS +      HSFL +K      +K   KVK AV GNGLFT
Sbjct: 1    MASLVYSPFTLSTSKAEHLSSLTNSTK--HSFLRKKHRSTKPAKSFFKVKSAVSGNGLFT 58

Query: 58   QTSPEVRRIVPENRDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEE 117
            QT+PEVRRIVP  RDN+PTVKIVYVVLEAQYQS+LS AVQ+LN+   +ASYEVVGYLVEE
Sbjct: 59   QTNPEVRRIVPIKRDNVPTVKIVYVVLEAQYQSSLSEAVQSLNKTSRFASYEVVGYLVEE 118

Query: 118  LRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRL 177
            LRD +TY  FC+DL++ANIFIGSLIFVEELA+K+K AVEKERDR+DAVLVFPSMPEVMRL
Sbjct: 119  LRDKNTYNNFCEDLKDANIFIGSLIFVEELAIKVKDAVEKERDRMDAVLVFPSMPEVMRL 178

Query: 178  NKLGSFSMSQLGQSKSPFFQLFKKKKQG-AGFADSMLKLVRTLPKVLKYLPSDKAQDARL 236
            NKLGSFSMSQLGQSKSPFFQLFK+KKQG AGFADSMLKLVRTLPKVLKYLPSDKAQDARL
Sbjct: 179  NKLGSFSMSQLGQSKSPFFQLFKRKKQGSAGFADSMLKLVRTLPKVLKYLPSDKAQDARL 238

Query: 237  YILSLQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCMYDD 296
            YILSLQFWLGGSPDNLQNF+KMISGSYVPAL+G KIEY+DPVLFLDTGIWHPLAP MYDD
Sbjct: 239  YILSLQFWLGGSPDNLQNFVKMISGSYVPALKGVKIEYSDPVLFLDTGIWHPLAPTMYDD 298

Query: 297  VKEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPI 356
            VKEY NWY TR+DTN+ LK  DA V+GL+LQRSHIVTGDDSHYVAVIMELEARGAKV+PI
Sbjct: 299  VKEYWNWYDTRRDTNDSLKRKDATVVGLVLQRSHIVTGDDSHYVAVIMELEARGAKVVPI 358

Query: 357  FAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYI 416
            FAGGLDF+GPVE++FVDPV K+P+VNSA+SLTGFALVGGPARQDHPRAIEAL+KLDVPY+
Sbjct: 359  FAGGLDFSGPVEKYFVDPVSKQPIVNSAVSLTGFALVGGPARQDHPRAIEALKKLDVPYL 418

Query: 417  VALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHALHKRV 476
            VA+PLVFQTTEEWLNSTLGLHPIQVALQVALPELDG +EPIVFAGRDPRTGK+HALHKRV
Sbjct: 419  VAVPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGAMEPIVFAGRDPRTGKSHALHKRV 478

Query: 477  EQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDG 536
            EQLC RAIRWGELKRKTKAEKKLAITVFSFPPDKGN+GTAAYLNVF+SIFSVL+DL+RDG
Sbjct: 479  EQLCIRAIRWGELKRKTKAEKKLAITVFSFPPDKGNVGTAAYLNVFASIFSVLRDLKRDG 538

Query: 537  YNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWGKPPG 596
            YNVEGLPE +E LIEEIIHDKEAQFSSPNLN+AYKMGVREYQ LTPYA ALEENWGKPPG
Sbjct: 539  YNVEGLPENAETLIEEIIHDKEAQFSSPNLNVAYKMGVREYQDLTPYANALEENWGKPPG 598

Query: 597  NLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFK 656
            NLNSDGENLLVYGK YGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYS+VEKIFK
Sbjct: 599  NLNSDGENLLVYGKAYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSYVEKIFK 658

Query: 657  ADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYAN 716
            ADAVLHFGTHGSLEFMPGKQVGMSD C+PDSLIGNIPNVYYYAANNPSEATIAKRRSYAN
Sbjct: 659  ADAVLHFGTHGSLEFMPGKQVGMSDACFPDSLIGNIPNVYYYAANNPSEATIAKRRSYAN 718

Query: 717  TISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVELP 776
            TISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDV+LP
Sbjct: 719  TISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVDLP 778

Query: 777  DEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPE 836
            DEG E+S K+RD VVGKVYSKIMEIESRLLPCGLHVIGEPPSA+EAVATLVNIAALDRPE
Sbjct: 779  DEGLELSPKDRDSVVGKVYSKIMEIESRLLPCGLHVIGEPPSAMEAVATLVNIAALDRPE 838

Query: 837  DEIASLPSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTNKKGQ 896
            DEI++LPSILAE VGR+IED+YRGSDKGIL DVELL++IT+ASRGA+SAFVEKTTN KGQ
Sbjct: 839  DEISALPSILAECVGREIEDVYRGSDKGILSDVELLKEITDASRGAVSAFVEKTTNSKGQ 898

Query: 897  VVDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNELGSL 956
            VVDV+DKL+S+LGFGINEPW++YLSNTKFYRA+R  LRT+F F+GECLKLVV DNELGSL
Sbjct: 899  VVDVSDKLTSLLGFGINEPWVEYLSNTKFYRANRDKLRTVFGFLGECLKLVVMDNELGSL 958

Query: 957  KQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIERQKV 1016
             QALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAM SAK+VV+RL+ERQK+
Sbjct: 959  MQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMASAKIVVERLVERQKL 1018

Query: 1017 DNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRP 1076
            +N GKYPET+ALVLWGTDNIKTYGESL QVLWMIGVRP++DTFGRVNRVEPVSLEELGRP
Sbjct: 1019 ENEGKYPETIALVLWGTDNIKTYGESLGQVLWMIGVRPIADTFGRVNRVEPVSLEELGRP 1078

Query: 1077 RIDVVVNCSGVFRDLFINQV-LFTVAISCPTEL 1108
            RIDVVVNCSGVFRDLFINQ+ L   AI    EL
Sbjct: 1079 RIDVVVNCSGVFRDLFINQMNLLDRAIKMVAEL 1111

Multifunctional protein involved in chlorophyll synthesis, plastid-to-nucleus retrograde signaling and abscisic acid (ABA) perception. In chlorophyll synthesis, catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. The reaction takes place in two steps, with an ATP-dependent activation followed by an ATP-dependent chelation step. In addition to its function in the Mg-chelatase enzyme, is required for the plastid-to-nucleus retrogade signaling. The plastid-to-nucleus signal plays an important role in the coordinated expression of both nuclear- and chloroplast-localized genes that encode photosynthesis-related proteins. Has a role in mediating ABA signaling in stomatal guard cells and during seed germination.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 6EC: .EC: 1EC: .EC: 1

>sp\|B8ANF1\|CHLH_ORYSI Magnesium-chelatase subunit ChlH, chloroplastic OS=Oryza sativa subsp. indica GN=CHLH PE=3 SV=1	Back alignment and function description

>sp\|Q10M50\|CHLH_ORYSJ Magnesium-chelatase subunit ChlH, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLH PE=1 SV=1	Back alignment and function description

>sp\|Q9RFD5\|BCHH_RHOS4 Magnesium-chelatase subunit H OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=bchH PE=3 SV=1	Back alignment and function description

>sp\|P26162\|BCHH_RHOCB Magnesium-chelatase subunit H OS=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=bchH PE=3 SV=2	Back alignment and function description

>sp\|O50314\|BCHH_CHLP8 Magnesium-chelatase subunit H OS=Chlorobaculum parvum (strain NCIB 8327) GN=bchH PE=3 SV=2	Back alignment and function description

>sp\|Q58318\|Y908_METJA Uncharacterized protein MJ0908 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0908 PE=3 SV=1	Back alignment and function description

>sp\|Q9HZQ3\|COBN_PSEAE Aerobic cobaltochelatase subunit CobN OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=cobN PE=3 SV=1	Back alignment and function description

>sp\|Q58836\|Y1441_METJA Uncharacterized protein MJ1441 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1441 PE=3 SV=1	Back alignment and function description

>sp\|P29929\|COBN_PSEDE Aerobic cobaltochelatase subunit CobN OS=Pseudomonas denitrificans GN=cobN PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1117
255582591		1367	Magnesium-chelatase subunit H, putative	0.978	0.799	0.903	0.0
356534764		1384	PREDICTED: magnesium-chelatase subunit H	0.991	0.800	0.900	0.0
225441836		1381	PREDICTED: magnesium-chelatase subunit H	0.991	0.801	0.895	0.0
351726696		1383	magnesium chelatase subunit [Glycine max	0.991	0.801	0.893	0.0
291419594		1381	magnesium chelatase H subunit [Vitis vin	0.991	0.801	0.894	0.0
356572030		1383	PREDICTED: magnesium-chelatase subunit H	0.991	0.801	0.895	0.0
338173747		1382	magnesium chelatase H subunit [Camellia	0.991	0.801	0.888	0.0
345114263		1380	magnesium chelatase H subunit [Fragaria	0.990	0.801	0.885	0.0
449463350		1382	PREDICTED: magnesium-chelatase subunit C	0.991	0.801	0.880	0.0
449503798		1382	PREDICTED: magnesium-chelatase subunit C	0.991	0.801	0.880	0.0

>gi\|255582591\|ref\|XP_002532078.1\| Magnesium-chelatase subunit H, putative [Ricinus communis] gi\|223528260\|gb\|EEF30312.1\| Magnesium-chelatase subunit H, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 2081 bits (5393), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1005/1112 (90%), Positives = 1056/1112 (94%), Gaps = 19/1112 (1%)

Query: 1    MASLVSSAFTL---KPDQLSSHSQKHYFLHSFLPRKANYQIHSKYPLKVKCAVVGNGLFT 57
            MA +VSS FTL   KPDQLSS SQKHYFLHSFLP+KA  Q +SK  LKVKCA +GNGLFT
Sbjct: 1    MAYVVSSPFTLPSTKPDQLSSLSQKHYFLHSFLPKKA-IQTNSKSTLKVKCAAIGNGLFT 59

Query: 58   QTSPEVRRIVPENRDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEE 117
            QT+PEVRR+VPE  +NLPTVK+VYVVLEAQYQS+L+AAVQALN++  +ASYEVVGYLVEE
Sbjct: 60   QTTPEVRRVVPEKNNNLPTVKVVYVVLEAQYQSSLTAAVQALNKKSQFASYEVVGYLVEE 119

Query: 118  LRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRL 177
            LRD +TYK FCKDLE+ANIFIGSLIFVEELALK+KAAVEKERDRLDAVLVFPSMPEVMRL
Sbjct: 120  LRDKNTYKAFCKDLEDANIFIGSLIFVEELALKVKAAVEKERDRLDAVLVFPSMPEVMRL 179

Query: 178  NKLGSFSMSQLGQSKSPFFQLFKKKKQGAGFADSMLKLVRTLPKVLKYLPSDKAQDARLY 237
            NKLGSFSMSQLGQSKSPFFQLFKKKKQGAGFADSMLKLVRTLPKVLKYLPSDKAQDARLY
Sbjct: 180  NKLGSFSMSQLGQSKSPFFQLFKKKKQGAGFADSMLKLVRTLPKVLKYLPSDKAQDARLY 239

Query: 238  ILSLQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCMYDDV 297
            ILSLQFWLGGSP+NLQNFLKMISGSYVPAL+GQKI Y+DPVLFLDTGIWHPLAPCMYDDV
Sbjct: 240  ILSLQFWLGGSPENLQNFLKMISGSYVPALKGQKIGYSDPVLFLDTGIWHPLAPCMYDDV 299

Query: 298  KEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIF 357
            KEYLNWYGTRKD NEKLK P+APVIGL+LQRSHIVTGDD HYVAVIMELEARGAKVIPIF
Sbjct: 300  KEYLNWYGTRKDANEKLKSPEAPVIGLVLQRSHIVTGDDGHYVAVIMELEARGAKVIPIF 359

Query: 358  AGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYIV 417
            AGGLDF+GPVERF +DPV KKPMVNS +SLTGFALVGGPARQDHPRA+EAL KLDVPYIV
Sbjct: 360  AGGLDFSGPVERFLIDPVTKKPMVNSVVSLTGFALVGGPARQDHPRAVEALSKLDVPYIV 419

Query: 418  ALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHALHKRVE 477
            ALPLVFQTTEEWL STLGLHPIQVALQVALPELDGG              K+HALHKRVE
Sbjct: 420  ALPLVFQTTEEWLKSTLGLHPIQVALQVALPELDGG--------------KSHALHKRVE 465

Query: 478  QLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGY 537
            QLCTRAIRWGELKRK+KAEKKLAITVFSFPPDKGN+GTAAYLNVFSSIFSVLKDL+RDGY
Sbjct: 466  QLCTRAIRWGELKRKSKAEKKLAITVFSFPPDKGNVGTAAYLNVFSSIFSVLKDLKRDGY 525

Query: 538  NVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWGKPPGN 597
            NVEGLPETS+ALIEE+IHDKEAQFSSPNLNIAYKMGVREYQ+LTPYATALEENWGKPPGN
Sbjct: 526  NVEGLPETSDALIEEVIHDKEAQFSSPNLNIAYKMGVREYQNLTPYATALEENWGKPPGN 585

Query: 598  LNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKA 657
            LNSDGENLLVYGKQYGN+FIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKA
Sbjct: 586  LNSDGENLLVYGKQYGNIFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKA 645

Query: 658  DAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANT 717
            DAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANT
Sbjct: 646  DAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANT 705

Query: 718  ISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVELPD 777
            ISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVELPD
Sbjct: 706  ISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVELPD 765

Query: 778  EGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPED 837
            EG EISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSA+EAVATLVNIAALDRPED
Sbjct: 766  EGEEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSAMEAVATLVNIAALDRPED 825

Query: 838  EIASLPSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTNKKGQV 897
            EI+SLPSILAETVGR+IED+YRGS+KGILKDVELL+QITEASRGAISAFVE+TTN KGQV
Sbjct: 826  EISSLPSILAETVGRNIEDVYRGSNKGILKDVELLKQITEASRGAISAFVERTTNNKGQV 885

Query: 898  VDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNELGSLK 957
            V+V+DKL+SILGFG+NEPWIQYLSNTKFYRADR  LR LF+F+GECLKLVVADNELGSLK
Sbjct: 886  VNVSDKLTSILGFGVNEPWIQYLSNTKFYRADREKLRVLFQFLGECLKLVVADNELGSLK 945

Query: 958  QALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIERQKVD 1017
            QAL GKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAK+VVDRL+ERQK D
Sbjct: 946  QALGGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKIVVDRLVERQKAD 1005

Query: 1018 NGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRPR 1077
            NGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRP+SDTFGRVNRVEPVSLEELGRPR
Sbjct: 1006 NGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPISDTFGRVNRVEPVSLEELGRPR 1065

Query: 1078 IDVVVNCSGVFRDLFINQV-LFTVAISCPTEL 1108
            IDVVVNCSGVFRDLFINQ+ L   A+    EL
Sbjct: 1066 IDVVVNCSGVFRDLFINQMNLLDRAVKMVAEL 1097

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|356534764\|ref\|XP_003535922.1\| PREDICTED: magnesium-chelatase subunit H-like [Glycine max]	Back alignment and taxonomy information

>gi\|225441836\|ref\|XP_002284078.1\| PREDICTED: magnesium-chelatase subunit H [Vitis vinifera]	Back alignment and taxonomy information

>gi\|351726696\|ref\|NP_001237903.1\| magnesium chelatase subunit [Glycine max] gi\|3059095\|emb\|CAA04526.1\| magnesium chelatase subunit [Glycine max]	Back alignment and taxonomy information

>gi\|291419594\|gb\|ADE05291.1\| magnesium chelatase H subunit [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356572030\|ref\|XP_003554173.1\| PREDICTED: magnesium-chelatase subunit H-like isoform 1 [Glycine max]	Back alignment and taxonomy information

>gi\|338173747\|gb\|AEI83420.1\| magnesium chelatase H subunit [Camellia sinensis]	Back alignment and taxonomy information

>gi\|345114263\|gb\|AEN74910.1\| magnesium chelatase H subunit [Fragaria x ananassa]	Back alignment and taxonomy information

>gi\|449463350\|ref\|XP_004149397.1\| PREDICTED: magnesium-chelatase subunit ChlH, chloroplastic-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449503798\|ref\|XP_004162182.1\| PREDICTED: magnesium-chelatase subunit ChlH, chloroplastic-like [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1117
TAIR\|locus:2173234		1381	GUN5 "GENOMES UNCOUPLED 5" [Ar	0.990	0.800	0.865	0.0
TIGR_CMR\|SPO_2863		1097	SPO_2863 "cobN protein" [Ruege	0.422	0.430	0.265	1.6e-59
UNIPROTKB\|O53498		1194	cobN "Cobaltochelatase, CobN s	0.238	0.222	0.307	2.7e-53

TAIR\|locus:2173234 GUN5 "GENOMES UNCOUPLED 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 4988 (1760.9 bits), Expect = 0., P = 0.
 Identities = 963/1113 (86%), Positives = 1037/1113 (93%)

Query:     1 MASLVSSAFTL---KPDQLSSHSQKHYFLHSFLPRKANYQIHSKYPLKVKCAVVGNGLFT 57
             MASLV S FTL   K + LSS +      HSFL +K      +K   KVK AV GNGLFT
Sbjct:     1 MASLVYSPFTLSTSKAEHLSSLTNSTK--HSFLRKKHRSTKPAKSFFKVKSAVSGNGLFT 58

Query:    58 QTSPEVRRIVPENRDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEE 117
             QT+PEVRRIVP  RDN+PTVKIVYVVLEAQYQS+LS AVQ+LN+   +ASYEVVGYLVEE
Sbjct:    59 QTNPEVRRIVPIKRDNVPTVKIVYVVLEAQYQSSLSEAVQSLNKTSRFASYEVVGYLVEE 118

Query:   118 LRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRL 177
             LRD +TY  FC+DL++ANIFIGSLIFVEELA+K+K AVEKERDR+DAVLVFPSMPEVMRL
Sbjct:   119 LRDKNTYNNFCEDLKDANIFIGSLIFVEELAIKVKDAVEKERDRMDAVLVFPSMPEVMRL 178

Query:   178 NKLGSFSMSQLGQSKSPFFQLFKKKKQG-AGFADSMLKLVRTLPKVLKYLPSDKAQDARL 236
             NKLGSFSMSQLGQSKSPFFQLFK+KKQG AGFADSMLKLVRTLPKVLKYLPSDKAQDARL
Sbjct:   179 NKLGSFSMSQLGQSKSPFFQLFKRKKQGSAGFADSMLKLVRTLPKVLKYLPSDKAQDARL 238

Query:   237 YILSLQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCMYDD 296
             YILSLQFWLGGSPDNLQNF+KMISGSYVPAL+G KIEY+DPVLFLDTGIWHPLAP MYDD
Sbjct:   239 YILSLQFWLGGSPDNLQNFVKMISGSYVPALKGVKIEYSDPVLFLDTGIWHPLAPTMYDD 298

Query:   297 VKEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPI 356
             VKEY NWY TR+DTN+ LK  DA V+GL+LQRSHIVTGDDSHYVAVIMELEARGAKV+PI
Sbjct:   299 VKEYWNWYDTRRDTNDSLKRKDATVVGLVLQRSHIVTGDDSHYVAVIMELEARGAKVVPI 358

Query:   357 FAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYI 416
             FAGGLDF+GPVE++FVDPV K+P+VNSA+SLTGFALVGGPARQDHPRAIEAL+KLDVPY+
Sbjct:   359 FAGGLDFSGPVEKYFVDPVSKQPIVNSAVSLTGFALVGGPARQDHPRAIEALKKLDVPYL 418

Query:   417 VALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHALHKRV 476
             VA+PLVFQTTEEWLNSTLGLHPIQVALQVALPELDG +EPIVFAGRDPRTGK+HALHKRV
Sbjct:   419 VAVPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGAMEPIVFAGRDPRTGKSHALHKRV 478

Query:   477 EQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDG 536
             EQLC RAIRWGELKRKTKAEKKLAITVFSFPPDKGN+GTAAYLNVF+SIFSVL+DL+RDG
Sbjct:   479 EQLCIRAIRWGELKRKTKAEKKLAITVFSFPPDKGNVGTAAYLNVFASIFSVLRDLKRDG 538

Query:   537 YNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWGKPPG 596
             YNVEGLPE +E LIEEIIHDKEAQFSSPNLN+AYKMGVREYQ LTPYA ALEENWGKPPG
Sbjct:   539 YNVEGLPENAETLIEEIIHDKEAQFSSPNLNVAYKMGVREYQDLTPYANALEENWGKPPG 598

Query:   597 NLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFK 656
             NLNSDGENLLVYGK YGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYS+VEKIFK
Sbjct:   599 NLNSDGENLLVYGKAYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSYVEKIFK 658

Query:   657 ADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYAN 716
             ADAVLHFGTHGSLEFMPGKQVGMSD C+PDSLIGNIPNVYYYAANNPSEATIAKRRSYAN
Sbjct:   659 ADAVLHFGTHGSLEFMPGKQVGMSDACFPDSLIGNIPNVYYYAANNPSEATIAKRRSYAN 718

Query:   717 TISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVELP 776
             TISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDV+LP
Sbjct:   719 TISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVDLP 778

Query:   777 DEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPE 836
             DEG E+S K+RD VVGKVYSKIMEIESRLLPCGLHVIGEPPSA+EAVATLVNIAALDRPE
Sbjct:   779 DEGLELSPKDRDSVVGKVYSKIMEIESRLLPCGLHVIGEPPSAMEAVATLVNIAALDRPE 838

Query:   837 DEIASLPSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTNKKGQ 896
             DEI++LPSILAE VGR+IED+YRGSDKGIL DVELL++IT+ASRGA+SAFVEKTTN KGQ
Sbjct:   839 DEISALPSILAECVGREIEDVYRGSDKGILSDVELLKEITDASRGAVSAFVEKTTNSKGQ 898

Query:   897 VVDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNELGSL 956
             VVDV+DKL+S+LGFGINEPW++YLSNTKFYRA+R  LRT+F F+GECLKLVV DNELGSL
Sbjct:   899 VVDVSDKLTSLLGFGINEPWVEYLSNTKFYRANRDKLRTVFGFLGECLKLVVMDNELGSL 958

Query:   957 KQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIERQKV 1016
              QALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAM SAK+VV+RL+ERQK+
Sbjct:   959 MQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMASAKIVVERLVERQKL 1018

Query:  1017 DNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRP 1076
             +N GKYPET+ALVLWGTDNIKTYGESL QVLWMIGVRP++DTFGRVNRVEPVSLEELGRP
Sbjct:  1019 ENEGKYPETIALVLWGTDNIKTYGESLGQVLWMIGVRPIADTFGRVNRVEPVSLEELGRP 1078

Query:  1077 RIDVVVNCSGVFRDLFINQV-LFTVAISCPTEL 1108
             RIDVVVNCSGVFRDLFINQ+ L   AI    EL
Sbjct:  1079 RIDVVVNCSGVFRDLFINQMNLLDRAIKMVAEL 1111

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0015995 "chlorophyll biosynthetic process" evidence=IEA

GO:0016851 "magnesium chelatase activity" evidence=IEA;ISS

GO:0009706 "chloroplast inner membrane" evidence=NAS

GO:0005739 "mitochondrion" evidence=IDA

GO:0010007 "magnesium chelatase complex" evidence=TAS

GO:0019684 "photosynthesis, light reaction" evidence=RCA

TIGR_CMR\|SPO_2863 SPO_2863 "cobN protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)]	Back alignment and assigned GO terms

UNIPROTKB\|O53498 cobN "Cobaltochelatase, CobN subunit" [Mycobacterium tuberculosis H37Rv (taxid:83332)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FNB0	CHLH_ARATH	6, ., 6, ., 1, ., 1	0.8652	0.9901	0.8008	yes	no
B8ANF1	CHLH_ORYSI	6, ., 6, ., 1, ., 1	0.8334	0.9919	0.7988	N/A	no
Q10M50	CHLH_ORYSJ	6, ., 6, ., 1, ., 1	0.8307	0.9919	0.7988	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	6.6.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	CHLH	SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (1390 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00018037001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (328 aa)	•	•	•	•	•	0.998
	GSVIVG00002992001	SubName- Full=Chromosome chr10 scaffold_138, whole genome shotgun sequence; (289 aa)	•	•	•		•	0.982
	GSVIVG00022232001	SubName- Full=Chromosome chr6 scaffold_25, whole genome shotgun sequence; (747 aa)	•	•	•		•	0.978
	GSVIVG00028229001	SubName- Full=Chromosome chr7 scaffold_42, whole genome shotgun sequence; (549 aa)			•	•	•	0.964
	GSVIVG00032163001	RecName- Full=Ferrochelatase; EC=4.99.1.1;; Catalyzes the ferrous insertion into protoporphyrin [...] (422 aa)			•	•	•	0.963
	GSVIVG00019218001	RecName- Full=Ferrochelatase; EC=4.99.1.1;; Catalyzes the ferrous insertion into protoporphyrin [...] (475 aa)			•	•	•	0.960
	GSVIVG00023347001	SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (402 aa)	•	•	•		•	0.941
	GSVIVG00020543001	SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (504 aa)				•	•	0.929
	GSVIVG00038863001	SubName- Full=Chromosome chr8 scaffold_99, whole genome shotgun sequence; (370 aa)	•	•	•		•	0.924
	GSVIVG00001938001	SubName- Full=Chromosome chr5 scaffold_124, whole genome shotgun sequence; (229 aa)			•		•	0.819

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1117
PLN03069		1220	PLN03069, PLN03069, magnesiumprotoporphyrin-IX che	0.0
PRK12493		1310	PRK12493, PRK12493, magnesium chelatase subunit H;	0.0
TIGR02025		1224	TIGR02025, BchH, magnesium chelatase, H subunit	0.0
pfam02514		1079	pfam02514, CobN-Mg_chel, CobN/Magnesium Chelatase	0.0
COG1429		1388	COG1429, CobN, Cobalamin biosynthesis protein CobN	0.0
PRK13405		1209	PRK13405, bchH, magnesium chelatase subunit H; Pro	0.0
cd10150		910	cd10150, CobN_like, CobN subunit of cobaltochelata	0.0
PRK05989		1244	PRK05989, cobN, cobaltochelatase subunit CobN; Rev	0.0
PLN03241		1315	PLN03241, PLN03241, magnesium chelatase subunit H;	6e-91
TIGR02257		1122	TIGR02257, cobalto_cobN, cobaltochelatase, CobN su	3e-80
TIGR02025		1224	TIGR02025, BchH, magnesium chelatase, H subunit	2e-72
cd10150		910	cd10150, CobN_like, CobN subunit of cobaltochelata	6e-67
PRK12321		1100	PRK12321, cobN, cobaltochelatase subunit CobN; Rev	5e-62
pfam11965		164	pfam11965, DUF3479, Domain of unknown function (DU	5e-57
PRK13405		1209	PRK13405, bchH, magnesium chelatase subunit H; Pro	5e-49
PLN03241		1315	PLN03241, PLN03241, magnesium chelatase subunit H;	3e-43
TIGR02257		1122	TIGR02257, cobalto_cobN, cobaltochelatase, CobN su	4e-33
PRK12321		1100	PRK12321, cobN, cobaltochelatase subunit CobN; Rev	2e-31

>gnl\|CDD\|215557 PLN03069, PLN03069, magnesiumprotoporphyrin-IX chelatase subunit H; Provisional	Back alignment and domain information

 Score = 2193 bits (5685), Expect = 0.0
 Identities = 897/1043 (86%), Positives = 968/1043 (92%), Gaps = 1/1043 (0%)

Query: 55   LFTQTSPEVRRIVPENRDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYL 114
            LFTQT+PEVRRIVPE+R   PTVK+VYVVLEAQYQS+LSAAVQ LN       +EVVGYL
Sbjct: 1    LFTQTNPEVRRIVPEDRRGRPTVKVVYVVLEAQYQSSLSAAVQNLNATSRKVCFEVVGYL 60

Query: 115  VEELRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEV 174
            VEELRD D Y+TF KD+E+ANIFIGSLIFVEELA K+K AVE ERDRLDAVLVFPSMPEV
Sbjct: 61   VEELRDADNYETFKKDVEDANIFIGSLIFVEELAEKVKEAVEPERDRLDAVLVFPSMPEV 120

Query: 175  MRLNKLGSFSMSQLGQSKSPFFQLFKKKKQGAG-FADSMLKLVRTLPKVLKYLPSDKAQD 233
            MRLNKLGSFSMSQLGQSKS F Q  KKKKQ  G F + MLKLVRTLPKVLKYLPSDKAQD
Sbjct: 121  MRLNKLGSFSMSQLGQSKSAFAQFMKKKKQENGGFEEGMLKLVRTLPKVLKYLPSDKAQD 180

Query: 234  ARLYILSLQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCM 293
            AR +++SLQFWLGGSPDNL+NFL MISGSYVPAL+G KIEYADPVLFLDTGIWHPLAP M
Sbjct: 181  ARNFMMSLQFWLGGSPDNLENFLLMISGSYVPALKGVKIEYADPVLFLDTGIWHPLAPTM 240

Query: 294  YDDVKEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKV 353
            Y+DVKEYLNWY TR+D N  LK  DAPV+GL+LQRSHIVTGDD HYVAV+MELEARGAKV
Sbjct: 241  YEDVKEYLNWYDTRRDMNFALKDKDAPVVGLVLQRSHIVTGDDGHYVAVVMELEARGAKV 300

Query: 354  IPIFAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDV 413
            +PIFAGGLDF+GPVERFF DP+ KKP+V+S +SLTGFALVGGPARQDHP+AIEAL+KLDV
Sbjct: 301  VPIFAGGLDFSGPVERFFYDPITKKPIVDSVVSLTGFALVGGPARQDHPKAIEALKKLDV 360

Query: 414  PYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHALH 473
            PY+VALPLVFQTTEEWL+STLGLHPIQVALQVALPELDGGLEPIVFAGRD RTGK+HALH
Sbjct: 361  PYLVALPLVFQTTEEWLDSTLGLHPIQVALQVALPELDGGLEPIVFAGRDSRTGKSHALH 420

Query: 474  KRVEQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQ 533
             RVEQLCTRAI+W  LKRKTKAEKKLAITVFSFPPDKGN+GTAAYLNVF SIFSVLKDL+
Sbjct: 421  DRVEQLCTRAIKWANLKRKTKAEKKLAITVFSFPPDKGNVGTAAYLNVFGSIFSVLKDLK 480

Query: 534  RDGYNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWGK 593
            RDGYNV GLPET EALIE ++HDKEA+FSSPNLN+AYKM VREYQ LTPYA ALEENWGK
Sbjct: 481  RDGYNVGGLPETEEALIESVLHDKEAKFSSPNLNVAYKMSVREYQKLTPYAEALEENWGK 540

Query: 594  PPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEK 653
            PPGNLNSDG+NLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYY+F+EK
Sbjct: 541  PPGNLNSDGQNLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYTFLEK 600

Query: 654  IFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRS 713
            IFKADAVLHFGTHGSLEFMPGKQVGMSD CYPDSLIGNIPNVYYYAANNPSEATIAKRRS
Sbjct: 601  IFKADAVLHFGTHGSLEFMPGKQVGMSDACYPDSLIGNIPNVYYYAANNPSEATIAKRRS 660

Query: 714  YANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDV 773
            YANTISYLTPPAENAGLYKGLKQLSELISSYQSLKD+GRGPQIVSSIISTAKQCNLDKDV
Sbjct: 661  YANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDSGRGPQIVSSIISTAKQCNLDKDV 720

Query: 774  ELPDEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALD 833
            +LP+E AE+SA ERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSA EAVATLVNIAALD
Sbjct: 721  DLPEEAAELSADERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSAEEAVATLVNIAALD 780

Query: 834  RPEDEIASLPSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTNK 893
            RPED I+ LP ILAE VGR+IED+YRG+DKGIL DVELL++ITEASR A+ AFVEKTTN 
Sbjct: 781  RPEDNISGLPGILAEAVGREIEDVYRGNDKGILADVELLQEITEASRAAVRAFVEKTTNS 840

Query: 894  KGQVVDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNEL 953
            KGQVV+VA+KL+S+LGFG+ EPW++ LSNTKFY ADR  LRTLF+F+G CLK VVADNEL
Sbjct: 841  KGQVVNVANKLTSLLGFGVKEPWVEALSNTKFYDADREKLRTLFDFLGFCLKQVVADNEL 900

Query: 954  GSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIER 1013
            G LK+ALEG+YVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAA+ SAKVVVDRL+ER
Sbjct: 901  GGLKEALEGQYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAALASAKVVVDRLLER 960

Query: 1014 QKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEEL 1073
            QK +NGGKYPET+ALVLWGTDNIKTYGESLAQVLWM+GVRPV+D  GRVN+VEPVSLEEL
Sbjct: 961  QKDENGGKYPETIALVLWGTDNIKTYGESLAQVLWMVGVRPVADALGRVNKVEPVSLEEL 1020

Query: 1074 GRPRIDVVVNCSGVFRDLFINQV 1096
            GRPRIDVVVNCSGVFRDLFINQ+
Sbjct: 1021 GRPRIDVVVNCSGVFRDLFINQM 1043

Length = 1220

>gnl\|CDD\|237117 PRK12493, PRK12493, magnesium chelatase subunit H; Provisional	Back alignment and domain information

>gnl\|CDD\|233690 TIGR02025, BchH, magnesium chelatase, H subunit	Back alignment and domain information

>gnl\|CDD\|217077 pfam02514, CobN-Mg_chel, CobN/Magnesium Chelatase	Back alignment and domain information

>gnl\|CDD\|224346 COG1429, CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases [Coenzyme metabolism]	Back alignment and domain information

>gnl\|CDD\|237377 PRK13405, bchH, magnesium chelatase subunit H; Provisional	Back alignment and domain information

>gnl\|CDD\|199903 cd10150, CobN_like, CobN subunit of cobaltochelatase, bchH and chlH subunits of magnesium chelatases, and similar proteins	Back alignment and domain information

>gnl\|CDD\|235663 PRK05989, cobN, cobaltochelatase subunit CobN; Reviewed	Back alignment and domain information

>gnl\|CDD\|215643 PLN03241, PLN03241, magnesium chelatase subunit H; Provisional	Back alignment and domain information

>gnl\|CDD\|131310 TIGR02257, cobalto_cobN, cobaltochelatase, CobN subunit	Back alignment and domain information

>gnl\|CDD\|233690 TIGR02025, BchH, magnesium chelatase, H subunit	Back alignment and domain information

>gnl\|CDD\|199903 cd10150, CobN_like, CobN subunit of cobaltochelatase, bchH and chlH subunits of magnesium chelatases, and similar proteins	Back alignment and domain information

>gnl\|CDD\|237056 PRK12321, cobN, cobaltochelatase subunit CobN; Reviewed	Back alignment and domain information

>gnl\|CDD\|221345 pfam11965, DUF3479, Domain of unknown function (DUF3479)	Back alignment and domain information

>gnl\|CDD\|237377 PRK13405, bchH, magnesium chelatase subunit H; Provisional	Back alignment and domain information

>gnl\|CDD\|215643 PLN03241, PLN03241, magnesium chelatase subunit H; Provisional	Back alignment and domain information

>gnl\|CDD\|131310 TIGR02257, cobalto_cobN, cobaltochelatase, CobN subunit	Back alignment and domain information

>gnl\|CDD\|237056 PRK12321, cobN, cobaltochelatase subunit CobN; Reviewed	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1117
PLN03069		1220	magnesiumprotoporphyrin-IX chelatase subunit H; Pr	100.0
PRK12493		1310	magnesium chelatase subunit H; Provisional	100.0
TIGR02025		1216	BchH magnesium chelatase, H subunit. This model re	100.0
PRK13405		1209	bchH magnesium chelatase subunit H; Provisional	100.0
PLN03241		1353	magnesium chelatase subunit H; Provisional	100.0
PRK05989		1244	cobN cobaltochelatase subunit CobN; Reviewed	100.0
PF02514		1098	CobN-Mg_chel: CobN/Magnesium Chelatase; InterPro:	100.0
TIGR02257		1122	cobalto_cobN cobaltochelatase, CobN subunit.	100.0
PRK12321		1100	cobN cobaltochelatase subunit CobN; Reviewed	100.0
COG1429		1388	CobN Cobalamin biosynthesis protein CobN and relat	100.0
PF11965		164	DUF3479: Domain of unknown function (DUF3479); Int	100.0

>PLN03069 magnesiumprotoporphyrin-IX chelatase subunit H; Provisional	Back alignment and domain information

Probab=100.00  E-value=3.7e-281  Score=2614.07  Aligned_cols=1062  Identities=85%  Similarity=1.315  Sum_probs=985.0

Q ss_pred             ceeecCccccccccCCCCCCCcEEEEEEEcccchhHHHHHHHHHHHhccCCccEEEEEehhhhcCChhhHHHHHHHhhcC
Q 001237           55 LFTQTSPEVRRIVPENRDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEELRDVDTYKTFCKDLENA  134 (1117)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a  134 (1117)
                      |||+++++.||++|+..+||..||||+||+++|+++++++|++.|+++++++.++||+|+++++++++.+++|++||++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~a~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~a   80 (1220)
T PLN03069          1 LFTQTNPEVRRIVPEDRRGRPTVKVVYVVLEAQYQSSLSAAVQNLNATSRKVCFEVVGYLVEELRDADNYETFKKDVEDA   80 (1220)
T ss_pred             CCCcccccccccCccccCCcceEEEEEEEchHHhHHHHHHHHHHhhhcCCCceEEEEEeehhhccCchhHHHHHHHHhcC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CEEEEeccccHHHHHHHHHHHHHhhcCcCEEEecCChHHHHHhhccCcccccccCCCCchHHHHHHhhhcC-CCcHHHHH
Q 001237          135 NIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKKKKQG-AGFADSML  213 (1117)
Q Consensus       135 di~~~sllf~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~tr~G~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  213 (1117)
                      ||||+||||++|+++|+.++|++++++||++|||+|+||+|++||||+|+|++++++++.+++++||.+.. .+++++|+
T Consensus        81 d~~~~sl~f~~~~~~~~~~~l~~~~~~~~~~~~~~s~~e~~~ltr~G~f~m~~~~~~~~~~~~~~k~~~~~~~~~~~~~~  160 (1220)
T PLN03069         81 NIFIGSLIFVEELAEKVKEAVEPERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSAFAQFMKKKKQENGGFEEGML  160 (1220)
T ss_pred             CEEEEecccchhhHHHHHHHHHHhhcCCCeEEEEechHHHHHHhcccceecccccCCCcchhHHHHhhhhccCchHHHHH
Confidence            99999999999999999999999999999999999999999999999999998778888889999996422 23678999


Q ss_pred             HHHHhCCCeEEEcCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHHHHhccCccccCCCcCCCCcccccccccccCCCCCC
Q 001237          214 KLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCM  293 (1117)
Q Consensus       214 ~~~~~~~~~l~~lpg~~~~d~~~~~~~~~Y~~~Gg~eN~~~ll~~l~~~y~~~~~g~~~~~~~P~~~P~~GiyHP~~~~~  293 (1117)
                      +++|++||+|+||||+|+||+|+|+.+++||.+||.||++|||+||+++|++++.+..++++||+++|+.|||||+++.+
T Consensus       161 ~~~~~~~k~l~~iP~~~~~D~r~~~~~~~Y~~~Gg~eN~~n~l~~l~~~y~~~~~~~~~~~~~P~~~P~~GiyHPd~~~~  240 (1220)
T PLN03069        161 KLVRTLPKVLKYLPSDKAQDARNFMMSLQFWLGGSPDNLENFLLMISGSYVPALKGVKIEYADPVLFLDTGIWHPLAPTM  240 (1220)
T ss_pred             HHHHhhhhceeecCCCchhCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhhhccCCCCCCCchhccccEeeCCCCccc
Confidence            99999999999999999999999999999999999999999999999999855445457889999999999999999999


Q ss_pred             cCCHHHHHHHhccCCCCccccCCCCCCeEEEEeeccccccCCChHHHHHHHHHHHcCCcEEEEEcCCCCCchhhhhhhcc
Q 001237          294 YDDVKEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERFFVD  373 (1117)
Q Consensus       294 f~~~~~Y~~Wy~~~~~~~~~~~~~~~p~Vgil~yrs~~~~g~~~~~dalI~aLE~~Gl~vipvf~~gl~~~~~v~~~f~~  373 (1117)
                      |+++++|++||+++.+...+.+++++|||||||||+|+++||++|+|+||++||++|+||+|||++|++++.++++||++
T Consensus       241 f~~~~~yl~w~~~~~~~~~~~y~~~~p~Vgil~~r~~~~~~~~~~idalI~~LE~~G~~vipvf~~gl~~~~~~~~~~~~  320 (1220)
T PLN03069        241 YEDVKEYLNWYDTRRDMNFALKDKDAPVVGLVLQRSHIVTGDDGHYVAVVMELEARGAKVVPIFAGGLDFSGPVERFFYD  320 (1220)
T ss_pred             cCCHHHHHHHHhhcccccccccCCCCCEEEEEechhhhhcCCcHHHHHHHHHHHHCCCeEEEEEecCccccchHHHHHHh
Confidence            99999999999765332222355779999999999999999999999999999999999999999999988899999875


Q ss_pred             ccCCCcceeEEEecccccccCCCCCCCchhHHHHhhhCCCcEEeEecCCCCCHHHHhcCCCCCChhhhhhheeccccCcc
Q 001237          374 PVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGG  453 (1117)
Q Consensus       374 ~~~~~~~vDaiIn~tgF~L~ggpa~~~~~~~~~~L~~LnVPvl~ai~l~~qt~eeW~~s~~GL~p~~~~~~ValPElDG~  453 (1117)
                      ...+++.||+|||+|||+|+|||++++.++++++|++|||||||++++++||.++|++|++||+|+|++|+|+||||||+
T Consensus       321 ~~~~~~~vDaiIn~tgF~L~ggpa~~~~~~a~~~L~~lnVPvl~~~~l~~qt~e~W~~s~~Gl~p~~~~~~ValPElDG~  400 (1220)
T PLN03069        321 PITKKPIVDSVVSLTGFALVGGPARQDHPKAIEALKKLDVPYLVALPLVFQTTEEWLDSTLGLHPIQVALQVALPELDGG  400 (1220)
T ss_pred             hhcCCCCccEEEECCcccccCCcccccchhhHHHHHHCCCCEEEEEecCCCCHHHHHhCCCCCCHHHhhheeechhhCCc
Confidence            33578899999999999999999999888899999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEEEeecCCCCccccchHHHHHHHHHHHHHHHcccCCCCCceEEEEeecCCCCCCCccccCCCChHHHHHHHHHHHH
Q 001237          454 LEPIVFAGRDPRTGKAHALHKRVEQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQ  533 (1117)
Q Consensus       454 I~piv~~~~~~~~~~~~pipeRi~~la~ra~~W~~LR~kpnaeKKVAIil~nyPp~~g~iGtAa~LDv~~Sl~~iL~~Lk  533 (1117)
                      |+|++|||++..++.++|+||||+++|+|+++|++||+|||+||||||||||||||++|+|||+|||||+||++||++||
T Consensus       401 I~piv~~g~~~~~~~~~pi~eRie~la~r~~~w~~Lr~k~n~eKKVAIil~nyPpg~g~iGtAa~LDv~~Sl~~iL~~Lk  480 (1220)
T PLN03069        401 LEPIVFAGRDSRTGKSHALHDRVEQLCTRAIKWANLKRKTKAEKKLAITVFSFPPDKGNVGTAAYLNVFGSIFSVLKDLK  480 (1220)
T ss_pred             eeeEEEEEEecCCCceecCHHHHHHHHHHHHHHHHHccCChhhCEEEEEecCCCCCCCccccccccChHHHHHHHHHHHH
Confidence            99999999987778899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HCCCCCCCCCCCHHHHHHHHHhccccccCCCCcccccccCHHHHhhhhHHHHHHHHHhCCCCCCCCCCCCeEEEeeeeec
Q 001237          534 RDGYNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWGKPPGNLNSDGENLLVYGKQYG  613 (1117)
Q Consensus       534 ~~GY~v~~~P~~~~~L~~~ll~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~i~~~WG~pPG~~~~~g~~~~I~G~~fG  613 (1117)
                      ++||+|+++|+|+++|+++|++++...|.+.+.+++..+|+++|++|++++++|+++||+|||+++++|++|+|||++||
T Consensus       481 ~~GY~v~~lP~~~~~L~~~l~~~~~~~~~~~~~~~~~~v~~~~Y~~~~~~~~~i~~~WG~~pG~~~~~g~~~~I~G~~fG  560 (1220)
T PLN03069        481 RDGYNVGGLPETEEALIESVLHDKEAKFSSPNLNVAYKMSVREYQKLTPYAEALEENWGKPPGNLNSDGQNLLVYGKQYG  560 (1220)
T ss_pred             HCCCCcCCCCCCHHHHHHHHHhccccCcCCcccccccccCHHHHHHHHHHHHHHHHHhCCCCCCcCCCCCeEEEeeeeeC
Confidence            99999999999999999999998777887776677788999999999999999999999999999999988999999999


Q ss_pred             cEEEEeCCCCCCCCCcccccCCCCCCCCchhHHHHHHHhhhcCCcEEEEecCCCcCCCCCCCccCCCCCCcchhhcCCCC
Q 001237          614 NVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIP  693 (1117)
Q Consensus       614 NVfIgvQP~RG~~~Dp~~l~Hd~~lpP~HqYlAfY~WL~~~F~ADAvvH~GtHGtLEwLPGK~vGLS~~cwPd~liGdlP  693 (1117)
                      ||||||||+|||++|||++|||+++||||||+|||+||+++|+||||||||||||||||||||+|||++||||+|||+||
T Consensus       561 NVfIgvQP~rG~~~dp~~lyhd~~~pP~HqYlAfY~WL~~~F~ADAviH~GtHGtlEwLPGK~vGLS~~cwPd~liGdlP  640 (1220)
T PLN03069        561 NVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYTFLEKIFKADAVLHFGTHGSLEFMPGKQVGMSDACYPDSLIGNIP  640 (1220)
T ss_pred             CEEEEcCCCCccCCCchhhhcCCCCCCChhHHHHHHHHHhhcCCCEEEEcCCCCCcccCCCccccCCcccChHHHhCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEecCCcchhhHHhhcccccccccCCCCCcCCCCchHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHcCCcccC
Q 001237          694 NVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDV  773 (1117)
Q Consensus       694 niYpYivnnPgEg~~AKRR~~AviIsHLtPP~~~AgLY~~L~eL~~li~eY~~~~~~~~~~~l~~~I~e~a~~~~L~~dl  773 (1117)
                      |||||||||||||+||||||||||||||||||++||||++|++|+++|++|+++.++.++..+++.|+++|+++||+.|+
T Consensus       641 niY~Y~vnNPgEg~~AKRR~~AviIsHLtPP~~~AgLY~~L~~L~~li~eY~~~~~~~~~~~l~~~I~~~a~~l~L~~dl  720 (1220)
T PLN03069        641 NVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDSGRGPQIVSSIISTAKQCNLDKDV  720 (1220)
T ss_pred             EEeEEeCCCcchHHHHHhcccceeeecCCCCcccccccHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHcCCchhc
Confidence            99999999999999999999999999999999999999999999999999999888878889999999999999999999


Q ss_pred             CCCcccccCChhHHhHHHHHHHHHHHHHHhccCCCCceecCCCCChHHHHHHHHHHHhcCCCcccccchhHHHHHHhCCC
Q 001237          774 ELPDEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDEIASLPSILAETVGRD  853 (1117)
Q Consensus       774 ~~~~~~~~~~~~~~d~~v~~l~~yL~el~~~~ip~GLHv~G~~p~~e~~~~~l~~i~~~~r~~~~~~sL~~~la~~~g~d  853 (1117)
                      +++.....++.+++++++++||+||||||+++||+||||||++|++|++++++.+|++++|++.++.||++++++.+|++
T Consensus       721 ~~~~~~~~~~~~~~~~~~~~l~~yL~el~~~~Ip~GLHv~G~~p~~e~l~~~l~~i~~~~~~~~~~~sl~~~l~~~~g~d  800 (1220)
T PLN03069        721 DLPEEAAELSADERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSAEEAVATLVNIAALDRPEDNISGLPGILAEAVGRE  800 (1220)
T ss_pred             CCCccccccccccHHHHHHHHHHHHHHHHhhhcCCCCeecCCCCChHHHHHHHHHHHhcccccccccchHHHHHHhhccc
Confidence            87654444555678999999999999999999999999999999999999999999999998888899999999999999


Q ss_pred             hhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHhhhccCCCchhhhhhcccccccccHHHH
Q 001237          854 IEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTNKKGQVVDVADKLSSILGFGINEPWIQYLSNTKFYRADRATL  933 (1117)
Q Consensus       854 ~~~l~~~~~~~~~~~~~~l~~i~~~~~~~v~~~~~~~~~~~g~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~l  933 (1117)
                      +++++.+...+..+..++++++.+.++++|+.+++......++..+..+.++..++.+...++...+..........+.+
T Consensus       801 ~~~l~~~~~~~~~~~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  880 (1220)
T PLN03069        801 IEDVYRGNDKGILADVELLQEITEASRAAVRAFVEKTTNSKGQVVNVANKLTSLLGFGVKEPWVEALSNTKFYDADREKL  880 (1220)
T ss_pred             hhhhhcccccccchhHHHHHHHHHHHHHHHHHHhhccccccccchhhhhhhhhhhccccchhhhhhhhcccccccchHHH
Confidence            99999888777777888889999999999999998776666665544444444443222222322222111112234567


Q ss_pred             HHHHHHHHHHHHhhcchhHHHHHHhhhCCCccCCCCCCCCCCCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHH
Q 001237          934 RTLFEFVGECLKLVVADNELGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIER 1013 (1117)
Q Consensus       934 ~~~~~~l~~~~~~~~~~~El~~LL~aL~G~YI~PgpgGdp~R~pdvLPTGRNfys~DP~~iPT~aAw~~G~~lAe~lL~~ 1013 (1117)
                      +.++.++..+..++++++|+++||+||+|+||+|||||||+|||+|||||||||+|||++|||++||++|+++|++||++
T Consensus       881 ~~~~~~~~~~~~~~~~~~El~~LL~AL~G~yI~PgpgGdp~R~pdvLPTGRN~ys~DP~~iPT~aAw~~G~~lA~~lL~~  960 (1220)
T PLN03069        881 RTLFDFLGFCLKQVVADNELGGLKEALEGQYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAALASAKVVVDRLLER  960 (1220)
T ss_pred             HHHHHHHHHHHhhcCChHHHHHHHHHhCCcccCCCCCCccccCCCCCCCCCCccCcCcccCCCHHHHHHHHHHHHHHHHH
Confidence            77888888887777888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCceEEEEEEeccccccCChhHHHHHHHhCCeeeeCCCCCcceeEEecccccCCCcceEEEecCchhhhhHH
Q 001237         1014 QKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFI 1093 (1117)
Q Consensus      1014 y~~e~~G~yPe~va~vLWgtdtmrt~Ge~iAQiL~LlGvrPvwd~~GrV~g~ElIPL~ELgRPRIDVvv~iSGiFRD~Fp 1093 (1117)
                      |+++|||+||||||+||||||||||+|++|||||||||||||||++|||+|+|||||+||||||||||||+||||||+||
T Consensus       961 y~~e~~G~yPe~Ia~vLWgtdtmrt~Ge~iAqiL~LlGvrPvwD~~GrV~g~elIPLeELGRPRIDVvv~iSGiFRD~fp 1040 (1220)
T PLN03069        961 QKDENGGKYPETIALVLWGTDNIKTYGESLAQVLWMVGVRPVADALGRVNKVEPVSLEELGRPRIDVVVNCSGVFRDLFI 1040 (1220)
T ss_pred             HHHHcCCCCCceeEEEEEcHHhhhhCCHHHHHHHHHcCCeeeeCCCCCcCceEEeCHHHcCCCCeeEEEEecchHHHhHH
Confidence            98777799999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHH-------HhccCCCCCCcchhccc
Q 001237         1094 NQVLFT-------VAISCPTELPICTVCYL 1116 (1117)
Q Consensus      1094 ~~i~Ll-------a~~~~~~~~~~~~~~~~ 1116 (1117)
                      |||+||       |+|+||.|+||||||++
T Consensus      1041 ~~i~LlD~Av~~aA~~dEp~e~N~Vrkh~~ 1070 (1220)
T PLN03069       1041 NQMNLLDRAVKMVAELDEPAEMNFVRKHAL 1070 (1220)
T ss_pred             HHHHHHHHHHHHHHhCCCCcccCHHHHHHH
Confidence            999986       88999999999999986

>PRK12493 magnesium chelatase subunit H; Provisional	Back alignment and domain information

>TIGR02025 BchH magnesium chelatase, H subunit	Back alignment and domain information

>PRK13405 bchH magnesium chelatase subunit H; Provisional	Back alignment and domain information

>PLN03241 magnesium chelatase subunit H; Provisional	Back alignment and domain information

>PRK05989 cobN cobaltochelatase subunit CobN; Reviewed	Back alignment and domain information

>PF02514 CobN-Mg_chel: CobN/Magnesium Chelatase; InterPro: IPR003672 This family contains a domain common to the cobN protein and to magnesium protoporphyrin chelatase	Back alignment and domain information

>TIGR02257 cobalto_cobN cobaltochelatase, CobN subunit	Back alignment and domain information

>PRK12321 cobN cobaltochelatase subunit CobN; Reviewed	Back alignment and domain information

>COG1429 CobN Cobalamin biosynthesis protein CobN and related Mg-chelatases [Coenzyme metabolism]	Back alignment and domain information

>PF11965 DUF3479: Domain of unknown function (DUF3479); InterPro: IPR022571 This functionally uncharacterised domain, found N-terminal to PF02514 from PFAM, occurs in magnesium chelatase subunit H, which is involved in chlorophyll biosynthesis	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1117
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 66.8 bits (162), Expect = 3e-11
 Identities = 98/715 (13%), Positives = 189/715 (26%), Gaps = 256/715 (35%)

Query: 59  TSPEVRRIVPENRDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEEL 118
           +  E+  I+   +D +     ++  L ++ +  +   V+ + +  NY       +L+  +
Sbjct: 47  SKEEIDHIIMS-KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRI-NY------KFLMSPI 98

Query: 119 RDVDTYKTFCKDLE-NANIFIGSLIFVEELALKIKAAVEKERDRL-DAVLVFPSMPEVMR 176
           +         +       ++I                  ++RDRL +   VF     V R
Sbjct: 99  KTE------QRQPSMMTRMYI------------------EQRDRLYNDNQVFAKYN-VSR 133

Query: 177 LNKLGSFSMSQLGQSKSPFFQLFKKKK---QG-AGFADSMLKLVRTLPKVLKYLPSDKAQ 232
           L         +L   +    +L   K     G  G   + +         L    S K Q
Sbjct: 134 LQP-----YLKL---RQALLELRPAKNVLIDGVLGSGKTWV--------ALDVCLSYKVQ 177

Query: 233 DARLY-ILSLQFWLG----GSPD----NLQNFLKMISGSYVPALRGQKIEYADPVLFLDT 283
               + I    FWL      SP+     LQ  L  I  ++       + +++  +     
Sbjct: 178 CKMDFKI----FWLNLKNCNSPETVLEMLQKLLYQIDPNWT-----SRSDHSSNI----- 223

Query: 284 GIWHPLAPCMYDDVKEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVI 343
                        ++  L      K     L         L+L         +     V 
Sbjct: 224 -------KLRIHSIQAELRRLLKSKPYENCL---------LVL--------LN-----V- 253

Query: 344 MELEARGAKVIPIFAGG------------LDFAGPVERFFVDPVMKKPMVNSAISLTGFA 391
                + AK    F                DF        +        +      +   
Sbjct: 254 -----QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308

Query: 392 LVGGPARQDHPRAIEALRKLDVPYIVALPLVFQTT-EEWLNSTLG--LHPIQVALQVALP 448
                  QD PR +       +  I         T + W +         I+ +L V   
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV--- 365

Query: 449 ELDGGLEPIVFAGRDPRTGKAHALHKRVEQLCTRAIRWGELKRKTKAEKKLAITVFSFPP 508
                LEP                               E +   K   +L++    FPP
Sbjct: 366 -----LEP------------------------------AEYR---KMFDRLSV----FPP 383

Query: 509 DKGNIGTAAYLNVF------SSIFSVLKDLQRDGYNVEGLPETSEALIEEIIHDKEAQFS 562
              +I     L++       S +  V+  L +             +L+E+    KE+  S
Sbjct: 384 SA-HI-PTILLSLIWFDVIKSDVMVVVNKLHK------------YSLVEK--QPKESTIS 427

Query: 563 SPNLNIAYKMGVREYQSL-----TPYATALE-ENWGKPPGNLNSDGENLLVYGKQYGNVF 616
            P++ +  K+ +    +L       Y      ++    P  L  D      Y   +    
Sbjct: 428 IPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYL--DQ-----YFYSH---- 476

Query: 617 IGVQPTFGY---------EGDPMRLLF------------SKSASPHHG--------FAAY 647
                  G+              R++F              +A    G           Y
Sbjct: 477 ------IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFY 530

Query: 648 YSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNI----PNVYYY 698
             +   I   D       +  L+F+P  ++  + +C   + +  I     +   +
Sbjct: 531 KPY---ICDNDPKYERLVNAILDFLP--KIEENLICSKYTDLLRIALMAEDEAIF 580

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00