Citrus Sinensis ID: 001292
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1106 | ||||||
| 356533887 | 1044 | PREDICTED: uncharacterized protein LOC10 | 0.905 | 0.959 | 0.645 | 0.0 | |
| 356574667 | 1045 | PREDICTED: uncharacterized protein LOC10 | 0.910 | 0.963 | 0.639 | 0.0 | |
| 18414574 | 1050 | UDP-glycosyltransferase family protein [ | 0.923 | 0.972 | 0.612 | 0.0 | |
| 224113167 | 1073 | predicted protein [Populus trichocarpa] | 0.901 | 0.929 | 0.602 | 0.0 | |
| 297810537 | 1051 | hypothetical protein ARALYDRAFT_487229 [ | 0.905 | 0.953 | 0.615 | 0.0 | |
| 225448875 | 1028 | PREDICTED: uncharacterized protein LOC10 | 0.872 | 0.938 | 0.647 | 0.0 | |
| 147820655 | 1037 | hypothetical protein VITISV_036074 [Viti | 0.872 | 0.930 | 0.641 | 0.0 | |
| 334187426 | 1035 | UDP-glycosyltransferase family protein [ | 0.909 | 0.971 | 0.600 | 0.0 | |
| 449441828 | 1034 | PREDICTED: uncharacterized protein LOC10 | 0.915 | 0.979 | 0.607 | 0.0 | |
| 449522726 | 1037 | PREDICTED: uncharacterized protein LOC10 | 0.915 | 0.976 | 0.605 | 0.0 |
| >gi|356533887|ref|XP_003535489.1| PREDICTED: uncharacterized protein LOC100779157 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1302 bits (3370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 667/1033 (64%), Positives = 800/1033 (77%), Gaps = 31/1033 (3%)
Query: 87 RDRFRFKRNPNHTQDKTQTKPSLHRYLLRHRHVNSTPSAANAATSGPRFNRKGFSS-LFP 145
R F FKRNP+H + + S R L N+ ++ N RKG LFP
Sbjct: 28 RGGFPFKRNPSHHRHRG----SFDRQL---PRSNNNSNSNNNINRSHLHKRKGLLLWLFP 80
Query: 146 F-RGAYLLYFMIFLAVFAFAMASMVLQNSIASVFG--AERGRPIREELRFGSRLKFVPDQ 202
F + Y I VF FA+AS+V+Q+SI SVF AER IR +RFGS L+FVP +
Sbjct: 81 FPKSKSGFYAFIIAVVFLFALASLVMQSSITSVFRQRAERASYIRGGIRFGSALRFVPGK 140
Query: 203 VG----FGNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIY 258
+ G+GLD +RS PR GVR PRI LILG+M D +SL+L+TV++NLQKLGYVFKI+
Sbjct: 141 ISQRFLSGDGLDPVRSQPRIGVRAPRIALILGHMTIDPQSLMLVTVIRNLQKLGYVFKIF 200
Query: 259 AVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIP 318
AV G + S+WE I G IS L + LIDWSIF+GII DSLEAK AISS+MQ+PF S+P
Sbjct: 201 AVGHGKARSIWENIGGGISPLSAKHQGLIDWSIFEGIIVDSLEAKVAISSVMQDPFCSVP 260
Query: 319 LVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFV 378
L+WIIQEDSL++RLPVY + G+++++S+W+S FSR V+VFPD+T PMLYS LD GNFFV
Sbjct: 261 LIWIIQEDSLSSRLPVYEQMGWEHIVSHWRSAFSRAGVVVFPDFTYPMLYSELDTGNFFV 320
Query: 379 IPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVG 438
IPGSP DVWA E+YSK+H K QLR+ +GF K++++V+VVGSS FY+ LSWDYAVAMH VG
Sbjct: 321 IPGSPVDVWAAESYSKTHAKDQLRELSGFGKNDMLVLVVGSSVFYDNLSWDYAVAMHSVG 380
Query: 439 PLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVL 498
PLL KYARRN SFKFVFLCGNSTDGY+DALQ VASR+GL + S+RHYG NGDVN VL
Sbjct: 381 PLLTKYARRNGATDSFKFVFLCGNSTDGYDDALQGVASRMGLRQGSIRHYGLNGDVNSVL 440
Query: 499 LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGL 558
LMADI+LYGS+Q QGFP L++RAMTF IPV+ PDF ++K+Y+ +G IFF K NPE L
Sbjct: 441 LMADIILYGSAQEVQGFPPLLIRAMTFEIPVVVPDFSVLKKYIVDGVHGIFFSKHNPEAL 500
Query: 559 SRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPGPI 618
AFSL +SNG+LSKFA+ +AS+GR AKN+LALDC+T YAR+LENVLNFPSDALLPGP+
Sbjct: 501 MNAFSLLLSNGRLSKFAQAIASSGRQLAKNVLALDCITGYARLLENVLNFPSDALLPGPV 560
Query: 619 SQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEE-----FTKNITE 673
SQ+QQ SWEWNLFR EIDL D S+R S+V +E E ++ +I E
Sbjct: 561 SQIQQGSWEWNLFRNEIDLSKID--------GDFSNRKVSIVYAVEHELASLNYSTSIFE 612
Query: 674 NENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIYRNARKSERF 733
N +D +++LDWD+L +IE SEE E E+E+ EER + WDDIYRNARKSE+
Sbjct: 613 NGTEVPLRDELTQLDWDILREIEISEENEMFEVEEAEERREKGVGVWDDIYRNARKSEKL 672
Query: 734 KFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGLALSSAARRLRSDDVDAV 793
KFE NERDEGELERTGQPVCIYEIY+G+G WPFLHHGSLYRGL+LS A+R SDDVDAV
Sbjct: 673 KFEVNERDEGELERTGQPVCIYEIYNGAGVWPFLHHGSLYRGLSLSRRAQRQSSDDVDAV 732
Query: 794 SRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKVLE 853
RL LLN T+YRDILCE+GGMF+IAN+VDNIH+RPWIGFQSWRAAGRKV+LS AEKVLE
Sbjct: 733 GRLPLLNDTYYRDILCEMGGMFAIANRVDNIHRRPWIGFQSWRAAGRKVALSAKAEKVLE 792
Query: 854 ETVQET-EGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMYGL 912
ET+QE GDV+YFW DMD N+N +FW MCDILNGG+CR F++ FRQMY L
Sbjct: 793 ETMQENFRGDVIYFWGRFDMDQSVIGNHN-ANSFWYMCDILNGGNCRIVFQEGFRQMYAL 851
Query: 913 PSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANSSKVNSCLLS 972
P H EALPPMPED G WSALH WVM TPSFLEFIMFSRMFVDS+DAL+ +S+K + CLL
Sbjct: 852 PPHAEALPPMPED-GYWSALHSWVMPTPSFLEFIMFSRMFVDSIDALHRDSTKYSLCLLG 910
Query: 973 SSELEKKHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGFMWMKYFNFT 1032
SSE+EKKHCYCRVLELL+NVWAYHS RKMVY++P +GS++EQHPIE+R+GFMW KYFN +
Sbjct: 911 SSEIEKKHCYCRVLELLINVWAYHSARKMVYINPNTGSMEEQHPIEQRKGFMWAKYFNIS 970
Query: 1033 LLKSMDEDLAEAADDGDYPREKWLWPWTGEVHWKGIYEREREERYRQKMDKKRKMKEKMF 1092
LLKSMDEDLAEAADDGD+PRE WLWP TGEVHW+GIYEREREERYR KMDKKRK KEK+F
Sbjct: 971 LLKSMDEDLAEAADDGDHPREMWLWPMTGEVHWQGIYEREREERYRLKMDKKRKTKEKLF 1030
Query: 1093 DRLTKGYRQKTLG 1105
+R+ GY+QK+LG
Sbjct: 1031 ERMKYGYKQKSLG 1043
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356574667|ref|XP_003555467.1| PREDICTED: uncharacterized protein LOC100790929 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1298 bits (3359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 662/1035 (63%), Positives = 800/1035 (77%), Gaps = 28/1035 (2%)
Query: 85 SIRDRFRFKRNPNHTQDKTQTKPSLHRYLLRHRHVNSTPSAANAATSGPRFNRKGFSS-L 143
+IR F FKRNP H + + L R +S + + + RKG L
Sbjct: 24 AIRGGFPFKRNPGHHRHRASFDRQLPRSNNSSSSSSSNNNNISIRSH--LHKRKGLLLWL 81
Query: 144 FPF-RGAYLLYFMIFLAVFAFAMASMVLQNSIASVF--GAERGRPIREELRFGSRLKFVP 200
FPF + Y I + VF FA+ASMVLQ+SI SVF A+ R I +RFGS L+FVP
Sbjct: 82 FPFPKSKSGFYAFIIVVVFLFALASMVLQSSITSVFRQSADSARYISGGIRFGSALRFVP 141
Query: 201 DQVG----FGNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFK 256
++ G+GLD +RS PR GVR PRI LILG+M D +SL+L+TV+ NLQKLGYVFK
Sbjct: 142 GRISQRFLSGDGLDPVRSQPRIGVRAPRIALILGHMTIDPQSLMLVTVIWNLQKLGYVFK 201
Query: 257 IYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHS 316
I+AV G + S+WE I G+I L E LIDWSIF+GII DSLEAK AISS+MQEPF S
Sbjct: 202 IFAVGHGKARSIWENIGGRICPLSTEHQGLIDWSIFEGIIVDSLEAKVAISSVMQEPFCS 261
Query: 317 IPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNF 376
+PL+WIIQEDSL++RLPVY + G+++++S+W+S FSR +V+VFPD+T PMLYS LD GNF
Sbjct: 262 VPLIWIIQEDSLSSRLPVYEQMGWEHIVSHWRSAFSRASVVVFPDFTYPMLYSELDTGNF 321
Query: 377 FVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHD 436
FVIPGSP DVWA E+Y K+H K QLR+ +GF K++++V+VVGSS F+++LSWDYAVAMH
Sbjct: 322 FVIPGSPVDVWAAESYHKTHAKEQLRELSGFGKNDMLVLVVGSSVFFDDLSWDYAVAMHS 381
Query: 437 VGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNG 496
VGPLL +YARRN SFKFVFLCGNSTDGY+DALQ VASR+GL + S+RHYG NGDVN
Sbjct: 382 VGPLLTRYARRNDATDSFKFVFLCGNSTDGYDDALQGVASRMGLRQGSIRHYGLNGDVNS 441
Query: 497 VLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPE 556
VLLMADI+LYGS+Q QGFP L++RAMTF IPV+ PDF ++K+Y+ +G IFF K NPE
Sbjct: 442 VLLMADIILYGSAQEVQGFPPLLIRAMTFEIPVVVPDFSVLKKYIVDGVHGIFFSKHNPE 501
Query: 557 GLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPG 616
L AFSL +SNG+LSKFA+ +AS+GR AKN+LALDC+T YAR+LENVLNFPSDALLPG
Sbjct: 502 ALMNAFSLLLSNGRLSKFAQAIASSGRQLAKNVLALDCITGYARLLENVLNFPSDALLPG 561
Query: 617 PISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEE-----FTKNI 671
+SQ+QQ SWEWNLF+ EIDL D S+R S+V +E E ++ +I
Sbjct: 562 AVSQIQQGSWEWNLFQNEIDLSKID-----------SNRKVSIVYAVEHELASLNYSTSI 610
Query: 672 TENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIYRNARKSE 731
EN QD +++LD D L +IE SEE E E+E+ EERM+ + WDDIYRNARKSE
Sbjct: 611 VENGTEVPLQDELTQLDLDTLREIEISEENEMFEVEEAEERMEKGVSVWDDIYRNARKSE 670
Query: 732 RFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGLALSSAARRLRSDDVD 791
+ KFE NERDEGELERTGQ VCIYEIY+G+G WPFLHHGSLYRGL+LS A+R SDDVD
Sbjct: 671 KLKFEVNERDEGELERTGQSVCIYEIYNGAGVWPFLHHGSLYRGLSLSRRAQRQTSDDVD 730
Query: 792 AVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKV 851
AV RL LLN T+YRDILCE+GGMF+IAN+VD+IH+RPWIGFQSWRAAGRKV+LS AE V
Sbjct: 731 AVGRLPLLNDTYYRDILCEMGGMFAIANRVDSIHRRPWIGFQSWRAAGRKVALSAKAENV 790
Query: 852 LEETVQET-EGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMY 910
LEET+QE GDV+YFW LDMD RN+N ++FW MCDILNGG+CR F+D FRQMY
Sbjct: 791 LEETMQENFRGDVIYFWGRLDMDQSAIRNHN-AISFWYMCDILNGGNCRIVFQDGFRQMY 849
Query: 911 GLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANSSKVNSCL 970
LP H EALPPMPEDGG WSALH WVM T SFLEFIMFSRMFVDS+DA + +S+K + CL
Sbjct: 850 ALPPHAEALPPMPEDGGYWSALHSWVMPTSSFLEFIMFSRMFVDSIDAKHRDSTKYSLCL 909
Query: 971 LSSSELEKKHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGFMWMKYFN 1030
L SSE+EKKHCYCR+LELL+NVWAYHS RKMVY++P +GS++EQHPIE+R+GFMW KYFN
Sbjct: 910 LGSSEIEKKHCYCRMLELLINVWAYHSARKMVYINPNTGSMEEQHPIEQRKGFMWSKYFN 969
Query: 1031 FTLLKSMDEDLAEAADDGDYPREKWLWPWTGEVHWKGIYEREREERYRQKMDKKRKMKEK 1090
F+LLKSMDEDLAEAADDGD+PRE WLWP TGEVHW+GIYEREREERYR KMDKKRK KEK
Sbjct: 970 FSLLKSMDEDLAEAADDGDHPREMWLWPMTGEVHWQGIYEREREERYRLKMDKKRKTKEK 1029
Query: 1091 MFDRLTKGYRQKTLG 1105
+F+R+ GY+QK+LG
Sbjct: 1030 LFERMKYGYKQKSLG 1044
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18414574|ref|NP_568137.1| UDP-glycosyltransferase family protein [Arabidopsis thaliana] gi|15450503|gb|AAK96544.1| AT5g04480/T32M21_80 [Arabidopsis thaliana] gi|24111433|gb|AAN46867.1| At5g04480/T32M21_80 [Arabidopsis thaliana] gi|332003367|gb|AED90750.1| UDP-glycosyltransferase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1285 bits (3324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/1063 (61%), Positives = 804/1063 (75%), Gaps = 42/1063 (3%)
Query: 63 DDNAAAA------ATTTSGNNDQQQHPHSIRDRFRFKRNPNHTQDKTQT---KPSLHRYL 113
DDN A A +GN D H SIRDR R KRN + +D++ + +PSL
Sbjct: 11 DDNGGAGRDGNHNANNVAGNGDTSFH--SIRDRLRLKRNSSDRRDRSHSGLDRPSLR--- 65
Query: 114 LRHRHVNSTPSAANAATSGPRFNRKGFSSLFPFRGAYLLYFMIFLAVFAFAMASMVLQNS 173
R H+ G NRKG SL RG LLYF++ V AF M+S++LQNS
Sbjct: 66 TRPHHI------------GRSLNRKGLLSLLKPRGTCLLYFLVAFTVCAFVMSSLLLQNS 113
Query: 174 IASVFGAERGRPIREELRFGSRLKFVPDQVGF----GNGLDGLRSTPRFGVRPPRIGLIL 229
I + G +G +R ++ GS LK+VP + G GLD LRS R GVRPPR+ L+L
Sbjct: 114 I-TWQGNVKGGQVRSQIGLGSTLKYVPGGIARTLIEGKGLDPLRSAVRIGVRPPRLALVL 172
Query: 230 GNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDW 289
GNM KD R+L+L+TV+KNLQKLGYVFK++AV +G + SLWEQ+AG + +L EQ DW
Sbjct: 173 GNMKKDPRTLMLVTVMKNLQKLGYVFKVFAVENGEARSLWEQLAGHVKVLVSEQLGHADW 232
Query: 290 SIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKS 349
+IF+G+IADSLEAKEAISSLMQEPF S+PL+WI+ ED LANRLPVY G +L+S+W+S
Sbjct: 233 TIFEGVIADSLEAKEAISSLMQEPFRSVPLIWIVHEDILANRLPVYQRMGQNSLISHWRS 292
Query: 350 VFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLK 409
F+R +V+VFP +TLPML+SVLD GNF VIP S DVWA E+YS++H K LR+ N F +
Sbjct: 293 AFARADVVVFPQFTLPMLHSVLDDGNFVVIPESVVDVWAAESYSETHTKQNLREINEFGE 352
Query: 410 DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYND 469
D+++++V+GSSFFY+E SWD AVAMH +GPLL +Y RR GSFKFVFL GNST G +D
Sbjct: 353 DDVIILVLGSSFFYDEFSWDNAVAMHMLGPLLTRYGRRKDTSGSFKFVFLYGNSTKGQSD 412
Query: 470 ALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPV 529
A+QEVASRLGL E +VRH+G N DVN VL MADI++Y SSQ EQ FP LIVRAM+FGIP+
Sbjct: 413 AVQEVASRLGLTEGTVRHFGLNEDVNRVLRMADILVYASSQEEQNFPPLIVRAMSFGIPI 472
Query: 530 ITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNM 589
ITPDFPI+K+Y+A+ IFF++++P+ L +AFS IS+G+LSKFA+T+AS+GRL KN+
Sbjct: 473 ITPDFPIMKKYMADEVHGIFFRRNDPDALLKAFSPLISDGRLSKFAQTIASSGRLLTKNL 532
Query: 590 LALDCVTRYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWG 649
+A +C+T YAR+LEN+L+FPSD LPG ISQLQ +WEWN FR E++ IL+
Sbjct: 533 MATECITGYARLLENMLHFPSDTFLPGSISQLQVAAWEWNFFRSELEQPKSFILD----S 588
Query: 650 TSTSSRNSSVVDLLEEEF-----TKNITENENRSADQDTISELDWDVLHDIESSEEYERL 704
S +V +EE+F + N +N + S+LDWDVL +IE +EEYE++
Sbjct: 589 AYAFIGKSGIVFQVEEKFMGVIESTNPVDNNTLFVSDELPSKLDWDVLEEIEGAEEYEKV 648
Query: 705 EMEQLEERMDGTFASWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAW 764
E E+LE+RM+ W++IYRNARKSE+ KFE NERDEGELERTG+P+CIYEIY+G+GAW
Sbjct: 649 ESEELEDRMERDVEDWEEIYRNARKSEKLKFEVNERDEGELERTGEPLCIYEIYNGAGAW 708
Query: 765 PFLHHGSLYRGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNI 824
PFLHHGSLYRGL+LSS RRL SDDVDA RL LLN T+YRDILCEIGGMFS+ANKVD+I
Sbjct: 709 PFLHHGSLYRGLSLSSKDRRLSSDDVDAADRLPLLNDTYYRDILCEIGGMFSVANKVDSI 768
Query: 825 HKRPWIGFQSWRAAGRKVSLSISAEKVLEETV-QETEGDVMYFWAHLDMDGGFTRNNNDV 883
H RPWIGFQSWRAAGRKVSLS AE+ LE + QET+G+++YFW LD+DG + N
Sbjct: 769 HMRPWIGFQSWRAAGRKVSLSSKAEESLENIIKQETKGEIIYFWTRLDIDGDAYGSKN-A 827
Query: 884 LTFWSMCDILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFL 943
LTFWSMCDILN G+CRT FEDAFR MYGLP H+EALPPMPEDG WS+LH WVM TPSFL
Sbjct: 828 LTFWSMCDILNQGNCRTTFEDAFRHMYGLPEHIEALPPMPEDGHHWSSLHNWVMPTPSFL 887
Query: 944 EFIMFSRMFVDSLDALNANSSKVNSCLLSSSELEKKHCYCRVLELLVNVWAYHSGRKMVY 1003
EF+MFSRMF +SLDAL+ N + SC L+SS LE+KHCYCRVLELLVNVWAYHSGRKMVY
Sbjct: 888 EFVMFSRMFSESLDALHNNLNDSKSCSLASSLLERKHCYCRVLELLVNVWAYHSGRKMVY 947
Query: 1004 LDPLSGSLQEQHPIERRRGFMWMKYFNFTLLKSMDEDLAEAADDGDYPREKWLWPWTGEV 1063
++P GSL+EQHP+++R+G MW KYFNFTLLKSMDEDLAEAADD D+PRE+WLWP TGEV
Sbjct: 948 INPRDGSLEEQHPLQQRKGLMWAKYFNFTLLKSMDEDLAEAADDKDHPRERWLWPLTGEV 1007
Query: 1064 HWKGIYEREREERYRQKMDKKRKMKEKMFDRLTKGYRQKTLGG 1106
HWKG+YEREREERYR KMDKKRK KEK++DR+ GY+QK+LGG
Sbjct: 1008 HWKGVYEREREERYRLKMDKKRKTKEKLYDRIKNGYKQKSLGG 1050
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224113167|ref|XP_002316413.1| predicted protein [Populus trichocarpa] gi|222865453|gb|EEF02584.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1279 bits (3310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 664/1102 (60%), Positives = 798/1102 (72%), Gaps = 105/1102 (9%)
Query: 68 AAATTTSGNNDQQQHPHSIRDRFRFKRNPNHTQDKTQTKPSLHRYLLRHRHVNSTPSAAN 127
+ AT T Q+ HSI DRF FKRNPN + + LR H + S
Sbjct: 14 SPATNTGSEGVSDQNFHSISDRFLFKRNPNPSTNSPHKSSKSPPDRLRRWHHYTNKSN-- 71
Query: 128 AATSGPRFNRKG-FSSLFPFRGAYLLYFMIFLAVFAFAMASMVLQNSIASVFGAERG--- 183
NRKG + S PFRG L YF+IFLAVFAF +AS++LQ+SI + +G
Sbjct: 72 --------NRKGGWFSCIPFRGICLFYFVIFLAVFAFVLASILLQSSITGMVVFSKGWID 123
Query: 184 --RPIREELRFGSRLKFVPDQ----VGFGNGLDGLRSTP-RFGVRPPRIGLI-------- 228
R IRE L+ G+ LKFVP + G+GLD R R G+RPPR+ +I
Sbjct: 124 HRRSIREGLKSGTTLKFVPGLRSRLLLEGHGLDHARVLANRVGLRPPRLAVIVKGLGVSL 183
Query: 229 ---------------------------------------LGNMAKDSRSLLLITVVKNLQ 249
LGNM KD +SL+L++V+KNL+
Sbjct: 184 NGHNGNWEIVCWLHPMAMHGPPSMTNMIKLKYGGGGRKILGNMKKDPQSLMLLSVMKNLR 243
Query: 250 KLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSL 309
KLGY KIYA+ +G + ++WE I GQIS+L +QY LIDWSIF+G++ DSLEAKE +SSL
Sbjct: 244 KLGYALKIYALGNGETRTMWEDIGGQISVLRPKQYDLIDWSIFEGVMVDSLEAKEVVSSL 303
Query: 310 MQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYS 369
QEPF SIPLVWIIQED+LANRLP+Y + Q+L+S+W+S F+R NV+VFPD+ LPMLYS
Sbjct: 304 SQEPFQSIPLVWIIQEDTLANRLPLYQDMNLQHLVSHWRSTFNRANVVVFPDFALPMLYS 363
Query: 370 VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD 429
VLD GNFFVIPGSP DVW E+YSK+H K+QLR ++GF +D++VV+VVGSSFFY+ELSWD
Sbjct: 364 VLDTGNFFVIPGSPVDVWDAESYSKTHAKHQLRVDHGFSEDDLVVLVVGSSFFYDELSWD 423
Query: 430 YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 489
Y VA+H +GP+L +YAR EGSFKFVFLCGNSTD +DA QE+ SR+GL SVRHYG
Sbjct: 424 YTVALHTLGPVLAEYARSKDAEGSFKFVFLCGNSTD--DDAFQEIVSRVGLHPSSVRHYG 481
Query: 490 FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIF 549
NGD N VLL ADIVLYGSSQ EQGFP +++RAMTFGIPVI PD P +K+YV++ A IF
Sbjct: 482 LNGDANSVLLAADIVLYGSSQDEQGFPPVLIRAMTFGIPVIAPDIPTMKKYVSDEAHGIF 541
Query: 550 FQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFP 609
F K NPE L+RAFSL ISNGKLSKFA TVA +GRL AKNMLA +C+T YAR+LEN+L+FP
Sbjct: 542 FSKYNPEALTRAFSLLISNGKLSKFAETVAFSGRLLAKNMLASECITGYARLLENMLSFP 601
Query: 610 SDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEFTK 669
SD LLPGP+S+L+Q WEWNLF KE++ T D+ M E + SSR +S+V LE+E++
Sbjct: 602 SDTLLPGPVSKLEQREWEWNLFNKELEQETDDLSGMYE--SLFSSRETSIVYSLEKEWSN 659
Query: 670 -----NITENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIY 724
I+EN DT +E DWDVL +IES EE+ER+ E+LEERMD T WDDIY
Sbjct: 660 LVNSTIISENGTEILVPDTPTESDWDVLMEIESFEEHERVVKEELEERMDKTRGLWDDIY 719
Query: 725 RNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGLALSSAARR 784
R+ARKSE+ KFE+NERDEGELERTGQP S+ ARR
Sbjct: 720 RSARKSEKLKFESNERDEGELERTGQP---------------------------STKARR 752
Query: 785 LRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSL 844
RSDDVDAV+RL LLN ++Y++ILCEIGGMFSIA +VD IHKRPWIGFQSW AAGRKVSL
Sbjct: 753 SRSDDVDAVARLPLLNESYYQNILCEIGGMFSIAIRVDAIHKRPWIGFQSWHAAGRKVSL 812
Query: 845 SISAEKVLEETVQETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFED 904
S AEKVLEE QE DVMYFWA L MDGG T +N + LTFWSMCD+LNGG CRTAFED
Sbjct: 813 SFKAEKVLEEKTQEENKDVMYFWARLGMDGGVTGSNEE-LTFWSMCDVLNGGRCRTAFED 871
Query: 905 AFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANSS 964
AFRQMY LPS++EALPPMPEDGG WSALH WVM TPSFLEFIMFSRMFVDSLDAL +NSS
Sbjct: 872 AFRQMYDLPSYLEALPPMPEDGGHWSALHSWVMPTPSFLEFIMFSRMFVDSLDALQSNSS 931
Query: 965 KVNSCLLSSSELEKKHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGFM 1024
+VN CLLSS+ELE+KHCYCR++E+LVNVWAYHS R+MVY+DP +GS++EQHPI++R+
Sbjct: 932 QVNKCLLSSTELEEKHCYCRIMEVLVNVWAYHSARRMVYIDPHTGSVEEQHPIKQRKEIA 991
Query: 1025 WMKYFNFTLLKSMDEDLAEAADDGDYPREKWLWPWTGEVHWKGIYEREREERYRQKMDKK 1084
W KYFN T+LKSMDEDLAEAADDGD+PRE+WLWP TGEVHW+GIYEREREERYR KMDKK
Sbjct: 992 WKKYFNLTVLKSMDEDLAEAADDGDHPRERWLWPLTGEVHWQGIYEREREERYRIKMDKK 1051
Query: 1085 RKMKEKMFDRLTKGYRQKTLGG 1106
RK +EK+ +RL GY+QK LGG
Sbjct: 1052 RKTREKLVERLKAGYKQKPLGG 1073
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297810537|ref|XP_002873152.1| hypothetical protein ARALYDRAFT_487229 [Arabidopsis lyrata subsp. lyrata] gi|297318989|gb|EFH49411.1| hypothetical protein ARALYDRAFT_487229 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1274 bits (3297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/1036 (61%), Positives = 795/1036 (76%), Gaps = 34/1036 (3%)
Query: 84 HSIRDRFRFKRNPNHTQDKTQTKPSLHRYLLRHR--HVNSTPSAANAATSGPRFNRKGFS 141
HSIRDR R KRN + +D++ + L R LR+R H+ + NRKG
Sbjct: 37 HSIRDRLRLKRNSSDRRDRSHS--GLDRPSLRNRPHHIARS------------LNRKGLI 82
Query: 142 SLFPFRGAYLLYFMIFLAVFAFAMASMVLQNSIASVFGAERGRPIREELRFGSRLKFVPD 201
SL RG LLYF++ V AF M+S++LQNSI +RG+ +R ++ GS LK+VP
Sbjct: 83 SLLKPRGTCLLYFLVAFTVCAFVMSSLLLQNSITWQGNVKRGQ-VRSQIGLGSTLKYVPG 141
Query: 202 QVGF----GNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKI 257
+ G GLD LRST R GVRPPR+ L+LGNM KD R+L+L+TV+KNLQKLGYVFK+
Sbjct: 142 GIARTLIEGEGLDPLRSTVRIGVRPPRLALVLGNMKKDPRTLMLVTVMKNLQKLGYVFKV 201
Query: 258 YAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSI 317
+AV +G + SLWE +AG + +L EQ DW+IF+G+IADSLEAKEAISSLMQEPF S+
Sbjct: 202 FAVENGEARSLWEHLAGHVKVLVSEQLGHADWTIFEGVIADSLEAKEAISSLMQEPFRSV 261
Query: 318 PLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFF 377
PL+WI+ ED LAN+LPVY G +L+S+W+S F+R +V+VFP +TLPML+S+LD GNF
Sbjct: 262 PLIWIVHEDILANQLPVYQRMGQNSLISHWRSAFARADVVVFPQFTLPMLHSILDDGNFV 321
Query: 378 VIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDV 437
VIP S D+WA E+YS++H K +LR+ N F +++++++V+GSSFFYNE SWD AVAMH +
Sbjct: 322 VIPESVVDIWAAESYSETHTKQKLREINEFGEEDVIILVLGSSFFYNEFSWDNAVAMHML 381
Query: 438 GPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGV 497
GPLL +Y RR SFKFVFL GNST G +DA+QEVA+RLGL E +VRH+G N DVN V
Sbjct: 382 GPLLTRYGRRKDTSNSFKFVFLYGNSTKGQSDAVQEVAARLGLTEGTVRHFGLNEDVNKV 441
Query: 498 LLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEG 557
L MADI++Y SSQ EQ FP LIVRAM+FGIP+ITPDFP++K+Y+A+ IFF++++P+
Sbjct: 442 LRMADILVYASSQEEQNFPPLIVRAMSFGIPIITPDFPVMKKYLADEVHGIFFRRNDPDA 501
Query: 558 LSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPGP 617
L +AFS IS+G+LS+FA+T+AS+GRL KN++A +C+T YAR+LEN+L+FPSD LPG
Sbjct: 502 LLKAFSPLISDGRLSEFAQTIASSGRLLTKNLMATECITGYARLLENILHFPSDTFLPGS 561
Query: 618 ISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEF-----TKNIT 672
ISQLQ SWEW+ FR E++ IL+ S S +V +EE++ + N
Sbjct: 562 ISQLQGASWEWSFFRSELEQPKSFILD----SAYASIGKSGIVFQVEEKYMGVIESTNPV 617
Query: 673 ENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIYRNARKSER 732
+N + S+LDWDVL +IE +EEYE +E E+LE+RM+ W++IYRNARKSE+
Sbjct: 618 DNSTLFVSDELPSKLDWDVLEEIEGAEEYENVESEELEDRMERDVEDWEEIYRNARKSEK 677
Query: 733 FKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGLALSSAARRLRSDDVDA 792
KFE NERDEGELERTGQPVCIYEIY G+GAWPFLHHGSLYRGL+LSS RRL SDDVDA
Sbjct: 678 LKFEVNERDEGELERTGQPVCIYEIYDGAGAWPFLHHGSLYRGLSLSSKDRRLSSDDVDA 737
Query: 793 VSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKVL 852
RL LLN T+YRDILCEIGGMFS+ANKVD+IH RPWIGFQSWRAAGRKVSLS AE+ L
Sbjct: 738 ADRLPLLNDTYYRDILCEIGGMFSVANKVDSIHMRPWIGFQSWRAAGRKVSLSSKAEESL 797
Query: 853 EETV-QETEGDVMYFWAHLDMDG-GFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMY 910
E + QET+G+++YFW LD+DG + R N LTFWSMCDILN G+CRT FEDAFR +Y
Sbjct: 798 ENIIKQETKGEIIYFWTRLDIDGDAYGRKN--ALTFWSMCDILNQGNCRTTFEDAFRHIY 855
Query: 911 GLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANSSKVNSCL 970
GLP H+EALPPMPEDG WS+LH WVM TPSFLEF+MFSRMF +SLDAL+ N + SC
Sbjct: 856 GLPEHIEALPPMPEDGHHWSSLHNWVMPTPSFLEFVMFSRMFSESLDALHNNLNDSKSCS 915
Query: 971 LSSSELEKKHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGFMWMKYFN 1030
L+SS LE+KHCYCRVLELLVNVWAYHSGRKMVY++P GSL+EQHP+ +R+G MW KYFN
Sbjct: 916 LASSLLERKHCYCRVLELLVNVWAYHSGRKMVYINPRDGSLEEQHPLLQRKGLMWAKYFN 975
Query: 1031 FTLLKSMDEDLAEAADDGDYPREKWLWPWTGEVHWKGIYEREREERYRQKMDKKRKMKEK 1090
FTLLKSMDEDLAEAADD D+PRE+WLWP TGEVHWKG+YEREREERYR KMDKKRK KEK
Sbjct: 976 FTLLKSMDEDLAEAADDKDHPRERWLWPLTGEVHWKGVYEREREERYRLKMDKKRKTKEK 1035
Query: 1091 MFDRLTKGYRQKTLGG 1106
++DR+ GY+QK+LGG
Sbjct: 1036 LYDRIKNGYKQKSLGG 1051
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448875|ref|XP_002270269.1| PREDICTED: uncharacterized protein LOC100254795 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1263 bits (3268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/1002 (64%), Positives = 772/1002 (77%), Gaps = 37/1002 (3%)
Query: 123 PSAANAATSGPRFNRKGFSSLFPFRGAYLLYFMIFLAVFAFAMASMVLQNSIASVFGAER 182
P A + R F +++ F + + ++F+ MV+Q I E+
Sbjct: 44 PQGIRVARAHRGARRGSFCTMWRFLSGSIAFSVLFIVFL------MVMQTKIRV---PEQ 94
Query: 183 GRPIREELRFGSRLKF----VPDQVGFGNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRS 238
G + ++ G LKF + + G NGLD LRS R GVR P + LILGNM K+ S
Sbjct: 95 GWSFLDGIKSGKSLKFGQGSLLRRFGQRNGLDHLRSEMRIGVRRPTLALILGNMKKNPPS 154
Query: 239 LLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIAD 298
L+L TV+KNLQ LGY+FKIYAV NS S+WEQ+ GQISIL E YS DW+ F+GII D
Sbjct: 155 LMLFTVIKNLQGLGYLFKIYAVHDDNSRSIWEQLGGQISILSPEIYSHNDWTTFEGIIVD 214
Query: 299 SLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358
SLEAKEAI SLMQEPF IPL+WIIQED+LA RLP Y + G+++L+SYW+S FSR +V+V
Sbjct: 215 SLEAKEAILSLMQEPFCFIPLIWIIQEDTLAKRLPFYEKLGWEHLVSYWRSAFSRADVVV 274
Query: 359 FPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVG 418
FPD++LPMLYSVLD GNFFVIP SP DVWA E+YSK+H KYQLR++ GF KD+++V+VVG
Sbjct: 275 FPDFSLPMLYSVLDTGNFFVIPASPVDVWAAESYSKTHSKYQLREDLGFNKDDMLVLVVG 334
Query: 419 SSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRL 478
SSFFY+ELSWDYAVAM+D+GPLL KYAR + F+FVFLCGNSTDGYND L+EVAS L
Sbjct: 335 SSFFYDELSWDYAVAMNDIGPLLSKYARSKNAGAMFRFVFLCGNSTDGYNDHLKEVASHL 394
Query: 479 GLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK 538
LL SVR YG N DVNG++LMAD+V+Y SSQVEQGFP L+ RAM+FGIPVI PD P I+
Sbjct: 395 KLLPGSVRQYGMNSDVNGLILMADVVIYASSQVEQGFPPLLTRAMSFGIPVIAPDLPDIR 454
Query: 539 EYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRY 598
+YV +G V+ F K+NP+ L RAFSL ISNGKLSKFA+ VA +GRL AKNMLA +CV Y
Sbjct: 455 KYVVDGVHVVIFPKNNPDALMRAFSLLISNGKLSKFAKAVALSGRLLAKNMLASECVNSY 514
Query: 599 ARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSS 658
A++LENVL+FPSD LLPG ISQ Q +WEWN FR T D+ ++ S S R SS
Sbjct: 515 AKLLENVLSFPSDVLLPGHISQSQHDAWEWNSFR------TADMPLIE--NGSASMRKSS 566
Query: 659 VVDLLEEEFTKNITEN--ENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGT 716
VVD+LEE + + N + D +++LDWDVL +IES EE ERLEME+LEERM+
Sbjct: 567 VVDVLEETLSNQLDSGNISNSETENDVLTQLDWDVLREIESIEEMERLEMEELEERMEKN 626
Query: 717 FASWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGL 776
WD+IYRNARK ER KFE NERDEGELERTGQP+CIYEIY+G+GAWPFLHHGS+YRGL
Sbjct: 627 PGIWDEIYRNARKVERVKFETNERDEGELERTGQPLCIYEIYNGAGAWPFLHHGSMYRGL 686
Query: 777 ALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWR 836
+L+++ARRLRSDDVDAV RL +LN T+YRDI C+IGGMFSIA +VD IHKRPWIGFQSW
Sbjct: 687 SLTTSARRLRSDDVDAVDRLPVLNDTYYRDIFCDIGGMFSIAFRVDKIHKRPWIGFQSWH 746
Query: 837 AAGRKVSLSISAEKVLEETVQ-ETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNG 895
A G KVSLS AEKVLEET+Q ET+GDV+YFWAHL++D G T+ N + TFWSMCDILNG
Sbjct: 747 AVGSKVSLSSRAEKVLEETIQEETKGDVLYFWAHLNVDDGPTQKNR-IPTFWSMCDILNG 805
Query: 896 GHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDS 955
G+CRTAFEDAFRQMY +PS++EALPPMPEDGG WSALH WVM TPSFLEFIMFSRMF DS
Sbjct: 806 GNCRTAFEDAFRQMYAMPSYIEALPPMPEDGGYWSALHSWVMPTPSFLEFIMFSRMFADS 865
Query: 956 LDALN------------ANSSKVNSCLLSSSELEKKHCYCRVLELLVNVWAYHSGRKMVY 1003
LDAL+ NSS+ CLL SS+LEKKHCYCRVLELLVNVWAYHS RKMVY
Sbjct: 866 LDALHMNSRQSMNLSQSMNSSQPTVCLLGSSKLEKKHCYCRVLELLVNVWAYHSARKMVY 925
Query: 1004 LDPLSGSLQEQHPIERRRGFMWMKYFNFTLLKSMDEDLAEAADDGDYPREKWLWPWTGEV 1063
++P SG L+EQHP+E+RRGFMW KYFN TLLKSMDEDLAEAADDGD+PRE+WLWP TGEV
Sbjct: 926 INPYSGQLEEQHPVEQRRGFMWAKYFNSTLLKSMDEDLAEAADDGDHPRERWLWPLTGEV 985
Query: 1064 HWKGIYEREREERYRQKMDKKRKMKEKMFDRLTKGYRQKTLG 1105
HW+GIYEREREERYR KMDKKRK KEK+ +R+ GY+QK +G
Sbjct: 986 HWQGIYEREREERYRSKMDKKRKAKEKLVERMKHGYKQKPIG 1027
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147820655|emb|CAN65363.1| hypothetical protein VITISV_036074 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1252 bits (3240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/1011 (64%), Positives = 772/1011 (76%), Gaps = 46/1011 (4%)
Query: 123 PSAANAATSGPRFNRKGFSSLFPFRGAYLLYFMIFLAVFAFAMASMVLQNSIASVFGAER 182
P A + R F +++ F + + ++F+ MV+Q I E+
Sbjct: 44 PQGIRVARAHRGARRGSFCTMWRFLSGSIAFSVLFIVFL------MVMQTKIRV---PEQ 94
Query: 183 GRPIREELRFGSRLKF----VPDQVGFGNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRS 238
G + ++ G LKF + + G NGLD LRS R GVR P + LILGNM K+ S
Sbjct: 95 GWSFLDGIKSGKSLKFGQGSLLRRFGQRNGLDHLRSEMRIGVRRPXLALILGNMKKNPPS 154
Query: 239 LLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIAD 298
L+L TV+KNLQ LGY+FKIYAV NS S+WEQ+ GQISIL E YS DW+ F+GII D
Sbjct: 155 LMLFTVIKNLQGLGYLFKIYAVXDDNSRSIWEQLGGQISILSPEIYSHNDWTTFEGIIVD 214
Query: 299 SLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358
SLEAKEAI SLMQEPF IPL+WIIQED+LA RLP Y + G+++L+SYW+S FSR +V+V
Sbjct: 215 SLEAKEAILSLMQEPFCFIPLIWIIQEDTLAKRLPFYEKLGWEHLVSYWRSAFSRADVVV 274
Query: 359 FPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVG 418
FPD++LPMLYSVLD GNFFVIP SP DVWA E+YSK+H KYQLR++ GF KD+++V+VVG
Sbjct: 275 FPDFSLPMLYSVLDTGNFFVIPASPVDVWAAESYSKTHSKYQLREDLGFNKDDMLVLVVG 334
Query: 419 SSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD---------GYND 469
SSFFY+ELSWDYAVAM+D+GPLL KYAR + +FVFLCGNSTD GYND
Sbjct: 335 SSFFYDELSWDYAVAMNDIGPLLSKYARSKNAGAMXRFVFLCGNSTDGYNDHLKVYGYND 394
Query: 470 ALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPV 529
L+EVAS L LL SVR YG N DVNG++LMAD+V+Y SSQVEQGFP L+ RAM+FGIPV
Sbjct: 395 HLKEVASHLKLLPGSVRQYGMNSDVNGLMLMADVVIYASSQVEQGFPPLLTRAMSFGIPV 454
Query: 530 ITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNM 589
I PD P I++YV +G V+ F K+NP+ L RAFSL ISNGKLSKFA+ VA +GRL AKNM
Sbjct: 455 IAPDLPDIRKYVVDGVHVVIFPKNNPDALMRAFSLLISNGKLSKFAKAVALSGRLLAKNM 514
Query: 590 LALDCVTRYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWG 649
LA +CV YA++LENVL+FPSD LLPG ISQ Q +WEWN FR T D+ ++
Sbjct: 515 LASECVNSYAKLLENVLSFPSDVLLPGHISQSQHDAWEWNSFR------TADMPLIE--N 566
Query: 650 TSTSSRNSSVVDLLEEEFTKNITEN--ENRSADQDTISELDWDVLHDIESSEEYERLEME 707
S S R SSVVD+LEE + + N + D +++LDWDVL +IES EE ERLEME
Sbjct: 567 GSASMRKSSVVDVLEETLSNQLDSGNISNSETENDVLTQLDWDVLREIESIEEMERLEME 626
Query: 708 QLEERMDGTFASWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFL 767
+LEERM+ WD+IYRNARK ER KFEANERDEGELERTGQP+CIYEIY+G+GAWPFL
Sbjct: 627 ELEERMEKNPGIWDEIYRNARKVERVKFEANERDEGELERTGQPLCIYEIYNGAGAWPFL 686
Query: 768 HHGSLYRGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKR 827
HHGS+YRGL+L+++ARRLRSDDVDAV RL +LN T+YRDI C+IGGMFSIA +VD IHKR
Sbjct: 687 HHGSMYRGLSLTTSARRLRSDDVDAVDRLPVLNDTYYRDIFCDIGGMFSIAFRVDKIHKR 746
Query: 828 PWIGFQSWRAAGRKVSLSISAEKVLEETVQ-ETEGDVMYFWAHLDMDGGFTRNNNDVLTF 886
PWIGFQSW A G KVSLS AEKVLEET+Q ET+GDV+YFWAHL++D G T+ N + TF
Sbjct: 747 PWIGFQSWHAVGSKVSLSSRAEKVLEETIQEETKGDVLYFWAHLNVDDGPTQKNR-IPTF 805
Query: 887 WSMCDILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFI 946
WSMCDILNGG+CRTAFEDAFRQMY +PS++EALPPMPEDGG WSALH WVM TPSFLEFI
Sbjct: 806 WSMCDILNGGNCRTAFEDAFRQMYAMPSYIEALPPMPEDGGYWSALHSWVMPTPSFLEFI 865
Query: 947 MFSRMFVDSLDALN------------ANSSKVNSCLLSSSELEKKHCYCRVLELLVNVWA 994
MFSRMF DSLDAL+ NSS+ CLL SS+LEKKHCYCRVLELLVNVWA
Sbjct: 866 MFSRMFADSLDALHMNSRQSMNLSQSMNSSQPTVCLLGSSKLEKKHCYCRVLELLVNVWA 925
Query: 995 YHSGRKMVYLDPLSGSLQEQHPIERRRGFMWMKYFNFTLLKSMDEDLAEAADDGDYPREK 1054
YHS RKMVY++P SG L+EQHP+E+RRGFMW KYFN TLLKSMDEDLAEAADDGD+PRE+
Sbjct: 926 YHSARKMVYINPYSGQLEEQHPVEQRRGFMWAKYFNSTLLKSMDEDLAEAADDGDHPRER 985
Query: 1055 WLWPWTGEVHWKGIYEREREERYRQKMDKKRKMKEKMFDRLTKGYRQKTLG 1105
WLWP TGEVHW+GIYEREREERYR KMDKKRK KEK+ +R+ GY+QK +G
Sbjct: 986 WLWPLTGEVHWQGIYEREREERYRSKMDKKRKAKEKLVERMKHGYKQKPIG 1036
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334187426|ref|NP_001190226.1| UDP-glycosyltransferase family protein [Arabidopsis thaliana] gi|332003368|gb|AED90751.1| UDP-glycosyltransferase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1247 bits (3226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/1063 (60%), Positives = 789/1063 (74%), Gaps = 57/1063 (5%)
Query: 63 DDNAAAA------ATTTSGNNDQQQHPHSIRDRFRFKRNPNHTQDKTQT---KPSLHRYL 113
DDN A A +GN D H SIRDR R KRN + +D++ + +PSL
Sbjct: 11 DDNGGAGRDGNHNANNVAGNGDTSFH--SIRDRLRLKRNSSDRRDRSHSGLDRPSLR--- 65
Query: 114 LRHRHVNSTPSAANAATSGPRFNRKGFSSLFPFRGAYLLYFMIFLAVFAFAMASMVLQNS 173
R H+ G NRKG SL RG LLYF++ V AF M+S++LQNS
Sbjct: 66 TRPHHI------------GRSLNRKGLLSLLKPRGTCLLYFLVAFTVCAFVMSSLLLQNS 113
Query: 174 IASVFGAERGRPIREELRFGSRLKFVPDQVGF----GNGLDGLRSTPRFGVRPPRIGLIL 229
I + G +G +R ++ GS LK+VP + G GLD LRS R GVRPPR+ L+L
Sbjct: 114 I-TWQGNVKGGQVRSQIGLGSTLKYVPGGIARTLIEGKGLDPLRSAVRIGVRPPRLALVL 172
Query: 230 GNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDW 289
GNM KD R+L+L+ +AV +G + SLWEQ+AG + +L EQ DW
Sbjct: 173 GNMKKDPRTLMLV---------------FAVENGEARSLWEQLAGHVKVLVSEQLGHADW 217
Query: 290 SIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKS 349
+IF+G+IADSLEAKEAISSLMQEPF S+PL+WI+ ED LANRLPVY G +L+S+W+S
Sbjct: 218 TIFEGVIADSLEAKEAISSLMQEPFRSVPLIWIVHEDILANRLPVYQRMGQNSLISHWRS 277
Query: 350 VFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLK 409
F+R +V+VFP +TLPML+SVLD GNF VIP S DVWA E+YS++H K LR+ N F +
Sbjct: 278 AFARADVVVFPQFTLPMLHSVLDDGNFVVIPESVVDVWAAESYSETHTKQNLREINEFGE 337
Query: 410 DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYND 469
D+++++V+GSSFFY+E SWD AVAMH +GPLL +Y RR GSFKFVFL GNST G +D
Sbjct: 338 DDVIILVLGSSFFYDEFSWDNAVAMHMLGPLLTRYGRRKDTSGSFKFVFLYGNSTKGQSD 397
Query: 470 ALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPV 529
A+QEVASRLGL E +VRH+G N DVN VL MADI++Y SSQ EQ FP LIVRAM+FGIP+
Sbjct: 398 AVQEVASRLGLTEGTVRHFGLNEDVNRVLRMADILVYASSQEEQNFPPLIVRAMSFGIPI 457
Query: 530 ITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNM 589
ITPDFPI+K+Y+A+ IFF++++P+ L +AFS IS+G+LSKFA+T+AS+GRL KN+
Sbjct: 458 ITPDFPIMKKYMADEVHGIFFRRNDPDALLKAFSPLISDGRLSKFAQTIASSGRLLTKNL 517
Query: 590 LALDCVTRYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWG 649
+A +C+T YAR+LEN+L+FPSD LPG ISQLQ +WEWN FR E++ IL+
Sbjct: 518 MATECITGYARLLENMLHFPSDTFLPGSISQLQVAAWEWNFFRSELEQPKSFILD----S 573
Query: 650 TSTSSRNSSVVDLLEEEF-----TKNITENENRSADQDTISELDWDVLHDIESSEEYERL 704
S +V +EE+F + N +N + S+LDWDVL +IE +EEYE++
Sbjct: 574 AYAFIGKSGIVFQVEEKFMGVIESTNPVDNNTLFVSDELPSKLDWDVLEEIEGAEEYEKV 633
Query: 705 EMEQLEERMDGTFASWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAW 764
E E+LE+RM+ W++IYRNARKSE+ KFE NERDEGELERTG+P+CIYEIY+G+GAW
Sbjct: 634 ESEELEDRMERDVEDWEEIYRNARKSEKLKFEVNERDEGELERTGEPLCIYEIYNGAGAW 693
Query: 765 PFLHHGSLYRGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNI 824
PFLHHGSLYRGL+LSS RRL SDDVDA RL LLN T+YRDILCEIGGMFS+ANKVD+I
Sbjct: 694 PFLHHGSLYRGLSLSSKDRRLSSDDVDAADRLPLLNDTYYRDILCEIGGMFSVANKVDSI 753
Query: 825 HKRPWIGFQSWRAAGRKVSLSISAEKVLEETV-QETEGDVMYFWAHLDMDGGFTRNNNDV 883
H RPWIGFQSWRAAGRKVSLS AE+ LE + QET+G+++YFW LD+DG + N
Sbjct: 754 HMRPWIGFQSWRAAGRKVSLSSKAEESLENIIKQETKGEIIYFWTRLDIDGDAYGSKN-A 812
Query: 884 LTFWSMCDILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFL 943
LTFWSMCDILN G+CRT FEDAFR MYGLP H+EALPPMPEDG WS+LH WVM TPSFL
Sbjct: 813 LTFWSMCDILNQGNCRTTFEDAFRHMYGLPEHIEALPPMPEDGHHWSSLHNWVMPTPSFL 872
Query: 944 EFIMFSRMFVDSLDALNANSSKVNSCLLSSSELEKKHCYCRVLELLVNVWAYHSGRKMVY 1003
EF+MFSRMF +SLDAL+ N + SC L+SS LE+KHCYCRVLELLVNVWAYHSGRKMVY
Sbjct: 873 EFVMFSRMFSESLDALHNNLNDSKSCSLASSLLERKHCYCRVLELLVNVWAYHSGRKMVY 932
Query: 1004 LDPLSGSLQEQHPIERRRGFMWMKYFNFTLLKSMDEDLAEAADDGDYPREKWLWPWTGEV 1063
++P GSL+EQHP+++R+G MW KYFNFTLLKSMDEDLAEAADD D+PRE+WLWP TGEV
Sbjct: 933 INPRDGSLEEQHPLQQRKGLMWAKYFNFTLLKSMDEDLAEAADDKDHPRERWLWPLTGEV 992
Query: 1064 HWKGIYEREREERYRQKMDKKRKMKEKMFDRLTKGYRQKTLGG 1106
HWKG+YEREREERYR KMDKKRK KEK++DR+ GY+QK+LGG
Sbjct: 993 HWKGVYEREREERYRLKMDKKRKTKEKLYDRIKNGYKQKSLGG 1035
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441828|ref|XP_004138684.1| PREDICTED: uncharacterized protein LOC101206364 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1243 bits (3217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/1056 (60%), Positives = 799/1056 (75%), Gaps = 43/1056 (4%)
Query: 63 DDNAAAAATTTSGNNDQQQHPHSIRDRFRFKRNPNHTQDKTQTKPSLHRYLLRHRHVNST 122
DDNA+A A T + HSIRDRF FKRN +H + + K SL
Sbjct: 10 DDNASANAVTGT---------HSIRDRFPFKRNSSHF--RLRVKDSLDH----------- 47
Query: 123 PSAANAATSGPRFNRKGFSSLFPFRGAYLLYFMIFLAVFAF--AMASMVLQNSIASVFGA 180
+A+ + + R NRKG S P RG L YF++ AVF F + S+ S G+
Sbjct: 48 -AASRSRSHQTRINRKGLLSWIPARGQTLFYFLVVFAVFGFFTGSMLLQSSISLLSSHGS 106
Query: 181 ERGRPIREELRFGSRLKFVPDQVGF----GNGLDGLRSTPRFGVRPPRIGLILGNMAKDS 236
+R R + E ++FGS LKFVP ++ G+GL+ +R R GVR PR+ LILG+M D
Sbjct: 107 QRERWLMERIKFGSSLKFVPGRISKRLVEGDGLEEVRKKDRVGVRAPRLALILGSMENDP 166
Query: 237 RSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGII 296
+SL+LITV+KN+QKLGYVF+I+AV GN S+WEQI GQ SIL Y +DWSI+DGII
Sbjct: 167 QSLMLITVMKNIQKLGYVFEIFAVERGNKQSMWEQI-GQPSILSPGHYGRVDWSIYDGII 225
Query: 297 ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNV 356
ADSLE + AI+SLMQEPF S+PL+WI++ED+LA+RLP+Y +RG+++L+S+WK F R NV
Sbjct: 226 ADSLETEGAIASLMQEPFCSLPLIWIVREDTLASRLPMYEQRGWKHLISHWKRSFRRANV 285
Query: 357 IVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVV 416
+VFPD+ LPMLYS+LD GNF VIPGSPADV+A E Y H K QLR++NGF +D+I+V+V
Sbjct: 286 VVFPDFALPMLYSILDNGNFHVIPGSPADVYAAEDYMNVHSKSQLREKNGFNEDDILVLV 345
Query: 417 VGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVAS 476
VGS FF NELSWDYAVAMH +GPLL YARR VEGSFKFVFLC NSTDG +DAL+E+AS
Sbjct: 346 VGSLFFPNELSWDYAVAMHSIGPLLSIYARRREVEGSFKFVFLCCNSTDGSHDALKEIAS 405
Query: 477 RLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI 536
RLGL + S+ HYG NGDVN VL+MADIVLYGSSQ Q FP L++RAM+FGIP++ PD P
Sbjct: 406 RLGLPDGSITHYGLNGDVNNVLMMADIVLYGSSQEIQSFPPLLIRAMSFGIPIMVPDLPA 465
Query: 537 IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVT 596
+K Y+ +G + F K NP+ L +FS IS+GKLS+FA+++AS+GRL AKN+LA +CVT
Sbjct: 466 LKNYIVDGVHGVIFPKHNPDALLSSFSQMISDGKLSRFAQSIASSGRLLAKNILASECVT 525
Query: 597 RYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRN 656
YA++LENVLNFPSD LPGP+SQLQ +WEWNLFRKE+ + T D +E +T S+
Sbjct: 526 GYAQLLENVLNFPSDVKLPGPVSQLQLGAWEWNLFRKEM-VKTIDENADNEERIATISK- 583
Query: 657 SSVVDLLEEEFTKNI-----TENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEE 711
+SV+ LE + T ++ +ENEN + +QD + DWD+L IES+EEYE +EME+ +E
Sbjct: 584 ASVIFALEAQLTNSVNLTILSENENGTLEQDIPTPQDWDILEKIESAEEYETVEMEEFQE 643
Query: 712 RMDGTFASWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGS 771
RM+ +WD+IYRNARKSE+ KFE+NERDEGELERTGQ V IYEIYSG+GAWPF+HHGS
Sbjct: 644 RMERDLGAWDEIYRNARKSEKLKFESNERDEGELERTGQTVSIYEIYSGAGAWPFMHHGS 703
Query: 772 LYRGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIG 831
LYRGL+LS+ A RL+SDDV+AV RL LL+ ++Y D LCEIGGMF+IANK+DNIHKRPWIG
Sbjct: 704 LYRGLSLSTRALRLKSDDVNAVGRLPLLDDSYYLDALCEIGGMFAIANKIDNIHKRPWIG 763
Query: 832 FQSWRAAGRKVSLSISAEKVLEETVQET-EGDVMYFWAHLDMDGGFTRNNNDVLTFWSMC 890
FQSW+A+GRKVSL AE VLE+T+Q+ +GDV+YFWAHL ++ G TFWS+C
Sbjct: 764 FQSWQASGRKVSLGKKAENVLEDTIQDNPKGDVIYFWAHLQVNRGTIPP-----TFWSVC 818
Query: 891 DILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSR 950
DILNGG CRT F FR+M+GL S++ ALPPMPEDGG WSALH WVM TPSFLEFIMFSR
Sbjct: 819 DILNGGLCRTTFRSTFREMFGLSSNMGALPPMPEDGGHWSALHSWVMPTPSFLEFIMFSR 878
Query: 951 MFVDSLDALNANSSKVNSCLLSSSELEKKHCYCRVLELLVNVWAYHSGRKMVYLDPLSGS 1010
MF LDALN N S+ N CLL+SSE+EKKHCYCR+LE+LVNVWAYHSGR+MVY++P SG
Sbjct: 879 MFTHYLDALNRNQSQPNGCLLASSEIEKKHCYCRILEMLVNVWAYHSGRRMVYINPHSGF 938
Query: 1011 LQEQHPIERRRGFMWMKYFNFTLLKSMDEDLAEAADDGDYPREKWLWPWTGEVHWKGIYE 1070
L+EQHP+E+R+ FMW KYFNFTLLKSMDEDLAEAADD + LWP TGEVHW+GIYE
Sbjct: 939 LEEQHPVEQRKEFMWAKYFNFTLLKSMDEDLAEAADDEGGSGKIGLWPLTGEVHWQGIYE 998
Query: 1071 REREERYRQKMDKKRKMKEKMFDRLTKGYRQKTLGG 1106
REREERYR KMDKKR K K+ +R+ GY+QK+LGG
Sbjct: 999 REREERYRVKMDKKRTTKVKLMERMKFGYKQKSLGG 1034
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449522726|ref|XP_004168377.1| PREDICTED: uncharacterized protein LOC101229264 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1237 bits (3200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/1059 (60%), Positives = 799/1059 (75%), Gaps = 46/1059 (4%)
Query: 63 DDNAAAAATTTSGNNDQQQHPHSIRDRFRFKRNPNHTQDKTQTKPSLHRYLLRHRHVNST 122
DDNA+A A T + HSIRDRF FKRN +H + + K SL
Sbjct: 10 DDNASANAVTGT---------HSIRDRFPFKRNSSHF--RLRVKDSLDH----------- 47
Query: 123 PSAANAATSGPRFNRKGFSSLFPFRGAYLLYFMIFLAVFAF--AMASMVLQNSIASVFGA 180
+A+ + + R NRKG S P RG L YF++ AVF F + S+ S G+
Sbjct: 48 -AASRSRSHQTRINRKGLLSWIPARGQTLFYFLVVFAVFGFFTGSMLLQSSISLLSSHGS 106
Query: 181 ERGRPIREELRFGSRLKFVPDQVGF----GNGLDGLRSTPRFGVRPPRIGLILGNMAKDS 236
+R R + E ++FGS LKFVP ++ G+GL+ +R R GVR PR+ LILG+M D
Sbjct: 107 QRERWLMERIKFGSSLKFVPGRISKRLVEGDGLEEVRKKDRVGVRAPRLALILGSMENDP 166
Query: 237 RSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGII 296
+SL+LITV+KN+QKLGYVF+I+AV GN S+WEQI GQ SIL Y +DWSI+DGII
Sbjct: 167 QSLMLITVMKNIQKLGYVFEIFAVERGNKQSMWEQI-GQPSILSPGHYGRVDWSIYDGII 225
Query: 297 ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNV 356
ADSLE + AI+SLMQEPF S+PL+WI++ED+LA+RLP+Y +RG+++L+S+WK F R NV
Sbjct: 226 ADSLETEGAIASLMQEPFCSLPLIWIVREDTLASRLPMYEQRGWKHLISHWKRSFRRANV 285
Query: 357 IVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVV 416
+VFPD+ LPMLYS+LD GNF VIPGSPADV+A E Y H K QLR++NGF +D+I+V+V
Sbjct: 286 VVFPDFALPMLYSILDNGNFHVIPGSPADVYAAEDYMNVHSKSQLREKNGFNEDDILVLV 345
Query: 417 VGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVAS 476
VGS FF NELSWDYAVAMH +GPLL YARR VEGSFKFVFLC NSTDG +DAL+E+AS
Sbjct: 346 VGSLFFPNELSWDYAVAMHSIGPLLSIYARRREVEGSFKFVFLCCNSTDGSHDALKEIAS 405
Query: 477 RLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI 536
RLGL + S+ HYG NGDVN VL+MADIVLYGSSQ Q FP L++RAM+FGIP++ PD P
Sbjct: 406 RLGLPDGSITHYGLNGDVNNVLMMADIVLYGSSQEIQSFPPLLIRAMSFGIPIMVPDLPA 465
Query: 537 IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVT 596
+K Y+ +G + F K NP+ L +FS IS+GKLS+FA+++AS+GRL AKN+LA +CVT
Sbjct: 466 LKNYIVDGVHGVIFPKHNPDALLSSFSQMISDGKLSRFAQSIASSGRLLAKNILASECVT 525
Query: 597 RYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRN 656
YA++LENVLNFPSD LPGP+SQLQ +WEWNLFRKE+ + T D +E +T S+
Sbjct: 526 GYAQLLENVLNFPSDVKLPGPVSQLQLGAWEWNLFRKEM-VKTIDENADNEERIATISK- 583
Query: 657 SSVVDLLEEEFTKNI-----TENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEE 711
+SV+ LE + T ++ +ENEN + +QD + DWD+L IES+EEYE +EME+ +E
Sbjct: 584 ASVIFALEAQLTNSVNLTILSENENGTLEQDIPTPQDWDILEKIESAEEYETVEMEEFQE 643
Query: 712 RMDGTFASWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGS 771
RM+ +WD+IYRNARKSE+ KFE+NERDEGELERTGQ V IYEIYSG+GAWPF+HHGS
Sbjct: 644 RMERDLGAWDEIYRNARKSEKLKFESNERDEGELERTGQTVSIYEIYSGAGAWPFMHHGS 703
Query: 772 LYRGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIG 831
LYRGL+LS+ A RL+SDDV+AV RL LL+ ++Y D LCEIGGMF+IANK+DNIHKRPWIG
Sbjct: 704 LYRGLSLSTRALRLKSDDVNAVGRLPLLDDSYYLDALCEIGGMFAIANKIDNIHKRPWIG 763
Query: 832 FQSWRAAGRKVSLSISAEKVLEETVQET-EGDVMYFWAHLDMDGGFTRNNNDVLTFWSMC 890
FQSW+A+GRKVSL AE VLE+T+Q+ +GDV+YFWAHL ++ G TFWS+C
Sbjct: 764 FQSWQASGRKVSLGKKAENVLEDTIQDNPKGDVIYFWAHLQVNRGTIPP-----TFWSVC 818
Query: 891 DILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSR 950
DILNGG CRT F FR+M+GL S++ ALPPMPEDGG WSALH WVM TPSFLEFIMFSR
Sbjct: 819 DILNGGLCRTTFRSTFREMFGLSSNMGALPPMPEDGGHWSALHSWVMPTPSFLEFIMFSR 878
Query: 951 MFVDSLDALNANSSKVNSCLLSSSELE---KKHCYCRVLELLVNVWAYHSGRKMVYLDPL 1007
MF LDALN N S+ N CLL+SSE+E +KHCYCR+LE+LVNVWAYHSGR+MVY++P
Sbjct: 879 MFTHYLDALNRNQSQPNGCLLASSEIEVRIQKHCYCRILEMLVNVWAYHSGRRMVYINPH 938
Query: 1008 SGSLQEQHPIERRRGFMWMKYFNFTLLKSMDEDLAEAADDGDYPREKWLWPWTGEVHWKG 1067
SG L+EQHP+E+R+ FMW KYFNFTLLKSMDEDLAEAADD + LWP TGEVHW+G
Sbjct: 939 SGFLEEQHPVEQRKEFMWAKYFNFTLLKSMDEDLAEAADDEGGSGKIGLWPLTGEVHWQG 998
Query: 1068 IYEREREERYRQKMDKKRKMKEKMFDRLTKGYRQKTLGG 1106
IYEREREERYR KMDKKR K K+ +R+ GY+QK+LGG
Sbjct: 999 IYEREREERYRVKMDKKRTTKVKLMERMKFGYKQKSLGG 1037
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1106 | ||||||
| TAIR|locus:2184437 | 1050 | AT5G04480 [Arabidopsis thalian | 0.906 | 0.955 | 0.559 | 5.8e-311 | |
| TAIR|locus:2124953 | 1031 | AT4G01210 [Arabidopsis thalian | 0.309 | 0.331 | 0.468 | 6.6e-162 |
| TAIR|locus:2184437 AT5G04480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2983 (1055.1 bits), Expect = 5.8e-311, P = 5.8e-311
Identities = 579/1035 (55%), Positives = 719/1035 (69%)
Query: 84 HSIRDRFRFKRNPNHTQDKTQTKPSLHRYLLRHR--HVXXXXXXXXXXXXGPRFNRKGFS 141
HSIRDR R KRN + +D++ + L R LR R H+ G NRKG
Sbjct: 36 HSIRDRLRLKRNSSDRRDRSHS--GLDRPSLRTRPHHI------------GRSLNRKGLL 81
Query: 142 SLFPFRGAYLLYFMIFLAVFAFAMASMVLQNSIASVFGAERGRPIREELRFGSRLKFVPD 201
SL RG LLYF++ V AF M+S++LQNSI G +G +R ++ GS LK+VP
Sbjct: 82 SLLKPRGTCLLYFLVAFTVCAFVMSSLLLQNSITWQ-GNVKGGQVRSQIGLGSTLKYVPG 140
Query: 202 QVGF----GNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKI 257
+ G GLD LRS R GVRPPR+ L+LGNM KD R+L+L+TV+KNLQKLGYVFK+
Sbjct: 141 GIARTLIEGKGLDPLRSAVRIGVRPPRLALVLGNMKKDPRTLMLVTVMKNLQKLGYVFKV 200
Query: 258 YAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSI 317
+AV +G + SLWEQ+AG + +L EQ DW+IF+G+IADSLEAKEAISSLMQEPF S+
Sbjct: 201 FAVENGEARSLWEQLAGHVKVLVSEQLGHADWTIFEGVIADSLEAKEAISSLMQEPFRSV 260
Query: 318 PLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFF 377
PL+WI+ ED LANRLPVY G +L+S+W+S F+R +V+VFP +TLPML+SVLD GNF
Sbjct: 261 PLIWIVHEDILANRLPVYQRMGQNSLISHWRSAFARADVVVFPQFTLPMLHSVLDDGNFV 320
Query: 378 VIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDV 437
VIP S DVWA E+YS++H K LR+ N F +D+++++V+GSSFFY+E SWD AVAMH +
Sbjct: 321 VIPESVVDVWAAESYSETHTKQNLREINEFGEDDVIILVLGSSFFYDEFSWDNAVAMHML 380
Query: 438 GPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGV 497
GPLL +Y RR GSFKFVFL GNST G +DA+QEVASRLGL E +VRH+G N DVN V
Sbjct: 381 GPLLTRYGRRKDTSGSFKFVFLYGNSTKGQSDAVQEVASRLGLTEGTVRHFGLNEDVNRV 440
Query: 498 LLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEG 557
L MADI++Y SSQ EQ FP LIVRAM+FGIP+ITPDFPI+K+Y+A+ IFF++++P+
Sbjct: 441 LRMADILVYASSQEEQNFPPLIVRAMSFGIPIITPDFPIMKKYMADEVHGIFFRRNDPDA 500
Query: 558 LSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPGP 617
L +AFS IS+G+LSKFA+T+AS+GRL KN++A +C+T YAR+LEN+L+FPSD LPG
Sbjct: 501 LLKAFSPLISDGRLSKFAQTIASSGRLLTKNLMATECITGYARLLENMLHFPSDTFLPGS 560
Query: 618 ISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEF-----TKNIT 672
ISQLQ +WEWN FR E++ IL+ S +V +EE+F + N
Sbjct: 561 ISQLQVAAWEWNFFRSELEQPKSFILD----SAYAFIGKSGIVFQVEEKFMGVIESTNPV 616
Query: 673 ENENRSADQDTISELDWDVLHDIXXXXXXXXXXXXXXXXXXDGTFASWDDIYRNARKSER 732
+N + S+LDWDVL +I + W++IYRNARKSE+
Sbjct: 617 DNNTLFVSDELPSKLDWDVLEEIEGAEEYEKVESEELEDRMERDVEDWEEIYRNARKSEK 676
Query: 733 FKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGXXXXXXXXXXXXXXXXX 792
KFE NERDEGELERTG+P+CIYEIY+G+GAWPFLHHGSLYRG
Sbjct: 677 LKFEVNERDEGELERTGEPLCIYEIYNGAGAWPFLHHGSLYRGLSLSSKDRRLSSDDVDA 736
Query: 793 XXXLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKVL 852
L LLN T+YRDILCEIGGMFS+ANKVD+IH RPWIGFQSWRAAGRKVSLS AE+ L
Sbjct: 737 ADRLPLLNDTYYRDILCEIGGMFSVANKVDSIHMRPWIGFQSWRAAGRKVSLSSKAEESL 796
Query: 853 EETV-QETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMYG 911
E + QET+G+++YFW LD+DG + N LTFWSMCDILN G+CRT FEDAFR MYG
Sbjct: 797 ENIIKQETKGEIIYFWTRLDIDGDAYGSKN-ALTFWSMCDILNQGNCRTTFEDAFRHMYG 855
Query: 912 LPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNAXXXXXXXXXX 971
LP H+EALPPMPEDG WS+LH WVM TPSFLEF+MFSRMF +SLDAL+
Sbjct: 856 LPEHIEALPPMPEDGHHWSSLHNWVMPTPSFLEFVMFSRMFSESLDALHNNLNDSKSCSL 915
Query: 972 XXXXXXXXHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGFMWMKYFNF 1031
HCYCRVLELLVNVWAYHSGRKMVY++P GSL+EQHP+++R+G MW KYFNF
Sbjct: 916 ASSLLERKHCYCRVLELLVNVWAYHSGRKMVYINPRDGSLEEQHPLQQRKGLMWAKYFNF 975
Query: 1032 TLLKSMXXXXXXXXXXXXYPREKWLWPWTGEVHWKGIXXXXXXXXXXQXXXXXXXXXXXX 1091
TLLKSM +PRE+WLWP TGEVHWKG+
Sbjct: 976 TLLKSMDEDLAEAADDKDHPRERWLWPLTGEVHWKGVYEREREERYRLKMDKKRKTKEKL 1035
Query: 1092 FDRLTKGYRQKTLGG 1106
+DR+ GY+QK+LGG
Sbjct: 1036 YDRIKNGYKQKSLGG 1050
|
|
| TAIR|locus:2124953 AT4G01210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 873 (312.4 bits), Expect = 6.6e-162, Sum P(2) = 6.6e-162
Identities = 164/350 (46%), Positives = 213/350 (60%)
Query: 719 SWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGXXX 778
+W+D+Y++A++++R K + +ERDEGEL RTGQP+CIYE Y G G W FLH LYRG
Sbjct: 627 TWEDVYKSAKRADRSKNDLHERDEGELLRTGQPLCIYEPYFGEGTWSFLHQDPLYRGVGL 686
Query: 779 XXXXXXXXXXXXXXXXXLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAA 838
L L N +YRD L + G F+I+NK+D +HK WIGFQSWRA
Sbjct: 687 SVKGRRPRMDDVDASSRLPLFNNPYYRDALGDFGAFFAISNKIDRLHKNSWIGFQSWRAT 746
Query: 839 GRKVSLSISAEKVLEETVQETE-GDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGH 897
RK SLS AE L +Q + GD +YFW +D D RN FWS CD +N G+
Sbjct: 747 ARKESLSKIAEDALLNAIQTRKHGDALYFWVRMDKD---PRNPLQK-PFWSFCDAINAGN 802
Query: 898 CRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLD 957
CR A+ + ++MY + ++++LPPMPEDG WS + W + T SFLEF+MFSRMFVDSLD
Sbjct: 803 CRFAYNETLKKMYSI-KNLDSLPPMPEDGDTWSVMQSWALPTRSFLEFVMFSRMFVDSLD 861
Query: 958 ALNAXXXXXXXXXXXXXXXXXXHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPI 1017
A HCY RVLELLVNVWAYHS R++VY+DP +G +QEQH
Sbjct: 862 A-QIYEEHHRTNRCYLSLTKDKHCYSRVLELLVNVWAYHSARRIVYIDPETGLMQEQHKQ 920
Query: 1018 ERRRGFMWMKYFNFTLLKSMXXXXXXXXXXXXYPREKWLWPWTGEVHWKG 1067
+ RRG MW+K+F++T LK+M WLWPWTGE+ W+G
Sbjct: 921 KNRRGKMWVKWFDYTTLKTMDEDLAEEADSDRRVGH-WLWPWTGEIVWRG 969
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1106 | |||
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 7e-11 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 4e-08 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 2e-06 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 7e-06 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 2e-05 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 1e-04 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 2e-04 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 6e-04 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 0.001 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 0.001 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 0.004 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 7e-11
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 440 LLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF--NGDVNGV 497
LL++ + + + G+ L+++A +LGL ++ V GF + D+ +
Sbjct: 19 LLLEAFALLKEQHPNLKLVIVGD--GEEEKKLKKLALKLGLEDN-VIFVGFVPDEDLIEL 75
Query: 498 LLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEG 557
+AD+ + S+ E GF +++ AM G+PVI D E V +G + + E
Sbjct: 76 YRIADLFVL-PSRYE-GFGLVLLEAMAAGVPVIATDVGGPAEIVKDGETGLLVDPGDAEA 133
Query: 558 LSRAFSLFISNGKLSK 573
L+ A + + +L +
Sbjct: 134 LAEAIEKLLKDEELRE 149
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 56.5 bits (135), Expect = 4e-08
Identities = 32/146 (21%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 465 DGYNDALQEVASRLGLLEHSVRHYGF--NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRA 522
+ L+++A +LGL ++ V+ G+ + ++ +L AD+ + S + +GF +++ A
Sbjct: 240 PERREELEKLAKKLGLEDN-VKFLGYVPDEELAELLASADVFVLPS--LSEGFGLVLLEA 296
Query: 523 MTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAG 582
M G PVI D I E V +G + + E L+ A + + +L + A
Sbjct: 297 MAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPEL---REELGEAA 353
Query: 583 RLHAKNMLALD-CVTRYARILENVLN 607
R + + + + + E +L
Sbjct: 354 RERVEEEFSWERIAEQLLELYEELLA 379
|
Length = 381 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 2e-06
Identities = 61/262 (23%), Positives = 101/262 (38%), Gaps = 39/262 (14%)
Query: 334 VYVERGFQNLLSYW--KSVFSRVNVIVF---PDYTLPMLYSVLDAGNFFVIPGSPADVWA 388
V+ G + L + + ++F D L + ++ +IPGS D+
Sbjct: 117 VFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDL-- 174
Query: 389 VEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARR- 447
+ +S S E +D+ V + V L D + L++ AR
Sbjct: 175 -DRFSPSPEPI--------PEDDPVFLFVA------RLLKDKGIDE------LLEAARIL 213
Query: 448 NSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADI-VLY 506
+ + + + L G+ + A+ E+ LE V GF DV +L AD+ VL
Sbjct: 214 KAKGPNVRLL-LVGDGDEENPAAILEIEKLG--LEGRVEFLGFRDDVPELLAAADVFVL- 269
Query: 507 GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI 566
S E G P +++ AM G PVI D P +E V +G + E L+ A I
Sbjct: 270 -PSYRE-GLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLI 327
Query: 567 SNGKLSKFARTVASAGRLHAKN 588
+ +L + A R A+
Sbjct: 328 EDPEL---RARMGQAARKRAEE 346
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 7e-06
Identities = 51/216 (23%), Positives = 83/216 (38%), Gaps = 41/216 (18%)
Query: 400 QLRKENGFLKDEIVVVVVGSSFFYNELSW----DYAV-AMHDVGPLLIKYARRNSVEGSF 454
R+ G +DE V++ VG L D + A+ L K
Sbjct: 188 AARRRLGIPEDEPVILFVGR------LVPRKGVDLLLEAL----AKLRKEYPD------V 231
Query: 455 KFVFLCGNSTDG-YNDALQEVASRLGLLEHSVRHYGFNG-----DVNGVLLMADIVLYGS 508
+ V + G DG + L+ +A+ LGL + V F G D+ + AD+ +
Sbjct: 232 RLV-IVG---DGPLREELEALAAELGLGDR-VT---FLGFVPDEDLPALYAAADVFVL-P 282
Query: 509 SQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 568
S E GF +++ AM G+PV+ D I E V +G + +PE L+ A + +
Sbjct: 283 SLYE-GFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDD 341
Query: 569 GKLSKFARTVASAGRLHAKNMLALD-CVTRYARILE 603
+L R + A R + D R +
Sbjct: 342 PEL---RRRLGEAARERVAERFSWDRVAARTEEVYY 374
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-05
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 469 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADI-VLYGSSQVEQGFPSLIVRAMTFGI 527
+ L+ +A LGL V GF + L AD+ VL SS+ E GFP++++ AM G
Sbjct: 233 EELEALAKELGL-ADRVHFLGFQSNPYPYLKAADLFVL--SSRYE-GFPNVLLEAMALGT 288
Query: 528 PVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRA 561
PV+ D P +E + +G + + L+ A
Sbjct: 289 PVVATDCPGPREILEDGENGLLVPVGDEAALAAA 322
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 1e-04
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 465 DGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM---ADIVLYGSSQVEQGFPSLIVR 521
+ L+E+ + L LL+ V G + L+ AD+ + S E GF +++
Sbjct: 144 GPEREYLEELLAALLLLDR-VIFLGGLDPEELLALLLAAADVFVL-PSLRE-GFGLVVLE 200
Query: 522 AMTFGIPVITPDFPIIKEYVAEGAQVIFF 550
AM G+PVI D E V +G +
Sbjct: 201 AMACGLPVIATDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 2e-04
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 13/152 (8%)
Query: 454 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADI-VLYGSSQVE 512
+ + L G+ D L+ +A + LE V G DV +L D+ VL SS E
Sbjct: 225 ARLL-LVGDGPD--RANLELLALKELGLEDKVILLGERSDVPALLNALDVFVL--SSLSE 279
Query: 513 QGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLS 572
GFP++++ AM G+PV+ D E V G +PE L+ A +++ L
Sbjct: 280 -GFPNVLLEAMACGLPVVATDVGDNAELV--GDTGFLVPPGDPEALAEAIEALLADPAL- 335
Query: 573 KFARTVASAGRLHAKNMLALD-CVTRYARILE 603
+ + A R + +++ V Y +
Sbjct: 336 --RQALGEAARERIEENFSIEAMVEAYEELYR 365
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 6e-04
Identities = 32/147 (21%), Positives = 56/147 (38%), Gaps = 15/147 (10%)
Query: 454 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVN--GVLLMADIVLYGSSQV 511
+ V + G GY L+++A+ LGL E V G + L AD+ + S
Sbjct: 235 WHLV-IAGPDEGGYRAELKQIAAALGL-EDRVTFTGMLYGEDKAAALADADLFVLPSHS- 291
Query: 512 EQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKL 571
+ F ++ A+ G PV+T D +E + G + D+ + L+ A + +
Sbjct: 292 -ENFGIVVAEALACGTPVVTTDKVPWQELIEYGCGWVV--DDDVDALAAALRRALELPQR 348
Query: 572 SKFARTVASAGRL-------HAKNMLA 591
K A A+ +L
Sbjct: 349 LKAMGENGRALVEERFSWTAIAQQLLE 375
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 0.001
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 469 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADI-VLYGSSQVEQGFPSLIVRAMTFGI 527
+AL+ + LGL E V GF ++ A I VL +S+ E GFP +++ AM FG+
Sbjct: 222 EALEALIKELGL-EDRVILLGFTKNIEEYYAKASIFVL--TSRFE-GFPMVLLEAMAFGL 277
Query: 528 PVITPDFP-----IIKE----YVAEGAQVIFFQKDNPEGLSRAFSLFISNGKL 571
PVI+ D P II++ + + E L+ A + + +L
Sbjct: 278 PVISFDCPTGPSEIIEDGVNGLLVPN--------GDVEALAEALLRLMEDEEL 322
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 0.001
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 7/138 (5%)
Query: 470 ALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPV 529
A +++ GL H V G DV ++ D+ + S + +G + I+ AM G+PV
Sbjct: 243 ACEQMVRAAGL-AHLVWLPGERDDVPALMQALDLFVLPS--LAEGISNTILEAMASGLPV 299
Query: 530 ITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNM 589
I E V G + L+RA ++S+ R +AGR A+
Sbjct: 300 IATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAA---RRAHGAAGRARAEQQ 356
Query: 590 LALDC-VTRYARILENVL 606
+++ V YA + + +L
Sbjct: 357 FSINAMVAAYAGLYDQLL 374
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.004
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 469 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADI-VLYGSSQVEQGFPSLIVRAMTFGI 527
L+ + LGL + V+ G D+ AD+ VL SS E GF ++ AM +
Sbjct: 232 ATLERLIKALGL-SNRVKLLGLRDDIAAYYNAADLFVL--SSAWE-GFGLVVAEAMACEL 287
Query: 528 PVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRA 561
PV+ D ++E V + ++ +PE L+
Sbjct: 288 PVVATDAGGVREVVGDSGLIV--PISDPEALANK 319
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1106 | |||
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.98 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.98 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.98 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.98 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.98 | |
| PLN02316 | 1036 | synthase/transferase | 99.97 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.97 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.97 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.97 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.97 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.97 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.97 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.97 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.97 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.97 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.97 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.97 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.97 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.97 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.97 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.97 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.97 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.97 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.97 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.97 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.97 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.97 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.96 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.96 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.96 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.96 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.96 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.96 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.96 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.96 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.95 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.95 | |
| PLN00142 | 815 | sucrose synthase | 99.95 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.95 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.95 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.94 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.94 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.94 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.92 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.92 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.92 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.92 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.91 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.91 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.9 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.89 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.89 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.88 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.87 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.87 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.87 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.86 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.84 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.84 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.83 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.83 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.81 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.77 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.76 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.76 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.74 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.74 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.73 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.67 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.66 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.64 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.64 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.58 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.56 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.5 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.46 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.41 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.39 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.35 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.21 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.12 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.04 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.01 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.92 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 98.85 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 98.83 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.83 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.81 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 98.81 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.69 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 98.67 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.65 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 98.58 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.57 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 98.57 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.54 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.52 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.49 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 98.44 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.39 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.37 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.33 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.32 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 98.26 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.22 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.18 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.01 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 97.91 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.85 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 97.8 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 97.51 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.45 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.41 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 97.4 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.38 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 97.15 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 97.01 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 96.83 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 96.73 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 96.68 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 96.6 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.59 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 96.52 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 96.44 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 95.78 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 95.76 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 95.55 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 95.53 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 95.26 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 95.06 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 94.79 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 94.78 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 94.73 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 94.63 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 94.44 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 94.4 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 94.34 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 94.24 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 94.11 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 94.07 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 93.68 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 92.83 | |
| PF04230 | 286 | PS_pyruv_trans: Polysaccharide pyruvyl transferase | 92.68 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 92.61 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 92.57 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 92.29 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 92.28 | |
| PLN02764 | 453 | glycosyltransferase family protein | 91.37 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 91.24 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 90.79 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 89.66 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 89.1 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 88.92 | |
| PLN00414 | 446 | glycosyltransferase family protein | 88.47 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 88.46 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 88.17 | |
| PLN02208 | 442 | glycosyltransferase family protein | 87.94 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 86.24 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 86.19 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 85.0 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 83.51 | |
| PF15024 | 559 | Glyco_transf_18: Glycosyltransferase family 18 | 82.69 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 82.36 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 81.86 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 81.19 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 80.43 |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=332.52 Aligned_cols=383 Identities=19% Similarity=0.193 Sum_probs=315.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCcCCCCCccccccccceeeeecccCCC--CCccccccCCCCCCCCCCEEEEE
Q 001292 151 LLYFMIFLAVFAFAMASMVLQNSIASVFGAERGRPIREELRFGSRLKFVPDQVGF--GNGLDGLRSTPRFGVRPPRIGLI 228 (1106)
Q Consensus 151 ~~y~ll~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ger~gf~~~~~~~--~~~~~ha~Sv~r~g~r~~RIalV 228 (1106)
++|++|+++++|| ++.+++||+.+.|.|++| |+|||||.++...+ +.+|.|++||
T Consensus 3 ~lY~~l~~~~~p~-~~~~l~~R~~~~~~y~~r---------~~eRfg~~~~~~~~~~p~vWiHaaSV------------- 59 (419)
T COG1519 3 FLYRLLLTLALPF-IAPRLLYRSFKGPKYRKR---------LGERFGFYKPPVKPEGPLVWIHAASV------------- 59 (419)
T ss_pred hHHHHHHHHHHHH-HHHHHHHHhhcChHHHHH---------HHHHhcccCCCCCCCCCeEEEEecch-------------
Confidence 6899999999999 999999999999999999 89999988877754 6779999999
Q ss_pred eCCCCCChhHHHHHHHHHHHHHC--CCEEEEEEcCCCCchHHHHHHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhh
Q 001292 229 LGNMAKDSRSLLLITVVKNLQKL--GYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAI 306 (1106)
Q Consensus 229 lg~L~~gGesl~vv~LakaLqe~--GyeVtV~t~~dg~~~~i~r~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~i 306 (1106)
|+++++.+|+++|+++ ++.|.++++++++.+.....++.. -..+|.++|.......|+..+.++.++
T Consensus 60 -------GEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~----v~h~YlP~D~~~~v~rFl~~~~P~l~I 128 (419)
T COG1519 60 -------GEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDS----VIHQYLPLDLPIAVRRFLRKWRPKLLI 128 (419)
T ss_pred -------hHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCC----eEEEecCcCchHHHHHHHHhcCCCEEE
Confidence 9999999999999999 999999999998887776665533 234777888888888888888888877
Q ss_pred hhcccCC---------CCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhhhcCCCCCCEE
Q 001292 307 SSLMQEP---------FHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFF 377 (1106)
Q Consensus 307 dII~te~---------~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~~~gi~~~KI~ 377 (1106)
++++|. ..++|++.. |++++.++.. ++.++....+..++..|.|++++..+.+++..+...++.
T Consensus 129 -i~EtElWPnli~e~~~~~~p~~Lv--NaRLS~rS~~----~y~k~~~~~~~~~~~i~li~aQse~D~~Rf~~LGa~~v~ 201 (419)
T COG1519 129 -IMETELWPNLINELKRRGIPLVLV--NARLSDRSFA----RYAKLKFLARLLFKNIDLILAQSEEDAQRFRSLGAKPVV 201 (419)
T ss_pred -EEeccccHHHHHHHHHcCCCEEEE--eeeechhhhH----HHHHHHHHHHHHHHhcceeeecCHHHHHHHHhcCCcceE
Confidence 888887 679999988 9999988763 124445555678899999999999999986655556699
Q ss_pred EeCCCCCCcccccccCcc--hhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeE
Q 001292 378 VIPGSPADVWAVEAYSKS--HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFK 455 (1106)
Q Consensus 378 VIpN~GVDl~~~e~F~ps--~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~Pdik 455 (1106)
+..|.++|+ ...+. .....+|.+++.+ +++|+++| +|+| +.+.++++++.|++.+ |+..
T Consensus 202 v~GNlKfd~----~~~~~~~~~~~~~r~~l~~~--r~v~iaaS----TH~G--Eeei~l~~~~~l~~~~-------~~~l 262 (419)
T COG1519 202 VTGNLKFDI----EPPPQLAAELAALRRQLGGH--RPVWVAAS----THEG--EEEIILDAHQALKKQF-------PNLL 262 (419)
T ss_pred EecceeecC----CCChhhHHHHHHHHHhcCCC--CceEEEec----CCCc--hHHHHHHHHHHHHhhC-------CCce
Confidence 999999997 33332 2446778887764 78999998 7877 8899999998887644 7875
Q ss_pred EEEEEcCCCCccHHHHHHHHHHcCC------------CCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHH
Q 001292 456 FVFLCGNSTDGYNDALQEVASRLGL------------LEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAM 523 (1106)
Q Consensus 456 fLIIVG~GperY~eeLkeLaeklGL------------~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAM 523 (1106)
||+|++||++ ++.+++++++.|+ .+++|.+.+.++++..+|+.|||.|+++++. +-+|+++||++
T Consensus 263 -lIlVPRHpER-f~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv-~~GGHN~LEpa 339 (419)
T COG1519 263 -LILVPRHPER-FKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLV-PIGGHNPLEPA 339 (419)
T ss_pred -EEEecCChhh-HHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCccc-CCCCCChhhHH
Confidence 8999999999 9999999999988 3357999999999999999999999999987 68999999999
Q ss_pred HhCCCEEec----CCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHH
Q 001292 524 TFGIPVITP----DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYA 599 (1106)
Q Consensus 524 A~G~PVIAS----D~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~ 599 (1106)
++|+|||++ |+..+.+.+.....|+.+ +|.+.|++++..+++|++. +.+|++++..+++++-- ..+++.
T Consensus 340 ~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v--~~~~~l~~~v~~l~~~~~~---r~~~~~~~~~~v~~~~g--al~r~l 412 (419)
T COG1519 340 AFGTPVIFGPYTFNFSDIAERLLQAGAGLQV--EDADLLAKAVELLLADEDK---REAYGRAGLEFLAQNRG--ALARTL 412 (419)
T ss_pred HcCCCEEeCCccccHHHHHHHHHhcCCeEEE--CCHHHHHHHHHHhcCCHHH---HHHHHHHHHHHHHHhhH--HHHHHH
Confidence 999999997 566777777555455555 5788899999999998776 68999999999877543 334444
Q ss_pred HHHH
Q 001292 600 RILE 603 (1106)
Q Consensus 600 eLye 603 (1106)
+.++
T Consensus 413 ~~l~ 416 (419)
T COG1519 413 EALK 416 (419)
T ss_pred HHhh
Confidence 4443
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=316.28 Aligned_cols=349 Identities=17% Similarity=0.182 Sum_probs=262.1
Q ss_pred CCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCC-chHHHH------------------HHhHHHHHhhcc
Q 001292 222 PPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN-SHSLWE------------------QIAGQISILGQE 282 (1106)
Q Consensus 222 ~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~-~~~i~r------------------~lg~lvkiIr~~ 282 (1106)
+++|++|+..+..||.+.++.++++.|.+.|+++.|++..+.. ...... ....+.++++..
T Consensus 1 ~~~il~ii~~~~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~l~~~ 80 (374)
T TIGR03088 1 RPLIVHVVYRFDVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRKRIQRPDVAFYALHKQPGKDVAVYPQLYRLLRQL 80 (374)
T ss_pred CceEEEEeCCCCCCcHHHHHHHHHhhccccccceEEEEcCCCChhHHHHHhcCceEEEeCCCCCCChHHHHHHHHHHHHh
Confidence 4799999999999999999999999999999999888865422 111111 111245667778
Q ss_pred CccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcE-EEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecC
Q 001292 283 QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPL-VWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPD 361 (1106)
Q Consensus 283 ~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPV-I~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S 361 (1106)
++|+||.+.....+. .+..+. .++|+ +++.|+............ ..++.+ .....+|.+++.+
T Consensus 81 ~~Divh~~~~~~~~~-~~~~~~----------~~~~~~i~~~h~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~i~vs 144 (374)
T TIGR03088 81 RPDIVHTRNLAALEA-QLPAAL----------AGVPARIHGEHGRDVFDLDGSNWK---YRWLRR--LYRPLIHHYVAVS 144 (374)
T ss_pred CCCEEEEcchhHHHH-HHHHHh----------cCCCeEEEeecCcccccchhhHHH---HHHHHH--HHHhcCCeEEEeC
Confidence 999999987654332 222221 34554 555555322111100000 111111 1234678889988
Q ss_pred CChhhh---hcCCCCCCEEEeCCCCCCcccccccCcch-hHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHH
Q 001292 362 YTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSH-EKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDV 437 (1106)
Q Consensus 362 ~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~ps~-s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~ 437 (1106)
....+. ..+.+..++.+|+| |+|. +.|.+.. .....+......++.++|+++||+.+ .||++.+++|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~vi~n-gvd~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~----~Kg~~~li~a~ 216 (374)
T TIGR03088 145 RDLEDWLRGPVKVPPAKIHQIYN-GVDT---ERFHPSRGDRSPILPPDFFADESVVVGTVGRLQA----VKDQPTLVRAF 216 (374)
T ss_pred HHHHHHHHHhcCCChhhEEEecc-Cccc---cccCCCccchhhhhHhhcCCCCCeEEEEEecCCc----ccCHHHHHHHH
Confidence 765554 23567788999998 8997 5565542 22233334444567889999999988 99999999999
Q ss_pred HHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcH
Q 001292 438 GPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPS 517 (1106)
Q Consensus 438 k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGl 517 (1106)
+.+.++.. ...++++ |+++|+|+.. +.++++++.+++.+ +|.|.|+.+++..+|+.||++|+||..| |||+
T Consensus 217 ~~l~~~~~---~~~~~~~-l~i~G~g~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adi~v~pS~~E--g~~~ 287 (374)
T TIGR03088 217 ALLVRQLP---EGAERLR-LVIVGDGPAR--GACEQMVRAAGLAH-LVWLPGERDDVPALMQALDLFVLPSLAE--GISN 287 (374)
T ss_pred HHHHHhCc---ccccceE-EEEecCCchH--HHHHHHHHHcCCcc-eEEEcCCcCCHHHHHHhcCEEEeccccc--cCch
Confidence 88875431 1125787 6889999875 88999999999987 8999999999999999999999999886 9999
Q ss_pred HHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH-HHHHH
Q 001292 518 LIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA-LDCVT 596 (1106)
Q Consensus 518 vLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fs-ee~v~ 596 (1106)
+++||||||+|||+++.+|++|++.++.+|++++++|+++++++|..++++++. +.+++++|++.+.+.|+ +.++.
T Consensus 288 ~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~---~~~~~~~a~~~~~~~fs~~~~~~ 364 (374)
T TIGR03088 288 TILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAA---RRAHGAAGRARAEQQFSINAMVA 364 (374)
T ss_pred HHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999887 68899999999876665 56666
Q ss_pred HHHHHHHHHh
Q 001292 597 RYARILENVL 606 (1106)
Q Consensus 597 ~Y~eLyeslL 606 (1106)
+|.++|++++
T Consensus 365 ~~~~~y~~~~ 374 (374)
T TIGR03088 365 AYAGLYDQLL 374 (374)
T ss_pred HHHHHHHHhC
Confidence 9999998763
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=315.12 Aligned_cols=346 Identities=13% Similarity=0.162 Sum_probs=256.8
Q ss_pred CCCCEEEEEeCCC---CCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchH-----H----------HH-------HHhH
Q 001292 220 VRPPRIGLILGNM---AKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS-----L----------WE-------QIAG 274 (1106)
Q Consensus 220 ~r~~RIalVlg~L---~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~-----i----------~r-------~lg~ 274 (1106)
.+++||++++... ..+|.+..+.++++.|.++||+|+|++..++.... + +. ....
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~ 135 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVPQEFHGAKVIGSWSFPCPFYQKVPLSLALSPR 135 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCCCccccCceeeccCCcCCccCCCceeeccCCHH
Confidence 6788999996432 45898999999999999999999999875432100 0 00 0001
Q ss_pred HHHHhhccCccEEEEccccHHHHHH-HHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHH-HHHHHHhc
Q 001292 275 QISILGQEQYSLIDWSIFDGIIADS-LEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLL-SYWKSVFS 352 (1106)
Q Consensus 275 lvkiIr~~~pDiIh~~~~~~i~v~~-La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~glekli-s~~~~~l~ 352 (1106)
+.+.++..+||+||++......+.. +..+ ..++|+|+++|+.... ....+......+.+ ...+..++
T Consensus 136 l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak----------~~~ip~V~~~h~~~~~-~~~~~~~~~~~~~~~~~~r~~~~ 204 (465)
T PLN02871 136 IISEVARFKPDLIHASSPGIMVFGALFYAK----------LLCVPLVMSYHTHVPV-YIPRYTFSWLVKPMWDIIRFLHR 204 (465)
T ss_pred HHHHHHhCCCCEEEECCCchhHHHHHHHHH----------HhCCCEEEEEecCchh-hhhcccchhhHHHHHHHHHHHHh
Confidence 4566777899999998754333222 2222 1578999999974211 11111110111111 11233567
Q ss_pred cccEEEecCCChhhh--hcC-CCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcC-CCCCcEEEEEEcccCccccccC
Q 001292 353 RVNVIVFPDYTLPML--YSV-LDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENG-FLKDEIVVVVVGSSFFYNELSW 428 (1106)
Q Consensus 353 ~AD~VIa~S~~~~~~--~~g-i~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lG-L~~d~~VIL~VGRl~~y~kg~K 428 (1106)
.+|.+++++...... ..+ .+..++.+||| |+|. +.|.+.......+.++. ..++.++|+++||+.. .|
T Consensus 205 ~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~n-Gvd~---~~f~p~~~~~~~~~~~~~~~~~~~~i~~vGrl~~----~K 276 (465)
T PLN02871 205 AADLTLVTSPALGKELEAAGVTAANRIRVWNK-GVDS---ESFHPRFRSEEMRARLSGGEPEKPLIVYVGRLGA----EK 276 (465)
T ss_pred hCCEEEECCHHHHHHHHHcCCCCcCeEEEeCC-ccCc---cccCCccccHHHHHHhcCCCCCCeEEEEeCCCch----hh
Confidence 899999998765544 222 34678999998 8998 67766543445565553 3457889999999887 88
Q ss_pred CHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEE
Q 001292 429 DYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLY 506 (1106)
Q Consensus 429 g~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~ 506 (1106)
+.+.++++++.+ ++++ |+|+|+|+.. +.++++++. . +|.|+|+. +++..+|+.||++|+
T Consensus 277 ~~~~li~a~~~~-----------~~~~-l~ivG~G~~~--~~l~~~~~~----~-~V~f~G~v~~~ev~~~~~~aDv~V~ 337 (465)
T PLN02871 277 NLDFLKRVMERL-----------PGAR-LAFVGDGPYR--EELEKMFAG----T-PTVFTGMLQGDELSQAYASGDVFVM 337 (465)
T ss_pred hHHHHHHHHHhC-----------CCcE-EEEEeCChHH--HHHHHHhcc----C-CeEEeccCCHHHHHHHHHHCCEEEE
Confidence 999999888543 5677 6899999865 888887762 2 69999976 789999999999999
Q ss_pred ccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhcc---CCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Q 001292 507 GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE---GAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGR 583 (1106)
Q Consensus 507 PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~D---g~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Ar 583 (1106)
||..| +||++++||||||+|||+++.+|+.|++.+ +.+|++++++|+++|+++|.++++|+++ +++|+++++
T Consensus 338 pS~~E--~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~---~~~~~~~a~ 412 (465)
T PLN02871 338 PSESE--TLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPEL---RERMGAAAR 412 (465)
T ss_pred CCccc--ccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHH
Confidence 99886 999999999999999999999999999998 9999999999999999999999999987 688999999
Q ss_pred HHHHHhcHHHHHHHHHH-HHHHHhcC
Q 001292 584 LHAKNMLALDCVTRYAR-ILENVLNF 608 (1106)
Q Consensus 584 e~ake~fsee~v~~Y~e-LyeslLk~ 608 (1106)
+.++++.|+..+.++.+ .|+.++..
T Consensus 413 ~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 413 EEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 99988888888878876 68776654
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-32 Score=312.28 Aligned_cols=384 Identities=16% Similarity=0.157 Sum_probs=271.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCCCcCCCCCccccccccceeeee-cccC-CCCCccccccCCCCCCCCCCEEEE
Q 001292 150 YLLYFMIFLAVFAFAMASMVLQNSIASVFGAERGRPIREELRFGSRLKFV-PDQV-GFGNGLDGLRSTPRFGVRPPRIGL 227 (1106)
Q Consensus 150 ~~~y~ll~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ger~gf~-~~~~-~~~~~~~ha~Sv~r~g~r~~RIal 227 (1106)
.++|.+++.++.|+ +++++++|+++.+.++++ +.||+|+. .... ..+.+|.||+|+
T Consensus 3 ~~~y~~~~~~~~p~-~~~~~~~~~~~~~~~~~~---------~~~r~~~~~~~~~~~~~~iW~Ha~s~------------ 60 (425)
T PRK05749 3 RLLYTALLYLALPL-ILLRLLLRSRKAPKYRKR---------WGERFGFRKPNPPPKGPLIWFHAVSV------------ 60 (425)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHhccCccchhh---------hccccCCCCCCCCCCCCeEEEEeCCH------------
Confidence 36899999999999 888888888777777655 78999983 2222 234589999999
Q ss_pred EeCCCCCChhHHHHHHHHHHHHHCC--CEEEEEEcCCCCchHHHHHH--------------hHHHHHhhccCccEEEEcc
Q 001292 228 ILGNMAKDSRSLLLITVVKNLQKLG--YVFKIYAVRSGNSHSLWEQI--------------AGQISILGQEQYSLIDWSI 291 (1106)
Q Consensus 228 Vlg~L~~gGesl~vv~LakaLqe~G--yeVtV~t~~dg~~~~i~r~l--------------g~lvkiIr~~~pDiIh~~~ 291 (1106)
|+..++.+|++.|++.+ ++|.+++.++++....-+.. ..+.++++..+||+++++.
T Consensus 61 --------Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~~~~~~~~~~~~~~~~~~~~P~d~~~~~~~~l~~~~Pd~v~~~~ 132 (425)
T PRK05749 61 --------GETRAAIPLIRALRKRYPDLPILVTTMTPTGSERAQALFGDDVEHRYLPYDLPGAVRRFLRFWRPKLVIIME 132 (425)
T ss_pred --------HHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHhcCCCceEEEecCCcHHHHHHHHHhhCCCEEEEEe
Confidence 99999999999999985 56666665554433221111 1145677888999998864
Q ss_pred ccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhh--hc
Q 001292 292 FDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML--YS 369 (1106)
Q Consensus 292 ~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~--~~ 369 (1106)
... +...+.... ..++|++++.| .+..+... ...++....+..++.+|.|+++|...... ..
T Consensus 133 ~~~-~~~~l~~~~---------~~~ip~vl~~~--~~~~~s~~----~~~~~~~~~r~~~~~~d~ii~~S~~~~~~l~~~ 196 (425)
T PRK05749 133 TEL-WPNLIAELK---------RRGIPLVLANA--RLSERSFK----RYQKFKRFYRLLFKNIDLVLAQSEEDAERFLAL 196 (425)
T ss_pred cch-hHHHHHHHH---------HCCCCEEEEec--cCChhhHH----HHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHc
Confidence 432 222222211 26899987633 22222211 00112222345678899999999877765 34
Q ss_pred CCCCCCEEEeCCCCCCcccccccCcc-hhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhc
Q 001292 370 VLDAGNFFVIPGSPADVWAVEAYSKS-HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRN 448 (1106)
Q Consensus 370 gi~~~KI~VIpN~GVDl~~~e~F~ps-~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk 448 (1106)
+++++ +.+++|.++|. ...... .....+|..++ +++++|+++| .+ .|+.+.+++|++.+.++
T Consensus 197 g~~~~-i~vi~n~~~d~---~~~~~~~~~~~~~r~~~~--~~~~vil~~~----~~--~~~~~~ll~A~~~l~~~----- 259 (425)
T PRK05749 197 GAKNE-VTVTGNLKFDI---EVPPELAARAATLRRQLA--PNRPVWIAAS----TH--EGEEELVLDAHRALLKQ----- 259 (425)
T ss_pred CCCCC-cEecccccccC---CCChhhHHHHHHHHHHhc--CCCcEEEEeC----CC--chHHHHHHHHHHHHHHh-----
Confidence 56666 88899866664 211111 22345677776 4667888887 33 35789999999877643
Q ss_pred cCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCC------------CCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCc
Q 001292 449 SVEGSFKFVFLCGNSTDGYNDALQEVASRLGLL------------EHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFP 516 (1106)
Q Consensus 449 ~~~PdikfLIIVG~GperY~eeLkeLaeklGL~------------d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFG 516 (1106)
.|+++ |+|+|+|+++ .++++++++++|+. +++|.+.+..+++..+|+.||+++++++.. |++|
T Consensus 260 --~~~~~-liivG~g~~r-~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S~~-e~~g 334 (425)
T PRK05749 260 --FPNLL-LILVPRHPER-FKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVGGSLV-KRGG 334 (425)
T ss_pred --CCCcE-EEEcCCChhh-HHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEECCCcC-CCCC
Confidence 27887 7899999975 57899999998884 125677777889999999999988765553 4899
Q ss_pred HHHHHHHHhCCCEEecCC-CCchhhhcc-CCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHH
Q 001292 517 SLIVRAMTFGIPVITPDF-PIIKEYVAE-GAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDC 594 (1106)
Q Consensus 517 lvLLEAMA~G~PVIASD~-gGI~EiV~D-g~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~ 594 (1106)
++++||||||+|||+++. ++..+++.. ..+|++++++|+++|+++|..+++|++. +.+|+++|++++.++. ..
T Consensus 335 ~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~~~~---~~~m~~~a~~~~~~~~--~~ 409 (425)
T PRK05749 335 HNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLTDPDA---RQAYGEAGVAFLKQNQ--GA 409 (425)
T ss_pred CCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHhCc--cH
Confidence 999999999999999754 455555443 2468888889999999999999999987 6899999999998763 55
Q ss_pred HHHHHHHHHHHh
Q 001292 595 VTRYARILENVL 606 (1106)
Q Consensus 595 v~~Y~eLyeslL 606 (1106)
.+++.+++...+
T Consensus 410 ~~~~~~~l~~~l 421 (425)
T PRK05749 410 LQRTLQLLEPYL 421 (425)
T ss_pred HHHHHHHHHHhc
Confidence 567777766544
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=299.09 Aligned_cols=344 Identities=15% Similarity=0.152 Sum_probs=259.8
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCc-h-----------------------HHHHHHhHHHHH
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS-H-----------------------SLWEQIAGQISI 278 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~-~-----------------------~i~r~lg~lvki 278 (1106)
+||++++.. ..||.+..+..+++.|.+.||+|+|++...... . ........+.+.
T Consensus 1 mki~~~~~p-~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 79 (371)
T cd04962 1 MKIGIVCYP-TYGGSGVVATELGKALARRGHEVHFITSSRPFRLDEYSPNIFFHEVEVPQYPLFQYPPYDLALASKIAEV 79 (371)
T ss_pred CceeEEEEe-CCCCccchHHHHHHHHHhcCCceEEEecCCCcchhhhccCeEEEEecccccchhhcchhHHHHHHHHHHH
Confidence 478888743 458999999999999999999999998743110 0 000112235566
Q ss_pred hhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEE
Q 001292 279 LGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358 (1106)
Q Consensus 279 Ir~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VI 358 (1106)
++..++|+||++.+....+..+..+... ...++|+|+++|+......... ..+.......++.+|.++
T Consensus 80 i~~~~~divh~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~h~~~~~~~~~~------~~~~~~~~~~~~~~d~ii 147 (371)
T cd04962 80 AKRYKLDLLHVHYAVPHAVAAYLAREIL------GKKDLPVVTTLHGTDITLVGQD------PSFQPATRFSIEKSDGVT 147 (371)
T ss_pred HhcCCccEEeecccCCccHHHHHHHHhc------CcCCCcEEEEEcCCcccccccc------ccchHHHHHHHhhCCEEE
Confidence 7778999999986554333323222211 0137999999998532210000 000111224567899999
Q ss_pred ecCCChhhhh--cCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHH
Q 001292 359 FPDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHD 436 (1106)
Q Consensus 359 a~S~~~~~~~--~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA 436 (1106)
+.+....... ......++.+||| |+|. ..|.+.. ....+.++++.++.++++++|++.+ .|+++.+++|
T Consensus 148 ~~s~~~~~~~~~~~~~~~~i~vi~n-~~~~---~~~~~~~-~~~~~~~~~~~~~~~~il~~g~l~~----~K~~~~li~a 218 (371)
T cd04962 148 AVSESLRQETYELFDITKEIEVIPN-FVDE---DRFRPKP-DEALKRRLGAPEGEKVLIHISNFRP----VKRIDDVIRI 218 (371)
T ss_pred EcCHHHHHHHHHhcCCcCCEEEecC-CcCH---hhcCCCc-hHHHHHhcCCCCCCeEEEEeccccc----ccCHHHHHHH
Confidence 9987665541 2224568999998 6886 4454432 3445677888888999999999887 8999999999
Q ss_pred HHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCc
Q 001292 437 VGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFP 516 (1106)
Q Consensus 437 ~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFG 516 (1106)
+..+.++ ++++ ++++|.+++. +.++++++++++.+ +|.|.|+.+++..+|+.||++++||..| +||
T Consensus 219 ~~~l~~~--------~~~~-l~i~G~g~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~d~~v~ps~~E--~~~ 284 (371)
T cd04962 219 FAKVRKE--------VPAR-LLLVGDGPER--SPAERLARELGLQD-DVLFLGKQDHVEELLSIADLFLLPSEKE--SFG 284 (371)
T ss_pred HHHHHhc--------CCce-EEEEcCCcCH--HHHHHHHHHcCCCc-eEEEecCcccHHHHHHhcCEEEeCCCcC--CCc
Confidence 9776531 3466 6889999865 88999999999987 8999999999999999999999999876 999
Q ss_pred HHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH-HHHH
Q 001292 517 SLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA-LDCV 595 (1106)
Q Consensus 517 lvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fs-ee~v 595 (1106)
++++|||++|+|||+++.++..|++.++.+|++++++|+++++++|..+++|++. +.+|++++++.+.+.|+ +..+
T Consensus 285 ~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~---~~~~~~~~~~~~~~~fs~~~~~ 361 (371)
T cd04962 285 LAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDEL---WQEFSRAARNRAAERFDSERIV 361 (371)
T ss_pred cHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999987 68899999999665555 5666
Q ss_pred HHHHHHHHHH
Q 001292 596 TRYARILENV 605 (1106)
Q Consensus 596 ~~Y~eLyesl 605 (1106)
.+|.++|+++
T Consensus 362 ~~~~~~y~~~ 371 (371)
T cd04962 362 PQYEALYRRL 371 (371)
T ss_pred HHHHHHHHhC
Confidence 6999999863
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=306.35 Aligned_cols=339 Identities=18% Similarity=0.185 Sum_probs=255.5
Q ss_pred CChhHHHHHHHHHHHHHCCCEEEEEEcCCCC----ch----------------------HHHHH----HhHHH-HHhhc-
Q 001292 234 KDSRSLLLITVVKNLQKLGYVFKIYAVRSGN----SH----------------------SLWEQ----IAGQI-SILGQ- 281 (1106)
Q Consensus 234 ~gGesl~vv~LakaLqe~GyeVtV~t~~dg~----~~----------------------~i~r~----lg~lv-kiIr~- 281 (1106)
.||.+.++..|+++|.++||+|+|+|...+. .. ..... ..... .+++.
T Consensus 19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (405)
T TIGR03449 19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVAPGVRVRNVVAGPYEGLDKEDLPTQLCAFTGGVLRAEARHE 98 (405)
T ss_pred CCCceehHHHHHHHHhhCCCEEEEEecccCCCCCCccccCCCcEEEEecCCCcccCCHHHHHHHHHHHHHHHHHHHhhcc
Confidence 5899999999999999999999999863210 00 00000 00011 22332
Q ss_pred -cCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcc-cccc-h-h-hhhhhHHhHHHHHHHHhccccE
Q 001292 282 -EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSL-ANRL-P-V-YVERGFQNLLSYWKSVFSRVNV 356 (1106)
Q Consensus 282 -~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~L-s~r~-~-~-Y~~~gleklis~~~~~l~~AD~ 356 (1106)
.++|+||+|.+...++..+..+. .++|+|+++|+... .... . . .+.....++. ....++.+|.
T Consensus 99 ~~~~Diih~h~~~~~~~~~~~~~~----------~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~--e~~~~~~~d~ 166 (405)
T TIGR03449 99 PGYYDLIHSHYWLSGQVGWLLRDR----------WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIG--EQQLVDNADR 166 (405)
T ss_pred CCCCCeEEechHHHHHHHHHHHHh----------cCCCEEEeccchHHHHHHhccCCCCCchHHHHHH--HHHHHHhcCe
Confidence 47999999987666655554432 57899999998421 1100 0 0 0000001111 1245789999
Q ss_pred EEecCCChhhh---hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHH
Q 001292 357 IVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVA 433 (1106)
Q Consensus 357 VIa~S~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlL 433 (1106)
+++.+...... ..+.+.+++.+||| |+|. +.|.+. .....+.++++++++++|+++|++.+ .||++.+
T Consensus 167 vi~~s~~~~~~~~~~~~~~~~ki~vi~n-gvd~---~~~~~~-~~~~~~~~~~~~~~~~~i~~~G~l~~----~K~~~~l 237 (405)
T TIGR03449 167 LIANTDEEARDLVRHYDADPDRIDVVAP-GADL---ERFRPG-DRATERARLGLPLDTKVVAFVGRIQP----LKAPDVL 237 (405)
T ss_pred EEECCHHHHHHHHHHcCCChhhEEEECC-CcCH---HHcCCC-cHHHHHHhcCCCCCCcEEEEecCCCc----ccCHHHH
Confidence 99998654433 34566778999998 8997 556544 24456788898888899999999988 8999999
Q ss_pred HHHHHHhHHHHHhhccCCCC--eEEEEEEcCCC--C-ccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEE
Q 001292 434 MHDVGPLLIKYARRNSVEGS--FKFVFLCGNST--D-GYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLY 506 (1106)
Q Consensus 434 LeA~k~Ll~k~aklk~~~Pd--ikfLIIVG~Gp--e-rY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~ 506 (1106)
++|+..+.++. |+ ++ |+++|... . .+.+.++++++++++.+ +|.|+|.. +++..+|+.||++++
T Consensus 238 i~a~~~l~~~~-------~~~~~~-l~ivG~~~~~g~~~~~~l~~~~~~~~l~~-~v~~~g~~~~~~~~~~l~~ad~~v~ 308 (405)
T TIGR03449 238 LRAVAELLDRD-------PDRNLR-VIVVGGPSGSGLATPDALIELAAELGIAD-RVRFLPPRPPEELVHVYRAADVVAV 308 (405)
T ss_pred HHHHHHHHhhC-------CCcceE-EEEEeCCCCCcchHHHHHHHHHHHcCCCc-eEEECCCCCHHHHHHHHHhCCEEEE
Confidence 99998886432 44 77 46666421 1 23588999999999987 99999954 789999999999999
Q ss_pred ccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH
Q 001292 507 GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHA 586 (1106)
Q Consensus 507 PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~a 586 (1106)
||..| +||++++||||+|+|||+++.+++.|++.++.+|++++++|+++++++|.+++++++. +.+|++++++.+
T Consensus 309 ps~~E--~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~---~~~~~~~~~~~~ 383 (405)
T TIGR03449 309 PSYNE--SFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRT---RIRMGAAAVEHA 383 (405)
T ss_pred CCCCC--CcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHH
Confidence 99876 9999999999999999999999999999999999999999999999999999999886 688999999999
Q ss_pred HHhcHHHHHHHHHHHHHHHhc
Q 001292 587 KNMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 587 ke~fsee~v~~Y~eLyeslLk 607 (1106)
+++.|+..+.+|.++|.+++.
T Consensus 384 ~~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 384 AGFSWAATADGLLSSYRDALA 404 (405)
T ss_pred HhCCHHHHHHHHHHHHHHHhh
Confidence 887888888899999998763
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-31 Score=306.63 Aligned_cols=337 Identities=15% Similarity=0.158 Sum_probs=253.2
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCC---ch---H---H---------------HHHH------
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN---SH---S---L---------------WEQI------ 272 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~---~~---~---i---------------~r~l------ 272 (1106)
+||+++++.+..-.+ .++..-+.+|.++|++|.++++.+.. .. . . ....
T Consensus 1 m~ia~~~~~~P~~se-tFi~~ei~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (406)
T PRK15427 1 MKVGFFLLKFPLSSE-TFVLNQITAFIDMGFEVEIVALQKGDTQNTHAAWTKYNLAAKTRWLQDEPQGKVAKLRHRASQT 79 (406)
T ss_pred CeEEEEeccCCccch-hhHHHHHHHHHHcCceEEEEEccCCCccccccchhhhccccceeecCcCccchHHHHhhhhhhH
Confidence 489999999886554 46678889999999999999974321 00 0 0 0000
Q ss_pred ------------------h----------HHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEc
Q 001292 273 ------------------A----------GQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQ 324 (1106)
Q Consensus 273 ------------------g----------~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIH 324 (1106)
+ .+...++..++|+||.|............... ..+.|+++++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diihaH~~~~~~~~~~~~~~~--------~~~~~~~~t~H 151 (406)
T PRK15427 80 LRGIHRKNTWKALNLKRYGAESRNLILSAICAQVATPFVADVFIAHFGPAGVTAAKLRELG--------VLRGKIATIFH 151 (406)
T ss_pred hhhhcccchhccCChhhhhhhhHHHHHHHHHhhhhccCCCCEEEEcCChHHHHHHHHHHhC--------CCCCCeEEEEc
Confidence 0 01223345679999999876554444333211 13456788999
Q ss_pred CCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHH
Q 001292 325 EDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLR 402 (1106)
Q Consensus 325 na~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR 402 (1106)
+......... ......+...++++|.+++.|...... ..+.+++++.+||| |+|. +.|.+....
T Consensus 152 g~d~~~~~~~------~~~~~~~~~~~~~ad~vv~~S~~~~~~l~~~g~~~~ki~vi~n-Gvd~---~~f~~~~~~---- 217 (406)
T PRK15427 152 GIDISSREVL------NHYTPEYQQLFRRGDLMLPISDLWAGRLQKMGCPPEKIAVSRM-GVDM---TRFSPRPVK---- 217 (406)
T ss_pred ccccccchhh------hhhhHHHHHHHHhCCEEEECCHHHHHHHHHcCCCHHHEEEcCC-CCCH---HHcCCCccc----
Confidence 8643321111 111112445678999999998755444 34677789999998 8998 556442110
Q ss_pred HHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCC
Q 001292 403 KENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLE 482 (1106)
Q Consensus 403 ~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d 482 (1106)
...+.+.|+++||+.+ .||++.+++|++.|.+ .+++++ ++|+|+|+.. ++++++++++|+.+
T Consensus 218 ----~~~~~~~il~vGrl~~----~Kg~~~ll~a~~~l~~-------~~~~~~-l~ivG~G~~~--~~l~~~~~~~~l~~ 279 (406)
T PRK15427 218 ----APATPLEIISVARLTE----KKGLHVAIEACRQLKE-------QGVAFR-YRILGIGPWE--RRLRTLIEQYQLED 279 (406)
T ss_pred ----cCCCCeEEEEEeCcch----hcCHHHHHHHHHHHHh-------hCCCEE-EEEEECchhH--HHHHHHHHHcCCCC
Confidence 1235678999999988 8999999999987753 237888 6889999965 89999999999987
Q ss_pred CcEEEcCCh--hhHHHHHHHcCeEEEccCCC----CCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHH
Q 001292 483 HSVRHYGFN--GDVNGVLLMADIVLYGSSQV----EQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPE 556 (1106)
Q Consensus 483 ~rV~flG~~--eDL~~LyaaADVfV~PS~~E----eEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~e 556 (1106)
+|.|+|.. +++.++|+.||++|+||..+ -||||++++||||||+|||+++.+|++|++.++.+|++++++|++
T Consensus 280 -~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~ 358 (406)
T PRK15427 280 -VVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDAQ 358 (406)
T ss_pred -eEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCCCHH
Confidence 99999954 78999999999999999741 149999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CcccHHHHHHHHHHHHHHHHHhcHHHH-HHHHHHHHHH
Q 001292 557 GLSRAFSLFIS-NGKLSKFARTVASAGRLHAKNMLALDC-VTRYARILEN 604 (1106)
Q Consensus 557 eLAeAI~~LLs-DpelRk~r~~mGe~Are~ake~fsee~-v~~Y~eLyes 604 (1106)
+|+++|.++++ |+++ +.+|+++|++.+.+.|+.+. +.++.++|++
T Consensus 359 ~la~ai~~l~~~d~~~---~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 359 ALAQRLAAFSQLDTDE---LAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHHHHHhCCHHH---HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 99999999999 9987 68999999999988776554 4599999875
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-30 Score=299.11 Aligned_cols=335 Identities=17% Similarity=0.180 Sum_probs=249.4
Q ss_pred EEEEEeCCCCC--ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCc---h-----------------------HHHHHHhHH
Q 001292 224 RIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNS---H-----------------------SLWEQIAGQ 275 (1106)
Q Consensus 224 RIalVlg~L~~--gGesl~vv~LakaLqe~GyeVtV~t~~dg~~---~-----------------------~i~r~lg~l 275 (1106)
||++|.+...+ ||.+..+..+++.|.++||+|+|++...+.. . .....+..+
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~v~~~p~~~~~~~~~~~~~~~~~~~l 80 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGIRYLTNGLKVYYLPFVVFYNQSTLPTFFGTFPLL 80 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCcccccCceeEEEecceeccCCccccchhhhHHHH
Confidence 57888776654 8999999999999999999999998742210 0 001111224
Q ss_pred HHHhhccCccEEEEccccHHHH--HHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhcc
Q 001292 276 ISILGQEQYSLIDWSIFDGIIA--DSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSR 353 (1106)
Q Consensus 276 vkiIr~~~pDiIh~~~~~~i~v--~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~ 353 (1106)
.+.+...++|+||+|.....+. ..+..+ ..++|+|++.|+............ .+ .....++.
T Consensus 81 ~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~----------~~~~~~v~t~h~~~~~~~~~~~~~---~~---~~~~~~~~ 144 (398)
T cd03796 81 RNILIRERITIVHGHQAFSALAHEALLHAR----------TMGLKTVFTDHSLFGFADASSIHT---NK---LLRFSLAD 144 (398)
T ss_pred HHHHHhcCCCEEEECCCCchHHHHHHHHhh----------hcCCcEEEEecccccccchhhHHh---hH---HHHHhhcc
Confidence 4566678999999998654432 222222 257899999998421100000000 11 11234678
Q ss_pred ccEEEecCCChhhh---hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCH
Q 001292 354 VNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDY 430 (1106)
Q Consensus 354 AD~VIa~S~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~ 430 (1106)
+|.+++.+....+. ..+++.+++.+||| |+|. +.|.+.... ..++.++++++||+.+ .||+
T Consensus 145 ~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~n-gvd~---~~f~~~~~~--------~~~~~~~i~~~grl~~----~Kg~ 208 (398)
T cd03796 145 VDHVICVSHTSKENTVLRASLDPERVSVIPN-AVDS---SDFTPDPSK--------RDNDKITIVVISRLVY----RKGI 208 (398)
T ss_pred CCEEEEecHhHhhHHHHHhCCChhhEEEEcC-ccCH---HHcCCCccc--------CCCCceEEEEEeccch----hcCH
Confidence 99999998765432 44667788999998 7997 556543211 2357789999999988 8999
Q ss_pred HHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCC--hhhHHHHHHHcCeEEEcc
Q 001292 431 AVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF--NGDVNGVLLMADIVLYGS 508 (1106)
Q Consensus 431 dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~--~eDL~~LyaaADVfV~PS 508 (1106)
+.+++|+..+.++ .|+++ |+++|+++.. +.++++++++++.+ +|.|+|. .+++..+|+.||++++||
T Consensus 209 ~~li~a~~~l~~~-------~~~~~-l~i~G~g~~~--~~l~~~~~~~~l~~-~v~~~G~~~~~~~~~~l~~ad~~v~pS 277 (398)
T cd03796 209 DLLVGIIPEICKK-------HPNVR-FIIGGDGPKR--ILLEEMREKYNLQD-RVELLGAVPHERVRDVLVQGHIFLNTS 277 (398)
T ss_pred HHHHHHHHHHHhh-------CCCEE-EEEEeCCchH--HHHHHHHHHhCCCC-eEEEeCCCCHHHHHHHHHhCCEEEeCC
Confidence 9999999877542 37888 6889999865 88999999999997 9999995 478999999999999999
Q ss_pred CCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH
Q 001292 509 SQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKN 588 (1106)
Q Consensus 509 ~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake 588 (1106)
..| +||++++||||||+|||+++.++++|++.++ .+++++ .|+++|+++|.++++++.. ...++.++++.+.+
T Consensus 278 ~~E--~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~-~~~~~~-~~~~~l~~~l~~~l~~~~~---~~~~~~~~~~~~~~ 350 (398)
T cd03796 278 LTE--AFCIAIVEAASCGLLVVSTRVGGIPEVLPPD-MILLAE-PDVESIVRKLEEAISILRT---GKHDPWSFHNRVKK 350 (398)
T ss_pred hhh--ccCHHHHHHHHcCCCEEECCCCCchhheeCC-ceeecC-CCHHHHHHHHHHHHhChhh---hhhHHHHHHHHHHh
Confidence 876 9999999999999999999999999999775 344444 5899999999999998765 34567788887766
Q ss_pred hcH-HHHHHHHHHHHHHHhcC
Q 001292 589 MLA-LDCVTRYARILENVLNF 608 (1106)
Q Consensus 589 ~fs-ee~v~~Y~eLyeslLk~ 608 (1106)
.|+ +..+.+|.++|++++..
T Consensus 351 ~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 351 MYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred hCCHHHHHHHHHHHHHHHhcC
Confidence 665 55566999999998874
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-30 Score=281.13 Aligned_cols=339 Identities=19% Similarity=0.296 Sum_probs=263.6
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCC-chHHH-------------------HHHhHHHHHhhccC
Q 001292 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN-SHSLW-------------------EQIAGQISILGQEQ 283 (1106)
Q Consensus 224 RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~-~~~i~-------------------r~lg~lvkiIr~~~ 283 (1106)
||+++++.+..||.+..+..+++.|.+.|++|.+++..... ..... .....+.+.++..+
T Consensus 1 ~i~~i~~~~~~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T cd03807 1 KVLHVITGLDVGGAERMLVRLLKGLDRDRFEHVVISLTDRGELGEELEEAGVPVYCLGKRPGRPDPGALLRLYKLIRRLR 80 (365)
T ss_pred CeEEEEeeccCccHHHHHHHHHHHhhhccceEEEEecCcchhhhHHHHhcCCeEEEEecccccccHHHHHHHHHHHHhhC
Confidence 68999999999999999999999999999999999875322 11111 11122456677789
Q ss_pred ccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHH-HHHhccccEEEecCC
Q 001292 284 YSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYW-KSVFSRVNVIVFPDY 362 (1106)
Q Consensus 284 pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~-~~~l~~AD~VIa~S~ 362 (1106)
+|+||.+.+...++..+..+.. .++|+|+++|+........ . ....... ......++.+++.+.
T Consensus 81 ~div~~~~~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~i~~s~ 145 (365)
T cd03807 81 PDVVHTWMYHADLYGGLAARLA---------GVPPVIWGIRHSDLDLGKK---S---TRLVARLRRLLSSFIPLIVANSA 145 (365)
T ss_pred CCEEEeccccccHHHHHHHHhc---------CCCcEEEEecCCcccccch---h---HhHHHHHHHHhccccCeEEeccH
Confidence 9999998776666555555321 5789999999964332100 0 1111111 234567788788876
Q ss_pred Chhhh--hcCCCCCCEEEeCCCCCCcccccccCcc-hhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHH
Q 001292 363 TLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKS-HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGP 439 (1106)
Q Consensus 363 ~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps-~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~ 439 (1106)
..... ..+++..++.++|| |+|. ..+.+. ......+++++++++.++++++|++.. .|+.+.+++|+..
T Consensus 146 ~~~~~~~~~~~~~~~~~vi~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~----~K~~~~li~a~~~ 217 (365)
T cd03807 146 AAAEYHQAIGYPPKKIVVIPN-GVDT---ERFSPDLDARARLREELGLPEDTFLIGIVARLHP----QKDHATLLRAAAL 217 (365)
T ss_pred HHHHHHHHcCCChhheeEeCC-CcCH---HhcCCcccchHHHHHhcCCCCCCeEEEEecccch----hcCHHHHHHHHHH
Confidence 65554 33677788999998 7987 445443 234456678899889999999999887 8899999999988
Q ss_pred hHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHH-HcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHH
Q 001292 440 LLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVAS-RLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSL 518 (1106)
Q Consensus 440 Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLae-klGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlv 518 (1106)
+.++ .++++ ++++|.++.. ..++.... ++++.+ +|.+.|..+++..+|+.||++++||..| ++|++
T Consensus 218 l~~~-------~~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adi~v~ps~~e--~~~~~ 284 (365)
T cd03807 218 LLKK-------FPNAR-LLLVGDGPDR--ANLELLALKELGLED-KVILLGERSDVPALLNALDVFVLSSLSE--GFPNV 284 (365)
T ss_pred HHHh-------CCCeE-EEEecCCcch--hHHHHHHHHhcCCCc-eEEEccccccHHHHHHhCCEEEeCCccc--cCCcH
Confidence 7643 37888 6889998875 66777776 888887 9999999999999999999999999986 99999
Q ss_pred HHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH-HHHHHH
Q 001292 519 IVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA-LDCVTR 597 (1106)
Q Consensus 519 LLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fs-ee~v~~ 597 (1106)
++|||+||+|||+++.++..+++.+ +|++++++|+++++++|..++++++. +.++++++++.+.++|+ +..+.+
T Consensus 285 ~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~s~~~~~~~ 359 (365)
T cd03807 285 LLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLADPAL---RQALGEAARERIEENFSIEAMVEA 359 (365)
T ss_pred HHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChHH---HHHHHHHHHHHHHHhCCHHHHHHH
Confidence 9999999999999999999999976 89999999999999999999999876 68899999999988766 555569
Q ss_pred HHHHHH
Q 001292 598 YARILE 603 (1106)
Q Consensus 598 Y~eLye 603 (1106)
|.++|+
T Consensus 360 ~~~~y~ 365 (365)
T cd03807 360 YEELYR 365 (365)
T ss_pred HHHHhC
Confidence 998874
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-30 Score=303.23 Aligned_cols=341 Identities=13% Similarity=0.118 Sum_probs=244.0
Q ss_pred CCCChhHHHHHHHHHHHHHCCC--EEEEEEcCC-C-----Cc----h----------------------HHHHH----Hh
Q 001292 232 MAKDSRSLLLITVVKNLQKLGY--VFKIYAVRS-G-----NS----H----------------------SLWEQ----IA 273 (1106)
Q Consensus 232 L~~gGesl~vv~LakaLqe~Gy--eVtV~t~~d-g-----~~----~----------------------~i~r~----lg 273 (1106)
-..||.+..+.+|+++|.++|+ +|+|+|... + .. . ..+.. ..
T Consensus 23 p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~~~~~~~~~~~~~~~~~~~~~ 102 (439)
T TIGR02472 23 ADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPFGPRRYLRKELLWPYLDELAD 102 (439)
T ss_pred CCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecCCCCCCcChhhhhhhHHHHHH
Confidence 3458999999999999999997 999998421 0 00 0 00000 01
Q ss_pred HHHHHhhcc--CccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccc--hh-----hhhh---hHH
Q 001292 274 GQISILGQE--QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRL--PV-----YVER---GFQ 341 (1106)
Q Consensus 274 ~lvkiIr~~--~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~--~~-----Y~~~---gle 341 (1106)
.+.++++.. +||+||+|.+...++..+..+. .++|+|+|.|+.....+. .. .... ...
T Consensus 103 ~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~----------~~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (439)
T TIGR02472 103 NLLQHLRQQGHLPDLIHAHYADAGYVGARLSRL----------LGVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNIS 172 (439)
T ss_pred HHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHH----------hCCCEEEecccccchhhhhcccCCCChhhhhhhcchH
Confidence 234455533 6999999987766666655542 578999999974221110 00 0000 000
Q ss_pred hHHHHHHHHhccccEEEecCCChhhh----hcCCCCCCEEEeCCCCCCcccccccCcch---hHHH---HHHHcCCCCCc
Q 001292 342 NLLSYWKSVFSRVNVIVFPDYTLPML----YSVLDAGNFFVIPGSPADVWAVEAYSKSH---EKYQ---LRKENGFLKDE 411 (1106)
Q Consensus 342 klis~~~~~l~~AD~VIa~S~~~~~~----~~gi~~~KI~VIpN~GVDl~~~e~F~ps~---s~~~---LR~~lGL~~d~ 411 (1106)
..+......++.+|.|++.+...... +.+++++++.+||| |+|+ +.|.+.. .... .+..++..++.
T Consensus 173 ~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpn-Gvd~---~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (439)
T TIGR02472 173 RRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPP-GVDL---SRFYPPQSSEETSEIDNLLAPFLKDPEK 248 (439)
T ss_pred HHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECC-CcCh---hhcCCCCccccchhHHHHHHhhccccCC
Confidence 11111234578999999987543221 23677889999998 8998 6665532 1111 22345566678
Q ss_pred EEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCc---------cHHHHHHHHHHcCCCC
Q 001292 412 IVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG---------YNDALQEVASRLGLLE 482 (1106)
Q Consensus 412 ~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gper---------Y~eeLkeLaeklGL~d 482 (1106)
++|+++||+.+ .||++.+++|++.+.. . ...+++ ++++|++++. +.+.+.++++++++.+
T Consensus 249 ~~i~~vGrl~~----~Kg~~~li~A~~~l~~-~----~~~~~l--~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~ 317 (439)
T TIGR02472 249 PPILAISRPDR----RKNIPSLVEAYGRSPK-L----QEMANL--VLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYG 317 (439)
T ss_pred cEEEEEcCCcc----cCCHHHHHHHHHhChh-h----hhhccE--EEEeCCccccccccHHHHHHHHHHHHHHHHcCCCc
Confidence 89999999988 8999999999976531 1 111333 4567887642 1234566788899997
Q ss_pred CcEEEcCC--hhhHHHHHHHc----CeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHH
Q 001292 483 HSVRHYGF--NGDVNGVLLMA----DIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPE 556 (1106)
Q Consensus 483 ~rV~flG~--~eDL~~LyaaA----DVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~e 556 (1106)
+|.|+|. .+++..+|+.| |++|+||..| +||++++||||||+|||+++.+|++|++.++.+|++++++|++
T Consensus 318 -~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E--~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~ 394 (439)
T TIGR02472 318 -KVAYPKHHRPDDVPELYRLAARSRGIFVNPALTE--PFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLE 394 (439)
T ss_pred -eEEecCCCCHHHHHHHHHHHhhcCCEEecccccC--CcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHH
Confidence 9999994 57899999987 9999999986 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH-HHHHHHHHHHHH
Q 001292 557 GLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA-LDCVTRYARILE 603 (1106)
Q Consensus 557 eLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fs-ee~v~~Y~eLye 603 (1106)
+|+++|.++++|++. +++|++++++.+.+.|+ +.++.+|.++++
T Consensus 395 ~la~~i~~ll~~~~~---~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 395 AIASALEDALSDSSQ---WQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999987 68899999998876665 555669888763
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-30 Score=305.72 Aligned_cols=352 Identities=15% Similarity=0.151 Sum_probs=257.2
Q ss_pred CEEEEEeCCCCC----ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch--------------------------------
Q 001292 223 PRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-------------------------------- 266 (1106)
Q Consensus 223 ~RIalVlg~L~~----gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~-------------------------------- 266 (1106)
+||++|+.++.+ ||...++..|.++|+++|++|.|++...+...
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~v 80 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGDGVPVYLI 80 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEeeeEEEEEEeEEcCCceEEEE
Confidence 589999877544 89999999999999999999999987432110
Q ss_pred ---HH------H-------H--HHh-HHHHHhhc--cCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcC
Q 001292 267 ---SL------W-------E--QIA-GQISILGQ--EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQE 325 (1106)
Q Consensus 267 ---~i------~-------r--~lg-~lvkiIr~--~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHn 325 (1106)
.. + + .+. .....++. .+||+||+|.+.+.++..+.+... .....++|+|+|+|+
T Consensus 81 ~~~~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~-----~~~~~~~~~v~TiH~ 155 (466)
T PRK00654 81 DAPHLFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKY-----WRGYPDIKTVFTIHN 155 (466)
T ss_pred eCHHHcCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhh-----hccCCCCCEEEEcCC
Confidence 00 0 0 000 12233332 489999999999888777666321 011247899999999
Q ss_pred Ccccccchh------------hhhhhHHh--HHHHHHHHhccccEEEecCCChhhhhc------------CCCCCCEEEe
Q 001292 326 DSLANRLPV------------YVERGFQN--LLSYWKSVFSRVNVIVFPDYTLPMLYS------------VLDAGNFFVI 379 (1106)
Q Consensus 326 a~Ls~r~~~------------Y~~~glek--lis~~~~~l~~AD~VIa~S~~~~~~~~------------gi~~~KI~VI 379 (1106)
......... .....++. .....+..+..+|.|+++|........ ..+..++.+|
T Consensus 156 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI 235 (466)
T PRK00654 156 LAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGI 235 (466)
T ss_pred CcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEe
Confidence 543221110 00000000 011223457899999999876544311 2346789999
Q ss_pred CCCCCCcccccccCcch------------------hHHHHHHHcCCCC-CcEEEEEEcccCccccccCCHHHHHHHHHHh
Q 001292 380 PGSPADVWAVEAYSKSH------------------EKYQLRKENGFLK-DEIVVVVVGSSFFYNELSWDYAVAMHDVGPL 440 (1106)
Q Consensus 380 pN~GVDl~~~e~F~ps~------------------s~~~LR~~lGL~~-d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~L 440 (1106)
+| |+|. +.|.|.. .+..+++++|+++ +.++|+++||+.+ +||++.+++|++.+
T Consensus 236 ~N-Gid~---~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~----~KG~~~li~a~~~l 307 (466)
T PRK00654 236 LN-GIDY---DIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTE----QKGLDLVLEALPEL 307 (466)
T ss_pred cC-CCCc---cccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeecccc----ccChHHHHHHHHHH
Confidence 98 8998 5555431 2456788999975 6789999999998 99999999999877
Q ss_pred HHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEE-EcCChhh-HHHHHHHcCeEEEccCCCCCCCcHH
Q 001292 441 LIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVR-HYGFNGD-VNGVLLMADIVLYGSSQVEQGFPSL 518 (1106)
Q Consensus 441 l~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~-flG~~eD-L~~LyaaADVfV~PS~~EeEGFGlv 518 (1106)
.+ .+++ |+|+|.|+..|.+.+++++++++. +|. +.|+.++ +..+|+.||++|+||.+| +||++
T Consensus 308 ~~---------~~~~-lvivG~g~~~~~~~l~~l~~~~~~---~v~~~~g~~~~~~~~~~~~aDv~v~PS~~E--~~gl~ 372 (466)
T PRK00654 308 LE---------QGGQ-LVLLGTGDPELEEAFRALAARYPG---KVGVQIGYDEALAHRIYAGADMFLMPSRFE--PCGLT 372 (466)
T ss_pred Hh---------cCCE-EEEEecCcHHHHHHHHHHHHHCCC---cEEEEEeCCHHHHHHHHhhCCEEEeCCCCC--CchHH
Confidence 53 2566 578898875556889999988763 454 5676644 568999999999999997 99999
Q ss_pred HHHHHHhCCCEEecCCCCchhhhccC------CeEEEEcCCCHHHHHHHHHHHHh---CcccHHHHHHHHHHHHHHHHHh
Q 001292 519 IVRAMTFGIPVITPDFPIIKEYVAEG------AQVIFFQKDNPEGLSRAFSLFIS---NGKLSKFARTVASAGRLHAKNM 589 (1106)
Q Consensus 519 LLEAMA~G~PVIASD~gGI~EiV~Dg------~nG~LV~~~D~eeLAeAI~~LLs---DpelRk~r~~mGe~Are~ake~ 589 (1106)
++|||+||+|||++++||+.|+|.++ .+|+++++.|+++|+++|.++++ +++. ..+|+.++.+ .++
T Consensus 373 ~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~---~~~~~~~~~~--~~f 447 (466)
T PRK00654 373 QLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPL---WRALQRQAMA--QDF 447 (466)
T ss_pred HHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHH---HHHHHHHHhc--cCC
Confidence 99999999999999999999999887 89999999999999999999887 4544 5677777753 456
Q ss_pred cHHHHHHHHHHHHHHHhc
Q 001292 590 LALDCVTRYARILENVLN 607 (1106)
Q Consensus 590 fsee~v~~Y~eLyeslLk 607 (1106)
.|+.++++|.++|+++++
T Consensus 448 sw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 448 SWDKSAEEYLELYRRLLG 465 (466)
T ss_pred ChHHHHHHHHHHHHHHhh
Confidence 677788899999998764
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-30 Score=291.09 Aligned_cols=346 Identities=14% Similarity=0.162 Sum_probs=251.9
Q ss_pred CEEEEEeCCCCC---ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCc-------------------hHHHHHHhH-HHHHh
Q 001292 223 PRIGLILGNMAK---DSRSLLLITVVKNLQKLGYVFKIYAVRSGNS-------------------HSLWEQIAG-QISIL 279 (1106)
Q Consensus 223 ~RIalVlg~L~~---gGesl~vv~LakaLqe~GyeVtV~t~~dg~~-------------------~~i~r~lg~-lvkiI 279 (1106)
+||++|.+.+.+ ||.+..+..+++.|.+. ++|+|++...+.. ......+.. +....
T Consensus 1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (388)
T TIGR02149 1 MKVTVLTREYPPNVYGGAGVHVEELTRELARL-MDVDVRCFGDQRFDSEGLTVKGYRPWSELKEANKALGTFSVDLAMAN 79 (388)
T ss_pred CeeEEEecccCccccccHhHHHHHHHHHHHHh-cCeeEEcCCCchhcCCCeEEEEecChhhccchhhhhhhhhHHHHHhh
Confidence 589999988865 78899999999999987 6666666543210 000001110 11112
Q ss_pred hccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccc-cchhhhhh--hHHhHHHHHHHHhccccE
Q 001292 280 GQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLAN-RLPVYVER--GFQNLLSYWKSVFSRVNV 356 (1106)
Q Consensus 280 r~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~-r~~~Y~~~--gleklis~~~~~l~~AD~ 356 (1106)
...++|++|.|.+...+...+..+. .++|+|+++|+..... +....... ....+. ....++.+|.
T Consensus 80 ~~~~~divh~~~~~~~~~~~~~~~~----------~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ad~ 147 (388)
T TIGR02149 80 DPVDADVVHSHTWYTFLAGHLAKKL----------YDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWA--EKTAIEAADR 147 (388)
T ss_pred CCCCCCeEeecchhhhhHHHHHHHh----------cCCCEEEEeecccccccccccccccchhHHHHH--HHHHHhhCCE
Confidence 2246899999987776655554432 5899999999853211 10000000 001111 1345789999
Q ss_pred EEecCCChhhh----hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHH
Q 001292 357 IVFPDYTLPML----YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAV 432 (1106)
Q Consensus 357 VIa~S~~~~~~----~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dl 432 (1106)
++++|...... +.+++..++.+||| |+|. +.+.+. ....++.+++++++.++|+++||+.+ .||++.
T Consensus 148 vi~~S~~~~~~~~~~~~~~~~~~i~vi~n-g~~~---~~~~~~-~~~~~~~~~~~~~~~~~i~~~Grl~~----~Kg~~~ 218 (388)
T TIGR02149 148 VIAVSGGMREDILKYYPDLDPEKVHVIYN-GIDT---KEYKPD-DGNVVLDRYGIDRSRPYILFVGRITR----QKGVPH 218 (388)
T ss_pred EEEccHHHHHHHHHHcCCCCcceEEEecC-CCCh---hhcCCC-chHHHHHHhCCCCCceEEEEEccccc----ccCHHH
Confidence 99999765543 22556778999998 7987 555543 34567888999888999999999887 899999
Q ss_pred HHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCc--cHHHHHHHHHHcCCCCCcEEEcC---ChhhHHHHHHHcCeEEEc
Q 001292 433 AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG--YNDALQEVASRLGLLEHSVRHYG---FNGDVNGVLLMADIVLYG 507 (1106)
Q Consensus 433 LLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gper--Y~eeLkeLaeklGL~d~rV~flG---~~eDL~~LyaaADVfV~P 507 (1106)
+++|++.+. ++++ ++++|.++.. +.+.+++.+..++....+|.+.+ +.+++..+|+.||++|+|
T Consensus 219 li~a~~~l~----------~~~~-l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~p 287 (388)
T TIGR02149 219 LLDAVHYIP----------KDVQ-VVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCP 287 (388)
T ss_pred HHHHHHHHh----------hcCc-EEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeC
Confidence 999997764 3455 4566655432 34667777777766433577654 357899999999999999
Q ss_pred cCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCH------HHHHHHHHHHHhCcccHHHHHHHHHH
Q 001292 508 SSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNP------EGLSRAFSLFISNGKLSKFARTVASA 581 (1106)
Q Consensus 508 S~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~------eeLAeAI~~LLsDpelRk~r~~mGe~ 581 (1106)
|..| +||++++||||||+|||+++.+++.|++.++.+|++++++|+ ++|+++|.++++|++. +.+|+.+
T Consensus 288 s~~e--~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~---~~~~~~~ 362 (388)
T TIGR02149 288 SIYE--PLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPEL---AKKMGIA 362 (388)
T ss_pred CccC--CCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHH---HHHHHHH
Confidence 9987 999999999999999999999999999999999999999998 9999999999999987 6889999
Q ss_pred HHHHHHHhc-HHHHHHHHHHHHHHHh
Q 001292 582 GRLHAKNML-ALDCVTRYARILENVL 606 (1106)
Q Consensus 582 Are~ake~f-see~v~~Y~eLyeslL 606 (1106)
+++.+.+.| |+.++++|.++|++++
T Consensus 363 a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 363 GRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 999886655 5566669999999763
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-30 Score=283.81 Aligned_cols=335 Identities=17% Similarity=0.243 Sum_probs=255.2
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch-------------------HHHHHHhHHHHHhhccCc
Q 001292 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-------------------SLWEQIAGQISILGQEQY 284 (1106)
Q Consensus 224 RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~-------------------~i~r~lg~lvkiIr~~~p 284 (1106)
+|+++++.+..||.+..+..+++.|.++|++|++++..++... ..+..+..+.++++..++
T Consensus 1 ~il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 80 (360)
T cd04951 1 KILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPIDATIILNLNMSKNPLSFLLALWKLRKILRQFKP 80 (360)
T ss_pred CeEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchhhccceEEecccccchhhHHHHHHHHHHHHhcCC
Confidence 4889999999999999999999999999999999987443211 011111224566777899
Q ss_pred cEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCCh
Q 001292 285 SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTL 364 (1106)
Q Consensus 285 DiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~ 364 (1106)
|+||.+.+...++..+..+. ..++|+|.+.|+.....+. ..+...+ ....++.+++.+...
T Consensus 81 div~~~~~~~~~~~~l~~~~---------~~~~~~v~~~h~~~~~~~~--------~~~~~~~--~~~~~~~~~~~s~~~ 141 (360)
T cd04951 81 DVVHAHMFHANIFARLLRLF---------LPSPPLICTAHSKNEGGRL--------RMLAYRL--TDFLSDLTTNVSKEA 141 (360)
T ss_pred CEEEEcccchHHHHHHHHhh---------CCCCcEEEEeeccCchhHH--------HHHHHHH--HhhccCceEEEcHHH
Confidence 99999988776666655532 2578999999985321111 1111111 222355566555444
Q ss_pred hhh---hcCCCCCCEEEeCCCCCCcccccccCcc-hhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHh
Q 001292 365 PML---YSVLDAGNFFVIPGSPADVWAVEAYSKS-HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPL 440 (1106)
Q Consensus 365 ~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~ps-~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~L 440 (1106)
... ...++..++.+||| |+|. ..|.+. .....+++++++.+++++++++|++.+ .||.+.+++++.++
T Consensus 142 ~~~~~~~~~~~~~~~~~i~n-g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~----~kg~~~li~a~~~l 213 (360)
T cd04951 142 LDYFIASKAFNANKSFVVYN-GIDT---DRFRKDPARRLKIRNALGVKNDTFVILAVGRLVE----AKDYPNLLKAFAKL 213 (360)
T ss_pred HHHHHhccCCCcccEEEEcc-ccch---hhcCcchHHHHHHHHHcCcCCCCEEEEEEeeCch----hcCcHHHHHHHHHH
Confidence 333 22356788999998 7987 455543 334567888999888999999999887 88999999999877
Q ss_pred HHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHH
Q 001292 441 LIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIV 520 (1106)
Q Consensus 441 l~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLL 520 (1106)
.++. |+++ ++|+|.|+.. +.+++.++++++.+ +|.++|+.+++..+|+.||++++||..| +||++++
T Consensus 214 ~~~~-------~~~~-l~i~G~g~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~~s~~e--~~~~~~~ 280 (360)
T cd04951 214 LSDY-------LDIK-LLIAGDGPLR--ATLERLIKALGLSN-RVKLLGLRDDIAAYYNAADLFVLSSAWE--GFGLVVA 280 (360)
T ss_pred HhhC-------CCeE-EEEEcCCCcH--HHHHHHHHhcCCCC-cEEEecccccHHHHHHhhceEEeccccc--CCChHHH
Confidence 6432 7888 6889999975 88999999999887 8999999999999999999999999986 9999999
Q ss_pred HHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH-HHHHHHHH
Q 001292 521 RAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA-LDCVTRYA 599 (1106)
Q Consensus 521 EAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fs-ee~v~~Y~ 599 (1106)
||||+|+|||+++.+++.|++.+ +|++++++|+++++++|.++++++... +..++.+ ++.+.+.|+ +..+.+|.
T Consensus 281 Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~--~~~~~~~-~~~~~~~~s~~~~~~~~~ 355 (360)
T cd04951 281 EAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILKMSGEE--RDIIGAR-RERIVKKFSINSIVQQWL 355 (360)
T ss_pred HHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHhCCHHH--HHHHHHH-HHHHHHhcCHHHHHHHHH
Confidence 99999999999999999999965 899999999999999999999554432 4566666 665555555 55666999
Q ss_pred HHHH
Q 001292 600 RILE 603 (1106)
Q Consensus 600 eLye 603 (1106)
++|+
T Consensus 356 ~~y~ 359 (360)
T cd04951 356 TLYT 359 (360)
T ss_pred HHhh
Confidence 9986
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-30 Score=313.83 Aligned_cols=346 Identities=14% Similarity=0.078 Sum_probs=253.7
Q ss_pred CCCCC-EEEEEeCCCCCChhHHHHHHHHHHHHHCCC--------------EEEEEEc--CCCC--chH------------
Q 001292 219 GVRPP-RIGLILGNMAKDSRSLLLITVVKNLQKLGY--------------VFKIYAV--RSGN--SHS------------ 267 (1106)
Q Consensus 219 g~r~~-RIalVlg~L~~gGesl~vv~LakaLqe~Gy--------------eVtV~t~--~dg~--~~~------------ 267 (1106)
+.++. ||++|++++..||.+..++.|+.+|.+.++ .|.++++ .++. ...
T Consensus 277 ~~~~~~rIl~vi~sl~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~L~~~Gv~v~~l 356 (694)
T PRK15179 277 PESFVGPVLMINGSLGAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAATLADAGIPVSVY 356 (694)
T ss_pred CCCCcceEEEEeCCCCCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchHHHHHHhCCCeEEEe
Confidence 56777 999999999999999999999999999955 3444422 1211 100
Q ss_pred ----------------------------HHHHHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcE
Q 001292 268 ----------------------------LWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPL 319 (1106)
Q Consensus 268 ----------------------------i~r~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPV 319 (1106)
.+.....+.++++..+||+||+|.....++..+..+. .++|+
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~~----------~gvPv 426 (694)
T PRK15179 357 SDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSIFACALAALL----------AGVPR 426 (694)
T ss_pred ccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHH----------cCCCE
Confidence 0111123566788889999999998888887777753 56888
Q ss_pred EE-EEcCCcccccchhhhhhhHHhHHHHHHHHhcccc--EEEecCCChhhh---hcCCCCCCEEEeCCCCCCcccccccC
Q 001292 320 VW-IIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVN--VIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYS 393 (1106)
Q Consensus 320 I~-tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD--~VIa~S~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~ 393 (1106)
|+ +.|+.........+ ..........+..++ .+++.+...... ..+++.+++.|||| |||. +.|.
T Consensus 427 Iv~t~h~~~~~~~~~~~-----~~~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~~~g~~~~kI~VI~N-GVd~---~~f~ 497 (694)
T PRK15179 427 IVLSVRTMPPVDRPDRY-----RVEYDIIYSELLKMRGVALSSNSQFAAHRYADWLGVDERRIPVVYN-GLAP---LKSV 497 (694)
T ss_pred EEEEeCCCccccchhHH-----HHHHHHHHHHHHhcCCeEEEeCcHHHHHHHHHHcCCChhHEEEECC-CcCH---HhcC
Confidence 76 55653211111010 000000111222333 444444333222 34678889999998 8997 5565
Q ss_pred cchhHHHHHHH--cCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHH
Q 001292 394 KSHEKYQLRKE--NGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDAL 471 (1106)
Q Consensus 394 ps~s~~~LR~~--lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeL 471 (1106)
+.......+.. ..++.+.++|+++||+.+ .||++.+++|+..+.++. |+++ |+|+|+|+.+ +.+
T Consensus 498 ~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~----~KG~~~LI~A~a~l~~~~-------p~~~-LvIvG~G~~~--~~L 563 (694)
T PRK15179 498 QDDACTAMMAQFDARTSDARFTVGTVMRVDD----NKRPFLWVEAAQRFAASH-------PKVR-FIMVGGGPLL--ESV 563 (694)
T ss_pred CCchhhHHHHhhccccCCCCeEEEEEEeCCc----cCCHHHHHHHHHHHHHHC-------cCeE-EEEEccCcch--HHH
Confidence 43222211222 234556789999999988 999999999998886433 7888 6899999865 999
Q ss_pred HHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEc
Q 001292 472 QEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQ 551 (1106)
Q Consensus 472 keLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~ 551 (1106)
+++++++|+.+ +|+|+|+.+++..+|+.||++|+||.+| +||++++||||||+|||+++.+|++|+|.++.+|++++
T Consensus 564 ~~l~~~lgL~~-~V~flG~~~dv~~ll~aaDv~VlpS~~E--gfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~ 640 (694)
T PRK15179 564 REFAQRLGMGE-RILFTGLSRRVGYWLTQFNAFLLLSRFE--GLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLP 640 (694)
T ss_pred HHHHHHcCCCC-cEEEcCCcchHHHHHHhcCEEEeccccc--cchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeC
Confidence 99999999998 9999999999999999999999999986 99999999999999999999999999999999999999
Q ss_pred CCC--HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH-HHHHHHHHHHHH
Q 001292 552 KDN--PEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA-LDCVTRYARILE 603 (1106)
Q Consensus 552 ~~D--~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fs-ee~v~~Y~eLye 603 (1106)
++| +++|+++|.+++.+... ...+++++++.+.+.|+ +.++.+|.++|+
T Consensus 641 ~~d~~~~~La~aL~~ll~~l~~---~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 641 ADTVTAPDVAEALARIHDMCAA---DPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred CCCCChHHHHHHHHHHHhChhc---cHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 877 46899999998887654 35678899999876665 556669999985
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.9e-30 Score=319.86 Aligned_cols=354 Identities=11% Similarity=0.087 Sum_probs=263.3
Q ss_pred CCCCEEEEEeCC-------------CCCChhHHHHHHHHHHHHHCC--CEEEEEEcCCCC--------------------
Q 001292 220 VRPPRIGLILGN-------------MAKDSRSLLLITVVKNLQKLG--YVFKIYAVRSGN-------------------- 264 (1106)
Q Consensus 220 ~r~~RIalVlg~-------------L~~gGesl~vv~LakaLqe~G--yeVtV~t~~dg~-------------------- 264 (1106)
-++..|+||+-+ -..||+.++++.|+++|.++| ++|.|+|-....
T Consensus 167 ~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~ 246 (1050)
T TIGR02468 167 EKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSE 246 (1050)
T ss_pred cCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccccccccc
Confidence 346678877422 233789999999999999998 899998862110
Q ss_pred ---------------------------chHHHHHHhH----HHHHhhc--------------cCccEEEEccccHHHHHH
Q 001292 265 ---------------------------SHSLWEQIAG----QISILGQ--------------EQYSLIDWSIFDGIIADS 299 (1106)
Q Consensus 265 ---------------------------~~~i~r~lg~----lvkiIr~--------------~~pDiIh~~~~~~i~v~~ 299 (1106)
...+|..+.. +..++.. ..||+||.|.+++..+..
T Consensus 247 ~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~aa~ 326 (1050)
T TIGR02468 247 NDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSAA 326 (1050)
T ss_pred cccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHHHH
Confidence 0112333222 2223221 148999999999999888
Q ss_pred HHHHHhhhhcccCCCCCCcEEEEEcCCccccc--c------h------hhhhhhHHhHHHHHHHHhccccEEEecCCChh
Q 001292 300 LEAKEAISSLMQEPFHSIPLVWIIQEDSLANR--L------P------VYVERGFQNLLSYWKSVFSRVNVIVFPDYTLP 365 (1106)
Q Consensus 300 La~k~~idII~te~~~gIPVI~tIHna~Ls~r--~------~------~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~ 365 (1106)
+.... .++|+|.|.|.....+. + . .|.. ...+..-..++..||.||+.+....
T Consensus 327 ~L~~~----------lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~---~~Ri~~Ee~~l~~Ad~VIasT~qE~ 393 (1050)
T TIGR02468 327 LLSGA----------LNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKI---MRRIEAEELSLDASEIVITSTRQEI 393 (1050)
T ss_pred HHHHh----------hCCCEEEECccchhhhhhhhcccccccccccccccch---HHHHHHHHHHHHhcCEEEEeCHHHH
Confidence 77753 68999999997321110 0 0 0110 1122222346889999999986655
Q ss_pred hh----hcCCC---------------------CCCEEEeCCCCCCcccccccCcchhH--------------------HH
Q 001292 366 ML----YSVLD---------------------AGNFFVIPGSPADVWAVEAYSKSHEK--------------------YQ 400 (1106)
Q Consensus 366 ~~----~~gi~---------------------~~KI~VIpN~GVDl~~~e~F~ps~s~--------------------~~ 400 (1106)
.. |.+++ ..++.|||| |||+ +.|.|.... ..
T Consensus 394 ~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPp-GVD~---~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (1050)
T TIGR02468 394 EEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPP-GMEF---SHIVPHDGDMDGETEGNEEHPAKPDPPIWSE 469 (1050)
T ss_pred HHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCC-CCcH---HHccCCCccccchhcccccccccccchhhHH
Confidence 42 33333 238999998 8998 777763110 12
Q ss_pred HHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCc---------cHHHH
Q 001292 401 LRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG---------YNDAL 471 (1106)
Q Consensus 401 LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gper---------Y~eeL 471 (1106)
++ .+...++.++|+++||+.+ .||++.+|+|+..+... ...++++ +|+|.++.. +...+
T Consensus 470 l~-r~~~~pdkpvIL~VGRL~p----~KGi~~LIeAf~~L~~l-----~~~~nL~--LIiG~gdd~d~l~~~~~~~l~~L 537 (1050)
T TIGR02468 470 IM-RFFTNPRKPMILALARPDP----KKNITTLVKAFGECRPL-----RELANLT--LIMGNRDDIDEMSSGSSSVLTSV 537 (1050)
T ss_pred HH-hhcccCCCcEEEEEcCCcc----ccCHHHHHHHHHHhHhh-----ccCCCEE--EEEecCchhhhhhccchHHHHHH
Confidence 22 3345678889999999998 99999999999877531 1125554 456765431 24567
Q ss_pred HHHHHHcCCCCCcEEEcCC--hhhHHHHHHHc----CeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCC
Q 001292 472 QEVASRLGLLEHSVRHYGF--NGDVNGVLLMA----DIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGA 545 (1106)
Q Consensus 472 keLaeklGL~d~rV~flG~--~eDL~~LyaaA----DVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~ 545 (1106)
+++++++++.+ +|.|+|+ .+++..+|..| |+||+||.+| +||++++||||||+|||+++.||+.|+|.++.
T Consensus 538 ~~li~~lgL~g-~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~E--gFGLvlLEAMAcGlPVVASdvGG~~EII~~g~ 614 (1050)
T TIGR02468 538 LKLIDKYDLYG-QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIE--PFGLTLIEAAAHGLPMVATKNGGPVDIHRVLD 614 (1050)
T ss_pred HHHHHHhCCCC-eEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccC--CCCHHHHHHHHhCCCEEEeCCCCcHHHhccCC
Confidence 88999999997 9999995 58899999988 6999999987 99999999999999999999999999999999
Q ss_pred eEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC
Q 001292 546 QVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNF 608 (1106)
Q Consensus 546 nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk~ 608 (1106)
+|+++++.|+++|+++|..+++|+++ +++|+.+|++.+.++.|..++.+|.+++..+...
T Consensus 615 nGlLVdP~D~eaLA~AL~~LL~Dpel---r~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~ 674 (1050)
T TIGR02468 615 NGLLVDPHDQQAIADALLKLVADKQL---WAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPR 674 (1050)
T ss_pred cEEEECCCCHHHHHHHHHHHhhCHHH---HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999998 6889999999998888888889999999988644
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.1e-30 Score=284.20 Aligned_cols=322 Identities=17% Similarity=0.208 Sum_probs=249.8
Q ss_pred EEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch--------------------HHHHHHhHHHHHhhccCccE
Q 001292 227 LILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH--------------------SLWEQIAGQISILGQEQYSL 286 (1106)
Q Consensus 227 lVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~--------------------~i~r~lg~lvkiIr~~~pDi 286 (1106)
.+++++..||.+..+..++++|+++||+|.+++....... ..+.....+.+.++..++|+
T Consensus 2 ~~~~~~~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~di 81 (355)
T cd03819 2 QVLPALESGGVERGTLELARALVERGHRSLVASAGGRLVAELEAEGSRHIKLPFISKNPLRILLNVARLRRLIREEKVDI 81 (355)
T ss_pred ccchhhccCcHHHHHHHHHHHHHHcCCEEEEEcCCCchHHHHHhcCCeEEEccccccchhhhHHHHHHHHHHHHHcCCCE
Confidence 3567888899999999999999999999999875321110 01112222556677789999
Q ss_pred EEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhh
Q 001292 287 IDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPM 366 (1106)
Q Consensus 287 Ih~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~ 366 (1106)
||.+.....+...+..+ ..++|+|+++|+.. .... .+...+..+|.+++.+.....
T Consensus 82 i~~~~~~~~~~~~~~~~----------~~~~~~i~~~h~~~--------~~~~------~~~~~~~~~~~vi~~s~~~~~ 137 (355)
T cd03819 82 VHARSRAPAWSAYLAAR----------RTRPPFVTTVHGFY--------SVNF------RYNAIMARGDRVIAVSNFIAD 137 (355)
T ss_pred EEECCCchhHHHHHHHH----------hcCCCEEEEeCCch--------hhHH------HHHHHHHhcCEEEEeCHHHHH
Confidence 99987665555544432 25799999999862 1100 223446689999998866554
Q ss_pred h---hcCCCCCCEEEeCCCCCCcccccccCcch----hHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHH
Q 001292 367 L---YSVLDAGNFFVIPGSPADVWAVEAYSKSH----EKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGP 439 (1106)
Q Consensus 367 ~---~~gi~~~KI~VIpN~GVDl~~~e~F~ps~----s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~ 439 (1106)
. ..+++..++.+||| |+|. ..|.+.. ....+|++++.+++.++++++||+.. .||.+.+++++..
T Consensus 138 ~~~~~~~~~~~k~~~i~n-gi~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Gr~~~----~Kg~~~li~~~~~ 209 (355)
T cd03819 138 HIRENYGVDPDRIRVIPR-GVDL---DRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTR----WKGQEVFIEALAR 209 (355)
T ss_pred HHHHhcCCChhhEEEecC-Cccc---cccCccccchHHHHHHHHHcCCCCCceEEEEeecccc----ccCHHHHHHHHHH
Confidence 4 34667788999998 7987 4554321 11236778888888999999999887 8999999999988
Q ss_pred hHHHHHhhccCCCCeEEEEEEcCCCCc--cHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEcc-CCCCCCCc
Q 001292 440 LLIKYARRNSVEGSFKFVFLCGNSTDG--YNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGS-SQVEQGFP 516 (1106)
Q Consensus 440 Ll~k~aklk~~~PdikfLIIVG~Gper--Y~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS-~~EeEGFG 516 (1106)
+.+. +++++ ++++|.++.. +.+.+.+.++++++.+ +|.|+|+.+++..+|+.||++++|| ..| +||
T Consensus 210 l~~~-------~~~~~-l~ivG~~~~~~~~~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~l~~ad~~i~ps~~~e--~~~ 278 (355)
T cd03819 210 LKKD-------DPDVH-LLIVGDAQGRRFYYAELLELIKRLGLQD-RVTFVGHCSDMPAAYALADIVVSASTEPE--AFG 278 (355)
T ss_pred HHhc-------CCCeE-EEEEECCcccchHHHHHHHHHHHcCCcc-eEEEcCCcccHHHHHHhCCEEEecCCCCC--CCc
Confidence 7642 36787 6888987643 3455667788889887 8999999999999999999999999 554 999
Q ss_pred HHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHh-CcccHHHHHHHHHHHHHHHHHhcHHHH
Q 001292 517 SLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS-NGKLSKFARTVASAGRLHAKNMLALDC 594 (1106)
Q Consensus 517 lvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLs-DpelRk~r~~mGe~Are~ake~fsee~ 594 (1106)
++++||||+|+|||+++.++..|++.++.+|++++++|+++++++|..++. +++. +.+++++|++.++++|+.+.
T Consensus 279 ~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~---~~~~~~~a~~~~~~~f~~~~ 354 (355)
T cd03819 279 RTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEG---RAKMFAKARMCVETLFSYDR 354 (355)
T ss_pred hHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHH---HHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999999999999999999999999975554 6665 68999999999999998653
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-29 Score=291.67 Aligned_cols=347 Identities=14% Similarity=0.116 Sum_probs=255.0
Q ss_pred CEEEEEeCCCCC--ChhHHHHHHHHHHHHHCCCEEEEEEcCCCC--------------c-------------------hH
Q 001292 223 PRIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGN--------------S-------------------HS 267 (1106)
Q Consensus 223 ~RIalVlg~L~~--gGesl~vv~LakaLqe~GyeVtV~t~~dg~--------------~-------------------~~ 267 (1106)
+||++|...+.+ +|.+..+..+++.|.++||+|+|+|..+.. . ..
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~~~~~ 80 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVPKQPS 80 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCCCCcc
Confidence 589999876654 788889999999999999999999864210 0 00
Q ss_pred HH-HHH-------hHHHHHhh--ccCccEEEEccccH--HHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccch--
Q 001292 268 LW-EQI-------AGQISILG--QEQYSLIDWSIFDG--IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLP-- 333 (1106)
Q Consensus 268 i~-r~l-------g~lvkiIr--~~~pDiIh~~~~~~--i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~-- 333 (1106)
.+ +.. .....+++ ..++|+||.+.+.. .+...+.++. .++|+|+++|+........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~----------~~~~~v~~~~d~~~~~~~~~~ 150 (412)
T PRK10307 81 GLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARL----------SGARTWLHIQDYEVDAAFGLG 150 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHh----------hCCCEEEEeccCCHHHHHHhC
Confidence 00 000 00111122 16799999976443 2233333322 5789999998742110000
Q ss_pred hhhhhhHHhHHHH-HHHHhccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcch--hHHHHHHHcCCC
Q 001292 334 VYVERGFQNLLSY-WKSVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSH--EKYQLRKENGFL 408 (1106)
Q Consensus 334 ~Y~~~gleklis~-~~~~l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~--s~~~LR~~lGL~ 408 (1106)
......+.++... ....++.+|.|++.|....+. ..+.+..++.+||| |+|. +.|.+.. ....++++++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~i~vi~n-gvd~---~~~~~~~~~~~~~~~~~~~~~ 226 (412)
T PRK10307 151 LLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAREKGVAAEKVIFFPN-WSEV---ARFQPVADADVDALRAQLGLP 226 (412)
T ss_pred CccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHcCCCcccEEEECC-CcCH---hhcCCCCccchHHHHHHcCCC
Confidence 0000001111111 123577899999999776654 34567778999998 7997 5565432 234578889998
Q ss_pred CCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEc
Q 001292 409 KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY 488 (1106)
Q Consensus 409 ~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~fl 488 (1106)
++.++++++|++.. .||++.+++|++.+. ..++++ |+|+|+|+.. ++++++++++++. +|.|+
T Consensus 227 ~~~~~i~~~G~l~~----~kg~~~li~a~~~l~--------~~~~~~-l~ivG~g~~~--~~l~~~~~~~~l~--~v~f~ 289 (412)
T PRK10307 227 DGKKIVLYSGNIGE----KQGLELVIDAARRLR--------DRPDLI-FVICGQGGGK--ARLEKMAQCRGLP--NVHFL 289 (412)
T ss_pred CCCEEEEEcCcccc----ccCHHHHHHHHHHhc--------cCCCeE-EEEECCChhH--HHHHHHHHHcCCC--ceEEe
Confidence 88899999999887 899999999997552 126788 6889999975 8999999999986 69999
Q ss_pred CC--hhhHHHHHHHcCeEEEccCCCCCC----CcHHHHHHHHhCCCEEecCCCC--chhhhccCCeEEEEcCCCHHHHHH
Q 001292 489 GF--NGDVNGVLLMADIVLYGSSQVEQG----FPSLIVRAMTFGIPVITPDFPI--IKEYVAEGAQVIFFQKDNPEGLSR 560 (1106)
Q Consensus 489 G~--~eDL~~LyaaADVfV~PS~~EeEG----FGlvLLEAMA~G~PVIASD~gG--I~EiV~Dg~nG~LV~~~D~eeLAe 560 (1106)
|+ .+++..+|++||++++||..| + +|.+++||||||+|||+++.+| +.+++. .+|++++++|+++|++
T Consensus 290 G~~~~~~~~~~~~~aDi~v~ps~~e--~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~ 365 (412)
T PRK10307 290 PLQPYDRLPALLKMADCHLLPQKAG--AADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVA 365 (412)
T ss_pred CCCCHHHHHHHHHhcCEeEEeeccC--cccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHH
Confidence 95 478999999999999999876 5 6888999999999999999876 468785 5999999999999999
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHHHHHHhcH-HHHHHHHHHHHHHHhc
Q 001292 561 AFSLFISNGKLSKFARTVASAGRLHAKNMLA-LDCVTRYARILENVLN 607 (1106)
Q Consensus 561 AI~~LLsDpelRk~r~~mGe~Are~ake~fs-ee~v~~Y~eLyeslLk 607 (1106)
+|.++++|+++ +.+|+++|++.+++.|+ +..+.+|.++|++++.
T Consensus 366 ~i~~l~~~~~~---~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~ 410 (412)
T PRK10307 366 AIAALARQALL---RPKLGTVAREYAERTLDKENVLRQFIADIRGLVA 410 (412)
T ss_pred HHHHHHhCHHH---HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 99999999987 68999999999987655 5566699999998764
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.4e-30 Score=302.98 Aligned_cols=353 Identities=12% Similarity=0.116 Sum_probs=258.7
Q ss_pred CCCEEEEEeCCCCC----ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch------------------------------
Q 001292 221 RPPRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH------------------------------ 266 (1106)
Q Consensus 221 r~~RIalVlg~L~~----gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~------------------------------ 266 (1106)
++++|++|..++.+ ||-.-.+..|.++|+++|++|.|+.+..+...
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 81 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLFGGPARLLAARAGGL 81 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeCCceEEEEEEEeCCc
Confidence 46899999988866 88889999999999999999988775221100
Q ss_pred -------H--------HH------------HHHh----HHHHHh----hccCccEEEEccccHHHHHHHHHHHhhhhccc
Q 001292 267 -------S--------LW------------EQIA----GQISIL----GQEQYSLIDWSIFDGIIADSLEAKEAISSLMQ 311 (1106)
Q Consensus 267 -------~--------i~------------r~lg----~lvkiI----r~~~pDiIh~~~~~~i~v~~La~k~~idII~t 311 (1106)
. ++ ..+. +...++ ...+||+||+|.+.+.++..+.....
T Consensus 82 ~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~~------ 155 (485)
T PRK14099 82 DLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYSG------ 155 (485)
T ss_pred eEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhCC------
Confidence 0 00 0000 011222 24689999999999888776554211
Q ss_pred CCCCCCcEEEEEcCCcccccchh------------hhhhhHHh--HHHHHHHHhccccEEEecCCChhhhh----cC---
Q 001292 312 EPFHSIPLVWIIQEDSLANRLPV------------YVERGFQN--LLSYWKSVFSRVNVIVFPDYTLPMLY----SV--- 370 (1106)
Q Consensus 312 e~~~gIPVI~tIHna~Ls~r~~~------------Y~~~glek--lis~~~~~l~~AD~VIa~S~~~~~~~----~g--- 370 (1106)
..++|+|+|+|+......... +...+.+. .+...+..+..+|.|+++|....... .+
T Consensus 156 --~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl 233 (485)
T PRK14099 156 --RPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGL 233 (485)
T ss_pred --CCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHHHhcccCCcCh
Confidence 246899999999543221110 00000000 01123456789999999997765431 11
Q ss_pred -----CCCCCEEEeCCCCCCcccccccCcchh------------------HHHHHHHcCCCC--CcEEEEEEcccCcccc
Q 001292 371 -----LDAGNFFVIPGSPADVWAVEAYSKSHE------------------KYQLRKENGFLK--DEIVVVVVGSSFFYNE 425 (1106)
Q Consensus 371 -----i~~~KI~VIpN~GVDl~~~e~F~ps~s------------------~~~LR~~lGL~~--d~~VIL~VGRl~~y~k 425 (1106)
.+..++.+|+| |+|. +.|.|... +..+++++|++. +.++|+++||+.+
T Consensus 234 ~~~l~~~~~ki~vI~N-GID~---~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~--- 306 (485)
T PRK14099 234 DGLLRQRADRLSGILN-GIDT---AVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSW--- 306 (485)
T ss_pred HHHHHhhCCCeEEEec-CCch---hhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCc---
Confidence 23678999998 8998 55655321 356788999974 5789999999998
Q ss_pred ccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHH-HHcCeE
Q 001292 426 LSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVL-LMADIV 504 (1106)
Q Consensus 426 g~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~Ly-aaADVf 504 (1106)
+||++.+++|+..+.+ .+++ |+|+|.|+..+.+.+++++++++ +..+.++|+.+++..+| +.||++
T Consensus 307 -~KG~d~Li~A~~~l~~---------~~~~-lvivG~G~~~~~~~l~~l~~~~~--~~v~~~~G~~~~l~~~~~a~aDif 373 (485)
T PRK14099 307 -QKGLDLLLEALPTLLG---------EGAQ-LALLGSGDAELEARFRAAAQAYP--GQIGVVIGYDEALAHLIQAGADAL 373 (485)
T ss_pred -cccHHHHHHHHHHHHh---------cCcE-EEEEecCCHHHHHHHHHHHHHCC--CCEEEEeCCCHHHHHHHHhcCCEE
Confidence 9999999999987753 2456 68889887545688888888764 31347999988999887 579999
Q ss_pred EEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccC---------CeEEEEcCCCHHHHHHHHHH---HHhCcccH
Q 001292 505 LYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEG---------AQVIFFQKDNPEGLSRAFSL---FISNGKLS 572 (1106)
Q Consensus 505 V~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg---------~nG~LV~~~D~eeLAeAI~~---LLsDpelR 572 (1106)
++||.+| +||++++|||+||+|+|++++||++|+|.++ .+|+++++.|+++|+++|.+ +++|++.
T Consensus 374 v~PS~~E--~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~- 450 (485)
T PRK14099 374 LVPSRFE--PCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVA- 450 (485)
T ss_pred EECCccC--CCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHH-
Confidence 9999987 9999999999999988889999999999775 58999999999999999997 6778876
Q ss_pred HHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC
Q 001292 573 KFARTVASAGRLHAKNMLALDCVTRYARILENVLNF 608 (1106)
Q Consensus 573 k~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk~ 608 (1106)
+++|+++++ .+++.|+.++++|.++|++++..
T Consensus 451 --~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 451 --WRRLQRNGM--TTDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred --HHHHHHHhh--hhcCChHHHHHHHHHHHHHHHhh
Confidence 588888886 35667788888999999998753
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.7e-30 Score=282.31 Aligned_cols=327 Identities=18% Similarity=0.209 Sum_probs=244.4
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCC--chH------------------HHHHHhHHHHHhhccC
Q 001292 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN--SHS------------------LWEQIAGQISILGQEQ 283 (1106)
Q Consensus 224 RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~--~~~------------------i~r~lg~lvkiIr~~~ 283 (1106)
||+++.+++..||.+..+..++++|.+.||+|++++..... ... .+..+..+.+.++..+
T Consensus 1 kIl~~~~~~~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
T cd03812 1 KILHIVGTMNRGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDYDDEIEKLGGKIYYIPARKKNPLKYFKKLYKLIKKNK 80 (358)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHhcCccceEEEEEEeCCCCcchHHHHHHcCCeEEEecCCCccHHHHHHHHHHHHhcCC
Confidence 68999999999999999999999999999999999985533 111 1112222455567789
Q ss_pred ccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCc-EEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCC
Q 001292 284 YSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIP-LVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDY 362 (1106)
Q Consensus 284 pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIP-VI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~ 362 (1106)
+|+||++......+..+..+. .++| ++++.|+............. ..+.. ...+..++.+++.+.
T Consensus 81 ~Dvv~~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~i~~s~ 146 (358)
T cd03812 81 YDIVHVHGSSASGFILLAAKK----------AGVKVRIAHSHNTSDSHDKKKKILK--YKVLR--KLINRLATDYLACSE 146 (358)
T ss_pred CCEEEEeCcchhHHHHHHHhh----------CCCCeEEEEeccccccccccchhhH--HHHHH--HHHHhcCCEEEEcCH
Confidence 999999887654444444332 2344 46677775332222111000 00111 234567888888886
Q ss_pred Chhhh-hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhH
Q 001292 363 TLPML-YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLL 441 (1106)
Q Consensus 363 ~~~~~-~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll 441 (1106)
..... .......++.+||| |+|+ ..+.+.......+...+..++.++|+++||+.+ .||++.+++|+..|.
T Consensus 147 ~~~~~~~~~~~~~~~~vi~n-gvd~---~~~~~~~~~~~~~~~~~~~~~~~~i~~vGr~~~----~Kg~~~li~a~~~l~ 218 (358)
T cd03812 147 EAGKWLFGKVKNKKFKVIPN-GIDL---EKFIFNEEIRKKRRELGILEDKFVIGHVGRFSE----QKNHEFLIEIFAELL 218 (358)
T ss_pred HHHHHHHhCCCcccEEEEec-cCcH---HHcCCCchhhhHHHHcCCCCCCEEEEEEecccc----ccChHHHHHHHHHHH
Confidence 65544 22255678999998 7997 555443322223566777888999999999888 899999999998886
Q ss_pred HHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHH
Q 001292 442 IKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVR 521 (1106)
Q Consensus 442 ~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLE 521 (1106)
++ +++++ ++|+|+++.. +.+++.++++++.+ +|.++|+.+++..+|+.||++|+||..| ++|++++|
T Consensus 219 ~~-------~~~~~-l~ivG~g~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adi~v~ps~~E--~~~~~~lE 285 (358)
T cd03812 219 KK-------NPNAK-LLLVGDGELE--EEIKKKVKELGLED-KVIFLGVRNDVPELLQAMDVFLFPSLYE--GLPLVLIE 285 (358)
T ss_pred Hh-------CCCeE-EEEEeCCchH--HHHHHHHHhcCCCC-cEEEecccCCHHHHHHhcCEEEeccccc--CCCHHHHH
Confidence 43 37888 6889999865 88999999999987 9999999889999999999999999986 99999999
Q ss_pred HHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHh
Q 001292 522 AMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNM 589 (1106)
Q Consensus 522 AMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~ 589 (1106)
|||+|+|||+++.++..+++.+ ..|++...+++++++++|.++++|+++ +++++..+......+
T Consensus 286 Ama~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~---~~~~~~~~~~~~~~~ 349 (358)
T cd03812 286 AQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLKSEDRR---ERSSESIKKKGLDAD 349 (358)
T ss_pred HHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHHhCcch---hhhhhhhhhccchhh
Confidence 9999999999999999999988 466677767889999999999999998 466666655544433
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=314.36 Aligned_cols=346 Identities=14% Similarity=0.068 Sum_probs=259.4
Q ss_pred CCCCEEEEEeCCCCC----ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch-----------------------------
Q 001292 220 VRPPRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH----------------------------- 266 (1106)
Q Consensus 220 ~r~~RIalVlg~L~~----gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~----------------------------- 266 (1106)
..+++|++|+..+.+ ||..-.+..|.++|+++|++|.|+++..+...
T Consensus 585 ~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G 664 (1036)
T PLN02316 585 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKVEG 664 (1036)
T ss_pred CCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEEECC
Confidence 345899999988765 99999999999999999999999988543100
Q ss_pred ----------HH------------HHHHh----HHHHHhhc--cCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCc
Q 001292 267 ----------SL------------WEQIA----GQISILGQ--EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIP 318 (1106)
Q Consensus 267 ----------~i------------~r~lg----~lvkiIr~--~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIP 318 (1106)
.. ...+. +...+++. .+||+||+|.+.+.++..+.+.... .....++|
T Consensus 665 V~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~----~~~~~~~p 740 (1036)
T PLN02316 665 LSVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYA----HYGLSKAR 740 (1036)
T ss_pred cEEEEEeccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhh----hhccCCCC
Confidence 00 00000 02223322 5799999999988887766654211 01135789
Q ss_pred EEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhh---hcCCC--CCCEEEeCCCCCCcccccccC
Q 001292 319 LVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML---YSVLD--AGNFFVIPGSPADVWAVEAYS 393 (1106)
Q Consensus 319 VI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~---~~gi~--~~KI~VIpN~GVDl~~~e~F~ 393 (1106)
+|+|+|+.... . .. ....+..+|.|+++|...... ...+. ..++.+|+| |||+ +.|.
T Consensus 741 ~V~TiHnl~~~-------~----n~---lk~~l~~AD~ViTVS~tya~EI~~~~~l~~~~~Kl~vI~N-GID~---~~w~ 802 (1036)
T PLN02316 741 VVFTIHNLEFG-------A----NH---IGKAMAYADKATTVSPTYSREVSGNSAIAPHLYKFHGILN-GIDP---DIWD 802 (1036)
T ss_pred EEEEeCCcccc-------h----hH---HHHHHHHCCEEEeCCHHHHHHHHhccCcccccCCEEEEEC-Cccc---cccC
Confidence 99999985311 1 01 123567899999999776543 12232 478999998 8998 4443
Q ss_pred cc-------------------hhHHHHHHHcCCCC-CcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCC
Q 001292 394 KS-------------------HEKYQLRKENGFLK-DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGS 453 (1106)
Q Consensus 394 ps-------------------~s~~~LR~~lGL~~-d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~Pd 453 (1106)
|. ..+..+++++|++. +.++|++|||+.. +||++++++|+..++. .+
T Consensus 803 P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~----qKGvdlLi~Al~~ll~---------~~ 869 (1036)
T PLN02316 803 PYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTH----QKGIHLIKHAIWRTLE---------RN 869 (1036)
T ss_pred CcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEecccc----ccCHHHHHHHHHHHhh---------cC
Confidence 32 12456788999984 6799999999998 9999999999987763 35
Q ss_pred eEEEEEEcCCCCc-cHHHHHHHHHHcCC--CCCcEEEcCChhh-H-HHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCC
Q 001292 454 FKFVFLCGNSTDG-YNDALQEVASRLGL--LEHSVRHYGFNGD-V-NGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIP 528 (1106)
Q Consensus 454 ikfLIIVG~Gper-Y~eeLkeLaeklGL--~d~rV~flG~~eD-L-~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~P 528 (1106)
++ |+|+|.||+. +.+.++++++++++ ++ +|.|.|..++ + ..+|++||+||+||.+| +||+++||||+||+|
T Consensus 870 ~q-lVIvG~Gpd~~~e~~l~~La~~Lg~~~~~-rV~f~g~~de~lah~iyaaADiflmPS~~E--P~GLvqLEAMa~Gtp 945 (1036)
T PLN02316 870 GQ-VVLLGSAPDPRIQNDFVNLANQLHSSHHD-RARLCLTYDEPLSHLIYAGADFILVPSIFE--PCGLTQLTAMRYGSI 945 (1036)
T ss_pred cE-EEEEeCCCCHHHHHHHHHHHHHhCccCCC-eEEEEecCCHHHHHHHHHhCcEEEeCCccc--CccHHHHHHHHcCCC
Confidence 67 5789998753 35788899998876 44 8998875544 3 37999999999999997 999999999999999
Q ss_pred EEecCCCCchhhhccC-------------CeEEEEcCCCHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHHHHHh-cHHH
Q 001292 529 VITPDFPIIKEYVAEG-------------AQVIFFQKDNPEGLSRAFSLFISNG-KLSKFARTVASAGRLHAKNM-LALD 593 (1106)
Q Consensus 529 VIASD~gGI~EiV~Dg-------------~nG~LV~~~D~eeLAeAI~~LLsDp-elRk~r~~mGe~Are~ake~-fsee 593 (1106)
||++++||++++|.|+ .+|+++++.|+++|+.+|.+++++. +. ...++..+++.+.+. .|..
T Consensus 946 pVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~---~~~~~~~~r~~m~~dFSW~~ 1022 (1036)
T PLN02316 946 PVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDG---RDWFNSLCKRVMEQDWSWNR 1022 (1036)
T ss_pred eEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhh---HHHHHHHHHHHHHhhCCHHH
Confidence 9999999999999884 6999999999999999999999874 33 455777888776654 5566
Q ss_pred HHHHHHHHHHHHhc
Q 001292 594 CVTRYARILENVLN 607 (1106)
Q Consensus 594 ~v~~Y~eLyeslLk 607 (1106)
.+.+|.++|+.+.+
T Consensus 1023 ~A~~Y~~LY~~a~~ 1036 (1036)
T PLN02316 1023 PALDYMELYHSARK 1036 (1036)
T ss_pred HHHHHHHHHHHHhC
Confidence 66799999998753
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=297.63 Aligned_cols=348 Identities=16% Similarity=0.159 Sum_probs=254.9
Q ss_pred CEEEEEeCCCCC----ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchH-------------------------------
Q 001292 223 PRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS------------------------------- 267 (1106)
Q Consensus 223 ~RIalVlg~L~~----gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~------------------------------- 267 (1106)
++|++|+.++.+ ||...++..|.++|+++|++|.|+++..+....
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 579999888544 899999999999999999999999774321100
Q ss_pred ------------------HH---------HH--Hh-HHHHHhh--ccCccEEEEccccHHHHHHHHHHHhhhhcccCCCC
Q 001292 268 ------------------LW---------EQ--IA-GQISILG--QEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFH 315 (1106)
Q Consensus 268 ------------------i~---------r~--lg-~lvkiIr--~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~ 315 (1106)
++ +. +. .....++ ..+||+||+|.+.+.++..+.+...- ..
T Consensus 81 ~v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~-------~~ 153 (473)
T TIGR02095 81 GVPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYR-------PN 153 (473)
T ss_pred CceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhcc-------CC
Confidence 00 00 00 0222332 25899999999988887776664320 01
Q ss_pred CCcEEEEEcCCcccccchh------------hhhhhHH--hHHHHHHHHhccccEEEecCCChhhhh----c--C-----
Q 001292 316 SIPLVWIIQEDSLANRLPV------------YVERGFQ--NLLSYWKSVFSRVNVIVFPDYTLPMLY----S--V----- 370 (1106)
Q Consensus 316 gIPVI~tIHna~Ls~r~~~------------Y~~~gle--klis~~~~~l~~AD~VIa~S~~~~~~~----~--g----- 370 (1106)
++|+|+|+|+......... +....+. ..+...+..+..+|.|+++|....... . +
T Consensus 154 ~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l 233 (473)
T TIGR02095 154 PIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVL 233 (473)
T ss_pred CCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHH
Confidence 4899999999532111110 0000000 012223456789999999987654431 1 1
Q ss_pred -CCCCCEEEeCCCCCCcccccccCcch------------------hHHHHHHHcCCCC--CcEEEEEEcccCccccccCC
Q 001292 371 -LDAGNFFVIPGSPADVWAVEAYSKSH------------------EKYQLRKENGFLK--DEIVVVVVGSSFFYNELSWD 429 (1106)
Q Consensus 371 -i~~~KI~VIpN~GVDl~~~e~F~ps~------------------s~~~LR~~lGL~~--d~~VIL~VGRl~~y~kg~Kg 429 (1106)
.++.++.+|+| |+|. +.|.|.. .+..+++++|++. +.++|+++||+.+ +||
T Consensus 234 ~~~~~ki~~I~N-Gid~---~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~----~Kg 305 (473)
T TIGR02095 234 KARSGKLRGILN-GIDT---EVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQ----QKG 305 (473)
T ss_pred HhcCCCeEEEeC-CCCc---cccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCcc----ccC
Confidence 13568999998 8998 5565431 2456888999976 7899999999998 999
Q ss_pred HHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcC-C-hhhHHHHHHHcCeEEEc
Q 001292 430 YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG-F-NGDVNGVLLMADIVLYG 507 (1106)
Q Consensus 430 ~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG-~-~eDL~~LyaaADVfV~P 507 (1106)
++.+++|+..+.+ .+++ |+|+|.|+..+.+++++++++++ . +|.+.+ . .+++..+|+.||++++|
T Consensus 306 ~~~li~a~~~l~~---------~~~~-lvi~G~g~~~~~~~l~~~~~~~~--~-~v~~~~~~~~~~~~~~~~~aDv~l~p 372 (473)
T TIGR02095 306 VDLLLAALPELLE---------LGGQ-LVVLGTGDPELEEALRELAERYP--G-NVRVIIGYDEALAHLIYAGADFILMP 372 (473)
T ss_pred hHHHHHHHHHHHH---------cCcE-EEEECCCCHHHHHHHHHHHHHCC--C-cEEEEEcCCHHHHHHHHHhCCEEEeC
Confidence 9999999987763 2367 68899986445678888887654 3 566655 3 35578999999999999
Q ss_pred cCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccC------CeEEEEcCCCHHHHHHHHHHHHh----CcccHHHHHH
Q 001292 508 SSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEG------AQVIFFQKDNPEGLSRAFSLFIS----NGKLSKFART 577 (1106)
Q Consensus 508 S~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg------~nG~LV~~~D~eeLAeAI~~LLs----DpelRk~r~~ 577 (1106)
|.+| +||++++|||+||+|||+++.+|+.|+|.++ .+|+++++.|+++|+++|.++++ +++. .++
T Consensus 373 S~~E--~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~---~~~ 447 (473)
T TIGR02095 373 SRFE--PCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSL---WEA 447 (473)
T ss_pred CCcC--CcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHH---HHH
Confidence 9987 9999999999999999999999999999987 89999999999999999999888 7776 578
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 001292 578 VASAGRLHAKNMLALDCVTRYARILENV 605 (1106)
Q Consensus 578 mGe~Are~ake~fsee~v~~Y~eLyesl 605 (1106)
|++++.+ +++.|+.++++|.++|+++
T Consensus 448 ~~~~~~~--~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 448 LQKNAMS--QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHHHHhc--cCCCcHHHHHHHHHHHHhC
Confidence 8888753 4566778888999999863
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-29 Score=284.68 Aligned_cols=336 Identities=13% Similarity=0.093 Sum_probs=245.8
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch-----HHHHHH-hH-----------H----HHH----
Q 001292 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-----SLWEQI-AG-----------Q----ISI---- 278 (1106)
Q Consensus 224 RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~-----~i~r~l-g~-----------l----vki---- 278 (1106)
||++|.+.+..||.+..+.++++.|.+.|++|++++..+.... ..-..+ +. . ...
T Consensus 1 ki~~~~~~~~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
T cd03792 1 KVLHVNSTPYGGGVAEILHSLVPLMRDLGVDTRWEVIKGDPEFFNVTKKFHNALQGADIELSEEEKEIYLEWNEENAERP 80 (372)
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHHcCCCceEEecCCChhHHHHHHHhhHhhcCCCCCCCHHHHHHHHHHHHHHhccc
Confidence 6899999999999999999999999999999999987554311 000001 00 0 111
Q ss_pred hhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEE
Q 001292 279 LGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358 (1106)
Q Consensus 279 Ir~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VI 358 (1106)
+...+||+||+|.+....+..... ..++|+|++.|+..... .. . ..++ ....++.+|.++
T Consensus 81 ~~~~~~Dvv~~h~~~~~~~~~~~~-----------~~~~~~i~~~H~~~~~~-~~--~---~~~~---~~~~~~~~d~~i 140 (372)
T cd03792 81 LLDLDADVVVIHDPQPLALPLFKK-----------KRGRPWIWRCHIDLSSP-NR--R---VWDF---LQPYIEDYDAAV 140 (372)
T ss_pred cccCCCCEEEECCCCchhHHHhhh-----------cCCCeEEEEeeeecCCC-cH--H---HHHH---HHHHHHhCCEEe
Confidence 224689999999876433322221 13789999999852111 00 0 0111 233466788888
Q ss_pred ecCCChhhhhcCCCCCCEEEeCCCCCCccccc--ccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHH
Q 001292 359 FPDYTLPMLYSVLDAGNFFVIPGSPADVWAVE--AYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHD 436 (1106)
Q Consensus 359 a~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e--~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA 436 (1106)
+++.... ...++..++ +||| |+|..... .+.+ ......+++++++++.++|+++||+.+ .||++.+++|
T Consensus 141 ~~~~~~~--~~~~~~~~~-vipn-gvd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~vgrl~~----~Kg~~~ll~a 211 (372)
T cd03792 141 FHLPEYV--PPQVPPRKV-IIPP-SIDPLSGKNRELSP-ADIEYILEKYGIDPERPYITQVSRFDP----WKDPFGVIDA 211 (372)
T ss_pred ecHHHhc--CCCCCCceE-EeCC-CCCCCccccCCCCH-HHHHHHHHHhCCCCCCcEEEEEecccc----ccCcHHHHHH
Confidence 7773221 234455555 8997 79862100 1111 234467888999889999999999988 9999999999
Q ss_pred HHHhHHHHHhhccCCCCeEEEEEEcCCCCc---cHHHHHHHHHHcCCCCCcEEEcCCh----hhHHHHHHHcCeEEEccC
Q 001292 437 VGPLLIKYARRNSVEGSFKFVFLCGNSTDG---YNDALQEVASRLGLLEHSVRHYGFN----GDVNGVLLMADIVLYGSS 509 (1106)
Q Consensus 437 ~k~Ll~k~aklk~~~PdikfLIIVG~Gper---Y~eeLkeLaeklGL~d~rV~flG~~----eDL~~LyaaADVfV~PS~ 509 (1106)
++.+.+. .|+++ |+++|.++.. +.+.++++.+..++.+ +|.|+|.. +++..+|++||++++||.
T Consensus 212 ~~~l~~~-------~~~~~-l~i~G~g~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~ 282 (372)
T cd03792 212 YRKVKER-------VPDPQ-LVLVGSGATDDPEGWIVYEEVLEYAEGDP-DIHVLTLPPVSDLEVNALQRASTVVLQKSI 282 (372)
T ss_pred HHHHHhh-------CCCCE-EEEEeCCCCCCchhHHHHHHHHHHhCCCC-CeEEEecCCCCHHHHHHHHHhCeEEEeCCC
Confidence 9877642 26777 6889988642 1234566666677776 89998854 689999999999999999
Q ss_pred CCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH-
Q 001292 510 QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKN- 588 (1106)
Q Consensus 510 ~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake- 588 (1106)
.| |||++++||||||+|||+++.+++.+++.++.+|++++ ++++++.+|.++++++++ +++|++++++.+.+
T Consensus 283 ~E--g~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a~~i~~ll~~~~~---~~~~~~~a~~~~~~~ 355 (372)
T cd03792 283 RE--GFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAAVRILYLLRDPEL---RRKMGANAREHVREN 355 (372)
T ss_pred cc--CCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHHHHHHHHHcCHHH---HHHHHHHHHHHHHHH
Confidence 87 99999999999999999999999999999999999886 577899999999999887 68999999998765
Q ss_pred hcHHHHHHHHHHHHHH
Q 001292 589 MLALDCVTRYARILEN 604 (1106)
Q Consensus 589 ~fsee~v~~Y~eLyes 604 (1106)
+.|+..+.+|.++|+.
T Consensus 356 ~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 356 FLITRHLKDYLYLISK 371 (372)
T ss_pred cCHHHHHHHHHHHHHh
Confidence 5556677799999986
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-29 Score=272.89 Aligned_cols=343 Identities=15% Similarity=0.159 Sum_probs=247.8
Q ss_pred EEEEEeCCC--CCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHHHH------------------HHh-------HHH
Q 001292 224 RIGLILGNM--AKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWE------------------QIA-------GQI 276 (1106)
Q Consensus 224 RIalVlg~L--~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i~r------------------~lg-------~lv 276 (1106)
||++|++.+ ..||.+..+..+++.|.+.|++|++++..++....... ... ...
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALNGVPVKLFSINVAYGLNLARYLFPPSLLAW 80 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhccCceeeecccchhhhhhhhhhccChhHHHH
Confidence 689999998 56899999999999999999999999986543111100 000 011
Q ss_pred HHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccE
Q 001292 277 SILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNV 356 (1106)
Q Consensus 277 kiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~ 356 (1106)
......++|+|+.+............... ..++|+|++.|+.........................+..++.
T Consensus 81 ~~~~~~~~dii~~~~~~~~~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (375)
T cd03821 81 LRLNIREADIVHVHGLWSYPSLAAARAAR--------KYGIPYVVSPHGMLDPWALPHKALKKRLAWFLFERRLLQAAAA 152 (375)
T ss_pred HHHhCCCCCEEEEecccchHHHHHHHHHH--------HhCCCEEEEccccccccccccchhhhHHHHHHHHHHHHhcCCE
Confidence 22233679999987643322221111111 2578999999984221110110000000011112345678888
Q ss_pred EEecCCChhhh-hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHH
Q 001292 357 IVFPDYTLPML-YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMH 435 (1106)
Q Consensus 357 VIa~S~~~~~~-~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLe 435 (1106)
+++.+...... ....+..++.+||| |+|. +.+.+...... |..++...+.++++++|++.. .||++.+++
T Consensus 153 i~~~s~~~~~~~~~~~~~~~~~vi~~-~~~~---~~~~~~~~~~~-~~~~~~~~~~~~i~~~G~~~~----~K~~~~li~ 223 (375)
T cd03821 153 VHATSEQEAAEIRRLGLKAPIAVIPN-GVDI---PPFAALPSRGR-RRKFPILPDKRIILFLGRLHP----KKGLDLLIE 223 (375)
T ss_pred EEECCHHHHHHHHhhCCcccEEEcCC-CcCh---hccCcchhhhh-hhhccCCCCCcEEEEEeCcch----hcCHHHHHH
Confidence 88887544433 34456678999998 7987 55555433333 677788888999999999887 899999999
Q ss_pred HHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChh--hHHHHHHHcCeEEEccCCCCC
Q 001292 436 DVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNG--DVNGVLLMADIVLYGSSQVEQ 513 (1106)
Q Consensus 436 A~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~e--DL~~LyaaADVfV~PS~~EeE 513 (1106)
|+..+.++ +++++ ++++|.++..+...++.+++++++.+ +|.++|+.+ ++..+|+.||++++||..|
T Consensus 224 a~~~l~~~-------~~~~~-l~i~G~~~~~~~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~adv~v~ps~~e-- 292 (375)
T cd03821 224 AFAKLAER-------FPDWH-LVIAGPDEGGYRAELKQIAAALGLED-RVTFTGMLYGEDKAAALADADLFVLPSHSE-- 292 (375)
T ss_pred HHHHhhhh-------cCCeE-EEEECCCCcchHHHHHHHHHhcCccc-eEEEcCCCChHHHHHHHhhCCEEEeccccC--
Confidence 99887643 37887 68899887666677777778899987 999999764 8999999999999999986
Q ss_pred CCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH-H
Q 001292 514 GFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA-L 592 (1106)
Q Consensus 514 GFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fs-e 592 (1106)
+||++++||||||+|||+++.++..+++.+ .+|++++ .++++++++|.+++++++. ..++++++++.+.+.|+ +
T Consensus 293 ~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 293 NFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVD-DDVDALAAALRRALELPQR---LKAMGENGRALVEERFSWT 367 (375)
T ss_pred CCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeC-CChHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhcCHH
Confidence 999999999999999999999999999988 7888887 4569999999999999976 68899999999656555 5
Q ss_pred HHHHHHH
Q 001292 593 DCVTRYA 599 (1106)
Q Consensus 593 e~v~~Y~ 599 (1106)
..++.|.
T Consensus 368 ~~~~~~~ 374 (375)
T cd03821 368 AIAQQLL 374 (375)
T ss_pred HHHHHhh
Confidence 5555654
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-29 Score=306.40 Aligned_cols=370 Identities=14% Similarity=0.113 Sum_probs=268.4
Q ss_pred cccccCCCCCC-CCCCEEEEEeCCCCC----ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch-----------------
Q 001292 209 LDGLRSTPRFG-VRPPRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH----------------- 266 (1106)
Q Consensus 209 ~~ha~Sv~r~g-~r~~RIalVlg~L~~----gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~----------------- 266 (1106)
+.-.....+.+ .++++|++|...+.+ ||-.-++..|.++|++.|++|.|+.+..+...
T Consensus 467 ~~~~~~~~~~~~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~ 546 (977)
T PLN02939 467 VENFLKLTLSGTSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESY 546 (977)
T ss_pred HHHHHHhccCCCCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEe
Confidence 33334433333 557899999988766 89999999999999999999999887432110
Q ss_pred --------------------------H---HH-H-----------HH----hHHHHHhhc--cCccEEEEccccHHHHHH
Q 001292 267 --------------------------S---LW-E-----------QI----AGQISILGQ--EQYSLIDWSIFDGIIADS 299 (1106)
Q Consensus 267 --------------------------~---i~-r-----------~l----g~lvkiIr~--~~pDiIh~~~~~~i~v~~ 299 (1106)
. .+ + .+ .+...++.. .+||+||+|.|.+.++..
T Consensus 547 ~~g~~~~~~v~~~~~~GV~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~p 626 (977)
T PLN02939 547 FDGNLFKNKIWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAP 626 (977)
T ss_pred ecCceeEEEEEEEEECCeeEEEEecCCchhccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHH
Confidence 0 00 0 00 002233332 589999999999988744
Q ss_pred HHHHHhhhhcccCCCCCCcEEEEEcCCcccccchh--hh-----------hhhHH----hHHHHHHHHhccccEEEecCC
Q 001292 300 LEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPV--YV-----------ERGFQ----NLLSYWKSVFSRVNVIVFPDY 362 (1106)
Q Consensus 300 La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~--Y~-----------~~gle----klis~~~~~l~~AD~VIa~S~ 362 (1106)
+..+... .....++|+|+|+||......... .. ..+++ ..+...+..+..+|.|+++|.
T Consensus 627 ll~~~y~----~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSp 702 (977)
T PLN02939 627 LYWDLYA----PKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSP 702 (977)
T ss_pred HHHHHHh----hccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeH
Confidence 3332110 112367899999999543221110 00 00110 112333445667999999986
Q ss_pred Chhhh---h--------cCCCCCCEEEeCCCCCCcccccccCcch------------------hHHHHHHHcCCCC---C
Q 001292 363 TLPML---Y--------SVLDAGNFFVIPGSPADVWAVEAYSKSH------------------EKYQLRKENGFLK---D 410 (1106)
Q Consensus 363 ~~~~~---~--------~gi~~~KI~VIpN~GVDl~~~e~F~ps~------------------s~~~LR~~lGL~~---d 410 (1106)
..... . ......++.+|+| |||. +.|.|.. .+..+++++|+++ +
T Consensus 703 tYA~EI~te~G~GL~~~L~~~~~Kl~gIlN-GID~---e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d 778 (977)
T PLN02939 703 TYAQEVRSEGGRGLQDTLKFHSKKFVGILN-GIDT---DTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADAS 778 (977)
T ss_pred HHHHHHHHHhccchHHHhccccCCceEEec-ceeh---hhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCccccc
Confidence 65433 1 2345678999998 8998 5666542 2567899999974 5
Q ss_pred cEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCc-cHHHHHHHHHHcCCCCCcEEEcC
Q 001292 411 EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG-YNDALQEVASRLGLLEHSVRHYG 489 (1106)
Q Consensus 411 ~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gper-Y~eeLkeLaeklGL~d~rV~flG 489 (1106)
.++|++|||+.+ +||++.+++|+..+.. ++++ |+|+|+|++. |.+.++++++++++.+ +|.|+|
T Consensus 779 ~pLIg~VGRL~~----QKGiDlLleA~~~Ll~---------~dvq-LVIvGdGp~~~~e~eL~~La~~l~l~d-rV~FlG 843 (977)
T PLN02939 779 QPLVGCITRLVP----QKGVHLIRHAIYKTAE---------LGGQ-FVLLGSSPVPHIQREFEGIADQFQSNN-NIRLIL 843 (977)
T ss_pred ceEEEEeecCCc----ccChHHHHHHHHHHhh---------cCCE-EEEEeCCCcHHHHHHHHHHHHHcCCCC-eEEEEe
Confidence 689999999998 9999999999977652 3566 6889999752 3478889999999887 899999
Q ss_pred Chhh--HHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhcc---------CCeEEEEcCCCHHHH
Q 001292 490 FNGD--VNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE---------GAQVIFFQKDNPEGL 558 (1106)
Q Consensus 490 ~~eD--L~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~D---------g~nG~LV~~~D~eeL 558 (1106)
..++ ...+|+.||+||+||.+| +||++++|||+||+|||++++||+.++|.+ +.+|+++++.|+++|
T Consensus 844 ~~de~lah~IYAaADIFLmPSr~E--PfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaL 921 (977)
T PLN02939 844 KYDEALSHSIYAASDMFIIPSMFE--PCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGL 921 (977)
T ss_pred ccCHHHHHHHHHhCCEEEECCCcc--CCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHH
Confidence 6544 468999999999999997 999999999999999999999999999865 579999999999999
Q ss_pred HHHHHHHHh----CcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC
Q 001292 559 SRAFSLFIS----NGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNF 608 (1106)
Q Consensus 559 AeAI~~LLs----DpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk~ 608 (1106)
+++|.++++ |++. ..+|+.++. ...+.|..++.+|.++|+.++..
T Consensus 922 a~AL~rAL~~~~~dpe~---~~~L~~~am--~~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 922 NSALERAFNYYKRKPEV---WKQLVQKDM--NIDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred HHHHHHHHHHhccCHHH---HHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHh
Confidence 999998875 6776 577777664 35566777788999999998764
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-29 Score=282.09 Aligned_cols=339 Identities=17% Similarity=0.170 Sum_probs=243.8
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCc-------h--------------HHHHH-------HhH
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS-------H--------------SLWEQ-------IAG 274 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~-------~--------------~i~r~-------lg~ 274 (1106)
+|||++++++..||.+..+..|+++|.++||+|+|+|..++.. . ..... +..
T Consensus 1 mkIl~~~~~~~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 80 (392)
T cd03805 1 LRVAFIHPDLGIGGAERLVVDAALALQSRGHEVTIYTSHHDPSHCFEETKDGTLPVRVRGDWLPRSIFGRFHILCAYLRM 80 (392)
T ss_pred CeEEEECCCCCCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchhcchhccCCeeEEEEEeEEEcchhhHhHHHHHHHHHH
Confidence 5899999999999999999999999999999999998643210 0 00000 000
Q ss_pred HH-----HHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcc--cccchhhhhhhH-HhHHHH
Q 001292 275 QI-----SILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSL--ANRLPVYVERGF-QNLLSY 346 (1106)
Q Consensus 275 lv-----kiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~L--s~r~~~Y~~~gl-eklis~ 346 (1106)
.. ..+...++|+||.+.....+. .+ . .. .+.|+|+++|.... ..+.. ....+ ......
T Consensus 81 ~~~~~~~~~~~~~~~Dvi~~~~~~~~~~-~~-~-~~---------~~~~~i~~~h~~~~~~~~~~~--~~~~~~~~~~~~ 146 (392)
T cd03805 81 LYLALYLLLLPDEKYDVFIVDQVSACVP-LL-K-LF---------SPSKILFYCHFPDQLLAQRGS--LLKRLYRKPFDW 146 (392)
T ss_pred HHHHHHHHhcccCCCCEEEEcCcchHHH-HH-H-Hh---------cCCcEEEEEecChHHhcCCCc--HHHHHHHHHHHH
Confidence 00 134557899999876543322 11 1 11 23799999885211 11100 00000 111111
Q ss_pred H-HHHhccccEEEecCCChhhh----hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccC
Q 001292 347 W-KSVFSRVNVIVFPDYTLPML----YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSF 421 (1106)
Q Consensus 347 ~-~~~l~~AD~VIa~S~~~~~~----~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~ 421 (1106)
+ ...++.+|.|++.+...... +......++.+|+| |+|. +.|.+..... .+......++.++++++||+.
T Consensus 147 ~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n-~vd~---~~~~~~~~~~-~~~~~~~~~~~~~i~~~grl~ 221 (392)
T cd03805 147 LEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYP-CVDT---DSFESTSEDP-DPGLLIPKSGKKTFLSINRFE 221 (392)
T ss_pred HHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCC-CcCH---HHcCcccccc-cccccccCCCceEEEEEeeec
Confidence 1 23578899999998766554 12233334458887 7987 5565432221 233345567888999999988
Q ss_pred ccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCc------cHHHHHHHHHH-cCCCCCcEEEcCCh--h
Q 001292 422 FYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG------YNDALQEVASR-LGLLEHSVRHYGFN--G 492 (1106)
Q Consensus 422 ~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gper------Y~eeLkeLaek-lGL~d~rV~flG~~--e 492 (1106)
+ .||++.+++|+.++.++.. ..|+++ |+++|.++.+ |.+++++++++ +++.+ +|.|+|+. +
T Consensus 222 ~----~Kg~~~ll~a~~~l~~~~~----~~~~~~-l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~-~V~f~g~~~~~ 291 (392)
T cd03805 222 R----KKNIALAIEAFAILKDKLA----EFKNVR-LVIAGGYDPRVAENVEYLEELQRLAEELLLLED-QVIFLPSISDS 291 (392)
T ss_pred c----cCChHHHHHHHHHHHhhcc----cccCeE-EEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCc-eEEEeCCCChH
Confidence 8 8999999999988764220 126787 6888887652 45788999998 89987 99999965 5
Q ss_pred hHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccH
Q 001292 493 DVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLS 572 (1106)
Q Consensus 493 DL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelR 572 (1106)
++..+|+.||++++||..| +||++++||||||+|||+++.++..|++.++.+|++++. |+++++++|..++++++.
T Consensus 292 ~~~~~l~~ad~~l~~s~~E--~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~- 367 (392)
T cd03805 292 QKELLLSSARALLYTPSNE--HFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDL- 367 (392)
T ss_pred HHHHHHhhCeEEEECCCcC--CCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChHH-
Confidence 6789999999999999886 999999999999999999999999999999999999975 899999999999999987
Q ss_pred HHHHHHHHHHHHHHHHhcHHHHHH
Q 001292 573 KFARTVASAGRLHAKNMLALDCVT 596 (1106)
Q Consensus 573 k~r~~mGe~Are~ake~fsee~v~ 596 (1106)
..+|+++|++.+.+.|+.+.+.
T Consensus 368 --~~~~~~~a~~~~~~~~s~~~~~ 389 (392)
T cd03805 368 --ADRMGAAGRKRVKEKFSTEAFA 389 (392)
T ss_pred --HHHHHHHHHHHHHHhcCHHHHh
Confidence 6889999999998877665543
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=297.59 Aligned_cols=338 Identities=13% Similarity=0.147 Sum_probs=244.6
Q ss_pred EEEEEeCCCCCChhHHHHHHHH----HHHHHCCC--------EEEEEEc--CCCCchHH---------------------
Q 001292 224 RIGLILGNMAKDSRSLLLITVV----KNLQKLGY--------VFKIYAV--RSGNSHSL--------------------- 268 (1106)
Q Consensus 224 RIalVlg~L~~gGesl~vv~La----kaLqe~Gy--------eVtV~t~--~dg~~~~i--------------------- 268 (1106)
++|++.++++.+|.+.+++.++ +.+++.|- +|.++|- .++...+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (578)
T PRK15490 163 RLALCTGSLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGN 242 (578)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchh
Confidence 4899999999999999888544 44444433 5666654 22211000
Q ss_pred -----------HH------------HHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEE-Ec
Q 001292 269 -----------WE------------QIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWI-IQ 324 (1106)
Q Consensus 269 -----------~r------------~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~t-IH 324 (1106)
++ .+..+..+++..++|+||.+.....++..+..+. .++|+|++ .|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ir~~rpDIVHt~~~~a~l~g~laA~l----------agvpviv~~~h 312 (578)
T PRK15490 243 LFDDATIESPELRLLLSHLPPVCKYGIKHLVPHLCERKLDYLSVWQDGACLMIALAALI----------AGVPRIQLGLR 312 (578)
T ss_pred hhhhccccchHHHHHHhcCChHHHHHHHHHHHHHHHcCCCEEEEcCcccHHHHHHHHHh----------cCCCEEEEeec
Confidence 00 1122678889999999999998887787777754 57898755 55
Q ss_pred CCcccccchhhhhhhHHhHHHHHHH-----H-hccccEEEecCCChhhh---hcCCCCCCEEEeCCCCCCcccccccCcc
Q 001292 325 EDSLANRLPVYVERGFQNLLSYWKS-----V-FSRVNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKS 395 (1106)
Q Consensus 325 na~Ls~r~~~Y~~~gleklis~~~~-----~-l~~AD~VIa~S~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~ps 395 (1106)
+. ...... ..+...|.. . +..+| ++..+...... +.+++++++.+||| |+|. ..|.+.
T Consensus 313 ~~--~~~~~~------r~~~~e~~~~~~a~~i~~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyN-GVD~---~rf~p~ 379 (578)
T PRK15490 313 GL--PPVVRK------RLFKPEYEPLYQALAVVPGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYN-GVLP---PSTEPS 379 (578)
T ss_pred cc--CCcchh------hHHHHHHHHhhhhceeEecch-hhhccHHHHHHHHHHhCCCHHHEEEEeC-Ccch---hhcCcc
Confidence 41 110000 111111111 1 22222 23333222221 34788999999998 8998 566664
Q ss_pred hhH-HHHHH--HcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHH
Q 001292 396 HEK-YQLRK--ENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQ 472 (1106)
Q Consensus 396 ~s~-~~LR~--~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLk 472 (1106)
... ...+. ..+++++.++|+++||+.. .|++..+++++..+.+. .|+++ |+|+|+|+.+ ++++
T Consensus 380 ~~~~~~~r~~~~~~l~~~~~vIg~VgRl~~----~Kg~~~LI~A~a~llk~-------~pdir-LvIVGdG~~~--eeLk 445 (578)
T PRK15490 380 SEVPHKIWQQFTQKTQDADTTIGGVFRFVG----DKNPFAWIDFAARYLQH-------HPATR-FVLVGDGDLR--AEAQ 445 (578)
T ss_pred chhhHHHHHHhhhccCCCCcEEEEEEEEeh----hcCHHHHHHHHHHHHhH-------CCCeE-EEEEeCchhH--HHHH
Confidence 211 12333 2345567789999999887 99999999999877643 27888 6889999875 8999
Q ss_pred HHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcC
Q 001292 473 EVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQK 552 (1106)
Q Consensus 473 eLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~ 552 (1106)
++++++|+.+ +|+|+|+.+|+..+|+.+|++|+||.+| +||++++||||||+|||+++.+|++|+|.++.+|+++++
T Consensus 446 ~la~elgL~d-~V~FlG~~~Dv~~~LaaADVfVlPS~~E--Gfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~ 522 (578)
T PRK15490 446 KRAEQLGILE-RILFVGASRDVGYWLQKMNVFILFSRYE--GLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDD 522 (578)
T ss_pred HHHHHcCCCC-cEEECCChhhHHHHHHhCCEEEEccccc--CccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECC
Confidence 9999999987 9999999999999999999999999987 999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHH---HHHhCcccHHHHHHHHHHHHHHHHHhcHHH-HHHHHHHHHHH
Q 001292 553 DNPEGLSRAFS---LFISNGKLSKFARTVASAGRLHAKNMLALD-CVTRYARILEN 604 (1106)
Q Consensus 553 ~D~eeLAeAI~---~LLsDpelRk~r~~mGe~Are~ake~fsee-~v~~Y~eLyes 604 (1106)
.|++++++++. .+.++.+. ...|+++|++.++++|+.+ ++.+|.++|.+
T Consensus 523 ~D~~aLa~ai~lA~aL~~ll~~---~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 523 AQTVNLDQACRYAEKLVNLWRS---RTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred CChhhHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 99999888873 34443332 4578999999998877755 55599999986
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-29 Score=281.57 Aligned_cols=326 Identities=12% Similarity=0.118 Sum_probs=237.5
Q ss_pred CEEEEEeCCCC-CChhHHHHHHHHHHHHHC--CCEEEEEEcCCCCchHHH--------------------HHHhHHHHHh
Q 001292 223 PRIGLILGNMA-KDSRSLLLITVVKNLQKL--GYVFKIYAVRSGNSHSLW--------------------EQIAGQISIL 279 (1106)
Q Consensus 223 ~RIalVlg~L~-~gGesl~vv~LakaLqe~--GyeVtV~t~~dg~~~~i~--------------------r~lg~lvkiI 279 (1106)
+||+++...+. .||.+..+..+++.|.+. |++|.+++.......... .....+.+++
T Consensus 1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 80 (359)
T PRK09922 1 MKIAFIGEAVSGFGGMETVISNVINTFEESKINCEMFFFCRNDKMDKAWLKEIKYAQSFSNIKLSFLRRAKHVYNFSKWL 80 (359)
T ss_pred CeeEEecccccCCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChHHHHhcchhcccccchhhhhcccHHHHHHHHHH
Confidence 58999988775 499999999999999999 899998887543211000 0112245678
Q ss_pred hccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEe
Q 001292 280 GQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVF 359 (1106)
Q Consensus 280 r~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa 359 (1106)
+..++|+||++.....++..+..+.. ....+++.+.|...... ..+ . + ..+..+|.+++
T Consensus 81 ~~~~~Dii~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~h~~~~~~-~~~-------~----~-~~~~~~d~~i~ 139 (359)
T PRK09922 81 KETQPDIVICIDVISCLYANKARKKS--------GKQFKIFSWPHFSLDHK-KHA-------E----C-KKITCADYHLA 139 (359)
T ss_pred HhcCCCEEEEcCHHHHHHHHHHHHHh--------CCCCeEEEEecCccccc-chh-------h----h-hhhhcCCEEEE
Confidence 88999999999876666555555432 13345666667532111 000 0 1 11368999999
Q ss_pred cCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHH
Q 001292 360 PDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDV 437 (1106)
Q Consensus 360 ~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~ 437 (1106)
.|...... ..+++.+++.+||| |+|. +.+.... ....+.++++++||+.. +++|+++.+++|+
T Consensus 140 ~S~~~~~~~~~~~~~~~ki~vi~N-~id~---~~~~~~~---------~~~~~~~~i~~~Grl~~--~~~k~~~~l~~a~ 204 (359)
T PRK09922 140 ISSGIKEQMMARGISAQRISVIYN-PVEI---KTIIIPP---------PERDKPAVFLYVGRLKF--EGQKNVKELFDGL 204 (359)
T ss_pred cCHHHHHHHHHcCCCHHHEEEEcC-CCCH---HHccCCC---------cccCCCcEEEEEEEEec--ccCcCHHHHHHHH
Confidence 88765544 44667778999998 7885 2322110 01134678999999864 2378999999999
Q ss_pred HHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh----hhHHHHHHHcCeEEEccCCCCC
Q 001292 438 GPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN----GDVNGVLLMADIVLYGSSQVEQ 513 (1106)
Q Consensus 438 k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~----eDL~~LyaaADVfV~PS~~EeE 513 (1106)
..+. ++++ ++++|+|++. +.++++++++++.+ +|+|+|+. +++..+|+.||++|+||..|
T Consensus 205 ~~~~----------~~~~-l~ivG~g~~~--~~l~~~~~~~~l~~-~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~E-- 268 (359)
T PRK09922 205 SQTT----------GEWQ-LHIIGDGSDF--EKCKAYSRELGIEQ-RIIWHGWQSQPWEVVQQKIKNVSALLLTSKFE-- 268 (359)
T ss_pred HhhC----------CCeE-EEEEeCCccH--HHHHHHHHHcCCCC-eEEEecccCCcHHHHHHHHhcCcEEEECCccc--
Confidence 6552 3567 6889999976 89999999999987 99999965 45788899999999999986
Q ss_pred CCcHHHHHHHHhCCCEEecC-CCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHH
Q 001292 514 GFPSLIVRAMTFGIPVITPD-FPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLAL 592 (1106)
Q Consensus 514 GFGlvLLEAMA~G~PVIASD-~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fse 592 (1106)
|||++++||||||+|||+++ .+|..|+|.++.+|++++++|+++++++|..+++|++.+ ....+.++++++.++.|..
T Consensus 269 gf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~ 347 (359)
T PRK09922 269 GFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVKY-QHDAIPNSIERFYEVLYFK 347 (359)
T ss_pred CcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcccC-CHHHHHHHHHHhhHHHHHH
Confidence 99999999999999999999 899999999999999999999999999999999999853 1344455555544444433
Q ss_pred HHHHHHHHHHHHH
Q 001292 593 DCVTRYARILENV 605 (1106)
Q Consensus 593 e~v~~Y~eLyesl 605 (1106)
++.++|+.+
T Consensus 348 ----~~~~~~~~~ 356 (359)
T PRK09922 348 ----NLNNALFSK 356 (359)
T ss_pred ----HHHHHHHHH
Confidence 555555544
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-28 Score=280.56 Aligned_cols=316 Identities=17% Similarity=0.219 Sum_probs=235.4
Q ss_pred CCChhHHHHHHHHHHHHHCCCEEEEEEcCCCC-c-h----------------------HHHH------HHhHHHHHh---
Q 001292 233 AKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN-S-H----------------------SLWE------QIAGQISIL--- 279 (1106)
Q Consensus 233 ~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~-~-~----------------------~i~r------~lg~lvkiI--- 279 (1106)
..||.+..+..+++.|.. +|+++|...-+ . . ..|. ....+..++
T Consensus 19 ~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (380)
T PRK15484 19 GAAAVETWIYQVAKRTSI---PNRIACIKNPGYPEYTKVNDNCDIHYIGFSRIYKRLFQKWTRLDPLPYSQRILNIAHKF 95 (380)
T ss_pred cccHHHHHHHHhhhhccC---CeeEEEecCCCCCchhhccCCCceEEEEeccccchhhhhhhccCchhHHHHHHHHHHhc
Confidence 348999999999999944 88888874321 0 0 0000 001122222
Q ss_pred hccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEe
Q 001292 280 GQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVF 359 (1106)
Q Consensus 280 r~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa 359 (1106)
+...+++||+|+... +...+..+ ..+.|+|++.|+.. . . ..+..++.+++
T Consensus 96 ~~~~~~vi~v~~~~~-~~~~~~~~----------~~~~~~v~~~h~~~--------~----~-------~~~~~~~~ii~ 145 (380)
T PRK15484 96 TITKDSVIVIHNSMK-LYRQIRER----------APQAKLVMHMHNAF--------E----P-------ELLDKNAKIIV 145 (380)
T ss_pred CCCCCcEEEEeCcHH-hHHHHHhh----------CCCCCEEEEEeccc--------C----h-------hHhccCCEEEE
Confidence 224588999988554 33333332 25679999999851 0 0 12346788899
Q ss_pred cCCChhhh-hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHH
Q 001292 360 PDYTLPML-YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVG 438 (1106)
Q Consensus 360 ~S~~~~~~-~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k 438 (1106)
+|...... ....+..++.+||| |+|. +.|.+.. ...+++.++++++.++|+++||+.+ .||++.+++|+.
T Consensus 146 ~S~~~~~~~~~~~~~~~i~vIpn-gvd~---~~~~~~~-~~~~~~~~~~~~~~~~il~~Grl~~----~Kg~~~Li~A~~ 216 (380)
T PRK15484 146 PSQFLKKFYEERLPNADISIVPN-GFCL---ETYQSNP-QPNLRQQLNISPDETVLLYAGRISP----DKGILLLMQAFE 216 (380)
T ss_pred cCHHHHHHHHhhCCCCCEEEecC-CCCH---HHcCCcc-hHHHHHHhCCCCCCeEEEEeccCcc----ccCHHHHHHHHH
Confidence 88776655 33456678999998 7997 5665532 3456778898888899999999988 899999999998
Q ss_pred HhHHHHHhhccCCCCeEEEEEEcCCCCc-------cHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccC
Q 001292 439 PLLIKYARRNSVEGSFKFVFLCGNSTDG-------YNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSS 509 (1106)
Q Consensus 439 ~Ll~k~aklk~~~PdikfLIIVG~Gper-------Y~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~ 509 (1106)
.+.++ .|+++ |+|+|+++.. |.+.+++++++++ + +|.|+|.. +++..+|+.||++|+||.
T Consensus 217 ~l~~~-------~p~~~-lvivG~g~~~~~~~~~~~~~~l~~~~~~l~--~-~v~~~G~~~~~~l~~~~~~aDv~v~pS~ 285 (380)
T PRK15484 217 KLATA-------HSNLK-LVVVGDPTASSKGEKAAYQKKVLEAAKRIG--D-RCIMLGGQPPEKMHNYYPLADLVVVPSQ 285 (380)
T ss_pred HHHHh-------CCCeE-EEEEeCCccccccchhHHHHHHHHHHHhcC--C-cEEEeCCCCHHHHHHHHHhCCEEEeCCC
Confidence 87643 38888 6888887531 3446666776655 4 79999964 689999999999999998
Q ss_pred CCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEE-EEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH
Q 001292 510 QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVI-FFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKN 588 (1106)
Q Consensus 510 ~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~-LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake 588 (1106)
++ |+||++++||||||+|||+++.||++|++.++.+|+ ++++.|+++|+++|.++++|+++ .+|++++++.+.+
T Consensus 286 ~~-E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~----~~~~~~ar~~~~~ 360 (380)
T PRK15484 286 VE-EAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL----TQIAEQAKDFVFS 360 (380)
T ss_pred Cc-cccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHH----HHHHHHHHHHHHH
Confidence 63 599999999999999999999999999999999998 56789999999999999999974 5799999988766
Q ss_pred hcH-HHHHHHHHHHHHHHh
Q 001292 589 MLA-LDCVTRYARILENVL 606 (1106)
Q Consensus 589 ~fs-ee~v~~Y~eLyeslL 606 (1106)
.|+ +.++.+|+++|++..
T Consensus 361 ~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 361 KYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred hCCHHHHHHHHHHHHHHhc
Confidence 655 566669999998753
|
|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-28 Score=268.99 Aligned_cols=337 Identities=17% Similarity=0.195 Sum_probs=248.9
Q ss_pred EEEEEeCCCCC--ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch---------------------HHHHHHhHHHHHhh
Q 001292 224 RIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH---------------------SLWEQIAGQISILG 280 (1106)
Q Consensus 224 RIalVlg~L~~--gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~---------------------~i~r~lg~lvkiIr 280 (1106)
||++|.+...+ +|.+..+..++++|.+.||+|++++....... ........+...++
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPARVVPVPSVPLPGYPEIRLALPPRRRVRRLLD 80 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCCCceeecccccCcccceEecccchhhHHHHHH
Confidence 57888877755 78899999999999999999999987542200 00001112455566
Q ss_pred ccCccEEEEccccHHH-HHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhH-HHHHHHHhccccEEE
Q 001292 281 QEQYSLIDWSIFDGII-ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNL-LSYWKSVFSRVNVIV 358 (1106)
Q Consensus 281 ~~~pDiIh~~~~~~i~-v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~glekl-is~~~~~l~~AD~VI 358 (1106)
..++|+||++...... ......+ ..++|+++++|+... .....+......+. .......++.+|.++
T Consensus 81 ~~~pdii~~~~~~~~~~~~~~~~~----------~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~ 149 (364)
T cd03814 81 AFAPDVVHIATPGPLGLAALRAAR----------RLGIPVVTSYHTDFP-EYLRYYGLGPLSWLAWAYLRWFHNRADRVL 149 (364)
T ss_pred hcCCCEEEEeccchhhHHHHHHHH----------HcCCCEEEEEecChH-HHhhhcccchHhHhhHHHHHHHHHhCCEEE
Confidence 7899999987544322 2222221 267999999998421 11110000011111 122234567899999
Q ss_pred ecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHH
Q 001292 359 FPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVG 438 (1106)
Q Consensus 359 a~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k 438 (1106)
+++.............++.++++ |+|. +.|.+.......+..++ ..+.++++++|++.. .|+.+.++++++
T Consensus 150 ~~s~~~~~~~~~~~~~~~~~~~~-g~~~---~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~----~k~~~~~i~~~~ 220 (364)
T cd03814 150 VPSPSLADELRARGFRRVRLWPR-GVDT---ELFHPRRRDEALRARLG-PPDRPVLLYVGRLAP----EKNLEALLDADL 220 (364)
T ss_pred eCCHHHHHHHhccCCCceeecCC-Cccc---cccCcccccHHHHHHhC-CCCCeEEEEEecccc----ccCHHHHHHHHH
Confidence 99977766544444567888887 7887 55655433344455565 456789999998876 889999999998
Q ss_pred HhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCc
Q 001292 439 PLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFP 516 (1106)
Q Consensus 439 ~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFG 516 (1106)
.+.. . ++++ ++++|.++.. +.++ +..+ +|.+.| +.+++..+|+.||++++||..| +||
T Consensus 221 ~l~~-------~-~~~~-l~i~G~~~~~--~~~~------~~~~-~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e--~~~ 280 (364)
T cd03814 221 PLRR-------R-PPVR-LVIVGDGPAR--ARLE------ARYP-NVHFLGFLDGEELAAAYASADVFVFPSRTE--TFG 280 (364)
T ss_pred Hhhh-------c-CCce-EEEEeCCchH--HHHh------ccCC-cEEEEeccCHHHHHHHHHhCCEEEECcccc--cCC
Confidence 7752 2 5677 6889988864 4444 3444 899999 5688999999999999999986 999
Q ss_pred HHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHH
Q 001292 517 SLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVT 596 (1106)
Q Consensus 517 lvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~ 596 (1106)
++++||||||+|||+++.++..+++.++.+|+++++.|+++++++|.++++|++. +.+|++++++.+.++.|++.++
T Consensus 281 ~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 357 (364)
T cd03814 281 LVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPEL---RRRMAARARAEAERRSWEAFLD 357 (364)
T ss_pred cHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHhhcCHHHHHH
Confidence 9999999999999999999999999998999999999999999999999999987 6889999999998878888888
Q ss_pred HHHHHHH
Q 001292 597 RYARILE 603 (1106)
Q Consensus 597 ~Y~eLye 603 (1106)
.+.++|+
T Consensus 358 ~~~~~~~ 364 (364)
T cd03814 358 NLLEAYR 364 (364)
T ss_pred HHHHhhC
Confidence 9888773
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-28 Score=262.11 Aligned_cols=322 Identities=17% Similarity=0.275 Sum_probs=248.2
Q ss_pred EEEEEeCCCC-CChhHHHHHHHHHHHHHCCCEEEEEEcCCCC-c-hH--------------------HHHHHhHHHHHhh
Q 001292 224 RIGLILGNMA-KDSRSLLLITVVKNLQKLGYVFKIYAVRSGN-S-HS--------------------LWEQIAGQISILG 280 (1106)
Q Consensus 224 RIalVlg~L~-~gGesl~vv~LakaLqe~GyeVtV~t~~dg~-~-~~--------------------i~r~lg~lvkiIr 280 (1106)
||++++..+. .||.+..+..++++|.+.||+|++++..+.. . .. .+.....+..+++
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEKGHEVTIISLDKGEPPFYELDPKIKVIDLGDKRDSKLLARFKKLRRLRKLLK 80 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhCCCeEEEEecCCCCCCccccCCccceeecccccccchhccccchHHHHHhhc
Confidence 5899999998 7999999999999999999999999885542 0 00 1111222566777
Q ss_pred ccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCC-CcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEe
Q 001292 281 QEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHS-IPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVF 359 (1106)
Q Consensus 281 ~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~g-IPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa 359 (1106)
..++|+|+.+... ....+.... .+ +|+|.+.|+......... . ........++.+|.+++
T Consensus 81 ~~~~d~i~~~~~~--~~~~~~~~~----------~~~~~~i~~~~~~~~~~~~~~------~-~~~~~~~~~~~~d~ii~ 141 (348)
T cd03820 81 NNKPDVVISFLTS--LLTFLASLG----------LKIVKLIVSEHNSPDAYKKRL------R-RLLLRRLLYRRADAVVV 141 (348)
T ss_pred ccCCCEEEEcCch--HHHHHHHHh----------hccccEEEecCCCccchhhhh------H-HHHHHHHHHhcCCEEEE
Confidence 7899999998766 222222211 23 599999898632211111 0 01113456789999999
Q ss_pred cCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHH
Q 001292 360 PDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGP 439 (1106)
Q Consensus 360 ~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~ 439 (1106)
.+..........+..++.++|| +++. ..+.+. ...+.++++++|++.. .||.+.++++++.
T Consensus 142 ~s~~~~~~~~~~~~~~~~vi~~-~~~~---~~~~~~-----------~~~~~~~i~~~g~~~~----~K~~~~l~~~~~~ 202 (348)
T cd03820 142 LTEEDRALYYKKFNKNVVVIPN-PLPF---PPEEPS-----------SDLKSKRILAVGRLVP----QKGFDLLIEAWAK 202 (348)
T ss_pred eCHHHHHHhhccCCCCeEEecC-CcCh---hhcccc-----------CCCCCcEEEEEEeecc----ccCHHHHHHHHHH
Confidence 9977654445566778999998 6876 222211 2346779999999887 8999999999987
Q ss_pred hHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHH
Q 001292 440 LLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLI 519 (1106)
Q Consensus 440 Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvL 519 (1106)
+.+ ..|+++ ++|+|.++.. +.++++++++++.+ +|.+.|..+++..+|+.||++++||..| +||+++
T Consensus 203 l~~-------~~~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~i~ps~~e--~~~~~~ 269 (348)
T cd03820 203 IAK-------KHPDWK-LRIVGDGPER--EALEALIKELGLED-RVILLGFTKNIEEYYAKASIFVLTSRFE--GFPMVL 269 (348)
T ss_pred HHh-------cCCCeE-EEEEeCCCCH--HHHHHHHHHcCCCC-eEEEcCCcchHHHHHHhCCEEEeCcccc--ccCHHH
Confidence 753 237887 6889998865 88888999999987 9999999899999999999999999986 999999
Q ss_pred HHHHHhCCCEEecCCCC-chhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHH
Q 001292 520 VRAMTFGIPVITPDFPI-IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRY 598 (1106)
Q Consensus 520 LEAMA~G~PVIASD~gG-I~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y 598 (1106)
+|||++|+|||+++.++ ..+++.++.+|++++..|+++++++|.++++|++. +++|++++++.++++.|++.+.+|
T Consensus 270 ~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 346 (348)
T cd03820 270 LEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEEL---RKRMGANARESAERFSIENIIKQW 346 (348)
T ss_pred HHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHHHhCHHHHHHHh
Confidence 99999999999999754 56777777799999999999999999999999998 688999998888888888877776
Q ss_pred H
Q 001292 599 A 599 (1106)
Q Consensus 599 ~ 599 (1106)
.
T Consensus 347 ~ 347 (348)
T cd03820 347 E 347 (348)
T ss_pred c
Confidence 4
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-28 Score=287.97 Aligned_cols=351 Identities=16% Similarity=0.144 Sum_probs=250.7
Q ss_pred EEEEEeCCCCC----ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchH--------------------------------
Q 001292 224 RIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS-------------------------------- 267 (1106)
Q Consensus 224 RIalVlg~L~~----gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~-------------------------------- 267 (1106)
+|++|+.++.+ ||....+..|.++|+++|++|.|+++..+....
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 58888887654 999999999999999999999999863221100
Q ss_pred ---------H-------------------HH--HH-hHHHHHhhc--cCccEEEEccccHHHHHHHHHHHhhhhcccCCC
Q 001292 268 ---------L-------------------WE--QI-AGQISILGQ--EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPF 314 (1106)
Q Consensus 268 ---------i-------------------~r--~l-g~lvkiIr~--~~pDiIh~~~~~~i~v~~La~k~~idII~te~~ 314 (1106)
. .+ .+ .....++.. .+||+||+|.+.+.++..+...... ....
T Consensus 81 v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~----~~~~ 156 (476)
T cd03791 81 VPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYA----DPFF 156 (476)
T ss_pred ceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhc----cccC
Confidence 0 00 00 012334443 7899999999998777766654321 0113
Q ss_pred CCCcEEEEEcCCcccccchhhhhhh---------------HHhHHHHHHHHhccccEEEecCCChhhhhc----------
Q 001292 315 HSIPLVWIIQEDSLANRLPVYVERG---------------FQNLLSYWKSVFSRVNVIVFPDYTLPMLYS---------- 369 (1106)
Q Consensus 315 ~gIPVI~tIHna~Ls~r~~~Y~~~g---------------leklis~~~~~l~~AD~VIa~S~~~~~~~~---------- 369 (1106)
.++|+|+|+|+.........+.... ........+..+..+|.|+++|........
T Consensus 157 ~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~ 236 (476)
T cd03791 157 KNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDG 236 (476)
T ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHH
Confidence 5899999999953222111100000 000112223457789999999866544311
Q ss_pred --CCCCCCEEEeCCCCCCcccccccCcch------------------hHHHHHHHcCCC--CCcEEEEEEcccCcccccc
Q 001292 370 --VLDAGNFFVIPGSPADVWAVEAYSKSH------------------EKYQLRKENGFL--KDEIVVVVVGSSFFYNELS 427 (1106)
Q Consensus 370 --gi~~~KI~VIpN~GVDl~~~e~F~ps~------------------s~~~LR~~lGL~--~d~~VIL~VGRl~~y~kg~ 427 (1106)
.....++.+|+| |+|. +.|.+.. .+..+++++|++ ++.++|+++||+.. +
T Consensus 237 ~~~~~~~ki~~I~N-Gid~---~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~----~ 308 (476)
T cd03791 237 LLRARAGKLSGILN-GIDY---DVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTE----Q 308 (476)
T ss_pred HHHhccCCeEEEeC-CCcC---cccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccc----c
Confidence 123578999998 8997 5555431 245678889985 78899999999988 8
Q ss_pred CCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEc-CCh-hhHHHHHHHcCeEE
Q 001292 428 WDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY-GFN-GDVNGVLLMADIVL 505 (1106)
Q Consensus 428 Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~fl-G~~-eDL~~LyaaADVfV 505 (1106)
||++.+++|+..+.+ .+++ ++++|.|+..+.+.++++++++ .+ +|.+. |.. +.+..+|+.||+++
T Consensus 309 Kg~~~li~a~~~l~~---------~~~~-lvi~G~g~~~~~~~~~~~~~~~--~~-~v~~~~~~~~~~~~~~~~~aDv~l 375 (476)
T cd03791 309 KGIDLLLEALPELLE---------LGGQ-LVILGSGDPEYEEALRELAARY--PG-RVAVLIGYDEALAHLIYAGADFFL 375 (476)
T ss_pred ccHHHHHHHHHHHHH---------cCcE-EEEEecCCHHHHHHHHHHHHhC--CC-cEEEEEeCCHHHHHHHHHhCCEEE
Confidence 999999999987763 2356 6888998765567788887765 33 66654 544 44678999999999
Q ss_pred EccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCC------eEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHH
Q 001292 506 YGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGA------QVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVA 579 (1106)
Q Consensus 506 ~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~------nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mG 579 (1106)
+||.+| +||++++|||+||+|||+++.||+.|+|.++. +|+++++.|+++|+++|.++++.....+...+++
T Consensus 376 ~pS~~E--~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~ 453 (476)
T cd03791 376 MPSRFE--PCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQ 453 (476)
T ss_pred CCCCCC--CCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 999987 99999999999999999999999999999987 9999999999999999999886433222356777
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHH
Q 001292 580 SAGRLHAKNMLALDCVTRYARILE 603 (1106)
Q Consensus 580 e~Are~ake~fsee~v~~Y~eLye 603 (1106)
+++.+ ..+.|+.++++|.++|+
T Consensus 454 ~~~~~--~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 454 RNAMA--QDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHhc--cCCChHHHHHHHHHHHh
Confidence 77654 34566777789999986
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-28 Score=275.17 Aligned_cols=335 Identities=18% Similarity=0.225 Sum_probs=243.7
Q ss_pred CCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch----H----------------------HH----HHHhHHHHHhhcc
Q 001292 233 AKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH----S----------------------LW----EQIAGQISILGQE 282 (1106)
Q Consensus 233 ~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~----~----------------------i~----r~lg~lvkiIr~~ 282 (1106)
..||.+..+..+++.|.+.||+|+|++....... . .+ .....+...++..
T Consensus 19 ~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (398)
T cd03800 19 DTGGQNVYVLELARALARLGHEVDIFTRRIDDALPPIVELAPGVRVVRVPAGPAEYLPKEELWPYLDEFADDLLRFLRRE 98 (398)
T ss_pred CCCceeehHHHHHHHHhccCceEEEEEecCCcccCCccccccceEEEecccccccCCChhhcchhHHHHHHHHHHHHHhc
Confidence 3589999999999999999999999986321100 0 00 0111134445555
Q ss_pred --CccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhh--hHHhHHHHHHHHhccccEEE
Q 001292 283 --QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVER--GFQNLLSYWKSVFSRVNVIV 358 (1106)
Q Consensus 283 --~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~--gleklis~~~~~l~~AD~VI 358 (1106)
++|+||.+.+...++.....+. .++|+|+++|+............. ............++.+|.++
T Consensus 99 ~~~~Div~~~~~~~~~~~~~~~~~----------~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii 168 (398)
T cd03800 99 GGRPDLIHAHYWDSGLVALLLARR----------LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVI 168 (398)
T ss_pred CCCccEEEEecCccchHHHHHHhh----------cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEE
Confidence 8999999876665555444432 578999999984321111000000 00111111234678999999
Q ss_pred ecCCChhhh---hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHH
Q 001292 359 FPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMH 435 (1106)
Q Consensus 359 a~S~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLe 435 (1106)
+++...... ....+..++.+||| |+|. +.+.+.......+..++.++++++|+++||+.. .||++.+++
T Consensus 169 ~~s~~~~~~~~~~~~~~~~~~~vi~n-g~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~gr~~~----~k~~~~ll~ 240 (398)
T cd03800 169 ASTPQEAEELYSLYGAYPRRIRVVPP-GVDL---ERFTPYGRAEARRARLLRDPDKPRILAVGRLDP----RKGIDTLIR 240 (398)
T ss_pred EcCHHHHHHHHHHccccccccEEECC-CCCc---cceecccchhhHHHhhccCCCCcEEEEEccccc----ccCHHHHHH
Confidence 998665433 22334556889998 7987 555544322233556677778899999999887 889999999
Q ss_pred HHHHhHHHHHhhccCCCCeEEEEEEcCCCCc----cHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccC
Q 001292 436 DVGPLLIKYARRNSVEGSFKFVFLCGNSTDG----YNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSS 509 (1106)
Q Consensus 436 A~k~Ll~k~aklk~~~PdikfLIIVG~Gper----Y~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~ 509 (1106)
|+..+.++ +++++ ++++|.++.. +...++++++++++.+ +|.|+|.. +++..+|+.||++++||.
T Consensus 241 a~~~l~~~-------~~~~~-l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~adi~l~ps~ 311 (398)
T cd03800 241 AYAELPEL-------RERAN-LVIVGGPRDDILAMDEEELRELARELGVID-RVDFPGRVSREDLPALYRAADVFVNPAL 311 (398)
T ss_pred HHHHHHHh-------CCCeE-EEEEECCCCcchhhhhHHHHHHHHhcCCCc-eEEEeccCCHHHHHHHHHhCCEEEeccc
Confidence 99887643 37788 5777776542 2345678888899987 99999964 689999999999999998
Q ss_pred CCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHh
Q 001292 510 QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNM 589 (1106)
Q Consensus 510 ~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~ 589 (1106)
.| ++|++++||||+|+|||+++.+++.+++.++.+|++++++|+++++++|.++++|++. +.+|+.++++.+++.
T Consensus 312 ~e--~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~---~~~~~~~a~~~~~~~ 386 (398)
T cd03800 312 YE--PFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPAL---RRRLSRAGLRRARAR 386 (398)
T ss_pred cc--ccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHh
Confidence 86 9999999999999999999999999999999999999999999999999999999887 688999999999666
Q ss_pred cH-HHHHHHHH
Q 001292 590 LA-LDCVTRYA 599 (1106)
Q Consensus 590 fs-ee~v~~Y~ 599 (1106)
|+ +..+++|.
T Consensus 387 ~s~~~~~~~~~ 397 (398)
T cd03800 387 YTWERVAARLL 397 (398)
T ss_pred CCHHHHHHHHh
Confidence 65 55555664
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-28 Score=261.62 Aligned_cols=324 Identities=19% Similarity=0.244 Sum_probs=248.3
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchH---------------------HHHHHhHHHHHhhcc
Q 001292 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS---------------------LWEQIAGQISILGQE 282 (1106)
Q Consensus 224 RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~---------------------i~r~lg~lvkiIr~~ 282 (1106)
||+++++.+..||.+..+..++++|.+.|++|.+++........ .......+.+.++..
T Consensus 1 kIl~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (353)
T cd03811 1 KILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPVRVLKLKSLRDLLAILRLRRLLRKE 80 (353)
T ss_pred CeEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccchhhhceeeeecccccchhHHHHHHHHHHhc
Confidence 68999999999999999999999999999999999875432110 011222356777778
Q ss_pred CccEEEEccc-cHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecC
Q 001292 283 QYSLIDWSIF-DGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPD 361 (1106)
Q Consensus 283 ~pDiIh~~~~-~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S 361 (1106)
++|+++.+.. ...++..+..+ .++|+|+++|+............ .......++.+|.+++.+
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~~-----------~~~~~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~d~ii~~s 143 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAAR-----------LGTKLIVWEHNSLSLELKRKLRL------LLLIRKLYRRADKIVAVS 143 (353)
T ss_pred CCCEEEEcCccchhHHHHHHhh-----------cCCceEEEEcCcchhhhccchhH------HHHHHhhccccceEEEec
Confidence 9999999887 44444444431 26899999999632221111000 012345678999999998
Q ss_pred CChhhh---hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHH
Q 001292 362 YTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVG 438 (1106)
Q Consensus 362 ~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k 438 (1106)
...... ..+.+..++.+||| |+|. ..+.+...... .++...+.++++++|++.. .||.+.++++++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~vi~~-~~~~---~~~~~~~~~~~---~~~~~~~~~~i~~~g~~~~----~k~~~~~i~~~~ 212 (353)
T cd03811 144 EGVKEDLLKLLGIPPDKIEVIYN-PIDI---EEIRALAEEPL---ELGIPPDGPVILAVGRLSP----QKGFDTLIRAFA 212 (353)
T ss_pred cchhhhHHHhhcCCccccEEecC-CcCh---hhcCcccchhh---hcCCCCCceEEEEEecchh----hcChHHHHHHHH
Confidence 776655 22333678999998 7887 44443321111 3456678899999999887 889999999998
Q ss_pred HhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHH
Q 001292 439 PLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSL 518 (1106)
Q Consensus 439 ~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlv 518 (1106)
.+... +++++ |+++|.++.. +.++++++++++.+ +|.+.|..+++..+|+.||++++||..| ++|++
T Consensus 213 ~l~~~-------~~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~d~~i~ps~~e--~~~~~ 279 (353)
T cd03811 213 LLRKE-------GPDAR-LVILGDGPLR--EELEALAKELGLAD-RVHFLGFQSNPYPYLKAADLFVLSSRYE--GFPNV 279 (353)
T ss_pred Hhhhc-------CCCce-EEEEcCCccH--HHHHHHHHhcCCCc-cEEEecccCCHHHHHHhCCEEEeCcccC--CCCcH
Confidence 77642 36787 6888998865 88889999999987 9999999999999999999999999986 99999
Q ss_pred HHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHH---HHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH
Q 001292 519 IVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGL---SRAFSLFISNGKLSKFARTVASAGRLHAKNMLA 591 (1106)
Q Consensus 519 LLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeL---AeAI~~LLsDpelRk~r~~mGe~Are~ake~fs 591 (1106)
++|||++|+|||+++.+++.|++.++.+|++++++|++++ +++|..+.++++. ..+++.++++.+.+.|+
T Consensus 280 ~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 280 LLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLDPEL---RERLAAAARERVAREYS 352 (353)
T ss_pred HHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCChHH---HHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999 6777777777766 67888877777777664
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-28 Score=288.48 Aligned_cols=354 Identities=15% Similarity=0.147 Sum_probs=255.7
Q ss_pred CEEEEEeCCCCC----ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHH------------------------------
Q 001292 223 PRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSL------------------------------ 268 (1106)
Q Consensus 223 ~RIalVlg~L~~----gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i------------------------------ 268 (1106)
++|++|..++.+ ||-.-.+..|.++|+++|++|.|+.+..+.....
T Consensus 6 ~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (489)
T PRK14098 6 FKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVTA 85 (489)
T ss_pred cEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEec
Confidence 899999988766 8889999999999999999998876632111000
Q ss_pred HH-------------H------Hh--------------------HHHHHhhc--cCccEEEEccccHHHHHHHHHHHhhh
Q 001292 269 WE-------------Q------IA--------------------GQISILGQ--EQYSLIDWSIFDGIIADSLEAKEAIS 307 (1106)
Q Consensus 269 ~r-------------~------lg--------------------~lvkiIr~--~~pDiIh~~~~~~i~v~~La~k~~id 307 (1106)
.. . .+ +....++. .+||+||+|.+.+.++..+......
T Consensus 86 ~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~- 164 (489)
T PRK14098 86 LPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYA- 164 (489)
T ss_pred ccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhh-
Confidence 00 0 00 01223322 4789999999888887766654321
Q ss_pred hcccCCCCCCcEEEEEcCCcccccchh--h-------hhhhHH---hHHHHHHHHhccccEEEecCCChhhh-hc-----
Q 001292 308 SLMQEPFHSIPLVWIIQEDSLANRLPV--Y-------VERGFQ---NLLSYWKSVFSRVNVIVFPDYTLPML-YS----- 369 (1106)
Q Consensus 308 II~te~~~gIPVI~tIHna~Ls~r~~~--Y-------~~~gle---klis~~~~~l~~AD~VIa~S~~~~~~-~~----- 369 (1106)
....+.++|+|+|+|+......... + ...+.. ..+...+..+..+|.|+++|...... ..
T Consensus 165 --~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~ 242 (489)
T PRK14098 165 --DHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEA 242 (489)
T ss_pred --hccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCC
Confidence 0111357999999999432111100 0 000000 11223345678999999999766543 11
Q ss_pred -CCC------CCCEEEeCCCCCCcccccccCcch------------------hHHHHHHHcCCC--CCcEEEEEEcccCc
Q 001292 370 -VLD------AGNFFVIPGSPADVWAVEAYSKSH------------------EKYQLRKENGFL--KDEIVVVVVGSSFF 422 (1106)
Q Consensus 370 -gi~------~~KI~VIpN~GVDl~~~e~F~ps~------------------s~~~LR~~lGL~--~d~~VIL~VGRl~~ 422 (1106)
+++ ..++.+|+| |||. +.|.|.. .+..+++++|++ ++.++|+++||+.+
T Consensus 243 ~gl~~~l~~~~~kl~~I~N-GID~---~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~ 318 (489)
T PRK14098 243 FGLDKVLEERKMRLHGILN-GIDT---RQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDD 318 (489)
T ss_pred cChHHHHHhcCCCeeEEeC-Cccc---cccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccc
Confidence 222 578999998 8998 5565532 245678888986 45789999999998
Q ss_pred cccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHH
Q 001292 423 YNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLM 500 (1106)
Q Consensus 423 y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~Lyaa 500 (1106)
+||++.+++|+..+.+ ++++ |+|+|.|+..|.+.++++++++ ++ +|.|.|.. +++..+|++
T Consensus 319 ----~KG~d~li~a~~~l~~---------~~~~-lvivG~G~~~~~~~l~~l~~~~--~~-~V~~~g~~~~~~~~~~~a~ 381 (489)
T PRK14098 319 ----FQGAELLAESLEKLVE---------LDIQ-LVICGSGDKEYEKRFQDFAEEH--PE-QVSVQTEFTDAFFHLAIAG 381 (489)
T ss_pred ----cCcHHHHHHHHHHHHh---------cCcE-EEEEeCCCHHHHHHHHHHHHHC--CC-CEEEEEecCHHHHHHHHHh
Confidence 9999999999987753 3567 6889999865668899999876 34 89999844 457899999
Q ss_pred cCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhcc----CCeEEEEcCCCHHHHHHHHHHHH---hCcccHH
Q 001292 501 ADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE----GAQVIFFQKDNPEGLSRAFSLFI---SNGKLSK 573 (1106)
Q Consensus 501 ADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~D----g~nG~LV~~~D~eeLAeAI~~LL---sDpelRk 573 (1106)
||++++||.+| +||++.+|||+||+|+|+++.||+.|.+.+ +.+|+++++.|+++|+++|.+++ +|++.
T Consensus 382 aDi~l~PS~~E--~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~-- 457 (489)
T PRK14098 382 LDMLLMPGKIE--SCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEER-- 457 (489)
T ss_pred CCEEEeCCCCC--CchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHH--
Confidence 99999999987 999999999999999999999999988864 67999999999999999999865 56654
Q ss_pred HHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 001292 574 FARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 574 ~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk 607 (1106)
..+++.++. .+++.|+.++++|.++|+++++
T Consensus 458 -~~~~~~~~~--~~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 458 -WEELVLEAM--ERDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred -HHHHHHHHh--cCCCChHHHHHHHHHHHHHHhc
Confidence 466666553 2455667777899999998764
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-28 Score=279.97 Aligned_cols=338 Identities=15% Similarity=0.150 Sum_probs=229.9
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHH-----------------------H-----H--H-H
Q 001292 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSL-----------------------W-----E--Q-I 272 (1106)
Q Consensus 224 RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i-----------------------~-----r--~-l 272 (1106)
||+||++++... ...|+++|.++||+|+++|..+...... + + . .
T Consensus 1 ~il~~~~~~p~~-----~~~la~~L~~~G~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (396)
T cd03818 1 RILFVHQNFPGQ-----FRHLAPALAAQGHEVVFLTEPNAAPPPGGVRVVRYRPPRGPTSGTHPYLREFEEAVLRGQAVA 75 (396)
T ss_pred CEEEECCCCchh-----HHHHHHHHHHCCCEEEEEecCCCCCCCCCeeEEEecCCCCCCCCCCccchhHHHHHHHHHHHH
Confidence 588998888743 3569999999999999999854321000 0 0 0 0
Q ss_pred hHHHHH-hhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEc------CCcc--cccchhhh--hhhHH
Q 001292 273 AGQISI-LGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQ------EDSL--ANRLPVYV--ERGFQ 341 (1106)
Q Consensus 273 g~lvki-Ir~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIH------na~L--s~r~~~Y~--~~gle 341 (1106)
.....+ .+..+||+||.|...+... +... . +.++|+|...| +... ........ ...+.
T Consensus 76 ~~~~~~~~~~~~pdvi~~h~~~~~~~--~l~~-~--------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (396)
T cd03818 76 RALLALRAKGFRPDVIVAHPGWGETL--FLKD-V--------WPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLR 144 (396)
T ss_pred HHHHHHHhcCCCCCEEEECCccchhh--hHHH-h--------CCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHH
Confidence 001111 2346799999986443221 1211 1 24577776543 3211 10000000 00111
Q ss_pred hHHHHHHHHhccccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhH-HHHHHHcCCCCCcEEEEEEcc-
Q 001292 342 NLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEK-YQLRKENGFLKDEIVVVVVGS- 419 (1106)
Q Consensus 342 klis~~~~~l~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~-~~LR~~lGL~~d~~VIL~VGR- 419 (1106)
.........+..+|.+|++|............+++.|||| |+|. +.|.+.... ...+....+.++.++|+++||
T Consensus 145 ~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~ki~vI~n-gvd~---~~f~~~~~~~~~~~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 145 NRNALILLALAQADAGVSPTRWQRSTFPAELRSRISVIHD-GIDT---DRLRPDPQARLRLPNGRVLTPGDEVITFVARN 220 (396)
T ss_pred HhhhHhHHHHHhCCEEECCCHHHHhhCcHhhccceEEeCC-Cccc---cccCCCchhhhcccccccCCCCCeEEEEECCC
Confidence 1111123467899999999876555432222468999998 8998 667654322 222333345667889999997
Q ss_pred cCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCcc-------HHHHHHHHHHcCC---CCCcEEEcC
Q 001292 420 SFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGY-------NDALQEVASRLGL---LEHSVRHYG 489 (1106)
Q Consensus 420 l~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY-------~eeLkeLaeklGL---~d~rV~flG 489 (1106)
+.+ .||++.+++|+..+.++ .|+++ |+|+|.+...| .+..+++.++++. .+ +|+|+|
T Consensus 221 l~~----~Kg~~~ll~a~~~l~~~-------~~~~~-lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~V~f~G 287 (396)
T cd03818 221 LEP----YRGFHVFMRALPRLLRA-------RPDAR-VVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLS-RVHFLG 287 (396)
T ss_pred ccc----ccCHHHHHHHHHHHHHH-------CCCcE-EEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcc-eEEEeC
Confidence 776 89999999999887643 37888 57777632111 0123344444442 34 899999
Q ss_pred Ch--hhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHh
Q 001292 490 FN--GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 567 (1106)
Q Consensus 490 ~~--eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLs 567 (1106)
+. +++..+|+.||++++||..| ++|++++||||||+|||+++.+++.|++.++.+|++++++|+++|+++|.++++
T Consensus 288 ~v~~~~~~~~l~~adv~v~~s~~e--~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~ 365 (396)
T cd03818 288 RVPYDQYLALLQVSDVHVYLTYPF--VLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLD 365 (396)
T ss_pred CCCHHHHHHHHHhCcEEEEcCccc--ccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHh
Confidence 65 78999999999999999876 999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHhcHH-HHHHHHH
Q 001292 568 NGKLSKFARTVASAGRLHAKNMLAL-DCVTRYA 599 (1106)
Q Consensus 568 DpelRk~r~~mGe~Are~ake~fse-e~v~~Y~ 599 (1106)
|++. +.+|+++|++.++++|+. .++.+|.
T Consensus 366 ~~~~---~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 366 DPAR---RARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CHHH---HHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 9987 688999999999986654 4455664
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=273.89 Aligned_cols=332 Identities=14% Similarity=0.145 Sum_probs=241.2
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCc----------h-----HHHHH----------HhHHHHH
Q 001292 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS----------H-----SLWEQ----------IAGQISI 278 (1106)
Q Consensus 224 RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~----------~-----~i~r~----------lg~lvki 278 (1106)
+|+++.+++.+. .+.++..+++.|. |+++++++...... . ..... ......+
T Consensus 1 ~~~~~~~~~~~~-~e~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (367)
T cd05844 1 RVLIFRPLLLAP-SETFVRNQAEALR--RFRPVYVGGRRLGPAPLGALAVRLADLAGGKAGLRLGALRLLTGSAPQLRRL 77 (367)
T ss_pred CEEEEeCCCCCC-chHHHHHHHHhcc--cCCcEEEEeeccCCCCCcccceeeeecccchhHHHHHHHHhccccccHHHHH
Confidence 466777776665 7778999999995 77777776532110 0 00000 0013345
Q ss_pred hhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEE
Q 001292 279 LGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358 (1106)
Q Consensus 279 Ir~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VI 358 (1106)
++..++|+||.+.....+......+ ..++|+|+++|+.........................++.+|.++
T Consensus 78 ~~~~~~dvvh~~~~~~~~~~~~~~~----------~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 147 (367)
T cd05844 78 LRRHRPDLVHAHFGFDGVYALPLAR----------RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFI 147 (367)
T ss_pred HHhhCCCEEEeccCchHHHHHHHHH----------HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEE
Confidence 7778999999986554443333222 267999999998432211111000000111122334578899999
Q ss_pred ecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHH
Q 001292 359 FPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHD 436 (1106)
Q Consensus 359 a~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA 436 (1106)
+.+...... ..+++..++.+++| |+|. +.|.+.. ...+.++++++|++.. .||.+.+++|
T Consensus 148 ~~s~~~~~~~~~~~~~~~~i~vi~~-g~d~---~~~~~~~----------~~~~~~~i~~~G~~~~----~K~~~~li~a 209 (367)
T cd05844 148 AVSQFIRDRLLALGFPPEKVHVHPI-GVDT---AKFTPAT----------PARRPPRILFVGRFVE----KKGPLLLLEA 209 (367)
T ss_pred ECCHHHHHHHHHcCCCHHHeEEecC-CCCH---HhcCCCC----------CCCCCcEEEEEEeecc----ccChHHHHHH
Confidence 999766554 33667778999998 7887 4454321 1235678999999887 8999999999
Q ss_pred HHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccCCC---
Q 001292 437 VGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQV--- 511 (1106)
Q Consensus 437 ~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~~E--- 511 (1106)
+..+.++ +++++ |+++|+++.. ++++++++++|+.+ +|.|.|.. +++..+|+.||++++||...
T Consensus 210 ~~~l~~~-------~~~~~-l~ivG~g~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~ 278 (367)
T cd05844 210 FARLARR-------VPEVR-LVIIGDGPLL--AALEALARALGLGG-RVTFLGAQPHAEVRELMRRARIFLQPSVTAPSG 278 (367)
T ss_pred HHHHHHh-------CCCeE-EEEEeCchHH--HHHHHHHHHcCCCC-eEEECCCCCHHHHHHHHHhCCEEEECcccCCCC
Confidence 9877643 37887 7889998854 88999999999987 99999965 78999999999999999631
Q ss_pred -CCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhc
Q 001292 512 -EQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNML 590 (1106)
Q Consensus 512 -eEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~f 590 (1106)
.||||++++||||||+|||+++.+++.|++.++.+|+++++.|+++++++|.++++|+++ +.+|+.++++.+++.|
T Consensus 279 ~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~---~~~~~~~a~~~~~~~~ 355 (367)
T cd05844 279 DAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADPDL---RARMGAAGRRRVEERF 355 (367)
T ss_pred CccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHHHHC
Confidence 149999999999999999999999999999999999999999999999999999999987 6889999999987665
Q ss_pred H-HHHHHHHHH
Q 001292 591 A-LDCVTRYAR 600 (1106)
Q Consensus 591 s-ee~v~~Y~e 600 (1106)
+ +..+.++.+
T Consensus 356 s~~~~~~~l~~ 366 (367)
T cd05844 356 DLRRQTAKLEA 366 (367)
T ss_pred CHHHHHHHHhc
Confidence 5 555556654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-28 Score=265.25 Aligned_cols=339 Identities=18% Similarity=0.188 Sum_probs=245.5
Q ss_pred EEEEEeCCCC-CChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch---------------HHHHHHhHHHHHhhccCccEE
Q 001292 224 RIGLILGNMA-KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH---------------SLWEQIAGQISILGQEQYSLI 287 (1106)
Q Consensus 224 RIalVlg~L~-~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~---------------~i~r~lg~lvkiIr~~~pDiI 287 (1106)
||++|.+... .||.+..+..++++|.+.|++|++++....... ..........+.++..++|+|
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 80 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSARGPDVLVVSVAALYPSLLYGGEQEVVRVIVLDNPLDYRRAARAIRLSGPDVV 80 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcccCCCcccceeeeecCCchhHHHHHHHHhhcCCCEE
Confidence 5888888777 589999999999999999999999987433200 000111224566777899999
Q ss_pred EEccccHHH---HHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecC-CC
Q 001292 288 DWSIFDGII---ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPD-YT 363 (1106)
Q Consensus 288 h~~~~~~i~---v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S-~~ 363 (1106)
|++.....+ .......... ..++|+|+++|+......... . . ......++.+|.+++.| ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~~~h~~~~~~~~~~--~---~---~~~~~~~~~~d~ii~~s~~~ 145 (366)
T cd03822 81 VIQHEYGIFGGEAGLYLLLLLR-------GLGIPVVVTLHTVLLHEPRPG--D---R---ALLRLLLRRADAVIVMSSEL 145 (366)
T ss_pred EEeeccccccchhhHHHHHHHh-------hcCCCEEEEEecCCccccchh--h---h---HHHHHHHhcCCEEEEeeHHH
Confidence 986633221 1111111100 267999999999622111111 0 1 11234577899999996 33
Q ss_pred hhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHH
Q 001292 364 LPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIK 443 (1106)
Q Consensus 364 ~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k 443 (1106)
...........++.+||| ++|. ..+.+.... ++.....+.++|+++|++.+ .|+.+.+++|+..+.++
T Consensus 146 ~~~~~~~~~~~~~~~i~~-~~~~---~~~~~~~~~----~~~~~~~~~~~i~~~G~~~~----~K~~~~ll~a~~~~~~~ 213 (366)
T cd03822 146 LRALLLRAYPEKIAVIPH-GVPD---PPAEPPESL----KALGGLDGRPVLLTFGLLRP----YKGLELLLEALPLLVAK 213 (366)
T ss_pred HHHHHhhcCCCcEEEeCC-CCcC---cccCCchhh----HhhcCCCCCeEEEEEeeccC----CCCHHHHHHHHHHHHhh
Confidence 333332222468999997 6876 333322111 33445567889999999887 89999999999877643
Q ss_pred HHhhccCCCCeEEEEEEcCCCCccHHHHH----HHHHHcCCCCCcEEEcCC---hhhHHHHHHHcCeEEEccCCCCCCCc
Q 001292 444 YARRNSVEGSFKFVFLCGNSTDGYNDALQ----EVASRLGLLEHSVRHYGF---NGDVNGVLLMADIVLYGSSQVEQGFP 516 (1106)
Q Consensus 444 ~aklk~~~PdikfLIIVG~GperY~eeLk----eLaeklGL~d~rV~flG~---~eDL~~LyaaADVfV~PS~~EeEGFG 516 (1106)
+++++ |+++|.+... ..... ++++++++.+ +|.|.|. .+++..+|+.||++++||..|.+++|
T Consensus 214 -------~~~~~-l~i~G~~~~~-~~~~~~~~~~~i~~~~~~~-~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~ 283 (366)
T cd03822 214 -------HPDVR-LLVAGETHPD-LERYRGEAYALAERLGLAD-RVIFINRYLPDEELPELFSAADVVVLPYRSADQTQS 283 (366)
T ss_pred -------CCCeE-EEEeccCccc-hhhhhhhhHhHHHhcCCCC-cEEEecCcCCHHHHHHHHhhcCEEEecccccccccc
Confidence 37888 6788887654 12222 2377889987 9999985 57899999999999999987544999
Q ss_pred HHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHH
Q 001292 517 SLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVT 596 (1106)
Q Consensus 517 lvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~ 596 (1106)
++++||||+|+|||+++.++ .+.+.++.+|++++++|+++++++|..+++|++. ..+|++++++.++++.|+..+.
T Consensus 284 ~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~---~~~~~~~~~~~~~~~s~~~~~~ 359 (366)
T cd03822 284 GVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPEL---AQALRARAREYARAMSWERVAE 359 (366)
T ss_pred hHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHH---HHHHHHHHHHHHhhCCHHHHHH
Confidence 99999999999999999999 7777788899999999999999999999999887 5889999999999977788888
Q ss_pred HHHHHHH
Q 001292 597 RYARILE 603 (1106)
Q Consensus 597 ~Y~eLye 603 (1106)
+|.++|+
T Consensus 360 ~~~~~~~ 366 (366)
T cd03822 360 RYLRLLA 366 (366)
T ss_pred HHHHHhC
Confidence 9988873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-27 Score=261.47 Aligned_cols=341 Identities=18% Similarity=0.239 Sum_probs=250.4
Q ss_pred EEEEEeCCCCC--ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchH---------------HHH-------HHhHHHHHh
Q 001292 224 RIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS---------------LWE-------QIAGQISIL 279 (1106)
Q Consensus 224 RIalVlg~L~~--gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~---------------i~r-------~lg~lvkiI 279 (1106)
||+++++.+.+ +|.+..+..++++|.+.||+|++++........ ... ........+
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEVVVVRPFRVPTFKYPDFRLPLPIPRALIIIL 80 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCcccccccccccccccchhhhhhccccHHHHHHHHH
Confidence 57888877754 888999999999999999999999875432100 000 111133446
Q ss_pred hccCccEEEEccccHHH-HHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhh--hhHHhHH--HHHHHHhccc
Q 001292 280 GQEQYSLIDWSIFDGII-ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVE--RGFQNLL--SYWKSVFSRV 354 (1106)
Q Consensus 280 r~~~pDiIh~~~~~~i~-v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~--~glekli--s~~~~~l~~A 354 (1106)
+..++|+|+.+...... ......+ ..++|+|+++|.... ........ ....... ......++.+
T Consensus 81 ~~~~~Div~~~~~~~~~~~~~~~~~----------~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (374)
T cd03817 81 KELGPDIVHTHTPFSLGLLGLRVAR----------KLGIPVVATYHTMYE-DYTHYVPLGRLLARAVVRRKLSRRFYNRC 149 (374)
T ss_pred hhcCCCEEEECCchhhhhHHHHHHH----------HcCCCEEEEecCCHH-HHHHHHhcccchhHHHHHHHHHHHHhhhC
Confidence 77899999997653322 1111111 267899999998421 00000000 0001111 2234467899
Q ss_pred cEEEecCCChhhhhcC-CCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHH
Q 001292 355 NVIVFPDYTLPMLYSV-LDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVA 433 (1106)
Q Consensus 355 D~VIa~S~~~~~~~~g-i~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlL 433 (1106)
|.+++.+......... ....++.++|+ |+|. ..+.+.. ....+..+++.++.++|+++|++.. .|+.+.+
T Consensus 150 d~i~~~s~~~~~~~~~~~~~~~~~vi~~-~~~~---~~~~~~~-~~~~~~~~~~~~~~~~i~~~G~~~~----~k~~~~l 220 (374)
T cd03817 150 DAVIAPSEKIADLLREYGVKRPIEVIPT-GIDL---DRFEPVD-GDDERRKLGIPEDEPVLLYVGRLAK----EKNIDFL 220 (374)
T ss_pred CEEEeccHHHHHHHHhcCCCCceEEcCC-ccch---hccCccc-hhHHHHhcCCCCCCeEEEEEeeeec----ccCHHHH
Confidence 9999999776555221 12345888887 7887 4554433 2233667777788899999998876 8899999
Q ss_pred HHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccCCC
Q 001292 434 MHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQV 511 (1106)
Q Consensus 434 LeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~~E 511 (1106)
++++..+..+ +++++ ++++|.++.. +.++++++++++.+ +|.+.|.. +++..+|+.||++++||..|
T Consensus 221 ~~~~~~~~~~-------~~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e 289 (374)
T cd03817 221 IRAFARLLKE-------EPDVK-LVIVGDGPER--EELEELARELGLAD-RVIFTGFVPREELPDYYKAADLFVFASTTE 289 (374)
T ss_pred HHHHHHHHHh-------CCCeE-EEEEeCCchH--HHHHHHHHHcCCCC-cEEEeccCChHHHHHHHHHcCEEEeccccc
Confidence 9999877643 36787 6889998864 88999999999887 99999955 78999999999999999886
Q ss_pred CCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH
Q 001292 512 EQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA 591 (1106)
Q Consensus 512 eEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fs 591 (1106)
++|++++|||+||+|||+++.+++.+++.++.+|+++++.+. +++++|..++++++. .++|++++++.+++++
T Consensus 290 --~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~- 362 (374)
T cd03817 290 --TQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPEL---RRRLSKNAEESAEKFS- 362 (374)
T ss_pred --CcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHH---HHHHHHHHHHHHHHHH-
Confidence 999999999999999999999999999999999999998877 999999999999987 5889999999998877
Q ss_pred HHHHHHHHHHHHH
Q 001292 592 LDCVTRYARILEN 604 (1106)
Q Consensus 592 ee~v~~Y~eLyes 604 (1106)
...++.++|++
T Consensus 363 --~~~~~~~~~~~ 373 (374)
T cd03817 363 --FAKKVEKLYEE 373 (374)
T ss_pred --HHHHHHHHHhc
Confidence 33455556553
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-27 Score=264.45 Aligned_cols=319 Identities=18% Similarity=0.245 Sum_probs=246.3
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch-----------------HHHHHHh---HHHHHhhccC
Q 001292 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-----------------SLWEQIA---GQISILGQEQ 283 (1106)
Q Consensus 224 RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~-----------------~i~r~lg---~lvkiIr~~~ 283 (1106)
|||++++.+..+ .+..+..+++.|.++|++|+|++..+.... ..+.... .+.+.++..+
T Consensus 1 ki~~~~~~~~~~-~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (355)
T cd03799 1 KIAYLVKEFPRL-SETFILREILALEAAGHEVEIFSLRPPEDTLVHPEDRAELARTRYLARSLALLAQALVLARELRRLG 79 (355)
T ss_pred CEEEECCCCCCc-chHHHHHHHHHHHhCCCeEEEEEecCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 589999998666 667789999999999999999997543211 0111111 1344456689
Q ss_pred ccEEEEcccc-HHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCC
Q 001292 284 YSLIDWSIFD-GIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDY 362 (1106)
Q Consensus 284 pDiIh~~~~~-~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~ 362 (1106)
+|+||++... ..++..+..+. .++|+++++|+......... ......++.+|.+++.+.
T Consensus 80 ~Dii~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 80 IDHIHAHFGTTPATVAMLASRL----------GGIPYSFTAHGKDIFRSPDA----------IDLDEKLARADFVVAISE 139 (355)
T ss_pred CCEEEECCCCchHHHHHHHHHh----------cCCCEEEEEecccccccCch----------HHHHHHHhhCCEEEECCH
Confidence 9999998653 33344444321 46899999997532211110 123355788999999997
Q ss_pred Chhhhhc---CCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHH
Q 001292 363 TLPMLYS---VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGP 439 (1106)
Q Consensus 363 ~~~~~~~---gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~ 439 (1106)
....... +.+..++.++|| |+|. +.+.+.. .....+.++|+++|++.+ .||.+.+++++..
T Consensus 140 ~~~~~l~~~~~~~~~~~~vi~~-~~d~---~~~~~~~--------~~~~~~~~~i~~~g~~~~----~k~~~~l~~~~~~ 203 (355)
T cd03799 140 YNRQQLIRLLGCDPDKIHVVHC-GVDL---ERFPPRP--------PPPPGEPLRILSVGRLVE----KKGLDYLLEALAL 203 (355)
T ss_pred HHHHHHHHhcCCCcccEEEEeC-CcCH---HHcCCcc--------ccccCCCeEEEEEeeecc----ccCHHHHHHHHHH
Confidence 7665522 467788999998 7886 4443321 112346778999999877 8899999999987
Q ss_pred hHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccCC------C
Q 001292 440 LLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQ------V 511 (1106)
Q Consensus 440 Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~~------E 511 (1106)
+.. .+++++ ++++|.++.. +.+++.++++++.+ +|.+.|+. +++..+|+.||++++||.. |
T Consensus 204 l~~-------~~~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e 272 (355)
T cd03799 204 LKD-------RGIDFR-LDIVGDGPLR--DELEALIAELGLED-RVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDRE 272 (355)
T ss_pred Hhh-------cCCCeE-EEEEECCccH--HHHHHHHHHcCCCC-eEEECCcCChHHHHHHHHhCCEEEecceecCCCCcc
Confidence 753 237888 6889999876 88999999999887 99999966 7899999999999999987 6
Q ss_pred CCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH
Q 001292 512 EQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA 591 (1106)
Q Consensus 512 eEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fs 591 (1106)
+||++++||||+|+|||+++.++.++++.++.+|++++++|+++++++|.+++++++. ..+|++++++.+++.|+
T Consensus 273 --~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~a~~~~~~~~s 347 (355)
T cd03799 273 --GLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPEL---RREMGEAGRARVEEEFD 347 (355)
T ss_pred --CccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999998899999999999999999999999987 68899999999988776
Q ss_pred HHHH
Q 001292 592 LDCV 595 (1106)
Q Consensus 592 ee~v 595 (1106)
.+..
T Consensus 348 ~~~~ 351 (355)
T cd03799 348 IRKQ 351 (355)
T ss_pred HHHH
Confidence 5543
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-28 Score=266.73 Aligned_cols=336 Identities=17% Similarity=0.192 Sum_probs=245.6
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHHHHHHhHHHHHhhccCccEEEEccccHHHHHHHHH
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEA 302 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i~r~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~ 302 (1106)
+||+++......||.+..+..++++|.++|++|++++.... .+...++..++|+||.|......+.....
T Consensus 1 MkIl~~~~~~~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~----------~~~~~~~~~~~diih~~~~~~~~~~~~~~ 70 (365)
T cd03825 1 MKVLHLNTSDISGGAARAAYRLHRALQAAGVDSTMLVQEKK----------ALISKIEIINADIVHLHWIHGGFLSIEDL 70 (365)
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHHHhcCCceeEEEeecc----------hhhhChhcccCCEEEEEccccCccCHHHH
Confidence 58999998888899999999999999999999999997653 23456667899999998755444332222
Q ss_pred HHhhhhcccCCCCCCcEEEEEcCCccc-cc-------------------chhhhhhhHH-hHHHHHHHHh-ccccEEEec
Q 001292 303 KEAISSLMQEPFHSIPLVWIIQEDSLA-NR-------------------LPVYVERGFQ-NLLSYWKSVF-SRVNVIVFP 360 (1106)
Q Consensus 303 k~~idII~te~~~gIPVI~tIHna~Ls-~r-------------------~~~Y~~~gle-klis~~~~~l-~~AD~VIa~ 360 (1106)
.... .++|+|+++|+.... .. ...+...... .........+ ..++.++++
T Consensus 71 ~~~~--------~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 142 (365)
T cd03825 71 SKLL--------DRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAP 142 (365)
T ss_pred HHHH--------cCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEeh
Confidence 1111 478999999983110 00 0000000011 1111112222 355667777
Q ss_pred CCChhhh---hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHH
Q 001292 361 DYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDV 437 (1106)
Q Consensus 361 S~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~ 437 (1106)
+...... ...++..++.++|| |+|. +.|.+. .....+..++++++..+++++|+... ...|+.+.+++|+
T Consensus 143 s~~~~~~~~~~~~~~~~~~~vi~n-gi~~---~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~K~~~~ll~a~ 215 (365)
T cd03825 143 SRWLADCARSSSLFKGIPIEVIPN-GIDT---TIFRPR-DKREARKRLGLPADKKIILFGAVGGT--DPRKGFDELIEAL 215 (365)
T ss_pred hHHHHHHHHhccccCCCceEEeCC-CCcc---cccCCC-cHHHHHHHhCCCCCCeEEEEEecCCC--ccccCHHHHHHHH
Confidence 7554444 12256678999998 7987 555443 24456778888888888777765432 1378999999999
Q ss_pred HHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChh---hHHHHHHHcCeEEEccCCCCCC
Q 001292 438 GPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNG---DVNGVLLMADIVLYGSSQVEQG 514 (1106)
Q Consensus 438 k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~e---DL~~LyaaADVfV~PS~~EeEG 514 (1106)
..+..+ ..++++ ++++|.++.. .. .++.+ +|.++|... ++..+|+.||++++||..| +
T Consensus 216 ~~l~~~------~~~~~~-~~i~G~~~~~--~~-------~~~~~-~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e--~ 276 (365)
T cd03825 216 KRLAER------WKDDIE-LVVFGASDPE--IP-------PDLPF-PVHYLGSLNDDESLALIYSAADVFVVPSLQE--N 276 (365)
T ss_pred HHhhhc------cCCCeE-EEEeCCCchh--hh-------ccCCC-ceEecCCcCCHHHHHHHHHhCCEEEeccccc--c
Confidence 877532 136777 6888988753 11 14555 899999654 6899999999999999986 9
Q ss_pred CcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH-HH
Q 001292 515 FPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA-LD 593 (1106)
Q Consensus 515 FGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fs-ee 593 (1106)
||++++|||+||+|||+++.+++.|++.++.+|++++..|+++++++|.++++|++. ..++++++++.+++.|+ +.
T Consensus 277 ~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~~---~~~~~~~~~~~~~~~~s~~~ 353 (365)
T cd03825 277 FPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPDE---REELGEAARELAENEFDSRV 353 (365)
T ss_pred ccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhcCHHH
Confidence 999999999999999999999999999998899999999999999999999999986 58899999999977665 55
Q ss_pred HHHHHHHHHHHH
Q 001292 594 CVTRYARILENV 605 (1106)
Q Consensus 594 ~v~~Y~eLyesl 605 (1106)
.+++|.++|+++
T Consensus 354 ~~~~~~~~y~~~ 365 (365)
T cd03825 354 QAKRYLSLYEEL 365 (365)
T ss_pred HHHHHHHHHhhC
Confidence 566999999863
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-27 Score=293.38 Aligned_cols=350 Identities=12% Similarity=0.097 Sum_probs=247.0
Q ss_pred CCCEEEEEeCCCC-----------CChhHHHHHHHHHHH--------HHCCC----EEEEEEcCCCC-------------
Q 001292 221 RPPRIGLILGNMA-----------KDSRSLLLITVVKNL--------QKLGY----VFKIYAVRSGN------------- 264 (1106)
Q Consensus 221 r~~RIalVlg~L~-----------~gGesl~vv~LakaL--------qe~Gy----eVtV~t~~dg~------------- 264 (1106)
+..+|++++.+-. .||+.+++..++++| +++|+ +|+|+|-....
T Consensus 254 ~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~ 333 (784)
T TIGR02470 254 MVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEKV 333 (784)
T ss_pred ccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccccccccccccc
Confidence 4588999875541 489999999999985 67899 66787752110
Q ss_pred --------------------------chHHHHHHhH----HHHHhh-c--cCccEEEEccccHHHHHHHHHHHhhhhccc
Q 001292 265 --------------------------SHSLWEQIAG----QISILG-Q--EQYSLIDWSIFDGIIADSLEAKEAISSLMQ 311 (1106)
Q Consensus 265 --------------------------~~~i~r~lg~----lvkiIr-~--~~pDiIh~~~~~~i~v~~La~k~~idII~t 311 (1106)
...+|..+.. +...+. . ..||+||.|.+++.+++.+.++.
T Consensus 334 ~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~------- 406 (784)
T TIGR02470 334 YGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARK------- 406 (784)
T ss_pred cCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHh-------
Confidence 0111222211 222222 2 36999999999999988887754
Q ss_pred CCCCCCcEEEEEcCCcccccch---hhhhh-hHHhHHHHH---HHHhccccEEEecCCChhh------------------
Q 001292 312 EPFHSIPLVWIIQEDSLANRLP---VYVER-GFQNLLSYW---KSVFSRVNVIVFPDYTLPM------------------ 366 (1106)
Q Consensus 312 e~~~gIPVI~tIHna~Ls~r~~---~Y~~~-gleklis~~---~~~l~~AD~VIa~S~~~~~------------------ 366 (1106)
.++|++.+.|.....+... ++... ....+..++ ..+++.||.||+.+.....
T Consensus 407 ---lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p 483 (784)
T TIGR02470 407 ---LGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMP 483 (784)
T ss_pred ---cCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhccccccc
Confidence 6899999999743222111 11000 001111111 2467899999999853311
Q ss_pred -h---hcCC--CCCCEEEeCCCCCCcccccccCcchhH------------------HHHHHHcCC--CCCcEEEEEEccc
Q 001292 367 -L---YSVL--DAGNFFVIPGSPADVWAVEAYSKSHEK------------------YQLRKENGF--LKDEIVVVVVGSS 420 (1106)
Q Consensus 367 -~---~~gi--~~~KI~VIpN~GVDl~~~e~F~ps~s~------------------~~LR~~lGL--~~d~~VIL~VGRl 420 (1106)
+ ..|+ +..|+.+||+ |+|. +.|.|.... ...++.+|+ .+++++|+++||+
T Consensus 484 ~Ly~vvnGid~~~~Ki~VVpP-GVD~---~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL 559 (784)
T TIGR02470 484 GLYRVVHGIDVFDPKFNIVSP-GADE---SIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARL 559 (784)
T ss_pred ceeeeecCccCCcCCeEEECC-CcCh---hhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCC
Confidence 0 1123 4568999997 8998 556553211 112356675 5678899999999
Q ss_pred CccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCC----------ccHHHHHHHHHHcCCCCCcEEEcCC
Q 001292 421 FFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD----------GYNDALQEVASRLGLLEHSVRHYGF 490 (1106)
Q Consensus 421 ~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gpe----------rY~eeLkeLaeklGL~d~rV~flG~ 490 (1106)
.+ .||++.+++|+.++.. + .++++ |+|+|.++. .+.+.+.++++++|+.+ +|.|+|.
T Consensus 560 ~~----~KGid~LIeA~~~l~~----l---~~~~~-LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g-~V~flG~ 626 (784)
T TIGR02470 560 DR----VKNLTGLVECYGRSPK----L---RELVN-LVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHG-QIRWIGA 626 (784)
T ss_pred Cc----cCCHHHHHHHHHHhHh----h---CCCeE-EEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCC-eEEEccC
Confidence 98 9999999999976532 1 14566 566665432 13467788999999997 9999995
Q ss_pred h---hhHHHHHH----HcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHH
Q 001292 491 N---GDVNGVLL----MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFS 563 (1106)
Q Consensus 491 ~---eDL~~Lya----aADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~ 563 (1106)
. .++.++|. .+|+||+||.+| +||++++||||||+|||+++.||+.|+|.++.+|+++++.|+++++++|.
T Consensus 627 ~~~~~~~~elyr~iAd~adVfV~PS~~E--pFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~ 704 (784)
T TIGR02470 627 QLNRVRNGELYRYIADTKGIFVQPALYE--AFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIV 704 (784)
T ss_pred cCCcccHHHHHHHhhccCcEEEECCccc--CCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHH
Confidence 3 45666664 347999999987 99999999999999999999999999999999999999999999999999
Q ss_pred HHH----hCcccHHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHH
Q 001292 564 LFI----SNGKLSKFARTVASAGRLHAKNML-ALDCVTRYARIL 602 (1106)
Q Consensus 564 ~LL----sDpelRk~r~~mGe~Are~ake~f-see~v~~Y~eLy 602 (1106)
+++ +|++. ..+|+.+|++.+.+.| |...++++..+.
T Consensus 705 ~ll~kll~dp~~---~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 705 DFFEKCDEDPSY---WQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHHhcCCHHH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 876 57877 5889999999986655 556666887775
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-27 Score=264.36 Aligned_cols=328 Identities=16% Similarity=0.180 Sum_probs=240.8
Q ss_pred EEEEEeCCCCC--ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHHHHH--------------------HhHHHH-Hhh
Q 001292 224 RIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQ--------------------IAGQIS-ILG 280 (1106)
Q Consensus 224 RIalVlg~L~~--gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i~r~--------------------lg~lvk-iIr 280 (1106)
||+++...+.+ ||.+.++..++++|.++|++|+|++............ ...... .+.
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDEERNGHRVIRAPSLLNVASTPFSPSFFKQLKKL 80 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhhhccCceEEEeecccccccccccHHHHHHHHhc
Confidence 57888777664 8999999999999999999999998865332111000 000011 134
Q ss_pred ccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEec
Q 001292 281 QEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFP 360 (1106)
Q Consensus 281 ~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~ 360 (1106)
..++|++|++............ . ..++|+|++.|+........... .+ ......++.+|.+++.
T Consensus 81 ~~~~Dii~~~~~~~~~~~~~~~--~--------~~~~~~i~~~h~~~~~~~~~~~~----~~--~~~~~~~~~~d~vi~~ 144 (357)
T cd03795 81 AKKADVIHLHFPNPLADLALLL--L--------PRKKPVVVHWHSDIVKQKLLLKL----YR--PLQRRFLRRADAIVAT 144 (357)
T ss_pred CCCCCEEEEecCcchHHHHHHH--h--------ccCceEEEEEcChhhccchhhhh----hh--HHHHHHHHhcCEEEeC
Confidence 6789999987654432211111 1 14789999999854332211100 11 1112357899999999
Q ss_pred CCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHH
Q 001292 361 DYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVG 438 (1106)
Q Consensus 361 S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k 438 (1106)
+...... .......++.+||| |+|. ..+.+...... .......+.++|+++|++.. .||.+.+++|++
T Consensus 145 s~~~~~~~~~~~~~~~~~~~i~~-gi~~---~~~~~~~~~~~--~~~~~~~~~~~i~~~G~~~~----~K~~~~li~a~~ 214 (357)
T cd03795 145 SPNYAETSPVLRRFRDKVRVIPL-GLDP---ARYPRPDALEE--AIWRRAAGRPFFLFVGRLVY----YKGLDVLLEAAA 214 (357)
T ss_pred cHHHHHHHHHhcCCccceEEecC-CCCh---hhcCCcchhhh--HhhcCCCCCcEEEEeccccc----ccCHHHHHHHHH
Confidence 8766553 22222368889998 7987 44544321111 22344567889999999887 889999999997
Q ss_pred HhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccCCCCCCCc
Q 001292 439 PLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQGFP 516 (1106)
Q Consensus 439 ~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~~EeEGFG 516 (1106)
++. +++ ++++|.++.. +.++++++++++.+ +|.|+|.. +++..+|+.||++++||....|+||
T Consensus 215 ~l~-----------~~~-l~i~G~g~~~--~~~~~~~~~~~~~~-~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g 279 (357)
T cd03795 215 ALP-----------DAP-LVIVGEGPLE--AELEALAAALGLLD-RVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFG 279 (357)
T ss_pred hcc-----------CcE-EEEEeCChhH--HHHHHHHHhcCCcc-eEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccc
Confidence 653 456 6889999865 88999998899887 99999965 5699999999999999975335999
Q ss_pred HHHHHHHHhCCCEEecCCCCchhhhcc-CCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHH
Q 001292 517 SLIVRAMTFGIPVITPDFPIIKEYVAE-GAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCV 595 (1106)
Q Consensus 517 lvLLEAMA~G~PVIASD~gGI~EiV~D-g~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v 595 (1106)
++++|||++|+|||+++.++..+.+.+ +.+|++++++|+++++++|..+++|++. +++|++++++.++++|+.+.+
T Consensus 280 ~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~s~~~~ 356 (357)
T cd03795 280 IVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPEL---RERLGEAARERAEEEFTADRM 356 (357)
T ss_pred hHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHhcchHhh
Confidence 999999999999999999999999886 8899999999999999999999999987 689999999999999886643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-27 Score=255.95 Aligned_cols=343 Identities=19% Similarity=0.262 Sum_probs=256.5
Q ss_pred EEEEEeCCCCC--ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch-----------------------HHHHHHhHHHHH
Q 001292 224 RIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-----------------------SLWEQIAGQISI 278 (1106)
Q Consensus 224 RIalVlg~L~~--gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~-----------------------~i~r~lg~lvki 278 (1106)
||+++.+.... +|....+..+++.|.+.|++|++++....... ............
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRRL 80 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeecCcceecCCcccccchhHHHHHHHHHHHHH
Confidence 57777777655 78999999999999999999999988543210 011111224566
Q ss_pred hhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEE
Q 001292 279 LGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358 (1106)
Q Consensus 279 Ir~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VI 358 (1106)
+...++|+|+.+............+ ..++|+|+++|+......... ...............++.+|.++
T Consensus 81 ~~~~~~Dii~~~~~~~~~~~~~~~~----------~~~~~~i~~~h~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~i 149 (374)
T cd03801 81 LRRERFDVVHAHDWLALLAAALAAR----------LLGIPLVLTVHGLEFGRPGNE-LGLLLKLARALERRALRRADRII 149 (374)
T ss_pred hhhcCCcEEEEechhHHHHHHHHHH----------hcCCcEEEEeccchhhccccc-hhHHHHHHHHHHHHHHHhCCEEE
Confidence 7778999999988777665542222 268999999999533221110 00000111112234578999999
Q ss_pred ecCCChhhhhc---CCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHH
Q 001292 359 FPDYTLPMLYS---VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMH 435 (1106)
Q Consensus 359 a~S~~~~~~~~---gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLe 435 (1106)
+.+........ ..+..++.++|+ |+|. ..+.+.. ...+.......+.++++++|++.. .|+.+.+++
T Consensus 150 ~~s~~~~~~~~~~~~~~~~~~~~i~~-~~~~---~~~~~~~--~~~~~~~~~~~~~~~i~~~g~~~~----~k~~~~~i~ 219 (374)
T cd03801 150 AVSEATREELRELGGVPPEKITVIPN-GVDT---ERFRPAP--RAARRRLGIPEDEPVILFVGRLVP----RKGVDLLLE 219 (374)
T ss_pred EecHHHHHHHHhcCCCCCCcEEEecC-cccc---cccCccc--hHHHhhcCCcCCCeEEEEecchhh----hcCHHHHHH
Confidence 99876665522 222368999998 7887 4444332 333445566677889999998876 889999999
Q ss_pred HHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccCCCCC
Q 001292 436 DVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQ 513 (1106)
Q Consensus 436 A~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~~EeE 513 (1106)
++..+... +++++ ++++|.++.. +.++++++++++.+ +|.+.|.. +++..+|+.||++++|+..+
T Consensus 220 ~~~~~~~~-------~~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~~di~i~~~~~~-- 286 (374)
T cd03801 220 ALAKLRKE-------YPDVR-LVIVGDGPLR--EELEALAAELGLGD-RVTFLGFVPDEDLPALYAAADVFVLPSLYE-- 286 (374)
T ss_pred HHHHHhhh-------cCCeE-EEEEeCcHHH--HHHHHHHHHhCCCc-ceEEEeccChhhHHHHHHhcCEEEecchhc--
Confidence 99877642 26787 6888877754 88888888889887 99999976 89999999999999999886
Q ss_pred CCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH-H
Q 001292 514 GFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA-L 592 (1106)
Q Consensus 514 GFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fs-e 592 (1106)
++|++++|||++|+|||+++.++..+++.++.+|++++..|+++++++|.++++|++. ..++++++++.+.+.++ +
T Consensus 287 ~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 363 (374)
T cd03801 287 GFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPEL---RRRLGEAARERVAERFSWD 363 (374)
T ss_pred cccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHH---HHHHHHHHHHHHHHhcCHH
Confidence 9999999999999999999999999999988999999999999999999999999987 68899999966655554 5
Q ss_pred HHHHHHHHHHH
Q 001292 593 DCVTRYARILE 603 (1106)
Q Consensus 593 e~v~~Y~eLye 603 (1106)
..+..+.++|+
T Consensus 364 ~~~~~~~~~~~ 374 (374)
T cd03801 364 RVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHhhC
Confidence 55668887763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=257.03 Aligned_cols=330 Identities=19% Similarity=0.267 Sum_probs=240.4
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch-------------------HHH---HHHhHHHHHhhc
Q 001292 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-------------------SLW---EQIAGQISILGQ 281 (1106)
Q Consensus 224 RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~-------------------~i~---r~lg~lvkiIr~ 281 (1106)
||+++++. .+|....+..+++.|.+.|++|++++..+.... ..+ .....+.+.++.
T Consensus 1 kIl~i~~~--~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (359)
T cd03808 1 KILHIVTV--DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELEALGVKVIPIPLDRRGINPFKDLKALLRLYRLLRK 78 (359)
T ss_pred CeeEEEec--chhHHHHHHHHHHHHHhcCCeeEEEecCCCcccccccCCceEEeccccccccChHhHHHHHHHHHHHHHh
Confidence 57788777 678889999999999999999999987543210 011 112225566777
Q ss_pred cCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHH-HHHHHhccccEEEec
Q 001292 282 EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLS-YWKSVFSRVNVIVFP 360 (1106)
Q Consensus 282 ~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis-~~~~~l~~AD~VIa~ 360 (1106)
.++|+++.+.....++..+..+.. ...++++..|+.......... . ..... ..+..++.+|.+++.
T Consensus 79 ~~~dvv~~~~~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~d~ii~~ 145 (359)
T cd03808 79 ERPDIVHTHTPKPGILGRLAARLA---------GVPKVIYTVHGLGFVFTSGGL-K---RRLYLLLERLALRFTDKVIFQ 145 (359)
T ss_pred cCCCEEEEccccchhHHHHHHHHc---------CCCCEEEEecCcchhhccchh-H---HHHHHHHHHHHHhhccEEEEc
Confidence 899999998777666666655422 456888888885322211110 1 11111 123456788999999
Q ss_pred CCChhhhh--cC-CCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHH
Q 001292 361 DYTLPMLY--SV-LDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDV 437 (1106)
Q Consensus 361 S~~~~~~~--~g-i~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~ 437 (1106)
+....... .+ .+..+..++++.++|. +.+.+.... ...+.++++++|++.. .|+.+.+++++
T Consensus 146 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--------~~~~~~~i~~~G~~~~----~k~~~~li~~~ 210 (359)
T cd03808 146 NEDDRDLALKLGIIKKKKTVLIPGSGVDL---DRFSPSPEP--------IPEDDPVFLFVARLLK----DKGIDELLEAA 210 (359)
T ss_pred CHHHHHHHHHhcCCCcCceEEecCCCCCh---hhcCccccc--------cCCCCcEEEEEecccc----ccCHHHHHHHH
Confidence 87665552 12 2213334444447886 444332110 2456789999999887 88999999999
Q ss_pred HHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHH-HHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCc
Q 001292 438 GPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQE-VASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFP 516 (1106)
Q Consensus 438 k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLke-LaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFG 516 (1106)
+.+.+ .+++++ ++++|.++.. ..... ++.+.+..+ +|.+.|+.+++..+|+.||++++||..| ++|
T Consensus 211 ~~l~~-------~~~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adi~i~ps~~e--~~~ 277 (359)
T cd03808 211 RILKA-------KGPNVR-LLLVGDGDEE--NPAAILEIEKLGLEG-RVEFLGFRDDVPELLAAADVFVLPSYRE--GLP 277 (359)
T ss_pred HHHHh-------cCCCeE-EEEEcCCCcc--hhhHHHHHHhcCCcc-eEEEeeccccHHHHHHhccEEEecCccc--Ccc
Confidence 87753 237888 6888988765 33333 266667776 8999999999999999999999999986 999
Q ss_pred HHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHH-
Q 001292 517 SLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCV- 595 (1106)
Q Consensus 517 lvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v- 595 (1106)
++++|||++|+|||+++.++..+++.++.+|++++++|+++++++|..++.|++. ..++++++++.+.+.|+.+.+
T Consensus 278 ~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~s~~~~~ 354 (359)
T cd03808 278 RVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPEL---RARMGQAARKRAEEEFDEEIVV 354 (359)
T ss_pred hHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhcCHHHHH
Confidence 9999999999999999999999999989999999999999999999999999987 688999999997777765444
Q ss_pred HHHH
Q 001292 596 TRYA 599 (1106)
Q Consensus 596 ~~Y~ 599 (1106)
..|.
T Consensus 355 ~~~~ 358 (359)
T cd03808 355 KKLL 358 (359)
T ss_pred HHhh
Confidence 3553
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=278.01 Aligned_cols=337 Identities=11% Similarity=0.136 Sum_probs=222.6
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchH----------------------HH----------H
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS----------------------LW----------E 270 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~----------------------i~----------r 270 (1106)
+||++|...+..||.+..+..|++.|.+.|++|.++......... .. .
T Consensus 1 mkil~i~~~l~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (405)
T PRK10125 1 MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFG 80 (405)
T ss_pred CeEEEEEeeecCCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccccCCcceEEEecccHHHHHHHHHHHhcchhhcc
Confidence 589999999999999999999999999999999998875331110 00 0
Q ss_pred HHhHHHHHh-hccCccEEEEccccHHHHHHH--HHHHhhhhcccCCCCCCcEEEEEcCCc-cc----------ccc----
Q 001292 271 QIAGQISIL-GQEQYSLIDWSIFDGIIADSL--EAKEAISSLMQEPFHSIPLVWIIQEDS-LA----------NRL---- 332 (1106)
Q Consensus 271 ~lg~lvkiI-r~~~pDiIh~~~~~~i~v~~L--a~k~~idII~te~~~gIPVI~tIHna~-Ls----------~r~---- 332 (1106)
......+.| +..+||+||+|.+.+.++... ..... ++ .....++|+|||.|+.- +. .+.
T Consensus 81 ~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~--~~-~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~ 157 (405)
T PRK10125 81 NFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCE--KV-KNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQ 157 (405)
T ss_pred hHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHh--hh-hcccCCCCEEEecccccccCCCcCCCcccccccccCC
Confidence 011134444 568999999998887543321 11000 00 00035789999999921 11 100
Q ss_pred -----hhhhhhhH---HhH----HHHHHHHhccccEEEecCCChhhh-hcCCCCCCEEEeCCCCCCcccccccCcchhHH
Q 001292 333 -----PVYVERGF---QNL----LSYWKSVFSRVNVIVFPDYTLPML-YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKY 399 (1106)
Q Consensus 333 -----~~Y~~~gl---ekl----is~~~~~l~~AD~VIa~S~~~~~~-~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~ 399 (1106)
..|+.... .+. ...+...++.++.+|++|...... ...+...++.+||| |+|+ +.+.+.....
T Consensus 158 ~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~~~~i~vI~N-Gid~---~~~~~~~~~~ 233 (405)
T PRK10125 158 KCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINN-GIDM---ATEAILAELP 233 (405)
T ss_pred CCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcCCCCEEEeCC-CcCc---cccccccccc
Confidence 00211000 111 111223345567889988766555 22334578999998 8996 2222111111
Q ss_pred HHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcC
Q 001292 400 QLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLG 479 (1106)
Q Consensus 400 ~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklG 479 (1106)
..+ .+++.++|+++|+...+ + .|+++.+++|+..+. ++++ |+++|.++.. .
T Consensus 234 ~~~----~~~~~~~il~v~~~~~~-~-~Kg~~~li~A~~~l~----------~~~~-L~ivG~g~~~--~---------- 284 (405)
T PRK10125 234 PVR----ETQGKPKIAVVAHDLRY-D-GKTDQQLVREMMALG----------DKIE-LHTFGKFSPF--T---------- 284 (405)
T ss_pred ccc----cCCCCCEEEEEEecccc-C-CccHHHHHHHHHhCC----------CCeE-EEEEcCCCcc--c----------
Confidence 111 23467789999984321 2 589999999996542 4677 7889987643 1
Q ss_pred CCCCcEEEcCC---hhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHH
Q 001292 480 LLEHSVRHYGF---NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPE 556 (1106)
Q Consensus 480 L~d~rV~flG~---~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~e 556 (1106)
.+ +|.++|. ..++..+|++||+||+||..| +||++++||||||+|||++++||++|++.++ +|++++++|++
T Consensus 285 -~~-~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~E--gfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d~~ 359 (405)
T PRK10125 285 -AG-NVVNHGFETDKRKLMSALNQMDALVFSSRVD--NYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTVSEEEVL 359 (405)
T ss_pred -cc-ceEEecCcCCHHHHHHHHHhCCEEEECCccc--cCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEECCCCHH
Confidence 12 5777774 357899999999999999976 9999999999999999999999999999775 99999999999
Q ss_pred HHHHHHHHHHhCcccHHH-HHHHHHHHHHHHHHhcH-HHHHHHHHHHHHHH
Q 001292 557 GLSRAFSLFISNGKLSKF-ARTVASAGRLHAKNMLA-LDCVTRYARILENV 605 (1106)
Q Consensus 557 eLAeAI~~LLsDpelRk~-r~~mGe~Are~ake~fs-ee~v~~Y~eLyesl 605 (1106)
+||+++ ++++++. ...+..++++.+.+.|+ +.++++|.++|+++
T Consensus 360 ~La~~~-----~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 360 QLAQLS-----KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred HHHhcc-----CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 999854 3333100 01123457777777666 55566999999863
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-27 Score=252.78 Aligned_cols=336 Identities=19% Similarity=0.254 Sum_probs=251.7
Q ss_pred EEEEeCCCCC---ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch-----------------------------HHHHHH
Q 001292 225 IGLILGNMAK---DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-----------------------------SLWEQI 272 (1106)
Q Consensus 225 IalVlg~L~~---gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~-----------------------------~i~r~l 272 (1106)
|+++.+.... +|.+..+..+++.|.+.|++|++++....... ..+...
T Consensus 1 iLii~~~~p~~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (377)
T cd03798 1 ILVISSLYPPPNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLAA 80 (377)
T ss_pred CeEeccCCCCCCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhcccccccccccccCcchhhccccchhHHHHH
Confidence 4566666654 88999999999999999999999987442110 011122
Q ss_pred hHHHHHhh--ccCccEEEEccccHHHH-HHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHH
Q 001292 273 AGQISILG--QEQYSLIDWSIFDGIIA-DSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKS 349 (1106)
Q Consensus 273 g~lvkiIr--~~~pDiIh~~~~~~i~v-~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~ 349 (1106)
..+...++ ..++|+|+.+....... .....+ ..++|+++++|+.......... ........
T Consensus 81 ~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~----------~~~~~~i~~~h~~~~~~~~~~~------~~~~~~~~ 144 (377)
T cd03798 81 RALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKR----------KLGIPLVVTLHGSDVNLLPRKR------LLRALLRR 144 (377)
T ss_pred HHHHHHHhcccCCCCEEEEeccchHHHHHHHHHH----------hcCCCEEEEeecchhcccCchh------hHHHHHHH
Confidence 22566776 78999998875443222 222221 2568999999995433221111 11222345
Q ss_pred HhccccEEEecCCChhhhhcC--CCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCcccccc
Q 001292 350 VFSRVNVIVFPDYTLPMLYSV--LDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELS 427 (1106)
Q Consensus 350 ~l~~AD~VIa~S~~~~~~~~g--i~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~ 427 (1106)
.++.+|.+++.+......... .+..++.++|+ |+|. ..+.+...... ...+...+.++++++|++.. .
T Consensus 145 ~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~-~~~~---~~~~~~~~~~~--~~~~~~~~~~~i~~~g~~~~----~ 214 (377)
T cd03798 145 ALRRADAVIAVSEALADELKALGIDPEKVTVIPN-GVDT---ERFSPADRAEA--RKLGLPEDKKVILFVGRLVP----R 214 (377)
T ss_pred HHhcCCeEEeCCHHHHHHHHHhcCCCCceEEcCC-CcCc---ccCCCcchHHH--HhccCCCCceEEEEeccCcc----c
Confidence 678999999999776666333 47788999998 7886 44544322221 34455667889999998877 8
Q ss_pred CCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEE
Q 001292 428 WDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVL 505 (1106)
Q Consensus 428 Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV 505 (1106)
|+.+.++++++.+.++ +++++ ++++|.++.. +.++++++.+++.+ +|.+.|.. +++..+|..||+++
T Consensus 215 k~~~~li~~~~~~~~~-------~~~~~-l~i~g~~~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~ad~~i 283 (377)
T cd03798 215 KGIDYLIEALARLLKK-------RPDVH-LVIVGDGPLR--EALEALAAELGLED-RVTFLGAVPHEEVPAYYAAADVFV 283 (377)
T ss_pred cCHHHHHHHHHHHHhc-------CCCeE-EEEEcCCcch--HHHHHHHHhcCCcc-eEEEeCCCCHHHHHHHHHhcCeee
Confidence 8999999999877632 37787 6889998865 88888888889887 89999955 67999999999999
Q ss_pred EccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH
Q 001292 506 YGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLH 585 (1106)
Q Consensus 506 ~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ 585 (1106)
+||..+ ++|++++|||++|+|||+++.++..+++.++.+|+++++.|+++++++|.+++++++. +++.++++.
T Consensus 284 ~~~~~~--~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~-----~~~~~~~~~ 356 (377)
T cd03798 284 LPSLRE--GFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL-----RLGRAARRR 356 (377)
T ss_pred cchhhc--cCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH-----HHhHHHHHH
Confidence 999986 9999999999999999999999999999999999999999999999999999999872 566677777
Q ss_pred HHHhcHH-HHHHHHHHHHHH
Q 001292 586 AKNMLAL-DCVTRYARILEN 604 (1106)
Q Consensus 586 ake~fse-e~v~~Y~eLyes 604 (1106)
+.+.++. ..+..+.++|++
T Consensus 357 ~~~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 357 VAERFSWENVAERLLELYRE 376 (377)
T ss_pred HHHHhhHHHHHHHHHHHHhh
Confidence 7776664 455588888875
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-27 Score=258.32 Aligned_cols=305 Identities=15% Similarity=0.102 Sum_probs=226.1
Q ss_pred CEEEEEeCCC------CCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch--------------------HHHHHHhHHH
Q 001292 223 PRIGLILGNM------AKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH--------------------SLWEQIAGQI 276 (1106)
Q Consensus 223 ~RIalVlg~L------~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~--------------------~i~r~lg~lv 276 (1106)
+||++|.+.+ ..||.+..+..+++.|.+.||+|++++....... ........+.
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEALALAE 80 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccceeeccCCCcccccchhhHhhHHHHHHHH
Confidence 5899999887 6699999999999999999999999987543210 0111222256
Q ss_pred HHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccE
Q 001292 277 SILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNV 356 (1106)
Q Consensus 277 kiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~ 356 (1106)
+.++..++|+||.+......+ ... ..++|+|+++|+........ ........+.
T Consensus 81 ~~~~~~~~Divh~~~~~~~~~--~~~-----------~~~~~~v~~~h~~~~~~~~~-------------~~~~~~~~~~ 134 (335)
T cd03802 81 RALAAGDFDIVHNHSLHLPLP--FAR-----------PLPVPVVTTLHGPPDPELLK-------------LYYAARPDVP 134 (335)
T ss_pred HHHhcCCCCEEEecCcccchh--hhc-----------ccCCCEEEEecCCCCcccch-------------HHHhhCcCCe
Confidence 677788999999988776655 211 26789999999964221111 1123456667
Q ss_pred EEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHH
Q 001292 357 IVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHD 436 (1106)
Q Consensus 357 VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA 436 (1106)
+++.+.......... .++.+||| |+|. +.|.+. +.++.+++++|++.. .||.+.++++
T Consensus 135 ~~~~s~~~~~~~~~~--~~~~vi~n-gvd~---~~~~~~------------~~~~~~i~~~Gr~~~----~Kg~~~li~~ 192 (335)
T cd03802 135 FVSISDAQRRPWPPL--PWVATVHN-GIDL---DDYPFR------------GPKGDYLLFLGRISP----EKGPHLAIRA 192 (335)
T ss_pred EEEecHHHHhhcccc--cccEEecC-CcCh---hhCCCC------------CCCCCEEEEEEeecc----ccCHHHHHHH
Confidence 777776655543332 68899998 7997 555431 234568999999877 8999999998
Q ss_pred HHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcC-CCCCcEEEcCCh--hhHHHHHHHcCeEEEccCCCCC
Q 001292 437 VGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLG-LLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQ 513 (1106)
Q Consensus 437 ~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklG-L~d~rV~flG~~--eDL~~LyaaADVfV~PS~~EeE 513 (1106)
++. .+++ |+++|.++.. +.+........ +.+ +|.|+|+. .++..+|+.+|++++||... |
T Consensus 193 ~~~------------~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~~-~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~-E 255 (335)
T cd03802 193 ARR------------AGIP-LKLAGPVSDP--DYFYREIAPELLDGP-DIEYLGEVGGAEKAELLGNARALLFPILWE-E 255 (335)
T ss_pred HHh------------cCCe-EEEEeCCCCH--HHHHHHHHHhcccCC-cEEEeCCCCHHHHHHHHHhCcEEEeCCccc-C
Confidence 742 3566 6889998764 66666555544 455 89999965 56889999999999999863 4
Q ss_pred CCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH-H
Q 001292 514 GFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA-L 592 (1106)
Q Consensus 514 GFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fs-e 592 (1106)
+||++++||||||+|||++|.+++.|++.++.+|++++. +++++++|..+++.+. +++++.+.+.|+ +
T Consensus 256 ~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~---------~~~~~~~~~~~s~~ 324 (335)
T cd03802 256 PFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDR---------AACRRRAERRFSAA 324 (335)
T ss_pred CcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHH---------HHHHHHHHHhCCHH
Confidence 999999999999999999999999999999999999975 9999999999865432 245556656655 5
Q ss_pred HHHHHHHHHHH
Q 001292 593 DCVTRYARILE 603 (1106)
Q Consensus 593 e~v~~Y~eLye 603 (1106)
..+.+|.++|+
T Consensus 325 ~~~~~~~~~y~ 335 (335)
T cd03802 325 RMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHhC
Confidence 56669999884
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-28 Score=283.61 Aligned_cols=282 Identities=19% Similarity=0.235 Sum_probs=219.1
Q ss_pred cCccEEEEcccc-HHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccc---------hhhhhhhHHhHHHHH-HHH
Q 001292 282 EQYSLIDWSIFD-GIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRL---------PVYVERGFQNLLSYW-KSV 350 (1106)
Q Consensus 282 ~~pDiIh~~~~~-~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~---------~~Y~~~gleklis~~-~~~ 350 (1106)
.++|++|.+... ..++..+..+ ..++|+|++.|+.....+. ..+....+.++...+ ..+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~----------~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 241 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKA----------RRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLA 241 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHH----------HhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 578999998643 3334444433 2689999999994322111 000000011111111 346
Q ss_pred hccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccC
Q 001292 351 FSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSW 428 (1106)
Q Consensus 351 l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~K 428 (1106)
++.||.|++.+...... ..+.+++|+.+||| |+|. +.|.+.... ...++.++|+++||+.+ .|
T Consensus 242 ~~~ad~Ii~~s~~~~~~~~~~g~~~~ki~vIpN-gid~---~~f~~~~~~-------~~~~~~~~i~~vGrl~~----~K 306 (475)
T cd03813 242 YQAADRITTLYEGNRERQIEDGADPEKIRVIPN-GIDP---ERFAPARRA-------RPEKEPPVVGLIGRVVP----IK 306 (475)
T ss_pred HHhCCEEEecCHHHHHHHHHcCCCHHHeEEeCC-CcCH---HHcCCcccc-------ccCCCCcEEEEEecccc----cc
Confidence 78999999998765544 45777889999998 8997 566543211 23457789999999988 89
Q ss_pred CHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCC--ccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEE
Q 001292 429 DYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD--GYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLY 506 (1106)
Q Consensus 429 g~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gpe--rY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~ 506 (1106)
|++.+++|++.+.++ .|+++ ++|+|.+++ .|.++++++++++|+.+ +|.|+| ..++.++|+.+|++|+
T Consensus 307 g~~~li~a~~~l~~~-------~p~~~-l~IvG~g~~~~~~~~e~~~li~~l~l~~-~V~f~G-~~~v~~~l~~aDv~vl 376 (475)
T cd03813 307 DIKTFIRAAAIVRKK-------IPDAE-GWVIGPTDEDPEYAEECRELVESLGLED-NVKFTG-FQNVKEYLPKLDVLVL 376 (475)
T ss_pred CHHHHHHHHHHHHHh-------CCCeE-EEEECCCCcChHHHHHHHHHHHHhCCCC-eEEEcC-CccHHHHHHhCCEEEe
Confidence 999999999887643 38888 688888743 36788899999999987 999999 7799999999999999
Q ss_pred ccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhcc------CCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHH
Q 001292 507 GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE------GAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVAS 580 (1106)
Q Consensus 507 PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~D------g~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe 580 (1106)
||..| +||++++||||||+|||+++.++++|++.+ |.+|+++++.|+++++++|.++++|++. +.+|++
T Consensus 377 pS~~E--g~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~~~---~~~~~~ 451 (475)
T cd03813 377 TSISE--GQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKDPEL---RRAMGE 451 (475)
T ss_pred Cchhh--cCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcCHHH---HHHHHH
Confidence 99986 999999999999999999999999999988 5699999999999999999999999987 688999
Q ss_pred HHHHHHHHhcH-HHHHHHHHHHHH
Q 001292 581 AGRLHAKNMLA-LDCVTRYARILE 603 (1106)
Q Consensus 581 ~Are~ake~fs-ee~v~~Y~eLye 603 (1106)
+|++.++++|+ +.++++|.++|+
T Consensus 452 ~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 452 AGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999887 556669999884
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-26 Score=258.07 Aligned_cols=331 Identities=13% Similarity=0.117 Sum_probs=227.1
Q ss_pred EEEEEeCC-C--CCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch--HH--------------------HHHHhHHHHH
Q 001292 224 RIGLILGN-M--AKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH--SL--------------------WEQIAGQISI 278 (1106)
Q Consensus 224 RIalVlg~-L--~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~--~i--------------------~r~lg~lvki 278 (1106)
|||+|... + ..||.+..+..+++.|+++|++|+|++..+.... .. ...+..+...
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQKETEYNGVRLIHIPAPEIGGLGTIIYDILAILHA 80 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCcccccCCceEEEcCCCCccchhhhHHHHHHHHHH
Confidence 57777443 3 3389999999999999999999999987543211 00 0001111111
Q ss_pred h-hccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHH-HHHhccccE
Q 001292 279 L-GQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYW-KSVFSRVNV 356 (1106)
Q Consensus 279 I-r~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~-~~~l~~AD~ 356 (1106)
+ ....++++|...+....+..+.. ..++|+|+++|+............ .++.... ...++.+|.
T Consensus 81 ~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~v~~~h~~~~~~~~~~~~~---~~~~~~~~~~~~~~ad~ 146 (363)
T cd04955 81 LFVKRDIDHVHALGPAIAPFLPLLR-----------LKGKKVVVNMDGLEWKRAKWGRPA---KRYLKFGEKLAVKFADR 146 (363)
T ss_pred HhccCCeEEEEecCccHHHHHHHHH-----------hcCCCEEEEccCcceeecccccch---hHHHHHHHHHHHhhccE
Confidence 1 13344455544444323322222 147899999998543221110001 1111111 234678999
Q ss_pred EEecCCChhhhh-cCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHH
Q 001292 357 IVFPDYTLPMLY-SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMH 435 (1106)
Q Consensus 357 VIa~S~~~~~~~-~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLe 435 (1106)
|++.|....... ...+... .+||| |+|. ..+.+ ....+..+++.++. .++++||+.. .||.+.+++
T Consensus 147 ii~~s~~~~~~~~~~~~~~~-~~i~n-gv~~---~~~~~---~~~~~~~~~~~~~~-~i~~~G~~~~----~Kg~~~li~ 213 (363)
T cd04955 147 LIADSPGIKEYLKEKYGRDS-TYIPY-GADH---VVSSE---EDEILKKYGLEPGR-YYLLVGRIVP----ENNIDDLIE 213 (363)
T ss_pred EEeCCHHHHHHHHHhcCCCC-eeeCC-CcCh---hhcch---hhhhHHhcCCCCCc-EEEEEecccc----cCCHHHHHH
Confidence 999997766553 2333333 78898 7887 33332 22345566665554 6789999887 899999999
Q ss_pred HHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHH-HcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccCCCC
Q 001292 436 DVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVAS-RLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQVE 512 (1106)
Q Consensus 436 A~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLae-klGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~~Ee 512 (1106)
|++.+. .+++ |+++|.++.. ..+.+.+. .+++.+ +|+++|+. +++..+|..||++++||...
T Consensus 214 a~~~l~----------~~~~-l~ivG~~~~~--~~~~~~~~~~~~~~~-~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~- 278 (363)
T cd04955 214 AFSKSN----------SGKK-LVIVGNADHN--TPYGKLLKEKAAADP-RIIFVGPIYDQELLELLRYAALFYLHGHSV- 278 (363)
T ss_pred HHHhhc----------cCce-EEEEcCCCCc--chHHHHHHHHhCCCC-cEEEccccChHHHHHHHHhCCEEEeCCccC-
Confidence 997653 2567 6888988654 44544444 677776 89999954 67899999999999999982
Q ss_pred CCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhc-H
Q 001292 513 QGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNML-A 591 (1106)
Q Consensus 513 EGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~f-s 591 (1106)
|+||++++||||||+|||+++.++..|++.+ +|.++++.|+ ++++|..+++|++. +.++++++++.+.+.| |
T Consensus 279 e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~~~~---~~~~~~~~~~~~~~~fs~ 351 (363)
T cd04955 279 GGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELEADPEE---VSAMAKAARERIREKYTW 351 (363)
T ss_pred CCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHHhCHHH---HHHHHHHHHHHHHHhCCH
Confidence 4999999999999999999999999999955 7888887765 99999999999977 6889999999988755 5
Q ss_pred HHHHHHHHHHHH
Q 001292 592 LDCVTRYARILE 603 (1106)
Q Consensus 592 ee~v~~Y~eLye 603 (1106)
+.++++|.++|+
T Consensus 352 ~~~~~~~~~~y~ 363 (363)
T cd04955 352 EKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHHhC
Confidence 666669998874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-27 Score=260.93 Aligned_cols=334 Identities=17% Similarity=0.151 Sum_probs=244.0
Q ss_pred EEEEEeCCCCC---ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchH----------------------HHHHHhHHHHH
Q 001292 224 RIGLILGNMAK---DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS----------------------LWEQIAGQISI 278 (1106)
Q Consensus 224 RIalVlg~L~~---gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~----------------------i~r~lg~lvki 278 (1106)
||++++..+.. ||.+..+..++++|.+.|++|++++...+.... ...........
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLLFLLRAGDRLL 80 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhccccccccccccccchhhHHHHHHHHH
Confidence 57888888766 999999999999999999999999875432110 00111112334
Q ss_pred hhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEE
Q 001292 279 LGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358 (1106)
Q Consensus 279 Ir~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VI 358 (1106)
+...++|++|.+.....+. . ..++|+|+++|+.........................++.+|.++
T Consensus 81 ~~~~~~Dii~~~~~~~~~~----~-----------~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 145 (365)
T cd03809 81 LLLLGLDLLHSPHNTAPLL----R-----------LRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAII 145 (365)
T ss_pred hhhcCCCeeeecccccCcc----c-----------CCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEE
Confidence 4446788888876665444 1 368999999998421111111010001111222345678999999
Q ss_pred ecCCChhhh---hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHH
Q 001292 359 FPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMH 435 (1106)
Q Consensus 359 a~S~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLe 435 (1106)
+.+...... ..+.+..++.++|| |+|. ..+.+..... +.......+.++|+++|++.+ .||.+.+++
T Consensus 146 ~~s~~~~~~~~~~~~~~~~~~~vi~~-~~~~---~~~~~~~~~~--~~~~~~~~~~~~i~~~G~~~~----~K~~~~~l~ 215 (365)
T cd03809 146 TVSEATKRDLLRYLGVPPDKIVVIPL-GVDP---RFRPPPAEAE--VLRALYLLPRPYFLYVGTIEP----RKNLERLLE 215 (365)
T ss_pred EccHHHHHHHHHHhCcCHHHEEeecc-ccCc---cccCCCchHH--HHHHhcCCCCCeEEEeCCCcc----ccCHHHHHH
Confidence 998765554 23445678999998 7887 4443332222 334455667889999999887 899999999
Q ss_pred HHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccCCCCC
Q 001292 436 DVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQ 513 (1106)
Q Consensus 436 A~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~~EeE 513 (1106)
++..+.+.. ++++ |+++|.+...+ ....+.++.+++.+ +|++.|.. +++..+|+.||++++||..|
T Consensus 216 ~~~~~~~~~-------~~~~-l~i~G~~~~~~-~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e-- 283 (365)
T cd03809 216 AFARLPAKG-------PDPK-LVIVGKRGWLN-EELLARLRELGLGD-RVRFLGYVSDEELAALYRGARAFVFPSLYE-- 283 (365)
T ss_pred HHHHHHHhc-------CCCC-EEEecCCcccc-HHHHHHHHHcCCCC-eEEECCCCChhHHHHHHhhhhhhcccchhc--
Confidence 998876432 4566 57788765542 33444446778887 99999966 78999999999999999886
Q ss_pred CCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHH
Q 001292 514 GFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALD 593 (1106)
Q Consensus 514 GFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee 593 (1106)
++|++++||||+|+|||+++.+++.|++ +.+|+++++.|+++++++|.++++|++. +.++++++++.++++.|+.
T Consensus 284 ~~~~~~~Ea~a~G~pvI~~~~~~~~e~~--~~~~~~~~~~~~~~~~~~i~~l~~~~~~---~~~~~~~~~~~~~~~sw~~ 358 (365)
T cd03809 284 GFGLPVLEAMACGTPVIASNISSLPEVA--GDAALYFDPLDPEALAAAIERLLEDPAL---REELRERGLARAKRFSWEK 358 (365)
T ss_pred cCCCCHHHHhcCCCcEEecCCCCcccee--cCceeeeCCCCHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999999998 4579999999999999999999999988 6889999998888888888
Q ss_pred HHHHHH
Q 001292 594 CVTRYA 599 (1106)
Q Consensus 594 ~v~~Y~ 599 (1106)
.+++|.
T Consensus 359 ~~~~~~ 364 (365)
T cd03809 359 TARRTL 364 (365)
T ss_pred HHHHHh
Confidence 877664
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-26 Score=253.03 Aligned_cols=318 Identities=16% Similarity=0.183 Sum_probs=232.8
Q ss_pred EEEEEeCCCCC---ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHH-------------------------H------
Q 001292 224 RIGLILGNMAK---DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSL-------------------------W------ 269 (1106)
Q Consensus 224 RIalVlg~L~~---gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i-------------------------~------ 269 (1106)
||+++.+.... +|.+.++..++++|.++|++|++++......... +
T Consensus 1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T cd03823 1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVIGVVVYGRPIDEVLRSALPRDLFHLSDYD 80 (359)
T ss_pred CeeEEcccCCcccccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccccceeeccccccccCCCchhhhhHHHhcc
Confidence 57888777655 6899999999999999999999998754321000 0
Q ss_pred --HHHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHH
Q 001292 270 --EQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYW 347 (1106)
Q Consensus 270 --r~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~ 347 (1106)
.....+.++++..++|+||.+.+.......+.... ..++|+|+++|+..... +. ..
T Consensus 81 ~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~---------~~~~~~i~~~hd~~~~~-----~~---~~----- 138 (359)
T cd03823 81 NPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAAR---------DRGIPIVLTLHDYWLIC-----PR---QG----- 138 (359)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCccchHHHHHHHHH---------hcCCCEEEEEeeeeeec-----ch---hh-----
Confidence 01112456677789999999876433222221111 25689999999852110 00 00
Q ss_pred HHHhccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCcccc
Q 001292 348 KSVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNE 425 (1106)
Q Consensus 348 ~~~l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~k 425 (1106)
......|.+++.+...... ..+....++.+|+| |+|. ..+.+... +.+.+.++++++|++..
T Consensus 139 -~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~n-~~~~---~~~~~~~~--------~~~~~~~~i~~~G~~~~--- 202 (359)
T cd03823 139 -LFKKGGDAVIAPSRFLLDRYVANGLFAEKISVIRN-GIDL---DRAKRPRR--------APPGGRLRFGFIGQLTP--- 202 (359)
T ss_pred -hhccCCCEEEEeCHHHHHHHHHcCCCccceEEecC-CcCh---hhcccccc--------CCCCCceEEEEEecCcc---
Confidence 1112338889888665554 22334568999998 7887 33332211 34567789999999877
Q ss_pred ccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCe
Q 001292 426 LSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADI 503 (1106)
Q Consensus 426 g~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADV 503 (1106)
.|+.+.++++++.+.. ++++ ++++|.++.. ....... +..+ +|.+.|+. +++..+|+.||+
T Consensus 203 -~k~~~~li~~~~~l~~---------~~~~-l~i~G~~~~~--~~~~~~~---~~~~-~v~~~g~~~~~~~~~~~~~ad~ 265 (359)
T cd03823 203 -HKGVDLLLEAFKRLPR---------GDIE-LVIVGNGLEL--EEESYEL---EGDP-RVEFLGAYPQEEIDDFYAEIDV 265 (359)
T ss_pred -ccCHHHHHHHHHHHHh---------cCcE-EEEEcCchhh--hHHHHhh---cCCC-eEEEeCCCCHHHHHHHHHhCCE
Confidence 8899999999987652 4667 6888988764 3332222 4555 89999976 899999999999
Q ss_pred EEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Q 001292 504 VLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGR 583 (1106)
Q Consensus 504 fV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Ar 583 (1106)
+++||... |++|++++|||+||+|||+++.+++.+++.++.+|++++++|+++++++|..+++|++. .++++++++
T Consensus 266 ~i~ps~~~-e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~---~~~~~~~~~ 341 (359)
T cd03823 266 LVVPSIWP-ENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDL---LERLRAGIE 341 (359)
T ss_pred EEEcCccc-CCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHH---HHHHHHhHH
Confidence 99999742 49999999999999999999999999999998899999999999999999999999987 688888888
Q ss_pred HHHHHhcHHHHHHHHHHHHH
Q 001292 584 LHAKNMLALDCVTRYARILE 603 (1106)
Q Consensus 584 e~ake~fsee~v~~Y~eLye 603 (1106)
+.... +..+++|.++|+
T Consensus 342 ~~~~~---~~~~~~~~~~~~ 358 (359)
T cd03823 342 PPRSI---EDQAEEYLKLYR 358 (359)
T ss_pred HhhhH---HHHHHHHHHHhh
Confidence 87755 566668888875
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-26 Score=248.53 Aligned_cols=339 Identities=17% Similarity=0.178 Sum_probs=244.0
Q ss_pred EEEEEeCCCCC--ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchH--------------------------------HH
Q 001292 224 RIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS--------------------------------LW 269 (1106)
Q Consensus 224 RIalVlg~L~~--gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~--------------------------------i~ 269 (1106)
||++|.+.+.. +|.+..+..++++|++.|++|++++........ ..
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYKKNGLLKRLL 80 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCceEEEEecCCCcccccccccceEEecCCeEEEEEecCCCCccchHHHHH
Confidence 58888888776 789999999999999999999999864321100 00
Q ss_pred HHH---hHHHHHh--hccCccEEEEccccH--HHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccc----chhhhhh
Q 001292 270 EQI---AGQISIL--GQEQYSLIDWSIFDG--IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANR----LPVYVER 338 (1106)
Q Consensus 270 r~l---g~lvkiI--r~~~pDiIh~~~~~~--i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r----~~~Y~~~ 338 (1106)
... ......+ +..++|+|+++.... .+......+ ..++|+|+++|+...... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~----------~~~~~~i~~~h~~~~~~~~~~~~~~~~~- 149 (394)
T cd03794 81 NYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLAR----------LKGAPFVLEVRDLWPESAVALGLLKNGS- 149 (394)
T ss_pred hhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHH----------hcCCCEEEEehhhcchhHHHccCccccc-
Confidence 100 0112222 367899999986222 122222221 257899999998311100 000000
Q ss_pred hHHhHHHH-HHHHhccccEEEecCCChhhhh--cCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEE
Q 001292 339 GFQNLLSY-WKSVFSRVNVIVFPDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVV 415 (1106)
Q Consensus 339 gleklis~-~~~~l~~AD~VIa~S~~~~~~~--~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL 415 (1106)
...++... ....++.+|.+++.+....... .+.+..++.++|| ++|. ..+.+...... +.......+.++++
T Consensus 150 ~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~-~~~~---~~~~~~~~~~~-~~~~~~~~~~~~i~ 224 (394)
T cd03794 150 LLYRLLRKLERLIYRRADAIVVISPGMREYLVRRGVPPEKISVIPN-GVDL---ELFKPPPADES-LRKELGLDDKFVVL 224 (394)
T ss_pred hHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCCcCceEEcCC-CCCH---HHcCCccchhh-hhhccCCCCcEEEE
Confidence 00011111 1345789999999997776664 5677789999998 6886 44443322222 44455667888999
Q ss_pred EEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hh
Q 001292 416 VVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GD 493 (1106)
Q Consensus 416 ~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eD 493 (1106)
++|++.. .|+.+.+++++..+.+ . ++++ |+++|.++.. +.+++++...+++ +|.+.|.. ++
T Consensus 225 ~~G~~~~----~k~~~~l~~~~~~l~~-------~-~~~~-l~i~G~~~~~--~~~~~~~~~~~~~--~v~~~g~~~~~~ 287 (394)
T cd03794 225 YAGNIGR----AQGLDTLLEAAALLKD-------R-PDIR-FLIVGDGPEK--EELKELAKALGLD--NVTFLGRVPKEE 287 (394)
T ss_pred EecCccc----ccCHHHHHHHHHHHhh-------c-CCeE-EEEeCCcccH--HHHHHHHHHcCCC--cEEEeCCCChHH
Confidence 9998877 8999999999987753 1 5777 6889998875 8888877777776 69999954 78
Q ss_pred HHHHHHHcCeEEEccCCC---CCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 001292 494 VNGVLLMADIVLYGSSQV---EQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 570 (1106)
Q Consensus 494 L~~LyaaADVfV~PS~~E---eEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpe 570 (1106)
+..+|+.||++++|+..+ +.++|++++|||++|+|||+++.++..+++.++.+|++++++|+++++++|.++++|++
T Consensus 288 ~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~ 367 (394)
T cd03794 288 LPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPE 367 (394)
T ss_pred HHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChH
Confidence 999999999999999876 22458899999999999999999999999988889999999999999999999999998
Q ss_pred cHHHHHHHHHHHHHHHHHhcHH-HHHHHH
Q 001292 571 LSKFARTVASAGRLHAKNMLAL-DCVTRY 598 (1106)
Q Consensus 571 lRk~r~~mGe~Are~ake~fse-e~v~~Y 598 (1106)
. +.++++++++.+.+.|+. ..+++|
T Consensus 368 ~---~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 368 E---RAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred H---HHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 7 688999999999966654 444454
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.7e-26 Score=262.71 Aligned_cols=340 Identities=13% Similarity=0.046 Sum_probs=229.6
Q ss_pred CCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCC-chHHH---------------------H---H-----
Q 001292 222 PPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN-SHSLW---------------------E---Q----- 271 (1106)
Q Consensus 222 ~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~-~~~i~---------------------r---~----- 271 (1106)
.+||++++.. . .|....+..+++.|.++||+|+|++..... ..... . .
T Consensus 3 ~~~~~~~~~~-~-~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (415)
T cd03816 3 RKRVCVLVLG-D-IGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEILSNPNITIHPLPPPPQRLNKLPFLLFAPLKVL 80 (415)
T ss_pred ccEEEEEEec-c-cCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHHHhcCCCEEEEECCCCccccccchHHHHHHHHHH
Confidence 4566665542 2 344444577999999999999999864321 10000 0 0
Q ss_pred ---HhHHHHHhhccCccEEEEccccHH---HHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccc-chhhhhhhHHhHH
Q 001292 272 ---IAGQISILGQEQYSLIDWSIFDGI---IADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANR-LPVYVERGFQNLL 344 (1106)
Q Consensus 272 ---lg~lvkiIr~~~pDiIh~~~~~~i---~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r-~~~Y~~~glekli 344 (1106)
++....+++..++|+||.+..... +...+..+. .++|+|++.|+...... ........+.++.
T Consensus 81 ~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~----------~~~~~V~~~h~~~~~~~~~~~~~~~~~~~~~ 150 (415)
T cd03816 81 WQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLL----------RRTKLIIDWHNYGYTILALKLGENHPLVRLA 150 (415)
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH----------hCCeEEEEcCCchHHHHhcccCCCCHHHHHH
Confidence 010111345568999998764432 223333322 57899999998521100 0000000011122
Q ss_pred HHH-HHHhccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHH---HHHH-------------Hc
Q 001292 345 SYW-KSVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKY---QLRK-------------EN 405 (1106)
Q Consensus 345 s~~-~~~l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~---~LR~-------------~l 405 (1106)
..+ +..++.+|.|++.|....+. ..+.+++++.|||| +.+ ..|.+..... ..+. ..
T Consensus 151 ~~~e~~~~~~ad~ii~vS~~~~~~l~~~~~~~~ki~vI~N-g~~----~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (415)
T cd03816 151 KWYEKLFGRLADYNLCVTKAMKEDLQQFNNWKIRATVLYD-RPP----EQFRPLPLEEKHELFLKLAKTFLTRELRIGAV 225 (415)
T ss_pred HHHHHHHhhcCCEeeecCHHHHHHHHhhhccCCCeeecCC-CCH----HHceeCcHHHHHHHHHhccccccccccccccc
Confidence 222 13467899999999776654 34577899999998 443 3555532211 1111 11
Q ss_pred CC-CCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCc
Q 001292 406 GF-LKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHS 484 (1106)
Q Consensus 406 GL-~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~r 484 (1106)
++ +++..+++++||+.. .||++.+++|++.+.+.... ....|+++ |+|+|+|+.+ +.++++++++++.+ .
T Consensus 226 ~~~~~~~~vi~~~grl~~----~K~~~~li~A~~~l~~~~~~-~~~~~~i~-l~ivG~G~~~--~~l~~~~~~~~l~~-~ 296 (415)
T cd03816 226 QLSEERPALLVSSTSWTP----DEDFGILLDALVAYEKSAAT-GPKLPKLL-CIITGKGPLK--EKYLERIKELKLKK-V 296 (415)
T ss_pred eecCCCceEEEEeccccC----CCCHHHHHHHHHHHHHhhcc-cccCCCEE-EEEEecCccH--HHHHHHHHHcCCCc-E
Confidence 22 234567888999887 89999999999887643211 12237888 6889999976 99999999999985 5
Q ss_pred EEEcCC--hhhHHHHHHHcCeEEEccC-CCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHH
Q 001292 485 VRHYGF--NGDVNGVLLMADIVLYGSS-QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRA 561 (1106)
Q Consensus 485 V~flG~--~eDL~~LyaaADVfV~PS~-~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeA 561 (1106)
+.+.|+ .+++..+|++||++++++. ..++++|++++||||||+|||+++.+++.|+|.++.+|++++ |+++|+++
T Consensus 297 ~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~ 374 (415)
T cd03816 297 TIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQ 374 (415)
T ss_pred EEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHH
Confidence 556674 5899999999999997532 112489999999999999999999999999999999999994 89999999
Q ss_pred HHHHHhC---cccHHHHHHHHHHHHHHHHHhcHH
Q 001292 562 FSLFISN---GKLSKFARTVASAGRLHAKNMLAL 592 (1106)
Q Consensus 562 I~~LLsD---pelRk~r~~mGe~Are~ake~fse 592 (1106)
|..+++| ++. +++|+++|++.++..++.
T Consensus 375 i~~ll~~~~~~~~---~~~m~~~~~~~~~~~~~~ 405 (415)
T cd03816 375 LIDLLSNFPNRGK---LNSLKKGAQEESELRWDE 405 (415)
T ss_pred HHHHHhcCCCHHH---HHHHHHHHHHhhhcCHHH
Confidence 9999999 666 689999999998665543
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=283.35 Aligned_cols=285 Identities=14% Similarity=0.097 Sum_probs=206.5
Q ss_pred CccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccc----------hhhhhhhHHhHHHHHHHHhc
Q 001292 283 QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRL----------PVYVERGFQNLLSYWKSVFS 352 (1106)
Q Consensus 283 ~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~----------~~Y~~~gleklis~~~~~l~ 352 (1106)
.||+||.|.+++.+++.+.++. .++|++.|.|.....+.. ..|.. ..++... ..+++
T Consensus 408 ~PDlIHaHYwdsg~vA~~La~~----------lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~--~~r~~aE-~~a~~ 474 (815)
T PLN00142 408 KPDLIIGNYSDGNLVASLLAHK----------LGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF--SCQFTAD-LIAMN 474 (815)
T ss_pred CCCEEEECCccHHHHHHHHHHH----------hCCCEEEEcccchhhhccccCCcccccchhhhh--hhchHHH-HHHHH
Confidence 5999999999999988888764 689999999973222111 01110 0111111 23567
Q ss_pred cccEEEecCCChhh--------h--------------hcCCC--CCCEEEeCCCCCCcccccccCcchhH-H--------
Q 001292 353 RVNVIVFPDYTLPM--------L--------------YSVLD--AGNFFVIPGSPADVWAVEAYSKSHEK-Y-------- 399 (1106)
Q Consensus 353 ~AD~VIa~S~~~~~--------~--------------~~gi~--~~KI~VIpN~GVDl~~~e~F~ps~s~-~-------- 399 (1106)
.||.||+.+..... . ..+++ ..++.+||+ |+|. ..|.|-... .
T Consensus 475 ~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVpp-GvD~---~~F~P~~~~~~rl~~l~n~ 550 (815)
T PLN00142 475 HADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADM---SIYFPYTEKQKRLTSLHPS 550 (815)
T ss_pred hhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECC-CCCh---hhcCCCChHHhhHHhhccc
Confidence 88888877743321 0 11222 448889996 8998 556542211 1
Q ss_pred ---------HHHHHcCC--CCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCC----
Q 001292 400 ---------QLRKENGF--LKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNST---- 464 (1106)
Q Consensus 400 ---------~LR~~lGL--~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gp---- 464 (1106)
..++.+|+ .+++++|+++||+.+ .||++.+++|+.++... .++++ |+|+|.+.
T Consensus 551 I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~----~KGid~LIeA~a~l~~l-------~~~~~-LVIVGgg~d~~~ 618 (815)
T PLN00142 551 IEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDR----VKNLTGLVEWYGKNKRL-------RELVN-LVVVGGFIDPSK 618 (815)
T ss_pred chhhcCChHHHHHHhCCccCCCCcEEEEEecCcc----cCCHHHHHHHHHHHHHh-------CCCcE-EEEEECCccccc
Confidence 12345665 456789999999998 99999999999766421 25677 56777652
Q ss_pred --Cc----cHHHHHHHHHHcCCCCCcEEEcCCh------hhHHHHHH-HcCeEEEccCCCCCCCcHHHHHHHHhCCCEEe
Q 001292 465 --DG----YNDALQEVASRLGLLEHSVRHYGFN------GDVNGVLL-MADIVLYGSSQVEQGFPSLIVRAMTFGIPVIT 531 (1106)
Q Consensus 465 --er----Y~eeLkeLaeklGL~d~rV~flG~~------eDL~~Lya-aADVfV~PS~~EeEGFGlvLLEAMA~G~PVIA 531 (1106)
.. +...+.++++++++.+ +|.|+|.. +++..+++ ++|+||+||.+| +||++++||||||+|||+
T Consensus 619 s~d~ee~~el~~L~~La~~lgL~~-~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~E--gFGLvvLEAMA~GlPVVA 695 (815)
T PLN00142 619 SKDREEIAEIKKMHSLIEKYNLKG-QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYE--AFGLTVVEAMTCGLPTFA 695 (815)
T ss_pred cccHHHHHHHHHHHHHHHHcCCCC-cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCccc--CCCHHHHHHHHcCCCEEE
Confidence 11 1235778899999997 99999843 34556666 479999999987 999999999999999999
Q ss_pred cCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHH----hCcccHHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHH
Q 001292 532 PDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI----SNGKLSKFARTVASAGRLHAKNML-ALDCVTRYARIL 602 (1106)
Q Consensus 532 SD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LL----sDpelRk~r~~mGe~Are~ake~f-see~v~~Y~eLy 602 (1106)
++.||+.|+|.++.+|+++++.|+++++++|..++ +|+++ +.+|+++|++.+.+.| |+..++++.++.
T Consensus 696 TdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~l---r~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 696 TCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSY---WNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred cCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999997654 68887 6899999999986655 455566887765
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-25 Score=262.05 Aligned_cols=333 Identities=11% Similarity=0.091 Sum_probs=234.0
Q ss_pred CCCEEEEEeCCCCC--ChhHHHHHHHHHHHHHCC-CEEEEEEcCCCCc------------------h---------HH--
Q 001292 221 RPPRIGLILGNMAK--DSRSLLLITVVKNLQKLG-YVFKIYAVRSGNS------------------H---------SL-- 268 (1106)
Q Consensus 221 r~~RIalVlg~L~~--gGesl~vv~LakaLqe~G-yeVtV~t~~dg~~------------------~---------~i-- 268 (1106)
.++|||+|+....+ +|.......++..|+++| |+|+|+.+..... + .+
T Consensus 3 ~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~v~r 82 (462)
T PLN02846 3 KKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEERISF 82 (462)
T ss_pred CCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCeEEE
Confidence 46899999999987 899889999999999999 7999997732100 0 00
Q ss_pred --------HHH-----------HhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccc
Q 001292 269 --------WEQ-----------IAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLA 329 (1106)
Q Consensus 269 --------~r~-----------lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls 329 (1106)
+.. .+.+.+.++..++|+||.+.....-......+... +..++|.++|....
T Consensus 83 ~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~--------k~~~vV~tyHT~y~- 153 (462)
T PLN02846 83 LPKFSIKFYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKT--------KFRLVIGIVHTNYL- 153 (462)
T ss_pred ecccccccCcccccccccccCChHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHh--------cCCcEEEEECCChH-
Confidence 001 12255677778999999987665444211222221 22458888999431
Q ss_pred ccchhhh----hhhHHhHHHHHHHHhccccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHc
Q 001292 330 NRLPVYV----ERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKEN 405 (1106)
Q Consensus 330 ~r~~~Y~----~~gleklis~~~~~l~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~l 405 (1106)
..+.+|. ...+.+.+..|...+ .+|.+++++....... . .+.+.++ |||. +.|.+.... .++.+
T Consensus 154 ~Y~~~~~~g~~~~~l~~~~~~~~~r~-~~d~vi~pS~~~~~l~----~-~~i~~v~-GVd~---~~f~~~~~~--~~~~~ 221 (462)
T PLN02846 154 EYVKREKNGRVKAFLLKYINSWVVDI-YCHKVIRLSAATQDYP----R-SIICNVH-GVNP---KFLEIGKLK--LEQQK 221 (462)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHH-hcCEEEccCHHHHHHh----h-CEEecCc-eech---hhcCCCccc--Hhhhc
Confidence 1111221 111122233332222 4899999996443321 1 2334344 8998 666654322 33333
Q ss_pred CCCCC--cEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCC
Q 001292 406 GFLKD--EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEH 483 (1106)
Q Consensus 406 GL~~d--~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~ 483 (1106)
+ .++ .++++++||+.. +||++.+++|++.+.+.. |+++ |+|+|+||++ +++++++.++++..
T Consensus 222 ~-~~~~~~~~~l~vGRL~~----eK~~~~Li~a~~~l~~~~-------~~~~-l~ivGdGp~~--~~L~~~a~~l~l~~- 285 (462)
T PLN02846 222 N-GEQAFTKGAYYIGKMVW----SKGYKELLKLLHKHQKEL-------SGLE-VDLYGSGEDS--DEVKAAAEKLELDV- 285 (462)
T ss_pred C-CCCCcceEEEEEecCcc----cCCHHHHHHHHHHHHhhC-------CCeE-EEEECCCccH--HHHHHHHHhcCCcE-
Confidence 3 334 347899999998 999999999998776422 6787 7899999987 99999999999874
Q ss_pred cEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHH
Q 001292 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFS 563 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~ 563 (1106)
+| |.|. .+..++|+.+|+||+||..| +||++++||||||+|||+++.++ .+++.++.+|+++ .|+++++++|.
T Consensus 286 ~v-f~G~-~~~~~~~~~~DvFv~pS~~E--t~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~a~ai~ 358 (462)
T PLN02846 286 RV-YPGR-DHADPLFHDYKVFLNPSTTD--VVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTY--DDGKGFVRATL 358 (462)
T ss_pred EE-ECCC-CCHHHHHHhCCEEEECCCcc--cchHHHHHHHHcCCcEEEecCCC-cceeecCCceEec--CCHHHHHHHHH
Confidence 44 8885 35568999999999999987 99999999999999999999998 5999999999888 58999999999
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 001292 564 LFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENV 605 (1106)
Q Consensus 564 ~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyesl 605 (1106)
.+++++.. .++.+++ +.+.|+.+++++.++|+--
T Consensus 359 ~~l~~~~~-----~~~~~a~---~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 359 KALAEEPA-----PLTDAQR---HELSWEAATERFLRVADLD 392 (462)
T ss_pred HHHccCch-----hHHHHHH---HhCCHHHHHHHHHHHhccC
Confidence 99986532 1222332 4778888888999999854
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.1e-26 Score=266.18 Aligned_cols=231 Identities=15% Similarity=0.029 Sum_probs=179.0
Q ss_pred HhccccEEEecCCChhhh-hc-CCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCcccccc
Q 001292 350 VFSRVNVIVFPDYTLPML-YS-VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELS 427 (1106)
Q Consensus 350 ~l~~AD~VIa~S~~~~~~-~~-gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~ 427 (1106)
+.+.+|.|++.|...... .. ...+.++.++++ |+|. +.+.... ....++..+++++||+.+ .
T Consensus 217 ~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp-~vd~---~~~~~~~--------~~~~~~~~~il~vGR~~~----~ 280 (463)
T PLN02949 217 VGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYP-PCDT---SGLQALP--------LERSEDPPYIISVAQFRP----E 280 (463)
T ss_pred HcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcC-CCCH---HHcccCC--------ccccCCCCEEEEEEeeec----c
Confidence 457899999998665544 11 112347888887 6776 3332111 001234568999999988 8
Q ss_pred CCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCC----ccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHc
Q 001292 428 WDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD----GYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMA 501 (1106)
Q Consensus 428 Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gpe----rY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaA 501 (1106)
||++.+|+|+..+.++. ....|+++ |+|+|+++. .|.++++++++++|+.+ +|.|+|.. +++..+|+.|
T Consensus 281 Kg~~llI~A~~~l~~~~---~~~~~~~~-LvIvG~~~~~~~~~~~~eL~~la~~l~L~~-~V~f~g~v~~~el~~ll~~a 355 (463)
T PLN02949 281 KAHALQLEAFALALEKL---DADVPRPK-LQFVGSCRNKEDEERLQKLKDRAKELGLDG-DVEFHKNVSYRDLVRLLGGA 355 (463)
T ss_pred CCHHHHHHHHHHHHHhc---cccCCCcE-EEEEeCCCCcccHHHHHHHHHHHHHcCCCC-cEEEeCCCCHHHHHHHHHhC
Confidence 99999999998876432 12347788 688887642 24578999999999998 99999955 7899999999
Q ss_pred CeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCch-hhhcc---CCeEEEEcCCCHHHHHHHHHHHHhC-cccHHHHH
Q 001292 502 DIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK-EYVAE---GAQVIFFQKDNPEGLSRAFSLFISN-GKLSKFAR 576 (1106)
Q Consensus 502 DVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~-EiV~D---g~nG~LV~~~D~eeLAeAI~~LLsD-pelRk~r~ 576 (1106)
|++++||..| +||++++||||+|+|||++|.||.. +++.+ +.+|++++ |+++++++|.+++++ ++. ++
T Consensus 356 ~~~v~~s~~E--~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~---r~ 428 (463)
T PLN02949 356 VAGLHSMIDE--HFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETE---RL 428 (463)
T ss_pred cEEEeCCccC--CCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHH---HH
Confidence 9999999876 9999999999999999999999975 66655 56898874 999999999999985 444 67
Q ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC
Q 001292 577 TVASAGRLHAKNMLALDCVTRYARILENVLNF 608 (1106)
Q Consensus 577 ~mGe~Are~ake~fsee~v~~Y~eLyeslLk~ 608 (1106)
+|+++|++.++++.++...+++.+.++++++.
T Consensus 429 ~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~ 460 (463)
T PLN02949 429 EIAAAARKRANRFSEQRFNEDFKDAIRPILNS 460 (463)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhh
Confidence 89999999997766666677999999988763
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=253.78 Aligned_cols=341 Identities=16% Similarity=0.109 Sum_probs=221.3
Q ss_pred EEEEEeCCCCCC-hhHHHHHHHHHHHHHC--CCEEEEEEcCCCCch-HHHHHHhHHHHHhhccCc---cEEEE-------
Q 001292 224 RIGLILGNMAKD-SRSLLLITVVKNLQKL--GYVFKIYAVRSGNSH-SLWEQIAGQISILGQEQY---SLIDW------- 289 (1106)
Q Consensus 224 RIalVlg~L~~g-Gesl~vv~LakaLqe~--GyeVtV~t~~dg~~~-~i~r~lg~lvkiIr~~~p---DiIh~------- 289 (1106)
.|+|++++++.| |.+..+...+.+|++. +++|+|+|....... .+....+. .+..... .++..
T Consensus 2 ~~~f~hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~---~f~~~~~~~~~~~~~~~~~~~~ 78 (419)
T cd03806 2 TVGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVES---RFNIELDRPRIVFFLLKYRKLV 78 (419)
T ss_pred eEEEECCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHH---hcCeecCCCceEEEEecceeee
Confidence 479999999997 9999999999999999 899999987543322 22221111 1111000 00000
Q ss_pred --c------ccc---HHHHHHHHH--HHhhhhcccCC-----------CCCCcEEEEEcCCccc-ccc------------
Q 001292 290 --S------IFD---GIIADSLEA--KEAISSLMQEP-----------FHSIPLVWIIQEDSLA-NRL------------ 332 (1106)
Q Consensus 290 --~------~~~---~i~v~~La~--k~~idII~te~-----------~~gIPVI~tIHna~Ls-~r~------------ 332 (1106)
. ... ..++..+.. +...|++..+. ..++|+|..+|--..+ ..+
T Consensus 79 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~ 158 (419)
T cd03806 79 EASTYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNN 158 (419)
T ss_pred ccccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccC
Confidence 0 000 000111111 11123333222 3477999999942100 000
Q ss_pred ----hhhhhhhHHhHH------HHHHHHhccccEEEecCCChhhhh-cCC-CCCCEEEeCCCCCCcccccccCcchhHHH
Q 001292 333 ----PVYVERGFQNLL------SYWKSVFSRVNVIVFPDYTLPMLY-SVL-DAGNFFVIPGSPADVWAVEAYSKSHEKYQ 400 (1106)
Q Consensus 333 ----~~Y~~~glekli------s~~~~~l~~AD~VIa~S~~~~~~~-~gi-~~~KI~VIpN~GVDl~~~e~F~ps~s~~~ 400 (1106)
.........+.+ ..+...++.+|.++++|....... ... ...++.+|++ |+|+ +.|.+...
T Consensus 159 ~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~-gvd~---~~~~~~~~--- 231 (419)
T cd03806 159 SATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYP-PCDV---EELLKLPL--- 231 (419)
T ss_pred ccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcC-CCCH---HHhccccc---
Confidence 000000011111 122345789999999986655442 111 2247889997 7887 44433211
Q ss_pred HHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCC----ccHHHHHHHHH
Q 001292 401 LRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD----GYNDALQEVAS 476 (1106)
Q Consensus 401 LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gpe----rY~eeLkeLae 476 (1106)
....+.++|+++||+.+ .||++.+++|+..+.++..... .++++ |+|+|.+.. .|.++++++++
T Consensus 232 -----~~~~~~~~il~vgr~~~----~K~~~~li~A~~~l~~~~~~~~--~~~~~-lvivG~~~~~~~~~~~~~L~~~~~ 299 (419)
T cd03806 232 -----DEKTRENQILSIAQFRP----EKNHPLQLRAFAKLLKRLPEEI--KEKIK-LVLIGSCRNEDDEKRVEDLKLLAK 299 (419)
T ss_pred -----ccccCCcEEEEEEeecC----CCCHHHHHHHHHHHHHhCcccc--cCceE-EEEEcCCCCcccHHHHHHHHHHHH
Confidence 11345679999999988 8999999999998875432111 24687 688887642 24678899999
Q ss_pred HcCCCCCcEEEcCC--hhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCc-hhhhc---cCCeEEEE
Q 001292 477 RLGLLEHSVRHYGF--NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPII-KEYVA---EGAQVIFF 550 (1106)
Q Consensus 477 klGL~d~rV~flG~--~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI-~EiV~---Dg~nG~LV 550 (1106)
++++.+ +|+|+|. .+++..+|+.||++++||..| +||++++||||||+|||+++.+|. .+++. ++.+|+++
T Consensus 300 ~l~l~~-~V~f~g~v~~~~l~~~l~~adv~v~~s~~E--~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~ 376 (419)
T cd03806 300 ELGLED-KVEFVVNAPFEELLEELSTASIGLHTMWNE--HFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA 376 (419)
T ss_pred HhCCCC-eEEEecCCCHHHHHHHHHhCeEEEECCccC--CcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe
Confidence 999987 9999995 578999999999999999886 999999999999999999999875 57777 78999997
Q ss_pred cCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHH
Q 001292 551 QKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDC 594 (1106)
Q Consensus 551 ~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~ 594 (1106)
+ |+++++++|.+++++++.. ++.++.++++ +.+.|+.+.
T Consensus 377 ~--d~~~la~ai~~ll~~~~~~--~~~~~~~~~~-~~~~fs~~~ 415 (419)
T cd03806 377 S--TAEEYAEAIEKILSLSEEE--RLRIRRAARS-SVKRFSDEE 415 (419)
T ss_pred C--CHHHHHHHHHHHHhCCHHH--HHHHHHHHHH-HHHhhCHHH
Confidence 4 9999999999999987642 3445545554 556666544
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-25 Score=262.02 Aligned_cols=283 Identities=11% Similarity=0.100 Sum_probs=206.9
Q ss_pred HHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccc
Q 001292 275 QISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRV 354 (1106)
Q Consensus 275 lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~A 354 (1106)
..+.+...++|++++..........+.. ...+|++.++|+.-+...........+...........+.+
T Consensus 203 f~~~L~~~~~di~i~dr~~~~~~~~~~~-----------~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~ 271 (500)
T TIGR02918 203 FLKQLNLTKKDIIILDRSTGIGQAVLEN-----------KGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYI 271 (500)
T ss_pred HHHHHhCCCCCEEEEcCCcccchHHHhc-----------CCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhC
Confidence 3344445678888886544322222221 25689999999843222111000000011111112235678
Q ss_pred cEEEecCCChhhh----h--cCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccC
Q 001292 355 NVIVFPDYTLPML----Y--SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSW 428 (1106)
Q Consensus 355 D~VIa~S~~~~~~----~--~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~K 428 (1106)
|.+|+++...... . .+.+..++.+||+ |++. ..+.+. ...+..+|+++||+.+ .|
T Consensus 272 D~iI~~S~~~~~~l~~~~~~~~~~~~ki~viP~-g~~~---~~~~~~-----------~~r~~~~il~vGrl~~----~K 332 (500)
T TIGR02918 272 DFFITATDIQNQILKNQFKKYYNIEPRIYTIPV-GSLD---ELQYPE-----------QERKPFSIITASRLAK----EK 332 (500)
T ss_pred CEEEECCHHHHHHHHHHhhhhcCCCCcEEEEcC-CCcc---cccCcc-----------cccCCeEEEEEecccc----cc
Confidence 9999988653332 1 1233568999998 5653 222111 0124568999999988 89
Q ss_pred CHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEcc
Q 001292 429 DYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGS 508 (1106)
Q Consensus 429 g~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS 508 (1106)
|++.+++|+..+.++. |+++ |+|+|.|++. +.++++++++++.+ +|.|+|.. ++.++|+.||++|+||
T Consensus 333 g~~~li~A~~~l~~~~-------p~~~-l~i~G~G~~~--~~l~~~i~~~~l~~-~V~f~G~~-~~~~~~~~adv~v~pS 400 (500)
T TIGR02918 333 HIDWLVKAVVKAKKSV-------PELT-FDIYGEGGEK--QKLQKIINENQAQD-YIHLKGHR-NLSEVYKDYELYLSAS 400 (500)
T ss_pred CHHHHHHHHHHHHhhC-------CCeE-EEEEECchhH--HHHHHHHHHcCCCC-eEEEcCCC-CHHHHHHhCCEEEEcC
Confidence 9999999998886433 8888 6889999976 89999999999987 99999975 8999999999999999
Q ss_pred CCCCCCCcHHHHHHHHhCCCEEecCCC-CchhhhccCCeEEEEcCC----C----HHHHHHHHHHHHhCcccHHHHHHHH
Q 001292 509 SQVEQGFPSLIVRAMTFGIPVITPDFP-IIKEYVAEGAQVIFFQKD----N----PEGLSRAFSLFISNGKLSKFARTVA 579 (1106)
Q Consensus 509 ~~EeEGFGlvLLEAMA~G~PVIASD~g-GI~EiV~Dg~nG~LV~~~----D----~eeLAeAI~~LLsDpelRk~r~~mG 579 (1106)
..| |||++++||||||+|||++|++ |.+|+|.++.+|++++++ | +++||++|..+++ ++. +.+|+
T Consensus 401 ~~E--gfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-~~~---~~~~~ 474 (500)
T TIGR02918 401 TSE--GFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN-SND---IDAFH 474 (500)
T ss_pred ccc--cccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC-hHH---HHHHH
Confidence 986 9999999999999999999986 899999999999999843 3 8899999999995 443 58899
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHH
Q 001292 580 SAGRLHAKNMLALDCVTRYARILENV 605 (1106)
Q Consensus 580 e~Are~ake~fsee~v~~Y~eLyesl 605 (1106)
++|++.++++.++.++++|.++++++
T Consensus 475 ~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 475 EYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 99999998888888888999998763
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-24 Score=249.50 Aligned_cols=224 Identities=16% Similarity=0.212 Sum_probs=168.5
Q ss_pred HHhccccEEEecCCChhhhhc---CCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCcccc
Q 001292 349 SVFSRVNVIVFPDYTLPMLYS---VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNE 425 (1106)
Q Consensus 349 ~~l~~AD~VIa~S~~~~~~~~---gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~k 425 (1106)
..++.+|.+++.|........ .....++.+||| |+|. +.|.+.... ...+.++.++|+++|++..
T Consensus 168 ~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipn-gvd~---~~f~~~~~~-----~~~~~~~~~~ilf~G~l~~--- 235 (397)
T TIGR03087 168 AIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPN-GVDA---DFFSPDRDY-----PNPYPPGKRVLVFTGAMDY--- 235 (397)
T ss_pred HHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeec-ccch---hhcCCCccc-----cCCCCCCCcEEEEEEecCC---
Confidence 467899999999977665522 334568999998 8998 556543211 0122345679999999887
Q ss_pred ccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEE
Q 001292 426 LSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVL 505 (1106)
Q Consensus 426 g~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV 505 (1106)
.||.+.++.++..+.... ....|+++ |+|+|.++. ..+++ ++..+ +|+|+|+.+++..+|+.||++|
T Consensus 236 -~k~~~~l~~~~~~~~~~l---~~~~p~~~-l~ivG~g~~---~~~~~----l~~~~-~V~~~G~v~~~~~~~~~adv~v 302 (397)
T TIGR03087 236 -WPNIDAVVWFAERVFPAV---RARRPAAE-FYIVGAKPS---PAVRA----LAALP-GVTVTGSVADVRPYLAHAAVAV 302 (397)
T ss_pred -ccCHHHHHHHHHHHHHHH---HHHCCCcE-EEEECCCCh---HHHHH----hccCC-CeEEeeecCCHHHHHHhCCEEE
Confidence 889998886554443322 12237888 688999885 33433 34445 7999999999999999999999
Q ss_pred EccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH
Q 001292 506 YGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLH 585 (1106)
Q Consensus 506 ~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ 585 (1106)
+||... ||+|++++||||||+|||+++.++ ..+...+.+|++++ +|+++++++|.++++|+++ +++|+++|++.
T Consensus 303 ~Ps~~~-eG~~~~~lEAma~G~PVV~t~~~~-~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~~~---~~~~~~~ar~~ 376 (397)
T TIGR03087 303 APLRIA-RGIQNKVLEAMAMAKPVVASPEAA-EGIDALPGAELLVA-ADPADFAAAILALLANPAE---REELGQAARRR 376 (397)
T ss_pred eccccc-CCcccHHHHHHHcCCCEEecCccc-ccccccCCcceEeC-CCHHHHHHHHHHHHcCHHH---HHHHHHHHHHH
Confidence 999753 599999999999999999999753 22333345788887 8999999999999999987 68899999999
Q ss_pred HHHhc-HHHHHHHHHHHHH
Q 001292 586 AKNML-ALDCVTRYARILE 603 (1106)
Q Consensus 586 ake~f-see~v~~Y~eLye 603 (1106)
+.++| |+..++++.++|+
T Consensus 377 v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 377 VLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHhCCHHHHHHHHHHHhc
Confidence 87655 5666668888875
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-23 Score=242.56 Aligned_cols=243 Identities=17% Similarity=0.108 Sum_probs=187.5
Q ss_pred cEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhh---hcCCCCCCEEEeCCCCCCcccccccCc
Q 001292 318 PLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSK 394 (1106)
Q Consensus 318 PVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~p 394 (1106)
++|.+.|+..+...... ..........++.+|.+++.|...... ..+...+++.++++ |++. ..+.+
T Consensus 154 ~~i~~~Hg~d~~~~~~~------~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~-gv~~---~~~~~ 223 (407)
T cd04946 154 RVISRAHGYDLYEDRYP------SGYIPLRRYLLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYL-GVSD---PGIIS 223 (407)
T ss_pred eEEEEeccchhhhhhcc------ccchHHHHHHHhcCCEEEECCHHHHHHHHHHCCCccccEEEEEC-Cccc---ccccC
Confidence 59999999654321111 011111223478999999999776554 22445678889987 7876 33322
Q ss_pred chhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHH
Q 001292 395 SHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEV 474 (1106)
Q Consensus 395 s~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeL 474 (1106)
. ...++.+.|+++|++.+ .||++.+++|+..+.+.. ...+++ ++++|.|++. +.++++
T Consensus 224 ~----------~~~~~~~~il~~Grl~~----~Kg~~~li~a~~~l~~~~-----p~~~l~-~~iiG~g~~~--~~l~~~ 281 (407)
T cd04946 224 K----------PSKDDTLRIVSCSYLVP----VKRVDLIIKALAALAKAR-----PSIKIK-WTHIGGGPLE--DTLKEL 281 (407)
T ss_pred C----------CCCCCCEEEEEeecccc----ccCHHHHHHHHHHHHHhC-----CCceEE-EEEEeCchHH--HHHHHH
Confidence 1 12346789999999988 899999999998886432 012455 5778998875 889999
Q ss_pred HHHcCCCCCcEEEcCCh--hhHHHHHHH--cCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEE
Q 001292 475 ASRLGLLEHSVRHYGFN--GDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFF 550 (1106)
Q Consensus 475 aeklGL~d~rV~flG~~--eDL~~Lyaa--ADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV 550 (1106)
+++++..+ +|.|+|+. +++..+|+. +|++++||..| |+|++++||||+|+|||++++||++|++.++.+|+++
T Consensus 282 ~~~~~~~~-~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~E--g~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~ 358 (407)
T cd04946 282 AESKPENI-SVNFTGELSNSEVYKLYKENPVDVFVNLSESE--GLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLL 358 (407)
T ss_pred HHhcCCCc-eEEEecCCChHHHHHHHhhcCCCEEEeCCccc--cccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEe
Confidence 98888876 89999965 578899976 78999999987 9999999999999999999999999999999999999
Q ss_pred cC-CCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHH-HH
Q 001292 551 QK-DNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVT-RY 598 (1106)
Q Consensus 551 ~~-~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~-~Y 598 (1106)
++ +|+++++++|.++++|+++ +.+|+++|++.++++|+.+... +|
T Consensus 359 ~~~~~~~~la~~I~~ll~~~~~---~~~m~~~ar~~~~~~f~~~~~~~~~ 405 (407)
T cd04946 359 SKDPTPNELVSSLSKFIDNEEE---YQTMREKAREKWEENFNASKNYREF 405 (407)
T ss_pred CCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHHcCHHHhHHHh
Confidence 76 4899999999999999987 6899999999999888765543 44
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.6e-23 Score=233.09 Aligned_cols=295 Identities=16% Similarity=0.151 Sum_probs=198.6
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEcCCCCchHHHHHHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCC
Q 001292 238 SLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSI 317 (1106)
Q Consensus 238 sl~vv~LakaLqe~GyeVtV~t~~dg~~~~i~r~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gI 317 (1106)
..+..-+.+.|+..|.+|+++....-. ...+.. .+..+- +.+.+.....-+.. +..++
T Consensus 13 ~~~~~~~~~~l~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~---~~~~~~~~~~~~~~-------~~~~~ 70 (331)
T PHA01630 13 VRQKKLLEEHLKMLGHKVTVFEKPTLT-----------KYQLPP-GYPIYI---YYTIFNSMLFWKGI-------PHVGK 70 (331)
T ss_pred HHHHHHHHHHHHHhCCeeEEEeccchh-----------hhhcCC-CCceee---ehhhhhHHHHHhhc-------cccCC
Confidence 344455678899999999998654311 112222 222111 22222222222211 13678
Q ss_pred cEEEEEcCCcccccchhhhhhhHHhHHHHHHHH-hccccEEEecCCChhhh--hcCCC-CCCEEEeCCCCCCcccccccC
Q 001292 318 PLVWIIQEDSLANRLPVYVERGFQNLLSYWKSV-FSRVNVIVFPDYTLPML--YSVLD-AGNFFVIPGSPADVWAVEAYS 393 (1106)
Q Consensus 318 PVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~-l~~AD~VIa~S~~~~~~--~~gi~-~~KI~VIpN~GVDl~~~e~F~ 393 (1106)
|+++++|... ++.. .+. ... .+.+|.++++|...... ..+++ ++++.+||| |+|. +.|.
T Consensus 71 ~~v~e~~~~~---~l~~--------~~~--~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpN-GVd~---~~f~ 133 (331)
T PHA01630 71 NIVFEVADTD---AISH--------TAL--YFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPH-NLNP---RMFE 133 (331)
T ss_pred ceEEEEEeec---hhhH--------HHH--HHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECC-CCCH---HHcC
Confidence 9999999831 1111 111 122 46899999999776654 33444 468999998 8997 5564
Q ss_pred cchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHH
Q 001292 394 KSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQE 473 (1106)
Q Consensus 394 ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLke 473 (1106)
+.... ..+.++++++|++.+ .||++.+++|++.+.++ +++++ ++++|.++.. ..+
T Consensus 134 ~~~~~---------~~~~~vl~~~g~~~~----~Kg~d~Li~A~~~l~~~-------~~~~~-llivG~~~~~--~~l-- 188 (331)
T PHA01630 134 YKPKE---------KPHPCVLAILPHSWD----RKGGDIVVKIFHELQNE-------GYDFY-FLIKSSNMLD--PRL-- 188 (331)
T ss_pred CCccc---------cCCCEEEEEeccccc----cCCHHHHHHHHHHHHhh-------CCCEE-EEEEeCcccc--hhh--
Confidence 43110 124567777777666 89999999999887642 36887 5778866543 211
Q ss_pred HHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcC-
Q 001292 474 VASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQK- 552 (1106)
Q Consensus 474 LaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~- 552 (1106)
.++. .+....+.+++..+|+.||++++||..| +||++++||||||+|||+++.||++|++.++.+|++++.
T Consensus 189 ----~~~~--~~~~~v~~~~l~~~y~~aDv~v~pS~~E--~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~ 260 (331)
T PHA01630 189 ----FGLN--GVKTPLPDDDIYSLFAGCDILFYPVRGG--AFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSG 260 (331)
T ss_pred ----cccc--ceeccCCHHHHHHHHHhCCEEEECCccc--cCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeec
Confidence 1333 2222235589999999999999999986 999999999999999999999999999999989888753
Q ss_pred ------------------CCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHH
Q 001292 553 ------------------DNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILEN 604 (1106)
Q Consensus 553 ------------------~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyes 604 (1106)
.|.+++++++.+++.|++..+.++.++.+++...+++.|+..+++|.++|++
T Consensus 261 ~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 261 RKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred ccccccccCCcccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3778899999999988521112455666677777777778888899999975
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=237.32 Aligned_cols=272 Identities=14% Similarity=0.147 Sum_probs=199.7
Q ss_pred ccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEec
Q 001292 281 QEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFP 360 (1106)
Q Consensus 281 ~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~ 360 (1106)
...+|+++++.........+.. ....++|.++|+.......... ...+..+.......+..+|.+++.
T Consensus 97 ~~~~diii~~~~~~~~~~~~~~-----------~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~ii~~ 164 (372)
T cd04949 97 DTKPDVFILDRPTLDGQALLNM-----------KKAAKVVVVLHSNHVSDNNDPV-HSLINNFYEYVFENLDKVDGVIVA 164 (372)
T ss_pred CCCCCEEEECCccccchhHHhc-----------cCCceEEEEEChHHhCCccccc-ccccchhhHHHHhChhhCCEEEEc
Confidence 3678888886655433311111 1345678888873222111000 000011111222346789999998
Q ss_pred CCChhhh-hcCCC-CCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHH
Q 001292 361 DYTLPML-YSVLD-AGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVG 438 (1106)
Q Consensus 361 S~~~~~~-~~gi~-~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k 438 (1106)
+...... ...++ ..++.+||+ |++. ..+.+.. ....+...++++||+.+ .|+.+.+++|+.
T Consensus 165 s~~~~~~l~~~~~~~~~v~~ip~-g~~~---~~~~~~~---------~~~~~~~~i~~vgrl~~----~K~~~~li~a~~ 227 (372)
T cd04949 165 TEQQKQDLQKQFGNYNPIYTIPV-GSID---PLKLPAQ---------FKQRKPHKIITVARLAP----EKQLDQLIKAFA 227 (372)
T ss_pred cHHHHHHHHHHhCCCCceEEEcc-cccC---hhhcccc---------hhhcCCCeEEEEEccCc----ccCHHHHHHHHH
Confidence 8655443 22222 234889997 6776 3332211 01235568999999887 899999999998
Q ss_pred HhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHH
Q 001292 439 PLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSL 518 (1106)
Q Consensus 439 ~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlv 518 (1106)
.+.++ .|+++ |+|+|.++.. ..++++++++++.+ +|.+.|+.+++..+|+.||++|+||..| |||++
T Consensus 228 ~l~~~-------~~~~~-l~i~G~g~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~~S~~E--g~~~~ 294 (372)
T cd04949 228 KVVKQ-------VPDAT-LDIYGYGDEE--EKLKELIEELGLED-YVFLKGYTRDLDEVYQKAQLSLLTSQSE--GFGLS 294 (372)
T ss_pred HHHHh-------CCCcE-EEEEEeCchH--HHHHHHHHHcCCcc-eEEEcCCCCCHHHHHhhhhEEEeccccc--ccChH
Confidence 87643 37888 6889999875 78888889999987 9999999899999999999999999976 99999
Q ss_pred HHHHHHhCCCEEecCCC-CchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHH
Q 001292 519 IVRAMTFGIPVITPDFP-IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTR 597 (1106)
Q Consensus 519 LLEAMA~G~PVIASD~g-GI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~ 597 (1106)
++||||+|+|||+++.+ |..+++.++.+|++++++|+++|+++|..+++|++. ..+|++++++.++++.++..+++
T Consensus 295 ~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~~~---~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 295 LMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDPKL---LQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred HHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHHHhhHHHHHhc
Confidence 99999999999999987 899999999999999999999999999999999987 68899999999777666666554
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-23 Score=233.37 Aligned_cols=305 Identities=15% Similarity=0.145 Sum_probs=203.3
Q ss_pred EEEEEeCCCC-CChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchH----------HH-------H-------HHhHHHHH
Q 001292 224 RIGLILGNMA-KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS----------LW-------E-------QIAGQISI 278 (1106)
Q Consensus 224 RIalVlg~L~-~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~----------i~-------r-------~lg~lvki 278 (1106)
|||++...+. .||.+..+..+++.|.+.+..+. ....+.... .+ + ........
T Consensus 1 ~i~~~~~~~~~~GG~E~~~~~l~~~l~~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (351)
T cd03804 1 KVAIVHDWLVNIGGGEKVVEALARLFPDADIFTL--VDDPDKLPRLLRLKKIRTSFIQKLPFARRRYRKYLPLMPLAIEQ 78 (351)
T ss_pred CEEEEEeccccCCCHHHHHHHHHHhCCCCCEEEE--eecCCccchhhcCCceeechhhhchhhHhhHhhhCchhhHHHHh
Confidence 6888888887 59999999999998875332222 111111000 00 0 01112334
Q ss_pred hhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCc-----ccc----cchhhhh---hhHHhHHHH
Q 001292 279 LGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDS-----LAN----RLPVYVE---RGFQNLLSY 346 (1106)
Q Consensus 279 Ir~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~-----Ls~----r~~~Y~~---~gleklis~ 346 (1106)
+...++|+|+.+....... +.. ..++|.++.+|... +.. ....... ....+....
T Consensus 79 ~~~~~~D~v~~~~~~~~~~--~~~-----------~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (351)
T cd03804 79 FDLSGYDLVISSSHAVAKG--VIT-----------RPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRI 145 (351)
T ss_pred ccccCCCEEEEcCcHHhcc--ccC-----------CCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHH
Confidence 4456788887654321111 110 25688888888721 100 0000000 001111221
Q ss_pred H-HHHhccccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCcccc
Q 001292 347 W-KSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNE 425 (1106)
Q Consensus 347 ~-~~~l~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~k 425 (1106)
+ ...++.+|.+++.|.............+..+|+| |+|. +.|.+.. .....++++|++..
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~vi~~-~~d~---~~~~~~~------------~~~~~il~~G~~~~--- 206 (351)
T cd03804 146 WDRRSAARVDYFIANSRFVARRIKKYYGRDATVIYP-PVDT---DRFTPAE------------EKEDYYLSVGRLVP--- 206 (351)
T ss_pred HHHHHhcCCCEEEECCHHHHHHHHHHhCCCcEEECC-CCCH---hhcCcCC------------CCCCEEEEEEcCcc---
Confidence 2 3457899999999977665532222335678887 7887 4443321 23447899999888
Q ss_pred ccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCe
Q 001292 426 LSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADI 503 (1106)
Q Consensus 426 g~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADV 503 (1106)
.||++.+++|++.+ + ++ |+|+|+|++. +.+++ +..+ +|.|+|+. +++..+|+.||+
T Consensus 207 -~K~~~~li~a~~~~-----------~-~~-l~ivG~g~~~--~~l~~-----~~~~-~V~~~g~~~~~~~~~~~~~ad~ 264 (351)
T cd03804 207 -YKRIDLAIEAFNKL-----------G-KR-LVVIGDGPEL--DRLRA-----KAGP-NVTFLGRVSDEELRDLYARARA 264 (351)
T ss_pred -ccChHHHHHHHHHC-----------C-Cc-EEEEECChhH--HHHHh-----hcCC-CEEEecCCCHHHHHHHHHhCCE
Confidence 89999999999654 2 45 6889999864 55554 4455 89999965 559999999999
Q ss_pred EEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCc-ccHHHHHHHHHHH
Q 001292 504 VLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG-KLSKFARTVASAG 582 (1106)
Q Consensus 504 fV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDp-elRk~r~~mGe~A 582 (1106)
+++||. | +||++++||||||+|||+++.++..|++.++.+|++++++|+++++++|..+++|+ .. .+.+++++
T Consensus 265 ~v~ps~-e--~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~~~---~~~~~~~~ 338 (351)
T cd03804 265 FLFPAE-E--DFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNEDFD---PQAIRAHA 338 (351)
T ss_pred EEECCc-C--CCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcccC---HHHHHHHH
Confidence 999998 7 99999999999999999999999999999999999999999999999999999998 43 45566665
Q ss_pred HHHHHHhc
Q 001292 583 RLHAKNML 590 (1106)
Q Consensus 583 re~ake~f 590 (1106)
+++..+.|
T Consensus 339 ~~~~~~~~ 346 (351)
T cd03804 339 ERFSESRF 346 (351)
T ss_pred HhcCHHHH
Confidence 55444444
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.8e-23 Score=243.81 Aligned_cols=330 Identities=12% Similarity=0.088 Sum_probs=221.2
Q ss_pred CCEEEEEeCCCCCChhHH-------------HHHHHHHHHHHC-CCEEEE-EEcCCCCc----hHHHHHHhHHHHHhhcc
Q 001292 222 PPRIGLILGNMAKDSRSL-------------LLITVVKNLQKL-GYVFKI-YAVRSGNS----HSLWEQIAGQISILGQE 282 (1106)
Q Consensus 222 ~~RIalVlg~L~~gGesl-------------~vv~LakaLqe~-GyeVtV-~t~~dg~~----~~i~r~lg~lvkiIr~~ 282 (1106)
..+|.+|++.|....+.+ +-.-+-+.|+++ |.+..+ +.+.++.+ ..+. -.|.+...+..+
T Consensus 355 ~~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~wl~~r~g~~~~~~i~fYpg~~~~~~~SI~-p~gdI~~~L~~f 433 (794)
T PLN02501 355 KQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEERIGFKADFKISFYPGKFSKERRSII-PAGDTSQFIPSK 433 (794)
T ss_pred CceEEEEEecCCccccccccCCCcccCCHHHHHHHHHHHHHHhcCCCCCceEEeecchhccCCcccc-chHHHHHHhhcc
Confidence 578889988887632221 222344555343 554322 12233332 2222 345578888899
Q ss_pred CccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHh----HHHHHHHHhccccEEE
Q 001292 283 QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQN----LLSYWKSVFSRVNVIV 358 (1106)
Q Consensus 283 ~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~glek----lis~~~~~l~~AD~VI 358 (1106)
.+|++|+..+...-+..-..+... +.+ |+|.++|..-. ..+.+|....+.. ++..|...+ +||.|+
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~Ar-------Kl~-PVVasyHTny~-eYl~~y~~g~L~~~llk~l~~~v~r~-hcD~VI 503 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTD-------KFN-HVVGVVHTNYL-EYIKREKNGALQAFFVKHINNWVTRA-YCHKVL 503 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHH-------HcC-CeEEEEeCCcH-HHHhHhcchhHHHHHHHHHHHHHHHh-hCCEEE
Confidence 999999977665443310111111 134 89999999532 1222232222233 222332222 289999
Q ss_pred ecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHH
Q 001292 359 FPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVG 438 (1106)
Q Consensus 359 a~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k 438 (1106)
++|..... ++...+..+ + |||. +.|.+..... .+.++++......++++||+.. .||++.+|+|++
T Consensus 504 aPS~atq~----L~~~vI~nV-n-GVDt---e~F~P~~r~~-~~r~lgi~~~~kgiLfVGRLa~----EKGld~LLeAla 569 (794)
T PLN02501 504 RLSAATQD----LPKSVICNV-H-GVNP---KFLKIGEKVA-EERELGQQAFSKGAYFLGKMVW----AKGYRELIDLLA 569 (794)
T ss_pred cCCHHHHH----hcccceeec-c-cccc---cccCCcchhH-HHHhcCCccccCceEEEEcccc----cCCHHHHHHHHH
Confidence 99954432 223222222 3 8998 7777754322 2356777655556899999998 999999999998
Q ss_pred HhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHH
Q 001292 439 PLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSL 518 (1106)
Q Consensus 439 ~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlv 518 (1106)
.+..+ .|+++ |+|+|+||.+ +.+++++.++++ +|.|+|..+++..+|+.+||||+||..| +||++
T Consensus 570 ~L~~~-------~pnvr-LvIVGDGP~r--eeLe~la~eLgL---~V~FLG~~dd~~~lyasaDVFVlPS~sE--gFGlV 634 (794)
T PLN02501 570 KHKNE-------LDGFN-LDVFGNGEDA--HEVQRAAKRLDL---NLNFLKGRDHADDSLHGYKVFINPSISD--VLCTA 634 (794)
T ss_pred HHHhh-------CCCeE-EEEEcCCccH--HHHHHHHHHcCC---EEEecCCCCCHHHHHHhCCEEEECCCcc--cchHH
Confidence 77532 26787 7899999986 899999998876 4899999988999999999999999987 99999
Q ss_pred HHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHH
Q 001292 519 IVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRY 598 (1106)
Q Consensus 519 LLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y 598 (1106)
++||||||+|||+++.++. +++.++.+|+++ +|+++++++|.++++++..+ ..++. ...+.|+..++++
T Consensus 635 lLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI~~LLsd~~~r---l~~~a-----~~~~SWeAaadrL 703 (794)
T PLN02501 635 TAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKVKEALANEPQP---LTPEQ-----RYNLSWEAATQRF 703 (794)
T ss_pred HHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHHHHHHhCchhh---hHHHH-----HhhCCHHHHHHHH
Confidence 9999999999999999985 447677788765 79999999999999988752 22221 3366777777776
Q ss_pred HHHH
Q 001292 599 ARIL 602 (1106)
Q Consensus 599 ~eLy 602 (1106)
.+.-
T Consensus 704 le~~ 707 (794)
T PLN02501 704 MEYS 707 (794)
T ss_pred HHhh
Confidence 6643
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-22 Score=227.21 Aligned_cols=254 Identities=14% Similarity=0.088 Sum_probs=176.4
Q ss_pred hhccCccEEEEccccH---HHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccc-cchhhhhhhHHhHHHHH-HHHhcc
Q 001292 279 LGQEQYSLIDWSIFDG---IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLAN-RLPVYVERGFQNLLSYW-KSVFSR 353 (1106)
Q Consensus 279 Ir~~~pDiIh~~~~~~---i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~-r~~~Y~~~gleklis~~-~~~l~~ 353 (1106)
++..+||+||.+.... .+...+..+. .++|+|+++|+..... ...........++...+ +..++.
T Consensus 96 ~~~~~~DvV~~~~~~~~~~~~~~~~~~~~----------~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 165 (371)
T PLN02275 96 VKIPRPDVFLVQNPPSVPTLAVVKLACWL----------RRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKM 165 (371)
T ss_pred hhCCCCCEEEEeCCCCcHHHHHHHHHHHH----------hCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhh
Confidence 3457999999976443 2333344432 5689999999852100 00000000011122222 235678
Q ss_pred ccEEEecCCChhhhh---cCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCH
Q 001292 354 VNVIVFPDYTLPMLY---SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDY 430 (1106)
Q Consensus 354 AD~VIa~S~~~~~~~---~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~ 430 (1106)
+|.++++|....+.. .+.+ +.+|+| ++ . +.|.+..... .+. .++..+++++||+.+ .|++
T Consensus 166 ad~ii~~S~~~~~~l~~~~g~~---i~vi~n-~~-~---~~f~~~~~~~----~~~-~~~~~~i~~~grl~~----~k~~ 228 (371)
T PLN02275 166 ADGHLCVTKAMQHELDQNWGIR---ATVLYD-QP-P---EFFRPASLEI----RLR-PNRPALVVSSTSWTP----DEDF 228 (371)
T ss_pred CCEEEECCHHHHHHHHHhcCCC---eEEECC-CC-H---HHcCcCCchh----ccc-CCCcEEEEEeCceec----cCCH
Confidence 999999997766542 2332 789998 43 3 4565432211 111 224457888999887 8999
Q ss_pred HHHHHHHHHhHHHHHhhc----------cCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcC-C--hhhHHHH
Q 001292 431 AVAMHDVGPLLIKYARRN----------SVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG-F--NGDVNGV 497 (1106)
Q Consensus 431 dlLLeA~k~Ll~k~aklk----------~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG-~--~eDL~~L 497 (1106)
+.+++|+..+...+...+ ...|+++ ++|+|+|+++ ++++++++++|+++ |+|.+ + .+++..+
T Consensus 229 ~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~-l~ivG~G~~~--~~l~~~~~~~~l~~--v~~~~~~~~~~~~~~~ 303 (371)
T PLN02275 229 GILLEAAVMYDRRVAARLNESDSASGKQSLYPRLL-FIITGKGPQK--AMYEEKISRLNLRH--VAFRTMWLEAEDYPLL 303 (371)
T ss_pred HHHHHHHHHHHhhhhhccccccccccccccCCCeE-EEEEeCCCCH--HHHHHHHHHcCCCc--eEEEcCCCCHHHHHHH
Confidence 999999987754332221 2347898 6899999986 99999999999984 66654 3 5899999
Q ss_pred HHHcCeEEEccC-CCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHH
Q 001292 498 LLMADIVLYGSS-QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI 566 (1106)
Q Consensus 498 yaaADVfV~PS~-~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LL 566 (1106)
|+.||++|+|+. ..+|++|++++||||||+|||+++.++++|+|.++.+|++++ |+++|+++|.+++
T Consensus 304 l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 304 LGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred HHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 999999998642 223589999999999999999999999999999999999997 7999999998874
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.5e-23 Score=225.64 Aligned_cols=334 Identities=17% Similarity=0.172 Sum_probs=239.4
Q ss_pred EEEEEeCCCCC--ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchH--------------------------HHHHHhHH
Q 001292 224 RIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS--------------------------LWEQIAGQ 275 (1106)
Q Consensus 224 RIalVlg~L~~--gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~--------------------------i~r~lg~l 275 (1106)
+||+|++-+-+ ||.+..+..|.+.|-+.|+.|.+++...|.... ++..+..+
T Consensus 2 ~i~mVsdff~P~~ggveshiy~lSq~li~lghkVvvithayg~r~girylt~glkVyylp~~v~~n~tT~ptv~~~~Pll 81 (426)
T KOG1111|consen 2 RILMVSDFFYPSTGGVESHIYALSQCLIRLGHKVVVITHAYGNRVGIRYLTNGLKVYYLPAVVGYNQTTFPTVFSDFPLL 81 (426)
T ss_pred cceeeCcccccCCCChhhhHHHhhcchhhcCCeEEEEeccccCccceeeecCCceEEEEeeeeeecccchhhhhccCccc
Confidence 57888777655 899999999999999999999999876543211 11111224
Q ss_pred HHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCC-cccccchhhhhhhHHhHHHHHHHHhccc
Q 001292 276 ISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQED-SLANRLPVYVERGFQNLLSYWKSVFSRV 354 (1106)
Q Consensus 276 vkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna-~Ls~r~~~Y~~~gleklis~~~~~l~~A 354 (1106)
..++..++..++|-|...+.+..-...... ..|.++++|-|.. .+.. ..- .. ..+ .....+...
T Consensus 82 r~i~lrE~I~ivhghs~fS~lahe~l~har--------tMGlktVfTdHSlfGfad-~~s-i~--~n~---ll~~sL~~i 146 (426)
T KOG1111|consen 82 RPILLRERIEIVHGHSPFSYLAHEALMHAR--------TMGLKTVFTDHSLFGFAD-IGS-IL--TNK---LLPLSLANI 146 (426)
T ss_pred chhhhhhceEEEecCChHHHHHHHHHHHHH--------hcCceEEEeccccccccc-hhh-hh--hcc---eeeeeecCC
Confidence 455556678888888877666432211111 2578999998882 1100 000 00 011 111235677
Q ss_pred cEEEecCCChhhh---hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHH
Q 001292 355 NVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA 431 (1106)
Q Consensus 355 D~VIa~S~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~d 431 (1106)
|.+|+.++...+- ...++++++.+|||. ++. +.|.|.... ..+.+...|+.+||+.. +||.|
T Consensus 147 d~~IcVshtskentvlr~~L~p~kvsvIPnA-v~~---~~f~P~~~~-------~~S~~i~~ivv~sRLvy----rKGiD 211 (426)
T KOG1111|consen 147 DRIICVSHTSKENTVLRGALAPAKVSVIPNA-VVT---HTFTPDAAD-------KPSADIITIVVASRLVY----RKGID 211 (426)
T ss_pred CcEEEEeecCCCceEEEeccCHhHeeeccce-eec---cccccCccc-------cCCCCeeEEEEEeeeee----ccchH
Confidence 8888887554433 667888999999995 776 788875322 11234478999999987 88999
Q ss_pred HHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcC--ChhhHHHHHHHcCeEEEccC
Q 001292 432 VAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSS 509 (1106)
Q Consensus 432 lLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG--~~eDL~~LyaaADVfV~PS~ 509 (1106)
++++++.++.+ ..|+++ ++|+|+||.+ ..+++..+++.+.+ +|.++| +.+++.+.|..-|||++||.
T Consensus 212 ll~~iIp~vc~-------~~p~vr-fii~GDGPk~--i~lee~lEk~~l~~-rV~~lG~v~h~~Vr~vl~~G~IFlntSl 280 (426)
T KOG1111|consen 212 LLLEIIPSVCD-------KHPEVR-FIIIGDGPKR--IDLEEMLEKLFLQD-RVVMLGTVPHDRVRDVLVRGDIFLNTSL 280 (426)
T ss_pred HHHHHHHHHHh-------cCCCee-EEEecCCccc--chHHHHHHHhhccC-ceEEecccchHHHHHHHhcCcEEeccHH
Confidence 99999977764 349999 5899999987 99999999999998 999999 45889999999999999999
Q ss_pred CCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHh
Q 001292 510 QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNM 589 (1106)
Q Consensus 510 ~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~ 589 (1106)
.| .||++++|||+||+|||++++||++|++.++ . ......+++++++++.+.++.-.. .-+...+.+++.
T Consensus 281 TE--afc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~-i~~~~~~~~dl~~~v~~ai~~~~~------~p~~~h~~v~~~ 350 (426)
T KOG1111|consen 281 TE--AFCMVIVEAASCGLPVVSTRVGGIPEVLPED-M-ITLGEPGPDDLVGAVEKAITKLRT------LPLEFHDRVKKM 350 (426)
T ss_pred HH--HHHHHHHHHHhCCCEEEEeecCCccccCCcc-c-eeccCCChHHHHHHHHHHHHHhcc------CchhHHHHHHHh
Confidence 87 9999999999999999999999999999664 2 223345688888888877763321 112333444444
Q ss_pred -cHHHHHHHHHHHHHHHhcC
Q 001292 590 -LALDCVTRYARILENVLNF 608 (1106)
Q Consensus 590 -fsee~v~~Y~eLyeslLk~ 608 (1106)
.|.+++++-+++|.++.+.
T Consensus 351 y~w~dVa~rTekvy~r~~~t 370 (426)
T KOG1111|consen 351 YSWKDVAERTEKVYDRAATT 370 (426)
T ss_pred ccHHHHHHHHHHHHHHHhhc
Confidence 5677777999999998764
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-21 Score=218.66 Aligned_cols=298 Identities=13% Similarity=0.033 Sum_probs=203.3
Q ss_pred CChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHHHHHHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCC
Q 001292 234 KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEP 313 (1106)
Q Consensus 234 ~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i~r~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~ 313 (1106)
...-....-++++.|++.|--|++++..- .+......++..+.....+-..+.....+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 67 (335)
T PHA01633 10 YSSISNVSEDIAEVLRENGEIVTITKNPF---------------YIPKAEKLIVFIPFHPPSLNPYLYAYYQF------- 67 (335)
T ss_pred hhhhhhHHHHHHHHHHhCCcEEEEecCCc---------------ccCccceEEEEeecCCcccchHHhhhhhh-------
Confidence 34445566778888889888888875431 11111222333333333333344333333
Q ss_pred CCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccc
Q 001292 314 FHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEA 391 (1106)
Q Consensus 314 ~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~ 391 (1106)
..+.|++.+.|+... . ..+...+.+.+.+|+.|...... ..+++.. + +|++ |+|+ +.
T Consensus 68 ~~~~~~~tt~~g~~~--------~-------~~y~~~m~~~~~vIavS~~t~~~L~~~G~~~~-i-~I~~-GVD~---~~ 126 (335)
T PHA01633 68 KGKKYFYTTCDGIPN--------I-------EIVNKYLLQDVKFIPNSKFSAENLQEVGLQVD-L-PVFH-GINF---KI 126 (335)
T ss_pred cCCCceEEeeCCcCc--------h-------HHHHHHHhcCCEEEeCCHHHHHHHHHhCCCCc-e-eeeC-CCCh---hh
Confidence 245788999898621 1 11233344556788888555443 3455543 3 4666 8998 67
Q ss_pred cCcch-hHHHHHHHcCCC-CCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHH
Q 001292 392 YSKSH-EKYQLRKENGFL-KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYND 469 (1106)
Q Consensus 392 F~ps~-s~~~LR~~lGL~-~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~e 469 (1106)
|.+.. ....+|++++.. ++.++++++||+.. +||++.+++|++.|.++.... ..+++ ++++|. .
T Consensus 127 f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~----~KG~~~LI~A~~~L~~~~p~~---~~~i~-l~ivG~------~ 192 (335)
T PHA01633 127 VENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTK----RKNMDLMLQVFNELNTKYPDI---AKKIH-FFVISH------K 192 (335)
T ss_pred cCccchhhHHHHHHhCcCCCCCeEEEEEeCCcc----ccCHHHHHHHHHHHHHhCCCc---cccEE-EEEEcH------H
Confidence 76643 234567777653 57789999999988 999999999998887543110 12456 466663 1
Q ss_pred HHHHHHHHcCCCCCcEEEcC-----ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhcc-
Q 001292 470 ALQEVASRLGLLEHSVRHYG-----FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE- 543 (1106)
Q Consensus 470 eLkeLaeklGL~d~rV~flG-----~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~D- 543 (1106)
..+++++.+ +|.|+| ..+++..+|++||++|+||..| +||++++||||||+|||+++.++++|++.+
T Consensus 193 ----~~~~l~l~~-~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~E--gfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~ 265 (335)
T PHA01633 193 ----QFTQLEVPA-NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTE--GFGMPVLESMAMGTPVIHQLMPPLDEFTSWQ 265 (335)
T ss_pred ----HHHHcCCCC-cEEEEecCCCCCHHHHHHHHHhCCEEEECCccc--cCCHHHHHHHHcCCCEEEccCCCceeecCCc
Confidence 134567877 899985 2478999999999999999986 999999999999999999999999887542
Q ss_pred -----------------CCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHH
Q 001292 544 -----------------GAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYA 599 (1106)
Q Consensus 544 -----------------g~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~ 599 (1106)
...|++++..|+++|+++|..+++..+. ...+.++++.++++.++....+|.
T Consensus 266 ~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~----~~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 266 WNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDR----EERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred cceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccCh----hhhhHHHHHHHHhcCHHHHHHHhh
Confidence 1246788888999999999999666542 333678889999988888877775
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.9e-21 Score=215.31 Aligned_cols=304 Identities=16% Similarity=0.151 Sum_probs=212.0
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch---------------------H-------H---HHHHh
Q 001292 225 IGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH---------------------S-------L---WEQIA 273 (1106)
Q Consensus 225 IalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~---------------------~-------i---~r~lg 273 (1106)
|++..+.. ||....+..++++|.++||+|++++...+... . . ...+.
T Consensus 2 ~~~~~~~~--gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (350)
T cd03785 2 ILIAGGGT--GGHIFPALALAEELRERGAEVLFLGTKRGLEARLVPKAGIPLHTIPVGGLRRKGSLKKLKAPFKLLKGVL 79 (350)
T ss_pred EEEEecCc--hhhhhHHHHHHHHHHhCCCEEEEEECCCcchhhcccccCCceEEEEecCcCCCChHHHHHHHHHHHHHHH
Confidence 44444443 68888999999999999999999976432100 0 0 11112
Q ss_pred HHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhcc
Q 001292 274 GQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSR 353 (1106)
Q Consensus 274 ~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~ 353 (1106)
.+.++++..+||+||.+.....+...+..+. .++|+|++.|+.. + ....+ ..+..
T Consensus 80 ~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~----------~~~p~v~~~~~~~--------~-----~~~~~--~~~~~ 134 (350)
T cd03785 80 QARKILKKFKPDVVVGFGGYVSGPVGLAAKL----------LGIPLVIHEQNAV--------P-----GLANR--LLARF 134 (350)
T ss_pred HHHHHHHhcCCCEEEECCCCcchHHHHHHHH----------hCCCEEEEcCCCC--------c-----cHHHH--HHHHh
Confidence 2456778889999998765444444444432 5789887655431 0 01111 22346
Q ss_pred ccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHH-H
Q 001292 354 VNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA-V 432 (1106)
Q Consensus 354 AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~d-l 432 (1106)
+|.|++++...... ++..++.+|+| |+|. +.+.+.. . +++++++++.++++++|+... .|+.. .
T Consensus 135 ~~~vi~~s~~~~~~---~~~~~~~~i~n-~v~~---~~~~~~~---~-~~~~~~~~~~~~i~~~~g~~~----~~~~~~~ 199 (350)
T cd03785 135 ADRVALSFPETAKY---FPKDKAVVTGN-PVRE---EILALDR---E-RARLGLRPGKPTLLVFGGSQG----ARAINEA 199 (350)
T ss_pred hCEEEEcchhhhhc---CCCCcEEEECC-CCch---HHhhhhh---h-HHhcCCCCCCeEEEEECCcHh----HHHHHHH
Confidence 88999888665443 56678999998 7886 4443321 1 777888888888888876544 44543 4
Q ss_pred HHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCC
Q 001292 433 AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVE 512 (1106)
Q Consensus 433 LLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~Ee 512 (1106)
++++++.+.. +++++++++|.+ + .+.+++.++++ .+ +|++.|+.+++..+|+.||++|.+|
T Consensus 200 l~~a~~~l~~---------~~~~~~~i~G~g-~--~~~l~~~~~~~--~~-~v~~~g~~~~~~~~l~~ad~~v~~s---- 260 (350)
T cd03785 200 VPEALAELLR---------KRLQVIHQTGKG-D--LEEVKKAYEEL--GV-NYEVFPFIDDMAAAYAAADLVISRA---- 260 (350)
T ss_pred HHHHHHHhhc---------cCeEEEEEcCCc-c--HHHHHHHHhcc--CC-CeEEeehhhhHHHHHHhcCEEEECC----
Confidence 4566654431 345556788888 3 37788888765 34 8999999999999999999999754
Q ss_pred CCCcHHHHHHHHhCCCEEecCCCC--------chhhhccCCeEEEEcCC--CHHHHHHHHHHHHhCcccHHHHHHHHHHH
Q 001292 513 QGFPSLIVRAMTFGIPVITPDFPI--------IKEYVAEGAQVIFFQKD--NPEGLSRAFSLFISNGKLSKFARTVASAG 582 (1106)
Q Consensus 513 EGFGlvLLEAMA~G~PVIASD~gG--------I~EiV~Dg~nG~LV~~~--D~eeLAeAI~~LLsDpelRk~r~~mGe~A 582 (1106)
.+++++|||++|+|||+++.++ ..+.+.+..+|++++++ |+++|+++|..+++|++. +++|+.++
T Consensus 261 --g~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~---~~~~~~~~ 335 (350)
T cd03785 261 --GASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPER---LKAMAEAA 335 (350)
T ss_pred --CHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHH---HHHHHHHH
Confidence 2689999999999999987654 34667777799999887 899999999999998877 68899999
Q ss_pred HHHHHHhcHHHH
Q 001292 583 RLHAKNMLALDC 594 (1106)
Q Consensus 583 re~ake~fsee~ 594 (1106)
++.+..+..+++
T Consensus 336 ~~~~~~~~~~~i 347 (350)
T cd03785 336 RSLARPDAAERI 347 (350)
T ss_pred HhcCCCCHHHHH
Confidence 988765444443
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-20 Score=212.30 Aligned_cols=313 Identities=15% Similarity=0.100 Sum_probs=217.1
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch-------------------------------HHHHH
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-------------------------------SLWEQ 271 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~-------------------------------~i~r~ 271 (1106)
+||+++.+.. +|....++.+++.|++.||+|++++...+... .....
T Consensus 2 ~~i~i~~~g~--gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (357)
T PRK00726 2 KKILLAGGGT--GGHVFPALALAEELKKRGWEVLYLGTARGMEARLVPKAGIEFHFIPSGGLRRKGSLANLKAPFKLLKG 79 (357)
T ss_pred cEEEEEcCcc--hHhhhHHHHHHHHHHhCCCEEEEEECCCchhhhccccCCCcEEEEeccCcCCCChHHHHHHHHHHHHH
Confidence 5777776655 47777889999999999999999987442100 00112
Q ss_pred HhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHh
Q 001292 272 IAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVF 351 (1106)
Q Consensus 272 lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l 351 (1106)
+..+.++++..++|+||.+.....+...+..+. .++|+|++.|... +. ...++ .+
T Consensus 80 ~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~----------~~~p~v~~~~~~~--------~~-~~~r~------~~ 134 (357)
T PRK00726 80 VLQARKILKRFKPDVVVGFGGYVSGPGGLAARL----------LGIPLVIHEQNAV--------PG-LANKL------LA 134 (357)
T ss_pred HHHHHHHHHhcCCCEEEECCCcchhHHHHHHHH----------cCCCEEEEcCCCC--------cc-HHHHH------HH
Confidence 222456677789999999986555554444432 5789998765421 00 01111 23
Q ss_pred ccccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHH
Q 001292 352 SRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA 431 (1106)
Q Consensus 352 ~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~d 431 (1106)
+.+|.+++.+... ... .+..++.+||| |+|. +.+.+. ..+.+++++++.++|+++|+... .++..
T Consensus 135 ~~~d~ii~~~~~~--~~~-~~~~~i~vi~n-~v~~---~~~~~~----~~~~~~~~~~~~~~i~~~gg~~~----~~~~~ 199 (357)
T PRK00726 135 RFAKKVATAFPGA--FPE-FFKPKAVVTGN-PVRE---EILALA----APPARLAGREGKPTLLVVGGSQG----ARVLN 199 (357)
T ss_pred HHhchheECchhh--hhc-cCCCCEEEECC-CCCh---Hhhccc----chhhhccCCCCCeEEEEECCcHh----HHHHH
Confidence 4677777766432 111 56789999998 7886 333321 12345677777888888887554 55544
Q ss_pred -HHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCC
Q 001292 432 -VAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQ 510 (1106)
Q Consensus 432 -lLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~ 510 (1106)
.+++|+.++.. . + . .++++|+++. +.+.+..+ +++ +|.+.|+.+++..+|+.||+++++|
T Consensus 200 ~~l~~a~~~~~~-------~-~-~-~~~~~G~g~~---~~~~~~~~-~~~---~v~~~g~~~~~~~~~~~~d~~i~~~-- 260 (357)
T PRK00726 200 EAVPEALALLPE-------A-L-Q-VIHQTGKGDL---EEVRAAYA-AGI---NAEVVPFIDDMAAAYAAADLVICRA-- 260 (357)
T ss_pred HHHHHHHHHhhh-------C-c-E-EEEEcCCCcH---HHHHHHhh-cCC---cEEEeehHhhHHHHHHhCCEEEECC--
Confidence 34477765531 1 2 2 3678899874 45554445 555 3999999999999999999999764
Q ss_pred CCCCCcHHHHHHHHhCCCEEecCCCC--------chhhhccCCeEEEEcCCC--HHHHHHHHHHHHhCcccHHHHHHHHH
Q 001292 511 VEQGFPSLIVRAMTFGIPVITPDFPI--------IKEYVAEGAQVIFFQKDN--PEGLSRAFSLFISNGKLSKFARTVAS 580 (1106)
Q Consensus 511 EeEGFGlvLLEAMA~G~PVIASD~gG--------I~EiV~Dg~nG~LV~~~D--~eeLAeAI~~LLsDpelRk~r~~mGe 580 (1106)
.+.+++|||++|+|||++..++ ..+.+.+..+|+++++.| +++|+++|.++++|+++ +++|++
T Consensus 261 ----g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~---~~~~~~ 333 (357)
T PRK00726 261 ----GASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPER---LEAMAE 333 (357)
T ss_pred ----CHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHH---HHHHHH
Confidence 3689999999999999987642 246677778999998887 99999999999999987 688999
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHH
Q 001292 581 AGRLHAKNMLALDCVTRYARILE 603 (1106)
Q Consensus 581 ~Are~ake~fsee~v~~Y~eLye 603 (1106)
++++.+++......++.+.+++.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 334 AARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHhcCCcCHHHHHHHHHHHHhh
Confidence 99998876666676667766653
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=211.37 Aligned_cols=304 Identities=17% Similarity=0.149 Sum_probs=206.1
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchH-------------------------------HHHH
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS-------------------------------LWEQ 271 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~-------------------------------i~r~ 271 (1106)
+||.++.|..+ |.......|+++|.++||+|++++...+.... .+..
T Consensus 1 ~~i~~~~g~~~--g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~l~~~~~~~~~ 78 (348)
T TIGR01133 1 KKVVLAAGGTG--GHIFPALAVAEELIKRGVEVLWLGTKRGLEKRLVPKAGIEFYFIPVGGLRRKGSFRLIKTPLKLLKA 78 (348)
T ss_pred CeEEEEeCccH--HHHhHHHHHHHHHHhCCCEEEEEeCCCcchhcccccCCCceEEEeccCcCCCChHHHHHHHHHHHHH
Confidence 37888887764 44446679999999999999999852210000 0111
Q ss_pred HhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHh
Q 001292 272 IAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVF 351 (1106)
Q Consensus 272 lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l 351 (1106)
+..+.++++..+||+||.+.....+...+..+. .++|+|++.++.. . ....+ ...
T Consensus 79 ~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~----------~~~p~v~~~~~~~-------~------~~~~~--~~~ 133 (348)
T TIGR01133 79 VFQARRILKKFKPDAVIGFGGYVSGPAGLAAKL----------LGIPLFHHEQNAV-------P------GLTNK--LLS 133 (348)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHH----------cCCCEEEECCCCC-------c------cHHHH--HHH
Confidence 122456678889999999876555554444432 5688875433210 0 01111 124
Q ss_pred ccccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHH
Q 001292 352 SRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA 431 (1106)
Q Consensus 352 ~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~d 431 (1106)
+.+|.+++.+....... +..+|+| |+|. ..+.+.. .+..++++++.++|+++|+... .|+..
T Consensus 134 ~~~d~ii~~~~~~~~~~------~~~~i~n-~v~~---~~~~~~~----~~~~~~~~~~~~~i~~~gg~~~----~~~~~ 195 (348)
T TIGR01133 134 RFAKKVLISFPGAKDHF------EAVLVGN-PVRQ---EIRSLPV----PRERFGLREGKPTILVLGGSQG----AKILN 195 (348)
T ss_pred HHhCeeEECchhHhhcC------CceEEcC-CcCH---HHhcccc----hhhhcCCCCCCeEEEEECCchh----HHHHH
Confidence 56888888887554332 2368887 7875 2332221 1345788888889999986544 55543
Q ss_pred -HHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCC
Q 001292 432 -VAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQ 510 (1106)
Q Consensus 432 -lLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~ 510 (1106)
.+++|++.+.. +++++++++|+++. +.+++.++++++.+ .|.|. .. ++..+|+.||++|.+|
T Consensus 196 ~~l~~a~~~l~~---------~~~~~~~~~g~~~~---~~l~~~~~~~~l~~-~v~~~-~~-~~~~~l~~ad~~v~~~-- 258 (348)
T TIGR01133 196 ELVPKALAKLAE---------KGIQIVHQTGKNDL---EKVKNVYQELGIEA-IVTFI-DE-NMAAAYAAADLVISRA-- 258 (348)
T ss_pred HHHHHHHHHHhh---------cCcEEEEECCcchH---HHHHHHHhhCCceE-EecCc-cc-CHHHHHHhCCEEEECC--
Confidence 34567655532 23455566676642 77888888888864 56666 33 8999999999999753
Q ss_pred CCCCCcHHHHHHHHhCCCEEecCCCC-------chhhhccCCeEEEEcCCC--HHHHHHHHHHHHhCcccHHHHHHHHHH
Q 001292 511 VEQGFPSLIVRAMTFGIPVITPDFPI-------IKEYVAEGAQVIFFQKDN--PEGLSRAFSLFISNGKLSKFARTVASA 581 (1106)
Q Consensus 511 EeEGFGlvLLEAMA~G~PVIASD~gG-------I~EiV~Dg~nG~LV~~~D--~eeLAeAI~~LLsDpelRk~r~~mGe~ 581 (1106)
| |.+++|||++|+|||+++.++ ..+++.++.+|++++++| +++|+++|.++++|++. +++|+++
T Consensus 259 ---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~---~~~~~~~ 331 (348)
T TIGR01133 259 ---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPAN---LEAMAEA 331 (348)
T ss_pred ---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHH---HHHHHHH
Confidence 2 789999999999999998754 346788888999998876 99999999999999987 6889999
Q ss_pred HHHHHHHhcHHHHH
Q 001292 582 GRLHAKNMLALDCV 595 (1106)
Q Consensus 582 Are~ake~fsee~v 595 (1106)
+++++.++...+.+
T Consensus 332 ~~~~~~~~~~~~i~ 345 (348)
T TIGR01133 332 ARKLAKPDAAKRIA 345 (348)
T ss_pred HHhcCCccHHHHHH
Confidence 98887665555443
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3e-20 Score=212.27 Aligned_cols=322 Identities=10% Similarity=0.084 Sum_probs=217.7
Q ss_pred CCCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCC---C-----c-----------hHHHHH----------
Q 001292 221 RPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSG---N-----S-----------HSLWEQ---------- 271 (1106)
Q Consensus 221 r~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg---~-----~-----------~~i~r~---------- 271 (1106)
+.+||++++++. .+|...++..++++|+++|++|+++...-. + . ...|+.
T Consensus 3 ~~~rili~t~~~-G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 81 (380)
T PRK13609 3 KNPKVLILTAHY-GNGHVQVAKTLEQTFRQKGIKDVIVCDLFGESHPVITEITKYLYLKSYTIGKELYRLFYYGVEKIYD 81 (380)
T ss_pred CCCeEEEEEcCC-CchHHHHHHHHHHHHHhcCCCcEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccc
Confidence 567999999887 558888999999999999998655533110 0 0 000110
Q ss_pred -----------HhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhH
Q 001292 272 -----------IAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGF 340 (1106)
Q Consensus 272 -----------lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gl 340 (1106)
...+.++++..+||+|+++..... +..+.... ..++|++..+++....
T Consensus 82 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~-~~~~~~~~---------~~~ip~~~~~td~~~~----------- 140 (380)
T PRK13609 82 KKIFSWYANFGRKRLKLLLQAEKPDIVINTFPIIA-VPELKKQT---------GISIPTYNVLTDFCLH----------- 140 (380)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcCEEEEcChHHH-HHHHHHhc---------CCCCCeEEEeCCCCCC-----------
Confidence 112556777789999998654433 22222211 3568988665543211
Q ss_pred HhHHHHHHHHhccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEE-EE
Q 001292 341 QNLLSYWKSVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVV-VV 417 (1106)
Q Consensus 341 eklis~~~~~l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL-~V 417 (1106)
.. ..++.+|.+++.+...... ..+++++++.++++ +++. .|.+......++.+++++++.++++ +.
T Consensus 141 ~~------~~~~~ad~i~~~s~~~~~~l~~~gi~~~ki~v~G~-p~~~----~f~~~~~~~~~~~~~~l~~~~~~il~~~ 209 (380)
T PRK13609 141 KI------WVHREVDRYFVATDHVKKVLVDIGVPPEQVVETGI-PIRS----SFELKINPDIIYNKYQLCPNKKILLIMA 209 (380)
T ss_pred cc------cccCCCCEEEECCHHHHHHHHHcCCChhHEEEECc-ccCh----HHcCcCCHHHHHHHcCCCCCCcEEEEEc
Confidence 11 1246889999998665544 45677888888765 5543 3433223445788899987765554 45
Q ss_pred cccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHH
Q 001292 418 GSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGV 497 (1106)
Q Consensus 418 GRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~L 497 (1106)
|++.. .|+...+++++.. .+++++++++|.+.. +.+.++++++.++ + +|+|+|+.+++.++
T Consensus 210 G~~~~----~k~~~~li~~l~~-----------~~~~~~viv~G~~~~-~~~~l~~~~~~~~--~-~v~~~g~~~~~~~l 270 (380)
T PRK13609 210 GAHGV----LGNVKELCQSLMS-----------VPDLQVVVVCGKNEA-LKQSLEDLQETNP--D-ALKVFGYVENIDEL 270 (380)
T ss_pred CCCCC----CcCHHHHHHHHhh-----------CCCcEEEEEeCCCHH-HHHHHHHHHhcCC--C-cEEEEechhhHHHH
Confidence 65443 5788877777631 156776566675432 2477887777554 4 79999999999999
Q ss_pred HHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecC-CCCc----hhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccH
Q 001292 498 LLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD-FPII----KEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLS 572 (1106)
Q Consensus 498 yaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD-~gGI----~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelR 572 (1106)
|+.||+++. + ++|++++||||||+|||+++ .+|. .+++. .+|+.+...|+++|+++|.++++|++.
T Consensus 271 ~~~aD~~v~----~--~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~--~~G~~~~~~~~~~l~~~i~~ll~~~~~- 341 (380)
T PRK13609 271 FRVTSCMIT----K--PGGITLSEAAALGVPVILYKPVPGQEKENAMYFE--RKGAAVVIRDDEEVFAKTEALLQDDMK- 341 (380)
T ss_pred HHhccEEEe----C--CCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH--hCCcEEEECCHHHHHHHHHHHHCCHHH-
Confidence 999999884 2 56899999999999999986 5542 23443 345555668999999999999999987
Q ss_pred HHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 001292 573 KFARTVASAGRLHAKNMLALDCVTRYARILENV 605 (1106)
Q Consensus 573 k~r~~mGe~Are~ake~fsee~v~~Y~eLyesl 605 (1106)
+++|++++++....+.+++.++.+.++++..
T Consensus 342 --~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 342 --LLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred --HHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 6889999988877766666677777776543
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-19 Score=214.65 Aligned_cols=301 Identities=14% Similarity=0.140 Sum_probs=196.9
Q ss_pred cCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccc-----chhh------hh------hhHHhHH
Q 001292 282 EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANR-----LPVY------VE------RGFQNLL 344 (1106)
Q Consensus 282 ~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r-----~~~Y------~~------~glekli 344 (1106)
..++++|+|.++..+.....++.. ..+|+|+|+|.-.+... ...| .. .++....
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~---------~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~ 217 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRK---------VDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRY 217 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhC---------CCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHH
Confidence 578999999999988777776532 57899999997322111 1111 00 0000100
Q ss_pred HHHHHHhccccEEEecCCChhhh---hcCCCCCCEEEeCCCCCCcccccccCcchh----------------HHHHHHHc
Q 001292 345 SYWKSVFSRVNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSHE----------------KYQLRKEN 405 (1106)
Q Consensus 345 s~~~~~l~~AD~VIa~S~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s----------------~~~LR~~l 405 (1106)
+.-......||.++++|...... ..+.++++ |||| |+|+ +.|.+..+ +..++..+
T Consensus 218 ~iE~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~--ViPN-Gid~---~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~ 291 (590)
T cd03793 218 CIERAAAHCAHVFTTVSEITAYEAEHLLKRKPDV--VLPN-GLNV---KKFSALHEFQNLHAQSKEKINEFVRGHFYGHY 291 (590)
T ss_pred HHHHHHHhhCCEEEECChHHHHHHHHHhCCCCCE--EeCC-Ccch---hhcccchhhhhhhHHhhhhhhHHHHHHHhhhc
Confidence 01113456899999999765544 44666665 9998 8998 56654321 22356677
Q ss_pred CCCCCcEEEEE-EcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCcc----------HHHH---
Q 001292 406 GFLKDEIVVVV-VGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGY----------NDAL--- 471 (1106)
Q Consensus 406 GL~~d~~VIL~-VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY----------~eeL--- 471 (1106)
++.++++++++ +||+.+ .+||.+.+|+|+.+|............-+.| ++++.....+ .+++
T Consensus 292 ~~~~d~tli~f~~GR~e~---~nKGiDvlIeAl~rLn~~l~~~~~~~tVvaf-ii~p~~~~~~~~~~l~g~~~~~~l~~~ 367 (590)
T cd03793 292 DFDLDKTLYFFTAGRYEF---SNKGADMFLEALARLNYLLKVEGSDTTVVAF-FIMPAKTNNFNVESLKGQAVRKQLRDT 367 (590)
T ss_pred CCCCCCeEEEEEeecccc---ccCCHHHHHHHHHHHHHHHHhcCCCCeEEEE-EEecCccCCcCHHhhcchHHHHHHHHH
Confidence 88878888887 799754 3899999999999987543222211122334 4455432100 0111
Q ss_pred ----------------------------------------------------------------HHHHHHcCCCC-----
Q 001292 472 ----------------------------------------------------------------QEVASRLGLLE----- 482 (1106)
Q Consensus 472 ----------------------------------------------------------------keLaeklGL~d----- 482 (1106)
-..+++++|-+
T Consensus 368 ~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~dr 447 (590)
T cd03793 368 VNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDR 447 (590)
T ss_pred HHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCe
Confidence 11122222321
Q ss_pred CcEEEcC-C--------hhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCc----hhhhccC-CeEE
Q 001292 483 HSVRHYG-F--------NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPII----KEYVAEG-AQVI 548 (1106)
Q Consensus 483 ~rV~flG-~--------~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI----~EiV~Dg-~nG~ 548 (1106)
..|+|.+ + -.+..++|..||++|+||.+| +||++++||||||+|||+|+.+|+ .|++.++ ..|+
T Consensus 448 Vkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE--~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi 525 (590)
T cd03793 448 VKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYE--PWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGI 525 (590)
T ss_pred EEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccC--CCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceE
Confidence 2355555 1 134789999999999999997 999999999999999999999988 5666544 3577
Q ss_pred EEc-------CCCHHHHHHHHHHHHhCcccHHHHHHHHHHHH--HHHHHhcHHHHHHHHHHHHHHHhc
Q 001292 549 FFQ-------KDNPEGLSRAFSLFISNGKLSKFARTVASAGR--LHAKNMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 549 LV~-------~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Ar--e~ake~fsee~v~~Y~eLyeslLk 607 (1106)
++. +.++++|+++|.++++. .. ++.+..++. +.+..+.|++.+..|.+.|..++.
T Consensus 526 ~V~~r~~~~~~e~v~~La~~m~~~~~~-~~---r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 526 YIVDRRFKSPDESVQQLTQYMYEFCQL-SR---RQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred EEecCCccchHHHHHHHHHHHHHHhCC-cH---HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 775 45688899999998854 44 355555544 778888889999999999987764
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.9e-21 Score=192.17 Aligned_cols=169 Identities=20% Similarity=0.329 Sum_probs=148.3
Q ss_pred HHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHH
Q 001292 398 KYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASR 477 (1106)
Q Consensus 398 ~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaek 477 (1106)
++..+...+...++++|+++|++.+ .|+++.+++|+..+..+. .++++ ++|+|.++. ...++.+++.
T Consensus 2 ~~~~~~~~~~~~~~~~il~~g~~~~----~K~~~~li~a~~~l~~~~------~~~~~-l~i~G~~~~--~~~~~~~~~~ 68 (172)
T PF00534_consen 2 KDKLREKLKIPDKKKIILFIGRLDP----EKGIDLLIEAFKKLKEKK------NPNYK-LVIVGDGEY--KKELKNLIEK 68 (172)
T ss_dssp HHHHHHHTTT-TTSEEEEEESESSG----GGTHHHHHHHHHHHHHHH------HTTEE-EEEESHCCH--HHHHHHHHHH
T ss_pred hHHHHHHcCCCCCCeEEEEEecCcc----ccCHHHHHHHHHHHHhhc------CCCeE-EEEEccccc--cccccccccc
Confidence 4667888889899999999999888 899999999998887531 16776 789997774 4889999999
Q ss_pred cCCCCCcEEEcCChh--hHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCH
Q 001292 478 LGLLEHSVRHYGFNG--DVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNP 555 (1106)
Q Consensus 478 lGL~d~rV~flG~~e--DL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~ 555 (1106)
+++.+ +|.++|... ++..+|..||++|+||..| +||++++|||++|+|||+++.++..+++.++.+|+++++.|+
T Consensus 69 ~~~~~-~i~~~~~~~~~~l~~~~~~~di~v~~s~~e--~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~ 145 (172)
T PF00534_consen 69 LNLKE-NIIFLGYVPDDELDELYKSSDIFVSPSRNE--GFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDI 145 (172)
T ss_dssp TTCGT-TEEEEESHSHHHHHHHHHHTSEEEE-BSSB--SS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSH
T ss_pred ccccc-cccccccccccccccccccceecccccccc--ccccccccccccccceeeccccCCceeeccccceEEeCCCCH
Confidence 99987 999999775 9999999999999999986 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCcccHHHHHHHHHHHHHH
Q 001292 556 EGLSRAFSLFISNGKLSKFARTVASAGRLH 585 (1106)
Q Consensus 556 eeLAeAI~~LLsDpelRk~r~~mGe~Are~ 585 (1106)
++++++|.++++++++ ++.|+++++++
T Consensus 146 ~~l~~~i~~~l~~~~~---~~~l~~~~~~~ 172 (172)
T PF00534_consen 146 EELADAIEKLLNDPEL---RQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCHHH---HHHHHHHhcCC
Confidence 9999999999999987 68899999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.4e-20 Score=216.65 Aligned_cols=285 Identities=11% Similarity=0.029 Sum_probs=193.1
Q ss_pred CccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCC
Q 001292 283 QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDY 362 (1106)
Q Consensus 283 ~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~ 362 (1106)
..|+|++|.|...++..+..+.. ...|+++..|-.--+.. .+...+..+.+ ...+-.+|.|.+++.
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~---------~~~~i~~f~HipfP~~e-~~~~lp~~~~l----l~~~l~~D~igF~t~ 196 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERG---------PDARIGFFLHIPFPSSE-IFRCLPWREEL----LRGLLGADLIGFQTE 196 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhC---------CCCeEEEEEeCCCCChH-HHhhCCChHHH----HHHHhcCCEEEECCH
Confidence 45799999998888777765432 46789998886311100 01111000111 122446788887774
Q ss_pred Chhhh-------hcC------------CCCCCEEEeCCCCCCcccccccCcchh----HHHHHHHcCCCCCcEEEEEEcc
Q 001292 363 TLPML-------YSV------------LDAGNFFVIPGSPADVWAVEAYSKSHE----KYQLRKENGFLKDEIVVVVVGS 419 (1106)
Q Consensus 363 ~~~~~-------~~g------------i~~~KI~VIpN~GVDl~~~e~F~ps~s----~~~LR~~lGL~~d~~VIL~VGR 419 (1106)
..... ..+ -...++.++|+ |||. +.|.+... ....++..+..+++++|+++||
T Consensus 197 ~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~-GID~---~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgR 272 (460)
T cd03788 197 RYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPI-GIDP---DAFRKLAASPEVQERAAELRERLGGRKLIVGVDR 272 (460)
T ss_pred HHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeC-eEcH---HHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecC
Confidence 43322 001 11235788897 8998 56654311 1223333455668889999999
Q ss_pred cCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcC-----CCC--ccHHHHHHHHHHcCCCC-----CcEE-
Q 001292 420 SFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN-----STD--GYNDALQEVASRLGLLE-----HSVR- 486 (1106)
Q Consensus 420 l~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~-----Gpe--rY~eeLkeLaeklGL~d-----~rV~- 486 (1106)
+.+ .||++.+++|++.++++++.. ..+++ |+++|. +++ .+.+++++++.+++... ..|+
T Consensus 273 l~~----~Kgi~~ll~A~~~ll~~~p~~---~~~v~-Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~ 344 (460)
T cd03788 273 LDY----SKGIPERLLAFERLLERYPEW---RGKVV-LVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRY 344 (460)
T ss_pred ccc----cCCHHHHHHHHHHHHHhChhh---cCCEE-EEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEE
Confidence 998 999999999999887544211 11355 455543 232 13345555555443210 1354
Q ss_pred EcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCC----EEecCCCCchhhhccCCeEEEEcCCCHHHHHH
Q 001292 487 HYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIP----VITPDFPIIKEYVAEGAQVIFFQKDNPEGLSR 560 (1106)
Q Consensus 487 flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~P----VIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAe 560 (1106)
+.| +.+++..+|+.||++++||..| |||++++||||||+| ||+++.+|..+. +.+|+++++.|++++++
T Consensus 345 ~~g~v~~~el~~~y~~aDv~v~pS~~E--g~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~~~la~ 419 (460)
T cd03788 345 LYRSLPREELAALYRAADVALVTPLRD--GMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDIDEVAD 419 (460)
T ss_pred EeCCCCHHHHHHHHHhccEEEeCcccc--ccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCHHHHHH
Confidence 445 5689999999999999999987 999999999999999 999999998887 36899999999999999
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHH
Q 001292 561 AFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYAR 600 (1106)
Q Consensus 561 AI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~e 600 (1106)
+|.++++++.. .++.++.++++.+.++.+...++.|..
T Consensus 420 ai~~~l~~~~~--e~~~~~~~~~~~v~~~~~~~w~~~~l~ 457 (460)
T cd03788 420 AIHRALTMPLE--ERRERHRKLREYVRTHDVQAWANSFLD 457 (460)
T ss_pred HHHHHHcCCHH--HHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999998753 267888999999988777777777654
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.2e-19 Score=209.51 Aligned_cols=281 Identities=11% Similarity=0.067 Sum_probs=193.6
Q ss_pred cEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCCh
Q 001292 285 SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTL 364 (1106)
Q Consensus 285 DiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~ 364 (1106)
|+|.+|.|...++..+..+.. ...++.+..|-- +...-.+...+.-+. ....+-.+|.|.+++...
T Consensus 129 d~vwvhDYhl~l~p~~lr~~~---------~~~~igfFlHip-fP~~e~f~~lp~r~~----il~gll~~dligF~t~~~ 194 (456)
T TIGR02400 129 DIVWVHDYHLMLLPAMLRELG---------VQNKIGFFLHIP-FPSSEIYRTLPWRRE----LLEGLLAYDLVGFQTYDD 194 (456)
T ss_pred CEEEEecchhhHHHHHHHhhC---------CCCeEEEEEeCC-CCChHHHhhCCcHHH----HHHHHhcCCEEEECCHHH
Confidence 588889999988888877543 456777777752 111111101100111 223456899999988665
Q ss_pred hhh-------hcCC-----------CCCCEEEeCCCCCCcccccccCcch-------hHHHHHHHcCCCCCcEEEEEEcc
Q 001292 365 PML-------YSVL-----------DAGNFFVIPGSPADVWAVEAYSKSH-------EKYQLRKENGFLKDEIVVVVVGS 419 (1106)
Q Consensus 365 ~~~-------~~gi-----------~~~KI~VIpN~GVDl~~~e~F~ps~-------s~~~LR~~lGL~~d~~VIL~VGR 419 (1106)
... ..+. ...++.++|+ |||+ +.|.+.. ....+|+.++ ++++|+++||
T Consensus 195 ~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~-GID~---~~f~~~~~~~~~~~~~~~lr~~~~---~~~vIl~VgR 267 (456)
T TIGR02400 195 ARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPI-GIDV---DRFAEQAKKPSVQKRIAELRESLK---GRKLIIGVDR 267 (456)
T ss_pred HHHHHHHHHHHhCCcccCCceEECCcEEEEEEecC-cCCH---HHHHHHhcChhHHHHHHHHHHHcC---CCeEEEEccc
Confidence 433 1111 2335778897 8998 6665421 1224566653 6789999999
Q ss_pred cCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEE----cCCCCccHHHHHHHHHHc--------CCCC-CcEE
Q 001292 420 SFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLC----GNSTDGYNDALQEVASRL--------GLLE-HSVR 486 (1106)
Q Consensus 420 l~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIV----G~GperY~eeLkeLaekl--------GL~d-~rV~ 486 (1106)
+.. .||+..+++|++.++++++.. ..++.+++++ |++++ ...+++.++++ +..+ .-|+
T Consensus 268 Ld~----~KGi~~ll~A~~~ll~~~p~~---~~~v~Lv~v~~p~rg~~~~--~~~l~~~i~~lv~~in~~~~~~~~~pv~ 338 (456)
T TIGR02400 268 LDY----SKGLPERLLAFERFLEEHPEW---RGKVVLVQIAVPSRGDVPE--YQQLRRQVEELVGRINGRFGTLDWTPIR 338 (456)
T ss_pred ccc----ccCHHHHHHHHHHHHHhCccc---cCceEEEEEecCCccCchH--HHHHHHHHHHHHHHHHhccCCCCCccEE
Confidence 988 899999999999887644211 1235544444 23343 25555555443 1111 0144
Q ss_pred Ec-C--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCC----EEecCCCCchhhhccCCeEEEEcCCCHHHHH
Q 001292 487 HY-G--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIP----VITPDFPIIKEYVAEGAQVIFFQKDNPEGLS 559 (1106)
Q Consensus 487 fl-G--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~P----VIASD~gGI~EiV~Dg~nG~LV~~~D~eeLA 559 (1106)
+. | ..+++..+|++||++++||..| |||++++||||||+| ||+|+++|..+.+. +|+++++.|++++|
T Consensus 339 ~l~~~~~~~el~aly~aaDv~vv~S~~E--G~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA 413 (456)
T TIGR02400 339 YLNRSYDREELMALYRAADVGLVTPLRD--GMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMA 413 (456)
T ss_pred EEcCCCCHHHHHHHHHhCcEEEECcccc--ccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHH
Confidence 44 4 4589999999999999999987 999999999999999 99999999999883 79999999999999
Q ss_pred HHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 001292 560 RAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 602 (1106)
Q Consensus 560 eAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLy 602 (1106)
++|.++++++.. ++++..+++++.+.++.+...++.|..-+
T Consensus 414 ~aI~~aL~~~~~--er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 414 DAIARALTMPLE--EREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred HHHHHHHcCCHH--HHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 999999997653 36778888899988877777777776544
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3e-18 Score=198.05 Aligned_cols=324 Identities=14% Similarity=0.168 Sum_probs=216.4
Q ss_pred CCCEEEEEeCCCCCChhHHHHHHHHHHHHHCC---CEEEEEEcC--CCC-ch---------------HHHH---------
Q 001292 221 RPPRIGLILGNMAKDSRSLLLITVVKNLQKLG---YVFKIYAVR--SGN-SH---------------SLWE--------- 270 (1106)
Q Consensus 221 r~~RIalVlg~L~~gGesl~vv~LakaLqe~G---yeVtV~t~~--dg~-~~---------------~i~r--------- 270 (1106)
+.+||++++.+.+ +|-..++..|.++|++.| .+|.++-.- .++ .. .+|.
T Consensus 4 ~~~~vlil~~~~G-~GH~~aA~al~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~Y~~~~~~~p~~y~~~y~~~~~~ 82 (391)
T PRK13608 4 QNKKILIITGSFG-NGHMQVTQSIVNQLNDMNLDHLSVIEHDLFMEAHPILTSICKKWYINSFKYFRNMYKGFYYSRPDK 82 (391)
T ss_pred CCceEEEEECCCC-chHHHHHHHHHHHHHhhCCCCceEEEeehHHhcCchHHHHHHHHHHHHHHHhHHHHHHHHHcCchh
Confidence 3468999998874 455677888999999885 456655431 111 11 1111
Q ss_pred ---------HHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHH
Q 001292 271 ---------QIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQ 341 (1106)
Q Consensus 271 ---------~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gle 341 (1106)
....+.++++..+||+|++..+... +..+.... ..++|++..+++.... .
T Consensus 83 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~p~~~-~~~l~~~~---------~~~iP~~~v~td~~~~-----------~ 141 (391)
T PRK13608 83 LDKCFYKYYGLNKLINLLIKEKPDLILLTFPTPV-MSVLTEQF---------NINIPVATVMTDYRLH-----------K 141 (391)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCcCEEEECCcHHH-HHHHHHhc---------CCCCCEEEEeCCCCcc-----------c
Confidence 0012456777789999998655432 22222211 2578987654443111 1
Q ss_pred hHHHHHHHHhccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEE-EEEc
Q 001292 342 NLLSYWKSVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVV-VVVG 418 (1106)
Q Consensus 342 klis~~~~~l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VI-L~VG 418 (1106)
. | ..+.+|.+++.+...... ..+++++++.++++ +++. .|.........+.+++++++.+++ +++|
T Consensus 142 ~----w--~~~~~d~~~v~s~~~~~~l~~~gi~~~ki~v~Gi-Pv~~----~f~~~~~~~~~~~~~~l~~~~~~ilv~~G 210 (391)
T PRK13608 142 N----W--ITPYSTRYYVATKETKQDFIDVGIDPSTVKVTGI-PIDN----KFETPIDQKQWLIDNNLDPDKQTILMSAG 210 (391)
T ss_pred c----c--ccCCCCEEEECCHHHHHHHHHcCCCHHHEEEECe-ecCh----HhcccccHHHHHHHcCCCCCCCEEEEECC
Confidence 1 1 135788888888665444 45778888988775 6764 454333345677889998766554 5677
Q ss_pred ccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHH
Q 001292 419 SSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVL 498 (1106)
Q Consensus 419 Rl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~Ly 498 (1106)
++.. .|+++.+++++.. ..+++++++++|.++. ..+++.+..+..+ +|++.|+.+++.++|
T Consensus 211 ~lg~----~k~~~~li~~~~~----------~~~~~~~vvv~G~~~~----l~~~l~~~~~~~~-~v~~~G~~~~~~~~~ 271 (391)
T PRK13608 211 AFGV----SKGFDTMITDILA----------KSANAQVVMICGKSKE----LKRSLTAKFKSNE-NVLILGYTKHMNEWM 271 (391)
T ss_pred Cccc----chhHHHHHHHHHh----------cCCCceEEEEcCCCHH----HHHHHHHHhccCC-CeEEEeccchHHHHH
Confidence 6654 5788888887521 1156776667776542 1233333344444 799999999999999
Q ss_pred HHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecC-CCC----chhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHH
Q 001292 499 LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD-FPI----IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSK 573 (1106)
Q Consensus 499 aaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD-~gG----I~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk 573 (1106)
+.||++|.. ++|++++||||+|+|+|+++ .++ ...++.+...|++ +.|+++++++|.++++|++.
T Consensus 272 ~~aDl~I~k------~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~--~~~~~~l~~~i~~ll~~~~~-- 341 (391)
T PRK13608 272 ASSQLMITK------PGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI--ADTPEEAIKIVASLTNGNEQ-- 341 (391)
T ss_pred HhhhEEEeC------CchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE--eCCHHHHHHHHHHHhcCHHH--
Confidence 999999952 56899999999999999986 333 2344545555654 46899999999999999987
Q ss_pred HHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 001292 574 FARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 574 ~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk 607 (1106)
+.+|++++++..+.+.+...++.+.++++.+..
T Consensus 342 -~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 342 -LTNMISTMEQDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred -HHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhh
Confidence 689999999998887778888888888876543
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.9e-19 Score=201.46 Aligned_cols=277 Identities=16% Similarity=0.152 Sum_probs=186.2
Q ss_pred HHHHhhccCccEEEEcccc-HHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhcc
Q 001292 275 QISILGQEQYSLIDWSIFD-GIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSR 353 (1106)
Q Consensus 275 lvkiIr~~~pDiIh~~~~~-~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~ 353 (1106)
+.++++..+||+|+++.+. ..+...+..+.. .....++|++.++++..... .. ...+.
T Consensus 92 l~~~i~~~~pDvIi~thp~~~~~~~~~l~~~~-----~~~~~~~p~~~~~tD~~~~~----------~~------w~~~~ 150 (382)
T PLN02605 92 VAKGLMKYKPDIIVSVHPLMQHVPLRVLRWQG-----KELGKKIPFTTVVTDLGTCH----------PT------WFHKG 150 (382)
T ss_pred HHHHHHhcCcCEEEEeCcCcccCHHHHHHHHh-----hccCCCCCEEEEECCCCCcC----------cc------cccCC
Confidence 4567788899999884422 111111111110 00025789887766541010 00 11468
Q ss_pred ccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHH
Q 001292 354 VNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA 431 (1106)
Q Consensus 354 AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~d 431 (1106)
+|.+++++...... ..+++++++.++++ +++. +.+.+...+..+|+++|++++.++|+++|+... .|+..
T Consensus 151 ~d~~~~~s~~~~~~l~~~g~~~~ki~v~g~-~v~~---~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g----~~~~~ 222 (382)
T PLN02605 151 VTRCFCPSEEVAKRALKRGLEPSQIRVYGL-PIRP---SFARAVRPKDELRRELGMDEDLPAVLLMGGGEG----MGPLE 222 (382)
T ss_pred CCEEEECCHHHHHHHHHcCCCHHHEEEECc-ccCH---hhccCCCCHHHHHHHcCCCCCCcEEEEECCCcc----cccHH
Confidence 89999988665443 45788889999875 7875 222223345678999999999999999997554 78888
Q ss_pred HHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCC
Q 001292 432 VAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQV 511 (1106)
Q Consensus 432 lLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~E 511 (1106)
.+++++..+... .....+++++++++|+++.. .+.+++. .... +|+++|+.+++.++|++||++|.+
T Consensus 223 ~li~~l~~~~~~---~~~~~~~~~~~vi~G~~~~~-~~~L~~~----~~~~-~v~~~G~~~~~~~l~~aaDv~V~~---- 289 (382)
T PLN02605 223 ETARALGDSLYD---KNLGKPIGQVVVICGRNKKL-QSKLESR----DWKI-PVKVRGFVTNMEEWMGACDCIITK---- 289 (382)
T ss_pred HHHHHHHHhhcc---ccccCCCceEEEEECCCHHH-HHHHHhh----cccC-CeEEEeccccHHHHHHhCCEEEEC----
Confidence 888888654310 00112456667888977431 2444433 2233 799999999999999999999975
Q ss_pred CCCCcHHHHHHHHhCCCEEecCC------CCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhC-cccHHHHHHHHHHHHH
Q 001292 512 EQGFPSLIVRAMTFGIPVITPDF------PIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN-GKLSKFARTVASAGRL 584 (1106)
Q Consensus 512 eEGFGlvLLEAMA~G~PVIASD~------gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsD-pelRk~r~~mGe~Are 584 (1106)
++|.+++||||||+|||+++. ++. +.+.++..|+++ .|+++|+++|.++++| ++. +++|++++++
T Consensus 290 --~g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~g~~~--~~~~~la~~i~~ll~~~~~~---~~~m~~~~~~ 361 (382)
T PLN02605 290 --AGPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNGFGAFS--ESPKEIARIVAEWFGDKSDE---LEAMSENALK 361 (382)
T ss_pred --CCcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCCceeec--CCHHHHHHHHHHHHcCCHHH---HHHHHHHHHH
Confidence 347899999999999999984 444 444444566654 7999999999999998 765 6889999999
Q ss_pred HHHHhcHHHHHHHHHHH
Q 001292 585 HAKNMLALDCVTRYARI 601 (1106)
Q Consensus 585 ~ake~fsee~v~~Y~eL 601 (1106)
.+....+.+.++.+.++
T Consensus 362 ~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 362 LARPEAVFDIVHDLHEL 378 (382)
T ss_pred hcCCchHHHHHHHHHHH
Confidence 88777766666554443
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-17 Score=196.35 Aligned_cols=357 Identities=15% Similarity=0.150 Sum_probs=245.8
Q ss_pred CEEEEEeCCCCC----ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHHH-----------------------------
Q 001292 223 PRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLW----------------------------- 269 (1106)
Q Consensus 223 ~RIalVlg~L~~----gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i~----------------------------- 269 (1106)
++|+++..++.+ ||..-.+-.|.++|+++|++|.|+.+........+
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 356666666544 89999999999999999999988865321100000
Q ss_pred --------------H--------------HHh----HHHHHhhc----cCccEEEEccccHHHHHHHHHHHhhhhcccCC
Q 001292 270 --------------E--------------QIA----GQISILGQ----EQYSLIDWSIFDGIIADSLEAKEAISSLMQEP 313 (1106)
Q Consensus 270 --------------r--------------~lg----~lvkiIr~----~~pDiIh~~~~~~i~v~~La~k~~idII~te~ 313 (1106)
. .+. ..+..+.. ..+|+||+|.+...++....+... ..
T Consensus 81 ~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~------~~ 154 (487)
T COG0297 81 GGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTGLLPAYLKQRY------RS 154 (487)
T ss_pred CCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHHHHHHHHhhcc------cc
Confidence 0 000 01122211 369999999999999887777531 11
Q ss_pred CCCCcEEEEEcCCcccccch------------hhhhhhHH--hHHHHHHHHhccccEEEecCCChhhh-h---c------
Q 001292 314 FHSIPLVWIIQEDSLANRLP------------VYVERGFQ--NLLSYWKSVFSRVNVIVFPDYTLPML-Y---S------ 369 (1106)
Q Consensus 314 ~~gIPVI~tIHna~Ls~r~~------------~Y~~~gle--klis~~~~~l~~AD~VIa~S~~~~~~-~---~------ 369 (1106)
...+|.|+|+||........ .|...+++ ..+...+..+..+|.|.++|...... + .
T Consensus 155 ~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g 234 (487)
T COG0297 155 GYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEG 234 (487)
T ss_pred cccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHHHhhccccccccchh
Confidence 25789999999932211111 00000000 11133345678999999988654433 1 0
Q ss_pred --CCCCCCEEEeCCCCCCcccccccCc------------------chhHHHHHHHcCCCC--CcEEEEEEcccCcccccc
Q 001292 370 --VLDAGNFFVIPGSPADVWAVEAYSK------------------SHEKYQLRKENGFLK--DEIVVVVVGSSFFYNELS 427 (1106)
Q Consensus 370 --gi~~~KI~VIpN~GVDl~~~e~F~p------------------s~s~~~LR~~lGL~~--d~~VIL~VGRl~~y~kg~ 427 (1106)
.....++.-|-| |+|. +...| ..++..+++.+|++. +.|++.++||+.. +
T Consensus 235 ~l~~~~~~l~GI~N-giD~---~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~----Q 306 (487)
T COG0297 235 LLSWRSGKLSGILN-GIDY---DLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTA----Q 306 (487)
T ss_pred hhhhccccEEEEEe-eEEe---cccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeecccc----c
Confidence 011245666766 6764 22222 134567788899873 5689999999987 9
Q ss_pred CCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhh-HHHHHHHcCeEEE
Q 001292 428 WDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGD-VNGVLLMADIVLY 506 (1106)
Q Consensus 428 Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eD-L~~LyaaADVfV~ 506 (1106)
|+++++++++..++++ .++ +++.|.|+..+.+.+..+++.+... .....|+.+. ...+|+.||++++
T Consensus 307 KG~dl~~~~i~~~l~~---------~~~-~vilG~gd~~le~~~~~la~~~~~~--~~~~i~~~~~la~~i~agaD~~lm 374 (487)
T COG0297 307 KGLDLLLEAIDELLEQ---------GWQ-LVLLGTGDPELEEALRALASRHPGR--VLVVIGYDEPLAHLIYAGADVILM 374 (487)
T ss_pred cchhHHHHHHHHHHHh---------Cce-EEEEecCcHHHHHHHHHHHHhcCce--EEEEeeecHHHHHHHHhcCCEEEe
Confidence 9999999999888752 256 6889999666778888888866441 3444555544 5799999999999
Q ss_pred ccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhcc--------CCeEEEEcCCCHHHHHHHHHHHHh---CcccHHHH
Q 001292 507 GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE--------GAQVIFFQKDNPEGLSRAFSLFIS---NGKLSKFA 575 (1106)
Q Consensus 507 PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~D--------g~nG~LV~~~D~eeLAeAI~~LLs---DpelRk~r 575 (1106)
||.+| ++|++-++||.+|+++|+..+||.++.|.+ ..+|+++.+.|+++|+.+|.+.+. ++.. ..
T Consensus 375 PSrfE--PcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~--~w 450 (487)
T COG0297 375 PSRFE--PCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPL--LW 450 (487)
T ss_pred CCcCc--CCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHH--HH
Confidence 99997 999999999999999999999999999886 469999998999999999998765 3332 02
Q ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCC
Q 001292 576 RTVASAGRLHAKNMLALDCVTRYARILENVLNFPSD 611 (1106)
Q Consensus 576 ~~mGe~Are~ake~fsee~v~~Y~eLyeslLk~Ps~ 611 (1106)
+.+..++.. .+++|+..+..|.++|+.++..+-.
T Consensus 451 ~~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~~~~ 484 (487)
T COG0297 451 RKVQPNAMG--ADFSWDLSAKEYVELYKPLLSKPFW 484 (487)
T ss_pred HHHHHhhcc--cccCchhHHHHHHHHHHHHhccccc
Confidence 344444444 4778889999999999999886543
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-16 Score=181.96 Aligned_cols=326 Identities=15% Similarity=0.123 Sum_probs=198.9
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch----------------HH----------HHHHhHHH
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH----------------SL----------WEQIAGQI 276 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~----------------~i----------~r~lg~lv 276 (1106)
+||+++.|. .|.-++...+++.|++.++++.+++....... .. ...+..+.
T Consensus 2 ~ki~i~~Gg---t~G~i~~a~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 78 (380)
T PRK00025 2 LRIAIVAGE---VSGDLLGAGLIRALKARAPNLEFVGVGGPRMQAAGCESLFDMEELAVMGLVEVLPRLPRLLKIRRRLK 78 (380)
T ss_pred ceEEEEecC---cCHHHHHHHHHHHHHhcCCCcEEEEEccHHHHhCCCccccCHHHhhhccHHHHHHHHHHHHHHHHHHH
Confidence 466666544 23344444599999998888888875431110 11 11222356
Q ss_pred HHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccE
Q 001292 277 SILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNV 356 (1106)
Q Consensus 277 kiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~ 356 (1106)
++++..+||+++.+.+...... +..... ..++|+++..++.... +. ... .....+.+|.
T Consensus 79 ~~l~~~kPdivi~~~~~~~~~~-~a~~a~--------~~~ip~i~~~~~~~~~-~~--------~~~---~~~~~~~~d~ 137 (380)
T PRK00025 79 RRLLAEPPDVFIGIDAPDFNLR-LEKKLR--------KAGIPTIHYVSPSVWA-WR--------QGR---AFKIAKATDH 137 (380)
T ss_pred HHHHHcCCCEEEEeCCCCCCHH-HHHHHH--------HCCCCEEEEeCCchhh-cC--------chH---HHHHHHHHhh
Confidence 7788899999998765332221 111111 2579999876653211 00 111 1123456788
Q ss_pred EEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEE-cccCccccccCCHHHHHH
Q 001292 357 IVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVV-GSSFFYNELSWDYAVAMH 435 (1106)
Q Consensus 357 VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~V-GRl~~y~kg~Kg~dlLLe 435 (1106)
+++.+......+.... .++.+++| ++.. .......+..++.+++++++.++++.+ |+... +..+....+++
T Consensus 138 i~~~~~~~~~~~~~~g-~~~~~~G~-p~~~----~~~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~--~~~~~~~~l~~ 209 (380)
T PRK00025 138 VLALFPFEAAFYDKLG-VPVTFVGH-PLAD----AIPLLPDRAAARARLGLDPDARVLALLPGSRGQ--EIKRLLPPFLK 209 (380)
T ss_pred heeCCccCHHHHHhcC-CCeEEECc-CHHH----hcccccChHHHHHHcCCCCCCCEEEEECCCCHH--HHHHHHHHHHH
Confidence 8888876555432221 23667666 3321 111112245678889998777765544 42211 10123567777
Q ss_pred HHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHc-CCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCC
Q 001292 436 DVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRL-GLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQG 514 (1106)
Q Consensus 436 A~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaekl-GL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEG 514 (1106)
++..+.++ .|+++ ++++|.++. +.+.++++++++ ++. |.+.+ +++..+|+.||++|++|
T Consensus 210 a~~~l~~~-------~~~~~-~ii~~~~~~-~~~~~~~~~~~~~~~~---v~~~~--~~~~~~~~~aDl~v~~s------ 269 (380)
T PRK00025 210 AAQLLQQR-------YPDLR-FVLPLVNPK-RREQIEEALAEYAGLE---VTLLD--GQKREAMAAADAALAAS------ 269 (380)
T ss_pred HHHHHHHh-------CCCeE-EEEecCChh-hHHHHHHHHhhcCCCC---eEEEc--ccHHHHHHhCCEEEECc------
Confidence 77666532 26777 456655333 247788888766 553 55543 58999999999999986
Q ss_pred CcHHHHHHHHhCCCEEec-----------------CCCCchhhhccCC--eEEEEcCCCHHHHHHHHHHHHhCcccHHHH
Q 001292 515 FPSLIVRAMTFGIPVITP-----------------DFPIIKEYVAEGA--QVIFFQKDNPEGLSRAFSLFISNGKLSKFA 575 (1106)
Q Consensus 515 FGlvLLEAMA~G~PVIAS-----------------D~gGI~EiV~Dg~--nG~LV~~~D~eeLAeAI~~LLsDpelRk~r 575 (1106)
|.+.+|||++|+|||++ +.+++++++.++. .+++.+..|+++|+++|.++++|+++ +
T Consensus 270 -G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~---~ 345 (380)
T PRK00025 270 -GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGAR---R 345 (380)
T ss_pred -cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHH---H
Confidence 67888999999999987 4566677776653 45666778999999999999999998 5
Q ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 001292 576 RTVASAGRLHAKNMLALDCVTRYARILENV 605 (1106)
Q Consensus 576 ~~mGe~Are~ake~fsee~v~~Y~eLyesl 605 (1106)
++|++++.+..+.. ......+..+++.++
T Consensus 346 ~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~ 374 (380)
T PRK00025 346 QALLEGFTELHQQL-RCGADERAAQAVLEL 374 (380)
T ss_pred HHHHHHHHHHHHHh-CCCHHHHHHHHHHHH
Confidence 78888876655543 333444555554443
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-16 Score=164.75 Aligned_cols=223 Identities=20% Similarity=0.189 Sum_probs=158.1
Q ss_pred EEEeCCCC--CChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHHHHHHhHHHHHhhccCccEEEEccccHHHHHHHHHH
Q 001292 226 GLILGNMA--KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAK 303 (1106)
Q Consensus 226 alVlg~L~--~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i~r~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k 303 (1106)
+++..... .+|.......+++.|.+.|++|++++ .. .......++..++|+|+.+.............
T Consensus 2 ~~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~v~~----~~------~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~ 71 (229)
T cd01635 2 LLVSTPLLPGGGGVELVLLDLAKALARRGHEVEVVA----LL------LLLLLRILRGFKPDVVHAHGYYPAPLALLLAA 71 (229)
T ss_pred eeeccccCCCCCCchhHHHHHHHHHHHcCCeEEEEE----ec------hHHHHHHHhhcCCCEEEEcCCCcHHHHHHHHH
Confidence 44444444 57889999999999999999999998 11 11123455567999999988776555431211
Q ss_pred HhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhhhcCCCCCCEEEeCCCC
Q 001292 304 EAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSP 383 (1106)
Q Consensus 304 ~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~G 383 (1106)
. ..++|++++.|+......... . .+ .....+..+
T Consensus 72 ~---------~~~~~~i~~~h~~~~~~~~~~--~---~~---~~~~~~~~~----------------------------- 105 (229)
T cd01635 72 R---------LLGIPLVLTVHGVNRSLLEGV--P---LS---LLALSIGLA----------------------------- 105 (229)
T ss_pred h---------hCCCCEEEEEcCccHhhcccC--c---HH---HHHHHHhhc-----------------------------
Confidence 1 267899999999621110000 0 00 000000000
Q ss_pred CCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCC
Q 001292 384 ADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNS 463 (1106)
Q Consensus 384 VDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~G 463 (1106)
...++|++.. .|+.+.+++++..+.++. ++++ ++++|.+
T Consensus 106 -----------------------------~~~~~g~~~~----~k~~~~~~~a~~~l~~~~-------~~~~-~~i~G~~ 144 (229)
T cd01635 106 -----------------------------DKVFVGRLAP----EKGLDDLIEAFALLKERG-------PDLK-LVIAGDG 144 (229)
T ss_pred -----------------------------ceEEEEeecc----cCCHHHHHHHHHHHHHhC-------CCeE-EEEEeCC
Confidence 0118887776 789999999998876432 6788 5778887
Q ss_pred CCccHHHHHHHHHHcCCCCCcEEEcCC---hhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhh
Q 001292 464 TDGYNDALQEVASRLGLLEHSVRHYGF---NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEY 540 (1106)
Q Consensus 464 perY~eeLkeLaeklGL~d~rV~flG~---~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~Ei 540 (1106)
... ...+..+.+.+..+ +|.+.|. .+++..+++.||++++||..| ++|++++|||++|+|||+++.++..|+
T Consensus 145 ~~~--~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e--~~~~~~~Eam~~g~pvi~s~~~~~~e~ 219 (229)
T cd01635 145 PER--EYLEELLAALLLLD-RVIFLGGLDPEELLALLLAAADVFVLPSLRE--GFGLVVLEAMACGLPVIATDVGGPPEI 219 (229)
T ss_pred CCh--HHHHHHHHhcCCcc-cEEEeCCCCcHHHHHHHhhcCCEEEeccccc--CcChHHHHHHhCCCCEEEcCCCCcceE
Confidence 764 56666567778776 9999996 356677777799999999987 999999999999999999999999999
Q ss_pred hccCCeEEEE
Q 001292 541 VAEGAQVIFF 550 (1106)
Q Consensus 541 V~Dg~nG~LV 550 (1106)
+.++.+|+++
T Consensus 220 i~~~~~g~~~ 229 (229)
T cd01635 220 VEDGLTGLLV 229 (229)
T ss_pred EECCCceEEC
Confidence 9898899864
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.8e-17 Score=190.08 Aligned_cols=238 Identities=18% Similarity=0.152 Sum_probs=169.7
Q ss_pred HhccccEEEecCCChhhh----hcCCCCCCEEEeCCCCCCcccccccCc-----c-hhHHHHHHHcCCCCCcEEEEEEcc
Q 001292 350 VFSRVNVIVFPDYTLPML----YSVLDAGNFFVIPGSPADVWAVEAYSK-----S-HEKYQLRKENGFLKDEIVVVVVGS 419 (1106)
Q Consensus 350 ~l~~AD~VIa~S~~~~~~----~~gi~~~KI~VIpN~GVDl~~~e~F~p-----s-~s~~~LR~~lGL~~d~~VIL~VGR 419 (1106)
....++.+++.++..... ...+...++.+++. .+|. +.+.+ . ......|...+....+..+..+-+
T Consensus 206 ~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~-ei~~---s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~ 281 (495)
T KOG0853|consen 206 TTGLAWKILVNSYFTKRQFKATFVSLSNSDITSTYP-EIDG---SWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINR 281 (495)
T ss_pred hhhccceEecchhhhhhhhhhhhhhcCCCCcceeec-cccc---hhccccccccchhcccccceeeeecccceEeeeeee
Confidence 355777888777655443 22334444555553 4665 33322 1 122333455566666777787877
Q ss_pred cCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCC--------CCccHHHHHHHHHHcCCCCCcEEEcCCh
Q 001292 420 SFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNS--------TDGYNDALQEVASRLGLLEHSVRHYGFN 491 (1106)
Q Consensus 420 l~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~G--------perY~eeLkeLaeklGL~d~rV~flG~~ 491 (1106)
+.+ .|++.++++++..+...... ..-++.+ ++++|+. .-.|..++.++++++++....|.|+..+
T Consensus 282 ~~p----gkd~~l~l~a~~~~~~~i~~--~~~~~~h-l~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~ 354 (495)
T KOG0853|consen 282 FEP----GKDQDLALPAFTLLHDSIPE--PSISSEH-LVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPST 354 (495)
T ss_pred cCC----CCCceeehhhHHhhhcccCC--CCCCceE-EEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCC
Confidence 777 78999999999877654422 1224556 5666621 1127889999999999953388888876
Q ss_pred hhHHHHHHHcC--eEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHH---HHHHHHHHHH
Q 001292 492 GDVNGVLLMAD--IVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPE---GLSRAFSLFI 566 (1106)
Q Consensus 492 eDL~~LyaaAD--VfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~e---eLAeAI~~LL 566 (1106)
.+...|..++| ++++....| .||++++||||||+|||++|.||..|+|.++.+|+++++ +.+ .+|++|.++.
T Consensus 355 ~~~~~yrl~adt~~v~~qPa~E--~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~ 431 (495)
T KOG0853|consen 355 TRVAKYRLAADTKGVLYQPANE--HFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLR 431 (495)
T ss_pred chHHHHHHHHhcceEEecCCCC--CccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHh
Confidence 66665655555 444444445 999999999999999999999999999999999999998 555 6999999999
Q ss_pred hCcccHHHHHHHHHHHHHHHHHhcHHHHHH-HHHHHHHH
Q 001292 567 SNGKLSKFARTVASAGRLHAKNMLALDCVT-RYARILEN 604 (1106)
Q Consensus 567 sDpelRk~r~~mGe~Are~ake~fsee~v~-~Y~eLyes 604 (1106)
.||++ ..+|+++|++.+++.|++.... +..+++..
T Consensus 432 ~~p~l---~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~ 467 (495)
T KOG0853|consen 432 RDPEL---WARMGKNGLKRVKEMFSWQHYSERIASVLGK 467 (495)
T ss_pred cCHHH---HHHHHHHHHHHHHHHHhHHHHHHHHHHHhHh
Confidence 99999 5899999999999977764443 66655553
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.4e-16 Score=175.84 Aligned_cols=245 Identities=14% Similarity=0.107 Sum_probs=158.7
Q ss_pred CCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCc
Q 001292 315 HSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSK 394 (1106)
Q Consensus 315 ~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~p 394 (1106)
.+.++||.+++.- ...... . ..........++.+|.|++.+........... .++.+||| |+|. +.|.+
T Consensus 121 ~~~~~Vyd~~D~~-~~~~~~-~----~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~~~-~~i~~i~n-gvd~---~~f~~ 189 (373)
T cd04950 121 QASLVVYDCVDDL-SAFPGG-P----PELLEAERRLLKRADLVFTTSPSLYEAKRRLN-PNVVLVPN-GVDY---EHFAA 189 (373)
T ss_pred CCCeEEEEcccch-hccCCC-C----HHHHHHHHHHHHhCCEEEECCHHHHHHHhhCC-CCEEEccc-ccCH---HHhhc
Confidence 5678888877731 111110 0 11122334568899999999987776543333 68999998 7998 56654
Q ss_pred chhHH-HHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHH
Q 001292 395 SHEKY-QLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQE 473 (1106)
Q Consensus 395 s~s~~-~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLke 473 (1106)
..... ..+.. ...+.++++|+|++.. .++.+++.++.+ ..|+++ ++++|.++.. .....
T Consensus 190 ~~~~~~~~~~~--~~~~~~~i~y~G~l~~----~~d~~ll~~la~-----------~~p~~~-~vliG~~~~~--~~~~~ 249 (373)
T cd04950 190 ARDPPPPPADL--AALPRPVIGYYGAIAE----WLDLELLEALAK-----------ARPDWS-FVLIGPVDVS--IDPSA 249 (373)
T ss_pred ccccCCChhHH--hcCCCCEEEEEecccc----ccCHHHHHHHHH-----------HCCCCE-EEEECCCcCc--cChhH
Confidence 32111 01111 2236779999998876 456655443331 127888 6888887322 11211
Q ss_pred HHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccCCC---CCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEE
Q 001292 474 VASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQV---EQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVI 548 (1106)
Q Consensus 474 LaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~~E---eEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~ 548 (1106)
+ ... + +|+++|.. +++..+|+.+|++++|+..+ ..++|++++||||||+|||+++.+++.+ ....++
T Consensus 250 ~---~~~-~-nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~---~~~~~~ 321 (373)
T cd04950 250 L---LRL-P-NVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRR---YEDEVV 321 (373)
T ss_pred h---ccC-C-CEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHh---hcCcEE
Confidence 1 123 3 89999965 79999999999999998532 1368999999999999999998765544 333344
Q ss_pred EEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHH
Q 001292 549 FFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILEN 604 (1106)
Q Consensus 549 LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyes 604 (1106)
+.++|+++++++|.+++.++... ... +++..++++.|+..++++...+.+
T Consensus 322 -~~~~d~~~~~~ai~~~l~~~~~~--~~~---~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 322 -LIADDPEEFVAAIEKALLEDGPA--RER---RRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred -EeCCCHHHHHHHHHHHHhcCCch--HHH---HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 44579999999999977655431 111 222378888899888888865553
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=199.44 Aligned_cols=286 Identities=10% Similarity=0.077 Sum_probs=195.3
Q ss_pred cEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCCh
Q 001292 285 SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTL 364 (1106)
Q Consensus 285 DiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~ 364 (1106)
|+|-+|.|...++..+..+.. ..+++.+..|-- +...-.+...+.-+. ....+-.+|.|-+++...
T Consensus 149 d~vWvhDYhL~llp~~lR~~~---------~~~~igfFlHiP-FPs~e~fr~lp~r~~----il~gll~aDligF~t~~y 214 (797)
T PLN03063 149 DVVWCHDYHLMFLPQYLKEYN---------NKMKVGWFLHTP-FPSSEIYKTLPSRSE----LLRAVLTADLIGFHTYDF 214 (797)
T ss_pred CEEEEecchhhhHHHHHHHhC---------CCCcEEEEecCC-CCCHHHHhhCCCHHH----HHHHHhcCCEEEeCCHHH
Confidence 577779999888887777543 567788777773 110001100100011 123355788888877554
Q ss_pred hhh-------hcCC-----------CCCCEEEeCCCCCCcccccccCcch-------hHHHHHHHcCCCCCcEEEEEEcc
Q 001292 365 PML-------YSVL-----------DAGNFFVIPGSPADVWAVEAYSKSH-------EKYQLRKENGFLKDEIVVVVVGS 419 (1106)
Q Consensus 365 ~~~-------~~gi-----------~~~KI~VIpN~GVDl~~~e~F~ps~-------s~~~LR~~lGL~~d~~VIL~VGR 419 (1106)
... ..+. ...++.++|+ |||. +.|.+.. ....+++.++ ++++|+++||
T Consensus 215 ~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~-GID~---~~f~~~~~~~~~~~~~~~lr~~~~---~~~lIl~VgR 287 (797)
T PLN03063 215 ARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPI-GIDP---ERFINTCELPEVKQHMKELKRFFA---GRKVILGVDR 287 (797)
T ss_pred HHHHHHHHHHHhCccccCCceEECCeEEEEEEEec-ccCH---HHHHHHhcChhHHHHHHHHHHhcC---CCeEEEEecc
Confidence 433 0111 1135778897 8998 5554321 1123444443 6779999999
Q ss_pred cCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEc----CCCCccHHHHHHHHHHcC--CCC-------CcEE
Q 001292 420 SFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCG----NSTDGYNDALQEVASRLG--LLE-------HSVR 486 (1106)
Q Consensus 420 l~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG----~GperY~eeLkeLaeklG--L~d-------~rV~ 486 (1106)
+.. .||+..+|+|++.+++.++... .++.++.++| ++++ .+.+++.+++++ +.. .-|+
T Consensus 288 Ld~----~KGi~~lL~Afe~lL~~~P~~~---~kvvLvqia~psr~~~~~--y~~l~~~v~~l~g~In~~~g~~~~~pv~ 358 (797)
T PLN03063 288 LDM----IKGIPQKYLAFEKFLEENPEWR---DKVMLVQIAVPTRNDVPE--YQKLKSQVHELVGRINGRFGSVSSVPIH 358 (797)
T ss_pred ccc----ccCHHHHHHHHHHHHHhCcccc---CcEEEEEEecCCCCchHH--HHHHHHHHHHHHHHhhcccccCCCceeE
Confidence 988 8999999999999886542111 1233322332 2333 355666666553 221 1133
Q ss_pred EcC---ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCC----EEecCCCCchhhhccCCeEEEEcCCCHHHHH
Q 001292 487 HYG---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIP----VITPDFPIIKEYVAEGAQVIFFQKDNPEGLS 559 (1106)
Q Consensus 487 flG---~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~P----VIASD~gGI~EiV~Dg~nG~LV~~~D~eeLA 559 (1106)
+++ +.+++..+|++||++|+||..| |||++++||||||+| +|+|+++|..+.+ +.+|++++|.|++++|
T Consensus 359 ~l~~~v~~~el~aly~~ADvfvvtSlrE--GmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA 434 (797)
T PLN03063 359 HLDCSVDFNYLCALYAITDVMLVTSLRD--GMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWNITEVS 434 (797)
T ss_pred EecCCCCHHHHHHHHHhCCEEEeCcccc--ccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCCHHHHH
Confidence 333 4478999999999999999997 999999999999999 9999999999987 5679999999999999
Q ss_pred HHHHHHHhCc-ccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 001292 560 RAFSLFISNG-KLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 560 eAI~~LLsDp-elRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk 607 (1106)
++|.++++.+ +. +++..+++++.+.++.+...+..+.+.|+.+..
T Consensus 435 ~AI~~aL~m~~~e---r~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 435 SAIKEALNMSDEE---RETRHRHNFQYVKTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred HHHHHHHhCCHHH---HHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhh
Confidence 9999999944 44 567788899999999999888888887776644
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.9e-16 Score=176.35 Aligned_cols=260 Identities=13% Similarity=0.079 Sum_probs=164.2
Q ss_pred HHHHhhccCccEEEEccc-cHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHh-c
Q 001292 275 QISILGQEQYSLIDWSIF-DGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVF-S 352 (1106)
Q Consensus 275 lvkiIr~~~pDiIh~~~~-~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l-~ 352 (1106)
+.++++..+||+||++.. ...+...+..+. .++|++.+-++..........+. ... +..+ +
T Consensus 78 l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~----------~~ipv~h~~~g~~s~~~~~~~~~-----~~~--r~~~~~ 140 (365)
T TIGR00236 78 LEELLLEEKPDIVLVQGDTTTTLAGALAAFY----------LQIPVGHVEAGLRTGDRYSPMPE-----EIN--RQLTGH 140 (365)
T ss_pred HHHHHHHcCCCEEEEeCCchHHHHHHHHHHH----------hCCCEEEEeCCCCcCCCCCCCcc-----HHH--HHHHHH
Confidence 667888899999999963 344555555542 68998755322211111100011 011 1111 2
Q ss_pred cccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcc-hhHHHHHHHcCCCCCcEEEEEEcccCccccccCC
Q 001292 353 RVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKS-HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD 429 (1106)
Q Consensus 353 ~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps-~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg 429 (1106)
.+|.+++++....+. ..+++++++.+++|..+|. ...... .....++++++. +..++++.+.... ...|+
T Consensus 141 ~ad~~~~~s~~~~~~l~~~G~~~~~I~vign~~~d~---~~~~~~~~~~~~~~~~~~~--~~~~vl~~~hr~~--~~~k~ 213 (365)
T TIGR00236 141 IADLHFAPTEQAKDNLLRENVKADSIFVTGNTVIDA---LLTNVEIAYSSPVLSEFGE--DKRYILLTLHRRE--NVGEP 213 (365)
T ss_pred HHHhccCCCHHHHHHHHHcCCCcccEEEeCChHHHH---HHHHHhhccchhHHHhcCC--CCCEEEEecCchh--hhhhH
Confidence 478888888766554 4588888999999854564 111111 113445666663 3345555543221 11367
Q ss_pred HHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEc
Q 001292 430 YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYG 507 (1106)
Q Consensus 430 ~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~P 507 (1106)
...+++|+..+..+. |+++ ++++|.+.. .....+.+.++..+ +|+|+|+. .++..+|+.||+++.+
T Consensus 214 ~~~ll~a~~~l~~~~-------~~~~-~vi~~~~~~---~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~l~~ad~vv~~ 281 (365)
T TIGR00236 214 LENIFKAIREIVEEF-------EDVQ-IVYPVHLNP---VVREPLHKHLGDSK-RVHLIEPLEYLDFLNLAANSHLILTD 281 (365)
T ss_pred HHHHHHHHHHHHHHC-------CCCE-EEEECCCCh---HHHHHHHHHhCCCC-CEEEECCCChHHHHHHHHhCCEEEEC
Confidence 899999998776432 6776 444433221 12223444456655 89999955 4678999999999877
Q ss_pred cCCCCCCCcHHHHHHHHhCCCEEec-CCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHH
Q 001292 508 SSQVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAG 582 (1106)
Q Consensus 508 S~~EeEGFGlvLLEAMA~G~PVIAS-D~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~A 582 (1106)
| |..++|||+||+|||++ +.++..+.+.++ .+++++ .|+++++++|.++++|++. +++|+.+.
T Consensus 282 S-------g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv~-~d~~~i~~ai~~ll~~~~~---~~~~~~~~ 345 (365)
T TIGR00236 282 S-------GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLVG-TDKENITKAAKRLLTDPDE---YKKMSNAS 345 (365)
T ss_pred C-------hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEeC-CCHHHHHHHHHHHHhChHH---HHHhhhcC
Confidence 6 34579999999999996 778888888766 556664 7999999999999999886 46666554
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.2e-15 Score=189.80 Aligned_cols=285 Identities=9% Similarity=0.076 Sum_probs=186.6
Q ss_pred cEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCCh
Q 001292 285 SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTL 364 (1106)
Q Consensus 285 DiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~ 364 (1106)
|+|-+|.|...++..+..+.. ...++-+..|-- +...-.+...+..+. ....+-.+|.|-+++...
T Consensus 135 d~vwvhDYhl~l~p~~lr~~~---------~~~~igfFlH~p-fP~~~~f~~lp~~~~----ll~~ll~~Dligf~t~~~ 200 (726)
T PRK14501 135 DVVWVHDYQLMLLPAMLRERL---------PDARIGFFLHIP-FPSFEVFRLLPWREE----ILEGLLGADLIGFHTYDY 200 (726)
T ss_pred CEEEEeCchhhhHHHHHHhhC---------CCCcEEEEeeCC-CCChHHHhhCCChHH----HHHHHhcCCeEEeCCHHH
Confidence 577789999888887776542 456677666662 111000000100011 122345788888877553
Q ss_pred hhh-------hcCC-----------CCCCEEEeCCCCCCcccccccCcch-------hHHHHHHHcCCCCCcEEEEEEcc
Q 001292 365 PML-------YSVL-----------DAGNFFVIPGSPADVWAVEAYSKSH-------EKYQLRKENGFLKDEIVVVVVGS 419 (1106)
Q Consensus 365 ~~~-------~~gi-----------~~~KI~VIpN~GVDl~~~e~F~ps~-------s~~~LR~~lGL~~d~~VIL~VGR 419 (1106)
... ..+. ...++.++|+ |||+ +.|.+.. ....+|..+ +++++|++|||
T Consensus 201 ~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~-GID~---~~f~~~~~~~~~~~~~~~lr~~~---~~~~~il~VgR 273 (726)
T PRK14501 201 VRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPM-GIDY---DKFHNSAQDPEVQEEIRRLRQDL---RGRKIILSIDR 273 (726)
T ss_pred HHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEEC-eEcH---HHHHHHhcCchHHHHHHHHHHHc---CCCEEEEEecC
Confidence 322 1110 1124678887 8998 6665431 112244443 46779999999
Q ss_pred cCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEc----CC-CCc--cHHHHHHHHHHcC-------CCCCcE
Q 001292 420 SFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCG----NS-TDG--YNDALQEVASRLG-------LLEHSV 485 (1106)
Q Consensus 420 l~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG----~G-per--Y~eeLkeLaeklG-------L~d~rV 485 (1106)
+.. .||+..+++|+..+++.++.. ..++++ +++| ++ ++. +...+.+++.+++ ... .+
T Consensus 274 l~~----~Kgi~~~l~A~~~ll~~~p~~---~~~v~l-v~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~p-v~ 344 (726)
T PRK14501 274 LDY----TKGIPRRLLAFERFLEKNPEW---RGKVRL-VQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTP-IH 344 (726)
T ss_pred ccc----ccCHHHHHHHHHHHHHhCccc---cCCEEE-EEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcce-EE
Confidence 998 999999999999887644211 123564 5554 22 221 1233334433322 111 34
Q ss_pred EEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhC-----CCEEecCCCCchhhhccCCeEEEEcCCCHHHH
Q 001292 486 RHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFG-----IPVITPDFPIIKEYVAEGAQVIFFQKDNPEGL 558 (1106)
Q Consensus 486 ~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G-----~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeL 558 (1106)
.+.| +.+++..+|+.||++++||..| |||++++|||||| +||++...|+..+++ .|++++|.|++++
T Consensus 345 ~~~~~~~~~~l~~ly~~aDv~v~~S~~E--G~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d~~~l 418 (726)
T PRK14501 345 YFYRSLPFEELVALYRAADVALVTPLRD--GMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPNDIEGI 418 (726)
T ss_pred EEeCCCCHHHHHHHHHhccEEEeccccc--ccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCCHHHH
Confidence 5666 5589999999999999999987 9999999999994 466666667777765 4899999999999
Q ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 001292 559 SRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 559 AeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk 607 (1106)
|++|.++++++.. .+.....++++.+.++.+...++.|.+.|+++.+
T Consensus 419 a~ai~~~l~~~~~--e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~ 465 (726)
T PRK14501 419 AAAIKRALEMPEE--EQRERMQAMQERLRRYDVHKWASDFLDELREAAE 465 (726)
T ss_pred HHHHHHHHcCCHH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 9999999997642 1344456788899888888999999999887654
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.7e-14 Score=162.94 Aligned_cols=299 Identities=15% Similarity=0.070 Sum_probs=191.0
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHHC-CCEEEEEEcCCCC---c---------------------------hHHHHHH
Q 001292 224 RIGLILGNMAKDSRSLLLITVVKNLQKL-GYVFKIYAVRSGN---S---------------------------HSLWEQI 272 (1106)
Q Consensus 224 RIalVlg~L~~gGesl~vv~LakaLqe~-GyeVtV~t~~dg~---~---------------------------~~i~r~l 272 (1106)
||++|+|. -++-..+.+++++|++. ++++.++.++... . .......
T Consensus 1 ~i~~~~gt---r~~~~~~~pl~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 77 (363)
T cd03786 1 KILVVTGT---RPEYIKLAPLIRALKKDPGFELVLVVTGQHYDMEMGVTFFEILFIIKPDYDLLLGSDSQSLGAQTAGLL 77 (363)
T ss_pred CEEEEEec---CHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCChhhhHHHHHhhCCCCCCEEEecCCCCCCHHHHHHHHH
Confidence 35555544 24556778888989887 8888876553210 0 0011111
Q ss_pred hHHHHHhhccCccEEEEccccH-HHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccc-ccchhhhhhhHHhHHHHHHHH
Q 001292 273 AGQISILGQEQYSLIDWSIFDG-IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLA-NRLPVYVERGFQNLLSYWKSV 350 (1106)
Q Consensus 273 g~lvkiIr~~~pDiIh~~~~~~-i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls-~r~~~Y~~~gleklis~~~~~ 350 (1106)
..+.+.++..+||+||++.... .+...+..+. .++|++.+.|+.... ..... .. ... ..
T Consensus 78 ~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~----------~~iPvv~~~~g~~s~~~~~~~------~~-~r~--~~ 138 (363)
T cd03786 78 IGLEAVLLEEKPDLVLVLGDTNETLAAALAAFK----------LGIPVAHVEAGLRSFDRGMPD------EE-NRH--AI 138 (363)
T ss_pred HHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHH----------cCCCEEEEecccccCCCCCCc------hH-HHH--HH
Confidence 2245667778999999986433 3334444432 589988765553211 01111 10 001 12
Q ss_pred hccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchh-HHHHHHHcCCCCCcEEEEEEcccCcccccc
Q 001292 351 FSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHE-KYQLRKENGFLKDEIVVVVVGSSFFYNELS 427 (1106)
Q Consensus 351 l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s-~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~ 427 (1106)
.+.+|.+++++...... ..+++++++.+++|..+|. ..+.+... ....+..++++++.++++++|+..... ..
T Consensus 139 ~~~ad~~~~~s~~~~~~l~~~G~~~~kI~vign~v~d~---~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~~-~~ 214 (363)
T cd03786 139 DKLSDLHFAPTEEARRNLLQEGEPPERIFVVGNTMIDA---LLRLLELAKKELILELLGLLPKKYILVTLHRVENVD-DG 214 (363)
T ss_pred HHHhhhccCCCHHHHHHHHHcCCCcccEEEECchHHHH---HHHHHHhhccchhhhhcccCCCCEEEEEeCCccccC-Ch
Confidence 34678888888665554 4578888999999844564 12211111 122345678877777777888755311 35
Q ss_pred CCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCC-CCCcEEEcC--ChhhHHHHHHHcCeE
Q 001292 428 WDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGL-LEHSVRHYG--FNGDVNGVLLMADIV 504 (1106)
Q Consensus 428 Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL-~d~rV~flG--~~eDL~~LyaaADVf 504 (1106)
|+.+.+++|++.+.. .++. +++.|.++.+ +.+++.+.++++ .+ +|.|.| +..++..+|+.||++
T Consensus 215 k~~~~l~~al~~l~~---------~~~~-vi~~~~~~~~--~~l~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~~~ad~~ 281 (363)
T cd03786 215 EQLEEILEALAELAE---------EDVP-VVFPNHPRTR--PRIREAGLEFLGHHP-NVLLISPLGYLYFLLLLKNADLV 281 (363)
T ss_pred HHHHHHHHHHHHHHh---------cCCE-EEEECCCChH--HHHHHHHHhhccCCC-CEEEECCcCHHHHHHHHHcCcEE
Confidence 789999999976642 1344 4555555544 788888888876 44 899997 457899999999999
Q ss_pred EEccCCCCCCCcHHHHHHHHhCCCEEecCC-CCchhhhccCCeEEEEcCC-CHHHHHHHHHHHHhCccc
Q 001292 505 LYGSSQVEQGFPSLIVRAMTFGIPVITPDF-PIIKEYVAEGAQVIFFQKD-NPEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 505 V~PS~~EeEGFGlvLLEAMA~G~PVIASD~-gGI~EiV~Dg~nG~LV~~~-D~eeLAeAI~~LLsDpel 571 (1106)
|.+|. | ++.|||++|+|||+++. +..++.++ +|..+... |+++++++|..+++++..
T Consensus 282 v~~Sg------g-i~~Ea~~~g~PvI~~~~~~~~~~~~~---~g~~~~~~~~~~~i~~~i~~ll~~~~~ 340 (363)
T cd03786 282 LTDSG------G-IQEEASFLGVPVLNLRDRTERPETVE---SGTNVLVGTDPEAILAAIEKLLSDEFA 340 (363)
T ss_pred EEcCc------c-HHhhhhhcCCCEEeeCCCCccchhhh---eeeEEecCCCHHHHHHHHHHHhcCchh
Confidence 99872 3 47999999999999864 44666664 44444433 799999999999999876
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-13 Score=146.75 Aligned_cols=223 Identities=22% Similarity=0.339 Sum_probs=164.9
Q ss_pred ccEEEecCCChhhh-hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCc--EEEEEEcccCccccccCCH
Q 001292 354 VNVIVFPDYTLPML-YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDE--IVVVVVGSSFFYNELSWDY 430 (1106)
Q Consensus 354 AD~VIa~S~~~~~~-~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~--~VIL~VGRl~~y~kg~Kg~ 430 (1106)
.+.++..+...... .......++.++++ +++. +.+... ..++..+. .+++++|++.+ .|+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~--------~~~~~~~~~~~~i~~~g~~~~----~k~~ 214 (381)
T COG0438 151 ADRVIAVSPALKELLEALGVPNKIVVIPN-GIDT---EKFAPA--------RIGLLPEGGKFVVLYVGRLDP----EKGL 214 (381)
T ss_pred ccEEEECCHHHHHHHHHhCCCCCceEecC-CcCH---HHcCcc--------ccCCCcccCceEEEEeeccCh----hcCH
Confidence 56666666543232 12222235777776 6776 333221 22333333 69999998776 7899
Q ss_pred HHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChh--hHHHHHHHcCeEEEcc
Q 001292 431 AVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNG--DVNGVLLMADIVLYGS 508 (1106)
Q Consensus 431 dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~e--DL~~LyaaADVfV~PS 508 (1106)
+.+++++..+.... +++. ++++|.++.. .+.+..++.+.+..+ .|.++|... ++..+++.||++++||
T Consensus 215 ~~~i~~~~~~~~~~-------~~~~-~~~~g~~~~~-~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~~~~~v~ps 284 (381)
T COG0438 215 DLLIEAAAKLKKRG-------PDIK-LVIVGDGPER-REELEKLAKKLGLED-NVKFLGYVPDEELAELLASADVFVLPS 284 (381)
T ss_pred HHHHHHHHHhhhhc-------CCeE-EEEEcCCCcc-HHHHHHHHHHhCCCC-cEEEecccCHHHHHHHHHhCCEEEecc
Confidence 99999998776422 3356 6888988863 356777888888766 899999654 7888999999999999
Q ss_pred CCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH-
Q 001292 509 SQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAK- 587 (1106)
Q Consensus 509 ~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ak- 587 (1106)
..| +||++++|||++|+|||+++.++..+++.++.+|++++..|++++++++..++++++. .+.++..+++.+.
T Consensus 285 ~~e--~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~ 359 (381)
T COG0438 285 LSE--GFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPEL---REELGEAARERVEE 359 (381)
T ss_pred ccc--cchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHH
Confidence 886 9999999999999999999999999999887778877777899999999999999854 5667765555554
Q ss_pred HhcHHHHHHHHHHHHHHHhc
Q 001292 588 NMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 588 e~fsee~v~~Y~eLyeslLk 607 (1106)
.+.|......+.+++.....
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 360 EFSWERIAEQLLELYEELLA 379 (381)
T ss_pred hcCHHHHHHHHHHHHHHHHh
Confidence 55566666688888887653
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.6e-14 Score=158.69 Aligned_cols=287 Identities=12% Similarity=0.053 Sum_probs=181.8
Q ss_pred ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHHHHHHhHHHHHhhccCc-cEEEEccccHH---HHHHHHHHHhhhhcc
Q 001292 235 DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQY-SLIDWSIFDGI---IADSLEAKEAISSLM 310 (1106)
Q Consensus 235 gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i~r~lg~lvkiIr~~~p-DiIh~~~~~~i---~v~~La~k~~idII~ 310 (1106)
.+...+-.++.+.+.+.|++...+...+.......+....+..++...++ |+||++.+... +...+..+..
T Consensus 15 ~a~~ka~~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k----- 89 (333)
T PRK09814 15 SAALKAKNDVTKIAKQLGFEELGIYFYNIKRDSLSERSKRLDGILASLKPGDIVIFQFPTWNGFEFDRLFVDKLK----- 89 (333)
T ss_pred chHHHHHHHHHHHHHHCCCeEeEEEecccccchHHHHHHHHHHHHhcCCCCCEEEEECCCCchHHHHHHHHHHHH-----
Confidence 57888999999999999999876654332111111111112334555566 88888654321 1122222221
Q ss_pred cCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCccc
Q 001292 311 QEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWA 388 (1106)
Q Consensus 311 te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~ 388 (1106)
+.++|+|+++|+.... +... . ..........++.+|.++++|...... ..+++..++.++++ ++..
T Consensus 90 ---~~~~k~i~~ihD~~~~-~~~~--~---~~~~~~~~~~~~~aD~iI~~S~~~~~~l~~~g~~~~~i~~~~~--~~~~- 157 (333)
T PRK09814 90 ---KKQVKIIILIHDIEPL-RFDS--N---YYLMKEEIDMLNLADVLIVHSKKMKDRLVEEGLTTDKIIVQGI--FDYL- 157 (333)
T ss_pred ---HcCCEEEEEECCcHHH-hccc--c---chhhHHHHHHHHhCCEEEECCHHHHHHHHHcCCCcCceEeccc--cccc-
Confidence 1479999999994211 1110 0 000112245678999999999776665 34666667777765 3320
Q ss_pred ccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccH
Q 001292 389 VEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYN 468 (1106)
Q Consensus 389 ~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~ 468 (1106)
.... .+. .....++|+|+|++.. .. .+.. ..++++ ++++|+|++.
T Consensus 158 -~~~~-------~~~---~~~~~~~i~yaG~l~k------~~--~l~~-------------~~~~~~-l~i~G~g~~~-- 202 (333)
T PRK09814 158 -NDIE-------LVK---TPSFQKKINFAGNLEK------SP--FLKN-------------WSQGIK-LTVFGPNPED-- 202 (333)
T ss_pred -cccc-------ccc---cccCCceEEEecChhh------ch--HHHh-------------cCCCCe-EEEECCCccc--
Confidence 0010 010 1224568999997653 11 1110 125677 6889999865
Q ss_pred HHHHHHHHHcCCCCCcEEEcCC--hhhHHHHHHHcCeEEEccCC-------C--CCCCcHHHHHHHHhCCCEEecCCCCc
Q 001292 469 DALQEVASRLGLLEHSVRHYGF--NGDVNGVLLMADIVLYGSSQ-------V--EQGFPSLIVRAMTFGIPVITPDFPII 537 (1106)
Q Consensus 469 eeLkeLaeklGL~d~rV~flG~--~eDL~~LyaaADVfV~PS~~-------E--eEGFGlvLLEAMA~G~PVIASD~gGI 537 (1106)
. ...+ +|.|.|. .+++..+|+. |+.+++... + .-.+|+++.|+||||+|||+++.+++
T Consensus 203 ~---------~~~~-~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~ 271 (333)
T PRK09814 203 L---------ENSA-NISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAI 271 (333)
T ss_pred c---------ccCC-CeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccH
Confidence 2 2344 8999994 4789999988 765554311 0 01579999999999999999999999
Q ss_pred hhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH
Q 001292 538 KEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA 591 (1106)
Q Consensus 538 ~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fs 591 (1106)
.++|.++.+|++++ +.++++++|..+. + +. +.+|++++++.++....
T Consensus 272 ~~~V~~~~~G~~v~--~~~el~~~l~~~~-~-~~---~~~m~~n~~~~~~~~~~ 318 (333)
T PRK09814 272 ADFIVENGLGFVVD--SLEELPEIIDNIT-E-EE---YQEMVENVKKISKLLRN 318 (333)
T ss_pred HHHHHhCCceEEeC--CHHHHHHHHHhcC-H-HH---HHHHHHHHHHHHHHHhc
Confidence 99999999999997 7889999999863 2 22 58899999998866543
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.9e-13 Score=159.54 Aligned_cols=281 Identities=7% Similarity=-0.002 Sum_probs=190.7
Q ss_pred cEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCCh
Q 001292 285 SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTL 364 (1106)
Q Consensus 285 DiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~ 364 (1106)
|+|-+|.|...++..+..+.. ...++-+..|-- +...-.+...+.-+. ....+-.+|.|-+++...
T Consensus 134 d~vWVhDYhL~llp~~LR~~~---------~~~~IgfFlHiP-FPs~eifr~LP~r~~----ll~glL~aDliGFqt~~y 199 (487)
T TIGR02398 134 ATVWVHDYNLWLVPGYIRQLR---------PDLKIAFFHHTP-FPSADVFNILPWREQ----IIGSLLCCDYIGFHIPRY 199 (487)
T ss_pred CEEEEecchhhHHHHHHHHhC---------CCCeEEEEeeCC-CCChHHHhhCCchHH----HHHHHhcCCeEEeCCHHH
Confidence 577779999888887776543 345666666662 110000000100011 123345888888887654
Q ss_pred hhh-------hcCCCC-----------------------------CC---EEEeCCCCCCcccccccCcc-------hhH
Q 001292 365 PML-------YSVLDA-----------------------------GN---FFVIPGSPADVWAVEAYSKS-------HEK 398 (1106)
Q Consensus 365 ~~~-------~~gi~~-----------------------------~K---I~VIpN~GVDl~~~e~F~ps-------~s~ 398 (1106)
... ..++.. ++ +.++|. |||. +.|.+. ...
T Consensus 200 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~Pi-GID~---~~f~~~~~~~~~~~~~ 275 (487)
T TIGR02398 200 VENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPV-GTDP---ERIRSALAAASIREMM 275 (487)
T ss_pred HHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEEC-EecH---HHHHHHhcCchHHHHH
Confidence 432 111100 11 456774 8998 555332 123
Q ss_pred HHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCC-----C--ccHHHH
Q 001292 399 YQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNST-----D--GYNDAL 471 (1106)
Q Consensus 399 ~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gp-----e--rY~eeL 471 (1106)
..+|++++ ++.+|+.++|+.. .||....++|+.++++++++.. .++. |+++|... + .+..++
T Consensus 276 ~~lr~~~~---~~kiIl~VDRLDy----~KGI~~kl~Afe~~L~~~Pe~~---gkv~-Lvqi~~psr~~v~~y~~l~~~v 344 (487)
T TIGR02398 276 ERIRSELA---GVKLILSAERVDY----TKGILEKLNAYERLLERRPELL---GKVT-LVTACVPAASGMTIYDELQGQI 344 (487)
T ss_pred HHHHHHcC---CceEEEEeccccc----ccCHHHHHHHHHHHHHhCcccc---CceE-EEEEeCCCcccchHHHHHHHHH
Confidence 45777777 6789999999998 8999999999999987653221 2456 45555432 1 134666
Q ss_pred HHHHHHc-------CCCCCcEEEcCC--hhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCC----CEEecCCCCch
Q 001292 472 QEVASRL-------GLLEHSVRHYGF--NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI----PVITPDFPIIK 538 (1106)
Q Consensus 472 keLaekl-------GL~d~rV~flG~--~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~----PVIASD~gGI~ 538 (1106)
++++.+. +..+ .+.+.+. .+++..+|+.|||++++|..| |++++..|+|||+. |+|.|.++|..
T Consensus 345 ~~~v~~IN~~fg~~~~~p-v~~~~~~v~~~el~alYr~ADV~lvT~lrD--GmNLVa~Eyva~~~~~~GvLILSefaGaa 421 (487)
T TIGR02398 345 EQAVGRINGRFARIGWTP-LQFFTRSLPYEEVSAWFAMADVMWITPLRD--GLNLVAKEYVAAQGLLDGVLVLSEFAGAA 421 (487)
T ss_pred HHHHHHHhhccCCCCCcc-EEEEcCCCCHHHHHHHHHhCCEEEECcccc--ccCcchhhHHhhhcCCCCCEEEeccccch
Confidence 6766664 4454 5777784 488999999999999999997 99999999999999 99999999999
Q ss_pred hhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 001292 539 EYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 602 (1106)
Q Consensus 539 EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLy 602 (1106)
+.+ ..+++++|.|++++|++|.++++.|.. ++++-.+..++.+..+.....++.+..-+
T Consensus 422 ~~l---~~AllVNP~d~~~~A~ai~~AL~m~~~--Er~~R~~~l~~~v~~~d~~~W~~~fl~~l 480 (487)
T TIGR02398 422 VEL---KGALLTNPYDPVRMDETIYVALAMPKA--EQQARMREMFDAVNYYDVQRWADEFLAAV 480 (487)
T ss_pred hhc---CCCEEECCCCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 888 358999999999999999999999874 24444556666676666655555554433
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-12 Score=143.84 Aligned_cols=267 Identities=11% Similarity=0.053 Sum_probs=176.3
Q ss_pred CCCcEEEEEcCCcccccc----h---------hhhhhhHHhHHHHHHHHhccccEEEecCCChh-hhhcCCCCCCEEEeC
Q 001292 315 HSIPLVWIIQEDSLANRL----P---------VYVERGFQNLLSYWKSVFSRVNVIVFPDYTLP-MLYSVLDAGNFFVIP 380 (1106)
Q Consensus 315 ~gIPVI~tIHna~Ls~r~----~---------~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~-~~~~gi~~~KI~VIp 380 (1106)
.++||+.-+|--.++... . +-....+..+...|..+=..||.+.+.+.-.. -+..-....+..+++
T Consensus 171 ~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~~~~~iVy 250 (465)
T KOG1387|consen 171 RRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQSNTCSIVY 250 (465)
T ss_pred ccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhccceeEEc
Confidence 678999888883322111 0 10111112233333344467777777653221 122223334556665
Q ss_pred CCCCCcccccccCcchhHHHHHHHcCC-CCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEE
Q 001292 381 GSPADVWAVEAYSKSHEKYQLRKENGF-LKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFL 459 (1106)
Q Consensus 381 N~GVDl~~~e~F~ps~s~~~LR~~lGL-~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLII 459 (1106)
. |.++ + .+....+- ..+.+.++++|.+.+ +|++. +|+.++......+.. ...++++ |++
T Consensus 251 P-PC~~---e---------~lks~~~te~~r~~~ll~l~Q~RP----EKnH~-~Lql~Al~~~~~pl~-a~~~~iK-L~i 310 (465)
T KOG1387|consen 251 P-PCST---E---------DLKSKFGTEGERENQLLSLAQFRP----EKNHK-ILQLFALYLKNEPLE-ASVSPIK-LII 310 (465)
T ss_pred C-CCCH---H---------HHHHHhcccCCcceEEEEEeecCc----ccccH-HHHHHHHHHhcCchh-hccCCce-EEE
Confidence 3 4554 1 33333333 346789999998888 88998 555443333221111 2346777 788
Q ss_pred EcCC----CCccHHHHHHHHHHcCCCCCcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecC
Q 001292 460 CGNS----TDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 533 (1106)
Q Consensus 460 VG~G----perY~eeLkeLaeklGL~d~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD 533 (1106)
+|.. ++.+...++.+++++.++. +|.|.- +-+++..+|+.|.+.|.+-.-| .||+.++|+||+|+-+|+.|
T Consensus 311 vGScRneeD~ervk~Lkd~a~~L~i~~-~v~F~~N~Py~~lv~lL~~a~iGvh~MwNE--HFGIsVVEyMAAGlIpi~h~ 387 (465)
T KOG1387|consen 311 VGSCRNEEDEERVKSLKDLAEELKIPK-HVQFEKNVPYEKLVELLGKATIGVHTMWNE--HFGISVVEYMAAGLIPIVHN 387 (465)
T ss_pred EeccCChhhHHHHHHHHHHHHhcCCcc-ceEEEecCCHHHHHHHhccceeehhhhhhh--hcchhHHHHHhcCceEEEeC
Confidence 8862 2335677899999999998 898887 5589999999999999886554 99999999999999999999
Q ss_pred CCCch-hhhcc---CCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHH-HHHHHHHHHhcC
Q 001292 534 FPIIK-EYVAE---GAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVT-RYARILENVLNF 608 (1106)
Q Consensus 534 ~gGI~-EiV~D---g~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~-~Y~eLyeslLk~ 608 (1106)
.||.. ++|.+ ..+|++.+ +.+++|++|.+++..... .+..|.++||..+. .|++...+ .+...+.+++..
T Consensus 388 SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~~~--~r~~~r~~AR~s~~-RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 388 SGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLNYD--ERNMMRRNARKSLA-RFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred CCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHH-HhhHHHHHHhHhHHHHHhhcc
Confidence 99865 55543 34899884 788999999999876553 25777888887765 56665555 888888888765
Q ss_pred C
Q 001292 609 P 609 (1106)
Q Consensus 609 P 609 (1106)
|
T Consensus 463 ~ 463 (465)
T KOG1387|consen 463 E 463 (465)
T ss_pred c
Confidence 4
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.7e-14 Score=136.39 Aligned_cols=133 Identities=24% Similarity=0.336 Sum_probs=94.9
Q ss_pred cEEEEEEcccCccccccCCHHHHHH-HHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcC
Q 001292 411 EIVVVVVGSSFFYNELSWDYAVAMH-DVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 489 (1106)
Q Consensus 411 ~~VIL~VGRl~~y~kg~Kg~dlLLe-A~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG 489 (1106)
-++|+++|+... .|+.+.+++ ++.++.++. |+++ |+|+|.+++ +++++ ..+ +|++.|
T Consensus 2 ~~~i~~~g~~~~----~k~~~~li~~~~~~l~~~~-------p~~~-l~i~G~~~~----~l~~~-----~~~-~v~~~g 59 (135)
T PF13692_consen 2 ILYIGYLGRIRP----DKGLEELIEAALERLKEKH-------PDIE-LIIIGNGPD----ELKRL-----RRP-NVRFHG 59 (135)
T ss_dssp -EEEE--S-SSG----GGTHHHHHH-HHHHHHHHS-------TTEE-EEEECESS-----HHCCH-----HHC-TEEEE-
T ss_pred cccccccccccc----cccccchhhhHHHHHHHHC-------cCEE-EEEEeCCHH----HHHHh-----cCC-CEEEcC
Confidence 468889997766 889999999 998777543 7888 678888774 34444 123 799999
Q ss_pred ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhC
Q 001292 490 FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 568 (1106)
Q Consensus 490 ~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsD 568 (1106)
..+++..+|+.||++++|+... +++|.+++|||++|+|||+++. +..+++.....|.++ .+|+++++++|.++++|
T Consensus 60 ~~~e~~~~l~~~dv~l~p~~~~-~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 60 FVEELPEILAAADVGLIPSRFN-EGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLLND 135 (135)
T ss_dssp S-HHHHHHHHC-SEEEE-BSS--SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHhCCEEEEEeeCC-CcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHhcC
Confidence 8889999999999999998753 4999999999999999999998 566677655677777 78999999999999876
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.5e-11 Score=140.88 Aligned_cols=298 Identities=13% Similarity=0.074 Sum_probs=175.2
Q ss_pred CCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCc-------------------hHHHH-------HHhHH
Q 001292 222 PPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS-------------------HSLWE-------QIAGQ 275 (1106)
Q Consensus 222 ~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~-------------------~~i~r-------~lg~l 275 (1106)
-|+|.++.|. .+|--... .++++|+++|.+|.++....... ....+ .+...
T Consensus 5 ~~ki~i~aGg--tsGhi~pa-al~~~l~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~v~G~~~~l~~~~~~~~~~~~~ 81 (385)
T TIGR00215 5 IPTIALVAGE--ASGDILGA-GLRQQLKEHYPNARFIGVAGPRMAAEGCEVLYSMEELSVMGLREVLGRLGRLLKIRKEV 81 (385)
T ss_pred CCeEEEEeCC--ccHHHHHH-HHHHHHHhcCCCcEEEEEccHHHHhCcCccccChHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 3567666544 23333444 99999999999998887653110 01111 12225
Q ss_pred HHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhcccc
Q 001292 276 ISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVN 355 (1106)
Q Consensus 276 vkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD 355 (1106)
.++++..+||++....+.+.-+. +..... ..++|+|+.+ .+ ..|...... .+. ..+.+|
T Consensus 82 ~~~l~~~kPd~vi~~g~~~~~~~-~a~aa~--------~~gip~v~~i--~P-~~waw~~~~---~r~------l~~~~d 140 (385)
T TIGR00215 82 VQLAKQAKPDLLVGIDAPDFNLT-KELKKK--------DPGIKIIYYI--SP-QVWAWRKWR---AKK------IEKATD 140 (385)
T ss_pred HHHHHhcCCCEEEEeCCCCccHH-HHHHHh--------hCCCCEEEEe--CC-cHhhcCcch---HHH------HHHHHh
Confidence 67788899999988776442222 211111 2689999663 21 111111000 122 224567
Q ss_pred EEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEc-ccCccccccCCHHHHH
Q 001292 356 VIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVG-SSFFYNELSWDYAVAM 434 (1106)
Q Consensus 356 ~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VG-Rl~~y~kg~Kg~dlLL 434 (1106)
.|++........+... ..+..+++|...|. .......+...|+.++++++.++|+++| +... +..|....++
T Consensus 141 ~v~~~~~~e~~~~~~~-g~~~~~vGnPv~~~----~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~a--ei~k~~~~ll 213 (385)
T TIGR00215 141 FLLAILPFEKAFYQKK-NVPCRFVGHPLLDA----IPLYKPDRKSAREKLGIDHNGETLALLPGSRGS--EVEKLFPLFL 213 (385)
T ss_pred HhhccCCCcHHHHHhc-CCCEEEECCchhhh----ccccCCCHHHHHHHcCCCCCCCEEEEECCCCHH--HHHHhHHHHH
Confidence 7777766555443321 13566777732232 1111123455688899988888777654 3221 2245677788
Q ss_pred HHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCC
Q 001292 435 HDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQG 514 (1106)
Q Consensus 435 eA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEG 514 (1106)
+|+..+.+. .|++++++.++.+... +.++++.+.++... .|.+.+. ++..+|++||++|++|
T Consensus 214 ~a~~~l~~~-------~p~~~~vi~~~~~~~~--~~~~~~~~~~~~~~-~v~~~~~--~~~~~l~aADl~V~~S------ 275 (385)
T TIGR00215 214 KAAQLLEQQ-------EPDLRRVLPVVNFKRR--LQFEQIKAEYGPDL-QLHLIDG--DARKAMFAADAALLAS------ 275 (385)
T ss_pred HHHHHHHHh-------CCCeEEEEEeCCchhH--HHHHHHHHHhCCCC-cEEEECc--hHHHHHHhCCEEeecC------
Confidence 887666532 3777765555665543 67777777776654 6766643 5678999999999997
Q ss_pred CcHHHHHHHHhCCCEEec-CCC----------------CchhhhccCCeEE-EE-cCCCHHHHHHHHHHHHhCc
Q 001292 515 FPSLIVRAMTFGIPVITP-DFP----------------IIKEYVAEGAQVI-FF-QKDNPEGLSRAFSLFISNG 569 (1106)
Q Consensus 515 FGlvLLEAMA~G~PVIAS-D~g----------------GI~EiV~Dg~nG~-LV-~~~D~eeLAeAI~~LLsDp 569 (1106)
|.+.+|+|++|+|+|.. .+. +++.++.+..... +. ..-+++.|++.+.++++|+
T Consensus 276 -Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 276 -GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred -CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 56677999999999887 111 2223332222111 11 2236899999999999999
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.8e-10 Score=126.85 Aligned_cols=168 Identities=16% Similarity=0.217 Sum_probs=126.7
Q ss_pred CcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcC
Q 001292 410 DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 489 (1106)
Q Consensus 410 d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG 489 (1106)
+.+.++..+..... ..++.++++|+...-++.......-|.+ +.||.|.||.+ +.+.+.++++.+.. |.+.-
T Consensus 253 ~~pallvsSTswTp---DEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciITGKGPlk--E~Y~~~I~~~~~~~--v~~~t 324 (444)
T KOG2941|consen 253 ERPALLVSSTSWTP---DEDFGILLEALVIYEEQLYDKTHNLPSL-LCIITGKGPLK--EKYSQEIHEKNLQH--VQVCT 324 (444)
T ss_pred CCCeEEEecCCCCC---cccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEcCCCchh--HHHHHHHHHhcccc--eeeee
Confidence 34445544444432 4489999999976544444444445877 47889999987 88999999999985 44443
Q ss_pred ---ChhhHHHHHHHcCeEEE--ccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHH
Q 001292 490 ---FNGDVNGVLLMADIVLY--GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSL 564 (1106)
Q Consensus 490 ---~~eDL~~LyaaADVfV~--PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~ 564 (1106)
..+|.+.+++.||+.|+ +|++ |=..|++++.-..||+||+|-++..+.|+|+|++||+++. |.++|++.+.-
T Consensus 325 pWL~aEDYP~ll~saDlGVcLHtSSS-GLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~ 401 (444)
T KOG2941|consen 325 PWLEAEDYPKLLASADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE--DSEELAEQLQM 401 (444)
T ss_pred cccccccchhHhhccccceEeeecCc-ccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--cHHHHHHHHHH
Confidence 66899999999998774 4444 2357999999999999999999999999999999999994 89999999999
Q ss_pred HHh----CcccHHHHHHHHHHHHHHHHHhcHH
Q 001292 565 FIS----NGKLSKFARTVASAGRLHAKNMLAL 592 (1106)
Q Consensus 565 LLs----DpelRk~r~~mGe~Are~ake~fse 592 (1106)
+++ +... ..++-.+.++. ++.-|+
T Consensus 402 lf~~fp~~a~~---l~~lkkn~~e~-~e~RW~ 429 (444)
T KOG2941|consen 402 LFKNFPDNADE---LNQLKKNLREE-QELRWD 429 (444)
T ss_pred HHhcCCCCHHH---HHHHHHhhHHH-HhhhHH
Confidence 998 4443 55666666665 334443
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.1e-11 Score=153.36 Aligned_cols=285 Identities=10% Similarity=0.108 Sum_probs=186.5
Q ss_pred cEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCCh
Q 001292 285 SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTL 364 (1106)
Q Consensus 285 DiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~ 364 (1106)
|+|-+|.|...++..+..+.. ...++-+..|-- +...-.+...+.-+. ....+-.+|.|-|++...
T Consensus 233 D~VWVHDYHL~LlP~~LR~~~---------p~~~IGfFlHiP-FPs~Eifr~LP~r~e----lL~glL~aDlIGFqT~~y 298 (934)
T PLN03064 233 DVVWCHDYHLMFLPKCLKEYN---------SNMKVGWFLHTP-FPSSEIHRTLPSRSE----LLRSVLAADLVGFHTYDY 298 (934)
T ss_pred CEEEEecchhhHHHHHHHHhC---------CCCcEEEEecCC-CCChHHHhhCCcHHH----HHHHHhcCCeEEeCCHHH
Confidence 577779999888887776543 456777777762 110000101100111 223355899999988655
Q ss_pred hhh-------hcCCC--------CCC---EEEeCCCCCCcccccccCcc-------hhHHHHHHHcCCCCCcEEEEEEcc
Q 001292 365 PML-------YSVLD--------AGN---FFVIPGSPADVWAVEAYSKS-------HEKYQLRKENGFLKDEIVVVVVGS 419 (1106)
Q Consensus 365 ~~~-------~~gi~--------~~K---I~VIpN~GVDl~~~e~F~ps-------~s~~~LR~~lGL~~d~~VIL~VGR 419 (1106)
... ..+.. ..+ +.+.| +|||. +.|... .....+++.++ ++.+|+.|+|
T Consensus 299 ~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~P-iGID~---~~f~~~~~~~~v~~~~~~lr~~~~---g~kiIlgVDR 371 (934)
T PLN03064 299 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFP-IGIDS---DRFIRALETPQVQQHIKELKERFA---GRKVMLGVDR 371 (934)
T ss_pred HHHHHHHHHHHhCccccCCeEEECCEEEEEEEEe-CEEcH---HHHHHHhcChhHHHHHHHHHHHhC---CceEEEEeec
Confidence 433 11211 112 23335 68887 455432 12345677665 5679999999
Q ss_pred cCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEE-----cCCCCc--cHHHHHHHHHHcC----CCC-CcEEE
Q 001292 420 SFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLC-----GNSTDG--YNDALQEVASRLG----LLE-HSVRH 487 (1106)
Q Consensus 420 l~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIV-----G~Gper--Y~eeLkeLaeklG----L~d-~rV~f 487 (1106)
+.. .||+...++|+..+++++++.. .++. |+.+ +++++. +..++.+++.+.+ -.+ .-|++
T Consensus 372 LD~----~KGI~~kL~AfE~fL~~~Pe~r---~kVV-LvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~ 443 (934)
T PLN03064 372 LDM----IKGIPQKILAFEKFLEENPEWR---DKVV-LLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHH 443 (934)
T ss_pred ccc----ccCHHHHHHHHHHHHHhCcccc---CCEE-EEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEE
Confidence 998 8999999999999887653221 1222 2222 223331 1223444444332 111 11555
Q ss_pred cC---ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCC----CEEecCCCCchhhhccCCeEEEEcCCCHHHHHH
Q 001292 488 YG---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI----PVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSR 560 (1106)
Q Consensus 488 lG---~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~----PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAe 560 (1106)
+. +.+++..+|+.|||++++|..| |++++++|+|||+. ++|.|.+.|..+.+ +..+++++|.|++++|+
T Consensus 444 ~~~~l~~eeL~AlY~~ADV~lvTslrD--GmNLva~Eyva~~~~~~GvLILSEfaGaa~~L--~~~AllVNP~D~~~vA~ 519 (934)
T PLN03064 444 LDRSLDFHALCALYAVTDVALVTSLRD--GMNLVSYEFVACQDSKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVAA 519 (934)
T ss_pred eccCCCHHHHHHHHHhCCEEEeCcccc--ccCchHHHHHHhhcCCCCCeEEeCCCchHHHh--CCceEEECCCCHHHHHH
Confidence 44 4588999999999999999997 99999999999954 44559999999989 55789999999999999
Q ss_pred HHHHHHh-CcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 001292 561 AFSLFIS-NGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENV 605 (1106)
Q Consensus 561 AI~~LLs-DpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyesl 605 (1106)
+|.++++ +++. ++...+++++.+..+.+...+..+..-++..
T Consensus 520 AI~~AL~M~~~E---r~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~ 562 (934)
T PLN03064 520 SIAQALNMPEEE---REKRHRHNFMHVTTHTAQEWAETFVSELNDT 562 (934)
T ss_pred HHHHHHhCCHHH---HHHHHHHHHhhcccCCHHHHHHHHHHHHHHH
Confidence 9999999 4444 5777889999999888888787776666554
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.35 E-value=1e-11 Score=149.24 Aligned_cols=165 Identities=12% Similarity=0.152 Sum_probs=142.4
Q ss_pred EEEEEc--ccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCC-ccHHHHHHHHHHcCCC--------
Q 001292 413 VVVVVG--SSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD-GYNDALQEVASRLGLL-------- 481 (1106)
Q Consensus 413 VIL~VG--Rl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gpe-rY~eeLkeLaeklGL~-------- 481 (1106)
.+++++ |+ + .|..+.+++|+.++..++ |+++ |.+.|.+.+ .+.+.++++++++++.
T Consensus 321 ~~I~v~idrL-~----ek~~~~~I~av~~~~~~~-------p~~~-L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 321 TEIGFWIDGL-S----DEELQQILQQLLQYILKN-------PDYE-LKILTYNNDNDITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred eEEEEEcCCC-C----hHHHHHHHHHHHHHHhhC-------CCeE-EEEEEecCchhHHHHHHHHHHHHHhhhchhhhcc
Confidence 567777 88 7 889999999998887544 8988 688898763 3467788888888776
Q ss_pred ---------------------CCcEEEcCChh--hHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCch
Q 001292 482 ---------------------EHSVRHYGFNG--DVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK 538 (1106)
Q Consensus 482 ---------------------d~rV~flG~~e--DL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~ 538 (1106)
+ +|.|.|... ++.+.|..+.++|.+|..| +|+ +++||++.|+|+| .-|..
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~-~v~f~gy~~e~dl~~~~~~arl~id~s~~e--g~~-~~ieAiS~GiPqI---nyg~~ 460 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKE-RIAFTTLTNEEDLISALDKLRLIIDLSKEP--DLY-TQISGISAGIPQI---NKVET 460 (519)
T ss_pred ccchhhhhhhcccchhhccccc-EEEEEecCCHHHHHHHHhhheEEEECCCCC--ChH-HHHHHHHcCCCee---ecCCc
Confidence 5 899999776 9999999999999999986 999 9999999999999 44569
Q ss_pred hhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 001292 539 EYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 602 (1106)
Q Consensus 539 EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLy 602 (1106)
++|.|++||+|+ +|..+|+++|..+|.+++. ..++...+.+.++++...+++.++.+++
T Consensus 461 ~~V~d~~NG~li--~d~~~l~~al~~~L~~~~~---wn~~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 461 DYVEHNKNGYII--DDISELLKALDYYLDNLKN---WNYSLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred eeeEcCCCcEEe--CCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 999999999999 7999999999999999987 4888999999998888888888887753
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.4e-08 Score=117.07 Aligned_cols=299 Identities=17% Similarity=0.224 Sum_probs=182.6
Q ss_pred CChhHHHHHHHHHHHHHCCCE-EEEEEcCCCC-------------------------c---hH---HHHHHhHHHHHhhc
Q 001292 234 KDSRSLLLITVVKNLQKLGYV-FKIYAVRSGN-------------------------S---HS---LWEQIAGQISILGQ 281 (1106)
Q Consensus 234 ~gGesl~vv~LakaLqe~Gye-VtV~t~~dg~-------------------------~---~~---i~r~lg~lvkiIr~ 281 (1106)
.+|-.-.+..+++.|.++|++ |.++...++. . .. .+..+....++++.
T Consensus 10 TGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~a~~il~~ 89 (357)
T COG0707 10 TGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVKQYGIEFELIPSGGLRRKGSLKLLKAPFKLLKGVLQARKILKK 89 (357)
T ss_pred CccchhHHHHHHHHHHhhCccEEEEecccccceeeeccccCceEEEEecccccccCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356667788999999999994 6666432211 0 11 12222336778899
Q ss_pred cCccEEEE-ccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEec
Q 001292 282 EQYSLIDW-SIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFP 360 (1106)
Q Consensus 282 ~~pDiIh~-~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~ 360 (1106)
.+||++-. ..|.+.... ++.+ ..++|++.+-.|..... . .++.+ +.++.|...
T Consensus 90 ~kPd~vig~Ggyvs~P~~-~Aa~----------~~~iPv~ihEqn~~~G~------a---nk~~~------~~a~~V~~~ 143 (357)
T COG0707 90 LKPDVVIGTGGYVSGPVG-IAAK----------LLGIPVIIHEQNAVPGL------A---NKILS------KFAKKVASA 143 (357)
T ss_pred cCCCEEEecCCccccHHH-HHHH----------hCCCCEEEEecCCCcch------h---HHHhH------Hhhceeeec
Confidence 99997766 444443333 3332 26799998766642110 0 12222 234444433
Q ss_pred CCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHh
Q 001292 361 DYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPL 440 (1106)
Q Consensus 361 S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~L 440 (1106)
... ...+.+.+++.++.+ ++.. .|... .....+..... ++++|+++|. .-|...+-+++..+
T Consensus 144 f~~---~~~~~~~~~~~~tG~-Pvr~----~~~~~-~~~~~~~~~~~--~~~~ilV~GG-------S~Ga~~ln~~v~~~ 205 (357)
T COG0707 144 FPK---LEAGVKPENVVVTGI-PVRP----EFEEL-PAAEVRKDGRL--DKKTILVTGG-------SQGAKALNDLVPEA 205 (357)
T ss_pred ccc---ccccCCCCceEEecC-cccH----Hhhcc-chhhhhhhccC--CCcEEEEECC-------cchhHHHHHHHHHH
Confidence 322 123455567778776 6764 33321 12222222222 6777887774 22444444444444
Q ss_pred HHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHH
Q 001292 441 LIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIV 520 (1106)
Q Consensus 441 l~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLL 520 (1106)
.... . .+++++.++|... . +.++..-.+++. +.+.++.++|..+|++||++|.= ..++++-
T Consensus 206 ~~~l----~--~~~~v~~~~G~~~-~--~~~~~~~~~~~~----~~v~~f~~dm~~~~~~ADLvIsR------aGa~Ti~ 266 (357)
T COG0707 206 LAKL----A--NRIQVIHQTGKND-L--EELKSAYNELGV----VRVLPFIDDMAALLAAADLVISR------AGALTIA 266 (357)
T ss_pred HHHh----h--hCeEEEEEcCcch-H--HHHHHHHhhcCc----EEEeeHHhhHHHHHHhccEEEeC------CcccHHH
Confidence 3322 1 1456667777765 2 445444443332 88889999999999999999954 5579999
Q ss_pred HHHHhCCCEEecCCCC--------chhhhccCCeEEEEcCCC--HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhc
Q 001292 521 RAMTFGIPVITPDFPI--------IKEYVAEGAQVIFFQKDN--PEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNML 590 (1106)
Q Consensus 521 EAMA~G~PVIASD~gG--------I~EiV~Dg~nG~LV~~~D--~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~f 590 (1106)
|..++|+|+|.-..+. ....+.+...|.+++..+ ++.+++.|.+++++++. .++|++++++......
T Consensus 267 E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~---l~~m~~~a~~~~~p~a 343 (357)
T COG0707 267 ELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEK---LKAMAENAKKLGKPDA 343 (357)
T ss_pred HHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHH---HHHHHHHHHhcCCCCH
Confidence 9999999999875543 334565656777776544 88999999999999887 6889999888776655
Q ss_pred HHHHHHHH
Q 001292 591 ALDCVTRY 598 (1106)
Q Consensus 591 see~v~~Y 598 (1106)
..+.++..
T Consensus 344 a~~i~~~~ 351 (357)
T COG0707 344 AERIADLL 351 (357)
T ss_pred HHHHHHHH
Confidence 55544433
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-08 Score=117.54 Aligned_cols=275 Identities=12% Similarity=0.121 Sum_probs=164.8
Q ss_pred CCChhHHHHHHHHHHHHHCCCEEEEEEcCCCC-------------------chH--HHH----------HHhHHHHHhhc
Q 001292 233 AKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN-------------------SHS--LWE----------QIAGQISILGQ 281 (1106)
Q Consensus 233 ~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~-------------------~~~--i~r----------~lg~lvkiIr~ 281 (1106)
+.||--...+.+++.|++.||+|.+++...+. ... .++ ......++++.
T Consensus 10 GTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 89 (352)
T PRK12446 10 GSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMKGVMDAYVRIRK 89 (352)
T ss_pred CcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44666778899999999999999998753321 000 111 11114567888
Q ss_pred cCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhH-HhHHHHHHHHhccccEEEec
Q 001292 282 EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGF-QNLLSYWKSVFSRVNVIVFP 360 (1106)
Q Consensus 282 ~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gl-eklis~~~~~l~~AD~VIa~ 360 (1106)
.+||+|+.+.....+-..++.+. .++|++++-.+.. + +. .++. ...++.++..
T Consensus 90 ~kPdvvi~~Ggy~s~p~~~aa~~----------~~~p~~i~e~n~~--------~--g~~nr~~------~~~a~~v~~~ 143 (352)
T PRK12446 90 LKPDVIFSKGGFVSVPVVIGGWL----------NRVPVLLHESDMT--------P--GLANKIA------LRFASKIFVT 143 (352)
T ss_pred cCCCEEEecCchhhHHHHHHHHH----------cCCCEEEECCCCC--------c--cHHHHHH------HHhhCEEEEE
Confidence 99999998764443434455543 6799987644321 0 11 2222 2345555432
Q ss_pred CCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHh
Q 001292 361 DYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPL 440 (1106)
Q Consensus 361 S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~L 440 (1106)
.... ...++.+++.++++ ++.. .|... .+...++.+++.+++++|+.+|... |...+-+++..+
T Consensus 144 -f~~~--~~~~~~~k~~~tG~-Pvr~----~~~~~-~~~~~~~~~~l~~~~~~iLv~GGS~-------Ga~~in~~~~~~ 207 (352)
T PRK12446 144 -FEEA--AKHLPKEKVIYTGS-PVRE----EVLKG-NREKGLAFLGFSRKKPVITIMGGSL-------GAKKINETVREA 207 (352)
T ss_pred -ccch--hhhCCCCCeEEECC-cCCc----ccccc-cchHHHHhcCCCCCCcEEEEECCcc-------chHHHHHHHHHH
Confidence 2211 23455567878776 6764 33221 2345567788888888888887422 233333333333
Q ss_pred HHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh-hhHHHHHHHcCeEEEccCCCCCCCcHHH
Q 001292 441 LIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN-GDVNGVLLMADIVLYGSSQVEQGFPSLI 519 (1106)
Q Consensus 441 l~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~-eDL~~LyaaADVfV~PS~~EeEGFGlvL 519 (1106)
+... . .++++++++|.... +... .. .. .+...++. +++..+|+.||++|.- +.+.++
T Consensus 208 l~~l---~---~~~~vv~~~G~~~~---~~~~---~~--~~--~~~~~~f~~~~m~~~~~~adlvIsr------~G~~t~ 265 (352)
T PRK12446 208 LPEL---L---LKYQIVHLCGKGNL---DDSL---QN--KE--GYRQFEYVHGELPDILAITDFVISR------AGSNAI 265 (352)
T ss_pred HHhh---c---cCcEEEEEeCCchH---HHHH---hh--cC--CcEEecchhhhHHHHHHhCCEEEEC------CChhHH
Confidence 3221 1 23566777886531 2221 11 12 34556877 6899999999998854 557999
Q ss_pred HHHHHhCCCEEecCCC---------CchhhhccCCeEEEEcC--CCHHHHHHHHHHHHhCccc
Q 001292 520 VRAMTFGIPVITPDFP---------IIKEYVAEGAQVIFFQK--DNPEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 520 LEAMA~G~PVIASD~g---------GI~EiV~Dg~nG~LV~~--~D~eeLAeAI~~LLsDpel 571 (1106)
.|++++|+|.|.-... ...+.+.+...+..+.. -+++.|+++|..+++|++.
T Consensus 266 ~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~ 328 (352)
T PRK12446 266 FEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEK 328 (352)
T ss_pred HHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHH
Confidence 9999999999987542 12345545445555533 2588999999999988765
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.2e-08 Score=119.94 Aligned_cols=302 Identities=14% Similarity=0.140 Sum_probs=157.0
Q ss_pred cEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcc-----------cccchhhhhhhH---HhHHHHH---
Q 001292 285 SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSL-----------ANRLPVYVERGF---QNLLSYW--- 347 (1106)
Q Consensus 285 DiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~L-----------s~r~~~Y~~~gl---eklis~~--- 347 (1106)
-+.|+|-++..+...+..+.. ..+..|+|.|.-.+ -+.+..|..... ..+..++
T Consensus 145 ViaHfHEWmaG~gll~lr~~~---------~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iE 215 (633)
T PF05693_consen 145 VIAHFHEWMAGVGLLYLRKRK---------PDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIE 215 (633)
T ss_dssp EEEEEESGGGTTHHHHHHHTT----------SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHH
T ss_pred EEEEechHhHhHHHHHHhccC---------CCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHH
Confidence 367999988776555555433 46788999998222 122222211111 1111111
Q ss_pred HHHhccccEEEecCCChhhh-hcCCCCCCEEEeCCCCCCcccccccCcchh--------HHH----HHHHc----CCCCC
Q 001292 348 KSVFSRVNVIVFPDYTLPML-YSVLDAGNFFVIPGSPADVWAVEAYSKSHE--------KYQ----LRKEN----GFLKD 410 (1106)
Q Consensus 348 ~~~l~~AD~VIa~S~~~~~~-~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s--------~~~----LR~~l----GL~~d 410 (1106)
+.+...||+..++|.-.... ..-+....=.|+|| |+|. +.|+..++ ++. ++..+ .+..+
T Consensus 216 raaA~~AdvFTTVSeITa~Ea~~LL~r~pDvV~pN-Gl~v---~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d 291 (633)
T PF05693_consen 216 RAAAHYADVFTTVSEITAKEAEHLLKRKPDVVTPN-GLNV---DKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLD 291 (633)
T ss_dssp HHHHHHSSEEEESSHHHHHHHHHHHSS--SEE-----B-G---GGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GG
T ss_pred HHHHHhcCeeeehhhhHHHHHHHHhCCCCCEEcCC-Cccc---cccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCcc
Confidence 23456889988888543333 11122222267787 8998 44444321 111 12222 23334
Q ss_pred -cEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCcc----------HHHHHHHHH---
Q 001292 411 -EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGY----------NDALQEVAS--- 476 (1106)
Q Consensus 411 -~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY----------~eeLkeLae--- 476 (1106)
..+|...||..+ .+||.+.+|+|+.+|.......... -.+..+||++.....+ ..+++.-+.
T Consensus 292 ~tl~~ftsGRYEf---~NKG~D~fieAL~rLn~~lk~~~~~-~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~ 367 (633)
T PF05693_consen 292 KTLYFFTSGRYEF---RNKGIDVFIEALARLNHRLKQAGSD-KTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQ 367 (633)
T ss_dssp GEEEEEEESSS-T---TTTTHHHHHHHHHHHHHHHHHTT-S--EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeeeceee---ecCCccHHHHHHHHHHHHHhhcCCC-CeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHH
Confidence 445555676443 4899999999999987544222221 2222346666543322 111111111
Q ss_pred -H---------------------------------------------------------------cCC----CC-CcEEE
Q 001292 477 -R---------------------------------------------------------------LGL----LE-HSVRH 487 (1106)
Q Consensus 477 -k---------------------------------------------------------------lGL----~d-~rV~f 487 (1106)
+ +++ .+ .+|+|
T Consensus 368 ~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF 447 (633)
T PF05693_consen 368 EKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIF 447 (633)
T ss_dssp HHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE
T ss_pred HHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEE
Confidence 1 111 22 24566
Q ss_pred cC---------ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhcc-----CCeEEEE-cC
Q 001292 488 YG---------FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE-----GAQVIFF-QK 552 (1106)
Q Consensus 488 lG---------~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~D-----g~nG~LV-~~ 552 (1106)
.+ +.-+..+++..||+.|+||.+| ++|.+++|+.|+|+|.|+||..|..-.+.+ ...|+.+ +-
T Consensus 448 ~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYE--PWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR 525 (633)
T PF05693_consen 448 HPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYE--PWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDR 525 (633)
T ss_dssp --S---TTSSSS-S-HHHHHHHSSEEEE--SSB--SS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-S
T ss_pred eeccccCCCCCCCCCHHHHhccCceeeeccccc--cccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeC
Confidence 65 1235789999999999999998 999999999999999999999987644432 3356654 22
Q ss_pred --CCHHHHHHHHH----HHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 001292 553 --DNPEGLSRAFS----LFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 553 --~D~eeLAeAI~----~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk 607 (1106)
.+.++.+++|. .+..-... .+..+.+++.+.++...|.+....|.+.|...+.
T Consensus 526 ~~~n~~e~v~~la~~l~~f~~~~~r--qri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL~ 584 (633)
T PF05693_consen 526 RDKNYDESVNQLADFLYKFCQLSRR--QRIIQRNRAERLSDLADWKNFGKYYEKAYDLALR 584 (633)
T ss_dssp SSS-HHHHHHHHHHHHHHHHT--HH--HHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 34555555544 44443332 2556677888888888898888888888876665
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.01 E-value=5e-08 Score=119.41 Aligned_cols=184 Identities=10% Similarity=0.006 Sum_probs=134.2
Q ss_pred CCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCc------cHHHHHHHHHHcCC
Q 001292 407 FLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG------YNDALQEVASRLGL 480 (1106)
Q Consensus 407 L~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gper------Y~eeLkeLaeklGL 480 (1106)
+.++.+++++++|+.. .|+.++++.++..+..-. .+...+++ +|++|.+... +...+.+++++..+
T Consensus 385 ~dpd~~~ig~v~Rl~~----yKr~dLil~~i~~l~~i~---~~~~~pvq-~V~~Gka~p~d~~gk~~i~~i~~la~~~~~ 456 (601)
T TIGR02094 385 LDPDVLTIGFARRFAT----YKRADLIFRDLERLARIL---NNPERPVQ-IVFAGKAHPADGEGKEIIQRIVEFSKRPEF 456 (601)
T ss_pred cCCCCcEEEEEEcchh----hhhHHHHHHHHHHHHHHh---hCCCCCeE-EEEEEecCcccchHHHHHHHHHHHHhcccC
Confidence 4578889999999998 889999999987776311 11113566 6889987644 56777777775456
Q ss_pred CCCcEEEc-CChhh-HHHHHHHcCeEEE-ccC-CCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcC----
Q 001292 481 LEHSVRHY-GFNGD-VNGVLLMADIVLY-GSS-QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQK---- 552 (1106)
Q Consensus 481 ~d~rV~fl-G~~eD-L~~LyaaADVfV~-PS~-~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~---- 552 (1106)
++ +|.|+ ++... ...+++.||++++ ||. +| ..|++-+-||..|.+.+++--|...|.. ++.||+.+..
T Consensus 457 ~~-kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~E--acGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 457 RG-RIVFLENYDINLARYLVSGVDVWLNNPRRPLE--ASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEY 532 (601)
T ss_pred CC-CEEEEcCCCHHHHHHHhhhheeEEeCCCCCcC--CchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccc
Confidence 65 67765 55544 5689999999999 988 86 9999999999999999999877777766 5679999983
Q ss_pred --------CCHHHHHHHHHHHH-----hCccc--HHHHHHHHHHHHHHH-HHhcHHHHHHHHHHHH
Q 001292 553 --------DNPEGLSRAFSLFI-----SNGKL--SKFARTVASAGRLHA-KNMLALDCVTRYARIL 602 (1106)
Q Consensus 553 --------~D~eeLAeAI~~LL-----sDpel--Rk~r~~mGe~Are~a-ke~fsee~v~~Y~eLy 602 (1106)
.|+++|.++|.+.+ ++++. .+.-.+|.+++.... ..+.|..++..|.++|
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 78899999886654 33221 001245555555543 3456677778999887
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.5e-09 Score=96.68 Aligned_cols=89 Identities=26% Similarity=0.363 Sum_probs=77.8
Q ss_pred eEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHH
Q 001292 503 IVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAG 582 (1106)
Q Consensus 503 VfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~A 582 (1106)
+++.|+... +++..++|+||||+|||+.+.+++.+++.++.++++++ |+++++++|..+++||+. +++++++|
T Consensus 1 i~Ln~~~~~--~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~---~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSD--GPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEE---RRRIAKNA 73 (92)
T ss_pred CEeeCCCCC--CCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHH---HHHHHHHH
Confidence 456777765 99999999999999999999999999999998998886 999999999999999998 69999999
Q ss_pred HHHHHHhcH-HHHHHHH
Q 001292 583 RLHAKNMLA-LDCVTRY 598 (1106)
Q Consensus 583 re~ake~fs-ee~v~~Y 598 (1106)
++.++++++ ...++++
T Consensus 74 ~~~v~~~~t~~~~~~~i 90 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQI 90 (92)
T ss_pred HHHHHHhCCHHHHHHHH
Confidence 999997665 4444454
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.3e-07 Score=107.17 Aligned_cols=287 Identities=10% Similarity=0.045 Sum_probs=186.8
Q ss_pred cEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCC-cccccchhhhhhhHHhHHHHHHHHhccccEEEecCCC
Q 001292 285 SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQED-SLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYT 363 (1106)
Q Consensus 285 DiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna-~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~ 363 (1106)
|+|-+|.|...++.....+.. ...++-+..|-- +..+-+...|. -+. ....+-.+|.|-+++..
T Consensus 125 D~VWVHDYhL~llp~~LR~~~---------~~~~IgFFlHiPFPs~eifr~LP~--r~e----il~glL~aDlIGFqt~~ 189 (474)
T PRK10117 125 DIIWIHDYHLLPFASELRKRG---------VNNRIGFFLHIPFPTPEIFNALPP--HDE----LLEQLCDYDLLGFQTEN 189 (474)
T ss_pred CEEEEeccHhhHHHHHHHHhC---------CCCcEEEEEeCCCCChHHHhhCCC--hHH----HHHHHHhCccceeCCHH
Confidence 577779999888887776543 455677776762 11110000010 011 12334578888888755
Q ss_pred hhhh-------hcCCCC---------CC---EEEeCCCCCCcccccccCcc------hhHHHHHHHcCCCCCcEEEEEEc
Q 001292 364 LPML-------YSVLDA---------GN---FFVIPGSPADVWAVEAYSKS------HEKYQLRKENGFLKDEIVVVVVG 418 (1106)
Q Consensus 364 ~~~~-------~~gi~~---------~K---I~VIpN~GVDl~~~e~F~ps------~s~~~LR~~lGL~~d~~VIL~VG 418 (1106)
.... ..+... ++ +.+.| +|||. +.|... .....+++.++ ++.+|+.+.
T Consensus 190 y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~P-igID~---~~~~~~a~~~~~~~~~~lr~~~~---~~~lilgVD 262 (474)
T PRK10117 190 DRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYP-IGIEP---DEIAKQAAGPLPPKLAQLKAELK---NVQNIFSVE 262 (474)
T ss_pred HHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEE-CeEcH---HHHHHHhhchHHHHHHHHHHHcC---CCeEEEEec
Confidence 4432 111110 11 22334 67887 343221 12245566654 567999999
Q ss_pred ccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCC----CC--ccHHHHHHHHHHcCC----CC-CcEEE
Q 001292 419 SSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNS----TD--GYNDALQEVASRLGL----LE-HSVRH 487 (1106)
Q Consensus 419 Rl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~G----pe--rY~eeLkeLaeklGL----~d-~rV~f 487 (1106)
|+.. .||...-+.|+..+++.+++.. .++.|+-|+... ++ .+..++++++.+.+- .+ .-|++
T Consensus 263 RLDy----tKGi~~rl~Afe~fL~~~Pe~~---gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y 335 (474)
T PRK10117 263 RLDY----SKGLPERFLAYEALLEKYPQHH---GKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYY 335 (474)
T ss_pred cccc----ccCHHHHHHHHHHHHHhChhhc---CCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEE
Confidence 9998 8899999999999998876554 345543333221 11 123455555554322 11 12555
Q ss_pred cC---ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCC-----CEEecCCCCchhhhccCCeEEEEcCCCHHHHH
Q 001292 488 YG---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI-----PVITPDFPIIKEYVAEGAQVIFFQKDNPEGLS 559 (1106)
Q Consensus 488 lG---~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~-----PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLA 559 (1106)
+. +.+++..+|..|||+++++..+ |.-++..|+.||.. ++|.|.+.|..+.+. ..++++|.|++++|
T Consensus 336 ~~~~~~~~~l~alyr~ADv~lVTplRD--GMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~---~AllVNP~d~~~~A 410 (474)
T PRK10117 336 LNQHFDRKLLMKIFRYSDVGLVTPLRD--GMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVA 410 (474)
T ss_pred ecCCCCHHHHHHHHHhccEEEeccccc--ccccccchheeeecCCCCccEEEecccchHHHhC---CCeEECCCCHHHHH
Confidence 44 4578999999999999999997 99999999999976 388999999999993 47899999999999
Q ss_pred HHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 001292 560 RAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 560 eAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk 607 (1106)
++|.+.++-|.. ++++--+..++.+..+.....+..+..-+..+..
T Consensus 411 ~Ai~~AL~Mp~~--Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~ 456 (474)
T PRK10117 411 AALDRALTMPLA--ERISRHAEMLDVIVKNDINHWQECFISDLKQIVP 456 (474)
T ss_pred HHHHHHHcCCHH--HHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Confidence 999999998874 3455556667778777777777777776666543
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.83 E-value=5.2e-07 Score=107.82 Aligned_cols=291 Identities=12% Similarity=0.090 Sum_probs=162.5
Q ss_pred HhhccCc-cEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccE
Q 001292 278 ILGQEQY-SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNV 356 (1106)
Q Consensus 278 iIr~~~p-DiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~ 356 (1106)
++...++ |+|-+|.|...++..+..+.. ...++.+..|-- +...-.+...+..+. ....+-.||.
T Consensus 135 i~~~~~~~D~VWVhDYhL~llP~~LR~~~---------~~~~IgfFlHiP-FPs~e~fr~lP~r~e----iL~glL~aDl 200 (474)
T PF00982_consen 135 IAEVYRPGDLVWVHDYHLMLLPQMLRERG---------PDARIGFFLHIP-FPSSEIFRCLPWREE----ILRGLLGADL 200 (474)
T ss_dssp HGGG--TT-EEEEESGGGTTHHHHHHHTT-----------SEEEEEE-S-----HHHHTTSTTHHH----HHHHHTTSSE
T ss_pred HHHhCcCCCEEEEeCCcHHHHHHHHHhhc---------CCceEeeEEecC-CCCHHHHhhCCcHHH----HHHHhhcCCE
Confidence 3333344 477779999888888777543 457788777772 110000001100122 2233558999
Q ss_pred EEecCCChhhh-------hcCC--CC--------CC---EEEeCCCCCCcccccccCcc-------hhHHHHHHHcCCCC
Q 001292 357 IVFPDYTLPML-------YSVL--DA--------GN---FFVIPGSPADVWAVEAYSKS-------HEKYQLRKENGFLK 409 (1106)
Q Consensus 357 VIa~S~~~~~~-------~~gi--~~--------~K---I~VIpN~GVDl~~~e~F~ps-------~s~~~LR~~lGL~~ 409 (1106)
|-+++...... ..+. .. ++ +.+.| .|||. +.|... .....++++++ .
T Consensus 201 IgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~p-igId~---~~~~~~~~~~~v~~~~~~l~~~~~--~ 274 (474)
T PF00982_consen 201 IGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFP-IGIDP---DAFAQLARSPEVQERAEELREKFK--G 274 (474)
T ss_dssp EEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE-------H---HHHHHHHH-S---HHHHHHHHHTT--T
T ss_pred EEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEee-ccCCh---HHHHhhccChHHHHHHHHHHHhcC--C
Confidence 99988654433 1111 11 11 22334 68887 444321 12345666664 2
Q ss_pred CcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcC--CCC-----ccHHHHHHHHHH----c
Q 001292 410 DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN--STD-----GYNDALQEVASR----L 478 (1106)
Q Consensus 410 d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~--Gpe-----rY~eeLkeLaek----l 478 (1106)
+..+|+.+.|+.. .||...-+.|+.++++++++.. .++.| +-++. ... .+..++.+++.+ +
T Consensus 275 ~~~ii~gvDrld~----~kGi~~kl~Afe~fL~~~P~~~---~kv~l-iQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~ 346 (474)
T PF00982_consen 275 KRKIIVGVDRLDY----TKGIPEKLRAFERFLERYPEYR---GKVVL-IQIAVPSREDVPEYQELRREVEELVGRINGKY 346 (474)
T ss_dssp -SEEEEEE--B-G----GG-HHHHHHHHHHHHHH-GGGT---TTEEE-EEE--B-STTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeccchh----hcCHHHHHHHHHHHHHhCcCcc---CcEEE-EEEeeccCccchhHHHHHHHHHHHHHHHHhhc
Confidence 3579999999988 8999999999999999887654 35554 33332 111 123455555543 3
Q ss_pred CCCC-CcEEEc-C--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCC----EEecCCCCchhhhccCCeEEEE
Q 001292 479 GLLE-HSVRHY-G--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIP----VITPDFPIIKEYVAEGAQVIFF 550 (1106)
Q Consensus 479 GL~d-~rV~fl-G--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~P----VIASD~gGI~EiV~Dg~nG~LV 550 (1106)
|-.+ +-|.+. + +.+++..+|..||+++++|..+ |.-++..|+.||..+ +|.|.+.|..+.+.+ ..+++
T Consensus 347 g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrD--GmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~--~al~V 422 (474)
T PF00982_consen 347 GTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRD--GMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSE--AALLV 422 (474)
T ss_dssp -BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSB--S--HHHHHHHHHS-TS--EEEEETTBGGGGT-TT--S-EEE
T ss_pred ccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhh--ccCCcceEEEEEecCCCCceEeeccCCHHHHcCC--ccEEE
Confidence 3221 124444 4 5588999999999999999997 999999999999876 888999999999943 45899
Q ss_pred cCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 001292 551 QKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 602 (1106)
Q Consensus 551 ~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLy 602 (1106)
+|.|++++|++|...++-+.. +++..-+..++.+.++.....++.+.+-+
T Consensus 423 NP~d~~~~A~ai~~AL~M~~~--Er~~r~~~~~~~v~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 423 NPWDIEEVADAIHEALTMPPE--ERKERHARLREYVREHDVQWWAESFLRDL 472 (474)
T ss_dssp -TT-HHHHHHHHHHHHT--HH--HHHHHHHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHcCCHH--HHHHHHHHHHHHhHhCCHHHHHHHHHHHh
Confidence 999999999999999997763 34555556667777766666665554443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.5e-06 Score=100.70 Aligned_cols=296 Identities=15% Similarity=0.119 Sum_probs=165.0
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHC-CCEEEEEEcCCCC-------chHHH-------------------------
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKL-GYVFKIYAVRSGN-------SHSLW------------------------- 269 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~-GyeVtV~t~~dg~-------~~~i~------------------------- 269 (1106)
+||++|+|. -++-+-+.+++++|++. ++++.++.++... ...+.
T Consensus 1 ~ki~~v~Gt---Rpe~iklapv~~~l~~~~~~~~~lv~tGqH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (365)
T TIGR03568 1 KKICVVTGT---RADYGLLRPLLKALQDDPDLELQLIVTGMHLSPEYGNTVNEIEKDGFDIDEKIEILLDSDSNAGMAKS 77 (365)
T ss_pred CeEEEEEec---ChhHHHHHHHHHHHhcCCCCcEEEEEeCCCCChhhccHHHHHHHcCCCCCCccccccCCCCCCCHHHH
Confidence 356666654 34556677888888874 6776666543210 01110
Q ss_pred --HHHhHHHHHhhccCccEEEEcc-ccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHH
Q 001292 270 --EQIAGQISILGQEQYSLIDWSI-FDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSY 346 (1106)
Q Consensus 270 --r~lg~lvkiIr~~~pDiIh~~~-~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~ 346 (1106)
+.+..+.+++...+||++-.+. ....+...++... .+||++. +|+...+..... ....+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~----------~~IPv~H-veaG~rs~~~~e---E~~r~~i~- 142 (365)
T TIGR03568 78 MGLTIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAAL----------LNIPIAH-IHGGEVTEGAID---ESIRHAIT- 142 (365)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHH----------hCCcEEE-EECCccCCCCch---HHHHHHHH-
Confidence 1111255677778888776665 4444555555532 6899884 455422111111 00012222
Q ss_pred HHHHhccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCC-cEEEEEEcccCcc
Q 001292 347 WKSVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKD-EIVVVVVGSSFFY 423 (1106)
Q Consensus 347 ~~~~l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d-~~VIL~VGRl~~y 423 (1106)
+.++..++++...... ..+.++.++.+++|.++|... .+ .......+.+++|++++ .++++.+-+...
T Consensus 143 -----~la~l~f~~t~~~~~~L~~eg~~~~~i~~tG~~~iD~l~--~~-~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~- 213 (365)
T TIGR03568 143 -----KLSHLHFVATEEYRQRVIQMGEDPDRVFNVGSPGLDNIL--SL-DLLSKEELEEKLGIDLDKPYALVTFHPVTL- 213 (365)
T ss_pred -----HHHhhccCCCHHHHHHHHHcCCCCCcEEEECCcHHHHHH--hh-hccCHHHHHHHhCCCCCCCEEEEEeCCCcc-
Confidence 2345556666544443 457778899999998888521 11 11124566778888644 443343322210
Q ss_pred ccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCC-CCCcEEEcCC--hhhHHHHHHH
Q 001292 424 NELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGL-LEHSVRHYGF--NGDVNGVLLM 500 (1106)
Q Consensus 424 ~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL-~d~rV~flG~--~eDL~~Lyaa 500 (1106)
...+..+.+.+.++.|.+ . +.++ +++.+.+... ...+.+.+..+.- .+ +|.+.++ ..++..++..
T Consensus 214 -~~~~~~~~l~~li~~L~~----~---~~~~--~vi~P~~~p~-~~~i~~~i~~~~~~~~-~v~l~~~l~~~~~l~Ll~~ 281 (365)
T TIGR03568 214 -EKESAEEQIKELLKALDE----L---NKNY--IFTYPNADAG-SRIINEAIEEYVNEHP-NFRLFKSLGQERYLSLLKN 281 (365)
T ss_pred -cccCchHHHHHHHHHHHH----h---ccCC--EEEEeCCCCC-chHHHHHHHHHhcCCC-CEEEECCCChHHHHHHHHh
Confidence 011222333333333221 1 1233 3455554322 1333333333321 23 7999995 4789999999
Q ss_pred cCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHh
Q 001292 501 ADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 567 (1106)
Q Consensus 501 ADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLs 567 (1106)
||++|--|+ .|+ .||+++|+|||+ .++-+|.+..+.+.+++. .|++++.+++.++++
T Consensus 282 a~~vitdSS-----ggi--~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~vg-~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 282 ADAVIGNSS-----SGI--IEAPSFGVPTIN--IGTRQKGRLRADSVIDVD-PDKEEIVKAIEKLLD 338 (365)
T ss_pred CCEEEEcCh-----hHH--HhhhhcCCCEEe--ecCCchhhhhcCeEEEeC-CCHHHHHHHHHHHhC
Confidence 999995543 233 899999999994 566778887787887774 689999999999543
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.3e-07 Score=106.31 Aligned_cols=299 Identities=16% Similarity=0.120 Sum_probs=168.2
Q ss_pred CChhHHHHHHHHHHHHH--CCCEEE---EEEcCCC------------------Cc--h-------HHHH-HH---hHHHH
Q 001292 234 KDSRSLLLITVVKNLQK--LGYVFK---IYAVRSG------------------NS--H-------SLWE-QI---AGQIS 277 (1106)
Q Consensus 234 ~gGesl~vv~LakaLqe--~GyeVt---V~t~~dg------------------~~--~-------~i~r-~l---g~lvk 277 (1106)
..||.+..+.++++|++ .|++|. ++....+ +. . .+.+ .+ .....
T Consensus 6 ghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~e~~~ip~~g~~~~~~sgg~~~~~~~~~~~~~~~gl~~~~~~~~~ 85 (396)
T TIGR03492 6 GHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAYQNLGIPIIGPTKELPSGGFSYQSLRGLLRDLRAGLVGLTLGQWR 85 (396)
T ss_pred CchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHHhhCCCceeCCCCCCCCCCccCCCHHHHHHHHHhhHHHHHHHHHH
Confidence 35899999999999998 599999 5554221 10 0 1111 11 11345
Q ss_pred Hhhcc--CccEEEEc-cccHHHHHHHHHHHhhhhcccCCCCCCcEEE-EEcCCccc-------ccchhh-hhhhHH--hH
Q 001292 278 ILGQE--QYSLIDWS-IFDGIIADSLEAKEAISSLMQEPFHSIPLVW-IIQEDSLA-------NRLPVY-VERGFQ--NL 343 (1106)
Q Consensus 278 iIr~~--~pDiIh~~-~~~~i~v~~La~k~~idII~te~~~gIPVI~-tIHna~Ls-------~r~~~Y-~~~gle--kl 343 (1106)
+++.. ++++|-.. .+. ..+.++. .++|+++ ..|+.... .....| ...|.. -+
T Consensus 86 ~~~~~~~~p~~v~~~Gg~v----~~~aA~~----------~~~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~ 151 (396)
T TIGR03492 86 ALRKWAKKGDLIVAVGDIV----PLLFAWL----------SGKPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPW 151 (396)
T ss_pred HHHHHhhcCCEEEEECcHH----HHHHHHH----------cCCCceEEEeeccceeecCCCCCccchhhhccCCCccCHH
Confidence 66666 88866543 333 3233322 5778765 33553211 000001 001111 01
Q ss_pred HHHHHHHhccccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEE-cccCc
Q 001292 344 LSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVV-GSSFF 422 (1106)
Q Consensus 344 is~~~~~l~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~V-GRl~~ 422 (1106)
..++-.-+.|+.|++........+... ..++.+++|.-.|. +.... + . ++.++.++++.+ |+...
T Consensus 152 -e~n~l~~~~a~~v~~~~~~t~~~l~~~-g~k~~~vGnPv~d~-----l~~~~-~----~--~l~~~~~~lllLpGSR~a 217 (396)
T TIGR03492 152 -ERWLMRSRRCLAVFVRDRLTARDLRRQ-GVRASYLGNPMMDG-----LEPPE-R----K--PLLTGRFRIALLPGSRPP 217 (396)
T ss_pred -HHHHhhchhhCEEeCCCHHHHHHHHHC-CCeEEEeCcCHHhc-----Ccccc-c----c--ccCCCCCEEEEECCCCHH
Confidence 112222357777777765544443221 13788888843342 21111 1 1 455454555554 43322
Q ss_pred cccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCC-------------CcEEEcC
Q 001292 423 YNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLE-------------HSVRHYG 489 (1106)
Q Consensus 423 y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d-------------~rV~flG 489 (1106)
+..++...+++++..|.+ . +++.|++.+..... .+.+++..++.++.. ..+.+..
T Consensus 218 --e~~~~lp~~l~al~~L~~-------~-~~~~~v~~~~~~~~--~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~ 285 (396)
T TIGR03492 218 --EAYRNLKLLLRALEALPD-------S-QPFVFLAAIVPSLS--LEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLL 285 (396)
T ss_pred --HHHccHHHHHHHHHHHhh-------C-CCeEEEEEeCCCCC--HHHHHHHHHhcCceecCCccccchhhccCceEEEe
Confidence 334466788888866631 2 56776666634443 367777666556531 1366667
Q ss_pred ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCc---hhhhcc-----CCeEEEEcCCCHHHHHHH
Q 001292 490 FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPII---KEYVAE-----GAQVIFFQKDNPEGLSRA 561 (1106)
Q Consensus 490 ~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI---~EiV~D-----g~nG~LV~~~D~eeLAeA 561 (1106)
+..++..+|+.||++|..| |.+..|+|++|+|+|....++. ..++.. + .+..+...+++.++++
T Consensus 286 ~~~~~~~~l~~ADlvI~rS-------Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g-~~~~l~~~~~~~l~~~ 357 (396)
T TIGR03492 286 GRGAFAEILHWADLGIAMA-------GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLG-GSVFLASKNPEQAAQV 357 (396)
T ss_pred chHhHHHHHHhCCEEEECc-------CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcC-CEEecCCCCHHHHHHH
Confidence 7788999999999999875 3455999999999999864332 122222 2 3334444678999999
Q ss_pred HHHHHhCcccHHHHHHHHHHHH
Q 001292 562 FSLFISNGKLSKFARTVASAGR 583 (1106)
Q Consensus 562 I~~LLsDpelRk~r~~mGe~Ar 583 (1106)
|..+++|++. +.+|.++++
T Consensus 358 l~~ll~d~~~---~~~~~~~~~ 376 (396)
T TIGR03492 358 VRQLLADPEL---LERCRRNGQ 376 (396)
T ss_pred HHHHHcCHHH---HHHHHHHHH
Confidence 9999999886 455654333
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.2e-09 Score=115.32 Aligned_cols=164 Identities=15% Similarity=0.089 Sum_probs=92.5
Q ss_pred ccceeeeecccCCC---CCccccccCCCCCCCCCCEEEEEeCCCCCChhHHHHHHHHHHHHHC--CCEEEEEEcCCCCch
Q 001292 192 FGSRLKFVPDQVGF---GNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKL--GYVFKIYAVRSGNSH 266 (1106)
Q Consensus 192 ~ger~gf~~~~~~~---~~~~~ha~Sv~r~g~r~~RIalVlg~L~~gGesl~vv~LakaLqe~--GyeVtV~t~~dg~~~ 266 (1106)
|.||+|+...+... +.+|.||+|+ |+..++.+|+++|.++ |+.|.++++++++..
T Consensus 5 ~~eR~g~~~~~~~~~~~~~iWiHa~Sv--------------------GE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~ 64 (186)
T PF04413_consen 5 LKERLGFYPPPPPRKPGPLIWIHAASV--------------------GEVNAARPLIKRLRKQRPDLRILLTTTTPTGRE 64 (186)
T ss_dssp HHHHHS--GGGGGGT--T-EEEE-SSH--------------------HHHHHHHHHHHHHTT---TS-EEEEES-CCHHH
T ss_pred hHHhcCCCCCCCCCCCCCcEEEEECCH--------------------HHHHHHHHHHHHHHHhCCCCeEEEEecCCchHH
Confidence 79999998877643 7889999999 9999999999999998 999999999886655
Q ss_pred HHHHHHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCC---------CCCCcEEEEEcCCcccccchhhhh
Q 001292 267 SLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEP---------FHSIPLVWIIQEDSLANRLPVYVE 337 (1106)
Q Consensus 267 ~i~r~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~---------~~gIPVI~tIHna~Ls~r~~~Y~~ 337 (1106)
...+.+...+ ...|.++|.......++..+.++.++ ++++|. ..+||++.. |++++.++..
T Consensus 65 ~~~~~~~~~v----~~~~~P~D~~~~~~rfl~~~~P~~~i-~~EtElWPnll~~a~~~~ip~~Lv--Narls~~s~~--- 134 (186)
T PF04413_consen 65 MARKLLPDRV----DVQYLPLDFPWAVRRFLDHWRPDLLI-WVETELWPNLLREAKRRGIPVVLV--NARLSERSFR--- 134 (186)
T ss_dssp HHHGG-GGG-----SEEE---SSHHHHHHHHHHH--SEEE-EES----HHHHHH-----S-EEEE--EE-----------
T ss_pred HHHHhCCCCe----EEEEeCccCHHHHHHHHHHhCCCEEE-EEccccCHHHHHHHhhcCCCEEEE--eeeeccccch---
Confidence 5433322111 12344555555566677777776554 666665 578999988 8777766542
Q ss_pred hhHHhHHHHHHHHhccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCc
Q 001292 338 RGFQNLLSYWKSVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADV 386 (1106)
Q Consensus 338 ~gleklis~~~~~l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl 386 (1106)
+..++...++..++..|.|.+++..+.+. ..|.+++++.+++|.++|.
T Consensus 135 -~~~~~~~~~r~~l~~f~~i~aqs~~da~r~~~lG~~~~~v~v~GnlKfd~ 184 (186)
T PF04413_consen 135 -RYRRFPFLFRPLLSRFDRILAQSEADAERFRKLGAPPERVHVTGNLKFDQ 184 (186)
T ss_dssp -------HHHHHHGGG-SEEEESSHHHHHHHHTTT-S--SEEE---GGG--
T ss_pred -hhhhhHHHHHHHHHhCCEEEECCHHHHHHHHHcCCCcceEEEeCcchhcc
Confidence 11333344567889999999999888777 6688888999999987774
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.6e-07 Score=111.28 Aligned_cols=173 Identities=10% Similarity=0.140 Sum_probs=124.6
Q ss_pred ccccEEEecCCChhh-hhcCCC-CCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCC
Q 001292 352 SRVNVIVFPDYTLPM-LYSVLD-AGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD 429 (1106)
Q Consensus 352 ~~AD~VIa~S~~~~~-~~~gi~-~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg 429 (1106)
.+.|.||+++..... +...++ ..++.++|- |+=. .+.. . .....-+++++.
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~~~~~~~ip~-g~i~----~~~~---------~---~r~~~~~l~~t~---------- 290 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDNEYQEQISQL-GYLY----PFKK---------D---NKYRKQALILTN---------- 290 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCcccCceEEEE-EEEE----eecc---------c---cCCcccEEEECC----------
Confidence 677889988855333 333333 445666663 3321 0100 0 012224555541
Q ss_pred HHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChh-hHHHHHHHcCeEEEcc
Q 001292 430 YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNG-DVNGVLLMADIVLYGS 508 (1106)
Q Consensus 430 ~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~e-DL~~LyaaADVfV~PS 508 (1106)
...++++..|.+++ |+++| -| |-+.+. .+.+.++ +++ ++ .|.+.|... ++.++|..||+++-.|
T Consensus 291 -s~~I~~i~~Lv~~l-------Pd~~f-~I-ga~te~-s~kL~~L-~~y--~n-vvly~~~~~~~l~~ly~~~dlyLdin 355 (438)
T TIGR02919 291 -SDQIEHLEEIVQAL-------PDYHF-HI-AALTEM-SSKLMSL-DKY--DN-VKLYPNITTQKIQELYQTCDIYLDIN 355 (438)
T ss_pred -HHHHHHHHHHHHhC-------CCcEE-EE-EecCcc-cHHHHHH-Hhc--CC-cEEECCcChHHHHHHHHhccEEEEcc
Confidence 55788888887655 99984 55 776662 3788888 655 54 777888665 9999999999999999
Q ss_pred CCCCCCCcHHHHHHHHhCCCEEecCCC-CchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCccc
Q 001292 509 SQVEQGFPSLIVRAMTFGIPVITPDFP-IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 509 ~~EeEGFGlvLLEAMA~G~PVIASD~g-GI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpel 571 (1106)
..| +|+++++||++.|+|||+.+.. +..+++.+ |.+++.+++++|+++|..++++++.
T Consensus 356 ~~e--~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL~d~~~ 414 (438)
T TIGR02919 356 HGN--EILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLLNDPNQ 414 (438)
T ss_pred ccc--cHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHhcCHHH
Confidence 976 9999999999999999999765 45577744 8899999999999999999999976
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.9e-06 Score=102.43 Aligned_cols=330 Identities=14% Similarity=0.154 Sum_probs=183.2
Q ss_pred CCCCCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCc--hHHHH--------HHh-----HHHHHhhccC
Q 001292 219 GVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS--HSLWE--------QIA-----GQISILGQEQ 283 (1106)
Q Consensus 219 g~r~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~--~~i~r--------~lg-----~lvkiIr~~~ 283 (1106)
..++.||.+++++|....+.-+...+.+.+.+.-.+|-.+..++... .+.+- .++ ....-|+...
T Consensus 256 ~~~rlRvGylS~dlr~Havg~l~~~v~e~hDRdkfEvfay~~g~~~~dal~~rI~a~~~~~~~~~~~dd~e~a~~I~~d~ 335 (620)
T COG3914 256 NGKRLRVGYLSSDLRSHAVGFLLRWVFEYHDRDKFEVFAYSLGPPHTDALQERISAAVEKWYPIGRMDDAEIANAIRTDG 335 (620)
T ss_pred cccceeEEEeccccccchHHHHHHHHHHHhchhheEEEEEecCCCCchhHHHHHHHhhhheeccCCcCHHHHHHHHHhcC
Confidence 35678999999999999999999999999999889998887763211 11110 111 0233333334
Q ss_pred ccE-EEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCC
Q 001292 284 YSL-IDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDY 362 (1106)
Q Consensus 284 pDi-Ih~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~ 362 (1106)
.|+ |+........-..+.. .+-.||.++.-+..-. ......|++|...+
T Consensus 336 IdILvDl~g~T~d~r~~v~A-----------~RpAPiqvswlGy~aT-------------------~g~p~~DY~I~D~y 385 (620)
T COG3914 336 IDILVDLDGHTVDTRCQVFA-----------HRPAPIQVSWLGYPAT-------------------TGSPNMDYFISDPY 385 (620)
T ss_pred CeEEEeccCceeccchhhhh-----------cCCCceEEeecccccc-------------------cCCCcceEEeeCce
Confidence 442 3332221111111111 1334555553332110 01234555555433
Q ss_pred ChhhhhcCCCCCCEEEeCC--CCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHh
Q 001292 363 TLPMLYSVLDAGNFFVIPG--SPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPL 440 (1106)
Q Consensus 363 ~~~~~~~gi~~~KI~VIpN--~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~L 440 (1106)
..+........+++.-+|. .++| .+.+.... .-|.++|++++.+|++++++.+ |-...+++-..++
T Consensus 386 ~vPp~ae~yysEkl~RLp~cy~p~d-----~~~~v~p~-~sR~~lglp~~avVf~c~~n~~------K~~pev~~~wmqI 453 (620)
T COG3914 386 TVPPTAEEYYSEKLWRLPQCYQPVD-----GFEPVTPP-PSRAQLGLPEDAVVFCCFNNYF------KITPEVFALWMQI 453 (620)
T ss_pred ecCchHHHHHHHHHHhcccccCCCC-----CcccCCCC-cchhhcCCCCCeEEEEecCCcc------cCCHHHHHHHHHH
Confidence 3221100011122222221 1222 22221111 2367899999998888887543 3444556556566
Q ss_pred HHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCC--hhhHHHHHHHcCeEEEccCCCCCCCcHH
Q 001292 441 LIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF--NGDVNGVLLMADIVLYGSSQVEQGFPSL 518 (1106)
Q Consensus 441 l~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~--~eDL~~LyaaADVfV~PS~~EeEGFGlv 518 (1106)
+++. |+-.|++..|.......+.+++++++.|+...+.+|.++ .++..+.|..||+|+=+--+ +...+
T Consensus 454 L~~v-------P~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTyPY---~g~TT 523 (620)
T COG3914 454 LSAV-------PNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTYPY---GGHTT 523 (620)
T ss_pred HHhC-------CCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeecccC---CCccc
Confidence 5443 776655554432222467889999999998889999994 46788999999999955444 67789
Q ss_pred HHHHHHhCCCEEec-------CCCCchhhhcc-CCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH--
Q 001292 519 IVRAMTFGIPVITP-------DFPIIKEYVAE-GAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKN-- 588 (1106)
Q Consensus 519 LLEAMA~G~PVIAS-------D~gGI~EiV~D-g~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake-- 588 (1106)
.+||+-+|+|||+- .+++ .++.. |..-.++ .+.+++.+.-..+-.|..++ ++....-++..+.
T Consensus 524 a~daLwm~vPVlT~~G~~FasR~~~--si~~~agi~e~vA--~s~~dYV~~av~~g~dral~---q~~r~~l~~~r~tsp 596 (620)
T COG3914 524 ASDALWMGVPVLTRVGEQFASRNGA--SIATNAGIPELVA--DSRADYVEKAVAFGSDRALR---QQVRAELKRSRQTSP 596 (620)
T ss_pred hHHHHHhcCceeeeccHHHHHhhhH--HHHHhcCCchhhc--CCHHHHHHHHHHhcccHHHH---HhhHHHHHhccccCc
Confidence 99999999999974 1221 11111 2222223 46777877777777777653 3322221111111
Q ss_pred hcHHHHHH-HHHHHHHHHhc
Q 001292 589 MLALDCVT-RYARILENVLN 607 (1106)
Q Consensus 589 ~fsee~v~-~Y~eLyeslLk 607 (1106)
.|..+... .++.+|..+..
T Consensus 597 L~d~~~far~le~~y~~M~~ 616 (620)
T COG3914 597 LFDPKAFARKLETLYWGMWS 616 (620)
T ss_pred ccCHHHHHHHHHHHHHHHHH
Confidence 34444443 77777776643
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.4e-06 Score=92.11 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=70.1
Q ss_pred cEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCC
Q 001292 411 EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF 490 (1106)
Q Consensus 411 ~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~ 490 (1106)
..+++++|.... .+-...+++++..+. +++++.+++|.+... .++++++++.. . +|.+.++
T Consensus 171 ~~iLi~~GG~d~----~~~~~~~l~~l~~~~----------~~~~i~vv~G~~~~~-~~~l~~~~~~~---~-~i~~~~~ 231 (279)
T TIGR03590 171 RRVLVSFGGADP----DNLTLKLLSALAESQ----------INISITLVTGSSNPN-LDELKKFAKEY---P-NIILFID 231 (279)
T ss_pred CeEEEEeCCcCC----cCHHHHHHHHHhccc----------cCceEEEEECCCCcC-HHHHHHHHHhC---C-CEEEEeC
Confidence 446777775443 223345566664321 344556788886432 47888877642 2 7999999
Q ss_pred hhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCC
Q 001292 491 NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP 535 (1106)
Q Consensus 491 ~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~g 535 (1106)
.+++.++|+.||++|.++ |.++.|++++|+|+|+-...
T Consensus 232 ~~~m~~lm~~aDl~Is~~-------G~T~~E~~a~g~P~i~i~~~ 269 (279)
T TIGR03590 232 VENMAELMNEADLAIGAA-------GSTSWERCCLGLPSLAICLA 269 (279)
T ss_pred HHHHHHHHHHCCEEEECC-------chHHHHHHHcCCCEEEEEec
Confidence 999999999999999752 48999999999999987553
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=98.58 E-value=8e-06 Score=103.86 Aligned_cols=287 Identities=10% Similarity=0.044 Sum_probs=182.9
Q ss_pred cEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCCh
Q 001292 285 SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTL 364 (1106)
Q Consensus 285 DiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~ 364 (1106)
|+|-+|.|...++..+..+.. ...++-+..|-- +...-.+...+.-+. ....+-.||.|-+++...
T Consensus 203 d~VWVhDYhL~llP~~LR~~~---------~~~~IgfFlHiP-FPs~eifr~LP~r~e----iL~glL~aDlIGFht~~y 268 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRF---------NRVKLGFFLHSP-FPSSEIYKTLPIREE----LLRALLNSDLIGFHTFDY 268 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhC---------CCCcEEEEecCC-CCChHHHhhCCcHHH----HHHHHhcCCeEEecCHHH
Confidence 688889999888887776542 456777777762 111001101100111 223355899999988665
Q ss_pred hhh-------hcCCCC------------CC---EEEeCCCCCCcccccccCcc-------hhHHHHHHHcCCCCCcEEEE
Q 001292 365 PML-------YSVLDA------------GN---FFVIPGSPADVWAVEAYSKS-------HEKYQLRKENGFLKDEIVVV 415 (1106)
Q Consensus 365 ~~~-------~~gi~~------------~K---I~VIpN~GVDl~~~e~F~ps-------~s~~~LR~~lGL~~d~~VIL 415 (1106)
... ..++.. .+ +.+.| .|||. ..|... ....+++++++- +++.+|+
T Consensus 269 ar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~P-igId~---~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~il 343 (854)
T PLN02205 269 ARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILP-VGIHM---GQLQSVLSLPETEAKVKELIKQFCD-QDRIMLL 343 (854)
T ss_pred HHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEe-CeEcH---HHHHHHhcChhHHHHHHHHHHHhcc-CCCEEEE
Confidence 443 112211 11 22334 68887 443221 123456666542 2567999
Q ss_pred EEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcC-----CCC--ccHHHHHHHHHH----cCCCC-C
Q 001292 416 VVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN-----STD--GYNDALQEVASR----LGLLE-H 483 (1106)
Q Consensus 416 ~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~-----Gpe--rY~eeLkeLaek----lGL~d-~ 483 (1106)
.|.|+.. .||...-+.|+.+++++++... .++.| +.+.. +++ .+..++.+++.+ +|-.+ .
T Consensus 344 gVDrlD~----~KGi~~kl~A~e~~L~~~P~~~---gkvvl-vQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~ 415 (854)
T PLN02205 344 GVDDMDI----FKGISLKLLAMEQLLMQHPEWQ---GKVVL-VQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYD 415 (854)
T ss_pred EccCccc----ccCHHHHHHHHHHHHHhCcccc---CCEEE-EEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCc
Confidence 9999988 8899999999999998775443 23443 33332 111 123344455543 23211 1
Q ss_pred cEEEcC---ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCC-------------------CEEecCCCCchhhh
Q 001292 484 SVRHYG---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI-------------------PVITPDFPIIKEYV 541 (1106)
Q Consensus 484 rV~flG---~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~-------------------PVIASD~gGI~EiV 541 (1106)
-|+++. +.+++..+|..|||+++++..+ |.-++..|+.+|.. .+|.|.+.|....+
T Consensus 416 Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRD--GMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L 493 (854)
T PLN02205 416 PIVLIDAPLKFYERVAYYVVAECCLVTAVRD--GMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL 493 (854)
T ss_pred eEEEEecCCCHHHHHHHHHhccEEEeccccc--cccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHh
Confidence 255554 4588999999999999999997 99999999999864 37889999999888
Q ss_pred ccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 001292 542 AEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENV 605 (1106)
Q Consensus 542 ~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyesl 605 (1106)
. ..++++|.|++++|++|.+.++.+.. +++.--+..++.+..+.....++.+..-++..
T Consensus 494 ~---~Ai~VNP~d~~~~a~ai~~AL~m~~~--Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~ 552 (854)
T PLN02205 494 S---GAIRVNPWNIDAVADAMDSALEMAEP--EKQLRHEKHYRYVSTHDVGYWARSFLQDLERT 552 (854)
T ss_pred C---cCeEECCCCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 2 47899999999999999999998764 24444556667777666655555555444443
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.4e-05 Score=90.11 Aligned_cols=297 Identities=16% Similarity=0.121 Sum_probs=163.4
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCC-----c--------------hHH-------HHHHhHHH
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN-----S--------------HSL-------WEQIAGQI 276 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~-----~--------------~~i-------~r~lg~lv 276 (1106)
++|+++.|+.+.+ +..-.|+++|+.+==+|.++..+... . ..+ ++..+.++
T Consensus 2 ~ki~i~AGE~SGD---llGa~LikaLk~~~~~~efvGvgG~~m~aeG~~sl~~~~elsvmGf~EVL~~lp~llk~~~~~~ 78 (381)
T COG0763 2 LKIALSAGEASGD---LLGAGLIKALKARYPDVEFVGVGGEKMEAEGLESLFDMEELSVMGFVEVLGRLPRLLKIRRELV 78 (381)
T ss_pred ceEEEEecccchh---hHHHHHHHHHHhhCCCeEEEEeccHHHHhccCccccCHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 5888888876543 56677899999983367776654211 1 111 11222245
Q ss_pred HHhhccCccE---EEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhcc
Q 001292 277 SILGQEQYSL---IDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSR 353 (1106)
Q Consensus 277 kiIr~~~pDi---Ih~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~ 353 (1106)
+.+...++|+ ||.+.+.-.+...+.+.. .++|+|+-+--. -|... ++ +-....+.
T Consensus 79 ~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~----------p~i~iihYV~Ps---VWAWr------~~---Ra~~i~~~ 136 (381)
T COG0763 79 RYILANKPDVLILIDSPDFNLRVAKKLRKAG----------PKIKIIHYVSPS---VWAWR------PK---RAVKIAKY 136 (381)
T ss_pred HHHHhcCCCEEEEeCCCCCchHHHHHHHHhC----------CCCCeEEEECcc---eeeec------hh---hHHHHHHH
Confidence 5556688985 455666666666665521 347777653221 11111 11 11223456
Q ss_pred ccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEE-EEcccCccccccCCHHH
Q 001292 354 VNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVV-VVGSSFFYNELSWDYAV 432 (1106)
Q Consensus 354 AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL-~VGRl~~y~kg~Kg~dl 432 (1106)
+|.+.+.=+.....|....-. ...|++.=.|. .+-...+..+|++++++.+..++. ..|+... +...
T Consensus 137 ~D~lLailPFE~~~y~k~g~~-~~yVGHpl~d~-----i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~s------EI~r 204 (381)
T COG0763 137 VDHLLAILPFEPAFYDKFGLP-CTYVGHPLADE-----IPLLPDREAAREKLGIDADEKTLALLPGSRRS------EIRR 204 (381)
T ss_pred hhHeeeecCCCHHHHHhcCCC-eEEeCChhhhh-----ccccccHHHHHHHhCCCCCCCeEEEecCCcHH------HHHH
Confidence 788777766666664433332 56676632332 212234566899999987765544 5565333 3444
Q ss_pred HHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCC
Q 001292 433 AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVE 512 (1106)
Q Consensus 433 LLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~Ee 512 (1106)
++..|.+..++ ++...|+++| +++.-+..|.....+..+...... .+++. .++-.+.+.+||+.+..|
T Consensus 205 l~~~f~~a~~~---l~~~~~~~~~--vlp~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~a~~~aD~al~aS---- 272 (381)
T COG0763 205 LLPPFVQAAQE---LKARYPDLKF--VLPLVNAKYRRIIEEALKWEVAGL-SLILI--DGEKRKAFAAADAALAAS---- 272 (381)
T ss_pred HHHHHHHHHHH---HHhhCCCceE--EEecCcHHHHHHHHHHhhccccCc-eEEec--CchHHHHHHHhhHHHHhc----
Confidence 44444333322 2233488884 445544332233333333222211 23332 236778999999999776
Q ss_pred CCCcHHHHHHHHhCCCEEec-C----------------CCCchhhhccCCe--EEEEcCCCHHHHHHHHHHHHhCccc
Q 001292 513 QGFPSLIVRAMTFGIPVITP-D----------------FPIIKEYVAEGAQ--VIFFQKDNPEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 513 EGFGlvLLEAMA~G~PVIAS-D----------------~gGI~EiV~Dg~n--G~LV~~~D~eeLAeAI~~LLsDpel 571 (1106)
|.+.||+|.+|+|.|++ . .-+.+.++-+... -++-..-.++.|++++..++.|+..
T Consensus 273 ---GT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~ 347 (381)
T COG0763 273 ---GTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDR 347 (381)
T ss_pred ---cHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHh
Confidence 78999999999999976 1 1223333322100 0000112588999999999999854
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.2e-07 Score=92.54 Aligned_cols=142 Identities=9% Similarity=0.064 Sum_probs=84.0
Q ss_pred EEEeCC-CCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCC---ch-----------------HHHHHHhHHHHHhhccCc
Q 001292 226 GLILGN-MAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN---SH-----------------SLWEQIAGQISILGQEQY 284 (1106)
Q Consensus 226 alVlg~-L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~---~~-----------------~i~r~lg~lvkiIr~~~p 284 (1106)
+++... ...||.+..+.+++++|+++|++|+|++..... .. ..+.....+.+.++..++
T Consensus 2 li~~~~~~~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 81 (177)
T PF13439_consen 2 LITNIFLPNIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEELVKIFVKIPYPIRKRFLRSFFFMRRLRRLIKKEKP 81 (177)
T ss_dssp EEECC-TTSSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SSTEEEE---TT-SSTSS--HHHHHHHHHHHHHHHHT-
T ss_pred EEEEecCCCCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhhccceeeeeecccccccchhHHHHHHHHHHHHHcCC
Confidence 334333 345999999999999999999999999874322 00 111122236677888899
Q ss_pred cEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccc-------ccchhhhhhhHHhHHHHHHHHhccccEE
Q 001292 285 SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLA-------NRLPVYVERGFQNLLSYWKSVFSRVNVI 357 (1106)
Q Consensus 285 DiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls-------~r~~~Y~~~gleklis~~~~~l~~AD~V 357 (1106)
|+||.+.+...+...+..+ ++|+|++.|+.... .+...+.. .. .....++.+|.+
T Consensus 82 DiVh~~~~~~~~~~~~~~~------------~~~~v~~~H~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~i 143 (177)
T PF13439_consen 82 DIVHIHGPPAFWIALLACR------------KVPIVYTIHGPYFERRFLKSKLSPYSYLN---FR---IERKLYKKADRI 143 (177)
T ss_dssp SEEECCTTHCCCHHHHHHH------------CSCEEEEE-HHH--HHTTTTSCCCHHHHH---HC---TTHHHHCCSSEE
T ss_pred CeEEecccchhHHHHHhcc------------CCCEEEEeCCCcccccccccccchhhhhh---hh---hhhhHHhcCCEE
Confidence 9999988666555544442 57999999995421 11111001 00 112336899999
Q ss_pred EecCCChhhh--hcCCCCCCEEEeCCCCCCc
Q 001292 358 VFPDYTLPML--YSVLDAGNFFVIPGSPADV 386 (1106)
Q Consensus 358 Ia~S~~~~~~--~~gi~~~KI~VIpN~GVDl 386 (1106)
+++|....+. ..+++++++.|||| |||.
T Consensus 144 i~vS~~~~~~l~~~~~~~~ki~vI~n-gid~ 173 (177)
T PF13439_consen 144 IAVSESTKDELIKFGIPPEKIHVIYN-GIDT 173 (177)
T ss_dssp EESSHHHHHHHHHHT--SS-EEE-----B-C
T ss_pred EEECHHHHHHHHHhCCcccCCEEEEC-CccH
Confidence 9999776665 34788899999998 8998
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.54 E-value=7.7e-06 Score=95.18 Aligned_cols=285 Identities=14% Similarity=0.169 Sum_probs=161.0
Q ss_pred hHHHHHHHHHHHHHCCCEEEEEEcCCCCc-------------------hHH-------HHHHhHHHHHhhccCccE---E
Q 001292 237 RSLLLITVVKNLQKLGYVFKIYAVRSGNS-------------------HSL-------WEQIAGQISILGQEQYSL---I 287 (1106)
Q Consensus 237 esl~vv~LakaLqe~GyeVtV~t~~dg~~-------------------~~i-------~r~lg~lvkiIr~~~pDi---I 287 (1106)
..+....|+++|+++.-++.++..+.... ..+ ++....+.+.+...+||+ |
T Consensus 10 GD~~ga~Li~~Lk~~~p~~~~~GvGG~~M~~~G~~~l~d~~~lsvmG~~Evl~~l~~~~~~~~~~~~~~~~~~pd~vIlI 89 (373)
T PF02684_consen 10 GDLHGARLIRALKARDPDIEFYGVGGPRMQAAGVESLFDMEELSVMGFVEVLKKLPKLKRLFRKLVERIKEEKPDVVILI 89 (373)
T ss_pred HHHHHHHHHHHHHhhCCCcEEEEEechHHHhCCCceecchHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 45677889999999987787777643211 111 112223566677789995 4
Q ss_pred EEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhh
Q 001292 288 DWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML 367 (1106)
Q Consensus 288 h~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~ 367 (1106)
|.+.+...+...+.++. ..+|+|+-+-=. -|... .+.+ +..-+.+|.+++.-......
T Consensus 90 D~pgFNlrlak~lk~~~----------~~~~viyYI~Pq---vWAWr------~~R~---~~i~~~~D~ll~ifPFE~~~ 147 (373)
T PF02684_consen 90 DYPGFNLRLAKKLKKRG----------IPIKVIYYISPQ---VWAWR------PGRA---KKIKKYVDHLLVIFPFEPEF 147 (373)
T ss_pred CCCCccHHHHHHHHHhC----------CCceEEEEECCc---eeeeC------ccHH---HHHHHHHhheeECCcccHHH
Confidence 55777777776666532 223366652211 11111 0001 11223456666655555555
Q ss_pred hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEE-EEcccCccccccCCHHHHHHHHHHhHHHHHh
Q 001292 368 YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVV-VVGSSFFYNELSWDYAVAMHDVGPLLIKYAR 446 (1106)
Q Consensus 368 ~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL-~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~ak 446 (1106)
|.... -+..+++|.=+|. ..+.......++.+ ++++.++|+ .-|+.. .|..+....++++++.+.++
T Consensus 148 y~~~g-~~~~~VGHPl~d~-----~~~~~~~~~~~~~~-l~~~~~iIaLLPGSR~--~EI~rllP~~l~aa~~l~~~--- 215 (373)
T PF02684_consen 148 YKKHG-VPVTYVGHPLLDE-----VKPEPDRAEAREKL-LDPDKPIIALLPGSRK--SEIKRLLPIFLEAAKLLKKQ--- 215 (373)
T ss_pred HhccC-CCeEEECCcchhh-----hccCCCHHHHHHhc-CCCCCcEEEEeCCCCH--HHHHHHHHHHHHHHHHHHHh---
Confidence 44332 2567777743342 33332344556666 777776555 456532 24444556667777666543
Q ss_pred hccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhC
Q 001292 447 RNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFG 526 (1106)
Q Consensus 447 lk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G 526 (1106)
.|+++|+ ++.-+..+.+.+++.....+... .+.. ..++..++|+.||+.+..| |.+.||++.+|
T Consensus 216 ----~p~l~fv--vp~a~~~~~~~i~~~~~~~~~~~-~~~~--~~~~~~~~m~~ad~al~~S-------GTaTLE~Al~g 279 (373)
T PF02684_consen 216 ----RPDLQFV--VPVAPEVHEELIEEILAEYPPDV-SIVI--IEGESYDAMAAADAALAAS-------GTATLEAALLG 279 (373)
T ss_pred ----CCCeEEE--EecCCHHHHHHHHHHHHhhCCCC-eEEE--cCCchHHHHHhCcchhhcC-------CHHHHHHHHhC
Confidence 3888753 34333332344566665544432 2332 2356778999999999776 78999999999
Q ss_pred CCEEec-----------------CCCCchhhhccCC--eEEEEcCCCHHHHHHHHHHHHhCccc
Q 001292 527 IPVITP-----------------DFPIIKEYVAEGA--QVIFFQKDNPEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 527 ~PVIAS-----------------D~gGI~EiV~Dg~--nG~LV~~~D~eeLAeAI~~LLsDpel 571 (1106)
+|.|+. +.-+++.++-+.. --++-+.-+++.+++++..+++|++.
T Consensus 280 ~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 280 VPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENPEK 343 (373)
T ss_pred CCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCHHH
Confidence 999965 1222333332211 01122234799999999999999875
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.52 E-value=0.00011 Score=85.01 Aligned_cols=98 Identities=19% Similarity=0.146 Sum_probs=73.0
Q ss_pred EEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCC
Q 001292 455 KFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF 534 (1106)
Q Consensus 455 kfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~ 534 (1106)
++++.+|..... . ..+++ +|.+.++. ....+|..||++|.- |+..++.||+++|+|+|+...
T Consensus 271 ~~i~~~g~~~~~--~--------~~~~~-~v~~~~~~-p~~~ll~~~d~~I~h------gG~~t~~eal~~GvP~v~~P~ 332 (401)
T cd03784 271 RAILSLGWGGLG--A--------EDLPD-NVRVVDFV-PHDWLLPRCAAVVHH------GGAGTTAAALRAGVPQLVVPF 332 (401)
T ss_pred eEEEEccCcccc--c--------cCCCC-ceEEeCCC-CHHHHhhhhheeeec------CCchhHHHHHHcCCCEEeeCC
Confidence 556777776543 1 24455 89999986 477889999999943 556899999999999999854
Q ss_pred CC----chhhhccCCeEEEEcCC--CHHHHHHHHHHHHhCcc
Q 001292 535 PI----IKEYVAEGAQVIFFQKD--NPEGLSRAFSLFISNGK 570 (1106)
Q Consensus 535 gG----I~EiV~Dg~nG~LV~~~--D~eeLAeAI~~LLsDpe 570 (1106)
.+ ..+.+.....|..++.. ++++++++|.++++++.
T Consensus 333 ~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~~~~ 374 (401)
T cd03784 333 FGDQPFWAARVAELGAGPALDPRELTAERLAAALRRLLDPPS 374 (401)
T ss_pred CCCcHHHHHHHHHCCCCCCCCcccCCHHHHHHHHHHHhCHHH
Confidence 43 45566555677766554 68999999999998654
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.1e-05 Score=87.96 Aligned_cols=103 Identities=18% Similarity=0.206 Sum_probs=72.8
Q ss_pred eEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecC
Q 001292 454 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 533 (1106)
Q Consensus 454 ikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD 533 (1106)
+++++.+|.+... ..++ .+++ +|.+.++... ..+|..||++|..+ ...+++||+++|+|+|+..
T Consensus 255 ~~~i~~~g~~~~~--~~~~------~~~~-~v~~~~~~p~-~~ll~~~~~~I~hg------G~~t~~Eal~~G~P~v~~p 318 (392)
T TIGR01426 255 WHVVLSVGRGVDP--ADLG------ELPP-NVEVRQWVPQ-LEILKKADAFITHG------GMNSTMEALFNGVPMVAVP 318 (392)
T ss_pred CeEEEEECCCCCh--hHhc------cCCC-CeEEeCCCCH-HHHHhhCCEEEECC------CchHHHHHHHhCCCEEecC
Confidence 3556777776542 2222 2344 7998887754 47899999999653 3468999999999999964
Q ss_pred C----CCchhhhccCCeEEEEcCC--CHHHHHHHHHHHHhCcccH
Q 001292 534 F----PIIKEYVAEGAQVIFFQKD--NPEGLSRAFSLFISNGKLS 572 (1106)
Q Consensus 534 ~----gGI~EiV~Dg~nG~LV~~~--D~eeLAeAI~~LLsDpelR 572 (1106)
. ..+...+.+...|..++.. ++++++++|.++++|++.+
T Consensus 319 ~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~~~ 363 (392)
T TIGR01426 319 QGADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSDPRYA 363 (392)
T ss_pred CcccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcCHHHH
Confidence 3 3344555555577766543 5789999999999998863
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.3e-05 Score=91.07 Aligned_cols=288 Identities=11% Similarity=0.070 Sum_probs=178.7
Q ss_pred cEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCCh
Q 001292 285 SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTL 364 (1106)
Q Consensus 285 DiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~ 364 (1106)
|+|-.|.|...++..+..... ...++.+..|-- +...-.+...+..+.+ ...+-.||.|-+++...
T Consensus 149 DiIWVhDYhL~L~P~mlR~~~---------~~~~IgfFlHiP-fPssEvfr~lP~r~eI----l~gll~~dligFqt~~y 214 (486)
T COG0380 149 DIIWVHDYHLLLVPQMLRERI---------PDAKIGFFLHIP-FPSSEVFRCLPWREEI----LEGLLGADLIGFQTESY 214 (486)
T ss_pred CEEEEEechhhhhHHHHHHhC---------CCceEEEEEeCC-CCCHHHHhhCchHHHH----HHHhhcCCeeEecCHHH
Confidence 678889999888887776543 334666766663 1111111111111222 22355899999987654
Q ss_pred hhh-------hcC-----------CCCC--CEEEeCCCCCCcccccccCcc----hhHHHHHHHcCCCCCcEEEEEEccc
Q 001292 365 PML-------YSV-----------LDAG--NFFVIPGSPADVWAVEAYSKS----HEKYQLRKENGFLKDEIVVVVVGSS 420 (1106)
Q Consensus 365 ~~~-------~~g-----------i~~~--KI~VIpN~GVDl~~~e~F~ps----~s~~~LR~~lGL~~d~~VIL~VGRl 420 (1106)
... ..+ .... ++..+| +|+|...+...... ....++++.++ .+..+|+.+-|+
T Consensus 215 ~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~P-IgID~~~~~~~~~~~~v~~~~~el~~~~~--~~~kiivgvDRl 291 (486)
T COG0380 215 ARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFP-IGIDPEEFERALKSPSVQEKVLELKAELG--RNKKLIVGVDRL 291 (486)
T ss_pred HHHHHHHHHHhccccccccccccccCCceEEEEEEe-eecCHHHHHHhhcCCchhhHHHHHHHHhc--CCceEEEEehhc
Confidence 433 111 1112 233345 68887322222111 12344555543 247789999998
Q ss_pred CccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCc------cHHHHHHHHHH----cCCCC-CcEEEcC
Q 001292 421 FFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG------YNDALQEVASR----LGLLE-HSVRHYG 489 (1106)
Q Consensus 421 ~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gper------Y~eeLkeLaek----lGL~d-~rV~flG 489 (1106)
.. .||...-+.|+.+|+.++++-.. ++.++-|+...... +..++++++.+ +|-.+ +-|+|+-
T Consensus 292 Dy----~kGi~~rl~Afe~lL~~~Pe~~~---kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~ 364 (486)
T COG0380 292 DY----SKGIPQRLLAFERLLEEYPEWRG---KVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLH 364 (486)
T ss_pred cc----ccCcHHHHHHHHHHHHhChhhhC---ceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEe
Confidence 88 88999999999999988766543 44433333322111 12333444433 22211 1255554
Q ss_pred ---ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCC----CEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHH
Q 001292 490 ---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI----PVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAF 562 (1106)
Q Consensus 490 ---~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~----PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI 562 (1106)
..+++..+|..||++++++..+ |..++..|..||.- |.|.|.+.|....+.+ .++++|.|.+++|++|
T Consensus 365 ~~~~~~~l~al~~~aDv~lVtplrD--GMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliVNP~d~~~va~ai 439 (486)
T COG0380 365 RDLDRNELLALYRAADVMLVTPLRD--GMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIVNPWDTKEVADAI 439 (486)
T ss_pred ccCCHHHHHHHHhhhceeeeccccc--cccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeECCCChHHHHHHH
Confidence 4478999999999999999997 99999999999854 8889999999988844 7899999999999999
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHH
Q 001292 563 SLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILE 603 (1106)
Q Consensus 563 ~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLye 603 (1106)
.+.|+-+.. ++++--+..++.+..+.....+..+..-+.
T Consensus 440 ~~AL~m~~e--Er~~r~~~~~~~v~~~d~~~W~~~fl~~la 478 (486)
T COG0380 440 KRALTMSLE--ERKERHEKLLKQVLTHDVARWANSFLDDLA 478 (486)
T ss_pred HHHhcCCHH--HHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 999997764 244444455555555555555555444443
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.39 E-value=0.00014 Score=84.07 Aligned_cols=310 Identities=16% Similarity=0.116 Sum_probs=185.9
Q ss_pred CCEEEEEeCCCCCChhHHHHHHHHHHHHHCC-CEEEEEEcCCCC----chHHHH--------------------------
Q 001292 222 PPRIGLILGNMAKDSRSLLLITVVKNLQKLG-YVFKIYAVRSGN----SHSLWE-------------------------- 270 (1106)
Q Consensus 222 ~~RIalVlg~L~~gGesl~vv~LakaLqe~G-yeVtV~t~~dg~----~~~i~r-------------------------- 270 (1106)
.+||+.|+|. -++-+-+.++++++++.+ .+..|+.++... ....++
T Consensus 3 ~~Kv~~I~GT---RPE~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~~~i~~pdy~L~i~~~~~tl~~~t~~ 79 (383)
T COG0381 3 MLKVLTIFGT---RPEAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVLELFGIRKPDYDLNIMKPGQTLGEITGN 79 (383)
T ss_pred ceEEEEEEec---CHHHHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHHHHHhCCCCCCcchhccccCCCHHHHHHH
Confidence 4688888765 467788899999999996 777666553211 111111
Q ss_pred HHhHHHHHhhccCccEEEEcc-ccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHH
Q 001292 271 QIAGQISILGQEQYSLIDWSI-FDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKS 349 (1106)
Q Consensus 271 ~lg~lvkiIr~~~pDiIh~~~-~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~ 349 (1106)
.+-.+.+++...+||.+-.|. -...++.+++... .+|||... ++++...-.++|.-...++.+
T Consensus 80 ~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~----------~~IpV~Hv--EAGlRt~~~~~PEE~NR~l~~---- 143 (383)
T COG0381 80 IIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAAFY----------LKIPVGHV--EAGLRTGDLYFPEEINRRLTS---- 143 (383)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHHH----------hCCceEEE--ecccccCCCCCcHHHHHHHHH----
Confidence 111256777788999877764 3344454555532 57887766 443322111223211122222
Q ss_pred HhccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHH-cCCCCCcEEEEEEcccCccccc
Q 001292 350 VFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKE-NGFLKDEIVVVVVGSSFFYNEL 426 (1106)
Q Consensus 350 ~l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~-lGL~~d~~VIL~VGRl~~y~kg 426 (1106)
.-+++.++++...... ..|.+++++++++|.-+|........ .......... ++...++.+++.+=|... .+
T Consensus 144 --~~S~~hfapte~ar~nLl~EG~~~~~IfvtGnt~iDal~~~~~~-~~~~~~~~~~~~~~~~~~~iLvT~HRreN--~~ 218 (383)
T COG0381 144 --HLSDLHFAPTEIARKNLLREGVPEKRIFVTGNTVIDALLNTRDR-VLEDSKILAKGLDDKDKKYILVTAHRREN--VG 218 (383)
T ss_pred --HhhhhhcCChHHHHHHHHHcCCCccceEEeCChHHHHHHHHHhh-hccchhhHHhhhccccCcEEEEEcchhhc--cc
Confidence 2455667777544433 67889999999999766652111000 0111111111 444444555554443332 11
Q ss_pred cCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHH-HHcCCCCCcEEEcCCh--hhHHHHHHHcCe
Q 001292 427 SWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVA-SRLGLLEHSVRHYGFN--GDVNGVLLMADI 503 (1106)
Q Consensus 427 ~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLa-eklGL~d~rV~flG~~--eDL~~LyaaADV 503 (1106)
+++..+++++.++.+++ +++. ++.+.++. ..+++.. ..++-.+ +|+++.+. .+...++..|-+
T Consensus 219 -~~~~~i~~al~~i~~~~-------~~~~--viyp~H~~---~~v~e~~~~~L~~~~-~v~li~pl~~~~f~~L~~~a~~ 284 (383)
T COG0381 219 -EPLEEICEALREIAEEY-------PDVI--VIYPVHPR---PRVRELVLKRLKNVE-RVKLIDPLGYLDFHNLMKNAFL 284 (383)
T ss_pred -ccHHHHHHHHHHHHHhC-------CCce--EEEeCCCC---hhhhHHHHHHhCCCC-cEEEeCCcchHHHHHHHHhceE
Confidence 56778888887777544 5664 67888875 5566666 4555554 79999876 467778888866
Q ss_pred EEEccCCCCCCCcHHHHHHHHhCCCEEecC-CCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHH
Q 001292 504 VLYGSSQVEQGFPSLIVRAMTFGIPVITPD-FPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASA 581 (1106)
Q Consensus 504 fV~PS~~EeEGFGlvLLEAMA~G~PVIASD-~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~ 581 (1106)
++-=| |...=||-.+|+||++-. ...=+|.++.| +-.++. .+.+.+.+++..++++++. .++|+..
T Consensus 285 iltDS-------GgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~~~i~~~~~~ll~~~~~---~~~m~~~ 351 (383)
T COG0381 285 ILTDS-------GGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDEENILDAATELLEDEEF---YERMSNA 351 (383)
T ss_pred EEecC-------CchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccHHHHHHHHHHHhhChHH---HHHHhcc
Confidence 55322 455679999999999974 45567767444 444554 5789999999999999886 4555443
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.37 E-value=7.1e-06 Score=97.46 Aligned_cols=182 Identities=13% Similarity=0.109 Sum_probs=111.5
Q ss_pred HHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCC
Q 001292 401 LRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGL 480 (1106)
Q Consensus 401 LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL 480 (1106)
.|.++|++++.++++.+.++. |=....++.+.+++++. |+.+ |++....... .+.+++.+++.|+
T Consensus 275 ~R~~~gLp~d~vvF~~fn~~~------KI~p~~l~~W~~IL~~v-------P~S~-L~L~~~~~~~-~~~l~~~~~~~Gv 339 (468)
T PF13844_consen 275 TRAQYGLPEDAVVFGSFNNLF------KISPETLDLWARILKAV-------PNSR-LWLLRFPASG-EARLRRRFAAHGV 339 (468)
T ss_dssp ETGGGT--SSSEEEEE-S-GG------G--HHHHHHHHHHHHHS-------TTEE-EEEEETSTTH-HHHHHHHHHHTTS
T ss_pred CHHHcCCCCCceEEEecCccc------cCCHHHHHHHHHHHHhC-------CCcE-EEEeeCCHHH-HHHHHHHHHHcCC
Confidence 388999999998888887644 35567888888888654 8887 4444433322 4788899999999
Q ss_pred CCCcEEEcCC--hhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCch-----hhhcc-CCeEEEEcC
Q 001292 481 LEHSVRHYGF--NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK-----EYVAE-GAQVIFFQK 552 (1106)
Q Consensus 481 ~d~rV~flG~--~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~-----EiV~D-g~nG~LV~~ 552 (1106)
...+|.|.+. .++....|..+||++=+..+ +.+.+.+||+.+|+|||+-.-.... .++.. |-..++.
T Consensus 340 ~~~Ri~f~~~~~~~ehl~~~~~~DI~LDT~p~---nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA-- 414 (468)
T PF13844_consen 340 DPDRIIFSPVAPREEHLRRYQLADICLDTFPY---NGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA-- 414 (468)
T ss_dssp -GGGEEEEE---HHHHHHHGGG-SEEE--SSS-----SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB---
T ss_pred ChhhEEEcCCCCHHHHHHHhhhCCEEeeCCCC---CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC--
Confidence 8779999984 45666788999999976544 6789999999999999986322221 11111 2122222
Q ss_pred CCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH--HhcHH-HHHHHHHHHHHHH
Q 001292 553 DNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAK--NMLAL-DCVTRYARILENV 605 (1106)
Q Consensus 553 ~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ak--e~fse-e~v~~Y~eLyesl 605 (1106)
.|.+++.+.-.+|.+|++. ++++...-++... ..|.. ..+..+++.|+.+
T Consensus 415 ~s~~eYv~~Av~La~D~~~---l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 415 DSEEEYVEIAVRLATDPER---LRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp SSHHHHHHHHHHHHH-HHH---HHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCHHH---HHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 5899999999999999998 4555555554432 23433 3334777777654
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.33 E-value=0.00022 Score=86.99 Aligned_cols=301 Identities=10% Similarity=0.072 Sum_probs=165.6
Q ss_pred cCCCCCCCCCCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCc-------------------hHHHH---
Q 001292 213 RSTPRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS-------------------HSLWE--- 270 (1106)
Q Consensus 213 ~Sv~r~g~r~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~-------------------~~i~r--- 270 (1106)
.+-.+.....++|.++.|+... .+....|+++|+++.-++.+...+.... .++.+
T Consensus 217 ~~~~~~~~~~~kIfI~AGE~SG---DlhgA~Li~aLk~~~P~i~~~GvGG~~M~aaG~e~l~d~~eLsVmG~~EVL~~l~ 293 (608)
T PRK01021 217 KEARRKPFSNTSCFISAGEHSG---DTLGGNLLKEIKALYPDIHCFGVGGPQMRAEGFHPLFNMEEFQVSGFWEVLLALF 293 (608)
T ss_pred hhcccccccCCeEEEEeccccH---HHHHHHHHHHHHhcCCCcEEEEEccHHHHhCcCcccCChHHhhhhhHHHHHHHHH
Confidence 3344456777899999988643 4667788999999877777776643211 11111
Q ss_pred ----HHhHHHHHhhccCccEE---EEccccHHHHHHHHHHHhhhhcccCCCCC--CcEEEEEcCCcccccchhhhhhhHH
Q 001292 271 ----QIAGQISILGQEQYSLI---DWSIFDGIIADSLEAKEAISSLMQEPFHS--IPLVWIIQEDSLANRLPVYVERGFQ 341 (1106)
Q Consensus 271 ----~lg~lvkiIr~~~pDiI---h~~~~~~i~v~~La~k~~idII~te~~~g--IPVI~tIHna~Ls~r~~~Y~~~gle 341 (1106)
....+.+.+...+||++ |.+.+.-.+...+.+ .+ +|+|+-+-=. -|... +
T Consensus 294 ~l~~~~~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk------------~Gi~ipviyYVsPq---VWAWR------~ 352 (608)
T PRK01021 294 KLWYRYRKLYKTILKTNPRTVICIDFPDFHFLLIKKLRK------------RGYKGKIVHYVCPS---IWAWR------P 352 (608)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHh------------cCCCCCEEEEECcc---ceeeC------c
Confidence 22224566667899954 556666655554444 34 4877663221 11111 1
Q ss_pred hHHHHHHHHhccccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEE-EEEccc
Q 001292 342 NLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVV-VVVGSS 420 (1106)
Q Consensus 342 klis~~~~~l~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VI-L~VGRl 420 (1106)
+.+ +..-+.+|.+++.-+.....|... .-++..+++.=+|. ........+.++++|++++.++| +.-|+.
T Consensus 353 ~Ri---kki~k~vD~ll~IfPFE~~~y~~~-gv~v~yVGHPL~d~-----i~~~~~~~~~r~~lgl~~~~~iIaLLPGSR 423 (608)
T PRK01021 353 KRK---TILEKYLDLLLLILPFEQNLFKDS-PLRTVYLGHPLVET-----ISSFSPNLSWKEQLHLPSDKPIVAAFPGSR 423 (608)
T ss_pred chH---HHHHHHhhhheecCccCHHHHHhc-CCCeEEECCcHHhh-----cccCCCHHHHHHHcCCCCCCCEEEEECCCC
Confidence 111 112234455555544444444322 22467777633342 22223355678899997665544 556754
Q ss_pred CccccccCCHHHHHHHHH--HhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHH
Q 001292 421 FFYNELSWDYAVAMHDVG--PLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVL 498 (1106)
Q Consensus 421 ~~y~kg~Kg~dlLLeA~k--~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~Ly 498 (1106)
.. |..+....+++|++ .+. ++.+|+ ++..+..+.+.+++..+..++. .+.+.... +-.+++
T Consensus 424 ~~--EI~rllPv~l~aa~~~~l~----------~~l~fv--vp~a~~~~~~~i~~~~~~~~~~--~~~ii~~~-~~~~~m 486 (608)
T PRK01021 424 RG--DILRNLTIQVQAFLASSLA----------STHQLL--VSSANPKYDHLILEVLQQEGCL--HSHIVPSQ-FRYELM 486 (608)
T ss_pred HH--HHHHHHHHHHHHHHHHHhc----------cCeEEE--EecCchhhHHHHHHHHhhcCCC--CeEEecCc-chHHHH
Confidence 32 33334466666664 221 245643 3333332236667766543321 23333221 236999
Q ss_pred HHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec-CCC------------------CchhhhccCC-eEEEE---cCCCH
Q 001292 499 LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP-DFP------------------IIKEYVAEGA-QVIFF---QKDNP 555 (1106)
Q Consensus 499 aaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS-D~g------------------GI~EiV~Dg~-nG~LV---~~~D~ 555 (1106)
++||+.+..| |.+.||++.+|+|.|+. ... +.+.++.+.. .--++ +.-++
T Consensus 487 ~aaD~aLaaS-------GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tp 559 (608)
T PRK01021 487 RECDCALAKC-------GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQP 559 (608)
T ss_pred HhcCeeeecC-------CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCH
Confidence 9999999887 79999999999999975 222 1222222111 01122 23468
Q ss_pred HHHHHHHHHHHhCccc
Q 001292 556 EGLSRAFSLFISNGKL 571 (1106)
Q Consensus 556 eeLAeAI~~LLsDpel 571 (1106)
+.+++++ +++.|++.
T Consensus 560 e~La~~l-~lL~d~~~ 574 (608)
T PRK01021 560 EEVAAAL-DILKTSQS 574 (608)
T ss_pred HHHHHHH-HHhcCHHH
Confidence 8999886 78888775
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.32 E-value=0.0002 Score=80.22 Aligned_cols=269 Identities=14% Similarity=0.161 Sum_probs=143.8
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCc--------------------------hHHH-------
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS--------------------------HSLW------- 269 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~--------------------------~~i~------- 269 (1106)
+||++.+.+.+.|..+. .+.++++| +|++|++++.+.... ....
T Consensus 1 MkIl~~v~~~G~GH~~R-~~~la~~L--rg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASR-CLALARAL--RGHEVTFITSGPAPEFLKPRFPVREIPGLGPIQENGRLDRWKTVRNNIRWLA 77 (318)
T ss_pred CEEEEEeCCCCcCHHHH-HHHHHHHH--ccCceEEEEcCCcHHHhccccCEEEccCceEeccCCccchHHHHHHHHHhhH
Confidence 68999888866655554 55699999 489999998754310 0000
Q ss_pred ---HHHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccc-cchhhhhhhHHhHHH
Q 001292 270 ---EQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLAN-RLPVYVERGFQNLLS 345 (1106)
Q Consensus 270 ---r~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~-r~~~Y~~~gleklis 345 (1106)
+.+....+.++..+||+|-.-.+... ....+ ..++|+|...|...... ............++.
T Consensus 78 ~~~~~~~~~~~~l~~~~pDlVIsD~~~~~---~~aa~----------~~giP~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 144 (318)
T PF13528_consen 78 RLARRIRREIRWLREFRPDLVISDFYPLA---ALAAR----------RAGIPVIVISNQYWFLHPNFWLPWDQDFGRLIE 144 (318)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEcChHHH---HHHHH----------hcCCCEEEEEehHHcccccCCcchhhhHHHHHH
Confidence 01112455667778887766543321 12222 26899987766642221 111100111122222
Q ss_pred HHHH-H-hccccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCcc
Q 001292 346 YWKS-V-FSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFY 423 (1106)
Q Consensus 346 ~~~~-~-l~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y 423 (1106)
.+.. . +..++..+..+..... ....++.+++.. + +...+... -.+...+++++|...
T Consensus 145 ~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~p~-~-------------~~~~~~~~-~~~~~~iLv~~gg~~-- 203 (318)
T PF13528_consen 145 RYIDRYHFPPADRRLALSFYPPL----PPFFRVPFVGPI-I-------------RPEIRELP-PEDEPKILVYFGGGG-- 203 (318)
T ss_pred HhhhhccCCcccceecCCccccc----cccccccccCch-h-------------cccccccC-CCCCCEEEEEeCCCc--
Confidence 2211 1 2333333333322100 011112222211 1 11111111 123566888888433
Q ss_pred ccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh-hhHHHHHHHcC
Q 001292 424 NELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN-GDVNGVLLMAD 502 (1106)
Q Consensus 424 ~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~-eDL~~LyaaAD 502 (1106)
...++++++.+ ++..+ +++|..... . . .. +|.+.++. .++.++++.||
T Consensus 204 ------~~~~~~~l~~~-----------~~~~~-~v~g~~~~~--~---------~-~~-ni~~~~~~~~~~~~~m~~ad 252 (318)
T PF13528_consen 204 ------PGDLIEALKAL-----------PDYQF-IVFGPNAAD--P---------R-PG-NIHVRPFSTPDFAELMAAAD 252 (318)
T ss_pred ------HHHHHHHHHhC-----------CCCeE-EEEcCCccc--c---------c-CC-CEEEeecChHHHHHHHHhCC
Confidence 23455555332 45564 445765421 0 0 33 89999976 89999999999
Q ss_pred eEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCch------hhhccCCeEEEEcC--CCHHHHHHHHHHH
Q 001292 503 IVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK------EYVAEGAQVIFFQK--DNPEGLSRAFSLF 565 (1106)
Q Consensus 503 VfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~------EiV~Dg~nG~LV~~--~D~eeLAeAI~~L 565 (1106)
++|..+ +-.++.||+++|+|+|+-...+.. +.+.....|..++. -+++.|+++|.++
T Consensus 253 ~vIs~~------G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 253 LVISKG------GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred EEEECC------CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence 999553 235699999999999998765533 44544445555443 3678888888764
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.3e-06 Score=82.69 Aligned_cols=132 Identities=11% Similarity=0.140 Sum_probs=75.0
Q ss_pred ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchH----------------------HHHHHhHHHHHh--hccCccEEEEc
Q 001292 235 DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS----------------------LWEQIAGQISIL--GQEQYSLIDWS 290 (1106)
Q Consensus 235 gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~----------------------i~r~lg~lvkiI--r~~~pDiIh~~ 290 (1106)
||.+.++..++++|.++|++|+|++..+..... .++....+..++ +..++|+||++
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Dvv~~~ 80 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDEEEEDGVRVHRLPLPRRPWPLRLLRFLRRLRRLLAARRERPDVVHAH 80 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-SEEETTEEEEEE--S-SSSGGGHCCHHHHHHHHCHHCT---SEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccccccCCceEEeccCCccchhhhhHHHHHHHHHHHhhhccCCeEEEec
Confidence 688999999999999999999999975432110 111222355666 77899999999
Q ss_pred cccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHH-HHHHHHhccccEEEecCCChhhh--
Q 001292 291 IFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLL-SYWKSVFSRVNVIVFPDYTLPML-- 367 (1106)
Q Consensus 291 ~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~glekli-s~~~~~l~~AD~VIa~S~~~~~~-- 367 (1106)
.+...++..+..+. .++|+|+++|+......... . ..+. ......++.+|.+++.|......
T Consensus 81 ~~~~~~~~~~~~~~----------~~~p~v~~~h~~~~~~~~~~--~---~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~ 145 (160)
T PF13579_consen 81 SPTAGLVAALARRR----------RGIPLVVTVHGTLFRRGSRW--K---RRLYRWLERRLLRRADRVIVVSEAMRRYLR 145 (160)
T ss_dssp HHHHHHHHHHHHHH----------HT--EEEE-SS-T------H--H---HHHHHHHHHHHHHH-SEEEESSHHHHHHHH
T ss_pred ccchhHHHHHHHHc----------cCCcEEEEECCCchhhccch--h---hHHHHHHHHHHHhcCCEEEECCHHHHHHHH
Confidence 87666666555522 47899999998532221100 0 1111 11245688999999999776655
Q ss_pred hcCCCCCCEEEeCC
Q 001292 368 YSVLDAGNFFVIPG 381 (1106)
Q Consensus 368 ~~gi~~~KI~VIpN 381 (1106)
..+.+++++.||||
T Consensus 146 ~~g~~~~ri~vipn 159 (160)
T PF13579_consen 146 RYGVPPDRIHVIPN 159 (160)
T ss_dssp HH---GGGEEE---
T ss_pred HhCCCCCcEEEeCc
Confidence 45788899999998
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.22 E-value=0.00038 Score=80.26 Aligned_cols=267 Identities=15% Similarity=0.122 Sum_probs=150.6
Q ss_pred hhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHHHHHHh-------------------------HHHHHhhccCccEEEEc
Q 001292 236 SRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIA-------------------------GQISILGQEQYSLIDWS 290 (1106)
Q Consensus 236 Gesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i~r~lg-------------------------~lvkiIr~~~pDiIh~~ 290 (1106)
+...+.-++++.|+++||+|.|++-..+....+.+..| .+.+.++..+||++-..
T Consensus 11 ~hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~yg~~y~~iG~~g~~~~~Kl~~~~~R~~~l~~~~~~~~pDv~is~ 90 (335)
T PF04007_consen 11 AHVHFFKNIIRELEKRGHEVLITARDKDETEELLDLYGIDYIVIGKHGDSLYGKLLESIERQYKLLKLIKKFKPDVAISF 90 (335)
T ss_pred hHHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHHHcCCCeEEEcCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCEEEec
Confidence 46667889999999999999999875543333322111 15566666788876654
Q ss_pred cccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhh--h
Q 001292 291 IFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML--Y 368 (1106)
Q Consensus 291 ~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~--~ 368 (1106)
.... +...+. ..++|.|....+.. . .. . -+..+..+|.++++....... .
T Consensus 91 ~s~~--a~~va~-----------~lgiP~I~f~D~e~-a---~~---------~--~~Lt~Pla~~i~~P~~~~~~~~~~ 142 (335)
T PF04007_consen 91 GSPE--AARVAF-----------GLGIPSIVFNDTEH-A---IA---------Q--NRLTLPLADVIITPEAIPKEFLKR 142 (335)
T ss_pred CcHH--HHHHHH-----------HhCCCeEEEecCch-h---hc---------c--ceeehhcCCeeECCcccCHHHHHh
Confidence 3222 222222 15789888755420 0 00 0 012345788999887544332 2
Q ss_pred cCCCCCCEEEeCCCCCCcccc-cccCcchhHHHHHHHcCCCCCcEEEEEEcc-cCccccccCCHHHHHHHHHHhHHHHHh
Q 001292 369 SVLDAGNFFVIPGSPADVWAV-EAYSKSHEKYQLRKENGFLKDEIVVVVVGS-SFFYNELSWDYAVAMHDVGPLLIKYAR 446 (1106)
Q Consensus 369 ~gi~~~KI~VIpN~GVDl~~~-e~F~ps~s~~~LR~~lGL~~d~~VIL~VGR-l~~y~kg~Kg~dlLLeA~k~Ll~k~ak 446 (1106)
.|.. +++...+ |++-+.. ..|.| .....+++|+.++..+++=... -..|+.+.+ ..+-+.++.|.+ .
T Consensus 143 ~G~~-~~i~~y~--G~~E~ayl~~F~P---d~~vl~~lg~~~~~yIvvR~~~~~A~y~~~~~--~i~~~ii~~L~~-~-- 211 (335)
T PF04007_consen 143 FGAK-NQIRTYN--GYKELAYLHPFKP---DPEVLKELGLDDEPYIVVRPEAWKASYDNGKK--SILPEIIEELEK-Y-- 211 (335)
T ss_pred cCCc-CCEEEEC--CeeeEEeecCCCC---ChhHHHHcCCCCCCEEEEEeccccCeeecCcc--chHHHHHHHHHh-h--
Confidence 2333 3444334 3543211 23444 3456778998766555442211 112444422 223333333321 1
Q ss_pred hccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhC
Q 001292 447 RNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFG 526 (1106)
Q Consensus 447 lk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G 526 (1106)
.+. ++++++..+. . ++.++. +|.+....-+...++.-||++|- +.|.-..||+.+|
T Consensus 212 -----~~~--vV~ipr~~~~--~---~~~~~~-----~~~i~~~~vd~~~Ll~~a~l~Ig-------~ggTMa~EAA~LG 267 (335)
T PF04007_consen 212 -----GRN--VVIIPRYEDQ--R---ELFEKY-----GVIIPPEPVDGLDLLYYADLVIG-------GGGTMAREAALLG 267 (335)
T ss_pred -----Cce--EEEecCCcch--h---hHHhcc-----CccccCCCCCHHHHHHhcCEEEe-------CCcHHHHHHHHhC
Confidence 221 4566665432 1 233322 24455544466789999999983 4468889999999
Q ss_pred CCEEecCCC---CchhhhccCCeEEEEcCCCHHHHHHHHHHHHh
Q 001292 527 IPVITPDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 567 (1106)
Q Consensus 527 ~PVIASD~g---GI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLs 567 (1106)
+|+|..-.+ ++-+++. +.|+++...|++++.+.+.....
T Consensus 268 tPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 268 TPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLG 309 (335)
T ss_pred CCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhh
Confidence 999986433 3445553 45889999999999986666554
|
They are found in archaea and some bacteria and have no known function. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.9e-05 Score=97.50 Aligned_cols=182 Identities=10% Similarity=-0.017 Sum_probs=128.3
Q ss_pred CCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCcc------HHHHHHHHHHcCC
Q 001292 407 FLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGY------NDALQEVASRLGL 480 (1106)
Q Consensus 407 L~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY------~eeLkeLaeklGL 480 (1106)
+.++.++|+++.|+.. .|+.++++..+.+|..-. .+...+++ +|++|.+...| ...+.++++...+
T Consensus 474 ldpd~ltigfarRfa~----YKR~~Lil~dl~rl~~il---~~~~~pvQ-~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~ 545 (778)
T cd04299 474 LDPNVLTIGFARRFAT----YKRATLLLRDPERLKRLL---NDPERPVQ-FIFAGKAHPADEPGKELIQEIVEFSRRPEF 545 (778)
T ss_pred cCCCccEEeeeecchh----hhhHHHHHHHHHHHHHHh---hCCCCCeE-EEEEEecCccchHHHHHHHHHHHHHhCcCC
Confidence 4577789999999988 778899999988775321 11113466 68899865332 3366666665556
Q ss_pred CCCcEEEcC-Chh-hHHHHHHHcCeEEEccC--CCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcC----
Q 001292 481 LEHSVRHYG-FNG-DVNGVLLMADIVLYGSS--QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQK---- 552 (1106)
Q Consensus 481 ~d~rV~flG-~~e-DL~~LyaaADVfV~PS~--~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~---- 552 (1106)
.+ +|.|+- +.. -...+++.|||.++||. +| ..|.+=+-||..|.+.+++--|-..|.- ++.||+.+..
T Consensus 546 ~~-kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~E--AsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~ 621 (778)
T cd04299 546 RG-RIVFLEDYDMALARHLVQGVDVWLNTPRRPLE--ASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEY 621 (778)
T ss_pred CC-cEEEEcCCCHHHHHHHHhhhhhcccCCCCCCC--CCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccc
Confidence 65 777765 544 45689999999999999 76 9999999999999999999888888877 7889999987
Q ss_pred --------CCHHHHHHHHHHHHh----C------cccHHHHHHHHHHHHHHHH-HhcHHHHHHHHHH-HHH
Q 001292 553 --------DNPEGLSRAFSLFIS----N------GKLSKFARTVASAGRLHAK-NMLALDCVTRYAR-ILE 603 (1106)
Q Consensus 553 --------~D~eeLAeAI~~LLs----D------pelRk~r~~mGe~Are~ak-e~fsee~v~~Y~e-Lye 603 (1106)
.|.++|.+.|.+-+- + |..+ .+|.+++...+. .+.|..++..|.+ .|.
T Consensus 622 ~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W---~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~ 689 (778)
T cd04299 622 EDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGW---VAMMKHSMATLGPRFSAERMVREYVERFYL 689 (778)
T ss_pred cChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHH---HHHHHHHHHhcccCCCHHHHHHHHHHHhHH
Confidence 456666666644222 3 4433 455555555543 4445666776655 443
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.0024 Score=72.52 Aligned_cols=81 Identities=16% Similarity=0.057 Sum_probs=62.5
Q ss_pred cEEEcCCh-hhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCch------hhhccCCeEEEEcCCCHH
Q 001292 484 SVRHYGFN-GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK------EYVAEGAQVIFFQKDNPE 556 (1106)
Q Consensus 484 rV~flG~~-eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~------EiV~Dg~nG~LV~~~D~e 556 (1106)
+|.+.++. +++..+|..||++|.-+ ...++.||+++|+|+|.....+.. ..+.+...|..++..+.
T Consensus 230 ~v~~~~~~~~~~~~~l~~ad~vI~~~------G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~- 302 (321)
T TIGR00661 230 NVEIRRITTDNFKELIKNAELVITHG------GFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL- 302 (321)
T ss_pred CEEEEECChHHHHHHHHhCCEEEECC------ChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-
Confidence 78888876 58999999999999764 235799999999999998776533 34656567888877777
Q ss_pred HHHHHHHHHHhCccc
Q 001292 557 GLSRAFSLFISNGKL 571 (1106)
Q Consensus 557 eLAeAI~~LLsDpel 571 (1106)
++.+++...++|+..
T Consensus 303 ~~~~~~~~~~~~~~~ 317 (321)
T TIGR00661 303 RLLEAILDIRNMKRY 317 (321)
T ss_pred HHHHHHHhccccccc
Confidence 677777777776653
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00035 Score=80.81 Aligned_cols=249 Identities=17% Similarity=0.140 Sum_probs=126.4
Q ss_pred HHHHHhhccCccEEEEcc-ccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCC----cccccchhhhhhhHHhHHHHHH
Q 001292 274 GQISILGQEQYSLIDWSI-FDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQED----SLANRLPVYVERGFQNLLSYWK 348 (1106)
Q Consensus 274 ~lvkiIr~~~pDiIh~~~-~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna----~Ls~r~~~Y~~~gleklis~~~ 348 (1106)
.+-.++...+||.|-.+. -...+...++... .+||+ .++|+. ....-.. +.....
T Consensus 58 ~~~~~~~~~~Pd~Vlv~GD~~~~la~alaA~~----------~~ipv-~HieaGlRs~d~~~g~~-------de~~R~-- 117 (346)
T PF02350_consen 58 ELADVLEREKPDAVLVLGDRNEALAAALAAFY----------LNIPV-AHIEAGLRSGDRTEGMP-------DEINRH-- 117 (346)
T ss_dssp HHHHHHHHHT-SEEEEETTSHHHHHHHHHHHH----------TT-EE-EEES-----S-TTSSTT-------HHHHHH--
T ss_pred HHHHHHHhcCCCEEEEEcCCchHHHHHHHHHH----------hCCCE-EEecCCCCccccCCCCc-------hhhhhh--
Confidence 356677778999777754 3344555555542 68994 456664 2111111 111111
Q ss_pred HHhccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHH-HHHc-CCCCCcEEEEEEcccCccc
Q 001292 349 SVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQL-RKEN-GFLKDEIVVVVVGSSFFYN 424 (1106)
Q Consensus 349 ~~l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~L-R~~l-GL~~d~~VIL~VGRl~~y~ 424 (1106)
.+=+.+++.++++....+. ..|.++.+|.+++|.++|.. ........... .... ...++.++++..=+...
T Consensus 118 ~i~~la~lhf~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l---~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~-- 192 (346)
T PF02350_consen 118 AIDKLAHLHFAPTEEARERLLQEGEPPERIFVVGNPGIDAL---LQNKEEIEEKYKNSGILQDAPKPYILVTLHPVTN-- 192 (346)
T ss_dssp HHHHH-SEEEESSHHHHHHHHHTT--GGGEEE---HHHHHH---HHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCC--
T ss_pred hhhhhhhhhccCCHHHHHHHHhcCCCCCeEEEEChHHHHHH---HHhHHHHhhhhhhHHHHhccCCCEEEEEeCcchh--
Confidence 1123577888887655544 66888999999999878752 11000000011 1111 11334434433322111
Q ss_pred cc-cCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHc
Q 001292 425 EL-SWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMA 501 (1106)
Q Consensus 425 kg-~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaA 501 (1106)
.. ......+.++++.|.+ . +++.+++.+++.|.. ...+.+...++ + +|.+..+. .++..+++.|
T Consensus 193 ~~~~~~~~~i~~~l~~L~~----~----~~~~vi~~~hn~p~~-~~~i~~~l~~~---~-~v~~~~~l~~~~~l~ll~~a 259 (346)
T PF02350_consen 193 EDNPERLEQILEALKALAE----R----QNVPVIFPLHNNPRG-SDIIIEKLKKY---D-NVRLIEPLGYEEYLSLLKNA 259 (346)
T ss_dssp CTHH--HHHHHHHHHHHHH----H----TTEEEEEE--S-HHH-HHHHHHHHTT----T-TEEEE----HHHHHHHHHHE
T ss_pred cCChHHHHHHHHHHHHHHh----c----CCCcEEEEecCCchH-HHHHHHHhccc---C-CEEEECCCCHHHHHHHHhcc
Confidence 11 1123444444444432 2 455655555544542 45555555533 3 78888855 6889999999
Q ss_pred CeEEEccCCCCCCCcHHHH-HHHHhCCCEEec-CCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 001292 502 DIVLYGSSQVEQGFPSLIV-RAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 570 (1106)
Q Consensus 502 DVfV~PS~~EeEGFGlvLL-EAMA~G~PVIAS-D~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpe 570 (1106)
+++|-=| | .+. ||.++|+|||.- +.+.-.+.+..+.+- ++. .|++++.++|.+++++++
T Consensus 260 ~~vvgdS-------s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nv-lv~-~~~~~I~~ai~~~l~~~~ 320 (346)
T PF02350_consen 260 DLVVGDS-------S-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNV-LVG-TDPEAIIQAIEKALSDKD 320 (346)
T ss_dssp SEEEESS-------H-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEE-EET-SSHHHHHHHHHHHHH-HH
T ss_pred eEEEEcC-------c-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceE-EeC-CCHHHHHHHHHHHHhChH
Confidence 9988443 3 455 999999999998 445556666666554 466 799999999999998744
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0022 Score=72.30 Aligned_cols=274 Identities=14% Similarity=0.088 Sum_probs=155.7
Q ss_pred hhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHHHHHHhH--------------------------HHHHhhccCccEEEE
Q 001292 236 SRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAG--------------------------QISILGQEQYSLIDW 289 (1106)
Q Consensus 236 Gesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i~r~lg~--------------------------lvkiIr~~~pDiIh~ 289 (1106)
+..-+.-+++..|+++|++|.++|-..+...+..+.+|. +.+++...++|+.--
T Consensus 11 ~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~ygf~~~~Igk~g~~tl~~Kl~~~~eR~~~L~ki~~~~kpdv~i~ 90 (346)
T COG1817 11 PHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLYGFPYKSIGKHGGVTLKEKLLESAERVYKLSKIIAEFKPDVAIG 90 (346)
T ss_pred chhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHhCCCeEeecccCCccHHHHHHHHHHHHHHHHHHHhhcCCceEee
Confidence 455677899999999999999999876665555554432 233344444443222
Q ss_pred ccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhh--
Q 001292 290 SIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML-- 367 (1106)
Q Consensus 290 ~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~-- 367 (1106)
- .+.-+.++.. ..++|.|+...+- .....-+.++..|+.++.+.......
T Consensus 91 ~--~s~~l~rvaf-----------gLg~psIi~~D~e---------------hA~~qnkl~~Pla~~ii~P~~~~~~~~~ 142 (346)
T COG1817 91 K--HSPELPRVAF-----------GLGIPSIIFVDNE---------------HAEAQNKLTLPLADVIITPEAIDEEELL 142 (346)
T ss_pred c--CCcchhhHHh-----------hcCCceEEecCCh---------------hHHHHhhcchhhhhheecccccchHHHH
Confidence 0 0111222221 1355655542221 11111124567788999987555433
Q ss_pred hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEE--EcccCccccccCCHHHHHHHHHHhHHHHH
Q 001292 368 YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVV--VGSSFFYNELSWDYAVAMHDVGPLLIKYA 445 (1106)
Q Consensus 368 ~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~--VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~a 445 (1106)
..|.++.++.-.++. ..+.....|.|+ .+.-+++|+.++.+.|++ ...-..|..+.++...+.+.++.+.+
T Consensus 143 ~~G~~p~~i~~~~gi-ae~~~v~~f~pd---~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k--- 215 (346)
T COG1817 143 DFGADPNKISGYNGI-AELANVYGFVPD---PEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK--- 215 (346)
T ss_pred HhCCCccceecccce-eEEeecccCCCC---HHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHh---
Confidence 456565555444432 222111335554 345668999886444432 12122355566666666666655431
Q ss_pred hhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHh
Q 001292 446 RRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTF 525 (1106)
Q Consensus 446 klk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~ 525 (1106)
.- ++++++.. +.++..+ |+. +++.....-|-..++--|++++- +.|.-.-||++.
T Consensus 216 --------~g-iV~ipr~~-----~~~eife--~~~--n~i~pk~~vD~l~Llyya~lvig-------~ggTMarEaAlL 270 (346)
T COG1817 216 --------YG-IVLIPREK-----EQAEIFE--GYR--NIIIPKKAVDTLSLLYYATLVIG-------AGGTMAREAALL 270 (346)
T ss_pred --------Cc-EEEecCch-----hHHHHHh--hhc--cccCCcccccHHHHHhhhheeec-------CCchHHHHHHHh
Confidence 11 35666543 2334444 333 34434445565566667888772 446778899999
Q ss_pred CCCEEecCCC---CchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCccc
Q 001292 526 GIPVITPDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 526 G~PVIASD~g---GI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpel 571 (1106)
|+|.|+..-| ++.+++ -+.|.++...|+.+..+...+++.++.+
T Consensus 271 GtpaIs~~pGkll~vdk~l--ie~G~~~~s~~~~~~~~~a~~~l~~~~~ 317 (346)
T COG1817 271 GTPAISCYPGKLLAVDKYL--IEKGLLYHSTDEIAIVEYAVRNLKYRRL 317 (346)
T ss_pred CCceEEecCCccccccHHH--HhcCceeecCCHHHHHHHHHHHhhchhh
Confidence 9999998633 355555 3478899888988888888888877753
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00061 Score=67.02 Aligned_cols=119 Identities=18% Similarity=0.195 Sum_probs=77.2
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchH-----------------HHHH--HhHHHHHhhccCc
Q 001292 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS-----------------LWEQ--IAGQISILGQEQY 284 (1106)
Q Consensus 224 RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~-----------------i~r~--lg~lvkiIr~~~p 284 (1106)
||+++.... +.++.++++.|++.|++|++++..+..... .... ...+.++++..+|
T Consensus 1 KIl~i~~~~-----~~~~~~~~~~L~~~g~~V~ii~~~~~~~~~~~~~~i~~~~~~~~~k~~~~~~~~~~l~k~ik~~~~ 75 (139)
T PF13477_consen 1 KILLIGNTP-----STFIYNLAKELKKRGYDVHIITPRNDYEKYEIIEGIKVIRLPSPRKSPLNYIKYFRLRKIIKKEKP 75 (139)
T ss_pred CEEEEecCc-----HHHHHHHHHHHHHCCCEEEEEEcCCCchhhhHhCCeEEEEecCCCCccHHHHHHHHHHHHhccCCC
Confidence 456655443 357889999999999999999985542100 1111 1136778888999
Q ss_pred cEEEEccccH-HHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecC
Q 001292 285 SLIDWSIFDG-IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPD 361 (1106)
Q Consensus 285 DiIh~~~~~~-i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S 361 (1106)
|+||+|.... .++..++++.. ..+|+|++.|+........... +.+++. ...++++|.++++|
T Consensus 76 DvIh~h~~~~~~~~~~l~~~~~---------~~~~~i~~~hg~~~~~~~~~~~---~~~~~~--~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 76 DVIHCHTPSPYGLFAMLAKKLL---------KNKKVIYTVHGSDFYNSSKKKK---LKKFII--KFAFKRADKIIVQS 139 (139)
T ss_pred CEEEEecCChHHHHHHHHHHHc---------CCCCEEEEecCCeeecCCchHH---HHHHHH--HHHHHhCCEEEEcC
Confidence 9999999876 56676666431 3389999999865422211100 122222 34678999998875
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0098 Score=66.55 Aligned_cols=280 Identities=14% Similarity=0.116 Sum_probs=147.8
Q ss_pred CEEEEEeCCC-CC-ChhHHHHHHHHHHHHHCCCEEEEEEcCCCC--chHHHHHHhH----HHHHhhccCccEEEE--ccc
Q 001292 223 PRIGLILGNM-AK-DSRSLLLITVVKNLQKLGYVFKIYAVRSGN--SHSLWEQIAG----QISILGQEQYSLIDW--SIF 292 (1106)
Q Consensus 223 ~RIalVlg~L-~~-gGesl~vv~LakaLqe~GyeVtV~t~~dg~--~~~i~r~lg~----lvkiIr~~~pDiIh~--~~~ 292 (1106)
++|++++..- .. .|-......||+.|.+.|..+..++..+.. ....|+.++. .-..|+..++|++.+ ...
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~~~~~f~~~~~~~~n~ik~~k~d~lI~Dsygl 80 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHKVYEGFKVLEGRGNNLIKEEKFDLLIFDSYGL 80 (318)
T ss_pred CcEEEEecCCcccCcchhhhHHHHHHHHHhcCceEEEecccchhhhhhhhhhhccceeeecccccccccCCEEEEeccCC
Confidence 4677776443 33 355667789999999999888888776521 2235544332 223566677775544 444
Q ss_pred cHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhhhcCCC
Q 001292 293 DGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLD 372 (1106)
Q Consensus 293 ~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~~~gi~ 372 (1106)
..-.+..+... .+.|+|+. +...... .. ..|.++-.... ...+.+.-
T Consensus 81 ~~dd~k~ik~e-----------~~~k~l~f--Dd~~~~~-~~------------------d~d~ivN~~~~-a~~~y~~v 127 (318)
T COG3980 81 NADDFKLIKEE-----------AGSKILIF--DDENAKS-FK------------------DNDLIVNAILN-ANDYYGLV 127 (318)
T ss_pred CHHHHHHHHHH-----------hCCcEEEe--cCCCccc-hh------------------hhHhhhhhhhc-chhhcccc
Confidence 44444444421 45666665 2211111 11 11122222212 11222333
Q ss_pred CCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCC
Q 001292 373 AGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEG 452 (1106)
Q Consensus 373 ~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~P 452 (1106)
+.+..+..+.+.-+ ..+ +-..+|+..-..+.+-+++..|...+ | .+.++.++.|.+ ..-
T Consensus 128 ~~k~~~~lGp~y~~-----lr~--eF~~~r~~~~~r~~r~ilI~lGGsDp-----k--~lt~kvl~~L~~-------~~~ 186 (318)
T COG3980 128 PNKTRYYLGPGYAP-----LRP--EFYALREENTERPKRDILITLGGSDP-----K--NLTLKVLAELEQ-------KNV 186 (318)
T ss_pred CcceEEEecCCcee-----ccH--HHHHhHHHHhhcchheEEEEccCCCh-----h--hhHHHHHHHhhc-------cCe
Confidence 33443433322211 111 11222333222233436666664332 2 245555554432 112
Q ss_pred CeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCC--EE
Q 001292 453 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIP--VI 530 (1106)
Q Consensus 453 dikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~P--VI 530 (1106)
+++ +++|..... .+.+.+.+++ .+ ++.+.-..++|.+++..||+.+.. .|.++.||...|+| ||
T Consensus 187 nl~--iV~gs~~p~-l~~l~k~~~~---~~-~i~~~~~~~dma~LMke~d~aI~A-------aGstlyEa~~lgvP~l~l 252 (318)
T COG3980 187 NLH--IVVGSSNPT-LKNLRKRAEK---YP-NINLYIDTNDMAELMKEADLAISA-------AGSTLYEALLLGVPSLVL 252 (318)
T ss_pred eEE--EEecCCCcc-hhHHHHHHhh---CC-CeeeEecchhHHHHHHhcchheec-------cchHHHHHHHhcCCceEE
Confidence 444 677854432 3556666653 33 788888889999999999999854 37899999999999 33
Q ss_pred e--cCCCCchhhhccCCeEEEEcC---CCHHHHHHHHHHHHhCcccH
Q 001292 531 T--PDFPIIKEYVAEGAQVIFFQK---DNPEGLSRAFSLFISNGKLS 572 (1106)
Q Consensus 531 A--SD~gGI~EiV~Dg~nG~LV~~---~D~eeLAeAI~~LLsDpelR 572 (1106)
+ .|.......+.. -|+.... -........+.++.+|+.+|
T Consensus 253 ~~a~NQ~~~a~~f~~--lg~~~~l~~~l~~~~~~~~~~~i~~d~~~r 297 (318)
T COG3980 253 PLAENQIATAKEFEA--LGIIKQLGYHLKDLAKDYEILQIQKDYARR 297 (318)
T ss_pred eeeccHHHHHHHHHh--cCchhhccCCCchHHHHHHHHHhhhCHHHh
Confidence 3 344333333322 2332222 24566777888888888873
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.38 Score=57.68 Aligned_cols=227 Identities=10% Similarity=0.063 Sum_probs=116.6
Q ss_pred CCCcEEEEEcCCc-ccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccc
Q 001292 315 HSIPLVWIIQEDS-LANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEA 391 (1106)
Q Consensus 315 ~gIPVI~tIHna~-Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~ 391 (1106)
.++|+++.-++.+ +.... .+ ...+..++++|.|.+-+....+. ..+++..++.+.+-.-+-+
T Consensus 147 ~gkpv~l~gqsiGPf~~~~--------~r--~l~r~vl~~~~~ItvRD~~S~~~Lk~lGv~~~~v~~~aDpAF~L----- 211 (426)
T PRK10017 147 AKKPLYMIGHSVGPFQDEQ--------FN--QLANYVFGHCDALILRESVSLDLMKRSNITTAKVEHGVDTAWLV----- 211 (426)
T ss_pred cCCCEEEECCcCCCcCCHH--------HH--HHHHHHHhcCCEEEEccHHHHHHHHHhCCCccceEEecChhhhC-----
Confidence 6789888866632 22111 11 11234678999998876544443 4577767777766421211
Q ss_pred cCcch-h---HHHHHHHcCCCCCcEEEEEEcc-cCcccccc-CCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcC---
Q 001292 392 YSKSH-E---KYQLRKENGFLKDEIVVVVVGS-SFFYNELS-WDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN--- 462 (1106)
Q Consensus 392 F~ps~-s---~~~LR~~lGL~~d~~VIL~VGR-l~~y~kg~-Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~--- 462 (1106)
++.. . ...+...++...+..+|++.-| ....++.. .......+.+.++.+.+. .++-++.|+-.+..
T Consensus 212 -~~~~~~~~~~~~~~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li---~~g~~Vv~lp~~~~~~~ 287 (426)
T PRK10017 212 -DHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRII---DEGYQVIALSTCTGIDS 287 (426)
T ss_pred -CccccccccchhhhhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHH---HCCCeEEEEecccCccC
Confidence 1110 0 0111112222223334444323 21111100 011223344444444332 22334433222210
Q ss_pred -CCCccHHHHHHHHHHcCCCCCcEEE-cC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCC----
Q 001292 463 -STDGYNDALQEVASRLGLLEHSVRH-YG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF---- 534 (1106)
Q Consensus 463 -GperY~eeLkeLaeklGL~d~rV~f-lG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~---- 534 (1106)
+++. ....+++.+.+.-+. ++++ .+ ...++..+++.||++| ++.. |.++=|++.|+|+|+-..
T Consensus 288 ~~~dD-~~~~~~l~~~~~~~~-~~~vi~~~~~~~e~~~iIs~~dl~i-g~Rl------Ha~I~a~~~gvP~i~i~Y~~K~ 358 (426)
T PRK10017 288 YNKDD-RMVALNLRQHVSDPA-RYHVVMDELNDLEMGKILGACELTV-GTRL------HSAIISMNFGTPAIAINYEHKS 358 (426)
T ss_pred CCCch-HHHHHHHHHhccccc-ceeEecCCCChHHHHHHHhhCCEEE-Eecc------hHHHHHHHcCCCEEEeeehHHH
Confidence 1221 233456666655433 3443 32 3357889999999977 5455 889999999999998743
Q ss_pred CCchhhhccCCeEEEEcC--CCHHHHHHHHHHHHhCccc
Q 001292 535 PIIKEYVAEGAQVIFFQK--DNPEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 535 gGI~EiV~Dg~nG~LV~~--~D~eeLAeAI~~LLsDpel 571 (1106)
.++-+.+ +...++++. -+.++|.+.+.++++|.+.
T Consensus 359 ~~~~~~l--g~~~~~~~~~~l~~~~Li~~v~~~~~~r~~ 395 (426)
T PRK10017 359 AGIMQQL--GLPEMAIDIRHLLDGSLQAMVADTLGQLPA 395 (426)
T ss_pred HHHHHHc--CCccEEechhhCCHHHHHHHHHHHHhCHHH
Confidence 3344444 323343443 3577899999999998764
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.016 Score=65.91 Aligned_cols=169 Identities=17% Similarity=0.221 Sum_probs=109.6
Q ss_pred cEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcC--CCCccHHHHHHHHHHcCCCCCcEEEc
Q 001292 411 EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN--STDGYNDALQEVASRLGLLEHSVRHY 488 (1106)
Q Consensus 411 ~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~--GperY~eeLkeLaeklGL~d~rV~fl 488 (1106)
..+.+.+|.... ...++..+|+++.+.. +.++++++-.|- |.+.|.+++.+.+.++--.+ ++..+
T Consensus 145 ~~~tIlvGNSgd---~SN~Hie~L~~l~~~~---------~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~-~~~~L 211 (322)
T PRK02797 145 GKMTILVGNSGD---RSNRHIEALRALHQQF---------GDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAE-NFQIL 211 (322)
T ss_pred CceEEEEeCCCC---CcccHHHHHHHHHHHh---------CCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcc-cEEeh
Confidence 346666776443 2457877777775443 256775455555 66778999999998887645 67766
Q ss_pred C---ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec-CCCCchhhhccCCeEEEEcCCCHHHHHHHHHH
Q 001292 489 G---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSL 564 (1106)
Q Consensus 489 G---~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS-D~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~ 564 (1106)
- +.+|...+++.||+.++-.... +|.|+. +=.+.+|+||+.+ +++-..++.+.+ .-++++.++ |-.++.
T Consensus 212 ~e~l~f~eYl~lL~~~Dl~~f~~~RQ-QgiGnl-~lLi~~G~~v~l~r~n~fwqdl~e~g-v~Vlf~~d~---L~~~~v- 284 (322)
T PRK02797 212 TEKLPFDDYLALLRQCDLGYFIFARQ-QGIGTL-CLLIQLGKPVVLSRDNPFWQDLTEQG-LPVLFTGDD---LDEDIV- 284 (322)
T ss_pred hhhCCHHHHHHHHHhCCEEEEeechh-hHHhHH-HHHHHCCCcEEEecCCchHHHHHhCC-CeEEecCCc---ccHHHH-
Confidence 6 4489999999999999987664 577654 5589999999998 556566655444 334454333 211111
Q ss_pred HHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 001292 565 FISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 565 LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk 607 (1106)
++..++++..-++.+. +|.++.++.+.++++....
T Consensus 285 -------~e~~rql~~~dk~~I~-Ff~pn~~~~W~~~l~~~~g 319 (322)
T PRK02797 285 -------REAQRQLASVDKNIIA-FFSPNYLQGWRNALAIAAG 319 (322)
T ss_pred -------HHHHHHHHhhCcceee-ecCHhHHHHHHHHHHHhhC
Confidence 0112334445445554 7778888899999987654
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0067 Score=70.48 Aligned_cols=50 Identities=20% Similarity=0.266 Sum_probs=36.5
Q ss_pred HHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec
Q 001292 469 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1106)
Q Consensus 469 eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS 532 (1106)
+.+++...+. . .+.+.+ +..++|+.||+++..| |.+.+|++.+|+|.|..
T Consensus 211 ~~i~~~~~~~--~--~~~~~~---~~~~~m~~aDlal~~S-------GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 211 KDLKEIYGDI--S--EFEISY---DTHKALLEAEFAFICS-------GTATLEAALIGTPFVLA 260 (347)
T ss_pred HHHHHHHhcC--C--CcEEec---cHHHHHHhhhHHHhcC-------cHHHHHHHHhCCCEEEE
Confidence 5566655432 2 344443 5678999999999776 67777999999999985
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.023 Score=67.42 Aligned_cols=86 Identities=21% Similarity=0.204 Sum_probs=69.1
Q ss_pred CCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhccCCeEEEEc--C
Q 001292 479 GLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAEGAQVIFFQ--K 552 (1106)
Q Consensus 479 GL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~Dg~nG~LV~--~ 552 (1106)
++++ ++...++. ....++..||++|.. |.-.++.||+.+|+|+|+- |.....+.+++-..|...+ .
T Consensus 281 ~~p~-n~~v~~~~-p~~~~l~~ad~vI~h------GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~ 352 (406)
T COG1819 281 NVPD-NVIVADYV-PQLELLPRADAVIHH------GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEE 352 (406)
T ss_pred cCCC-ceEEecCC-CHHHHhhhcCEEEec------CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCccc
Confidence 5665 78888865 344599999999976 4457899999999999986 4445667777777898777 5
Q ss_pred CCHHHHHHHHHHHHhCcccH
Q 001292 553 DNPEGLSRAFSLFISNGKLS 572 (1106)
Q Consensus 553 ~D~eeLAeAI~~LLsDpelR 572 (1106)
.+++.|+++|.++++|+..+
T Consensus 353 l~~~~l~~av~~vL~~~~~~ 372 (406)
T COG1819 353 LTEERLRAAVNEVLADDSYR 372 (406)
T ss_pred CCHHHHHHHHHHHhcCHHHH
Confidence 78999999999999999873
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0051 Score=71.09 Aligned_cols=227 Identities=14% Similarity=0.073 Sum_probs=110.2
Q ss_pred CCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhh---hcCCCCCCEEEeCCCCCCccccc
Q 001292 314 FHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVE 390 (1106)
Q Consensus 314 ~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e 390 (1106)
..+.++|.+.|+.++..-....... ..............|.+++.+...... ..+++.+++.+++..-.|.
T Consensus 97 ~~~~~~i~lwHG~~~K~~g~~~~~~--~~~~~~~~~~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~---- 170 (369)
T PF04464_consen 97 RKNQKYIQLWHGIPLKKIGYDSPDN--KNYRKNYKRNYRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRNDY---- 170 (369)
T ss_dssp -TTSEEEE--SS--SB--GGG-S-----TS-HHHHHHHTT-SEEEESSHHHHHHHHHHTT--GGGEEES--GGGHH----
T ss_pred CCCcEEEEecCCCcccccchhcccc--ccchhhhhhhccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCCeEhH----
Confidence 3567899999998655422111000 000112334567889999998765554 3466777787776544453
Q ss_pred ccCcch-hHHHHHHHcCCCCCcEEEEEEcccCccccc--cCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCcc
Q 001292 391 AYSKSH-EKYQLRKENGFLKDEIVVVVVGSSFFYNEL--SWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGY 467 (1106)
Q Consensus 391 ~F~ps~-s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg--~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY 467 (1106)
.+.... ....+++.++++.++.+|+++-........ .+.....++ +..|. .+. .+++. +++--||..
T Consensus 171 l~~~~~~~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~-~~~l~----~~~--~~~~~--li~k~Hp~~- 240 (369)
T PF04464_consen 171 LFNKSKENRNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKFFFSDLD-FEKLN----FLL--KNNYV--LIIKPHPNM- 240 (369)
T ss_dssp HHHSTT-HHHHHHHHTT--SS-EEEEEE----GGG--GGSS----TT--HHHHH----HHH--TTTEE--EEE--SHHH-
T ss_pred HhccCHHHHHHHHHHhccCCCCcEEEEeeccccccccccccccccccC-HHHHH----HHh--CCCcE--EEEEeCchh-
Confidence 333322 246778889999898899998532211100 001111111 11221 011 14553 455556531
Q ss_pred HHHHHHHHHH-cCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec--CCCC-------c
Q 001292 468 NDALQEVASR-LGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP--DFPI-------I 537 (1106)
Q Consensus 468 ~eeLkeLaek-lGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS--D~gG-------I 537 (1106)
...... ....+ +|.+.....++.+++..||++|. -++-++.|++.+++|||.. |... .
T Consensus 241 ----~~~~~~~~~~~~-~i~~~~~~~~~~~ll~~aDiLIT-------DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~ 308 (369)
T PF04464_consen 241 ----KKKFKDFKEDNS-NIIFVSDNEDIYDLLAAADILIT-------DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFY 308 (369)
T ss_dssp ----HTT----TT-TT-TEEE-TT-S-HHHHHHT-SEEEE-------SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBS
T ss_pred ----hhchhhhhccCC-cEEECCCCCCHHHHHHhcCEEEE-------echhHHHHHHHhCCCEEEEeccHHHHhhccCCC
Confidence 111111 23344 89888877799999999999883 3457899999999999954 4321 1
Q ss_pred hhhhccCCeEEEEcCCCHHHHHHHHHHHHhCccc
Q 001292 538 KEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 538 ~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpel 571 (1106)
.+ ..+...|..+ .+.++|.++|..+++++..
T Consensus 309 ~~-~~~~~pg~~~--~~~~eL~~~i~~~~~~~~~ 339 (369)
T PF04464_consen 309 FD-YEEDLPGPIV--YNFEELIEAIENIIENPDE 339 (369)
T ss_dssp S--TTTSSSS-EE--SSHHHHHHHHTTHHHHHHH
T ss_pred Cc-hHhhCCCcee--CCHHHHHHHHHhhhhCCHH
Confidence 22 2222345555 5899999999999887654
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.00013 Score=74.88 Aligned_cols=105 Identities=21% Similarity=0.349 Sum_probs=67.2
Q ss_pred EEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCC
Q 001292 455 KFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF 534 (1106)
Q Consensus 455 kfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~ 534 (1106)
++++++|.... +....... +... +|.+.++.+++..+|+.||++|.- +++.++.|++++|+|.|.-..
T Consensus 33 ~viv~~G~~~~---~~~~~~~~--~~~~-~v~~~~~~~~m~~~m~~aDlvIs~------aG~~Ti~E~l~~g~P~I~ip~ 100 (167)
T PF04101_consen 33 QVIVQTGKNNY---EELKIKVE--NFNP-NVKVFGFVDNMAELMAAADLVISH------AGAGTIAEALALGKPAIVIPL 100 (167)
T ss_dssp CCCCCCTTCEC---HHHCCCHC--CTTC-CCEEECSSSSHHHHHHHHSEEEEC------S-CHHHHHHHHCT--EEEE--
T ss_pred EEEEEECCCcH---HHHHHHHh--ccCC-cEEEEechhhHHHHHHHcCEEEeC------CCccHHHHHHHcCCCeeccCC
Confidence 44567777632 23322222 2223 799999999999999999998843 557899999999999987655
Q ss_pred CC--------chhhhccCCeEEEEcC--CCHHHHHHHHHHHHhCccc
Q 001292 535 PI--------IKEYVAEGAQVIFFQK--DNPEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 535 gG--------I~EiV~Dg~nG~LV~~--~D~eeLAeAI~~LLsDpel 571 (1106)
+. ....+.....|..+.. .+++.|.++|..+++++..
T Consensus 101 ~~~~~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~~~ 147 (167)
T PF04101_consen 101 PGAADNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLSDPEK 147 (167)
T ss_dssp TTT-T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCCHH-
T ss_pred CCcchHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcCcHH
Confidence 54 2333433333433322 3467899999999998876
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.23 Score=57.47 Aligned_cols=304 Identities=10% Similarity=0.039 Sum_probs=160.1
Q ss_pred CCEEEEEeCCCCCChhHHHHHHHHHHHHHC--CCEEEEEEcCCCC--c-------------------------------h
Q 001292 222 PPRIGLILGNMAKDSRSLLLITVVKNLQKL--GYVFKIYAVRSGN--S-------------------------------H 266 (1106)
Q Consensus 222 ~~RIalVlg~L~~gGesl~vv~LakaLqe~--GyeVtV~t~~dg~--~-------------------------------~ 266 (1106)
.+||+|++.++..=|--.-...+|.+|.+. |.+|.+++..+-. + +
T Consensus 9 ~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~~~gVd~V~LPsl~k~~~G~~~~~d~~~~l~ 88 (400)
T COG4671 9 RPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPGPAGVDFVKLPSLIKGDNGEYGLVDLDGDLE 88 (400)
T ss_pred cceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCCcccCceEecCceEecCCCceeeeecCCCHH
Confidence 459999999988878778888999999998 9999999863210 0 0
Q ss_pred HHHH-HHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcC--CcccccchhhhhhhHHhH
Q 001292 267 SLWE-QIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQE--DSLANRLPVYVERGFQNL 343 (1106)
Q Consensus 267 ~i~r-~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHn--a~Ls~r~~~Y~~~glekl 343 (1106)
...+ ....++..+..++||++..-.+...+..-+.+-. .-+++. +.+.+....+ +...........
T Consensus 89 e~~~~Rs~lil~t~~~fkPDi~IVd~~P~Glr~EL~ptL--~yl~~~---~t~~vL~lr~i~D~p~~~~~~w~~------ 157 (400)
T COG4671 89 ETKKLRSQLILSTAETFKPDIFIVDKFPFGLRFELLPTL--EYLKTT---GTRLVLGLRSIRDIPQELEADWRR------ 157 (400)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeccccchhhhhhHHH--HHHhhc---CCcceeehHhhhhchhhhccchhh------
Confidence 0000 0112566677789998877655554544444422 123333 2333333222 100000000000
Q ss_pred HHHHHHHhccccEEEecC-CChhhhhcC--CC---CCCEEEeCCCCCCccccc-ccCcchhHHHHHHHcCCCCCcEEEEE
Q 001292 344 LSYWKSVFSRVNVIVFPD-YTLPMLYSV--LD---AGNFFVIPGSPADVWAVE-AYSKSHEKYQLRKENGFLKDEIVVVV 416 (1106)
Q Consensus 344 is~~~~~l~~AD~VIa~S-~~~~~~~~g--i~---~~KI~VIpN~GVDl~~~e-~F~ps~s~~~LR~~lGL~~d~~VIL~ 416 (1106)
......+-+.-|.|.+.- ....+...+ +. ..|+..++- + . .. ...+.+. ..+ +++..+++.
T Consensus 158 ~~~~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~--v-q--~~~~~~~~p~------~~~-pE~~~Ilvs 225 (400)
T COG4671 158 AETVRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGF--V-Q--RSLPHLPLPP------HEA-PEGFDILVS 225 (400)
T ss_pred hHHHHHHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEE--e-e--ccCcCCCCCC------cCC-CccceEEEe
Confidence 011112223456665532 222222111 11 233433321 1 0 00 0000000 001 345667777
Q ss_pred EcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcC-CCCccHHHHHHHHHHcCCCCCcEEEcCChhhHH
Q 001292 417 VGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN-STDGYNDALQEVASRLGLLEHSVRHYGFNGDVN 495 (1106)
Q Consensus 417 VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~-GperY~eeLkeLaeklGL~d~rV~flG~~eDL~ 495 (1106)
+| +|.-|.+++-.++.... ....-.+. .+++.|. -|+ +..+++.....-.+ +|.+.-+..++.
T Consensus 226 ~G------GG~dG~eLi~~~l~A~~----~l~~l~~~--~~ivtGP~MP~---~~r~~l~~~A~~~p-~i~I~~f~~~~~ 289 (400)
T COG4671 226 VG------GGADGAELIETALAAAQ----LLAGLNHK--WLIVTGPFMPE---AQRQKLLASAPKRP-HISIFEFRNDFE 289 (400)
T ss_pred cC------CChhhHHHHHHHHHHhh----hCCCCCcc--eEEEeCCCCCH---HHHHHHHHhcccCC-CeEEEEhhhhHH
Confidence 77 34556665555443221 11111122 3566665 343 44444444333333 799999999999
Q ss_pred HHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCch-hhhcc-------CCeEEEEcC-CCHHHHHHHHHHHH
Q 001292 496 GVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK-EYVAE-------GAQVIFFQK-DNPEGLSRAFSLFI 566 (1106)
Q Consensus 496 ~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~-EiV~D-------g~nG~LV~~-~D~eeLAeAI~~LL 566 (1106)
.|++.|+.+|.-+-+ +++.|-+++|||.+.-.....+ |.+.- |-...|.+. -+++.||++|..++
T Consensus 290 ~ll~gA~~vVSm~GY------NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l 363 (400)
T COG4671 290 SLLAGARLVVSMGGY------NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAAL 363 (400)
T ss_pred HHHHhhheeeecccc------hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcc
Confidence 999999999965444 7899999999998876544322 22211 223334332 35889999999998
Q ss_pred hCcc
Q 001292 567 SNGK 570 (1106)
Q Consensus 567 sDpe 570 (1106)
+-|.
T Consensus 364 ~~P~ 367 (400)
T COG4671 364 ARPS 367 (400)
T ss_pred cCCC
Confidence 8554
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=96.73 E-value=1.5 Score=51.12 Aligned_cols=165 Identities=13% Similarity=0.101 Sum_probs=102.1
Q ss_pred cEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCC--CccHHHHHHHHHHcCCCCCcEEEc
Q 001292 411 EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNST--DGYNDALQEVASRLGLLEHSVRHY 488 (1106)
Q Consensus 411 ~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gp--erY~eeLkeLaeklGL~d~rV~fl 488 (1106)
..+-+.+|.... ...++..+++++++.. +.++++++-.|-|. +.|.+++.+.++++--.+ +|..+
T Consensus 184 ~~ltILvGNSgd---~sNnHieaL~~L~~~~---------~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~-~~~iL 250 (360)
T PF07429_consen 184 GKLTILVGNSGD---PSNNHIEALEALKQQF---------GDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAE-NFQIL 250 (360)
T ss_pred CceEEEEcCCCC---CCccHHHHHHHHHHhc---------CCCeEEEEECCCCCchHHHHHHHHHHHHHhcCcc-ceeEh
Confidence 345666665443 2446877777664422 24566444444443 458888888888775443 67665
Q ss_pred C---ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcC--CCHHHHHHHHH
Q 001292 489 G---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQK--DNPEGLSRAFS 563 (1106)
Q Consensus 489 G---~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~--~D~eeLAeAI~ 563 (1106)
- +.+|..++++.||++++..... +|.|+ ++=.+.+|+||+.+...-.-..+.+..--+++.. -|...++++=.
T Consensus 251 ~e~mpf~eYl~lL~~cDl~if~~~RQ-QgiGn-I~lLl~~G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~r 328 (360)
T PF07429_consen 251 TEFMPFDEYLALLSRCDLGIFNHNRQ-QGIGN-ICLLLQLGKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQR 328 (360)
T ss_pred hhhCCHHHHHHHHHhCCEEEEeechh-hhHhH-HHHHHHcCCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHH
Confidence 4 4489999999999999998775 56665 5568999999999865555555544433344432 24455555544
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHH
Q 001292 564 LFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILEN 604 (1106)
Q Consensus 564 ~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyes 604 (1106)
++..-... ...+|..+..+.+...+.-
T Consensus 329 ql~~~dk~--------------~iaFf~pny~~~w~~~l~~ 355 (360)
T PF07429_consen 329 QLANVDKQ--------------QIAFFAPNYLQGWRQALRL 355 (360)
T ss_pred HHhhCccc--------------ceeeeCCchHHHHHHHHHH
Confidence 44332211 1136667777777776654
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.062 Score=65.58 Aligned_cols=86 Identities=15% Similarity=-0.028 Sum_probs=63.9
Q ss_pred CCCCCcEEEcCChhhHHHHH--HHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecC----CCCchhhhccCCeEEEEcC
Q 001292 479 GLLEHSVRHYGFNGDVNGVL--LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD----FPIIKEYVAEGAQVIFFQK 552 (1106)
Q Consensus 479 GL~d~rV~flG~~eDL~~Ly--aaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD----~gGI~EiV~Dg~nG~LV~~ 552 (1106)
++++ +|.+.+... -..+| ..+++||.- |+..++.||+.+|+|+|+-. .......+.....|..++.
T Consensus 343 ~~p~-Nv~i~~w~P-q~~lL~hp~v~~fItH------GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~ 414 (507)
T PHA03392 343 NLPA-NVLTQKWFP-QRAVLKHKNVKAFVTQ------GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDT 414 (507)
T ss_pred cCCC-ceEEecCCC-HHHHhcCCCCCEEEec------CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEecc
Confidence 4555 899998653 34566 458888843 56789999999999999864 3345555655567877765
Q ss_pred C--CHHHHHHHHHHHHhCcccH
Q 001292 553 D--NPEGLSRAFSLFISNGKLS 572 (1106)
Q Consensus 553 ~--D~eeLAeAI~~LLsDpelR 572 (1106)
. ++++|.++|.++++|+..+
T Consensus 415 ~~~t~~~l~~ai~~vl~~~~y~ 436 (507)
T PHA03392 415 VTVSAAQLVLAIVDVIENPKYR 436 (507)
T ss_pred CCcCHHHHHHHHHHHhCCHHHH
Confidence 3 6789999999999998873
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.13 Score=60.66 Aligned_cols=73 Identities=15% Similarity=0.204 Sum_probs=54.4
Q ss_pred hHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCch----hhhccC-CeEEEE-cC--C----CHHHHHH
Q 001292 493 DVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK----EYVAEG-AQVIFF-QK--D----NPEGLSR 560 (1106)
Q Consensus 493 DL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~----EiV~Dg-~nG~LV-~~--~----D~eeLAe 560 (1106)
|..++...|.+.|+||.+| +.|.++.|.-.+|+|-|++|..|.. |.|.+. ..|+.+ +. . +.++|++
T Consensus 493 DYeeFVRGCHLGVFPSYYE--PWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~ 570 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYE--PWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLAS 570 (692)
T ss_pred CHHHHhccccccccccccC--CCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHH
Confidence 6789999999999999998 9999999999999999999998865 555443 356544 21 2 3445555
Q ss_pred HHHHHHh
Q 001292 561 AFSLFIS 567 (1106)
Q Consensus 561 AI~~LLs 567 (1106)
-+.....
T Consensus 571 ~m~~F~~ 577 (692)
T KOG3742|consen 571 FMYEFCK 577 (692)
T ss_pred HHHHHHH
Confidence 5554443
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.27 Score=56.56 Aligned_cols=241 Identities=17% Similarity=0.121 Sum_probs=130.9
Q ss_pred hhHHHHHHHHHHHHHC-CCEEEEEEcCCCC------ch-HHHHHHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhh
Q 001292 236 SRSLLLITVVKNLQKL-GYVFKIYAVRSGN------SH-SLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAIS 307 (1106)
Q Consensus 236 Gesl~vv~LakaLqe~-GyeVtV~t~~dg~------~~-~i~r~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~id 307 (1106)
|...+..-|+++|... +++|..+....-. .. ..+.........+....+|+|....-.+..+....++..
T Consensus 2 Gh~~Q~~GLa~aL~~~~~~~~~~v~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~pdLiIsaGr~t~~~~~~l~r~~-- 79 (311)
T PF06258_consen 2 GHENQSLGLAEALGRLTPYEIKRVDVRRPWRWLPRLLPAPLRALLKPFSPALEPPWPDLIISAGRRTAPAALALRRAS-- 79 (311)
T ss_pred chHHHHHHHHHHhcCccCcceeEeccccchhhccccccchHHHhhhcccccccCCCCcEEEECCCchHHHHHHHHHHc--
Confidence 5566788899998884 8888777665410 00 011111111223334568888887777777766666542
Q ss_pred hcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhhhcCC-CCCCEEEeCCCCCCc
Q 001292 308 SLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVL-DAGNFFVIPGSPADV 386 (1106)
Q Consensus 308 II~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~~~gi-~~~KI~VIpN~GVDl 386 (1106)
..++++|+..+=. . -....|.||++.... . ...++..+.+. .+
T Consensus 80 ------gg~~~~V~i~~P~-----~-----------------~~~~FDlvi~p~HD~------~~~~~Nvl~t~ga-~~- 123 (311)
T PF06258_consen 80 ------GGRTKTVQIMDPR-----L-----------------PPRPFDLVIVPEHDR------LPRGPNVLPTLGA-PN- 123 (311)
T ss_pred ------CCCceEEEEcCCC-----C-----------------CccccCEEEECcccC------cCCCCceEecccC-CC-
Confidence 1234666652211 0 024678888876542 2 34466665542 22
Q ss_pred ccccccCcc---hhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHH---HHHHHHHHhHHHHHhhccCCCCeEEEEEE
Q 001292 387 WAVEAYSKS---HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA---VAMHDVGPLLIKYARRNSVEGSFKFVFLC 460 (1106)
Q Consensus 387 ~~~e~F~ps---~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~d---lLLeA~k~Ll~k~aklk~~~PdikfLIIV 460 (1106)
.+.+. ..+..+...++-.+...+.+.||.-...+ .-+.+ .+++.+..+.+. .+ .. +.|.
T Consensus 124 ----~i~~~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~--~~~~~~~~~l~~~l~~~~~~-------~~-~~-~~vt 188 (311)
T PF06258_consen 124 ----RITPERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHY--RWDEEDAERLLDQLAALAAA-------YG-GS-LLVT 188 (311)
T ss_pred ----cCCHHHHHHHHHhhhhhhccCCCCeEEEEECcCCCCc--ccCHHHHHHHHHHHHHHHHh-------CC-Ce-EEEE
Confidence 22222 12334445555445566777777533211 22344 344444333321 12 34 3444
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcE-EEcCCh-hhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCC
Q 001292 461 GNSTDGYNDALQEVASRLGLLEHSV-RHYGFN-GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI 536 (1106)
Q Consensus 461 G~GperY~eeLkeLaeklGL~d~rV-~flG~~-eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gG 536 (1106)
..--.. .+....+.+.++-.. .| .+-+.- +-+..+|+.||.+|++..+. .-+-||++.|+||.+-..++
T Consensus 189 tSRRTp-~~~~~~L~~~~~~~~-~~~~~~~~~~nPy~~~La~ad~i~VT~DSv-----SMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 189 TSRRTP-PEAEAALRELLKDNP-GVYIWDGTGENPYLGFLAAADAIVVTEDSV-----SMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred cCCCCc-HHHHHHHHHhhcCCC-ceEEecCCCCCcHHHHHHhCCEEEEcCccH-----HHHHHHHHcCCCEEEecCCC
Confidence 432211 133334444333333 56 443322 34889999999999997665 56789999999999987776
|
The function of this family is unknown. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.025 Score=60.31 Aligned_cols=149 Identities=11% Similarity=0.008 Sum_probs=87.3
Q ss_pred EEEEEeCCC---CCChhHHHHHHHHHHHHHCCCEEEEEEcCCCC--chHHH--------------------HHHhHHHHH
Q 001292 224 RIGLILGNM---AKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN--SHSLW--------------------EQIAGQISI 278 (1106)
Q Consensus 224 RIalVlg~L---~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~--~~~i~--------------------r~lg~lvki 278 (1106)
+|+++-..= ..||-+.++-.|+..|.++|++|+|+|..+.. ....+ -.+..+...
T Consensus 3 kIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~~a 82 (185)
T PF09314_consen 3 KIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPAPKNGSAESIIYDFLSLLHA 82 (185)
T ss_pred eEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCCCCCCchHHHHHHHHHHHHH
Confidence 455553331 23899999999999999999999999985422 11111 111112222
Q ss_pred h---hc--cCccEEEEcccc-HHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccc--ccchhhhhhhHHhHHHHHHHH
Q 001292 279 L---GQ--EQYSLIDWSIFD-GIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLA--NRLPVYVERGFQNLLSYWKSV 350 (1106)
Q Consensus 279 I---r~--~~pDiIh~~~~~-~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls--~r~~~Y~~~gleklis~~~~~ 350 (1106)
+ +. .+.++++.+.+. +.++..+.++.. ..++|+++++|+-... +|... ...+-++.+ ..+
T Consensus 83 l~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~--------~~g~~v~vN~DGlEWkR~KW~~~--~k~~lk~~E--~~a 150 (185)
T PF09314_consen 83 LRFIKQDKIKYDIILILGYGIGPFFLPFLRKLR--------KKGGKVVVNMDGLEWKRAKWGRP--AKKYLKFSE--KLA 150 (185)
T ss_pred HHHHhhccccCCEEEEEcCCccHHHHHHHHhhh--------hcCCcEEECCCcchhhhhhcCHH--HHHHHHHHH--HHH
Confidence 2 22 256789988877 555554544322 2577999998884322 22211 101111111 134
Q ss_pred hccccEEEecCCChhhhh-cCCCCCCEEEeCCCCCC
Q 001292 351 FSRVNVIVFPDYTLPMLY-SVLDAGNFFVIPGSPAD 385 (1106)
Q Consensus 351 l~~AD~VIa~S~~~~~~~-~gi~~~KI~VIpN~GVD 385 (1106)
.+.+|.+|+.|....+.. ......+..+|++ |.|
T Consensus 151 vk~ad~lIaDs~~I~~y~~~~y~~~~s~~IaY-Gad 185 (185)
T PF09314_consen 151 VKYADRLIADSKGIQDYIKERYGRKKSTFIAY-GAD 185 (185)
T ss_pred HHhCCEEEEcCHHHHHHHHHHcCCCCcEEecC-CCC
Confidence 678999999998877762 2333356788886 544
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.1 Score=60.67 Aligned_cols=117 Identities=11% Similarity=0.184 Sum_probs=88.9
Q ss_pred cEEEcC---ChhhHHHHHHHcCeEEEccC--CCCCCC--cHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHH
Q 001292 484 SVRHYG---FNGDVNGVLLMADIVLYGSS--QVEQGF--PSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPE 556 (1106)
Q Consensus 484 rV~flG---~~eDL~~LyaaADVfV~PS~--~EeEGF--GlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~e 556 (1106)
++..+| ....+..++..-|+++.-++ .+..++ .+-+.|+|+||.|.|+....++...+.+|+.-++. .|..
T Consensus 238 ~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~--~d~k 315 (373)
T COG4641 238 NVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVY--QDSK 315 (373)
T ss_pred hhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEe--cCHH
Confidence 455555 33678889999999885432 221123 78899999999999999999999999888775554 6899
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH-HHHHHHHHHHHHHH
Q 001292 557 GLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA-LDCVTRYARILENV 605 (1106)
Q Consensus 557 eLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fs-ee~v~~Y~eLyesl 605 (1106)
++.+.+..++..++. ++++++.|++.+...+. .+-+..+...+.++
T Consensus 316 dl~~~~~yll~h~~e---rkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI 362 (373)
T COG4641 316 DLKEKLKYLLNHPDE---RKEIAECAYERVLARHTYEERIFKLLNEIASI 362 (373)
T ss_pred HHHHHHHHHhcCcch---HHHHHHhhHHHHHHhccHHHHHHHHHHHHHHH
Confidence 999999999999987 68999999999888766 33344555555543
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.16 Score=61.14 Aligned_cols=94 Identities=6% Similarity=-0.022 Sum_probs=63.7
Q ss_pred cEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhccC-CeEEEEcCCCHHHH
Q 001292 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAEG-AQVIFFQKDNPEGL 558 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~Dg-~nG~LV~~~D~eeL 558 (1106)
++.+.+.. .-..+|+..++..+-+. ++-++++||+.+|+|+|+- |.......+.+. ..|+-+...+.+++
T Consensus 329 ~~~v~~w~-PQ~~iL~h~~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l 403 (448)
T PLN02562 329 QGKVVSWA-PQLEVLKHQAVGCYLTH----CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEV 403 (448)
T ss_pred CEEEEecC-CHHHHhCCCccceEEec----CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHH
Confidence 67777744 33456766665333332 5568999999999999986 455566666542 45665544578999
Q ss_pred HHHHHHHHhCcccHHHHHHHHHHH
Q 001292 559 SRAFSLFISNGKLSKFARTVASAG 582 (1106)
Q Consensus 559 AeAI~~LLsDpelRk~r~~mGe~A 582 (1106)
+++|.+++.+++.++.++++++.+
T Consensus 404 ~~~v~~~l~~~~~r~~a~~l~~~~ 427 (448)
T PLN02562 404 EEGLRKVMEDSGMGERLMKLRERA 427 (448)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999999887755455554443
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.1 Score=62.86 Aligned_cols=98 Identities=10% Similarity=0.066 Sum_probs=67.8
Q ss_pred cEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhcc-CCeEEEEcC-----C
Q 001292 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAE-GAQVIFFQK-----D 553 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~D-g~nG~LV~~-----~ 553 (1106)
++++.+.... ..+|+.+++..+-+. +.-++++||+++|+|+|+- |.......+.+ -..|+.++. -
T Consensus 335 g~~v~~W~PQ-~~iL~H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~ 409 (451)
T PLN03004 335 GMVVKSWAPQ-VPVLNHKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFV 409 (451)
T ss_pred cEEEEeeCCH-HHHhCCCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCcc
Confidence 5777674422 337888888443332 5568999999999999986 45556666643 357776642 3
Q ss_pred CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH
Q 001292 554 NPEGLSRAFSLFISNGKLSKFARTVASAGRLHA 586 (1106)
Q Consensus 554 D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~a 586 (1106)
+.++++++|.++++++..+..+.++.+.+++-+
T Consensus 410 ~~e~l~~av~~vm~~~~~r~~a~~~~~~a~~Av 442 (451)
T PLN03004 410 SSTEVEKRVQEIIGECPVRERTMAMKNAAELAL 442 (451)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Confidence 789999999999998877655555555555443
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.43 Score=57.93 Aligned_cols=114 Identities=11% Similarity=0.047 Sum_probs=69.5
Q ss_pred cEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhcc-CCeEEEE--------
Q 001292 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAE-GAQVIFF-------- 550 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~D-g~nG~LV-------- 550 (1106)
+|++.+.... ..+|+.+++-.+-+. +.-++++||+++|+|+|+- |.......+.+ -+.|+-+
T Consensus 346 g~~v~~w~PQ-~~iL~h~~v~~fvtH----~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 420 (482)
T PLN03007 346 GLIIRGWAPQ-VLILDHQATGGFVTH----CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKV 420 (482)
T ss_pred CEEEecCCCH-HHHhccCccceeeec----CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecccccccc
Confidence 6777775533 467788877333322 5568999999999999986 33334443321 1233332
Q ss_pred --cCCCHHHHHHHHHHHHhCc---ccHHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHH
Q 001292 551 --QKDNPEGLSRAFSLFISNG---KLSKFARTVASAGRLHAKNM-LALDCVTRYARIL 602 (1106)
Q Consensus 551 --~~~D~eeLAeAI~~LLsDp---elRk~r~~mGe~Are~ake~-fsee~v~~Y~eLy 602 (1106)
..-+.++++++|.+++.++ +.|+.++++.+.+++-+.+- ++...++.+.+.+
T Consensus 421 ~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~ 478 (482)
T PLN03007 421 KGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEEL 478 (482)
T ss_pred ccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 1237889999999999987 55555566666665555442 2344444444433
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.18 Score=61.38 Aligned_cols=193 Identities=11% Similarity=0.086 Sum_probs=114.6
Q ss_pred HHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCC
Q 001292 401 LRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGL 480 (1106)
Q Consensus 401 LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL 480 (1106)
.|.++++++|.+++..+-.+. |=-...++.+..++... |+-. |++.--.... ...++..++++|+
T Consensus 749 ~r~~y~Lp~d~vvf~~FNqLy------KidP~~l~~W~~ILk~V-------PnS~-LwllrfPa~g-e~rf~ty~~~~Gl 813 (966)
T KOG4626|consen 749 TRSQYGLPEDAVVFCNFNQLY------KIDPSTLQMWANILKRV-------PNSV-LWLLRFPAVG-EQRFRTYAEQLGL 813 (966)
T ss_pred CCCCCCCCCCeEEEeechhhh------cCCHHHHHHHHHHHHhC-------Ccce-eEEEeccccc-hHHHHHHHHHhCC
Confidence 577899998887777665433 23356777887777544 6654 3333221110 1678999999999
Q ss_pred CCCcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCch-----hhhccCCeEEEEcCC
Q 001292 481 LEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK-----EYVAEGAQVIFFQKD 553 (1106)
Q Consensus 481 ~d~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~-----EiV~Dg~nG~LV~~~ 553 (1106)
+..+|+|.. ..+|-..-+..+||++=+.... +-.+-.|.+-+|+|+|+-...... ..+..-..|-++- .
T Consensus 814 ~p~riifs~va~k~eHvrr~~LaDv~LDTplcn---GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia-k 889 (966)
T KOG4626|consen 814 EPDRIIFSPVAAKEEHVRRGQLADVCLDTPLCN---GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA-K 889 (966)
T ss_pred CccceeeccccchHHHHHhhhhhhhcccCcCcC---CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh-h
Confidence 888999998 3366677788999988654443 223457888999999975332211 1221112333332 5
Q ss_pred CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH--HHHhcH-HHHHHHHHHHHHHHhcCCCCCCCC
Q 001292 554 NPEGLSRAFSLFISNGKLSKFARTVASAGRLH--AKNMLA-LDCVTRYARILENVLNFPSDALLP 615 (1106)
Q Consensus 554 D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~--ake~fs-ee~v~~Y~eLyeslLk~Ps~a~~P 615 (1106)
+.+++.+.-.+|-.|.+. .+++...-+.. ....|. ...+..++++|-++-+.-.....|
T Consensus 890 ~~eEY~~iaV~Latd~~~---L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~y~~G~~p 951 (966)
T KOG4626|consen 890 NREEYVQIAVRLATDKEY---LKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKKYCSGEVP 951 (966)
T ss_pred hHHHHHHHHHHhhcCHHH---HHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHHhccCCCC
Confidence 788898888888888765 33332222211 111222 233346666666665543333333
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.11 Score=62.44 Aligned_cols=83 Identities=19% Similarity=0.226 Sum_probs=55.5
Q ss_pred cEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCC----CCchhhhccCCeEEEEcCC--CHHH
Q 001292 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYVAEGAQVIFFQKD--NPEG 557 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~----gGI~EiV~Dg~nG~LV~~~--D~ee 557 (1106)
+|.+...... .++|+...+-++=+. |+-++++||+.+|+|+|+-.. ......+.+...|...+.. +.++
T Consensus 324 n~~~~~W~PQ-~~lL~hp~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~ 398 (500)
T PF00201_consen 324 NVLIVKWLPQ-NDLLAHPRVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEE 398 (500)
T ss_dssp TEEEESS--H-HHHHTSTTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHH
T ss_pred eEEEeccccc-hhhhhcccceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHH
Confidence 7888886543 366765555333332 677999999999999999643 3455666666678877654 5788
Q ss_pred HHHHHHHHHhCccc
Q 001292 558 LSRAFSLFISNGKL 571 (1106)
Q Consensus 558 LAeAI~~LLsDpel 571 (1106)
+.++|.++++|+..
T Consensus 399 l~~ai~~vl~~~~y 412 (500)
T PF00201_consen 399 LRAAIREVLENPSY 412 (500)
T ss_dssp HHHHHHHHHHSHHH
T ss_pred HHHHHHHHHhhhHH
Confidence 99999999999876
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.87 Score=55.40 Aligned_cols=113 Identities=12% Similarity=0.095 Sum_probs=70.7
Q ss_pred cEEEcCChhhHHHHHHH--cCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhcc-CCeEEEEc-----
Q 001292 484 SVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAE-GAQVIFFQ----- 551 (1106)
Q Consensus 484 rV~flG~~eDL~~Lyaa--ADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~D-g~nG~LV~----- 551 (1106)
++++.+.... ..+|+. +++||.- ++-++++||+++|+|+|+- |...+...+.+ -+.|+-+.
T Consensus 344 g~~v~~w~PQ-~~vL~h~~v~~fvtH------~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~ 416 (477)
T PLN02863 344 GLVIRGWAPQ-VAILSHRAVGAFLTH------CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADT 416 (477)
T ss_pred CEEecCCCCH-HHHhcCCCcCeEEec------CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCC
Confidence 5777775533 456665 4555532 5568999999999999986 44555555443 25776552
Q ss_pred CCCHHHHHHHHHHHH-hCcccHHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHH
Q 001292 552 KDNPEGLSRAFSLFI-SNGKLSKFARTVASAGRLHAKNM-LALDCVTRYARILE 603 (1106)
Q Consensus 552 ~~D~eeLAeAI~~LL-sDpelRk~r~~mGe~Are~ake~-fsee~v~~Y~eLye 603 (1106)
.-+.++++++|.+++ ++++.++.++++++.+++-+.+- .+.+.++.+.+.+.
T Consensus 417 ~~~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~ 470 (477)
T PLN02863 417 VPDSDELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVV 470 (477)
T ss_pred CcCHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence 236789999999988 55665555566666555554433 33444444444443
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.79 E-value=9.2 Score=43.26 Aligned_cols=250 Identities=17% Similarity=0.161 Sum_probs=129.5
Q ss_pred CChhHHHHHHHHHHHHHCCCEEEEEEcCC-CC----------chHHHHHHhHHHHHhhccCccEEEEccccHHHHHHHHH
Q 001292 234 KDSRSLLLITVVKNLQKLGYVFKIYAVRS-GN----------SHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEA 302 (1106)
Q Consensus 234 ~gGesl~vv~LakaLqe~GyeVtV~t~~d-g~----------~~~i~r~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~ 302 (1106)
..|.+-+++.|++.|..-.|.+.++.... ++ ..-..+.++.......+..||.+..-......+....+
T Consensus 10 RtGnt~QaiaLa~~l~r~eyttk~l~~~~l~~lP~~wl~~yp~~~~~~l~~~~~~r~p~~~Pdl~I~aGrrta~l~~~lk 89 (329)
T COG3660 10 RTGNTHQAIALAEQLTRSEYTTKLLEYNNLAKLPNFWLAYYPIHILRELFGPRLSRKPEQRPDLIITAGRRTAPLAFYLK 89 (329)
T ss_pred CCccHHHHHHHHHHhhccceEEEEeeccccccCchhhhhcCccHhHHHhhcCccccCccCCCceEEecccchhHHHHHHH
Confidence 45778889999999988667666665541 01 11112233333444444567777666666655555554
Q ss_pred HHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhhhcCCCCCCEEEeCCC
Q 001292 303 KEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGS 382 (1106)
Q Consensus 303 k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~ 382 (1106)
+.. .+ +.++.+..-+ +. .+..|.||.+....... ......++.-|.+.
T Consensus 90 k~~---------~~-~~vVqI~~Pr----lp-----------------~~~fDlvivp~HD~~~~-~s~~~~Nilpi~Gs 137 (329)
T COG3660 90 KKF---------GG-IKVVQIQDPR----LP-----------------YNHFDLVIVPYHDWREE-LSDQGPNILPINGS 137 (329)
T ss_pred Hhc---------CC-ceEEEeeCCC----CC-----------------cccceEEeccchhhhhh-hhccCCceeeccCC
Confidence 431 34 4444444321 11 13456666654333222 22234456555543
Q ss_pred CCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcC
Q 001292 383 PADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN 462 (1106)
Q Consensus 383 GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~ 462 (1106)
+-.+ .+.+. ....+.. +.++..+..+|-++||.-.+ .-.-..+.+.+....+.+.+. + ....||+-..+
T Consensus 138 ~h~V--t~~~l-Aa~~e~~-~~~~p~~rq~vAVlVGg~nk--~f~~~~d~a~q~~~~l~k~l~---~--~g~~~lisfSR 206 (329)
T COG3660 138 PHNV--TSQRL-AALREAF-KHLLPLPRQRVAVLVGGNNK--AFVFQEDKAHQFASLLVKILE---N--QGGSFLISFSR 206 (329)
T ss_pred CCcc--cHHHh-hhhHHHH-HhhCCCCCceEEEEecCCCC--CCccCHHHHHHHHHHHHHHHH---h--CCceEEEEeec
Confidence 2222 01111 1122333 33434456678888885332 111223444444433332221 1 22344454444
Q ss_pred CCCccHHHHHHHHHH-cCCCCCcEEEcCCh---hhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCC
Q 001292 463 STDGYNDALQEVASR-LGLLEHSVRHYGFN---GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP 535 (1106)
Q Consensus 463 GperY~eeLkeLaek-lGL~d~rV~flG~~---eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~g 535 (1106)
-. .+.++.+.+. +.-.. .+.+-+.. .-...+|+.||.++.+..+. .-+-||+|.|+||-+--.+
T Consensus 207 RT---p~~~~s~l~~~l~s~~-~i~w~~~d~g~NPY~~~La~Adyii~TaDSi-----nM~sEAasTgkPv~~~~~~ 274 (329)
T COG3660 207 RT---PDTVKSILKNNLNSSP-GIVWNNEDTGYNPYIDMLAAADYIISTADSI-----NMCSEAASTGKPVFILEPP 274 (329)
T ss_pred CC---cHHHHHHHHhccccCc-eeEeCCCCCCCCchHHHHhhcceEEEecchh-----hhhHHHhccCCCeEEEecC
Confidence 33 2667777765 33332 45555531 24779999999999886554 5678999999999886433
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.84 Score=55.11 Aligned_cols=81 Identities=15% Similarity=0.064 Sum_probs=55.4
Q ss_pred cEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhccC-CeEEEEc-------
Q 001292 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAEG-AQVIFFQ------- 551 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~Dg-~nG~LV~------- 551 (1106)
++.+.+.. .-..+|+..++..+-+. +.-++++||+++|+|+|+- |...+...+.+. ..|+-+.
T Consensus 324 ~~~v~~w~-pQ~~iL~h~~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~ 398 (459)
T PLN02448 324 MGLVVPWC-DQLKVLCHSSVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEET 398 (459)
T ss_pred CEEEeccC-CHHHHhccCccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCC
Confidence 56666744 33446667777333222 6678999999999999986 444556666542 4566553
Q ss_pred CCCHHHHHHHHHHHHhCc
Q 001292 552 KDNPEGLSRAFSLFISNG 569 (1106)
Q Consensus 552 ~~D~eeLAeAI~~LLsDp 569 (1106)
.-+.+++++++.+++.++
T Consensus 399 ~~~~~~l~~av~~vl~~~ 416 (459)
T PLN02448 399 LVGREEIAELVKRFMDLE 416 (459)
T ss_pred cCcHHHHHHHHHHHhcCC
Confidence 237899999999999875
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.14 Score=56.73 Aligned_cols=139 Identities=15% Similarity=0.191 Sum_probs=78.4
Q ss_pred EEEEEeCCCCC----ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch---------------------------------
Q 001292 224 RIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH--------------------------------- 266 (1106)
Q Consensus 224 RIalVlg~L~~----gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~--------------------------------- 266 (1106)
||++|..++.+ ||-..++..|.++|+++|++|.|+.+..+...
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~v~~~ 80 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGVWYEVRVYRY 80 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE----EEEEEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEeccccccccccccceEEEEEEE
Confidence 68888877765 99999999999999999999999986321100
Q ss_pred -------------HHH------------------H---HHhHHHHHhhc--cCccEEEEccccHHHHHHHHHHHhhhhcc
Q 001292 267 -------------SLW------------------E---QIAGQISILGQ--EQYSLIDWSIFDGIIADSLEAKEAISSLM 310 (1106)
Q Consensus 267 -------------~i~------------------r---~lg~lvkiIr~--~~pDiIh~~~~~~i~v~~La~k~~idII~ 310 (1106)
... + ...+....++. .+||+||+|.+.+.++..+.+... .
T Consensus 81 ~~~~v~v~~i~~~~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~----~ 156 (245)
T PF08323_consen 81 PVDGVPVYFIDNPEYFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERY----Q 156 (245)
T ss_dssp EETTEEEEEEESHHHHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCC----S
T ss_pred EcCCccEEEecChhhccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhcccc----c
Confidence 000 0 00113444444 589999999999999877766421 1
Q ss_pred cCC-CCCCcEEEEEcCCcccccchh--hhhhhH-------------HhHHHHHHHHhccccEEEecCCChhh
Q 001292 311 QEP-FHSIPLVWIIQEDSLANRLPV--YVERGF-------------QNLLSYWKSVFSRVNVIVFPDYTLPM 366 (1106)
Q Consensus 311 te~-~~gIPVI~tIHna~Ls~r~~~--Y~~~gl-------------eklis~~~~~l~~AD~VIa~S~~~~~ 366 (1106)
..+ +.++|+|+|+||......... ....++ ...+...+..+..||.|+++|...+.
T Consensus 157 ~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~ 228 (245)
T PF08323_consen 157 QDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAR 228 (245)
T ss_dssp S------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHH
T ss_pred cccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHHhcCEeeeCCHHHHH
Confidence 111 347999999999322111100 000000 01112234557789999998866543
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.54 Score=57.05 Aligned_cols=99 Identities=13% Similarity=0.071 Sum_probs=63.2
Q ss_pred cEEEcCChhhHHHHHHHcC--eEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhh-hccCCeEEEEcC----
Q 001292 484 SVRHYGFNGDVNGVLLMAD--IVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEY-VAEGAQVIFFQK---- 552 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaAD--VfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~Ei-V~Dg~nG~LV~~---- 552 (1106)
++.+.+.. .-..+|+... .||.- ++-++++||+++|+|+|+- |....... +..-+.|+.+..
T Consensus 341 rg~v~~w~-PQ~~iL~h~~vg~fvtH------~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 413 (475)
T PLN02167 341 RGLVCGWA-PQVEILAHKAIGGFVSH------CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVS 413 (475)
T ss_pred CeeeeccC-CHHHHhcCcccCeEEee------CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccc
Confidence 44555644 2334666644 45532 4457999999999999986 34444433 434356765532
Q ss_pred -----CCHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHHHHHh
Q 001292 553 -----DNPEGLSRAFSLFISNG-KLSKFARTVASAGRLHAKNM 589 (1106)
Q Consensus 553 -----~D~eeLAeAI~~LLsDp-elRk~r~~mGe~Are~ake~ 589 (1106)
-+.++++++|.+++.++ +.++.++++++.+++-+.+-
T Consensus 414 ~~~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~g 456 (475)
T PLN02167 414 AYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDG 456 (475)
T ss_pred ccCCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCC
Confidence 36889999999999765 44555666666666665544
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=94.44 E-value=1 Score=54.33 Aligned_cols=80 Identities=13% Similarity=0.061 Sum_probs=54.7
Q ss_pred cEEEcCChhhHHHHHHHcCe--EEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhccC-CeEEEE-cCCCH
Q 001292 484 SVRHYGFNGDVNGVLLMADI--VLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAEG-AQVIFF-QKDNP 555 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaADV--fV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~Dg-~nG~LV-~~~D~ 555 (1106)
++.+.+.... ..+|+..++ ||.- ++-++++||+++|+|+|+- |.......+.+. +.|+-+ ..-+.
T Consensus 325 ~g~v~~w~PQ-~~iL~h~~v~~fvtH------~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~ 397 (451)
T PLN02410 325 RGYIVKWAPQ-KEVLSHPAVGGFWSH------CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDR 397 (451)
T ss_pred CeEEEccCCH-HHHhCCCccCeeeec------CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccH
Confidence 5666674422 236666555 5532 5568999999999999986 444555665543 577655 23478
Q ss_pred HHHHHHHHHHHhCcc
Q 001292 556 EGLSRAFSLFISNGK 570 (1106)
Q Consensus 556 eeLAeAI~~LLsDpe 570 (1106)
++++++|.+++.+++
T Consensus 398 ~~v~~av~~lm~~~~ 412 (451)
T PLN02410 398 GAVERAVKRLMVEEE 412 (451)
T ss_pred HHHHHHHHHHHcCCc
Confidence 899999999998864
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=94.40 E-value=6.9 Score=43.54 Aligned_cols=99 Identities=23% Similarity=0.279 Sum_probs=57.7
Q ss_pred EEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcC--
Q 001292 412 IVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG-- 489 (1106)
Q Consensus 412 ~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG-- 489 (1106)
.+++..|+....+ ....+...+.++.|.+ .++++ +++|...+. +..+++.+..+... .+.+.|
T Consensus 123 ~i~i~~~~~~~~k--~w~~~~~~~l~~~l~~---------~~~~i-vl~g~~~e~--~~~~~i~~~~~~~~-~~~~~~~~ 187 (279)
T cd03789 123 VVVLPPGASGPAK--RWPAERFAALADRLLA---------RGARV-VLTGGPAER--ELAEEIAAALGGPR-VVNLAGKT 187 (279)
T ss_pred EEEECCCCCCccc--cCCHHHHHHHHHHHHH---------CCCEE-EEEechhhH--HHHHHHHHhcCCCc-cccCcCCC
Confidence 3444555433211 3344555555554442 14453 555655443 56666666543222 455666
Q ss_pred ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec
Q 001292 490 FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1106)
Q Consensus 490 ~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS 532 (1106)
...++..+++.||++|-+.+ ..+--|.|+|+|+|+-
T Consensus 188 ~l~e~~~li~~~~l~I~~Ds-------g~~HlA~a~~~p~i~l 223 (279)
T cd03789 188 SLRELAALLARADLVVTNDS-------GPMHLAAALGTPTVAL 223 (279)
T ss_pred CHHHHHHHHHhCCEEEeeCC-------HHHHHHHHcCCCEEEE
Confidence 45899999999999996632 2334457999999985
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=94.34 E-value=1.2 Score=54.01 Aligned_cols=100 Identities=13% Similarity=0.123 Sum_probs=65.1
Q ss_pred cEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhcc-CCeEEEEcC------
Q 001292 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAE-GAQVIFFQK------ 552 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~D-g~nG~LV~~------ 552 (1106)
+..+.+.... ..+|+.+.+..+-+. +.=++++||+++|+|+|+- |...+...+.+ -+.|+.+..
T Consensus 325 ~g~v~~w~PQ-~~iL~h~~vg~FitH----~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 399 (456)
T PLN02210 325 QGVVLEWSPQ-EKILSHMAISCFVTH----CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGE 399 (456)
T ss_pred CeEEEecCCH-HHHhcCcCcCeEEee----CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCc
Confidence 3445564433 347777874333322 4457899999999999986 44445556654 357776632
Q ss_pred CCHHHHHHHHHHHHhCcc---cHHHHHHHHHHHHHHHHH
Q 001292 553 DNPEGLSRAFSLFISNGK---LSKFARTVASAGRLHAKN 588 (1106)
Q Consensus 553 ~D~eeLAeAI~~LLsDpe---lRk~r~~mGe~Are~ake 588 (1106)
-+.++++++|.+++.+++ .|..++++.+.+++-+.+
T Consensus 400 ~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~ 438 (456)
T PLN02210 400 LKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAP 438 (456)
T ss_pred CCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcC
Confidence 378899999999998765 444555566666655544
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=94.24 E-value=13 Score=42.83 Aligned_cols=111 Identities=14% Similarity=0.157 Sum_probs=61.4
Q ss_pred HHHHcCCC-CCcEEEEEEcccC-ccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHc
Q 001292 401 LRKENGFL-KDEIVVVVVGSSF-FYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRL 478 (1106)
Q Consensus 401 LR~~lGL~-~d~~VIL~VGRl~-~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaekl 478 (1106)
+...+++. ++..+++..|... +++ ..-.+...+..+.|.+ .+++ +++.|...++ +..+++++..
T Consensus 170 ~~~~~~~~~~~~~i~i~pga~~~~~K--~Wp~e~~a~l~~~l~~---------~~~~-vvl~Gg~~e~--~~~~~i~~~~ 235 (348)
T PRK10916 170 TCAAFSLSSERPIIGFCPGAEFGPAK--RWPHYHYAELAQQLID---------EGYQ-VVLFGSAKDH--EAGNEILAAL 235 (348)
T ss_pred HHHHcCCCCCCCEEEEeCCCCCcccc--CCCHHHHHHHHHHHHH---------CCCe-EEEEeCHHhH--HHHHHHHHhc
Confidence 44455553 3455666666532 322 2233344444433321 2345 3555654443 5555655543
Q ss_pred CCC--CCcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec
Q 001292 479 GLL--EHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1106)
Q Consensus 479 GL~--d~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS 532 (1106)
+-. ...+.+.| +..++..+++.||++|-.- + ..+-=|.|+|+|+|+-
T Consensus 236 ~~~~~~~~~~l~g~~sL~el~ali~~a~l~I~nD-----T--Gp~HlAaA~g~P~val 286 (348)
T PRK10916 236 NTEQQAWCRNLAGETQLEQAVILIAACKAIVTND-----S--GLMHVAAALNRPLVAL 286 (348)
T ss_pred ccccccceeeccCCCCHHHHHHHHHhCCEEEecC-----C--hHHHHHHHhCCCEEEE
Confidence 321 10245667 4589999999999999553 2 3344588999999974
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.71 Score=55.77 Aligned_cols=82 Identities=12% Similarity=0.141 Sum_probs=57.9
Q ss_pred cEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhccC-CeEEEEcC------
Q 001292 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAEG-AQVIFFQK------ 552 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~Dg-~nG~LV~~------ 552 (1106)
++.+.+... -..+|+...+..+-+. +..++++||+++|+|+|+- |.......+.+. ..|+-+..
T Consensus 318 ~~~i~~W~P-Q~~iL~H~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~ 392 (449)
T PLN02173 318 KSLVLKWSP-QLQVLSNKAIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGI 392 (449)
T ss_pred ceEEeCCCC-HHHHhCCCccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCc
Confidence 677778543 3347777775554443 6679999999999999986 444556666553 46665532
Q ss_pred CCHHHHHHHHHHHHhCcc
Q 001292 553 DNPEGLSRAFSLFISNGK 570 (1106)
Q Consensus 553 ~D~eeLAeAI~~LLsDpe 570 (1106)
-+.+++++++.+++.+++
T Consensus 393 ~~~e~v~~av~~vm~~~~ 410 (449)
T PLN02173 393 AKREEIEFSIKEVMEGEK 410 (449)
T ss_pred ccHHHHHHHHHHHhcCCh
Confidence 167999999999998754
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=94.07 E-value=5.5 Score=44.88 Aligned_cols=57 Identities=16% Similarity=0.162 Sum_probs=40.3
Q ss_pred HHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecC
Q 001292 469 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 533 (1106)
Q Consensus 469 eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD 533 (1106)
+..+++.+++.-.. .|.......++..+++.||++| ++++ |.++=|+++|+|+|+-.
T Consensus 220 ~~~~~l~~~~~~~~-~i~~~~~~~e~~~~i~~~~~vI-~~Rl------H~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 220 PLARALRDQLLGPA-EVLSPLDPEELLGLFASARLVI-GMRL------HALILAAAAGVPFVALS 276 (298)
T ss_pred HHHHHHHHhcCCCc-EEEecCCHHHHHHHHhhCCEEE-Eech------HHHHHHHHcCCCEEEee
Confidence 45556666554333 4543335678899999999866 4455 78999999999999763
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.25 Score=59.85 Aligned_cols=111 Identities=11% Similarity=0.090 Sum_probs=69.2
Q ss_pred EEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhccCCeEEEEcC------CC
Q 001292 485 VRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAEGAQVIFFQK------DN 554 (1106)
Q Consensus 485 V~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~Dg~nG~LV~~------~D 554 (1106)
+++.+... -.++|+...+..+-+. ++-++++||+++|+|+|+- |.......+..-..|+.+.. -+
T Consensus 341 ~vv~~W~P-Q~~IL~H~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~ 415 (472)
T PLN02670 341 MIHVGWVP-QVKILSHESVGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFT 415 (472)
T ss_pred eEEeCcCC-HHHHhcCcccceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCc
Confidence 55556442 2336666666333332 5668999999999999996 44445566655567876643 25
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHH
Q 001292 555 PEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILEN 604 (1106)
Q Consensus 555 ~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyes 604 (1106)
.++++++|.+++.+++ ..++.+++++..+..-......++.+.+.+
T Consensus 416 ~e~i~~av~~vm~~~~----g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~ 461 (472)
T PLN02670 416 SDSVAESVRLAMVDDA----GEEIRDKAKEMRNLFGDMDRNNRYVDELVH 461 (472)
T ss_pred HHHHHHHHHHHhcCcc----hHHHHHHHHHHHHHHhCcchhHHHHHHHHH
Confidence 8999999999998864 234455555555444433333344444433
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=92.83 E-value=1.3 Score=53.94 Aligned_cols=98 Identities=13% Similarity=0.131 Sum_probs=61.8
Q ss_pred cEEEcCChhhHHHHH--HHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCch-hhhccCCeEEEEc-----
Q 001292 484 SVRHYGFNGDVNGVL--LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIK-EYVAEGAQVIFFQ----- 551 (1106)
Q Consensus 484 rV~flG~~eDL~~Ly--aaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~-EiV~Dg~nG~LV~----- 551 (1106)
++.+.+... -..+| ..+.+||.- +.-++++||+.+|+|+|+- |..... ..++.-..|..+.
T Consensus 343 ~g~v~~W~P-Q~~iL~H~~v~~FvtH------~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~ 415 (481)
T PLN02554 343 IGKVIGWAP-QVAVLAKPAIGGFVTH------CGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRG 415 (481)
T ss_pred CceEEeeCC-HHHHhCCcccCccccc------CccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccc
Confidence 566666432 33456 344445522 5568999999999999986 333444 3344434566553
Q ss_pred --------CCCHHHHHHHHHHHHh-CcccHHHHHHHHHHHHHHHHH
Q 001292 552 --------KDNPEGLSRAFSLFIS-NGKLSKFARTVASAGRLHAKN 588 (1106)
Q Consensus 552 --------~~D~eeLAeAI~~LLs-DpelRk~r~~mGe~Are~ake 588 (1106)
.-+.++++++|.+++. ++++++.++++++.+++-+.+
T Consensus 416 ~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~ 461 (481)
T PLN02554 416 DLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMD 461 (481)
T ss_pred cccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcC
Confidence 1268899999999996 666665566666666655433
|
|
| >PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis | Back alignment and domain information |
|---|
Probab=92.68 E-value=13 Score=39.66 Aligned_cols=38 Identities=21% Similarity=0.348 Sum_probs=31.8
Q ss_pred ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCC
Q 001292 490 FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF 534 (1106)
Q Consensus 490 ~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~ 534 (1106)
...++..+++.||++|-... |..+=|+++|+|+|+-+.
T Consensus 247 ~~~~~~~~~~~~~~~Is~Rl-------H~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 247 SPDELLELISQADLVISMRL-------HGAILALSLGVPVIAISY 284 (286)
T ss_pred CHHHHHHHHhcCCEEEecCC-------HHHHHHHHcCCCEEEEec
Confidence 55889999999999886543 788999999999998643
|
CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ]. |
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.61 E-value=1.7 Score=55.16 Aligned_cols=138 Identities=11% Similarity=0.009 Sum_probs=93.6
Q ss_pred CCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcC-CCCcc-----HHHHHHHHHHcCC
Q 001292 407 FLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN-STDGY-----NDALQEVASRLGL 480 (1106)
Q Consensus 407 L~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~-GperY-----~eeLkeLaeklGL 480 (1106)
+.++...++++=|+..||. ..+.+.-...|.....+ +..|.+. +|++|. +|..| ...+...++..+.
T Consensus 483 ~~p~~lfd~~~kRiheYKR----q~Lnl~~i~~ly~~i~~--d~~prv~-~iFaGKAhP~y~~aK~iIk~I~~~a~~in~ 555 (750)
T COG0058 483 VDPNALFDGQARRIHEYKR----QLLNLLDIERLYRILKE--DWVPRVQ-IIFAGKAHPADYAAKEIIKLINDVADVINN 555 (750)
T ss_pred cCCCcceeeeehhhhhhhh----hHHhHhhHHHHHHHHhc--CCCCceE-EEEeccCCCcchHHHHHHHHHHHHHHhhcc
Confidence 4467888999988887554 44444333334332211 3446664 577887 44321 2233344444444
Q ss_pred CCCcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhc--cCCeEEEEcC
Q 001292 481 LEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVA--EGAQVIFFQK 552 (1106)
Q Consensus 481 ~d~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~--Dg~nG~LV~~ 552 (1106)
.. +|+|+. .+.-...++.+|||=...|..--|.-|..=+-||..|.+.|++--|...|+.+ +++||+++-.
T Consensus 556 ~l-kVvFl~nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~ 630 (750)
T COG0058 556 KL-KVVFLPNYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGE 630 (750)
T ss_pred cc-eEEEeCCCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCC
Confidence 33 688887 34556789999999988776544588999999999999999999898888886 7889999953
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=92.57 E-value=1.9 Score=52.52 Aligned_cols=115 Identities=7% Similarity=0.038 Sum_probs=70.1
Q ss_pred cEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhc-cCCeEEEEcC----CC
Q 001292 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVA-EGAQVIFFQK----DN 554 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~-Dg~nG~LV~~----~D 554 (1106)
.+++.+... -..+|+...+..+-+. +.-++++||+.+|+|+|+- |.......+. .-..|.-++. -+
T Consensus 339 g~vv~~W~P-Q~~iL~h~~vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~ 413 (481)
T PLN02992 339 GFVVPSWAP-QAEILAHQAVGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVIS 413 (481)
T ss_pred CEEEeecCC-HHHHhCCcccCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCccc
Confidence 467767442 2346677776333322 6678999999999999986 4444555552 4456766632 37
Q ss_pred HHHHHHHHHHHHhCcc---cHHHHHHHHHHHHHHHH---HhcHHHHHHHHHHHHH
Q 001292 555 PEGLSRAFSLFISNGK---LSKFARTVASAGRLHAK---NMLALDCVTRYARILE 603 (1106)
Q Consensus 555 ~eeLAeAI~~LLsDpe---lRk~r~~mGe~Are~ak---e~fsee~v~~Y~eLye 603 (1106)
.++++++|.+++.+++ .++.++++.+.+++-+. -=++...+..+.+-+.
T Consensus 414 ~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~ 468 (481)
T PLN02992 414 RSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQ 468 (481)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHH
Confidence 8899999999998753 34445555555555552 1234444444444333
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=92.29 E-value=1.4 Score=53.41 Aligned_cols=82 Identities=12% Similarity=0.075 Sum_probs=54.8
Q ss_pred cEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhccC-CeEEEEc-----CC
Q 001292 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAEG-AQVIFFQ-----KD 553 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~Dg-~nG~LV~-----~~ 553 (1106)
++.+.+... -.++|+...+..+-+. +..++++||+.+|+|+|+- |.......+.+. ..|+-+. .-
T Consensus 328 ~g~v~~W~P-Q~~iL~h~~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 402 (455)
T PLN02152 328 VGMIVSWCS-QIEVLRHRAVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLV 402 (455)
T ss_pred CeEEEeeCC-HHHHhCCcccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcC
Confidence 566667443 3347777776444433 6678999999999999986 444455555441 2454442 23
Q ss_pred CHHHHHHHHHHHHhCcc
Q 001292 554 NPEGLSRAFSLFISNGK 570 (1106)
Q Consensus 554 D~eeLAeAI~~LLsDpe 570 (1106)
+.++++++|.++++++.
T Consensus 403 ~~e~l~~av~~vm~~~~ 419 (455)
T PLN02152 403 ERGEIRRCLEAVMEEKS 419 (455)
T ss_pred cHHHHHHHHHHHHhhhH
Confidence 68999999999998654
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=92.28 E-value=2 Score=52.21 Aligned_cols=100 Identities=15% Similarity=0.112 Sum_probs=60.4
Q ss_pred cEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhcc-CCeEEEE--------
Q 001292 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAE-GAQVIFF-------- 550 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~D-g~nG~LV-------- 550 (1106)
++.+.+... -.++|+...+..+-+. ++-++++||+.+|+|+|+- |......++.+ -+.|+-+
T Consensus 333 ~g~i~~W~P-Q~~IL~H~~vg~FvTH----~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~ 407 (468)
T PLN02207 333 RGMICGWSP-QVEILAHKAVGGFVSH----CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHS 407 (468)
T ss_pred CeEEEEeCC-HHHHhcccccceeeec----CccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEeccccccc
Confidence 555556331 1234555555322222 4557899999999999986 44445554433 3455532
Q ss_pred -cCCCHHHHHHHHHHHHh--CcccHHHHHHHHHHHHHHHHH
Q 001292 551 -QKDNPEGLSRAFSLFIS--NGKLSKFARTVASAGRLHAKN 588 (1106)
Q Consensus 551 -~~~D~eeLAeAI~~LLs--DpelRk~r~~mGe~Are~ake 588 (1106)
..-+.++++++|.+++. ++++|+.++++++.+++-+.+
T Consensus 408 ~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~ 448 (468)
T PLN02207 408 DEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKN 448 (468)
T ss_pred CCcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcC
Confidence 12367899999999997 455555555566655555443
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=91.37 E-value=7.3 Score=47.33 Aligned_cols=80 Identities=9% Similarity=-0.011 Sum_probs=51.1
Q ss_pred EEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecC----CCCchhhhcc-CCeEEEEcC-----CC
Q 001292 485 VRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD----FPIIKEYVAE-GAQVIFFQK-----DN 554 (1106)
Q Consensus 485 V~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD----~gGI~EiV~D-g~nG~LV~~-----~D 554 (1106)
+++.+... -.++|+...+..+-+. +.-++++||+++|+|+|+-. ...+...+.+ -..|+-+.. -+
T Consensus 319 ~v~~~W~P-Q~~vL~h~~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~ 393 (453)
T PLN02764 319 VVWGGWVQ-QPLILSHPSVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFS 393 (453)
T ss_pred cEEeCCCC-HHHHhcCcccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccC
Confidence 44545331 2235655544222222 56789999999999999863 4445566643 345654421 37
Q ss_pred HHHHHHHHHHHHhCc
Q 001292 555 PEGLSRAFSLFISNG 569 (1106)
Q Consensus 555 ~eeLAeAI~~LLsDp 569 (1106)
.+++.++|.++++++
T Consensus 394 ~e~i~~av~~vm~~~ 408 (453)
T PLN02764 394 KESLRDAINSVMKRD 408 (453)
T ss_pred HHHHHHHHHHHhcCC
Confidence 899999999999875
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=91.24 E-value=6.2 Score=48.24 Aligned_cols=98 Identities=12% Similarity=0.012 Sum_probs=61.6
Q ss_pred cEEEcCChhhHHHHH--HHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhccC-CeEEEEc-----
Q 001292 484 SVRHYGFNGDVNGVL--LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAEG-AQVIFFQ----- 551 (1106)
Q Consensus 484 rV~flG~~eDL~~Ly--aaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~Dg-~nG~LV~----- 551 (1106)
++.+.+.... ..+| ..+.+||.- +.-++++||+.+|+|+|+- |.......+.+. +.|+-+.
T Consensus 338 ~g~v~~W~PQ-~~iL~H~~v~~FvtH------~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~ 410 (480)
T PLN02555 338 KGKIVQWCPQ-EKVLAHPSVACFVTH------CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAE 410 (480)
T ss_pred ceEEEecCCH-HHHhCCCccCeEEec------CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccc
Confidence 6666674432 3355 345555532 5568999999999999986 344455555544 5666551
Q ss_pred --CCCHHHHHHHHHHHHhCcc---cHHHHHHHHHHHHHHHHH
Q 001292 552 --KDNPEGLSRAFSLFISNGK---LSKFARTVASAGRLHAKN 588 (1106)
Q Consensus 552 --~~D~eeLAeAI~~LLsDpe---lRk~r~~mGe~Are~ake 588 (1106)
.-+.++++++|.+++.+++ .|+.++++++.+++-+.+
T Consensus 411 ~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~e 452 (480)
T PLN02555 411 NKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAE 452 (480)
T ss_pred cCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcC
Confidence 1257899999999997653 344445555555544433
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=90.79 E-value=21 Score=41.30 Aligned_cols=64 Identities=25% Similarity=0.317 Sum_probs=44.5
Q ss_pred EEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec
Q 001292 457 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1106)
Q Consensus 457 LIIVG~GperY~eeLkeLaeklGL~d~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS 532 (1106)
++++|...+. +..+++++.+.- .+.+.| +..++..+++.||++|-+.+ ..+-=|.|+|+|+|+-
T Consensus 211 Vvl~g~~~e~--e~~~~i~~~~~~---~~~l~~k~sL~e~~~li~~a~l~I~~DS-------g~~HlAaA~~~P~I~i 276 (334)
T COG0859 211 VVLFGGPDEE--ERAEEIAKGLPN---AVILAGKTSLEELAALIAGADLVIGNDS-------GPMHLAAALGTPTIAL 276 (334)
T ss_pred EEEecChHHH--HHHHHHHHhcCC---ccccCCCCCHHHHHHHHhcCCEEEccCC-------hHHHHHHHcCCCEEEE
Confidence 5666665443 677777774432 233667 55899999999999886542 2344589999999985
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=89.66 E-value=4.2 Score=49.84 Aligned_cols=112 Identities=10% Similarity=0.028 Sum_probs=64.8
Q ss_pred cEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCC----CCchhhhcc-CCeEEEEc-------
Q 001292 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYVAE-GAQVIFFQ------- 551 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~----gGI~EiV~D-g~nG~LV~------- 551 (1106)
++++.|.... ..+++..++..+-+. +..++++||+++|+|+|+-.. ......+.+ -+.|+-+.
T Consensus 345 g~~v~~w~pq-~~iL~h~~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~ 419 (491)
T PLN02534 345 GLLIKGWAPQ-VLILSHPAIGGFLTH----CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRW 419 (491)
T ss_pred CeeccCCCCH-HHHhcCCccceEEec----CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccc
Confidence 5677675433 457777887433332 667899999999999998743 223333322 12333221
Q ss_pred --------CCCHHHHHHHHHHHHhC-----cccHHHHHHHHHHHHHHHHHh-cHHHHHHHHHH
Q 001292 552 --------KDNPEGLSRAFSLFISN-----GKLSKFARTVASAGRLHAKNM-LALDCVTRYAR 600 (1106)
Q Consensus 552 --------~~D~eeLAeAI~~LLsD-----pelRk~r~~mGe~Are~ake~-fsee~v~~Y~e 600 (1106)
.-+.++++++|.+++.+ .+.|+.+.++++.+++-+.+- ++...++.+.+
T Consensus 420 ~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~ 482 (491)
T PLN02534 420 GDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQ 482 (491)
T ss_pred cccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 13688999999999962 233444555555555554432 23333444433
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=89.10 E-value=5.5 Score=45.57 Aligned_cols=111 Identities=18% Similarity=0.208 Sum_probs=64.3
Q ss_pred HHHHHHcCCCC-CcEEEEEEcccC-ccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHH
Q 001292 399 YQLRKENGFLK-DEIVVVVVGSSF-FYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVAS 476 (1106)
Q Consensus 399 ~~LR~~lGL~~-d~~VIL~VGRl~-~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLae 476 (1106)
..+...+++.+ +..+++..|... +++ ....+...+.++.|.+ .+.+ +++.|...++ +..+++.+
T Consensus 162 ~~~~~~~~~~~~~~~i~i~pga~~~~~K--~Wp~e~~~~li~~l~~---------~~~~-ivl~G~~~e~--~~~~~i~~ 227 (334)
T TIGR02195 162 AAALAKFGLDTERPIIAFCPGAEFGPAK--RWPHEHYAELAKRLID---------QGYQ-VVLFGSAKDH--PAGNEIEA 227 (334)
T ss_pred HHHHHHcCCCCCCCEEEEcCCCCCCccC--CCCHHHHHHHHHHHHH---------CCCE-EEEEEChhhH--HHHHHHHH
Confidence 34456667654 345556666532 311 3344455555444431 1345 4556655543 55556655
Q ss_pred HcCCCCCcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec
Q 001292 477 RLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1106)
Q Consensus 477 klGL~d~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS 532 (1106)
.. .+..|.+.| ...++..+++.||++|-.-+ ..+-=|.|+|+|+|+-
T Consensus 228 ~~--~~~~~~l~g~~sL~el~ali~~a~l~I~~DS-------Gp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 228 LL--PGELRNLAGETSLDEAVDLIALAKAVVTNDS-------GLMHVAAALNRPLVAL 276 (334)
T ss_pred hC--CcccccCCCCCCHHHHHHHHHhCCEEEeeCC-------HHHHHHHHcCCCEEEE
Confidence 33 221344677 55899999999999995532 3344578999999975
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=88.92 E-value=1.6 Score=41.45 Aligned_cols=77 Identities=17% Similarity=0.236 Sum_probs=54.2
Q ss_pred EEEEcCCCCccHHHHHHHHHHcCCCCCcEEE---cCCh-h--hHHHHHHHcCeEEEccCCCCCCCcHHHH-----HHHHh
Q 001292 457 VFLCGNSTDGYNDALQEVASRLGLLEHSVRH---YGFN-G--DVNGVLLMADIVLYGSSQVEQGFPSLIV-----RAMTF 525 (1106)
Q Consensus 457 LIIVG~GperY~eeLkeLaeklGL~d~rV~f---lG~~-e--DL~~LyaaADVfV~PS~~EeEGFGlvLL-----EAMA~ 525 (1106)
|+|+|.... ...+++.+++.|.. .+.+ .|.. . .+...+..||++|++..+. ++... +|-..
T Consensus 3 liVGG~~~~--~~~~~~~~~~~G~~--~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~v----sH~~~~~vk~~akk~ 74 (97)
T PF10087_consen 3 LIVGGREDR--ERRYKRILEKYGGK--LIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYV----SHNAMWKVKKAAKKY 74 (97)
T ss_pred EEEcCCccc--HHHHHHHHHHcCCE--EEEEecCCCCccchhHHHHhcCCCCEEEEEeCCc----ChHHHHHHHHHHHHc
Confidence 455553443 58999999999987 4666 2222 2 3888999999999987654 45443 45678
Q ss_pred CCCEEecCCCCchhhh
Q 001292 526 GIPVITPDFPIIKEYV 541 (1106)
Q Consensus 526 G~PVIASD~gGI~EiV 541 (1106)
|+|++.++..+...+.
T Consensus 75 ~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 75 GIPIIYSRSRGVSSLE 90 (97)
T ss_pred CCcEEEECCCCHHHHH
Confidence 9999999877766543
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=88.47 E-value=18 Score=43.89 Aligned_cols=78 Identities=10% Similarity=0.034 Sum_probs=52.2
Q ss_pred EEEcCChhhHHHHHHHcC--eEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhc-cCCeEEEEcC-----
Q 001292 485 VRHYGFNGDVNGVLLMAD--IVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVA-EGAQVIFFQK----- 552 (1106)
Q Consensus 485 V~flG~~eDL~~LyaaAD--VfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~-Dg~nG~LV~~----- 552 (1106)
.++.+... -..+|+.+. .||.- +.-++++||+++|+|+|+- |.......+. .-..|+.+..
T Consensus 314 ~vv~~w~P-Q~~vL~h~~v~~fvtH------~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~ 386 (446)
T PLN00414 314 IVWEGWVE-QPLILSHPSVGCFVNH------CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGW 386 (446)
T ss_pred eEEeccCC-HHHHhcCCccceEEec------CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCc
Confidence 44445332 234665664 45532 5568999999999999986 4444556664 3457766632
Q ss_pred CCHHHHHHHHHHHHhCc
Q 001292 553 DNPEGLSRAFSLFISNG 569 (1106)
Q Consensus 553 ~D~eeLAeAI~~LLsDp 569 (1106)
-+.+++++++.+++.++
T Consensus 387 ~~~~~i~~~v~~~m~~~ 403 (446)
T PLN00414 387 FSKESLRDTVKSVMDKD 403 (446)
T ss_pred cCHHHHHHHHHHHhcCC
Confidence 47899999999999875
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.46 E-value=2.4 Score=51.62 Aligned_cols=81 Identities=10% Similarity=0.087 Sum_probs=53.5
Q ss_pred EEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhc-cCCeEEEEcC-------
Q 001292 485 VRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVA-EGAQVIFFQK------- 552 (1106)
Q Consensus 485 V~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~-Dg~nG~LV~~------- 552 (1106)
+++.+.. .-..+|+.+++..+-+. +.-++++||+++|+|+|+- |.......+. .-..|+-+..
T Consensus 341 ~~v~~w~-PQ~~iL~h~~vg~fvtH----~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~ 415 (480)
T PLN00164 341 LVWPTWA-PQKEILAHAAVGGFVTH----CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNF 415 (480)
T ss_pred eEEeecC-CHHHHhcCcccCeEEee----cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCc
Confidence 5555543 23456777775333332 5568999999999999986 4445555443 3356766532
Q ss_pred CCHHHHHHHHHHHHhCcc
Q 001292 553 DNPEGLSRAFSLFISNGK 570 (1106)
Q Consensus 553 ~D~eeLAeAI~~LLsDpe 570 (1106)
-+.++++++|.+++.+++
T Consensus 416 ~~~e~l~~av~~vm~~~~ 433 (480)
T PLN00164 416 VEAAELERAVRSLMGGGE 433 (480)
T ss_pred CcHHHHHHHHHHHhcCCc
Confidence 267999999999998753
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=88.17 E-value=2.4 Score=47.22 Aligned_cols=71 Identities=18% Similarity=0.133 Sum_probs=46.9
Q ss_pred CCeEEEEEEcCCCCccHHHHHHHHHHc-CCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEE
Q 001292 452 GSFKFVFLCGNSTDGYNDALQEVASRL-GLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVI 530 (1106)
Q Consensus 452 PdikfLIIVG~GperY~eeLkeLaekl-GL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVI 530 (1106)
|+.+ +++=.||......-..+..+. +.. ++.+.....++..++..||.++.-+ +.+-+||+.+|+|||
T Consensus 154 p~~~--lvvK~HP~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Ll~~s~~Vvtin-------StvGlEAll~gkpVi 222 (269)
T PF05159_consen 154 PDAK--LVVKPHPDERGGNKYSYLEELPNLP--NVVIIDDDVNLYELLEQSDAVVTIN-------STVGLEALLHGKPVI 222 (269)
T ss_pred CCCE--EEEEECchhhCCCChhHhhhhhcCC--CeEEECCCCCHHHHHHhCCEEEEEC-------CHHHHHHHHcCCceE
Confidence 6665 456777731000001222222 333 5777777779999999999988654 468899999999999
Q ss_pred ecC
Q 001292 531 TPD 533 (1106)
Q Consensus 531 ASD 533 (1106)
+--
T Consensus 223 ~~G 225 (269)
T PF05159_consen 223 VFG 225 (269)
T ss_pred Eec
Confidence 953
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=87.94 E-value=2.3 Score=51.36 Aligned_cols=82 Identities=15% Similarity=0.094 Sum_probs=54.7
Q ss_pred cEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhcc-CCeEEEEcC-----C
Q 001292 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAE-GAQVIFFQK-----D 553 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~D-g~nG~LV~~-----~ 553 (1106)
++++.+.... .++|+...+..+-+. +.=++++||+++|+|+|+- |......++.+ -..|+.+.. -
T Consensus 312 g~~v~~W~PQ-~~iL~H~~v~~FvtH----cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~ 386 (442)
T PLN02208 312 GVVWGGWVQQ-PLILDHPSIGCFVNH----CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWF 386 (442)
T ss_pred CcEeeccCCH-HHHhcCCccCeEEcc----CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcC
Confidence 5666564322 236666776444432 5668999999999999986 34445555443 356766643 3
Q ss_pred CHHHHHHHHHHHHhCcc
Q 001292 554 NPEGLSRAFSLFISNGK 570 (1106)
Q Consensus 554 D~eeLAeAI~~LLsDpe 570 (1106)
+.++++++|.++++++.
T Consensus 387 ~~~~l~~ai~~~m~~~~ 403 (442)
T PLN02208 387 SKESLSNAIKSVMDKDS 403 (442)
T ss_pred cHHHHHHHHHHHhcCCc
Confidence 78899999999998763
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.24 E-value=18 Score=46.40 Aligned_cols=151 Identities=9% Similarity=0.046 Sum_probs=104.4
Q ss_pred CCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHH-------HHH----H
Q 001292 409 KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQE-------VAS----R 477 (1106)
Q Consensus 409 ~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLke-------Lae----k 477 (1106)
.+..+|+-+-++.. .||...=+.|+.+++.++++... .+. |+.+......-.+.+++ .+. +
T Consensus 274 ~g~klilgvD~~d~----~kg~~~Kl~a~e~~L~~~pe~~~---kVv-liqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~ 345 (732)
T KOG1050|consen 274 KGKKLILGVDRLDS----IKGIQLKLLAFEQFLEEYPEWID---KVV-LIQIENPKRTDGKEVEELKFCVSVHVRRINEK 345 (732)
T ss_pred cCCceEeccccccc----ccCchHHHHHHHHHHHhChhhhc---eEE-EEEEecCCcccchHHHHHHHHhHhhhhhhhhc
Confidence 36668888878776 66777778888888888765543 333 44444321110121111 111 1
Q ss_pred cCCCC-CcEEEcC---ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhC----CCEEecCCCCchhhhccCCeEEE
Q 001292 478 LGLLE-HSVRHYG---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFG----IPVITPDFPIIKEYVAEGAQVIF 549 (1106)
Q Consensus 478 lGL~d-~rV~flG---~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G----~PVIASD~gGI~EiV~Dg~nG~L 549 (1106)
.|-.. ..|+++- +..++..++..+|+++..+..+ |-.++.+|..+|. .+.|.+.+.|..+.+++ ...+
T Consensus 346 f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rd--Gmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d--~aiv 421 (732)
T KOG1050|consen 346 FGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRD--GMNLVFLEYILCQENKKSVLVLSEFIGDDTTLED--AAIV 421 (732)
T ss_pred cCCcccceEEEeeccCCHHHHhhhHHhhhheeeccccc--ccchhhhHHHHhhcccCCceEEeeeccccccccc--cCEE
Confidence 11111 1354444 3468999999999999999876 9999999998885 78899999999888844 4678
Q ss_pred EcCCCHHHHHHHHHHHHhCccc
Q 001292 550 FQKDNPEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 550 V~~~D~eeLAeAI~~LLsDpel 571 (1106)
+.+.|.++++.+|..+++.++.
T Consensus 422 vnpw~~~~~~~~i~~al~~s~~ 443 (732)
T KOG1050|consen 422 VNPWDGDEFAILISKALTMSDE 443 (732)
T ss_pred ECCcchHHHHHHHHHHhhcCHH
Confidence 8999999999999999987764
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=86.19 E-value=7 Score=45.25 Aligned_cols=103 Identities=15% Similarity=0.181 Sum_probs=58.7
Q ss_pred CcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcC
Q 001292 410 DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 489 (1106)
Q Consensus 410 d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG 489 (1106)
+..+++..|...+.+ ....+...+.++.|.+ .++++++++|.+... .+..+++++...... .+.+.|
T Consensus 183 ~~~i~i~pga~~~~K--~Wp~e~fa~l~~~L~~---------~~~~vvl~ggp~e~e-~~~~~~i~~~~~~~~-~~~l~g 249 (352)
T PRK10422 183 QNYVVIQPTARQIFK--CWDNDKFSAVIDALQA---------RGYEVVLTSGPDKDD-LACVNEIAQGCQTPP-VTALAG 249 (352)
T ss_pred CCeEEEecCCCcccc--CCCHHHHHHHHHHHHH---------CCCeEEEEcCCChHH-HHHHHHHHHhcCCCc-cccccC
Confidence 466777777654422 2234445544444421 234533444444322 233455555333222 355677
Q ss_pred --ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec
Q 001292 490 --FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1106)
Q Consensus 490 --~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS 532 (1106)
...++..+++.||++|-.- + ..+-=|.|+|+|+|+-
T Consensus 250 ~~sL~el~ali~~a~l~v~nD-----S--Gp~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 KTTFPELGALIDHAQLFIGVD-----S--APAHIAAAVNTPLICL 287 (352)
T ss_pred CCCHHHHHHHHHhCCEEEecC-----C--HHHHHHHHcCCCEEEE
Confidence 5689999999999999553 2 3344577999999975
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=85.00 E-value=7.4 Score=50.16 Aligned_cols=188 Identities=10% Similarity=0.060 Sum_probs=109.6
Q ss_pred CCCCcEEEEEEcccCccccccCCHHH-HHHHHHHhHHHHHhhcc-CCCCeEEEEEEcCCCCcc--HHHHHHHHHHcC---
Q 001292 407 FLKDEIVVVVVGSSFFYNELSWDYAV-AMHDVGPLLIKYARRNS-VEGSFKFVFLCGNSTDGY--NDALQEVASRLG--- 479 (1106)
Q Consensus 407 L~~d~~VIL~VGRl~~y~kg~Kg~dl-LLeA~k~Ll~k~aklk~-~~PdikfLIIVG~GperY--~eeLkeLaeklG--- 479 (1106)
+.++...++++-|+..|| ...+ ++..+..+.. +..... .-.... +|++|.-...| ...+-+++....
T Consensus 539 ldp~sLfd~qakR~heYK----Rq~LNil~~i~ry~~-i~~~p~~~~~P~~-~IFaGKAaP~y~~aK~iIk~I~~va~~i 612 (815)
T PRK14986 539 VNPKALFDVQIKRIHEYK----RQLMNVLHVITRYNR-IKADPDAKWVPRV-NIFAGKAASAYYMAKHIIHLINDVAKVI 612 (815)
T ss_pred cCcccceeeeehhhhhhh----hhhHHHhhhHHHHHH-HHhCCCcCCCCeE-EEEeecCCCCcHHHHHHHHHHHHHHHHh
Confidence 567788888998887744 5555 5555544432 111100 002344 57888732222 122222222111
Q ss_pred -----CCC-CcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhcc--CCeEEE
Q 001292 480 -----LLE-HSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE--GAQVIF 549 (1106)
Q Consensus 480 -----L~d-~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~D--g~nG~L 549 (1106)
+.+ -+|.|+. .+.-...++.+|||-...|..--|.-|..=+-+|..|.+.|++--|...|+.++ ++||++
T Consensus 613 n~Dp~v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~ 692 (815)
T PRK14986 613 NNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFI 692 (815)
T ss_pred ccChhhcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEE
Confidence 110 1577777 345677899999999987764345788899999999999999999988888876 789999
Q ss_pred EcCCCHHHHHHHHHH-------HHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC
Q 001292 550 FQKDNPEGLSRAFSL-------FISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNF 608 (1106)
Q Consensus 550 V~~~D~eeLAeAI~~-------LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk~ 608 (1106)
+- .+.++..+.-.. .-.||+++ +.--....-.|+..-...|..++..++..
T Consensus 693 fG-~~~~ev~~~~~~~Y~~~~~y~~~~~l~-------~~~d~i~~g~f~~~~~~~f~~i~~~l~~~ 750 (815)
T PRK14986 693 FG-NTAEEVEALRRQGYKPREYYEKDEELH-------QVLTQIGSGVFSPEEPGRYRDLVDSLINF 750 (815)
T ss_pred eC-CCHHHHHHHHHcCCChhhhccCCHHHH-------HHHHHHhcCCCCCCCchhHHHHHHHhccC
Confidence 85 345555543221 22344431 11112222334432234577777777653
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=83.51 E-value=15 Score=42.35 Aligned_cols=103 Identities=15% Similarity=0.209 Sum_probs=58.2
Q ss_pred CcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcC
Q 001292 410 DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 489 (1106)
Q Consensus 410 d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG 489 (1106)
+..+++..|...+++ ....+...+.++.|.. .++. +++.|...+...+..+++.+..+-.. .+.+.|
T Consensus 181 ~~~i~i~p~a~~~~K--~Wp~e~~~~l~~~l~~---------~~~~-ivl~g~p~~~e~~~~~~i~~~~~~~~-~~~l~g 247 (344)
T TIGR02201 181 QNYIVIQPTSRWFFK--CWDNDRFSALIDALHA---------RGYE-VVLTSGPDKDELAMVNEIAQGCQTPR-VTSLAG 247 (344)
T ss_pred CCEEEEeCCCCcccc--CCCHHHHHHHHHHHHh---------CCCe-EEEecCCCHHHHHHHHHHHhhCCCCc-ccccCC
Confidence 455666777544422 2334445544444431 1334 34555422110133455555433222 355677
Q ss_pred --ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec
Q 001292 490 --FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1106)
Q Consensus 490 --~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS 532 (1106)
...++..+++.||++|-.- + ..+-=|.|+|+|+|+-
T Consensus 248 ~~sL~el~ali~~a~l~Vs~D-----S--Gp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 KLTLPQLAALIDHARLFIGVD-----S--VPMHMAAALGTPLVAL 285 (344)
T ss_pred CCCHHHHHHHHHhCCEEEecC-----C--HHHHHHHHcCCCEEEE
Confidence 5689999999999999553 2 3455588999999985
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PF15024 Glyco_transf_18: Glycosyltransferase family 18 | Back alignment and domain information |
|---|
Probab=82.69 E-value=8.5 Score=47.58 Aligned_cols=76 Identities=14% Similarity=0.225 Sum_probs=58.1
Q ss_pred ChhhHHHHHHHcCeEE-EccCCCCCCCcHHHHHHHHhCCCEEecCCCCc---------------h---------h-hhcc
Q 001292 490 FNGDVNGVLLMADIVL-YGSSQVEQGFPSLIVRAMTFGIPVITPDFPII---------------K---------E-YVAE 543 (1106)
Q Consensus 490 ~~eDL~~LyaaADVfV-~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI---------------~---------E-iV~D 543 (1106)
+..++..+|..+-|+| ++.-+| |.+++||+|+|+|-|-+.+... + | .+ .
T Consensus 331 ~~~ef~~lL~~akvfiGlGfP~E----gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~i-G 405 (559)
T PF15024_consen 331 SGDEFQQLLRKAKVFIGLGFPYE----GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFI-G 405 (559)
T ss_pred CHHHHHHHHHhhhEeeecCCCCC----CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhC-C
Confidence 3679999999999999 344455 8899999999999998754311 1 1 22 1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 001292 544 GAQVIFFQKDNPEGLSRAFSLFISNGK 570 (1106)
Q Consensus 544 g~nG~LV~~~D~eeLAeAI~~LLsDpe 570 (1106)
.-.-+.|+.+|.+++.+||.+++.++-
T Consensus 406 ~PhVytVd~~n~~~v~~Avk~il~~~v 432 (559)
T PF15024_consen 406 EPHVYTVDINNSTEVEAAVKAILATPV 432 (559)
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHhcCC
Confidence 236678888999999999999999863
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=82.36 E-value=18 Score=40.98 Aligned_cols=99 Identities=17% Similarity=0.099 Sum_probs=56.1
Q ss_pred CcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcC
Q 001292 410 DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 489 (1106)
Q Consensus 410 d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG 489 (1106)
+..+++..|.....+ ..-.+...+.++.|.+ .+.. ++++|.+++. .+..+++.+. ++ .+.+.|
T Consensus 179 ~~~i~i~~gas~~~K--~wp~e~~~~l~~~l~~---------~~~~-~vl~~g~~~e-~~~~~~i~~~--~~--~~~l~g 241 (319)
T TIGR02193 179 APYAVLLHATSRDDK--TWPEERWRELARLLLA---------RGLQ-IVLPWGNDAE-KQRAERIAEA--LP--GAVVLP 241 (319)
T ss_pred CCEEEEEeCCCcccC--CCCHHHHHHHHHHHHH---------CCCe-EEEeCCCHHH-HHHHHHHHhh--CC--CCeecC
Confidence 455667777544311 2233445544444431 1334 3444333321 2445565553 33 235567
Q ss_pred --ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec
Q 001292 490 --FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1106)
Q Consensus 490 --~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS 532 (1106)
...++..+++.||++|..- + ..+-=|.|+|+|+|+-
T Consensus 242 ~~sL~el~ali~~a~l~I~~D-----S--gp~HlAaa~g~P~i~l 279 (319)
T TIGR02193 242 KMSLAEVAALLAGADAVVGVD-----T--GLTHLAAALDKPTVTL 279 (319)
T ss_pred CCCHHHHHHHHHcCCEEEeCC-----C--hHHHHHHHcCCCEEEE
Confidence 5689999999999999653 2 2344477899999975
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=81.86 E-value=20 Score=45.76 Aligned_cols=146 Identities=10% Similarity=0.043 Sum_probs=81.1
Q ss_pred CCCCcEEEEEEcccCccccccCCHHH-HHHHHHHhHHHHHhhc-cCCCCeEEEEEEcC-CCCcc-HHHHHHHHHHc----
Q 001292 407 FLKDEIVVVVVGSSFFYNELSWDYAV-AMHDVGPLLIKYARRN-SVEGSFKFVFLCGN-STDGY-NDALQEVASRL---- 478 (1106)
Q Consensus 407 L~~d~~VIL~VGRl~~y~kg~Kg~dl-LLeA~k~Ll~k~aklk-~~~PdikfLIIVG~-GperY-~eeLkeLaekl---- 478 (1106)
+.++...++++-|+..|| ...+ ++..+..+.. ..... ....... +|++|. +|..+ ..++-+++...
T Consensus 440 ldp~slfdv~~rR~heYK----Rq~LniL~ii~~y~r-ik~~p~~~~~Pv~-~IFaGKAhP~d~~gK~iIk~I~~va~~i 513 (713)
T PF00343_consen 440 LDPDSLFDVQARRFHEYK----RQLLNILHIIDRYNR-IKNNPNKKIRPVQ-FIFAGKAHPGDYMGKEIIKLINNVAEVI 513 (713)
T ss_dssp --TTSEEEEEES-SCCCC----THHHHHHHHHHHHHH-HHHSTTSCCS-EE-EEEE----TT-HHHHHHHHHHHHHHHHH
T ss_pred CCcchhhhhhhhhccccc----ccCcccccHHHHHHH-HHhcccCCCCCeE-EEEeccCCCCcHHHHHHHHHHHHHHHHH
Confidence 577888899998888754 4455 4444433321 11111 1112344 688887 44321 22333333221
Q ss_pred ----CCCC-CcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhcc--CCeEEE
Q 001292 479 ----GLLE-HSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE--GAQVIF 549 (1106)
Q Consensus 479 ----GL~d-~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~D--g~nG~L 549 (1106)
.+.+ .+|+|+. .+.-...++.+|||-...|..--|.-|..-+-||..|.+.|++--|...|+.+. .++.++
T Consensus 514 n~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fi 593 (713)
T PF00343_consen 514 NNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFI 593 (713)
T ss_dssp CT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEE
T ss_pred hcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEE
Confidence 1221 1578887 446677899999999988765446899999999999999999988888887643 357777
Q ss_pred EcCCCHHHHH
Q 001292 550 FQKDNPEGLS 559 (1106)
Q Consensus 550 V~~~D~eeLA 559 (1106)
+- .+.+++.
T Consensus 594 FG-~~~~ev~ 602 (713)
T PF00343_consen 594 FG-LTAEEVE 602 (713)
T ss_dssp ES--BHHHHH
T ss_pred cC-CCHHHHH
Confidence 74 3455443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=81.19 E-value=1.1e+02 Score=35.26 Aligned_cols=290 Identities=14% Similarity=0.129 Sum_probs=136.1
Q ss_pred hhHHHHHHHHHHHHHCCCEEEEEEcCCCC-----c---------hHHHHHHhHHHHHhhccCccEEEEcccc-----HHH
Q 001292 236 SRSLLLITVVKNLQKLGYVFKIYAVRSGN-----S---------HSLWEQIAGQISILGQEQYSLIDWSIFD-----GII 296 (1106)
Q Consensus 236 Gesl~vv~LakaLqe~GyeVtV~t~~dg~-----~---------~~i~r~lg~lvkiIr~~~pDiIh~~~~~-----~i~ 296 (1106)
|++......-..+.+.|++++++...+.. . ....+.+...++.+. .||++-+..+. ..+
T Consensus 2 GVTr~a~e~~~wf~KNg~~~~i~~a~e~sftR~dsH~~~~~si~k~~~~e~de~v~~vN--~yDI~m~nSvPa~~vqE~~ 79 (355)
T PF11440_consen 2 GVTRNALEMRDWFDKNGVEFTIVSADEKSFTRPDSHDSKSFSIPKYLAKEYDETVKKVN--DYDIVMFNSVPATKVQEAI 79 (355)
T ss_dssp HHHHHHHHHHHHHHHTT-EEEEEEETSS--TTTTSSS-TTTEEEE-TTTHHHHHHHHHT--SSSEEEEEE--BTTS-HHH
T ss_pred CccccHHHHHHHHHhcCCeeEEEEecccccCCccccccceeeeehhhHHHHHHHHHHhh--ccCEEEEecccCchHHHHH
Confidence 67788888888899999999999874321 1 011122222444444 78877664333 223
Q ss_pred HHHHHHHHhhhhcccCCCCCCcEEEEEcCCc-c-cccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhh---h-cC
Q 001292 297 ADSLEAKEAISSLMQEPFHSIPLVWIIQEDS-L-ANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML---Y-SV 370 (1106)
Q Consensus 297 v~~La~k~~idII~te~~~gIPVI~tIHna~-L-s~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~---~-~g 370 (1106)
+....+ .+- .....+.+|...|+-. + ..+.++ +...++.+|.|...+....-. . .-
T Consensus 80 iNnY~k-ii~-----~Ik~~ik~V~~~Hdh~~lsI~rn~~------------le~~m~~~DvIfshs~~g~f~kv~m~~l 141 (355)
T PF11440_consen 80 INNYEK-IIK-----KIKPSIKVVGFMHDHNKLSIDRNPY------------LEGTMNEMDVIFSHSDNGWFSKVLMKEL 141 (355)
T ss_dssp HHHHHH-HHH-----CS-TTSEEEEEE---SHHHHTTBSS------------HHHHHHH-SEEEES-TTSHHHHTHHHHH
T ss_pred HHHHHH-HHH-----hccccceeEEEeeccceeecccccc------------HHHHHHhhcEEEeccccchHHHHHHHhh
Confidence 333322 110 0023456677778732 1 122222 234578999998876432111 1 11
Q ss_pred CCC-----CCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEE---EEEcccCccccccCCHHHHHHHHHHhHH
Q 001292 371 LDA-----GNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVV---VVVGSSFFYNELSWDYAVAMHDVGPLLI 442 (1106)
Q Consensus 371 i~~-----~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VI---L~VGRl~~y~kg~Kg~dlLLeA~k~Ll~ 442 (1106)
+|. +++.-.|.. -.|.+...-...|..+-.....+.. +++||... .||+..+++.....++
T Consensus 142 ~Ps~~~l~~~i~~~p~v-------~nfqpp~~i~~~Rstywkd~se~nmnv~~yigR~Tt----~kG~~~mfD~h~~~lK 210 (355)
T PF11440_consen 142 LPSKVSLFDRIKKFPMV-------FNFQPPMDINKYRSTYWKDVSEKNMNVNRYIGRQTT----WKGPRRMFDLHEKILK 210 (355)
T ss_dssp S-SS--SSS-------E-------EE----B-HHHHHHHH---GGGSEEEEEEEE--SSG----GG-HHHHHHHHHHTTT
T ss_pred ccccCchhhhhhhccee-------eecCCcccHHHHHHHHhhhhHhhhcccceeeeeeee----ecCcHHHhhhHHHhcC
Confidence 221 223333321 1233322223445544433344444 89999888 8899999998866542
Q ss_pred HHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHH------cCC---------CCCcEEEcC-Ch-hhHHHHHHHcCeEE
Q 001292 443 KYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASR------LGL---------LEHSVRHYG-FN-GDVNGVLLMADIVL 505 (1106)
Q Consensus 443 k~aklk~~~PdikfLIIVG~GperY~eeLkeLaek------lGL---------~d~rV~flG-~~-eDL~~LyaaADVfV 505 (1106)
. ++++ -++-|-... .+.-...++ .+. ++..|-++| +. +++.+.++.+-..+
T Consensus 211 ------~--~~~~-t~~~GierS---~A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy 278 (355)
T PF11440_consen 211 ------P--AGFK-TIMEGIERS---PAKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSEGLERMAKSLFGY 278 (355)
T ss_dssp ------T--TT-E-EEEE---SS---THHHHHHHTT--EEEE-CTGGGG---SSS--EEEESS--HHHHHHHHHTEEEEE
T ss_pred ------C--cchh-HHhhhhhcC---CceeeeecCCcccccCccccccCcccCCCCcceecchhhhHHHHHHHhhcccee
Confidence 2 5666 466664332 122222222 111 223477777 33 78888888887766
Q ss_pred EccCCC----CCCCcHHHHHHHHhC-CCEEecCCCCc-------hhhhccCCeEEEEcCCCHHHHHHHHHHHHhC
Q 001292 506 YGSSQV----EQGFPSLIVRAMTFG-IPVITPDFPII-------KEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 568 (1106)
Q Consensus 506 ~PS~~E----eEGFGlvLLEAMA~G-~PVIASD~gGI-------~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsD 568 (1106)
.-+... .+..-.+-+|..||| +||.-...|.. .-++.+....+.++..|.++-.+.|.++.++
T Consensus 279 ~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I~~De~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 279 QLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAIYFDENDLESTVEKLIEVANN 353 (355)
T ss_dssp E-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-EEE-TTSHHHHHHHHHHHHT-
T ss_pred ecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcceeEeccchHHHHHHHHHHHhcc
Confidence 444211 124568899999999 56665543332 2344444556677888888888888887664
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=80.43 E-value=8.5 Score=49.53 Aligned_cols=148 Identities=14% Similarity=0.026 Sum_probs=92.9
Q ss_pred CCCCcEEEEEEcccCccccccCCHHH-HHHHHHHhHHHHHhhccC-CCCeEEEEEEcCCCCcc--HHHHHHHHHHcC---
Q 001292 407 FLKDEIVVVVVGSSFFYNELSWDYAV-AMHDVGPLLIKYARRNSV-EGSFKFVFLCGNSTDGY--NDALQEVASRLG--- 479 (1106)
Q Consensus 407 L~~d~~VIL~VGRl~~y~kg~Kg~dl-LLeA~k~Ll~k~aklk~~-~PdikfLIIVG~GperY--~eeLkeLaeklG--- 479 (1106)
+.++.+.++++-|+..|| .+.+ ++..+..+.. +...... -.... +|++|.-...| ...+-+++....
T Consensus 523 ldp~slfdvq~KR~heYK----Rq~LNil~ii~~y~~-i~~~p~~~~~P~~-~IFaGKAaP~y~~aK~iIklI~~va~~i 596 (794)
T TIGR02093 523 VDPNSIFDVQVKRLHEYK----RQLLNVLHVIYLYNR-IKEDPPKDIVPRT-VIFGGKAAPGYHMAKLIIKLINSVAEVV 596 (794)
T ss_pred cCccccchhhheechhhh----HHHHHHhhhHHHHHH-HHhCCCcCCCCeE-EEEEecCCCCcHHHHHHHHHHHHHHHHh
Confidence 557778888888877744 4555 5555544431 1111110 01334 57888733222 233333333222
Q ss_pred -----CCC-CcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhcc--CCeEEE
Q 001292 480 -----LLE-HSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE--GAQVIF 549 (1106)
Q Consensus 480 -----L~d-~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~D--g~nG~L 549 (1106)
+.+ -+|+|+. .+.-...++.+|||-..-|..--|.-|..=+-+|..|.+.|++--|...|+.++ ++|+++
T Consensus 597 N~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fi 676 (794)
T TIGR02093 597 NNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFI 676 (794)
T ss_pred ccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEE
Confidence 111 1577777 346677999999999987764345788889999999999999988888888766 679988
Q ss_pred EcCCCHHHHHHH
Q 001292 550 FQKDNPEGLSRA 561 (1106)
Q Consensus 550 V~~~D~eeLAeA 561 (1106)
|- .+.++..+.
T Consensus 677 FG-~~~~ev~~~ 687 (794)
T TIGR02093 677 FG-LTVEEVEAL 687 (794)
T ss_pred cC-CCHHHHHHH
Confidence 85 345555543
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 75.3 bits (184), Expect = 1e-13
Identities = 91/734 (12%), Positives = 195/734 (26%), Gaps = 252/734 (34%)
Query: 228 ILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLI 287
I+ + S +L L + + Q+ ++ + Y
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQE-----EMVQKFVEEVL--------------RINY--- 91
Query: 288 DWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYW 347
+ + ++ ++ S+M + Q D L N
Sbjct: 92 KF------LMSPIKTEQRQPSMMTRMYIE-------QRDRLYN----------------- 121
Query: 348 KSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEK-YQLRKEN- 405
+ VF Y +V ++ Y K + +LR
Sbjct: 122 -------DNQVFAKY----------------------NVSRLQPYLKLRQALLELRPAKN 152
Query: 406 -------GFLKDEIVVVVVGS----SFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSF 454
G K + + V S ++ W + NS E
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFW-------------LNLKNCNSPETVL 199
Query: 455 KFVF-LCGNSTDGYN---DALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQ 510
+ + L + D + R+ ++ +R + LL+ V
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAK-- 257
Query: 511 VEQGFPSLIVRAMTFG--IPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSR--AFSLF- 565
A I + T + ++++ + L+ SL
Sbjct: 258 --------AWNAFNLSCKILLTTRFKQVT-DFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 566 ----ISNGKLSKFART-----VASAGRL------HAKNMLALDCVTRYARILENVLNFPS 610
L + T ++ N ++C + I+E+ LN
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNC-DKLTTIIESSLN--- 364
Query: 611 DALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEFTKN 670
L P ++ +++ ++F + +L++ W S VV+ L +
Sbjct: 365 -VLEP---AEYRKMFDRLSVFPPSAHI-PTILLSL-IWFDVIKSDVMVVVNKLH---KYS 415
Query: 671 ITENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIYRNARKS 730
+ E + + TIS + I + + L + D Y +
Sbjct: 416 LVE---KQPKESTIS------IPSIYLELKVKLENEYALHRSI-------VDHYNIPKTF 459
Query: 731 ERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFL-HHGSLYRGLALSSAARRLRSDD 789
+ D+ Y YS + HH L + +
Sbjct: 460 DSDDLIPPYLDQ------------Y-FYS------HIGHH--------LKNIE---HPER 489
Query: 790 VDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAE 849
+ + + +R F + K+ R S + +A
Sbjct: 490 MTLFRMV----FLDFR---------F-LEQKI------------------RHDSTAWNAS 517
Query: 850 KVLEETVQETEGDVMYFWAHL-DMDGGFTRNNNDVLTFWSMC--DILNGGHCR------- 899
+ T+Q + ++ ++ D D + R N +L F +++ +
Sbjct: 518 GSILNTLQ----QLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALM 573
Query: 900 ----TAFEDAFRQM 909
FE+A +Q+
Sbjct: 574 AEDEAIFEEAHKQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.9 bits (152), Expect = 6e-10
Identities = 74/537 (13%), Positives = 149/537 (27%), Gaps = 152/537 (28%)
Query: 644 NMDEWGTSTSSRNSSVVDLLEEEFTKNITENENRSADQDTISELDWDVLHDIESSEEYER 703
+MD + ++ + E+ F N D + D+ I S EE +
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNF--------DCKDVQ----DMPKSILSKEEIDH 53
Query: 704 -LEMEQLEERMDGTFASWDDIYRNARKS--ERFKFEANERDEGEL-----ERTGQPVCIY 755
+ + F + ++ ++F E + L QP +
Sbjct: 54 IIMSKDAVSGTLRLF----WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMT 109
Query: 756 EIYSGSGAWPFLHHGSLYRGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMF 815
+Y LY + + R + R LL +++L I G+
Sbjct: 110 RMYIE-------QRDRLYNDNQVFAKYNVSRLQPYLKL-RQALLELRPAKNVL--IDGVL 159
Query: 816 SIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKVLEETVQET-EGDVMYFWAHLDMDG 874
G G K +++ L VQ + + FW +L
Sbjct: 160 ---------------GS------G-KTWVALDV--CLSYKVQCKMDFKI--FWLNL---- 189
Query: 875 GFTRNNNDVLT-FWSMCDILNGGHCRTA------------FEDAFRQMYGLPSHVEALPP 921
+ VL + ++ + + R++ + L
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249
Query: 922 MPEDGGCWSALHGWVMQTPSFLEFIMFSRMFV---DS--LDALNANSSKV-----NSCLL 971
+ + +A F + ++ + D L+A ++ +S L
Sbjct: 250 L-LN--VQNA---KAWNA-----FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298
Query: 972 SSSELEK---KHCYCRVLEL---------LV------------NVWAYHSGRKMVYLDPL 1007
+ E++ K+ CR +L W K V D L
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW---KHVNCDKL 355
Query: 1008 S----GSLQEQHPIERRRGFMWMKYFN---------FTLL-KSMDEDLAEAADDGDYPR- 1052
+ SL P E R+ F + F +L+ + + + +
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS 415
Query: 1053 --EKWLWPWTGEVHWKGIYEREREERYRQKMDKKRKMKEKMFDR--LTKGYRQKTLG 1105
EK T + IY + K++ + + + D + K + L
Sbjct: 416 LVEKQPKESTISIP--SIY-----LELKVKLENEYALHRSIVDHYNIPKTFDSDDLI 465
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 8e-06
Identities = 52/375 (13%), Positives = 105/375 (28%), Gaps = 142/375 (37%)
Query: 276 ISILGQ---------EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQED 326
+SI+ + + + ++ II SL E + ++ F L +
Sbjct: 330 LSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE--PAEYRKMFDR--LS-VFPPS 384
Query: 327 SLANRLPVYVERGFQNLLSYW-KSVFSRVNVIV--FPDYTL------PMLYSVLDAGNFF 377
+ +P + L W + S V V+V Y+L S+ +
Sbjct: 385 A---HIPTIL------LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI--YL 433
Query: 378 VIPGSPADVWAVEAYSKSH----EKYQLRKE---NGFLKDEIVVVVVGSSFFYNELSWDY 430
+ + +A+ H + Y + K + + + +FY+ + +
Sbjct: 434 ELKVKLENEYAL------HRSIVDHYNIPKTFDSDDLIPPYL------DQYFYSHIG--H 479
Query: 431 AVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF 490
H +K F+ VFL D LE +RH
Sbjct: 480 ----H------LKNIEHPERMTLFRMVFL---------D--------FRFLEQKIRHDST 512
Query: 491 NGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVI 548
+ +G +L + + Y K Y+ +
Sbjct: 513 AWNASGSILNTLQQLKFY-------------------------------KPYICD----- 536
Query: 549 FFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNF 608
E L A F+ +N++ ++Y +L L
Sbjct: 537 --NDPKYERLVNAILDFLPK----------------IEENLI----CSKYTDLLRIALMA 574
Query: 609 PSDALLPGPISQLQQ 623
+A+ Q+Q+
Sbjct: 575 EDEAIFEEAHKQVQR 589
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 7e-11
Identities = 42/216 (19%), Positives = 82/216 (37%), Gaps = 24/216 (11%)
Query: 394 KSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGS 453
+ QL+KE G + E +++ + + V +++ + E
Sbjct: 194 FKRDMTQLKKEYGISESEKILIHISN------FRKVKRV------QDVVQAFAKIVTEVD 241
Query: 454 FKFVFLCGNSTDG-YNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVE 512
K + L G DG + ++ L + E V G +V +L M+D++L S+ E
Sbjct: 242 AKLL-LVG---DGPEFCTILQLVKNLHI-EDRVLFLGKQDNVAELLAMSDLMLL-LSEKE 295
Query: 513 QGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLS 572
F +++ AM G+P I I E + G + + G++ + + +L
Sbjct: 296 -SFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEEL- 353
Query: 573 KFARTVASAGRLHAKNMLALD-CVTRYARILENVLN 607
R + R + V++Y I +VL
Sbjct: 354 --HRNMGERARESVYEQFRSEKIVSQYETIYYDVLR 387
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 2e-09
Identities = 46/240 (19%), Positives = 96/240 (40%), Gaps = 26/240 (10%)
Query: 371 LDAGNFFVIP-GSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD 429
+ F ++P G D E + + R++NG + + +++ VGS F + D
Sbjct: 157 TEPERFQILPPGIYPDRKYSEQ--IPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGV--D 212
Query: 430 YAV-AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY 488
++ A+ L + R N +F+ G + +A +LG+ +V +
Sbjct: 213 RSIEAL----ASLPESLRHN------TLLFVVG---QDKPRKFEALAEKLGV-RSNVHFF 258
Query: 489 GFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQ-V 547
DV+ ++ AD++L+ + E +++ A+T G+PV+T Y+A+
Sbjct: 259 SGRNDVSELMAAADLLLH-PAYQE-AAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGT 316
Query: 548 IFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 607
+ + + E L+ ++ L A R +A + A I+ L+
Sbjct: 317 VIAEPFSQEQLNEVLRKALTQSPL---RMAWAENARHYADTQDLYSLPEKAADIITGGLD 373
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 2e-06
Identities = 19/121 (15%), Positives = 45/121 (37%), Gaps = 9/121 (7%)
Query: 469 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADI-VLYGSSQVEQGFPSLIVRAMTFGI 527
++ +A +LG+ + N ++ +L + V ++ VE + A++ GI
Sbjct: 45 KKIKLLAQKLGV-KAEFGFVNSN-ELLEILKTCTLYVH--AANVE-SEAIACLEAISVGI 99
Query: 528 PVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAK 587
+ + P+ + F+ +N + LS ++ N + + A
Sbjct: 100 VPVIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWWLENKLE---RERMQNEYAKSAL 156
Query: 588 N 588
N
Sbjct: 157 N 157
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 7e-06
Identities = 39/300 (13%), Positives = 93/300 (31%), Gaps = 42/300 (14%)
Query: 317 IPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNF 376
P +W D + R F L + + R + P+Y P L D
Sbjct: 148 SPWLWRCHIDLSSP------NREFWEFLRRFVEKYDRY-IFHLPEYVQPEL----DRNKA 196
Query: 377 FVIP-GSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMH 435
++P ++ + + ++ ++ V +
Sbjct: 197 VIMPPSIDPLSEKNVELKQTEILR-ILERFDVDPEKPIITQVSR------FDPWKGI--- 246
Query: 436 DVGPLLIK-YARRNSVEGSFKFVFLCGNSTDG------YNDALQEVASRLGLLEHSVRHY 488
+I+ Y + + + + + D + L+++ +
Sbjct: 247 ---FDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVL-TNLI 302
Query: 489 GFNG-DVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQV 547
G + +VN +D++L S + +GF + AM G PVI IK + +G
Sbjct: 303 GVHAREVNAFQRASDVILQMS--IREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETG 360
Query: 548 IFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALD-CVTRYARILENVL 606
+ + + ++ ++ + + + + + + RY IL ++
Sbjct: 361 FLV--RDANEAVEVVLYLLKHPEV---SKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 2e-04
Identities = 32/158 (20%), Positives = 56/158 (35%), Gaps = 17/158 (10%)
Query: 469 DALQEVASRLGLLEHSVRHYGF--NGDVNGVLLMADIVL------YGSSQVEQGFPSLIV 520
L+ +A+ + +V+ G D+ L ADI G VE G + +
Sbjct: 242 STLRRLATDVS---QNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVE-GLGIVYL 297
Query: 521 RAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVAS 580
A G+PVI E V ++ D + LS + + + +
Sbjct: 298 EAQACGVPVIAGTSGGAPETVTPATGLVVEGSD-VDKLSELLIELLDDPIR---RAAMGA 353
Query: 581 AGRLHAKNMLALDCVT-RYARILENVLNFPSDALLPGP 617
AGR H + + + + R IL++ + AL
Sbjct: 354 AGRAHVEAEWSWEIMGERLTNILQSEPRKLAAALEHHH 391
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 7e-04
Identities = 17/124 (13%), Positives = 37/124 (29%), Gaps = 5/124 (4%)
Query: 481 LEHSVRHYGF--NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK 538
+ G D +L + I + +P L FG+ VIT + K
Sbjct: 293 KGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPL--EMAHFGLRVITNKYE-NK 349
Query: 539 EYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRY 598
+ + ++ ++ NPE ++ + + +S + +
Sbjct: 350 DLSNWHSNIVSLEQLNPENIAETLVELCMSFNNRDVDKKESSNMMFYINEFNEFSFIKEI 409
Query: 599 ARIL 602
L
Sbjct: 410 EEKL 413
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1106 | |||
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.98 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.97 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.97 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.97 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.94 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.94 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.93 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.93 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.92 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.92 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.91 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.9 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.89 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.89 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.87 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.86 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.84 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.82 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.77 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.74 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.73 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.69 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.66 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.65 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.62 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.61 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.58 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.54 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.53 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.49 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.4 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.21 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.2 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.15 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 98.96 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.92 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 98.91 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 98.83 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 98.76 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.69 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 97.85 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 97.82 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 97.79 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 97.77 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 97.05 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 96.89 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 96.86 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 96.61 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 96.57 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 96.44 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 95.96 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 95.37 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 94.37 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 88.32 | |
| 1k68_A | 140 | Phytochrome response regulator RCPA; phosphorylate | 84.99 | |
| 3kht_A | 144 | Response regulator; PSI-II, 11023K, structural gen | 83.65 | |
| 3heb_A | 152 | Response regulator receiver domain protein (CHEY); | 83.5 | |
| 2zay_A | 147 | Response regulator receiver protein; structural ge | 83.23 | |
| 3cg4_A | 142 | Response regulator receiver domain protein (CHEY-; | 82.05 | |
| 3h1g_A | 129 | Chemotaxis protein CHEY homolog; sulfate-bound CHE | 81.59 | |
| 3jte_A | 143 | Response regulator receiver protein; structural ge | 80.59 | |
| 1qkk_A | 155 | DCTD, C4-dicarboxylate transport transcriptional r | 80.28 | |
| 1k66_A | 149 | Phytochrome response regulator RCPB; CHEY homologu | 80.23 |
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=332.03 Aligned_cols=354 Identities=13% Similarity=0.109 Sum_probs=275.6
Q ss_pred CCCEEEEEeCCCC---CChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch-------------------------------
Q 001292 221 RPPRIGLILGNMA---KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH------------------------------- 266 (1106)
Q Consensus 221 r~~RIalVlg~L~---~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~------------------------------- 266 (1106)
|++||++|+..+. .||.+..+..++++|+++||+|+|++.......
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 5789999998854 499999999999999999999999995322110
Q ss_pred ----------------H-HHH---HHhHHHHHhh-----ccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q 001292 267 ----------------S-LWE---QIAGQISILG-----QEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVW 321 (1106)
Q Consensus 267 ----------------~-i~r---~lg~lvkiIr-----~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~ 321 (1106)
. ..+ ........++ ..++|+||++.+...++..+..+. .++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~----------~~~~~v~ 150 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY----------FKIPAVF 150 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHH----------HCCCEEE
T ss_pred cchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhc----------cCCCEEE
Confidence 0 111 1111223333 459999999988877766666543 5799999
Q ss_pred EEcCCcccccchhhh-hhhHH-----hHHHHHHHHhccccEEEecCCChhhhhc---CCCCCCEEEeCCCCCCccccccc
Q 001292 322 IIQEDSLANRLPVYV-ERGFQ-----NLLSYWKSVFSRVNVIVFPDYTLPMLYS---VLDAGNFFVIPGSPADVWAVEAY 392 (1106)
Q Consensus 322 tIHna~Ls~r~~~Y~-~~gle-----klis~~~~~l~~AD~VIa~S~~~~~~~~---gi~~~KI~VIpN~GVDl~~~e~F 392 (1106)
++|+.........+. ...+. .........++.+|.+++.|........ ..+..++.+||| |+|. +.|
T Consensus 151 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~n-gvd~---~~~ 226 (439)
T 3fro_A 151 TIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFN-GIDC---SFW 226 (439)
T ss_dssp EESCCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCC-CCCT---TTS
T ss_pred EecccccccCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCC-CCCc---hhc
Confidence 999964221111000 00000 0001223457799999999976655522 367789999998 8998 566
Q ss_pred Ccc-------hhHHHHHHHcCCCCCcEEEEEEcccC-ccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCC
Q 001292 393 SKS-------HEKYQLRKENGFLKDEIVVVVVGSSF-FYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNST 464 (1106)
Q Consensus 393 ~ps-------~s~~~LR~~lGL~~d~~VIL~VGRl~-~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gp 464 (1106)
.+. ..+..++++++++++ ++|+++|++. . .||++.+++|++.+.++ ...++++ |+|+|.++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~----~Kg~~~li~a~~~l~~~-----~~~~~~~-l~i~G~g~ 295 (439)
T 3fro_A 227 NESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRG----QKGVDVLLKAIEILSSK-----KEFQEMR-FIIIGKGD 295 (439)
T ss_dssp CGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCT----TBCHHHHHHHHHHHHTS-----GGGGGEE-EEEECCCC
T ss_pred CcccccchhhhhHHHHHHHcCCCCC-cEEEEEcccccc----cccHHHHHHHHHHHHhc-----ccCCCeE-EEEEcCCC
Confidence 543 246778999999877 9999999988 7 89999999999877531 1116787 68999999
Q ss_pred CccHHHHHHHHHHcCCCCCcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhc
Q 001292 465 DGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVA 542 (1106)
Q Consensus 465 erY~eeLkeLaeklGL~d~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~ 542 (1106)
..|.+.+++++++++ + .|.|.| +.+++..+|+.||++|+||..| +||++++||||||+|||+++.+++.|++.
T Consensus 296 ~~~~~~l~~~~~~~~--~-~~~~~g~~~~~~~~~~~~~adv~v~ps~~e--~~~~~~~EAma~G~Pvi~s~~~~~~e~~~ 370 (439)
T 3fro_A 296 PELEGWARSLEEKHG--N-VKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGAIPIASAVGGLRDIIT 370 (439)
T ss_dssp HHHHHHHHHHHHHCT--T-EEEECSCCCHHHHHHHHTTCSEEEECBSCC--SSCHHHHHHHHTTCEEEEESSTHHHHHCC
T ss_pred hhHHHHHHHHHhhcC--C-EEEEcCCCCHHHHHHHHHHCCEEEeCCCCC--CccHHHHHHHHCCCCeEEcCCCCcceeEE
Confidence 777799999999888 4 899999 5688999999999999999986 99999999999999999999999999998
Q ss_pred cCCeEEEEcCCCHHHHHHHHHHHHh-CcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC
Q 001292 543 EGAQVIFFQKDNPEGLSRAFSLFIS-NGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNF 608 (1106)
Q Consensus 543 Dg~nG~LV~~~D~eeLAeAI~~LLs-DpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk~ 608 (1106)
++ +|++++++|+++|+++|.++++ |++. +.+|++++++.++++.|+..+++|.++|+++++.
T Consensus 371 ~~-~g~~~~~~d~~~la~~i~~ll~~~~~~---~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 371 NE-TGILVKAGDPGELANAILKALELSRSD---LSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp TT-TCEEECTTCHHHHHHHHHHHHHHTTTT---THHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCC
T ss_pred cC-ceEEeCCCCHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHh
Confidence 87 9999999999999999999999 8888 5899999999997777788888999999998764
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-34 Score=321.77 Aligned_cols=360 Identities=18% Similarity=0.198 Sum_probs=269.8
Q ss_pred CCCCCCEEEEEeCCCC---------CChhHHHHHHHHHHHHHCCCEEEEEEcCCCCc-----------------------
Q 001292 218 FGVRPPRIGLILGNMA---------KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS----------------------- 265 (1106)
Q Consensus 218 ~g~r~~RIalVlg~L~---------~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~----------------------- 265 (1106)
.+.+.+||++|...+. .||.+..+..++++|.++||+|+|++...+..
T Consensus 16 ~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~ 95 (438)
T 3c48_A 16 PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEG 95 (438)
T ss_dssp ---CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSS
T ss_pred cCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCccc
Confidence 3556689999998764 38999999999999999999999998754210
Q ss_pred ---hHHH----HHHhHHHHH-hhcc-CccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchh--
Q 001292 266 ---HSLW----EQIAGQISI-LGQE-QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPV-- 334 (1106)
Q Consensus 266 ---~~i~----r~lg~lvki-Ir~~-~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~-- 334 (1106)
...+ .....+.+. ++.. ++|+||.+.+...++..+..+. .++|+|+++|+.........
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~----------~~~p~v~~~h~~~~~~~~~~~~ 165 (438)
T 3c48_A 96 LSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDL----------WRIPLIHTAHTLAAVKNSYRDD 165 (438)
T ss_dssp CCGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHH----------HTCCEEEECSSCHHHHSCC---
T ss_pred cchhHHHHHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHH----------cCCCEEEEecCCcccccccccc
Confidence 0001 011112222 3333 4999999876655554444432 47899999999532111000
Q ss_pred --hhhhhHHhHHHHHHHHhccccEEEecCCChhhh---hcCCCCCCEEEeCCCCCCcccccccCcch--hHHHHHHHcCC
Q 001292 335 --YVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSH--EKYQLRKENGF 407 (1106)
Q Consensus 335 --Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~ps~--s~~~LR~~lGL 407 (1106)
........ ......++.+|.|++.+...... ..+++..++.+||| |+|. +.|.+.. ....+|+++++
T Consensus 166 ~~~~~~~~~~--~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~n-gvd~---~~~~~~~~~~~~~~r~~~~~ 239 (438)
T 3c48_A 166 SDTPESEARR--ICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSP-GADV---ELYSPGNDRATERSRRELGI 239 (438)
T ss_dssp -CCHHHHHHH--HHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCC-CCCT---TTSCCC----CHHHHHHTTC
T ss_pred cCCcchHHHH--HHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecC-Cccc---cccCCcccchhhhhHHhcCC
Confidence 00000011 11234578899999999766554 25677789999998 7987 5565532 22347889999
Q ss_pred CCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcC----CCCccHHHHHHHHHHcCCCCC
Q 001292 408 LKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN----STDGYNDALQEVASRLGLLEH 483 (1106)
Q Consensus 408 ~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~----GperY~eeLkeLaeklGL~d~ 483 (1106)
+++.++|+++|++.. .||++.+++|+..+.++. .+.+++ |+|+|. |+.. +.++++++++++.+
T Consensus 240 ~~~~~~i~~~G~~~~----~Kg~~~li~a~~~l~~~~-----p~~~~~-l~i~G~~~~~g~~~--~~l~~~~~~~~l~~- 306 (438)
T 3c48_A 240 PLHTKVVAFVGRLQP----FKGPQVLIKAVAALFDRD-----PDRNLR-VIICGGPSGPNATP--DTYRHMAEELGVEK- 306 (438)
T ss_dssp CSSSEEEEEESCBSG----GGCHHHHHHHHHHHHHHC-----TTCSEE-EEEECCBC--------CHHHHHHHHTTCTT-
T ss_pred CCCCcEEEEEeeecc----cCCHHHHHHHHHHHHhhC-----CCcceE-EEEEeCCCCCCcHH--HHHHHHHHHcCCCC-
Confidence 889999999999887 899999999998886432 012677 688898 6644 89999999999987
Q ss_pred cEEEcCCh--hhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHH
Q 001292 484 SVRHYGFN--GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRA 561 (1106)
Q Consensus 484 rV~flG~~--eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeA 561 (1106)
+|.|+|+. +++..+|+.||++|+||..| +||++++||||||+|||+++.+++.|++.++.+|+++++.|+++|+++
T Consensus 307 ~v~~~g~~~~~~~~~~~~~adv~v~ps~~e--~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~ 384 (438)
T 3c48_A 307 RIRFLDPRPPSELVAVYRAADIVAVPSFNE--SFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADA 384 (438)
T ss_dssp TEEEECCCCHHHHHHHHHHCSEEEECCSCC--SSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHH
T ss_pred cEEEcCCCChHHHHHHHHhCCEEEECcccc--CCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHH
Confidence 99999976 78999999999999999886 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCC
Q 001292 562 FSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSD 611 (1106)
Q Consensus 562 I~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk~Ps~ 611 (1106)
|.++++|+++ +.+|++++++.++++.|+..+++|.++|++++..+..
T Consensus 385 i~~l~~~~~~---~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T 3c48_A 385 LATLLDDDET---RIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENV 431 (438)
T ss_dssp HHHHHHCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHcCHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhccc
Confidence 9999999987 6889999999999965677777999999999886543
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=318.22 Aligned_cols=339 Identities=12% Similarity=0.118 Sum_probs=258.9
Q ss_pred CCCCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCc-hHH--------------------HHH----HhH
Q 001292 220 VRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS-HSL--------------------WEQ----IAG 274 (1106)
Q Consensus 220 ~r~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~-~~i--------------------~r~----lg~ 274 (1106)
.+++||+++.+....||.+..+..+++.|.+.||+|++++...... ... +.. ...
T Consensus 38 ~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (416)
T 2x6q_A 38 LKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLTEEMKELYLNVNRE 117 (416)
T ss_dssp TTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHHH
T ss_pred hhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhhhhcccceeecccccccccHHHHHHHHHHHHH
Confidence 4678999999998889999999999999999999999988764321 000 000 001
Q ss_pred HHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccc
Q 001292 275 QISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRV 354 (1106)
Q Consensus 275 lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~A 354 (1106)
+.+.++..++|+||++.+....+..+. ...+|+|+++|+....... .........+..+
T Consensus 118 ~~~~l~~~~~Dvv~~~~~~~~~~~~~~------------~~~~p~v~~~h~~~~~~~~---------~~~~~~~~~~~~~ 176 (416)
T 2x6q_A 118 NSKFIDLSSFDYVLVHDPQPAALIEFY------------EKKSPWLWRCHIDLSSPNR---------EFWEFLRRFVEKY 176 (416)
T ss_dssp HHHSSCGGGSSEEEEESSTTGGGGGGS------------CCCSCEEEECCSCCSSCCH---------HHHHHHHHHHTTS
T ss_pred HHHHHhhcCCCEEEEeccchhhHHHHH------------HhcCCEEEEEccccCCccH---------HHHHHHHHHHHhC
Confidence 233455668999999876543222111 1348999999985322110 1111123345677
Q ss_pred cEEEe-cCCChhhhhcCCCCCCEEEeCCCCCCcccccccCc----chhHHHHHHHcCCCCCcEEEEEEcccCccccccCC
Q 001292 355 NVIVF-PDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSK----SHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD 429 (1106)
Q Consensus 355 D~VIa-~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~p----s~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg 429 (1106)
|.+++ .+.... ..++..++.+||| |+|. ..+.+ ......+|++++++++.++|+++||+.+ .||
T Consensus 177 ~~~i~~~s~~~~---~~~~~~~~~vi~n-gvd~---~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vGrl~~----~Kg 245 (416)
T 2x6q_A 177 DRYIFHLPEYVQ---PELDRNKAVIMPP-SIDP---LSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDP----WKG 245 (416)
T ss_dssp SEEEESSGGGSC---TTSCTTTEEECCC-CBCT---TSTTTSCCCHHHHHHHHHHTTCCTTSCEEEEECCCCT----TSC
T ss_pred CEEEEechHHHH---hhCCccceEEeCC-CCCh---hhhcccccChhhHHHHHHHhCCCCCCcEEEEEecccc----ccC
Confidence 77664 443222 2345578999998 7987 33332 1245678899999989999999999887 899
Q ss_pred HHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCc---cHHHHHHHHHHcCCCCCcEEEcCCh-----hhHHHHHHHc
Q 001292 430 YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG---YNDALQEVASRLGLLEHSVRHYGFN-----GDVNGVLLMA 501 (1106)
Q Consensus 430 ~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gper---Y~eeLkeLaeklGL~d~rV~flG~~-----eDL~~LyaaA 501 (1106)
++.+++|++.+.++ .|+++ |+|+|+++.. +.+.++++++++++.+ +|.|+|+. +++..+|+.|
T Consensus 246 ~~~li~a~~~l~~~-------~~~~~-l~i~G~g~~~~~~~~~~l~~~~~~~~~~~-~V~~~G~~~~~~~~~~~~~~~~a 316 (416)
T 2x6q_A 246 IFDVIEIYRKVKEK-------IPGVQ-LLLVGVMAHDDPEGWIYFEKTLRKIGEDY-DVKVLTNLIGVHAREVNAFQRAS 316 (416)
T ss_dssp HHHHHHHHHHHHHH-------CTTCE-EEEEECCCTTCHHHHHHHHHHHHHHTTCT-TEEEEEGGGTCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-------CCCeE-EEEEecCcccchhHHHHHHHHHHHhCCCC-cEEEecccCCCCHHHHHHHHHhC
Confidence 99999999887643 27888 6889998742 2467899999999987 99999954 3899999999
Q ss_pred CeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHH
Q 001292 502 DIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASA 581 (1106)
Q Consensus 502 DVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~ 581 (1106)
|++|+||..| +||++++||||||+|||+++.++++|++.++.+|++++ |+++|+++|..+++|++. +++|+++
T Consensus 317 d~~v~ps~~E--~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~~~~---~~~~~~~ 389 (416)
T 2x6q_A 317 DVILQMSIRE--GFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKHPEV---SKEMGAK 389 (416)
T ss_dssp SEEEECCSSC--SSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHHHCHHH---HHHHHHH
T ss_pred CEEEECCCcC--CCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHHhCHHH---HHHHHHH
Confidence 9999999986 99999999999999999999999999999999999997 999999999999999987 6889999
Q ss_pred HHHHHHH-hcHHHHHHHHHHHHHHHh
Q 001292 582 GRLHAKN-MLALDCVTRYARILENVL 606 (1106)
Q Consensus 582 Are~ake-~fsee~v~~Y~eLyeslL 606 (1106)
+++.+.+ +.|+..+.+|.++|++++
T Consensus 390 a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 390 AKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 9999975 456677779999998765
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=312.57 Aligned_cols=349 Identities=13% Similarity=0.122 Sum_probs=268.1
Q ss_pred CCCEEEEEeCCCC--CChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch-HH--------------------HHHHhHHHH
Q 001292 221 RPPRIGLILGNMA--KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-SL--------------------WEQIAGQIS 277 (1106)
Q Consensus 221 r~~RIalVlg~L~--~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~-~i--------------------~r~lg~lvk 277 (1106)
+++||++|.+.+. .||.+..+..+++.| .|++|+|++....... .. ......+.+
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPTPTTAHAMAE 80 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCSCHHHHHHHHH
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccccchhhHHHHHH
Confidence 4689999999776 599999999999999 6999999998654320 11 112233677
Q ss_pred HhhccCccEEEEccccHHH-HHHHHHHHhhhhcccCCCCCCc-EEEEEcCCcccccchhhhhhhHHhHHHHHHHHhcccc
Q 001292 278 ILGQEQYSLIDWSIFDGII-ADSLEAKEAISSLMQEPFHSIP-LVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVN 355 (1106)
Q Consensus 278 iIr~~~pDiIh~~~~~~i~-v~~La~k~~idII~te~~~gIP-VI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD 355 (1106)
+++..++|+||++...... +..+..+ .++| +|+++|+...... .. ..........++.+|
T Consensus 81 ~~~~~~~Dvv~~~~~~~~~~~~~~~~~-----------~~~~~~i~~~h~~~~~~~-~~------~~~~~~~~~~~~~~d 142 (394)
T 3okp_A 81 IIREREIDNVWFGAAAPLALMAGTAKQ-----------AGASKVIASTHGHEVGWS-ML------PGSRQSLRKIGTEVD 142 (394)
T ss_dssp HHHHTTCSEEEESSCTTGGGGHHHHHH-----------TTCSEEEEECCSTHHHHT-TS------HHHHHHHHHHHHHCS
T ss_pred HHHhcCCCEEEECCcchHHHHHHHHHh-----------cCCCcEEEEeccchhhhh-hc------chhhHHHHHHHHhCC
Confidence 7888899999997654432 2223221 4565 8889998633111 00 111112334678999
Q ss_pred EEEecCCChhhhh--cCCCCCCEEEeCCCCCCcccccccCc-c-hhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHH
Q 001292 356 VIVFPDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAYSK-S-HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA 431 (1106)
Q Consensus 356 ~VIa~S~~~~~~~--~gi~~~KI~VIpN~GVDl~~~e~F~p-s-~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~d 431 (1106)
.+++.|....... ......++.+||| |+|. +.|.+ . .....+++.++++++.++|+++|++.. .||++
T Consensus 143 ~ii~~s~~~~~~~~~~~~~~~~~~vi~n-gv~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~----~Kg~~ 214 (394)
T 3okp_A 143 VLTYISQYTLRRFKSAFGSHPTFEHLPS-GVDV---KRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVP----RKGQD 214 (394)
T ss_dssp EEEESCHHHHHHHHHHHCSSSEEEECCC-CBCT---TTSCCCCHHHHHHHHHHTTCCTTCCEEEEESCSCG----GGCHH
T ss_pred EEEEcCHHHHHHHHHhcCCCCCeEEecC-CcCH---HHcCCCCchhhHHHHHhcCCCcCceEEEEEecccc----ccCHH
Confidence 9999997666552 1224578999998 7998 66665 3 345778999999988899999999877 89999
Q ss_pred HHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccC
Q 001292 432 VAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSS 509 (1106)
Q Consensus 432 lLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~ 509 (1106)
.+++|++.+.++ +|+++ |+|+|+++.. +.+++++ .++.+ +|.|+|+. +++..+|+.||++|+||.
T Consensus 215 ~li~a~~~l~~~-------~~~~~-l~i~G~g~~~--~~l~~~~--~~~~~-~v~~~g~~~~~~~~~~~~~ad~~v~ps~ 281 (394)
T 3okp_A 215 SLIKAMPQVIAA-------RPDAQ-LLIVGSGRYE--STLRRLA--TDVSQ-NVKFLGRLEYQDMINTLAAADIFAMPAR 281 (394)
T ss_dssp HHHHHHHHHHHH-------STTCE-EEEECCCTTH--HHHHHHT--GGGGG-GEEEEESCCHHHHHHHHHHCSEEEECCC
T ss_pred HHHHHHHHHHhh-------CCCeE-EEEEcCchHH--HHHHHHH--hcccC-eEEEcCCCCHHHHHHHHHhCCEEEecCc
Confidence 999999887643 27888 6889999865 8888888 57766 99999977 899999999999999999
Q ss_pred C-------CCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHH
Q 001292 510 Q-------VEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAG 582 (1106)
Q Consensus 510 ~-------EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~A 582 (1106)
. | +||++++||||+|+|||+++.+++.|++.++ +|++++++|+++|+++|.++++|++. +.++++++
T Consensus 282 ~~~~~~~~e--~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~~~~---~~~~~~~~ 355 (394)
T 3okp_A 282 TRGGGLDVE--GLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDDPIR---RAAMGAAG 355 (394)
T ss_dssp CBGGGTBCC--SSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTCHHH---HHHHHHHH
T ss_pred ccccccccc--ccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHHhCHHH---HHHHHHHH
Confidence 8 6 9999999999999999999999999999998 99999999999999999999999987 68999999
Q ss_pred HHHHHHh-cHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 001292 583 RLHAKNM-LALDCVTRYARILENVLNFPSDALLPG 616 (1106)
Q Consensus 583 re~ake~-fsee~v~~Y~eLyeslLk~Ps~a~~P~ 616 (1106)
++.+.+. .|+..+.+|.++|+++.........|.
T Consensus 356 ~~~~~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~~ 390 (394)
T 3okp_A 356 RAHVEAEWSWEIMGERLTNILQSEPRKLAAALEHH 390 (394)
T ss_dssp HHHHHHHTBHHHHHHHHHHHHHSCCC---------
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHhccCcchhhhhh
Confidence 9999875 566777799999999877665555554
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=324.09 Aligned_cols=360 Identities=11% Similarity=0.077 Sum_probs=271.7
Q ss_pred CCEEEEEeCCC-------------CCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch----------------------
Q 001292 222 PPRIGLILGNM-------------AKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH---------------------- 266 (1106)
Q Consensus 222 ~~RIalVlg~L-------------~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~---------------------- 266 (1106)
++||++|.... ..||.+..+..++++|.++||+|+|++.......
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 86 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRI 86 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEe
Confidence 57999999764 4589999999999999999999999986432100
Q ss_pred -----------HHHH----HHhHHHHHhhc--cCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccc
Q 001292 267 -----------SLWE----QIAGQISILGQ--EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLA 329 (1106)
Q Consensus 267 -----------~i~r----~lg~lvkiIr~--~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls 329 (1106)
..+. ....+.++++. .++|+||.|.+...++..+..+. .++|+|+++|+....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~----------~~~p~v~~~H~~~~~ 156 (499)
T 2r60_A 87 PFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNI----------KGLPFTFTGHSLGAQ 156 (499)
T ss_dssp CCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHH----------HCCCEEEECSSCHHH
T ss_pred cCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHh----------cCCcEEEEccCcccc
Confidence 0111 11124455665 48999999987655555444432 478999999995321
Q ss_pred ccchh-------hhhhhHH---hHHHHHHHHhccccEEEecCCChhhhh-----cC-C----CCCCEEEeCCCCCCcccc
Q 001292 330 NRLPV-------YVERGFQ---NLLSYWKSVFSRVNVIVFPDYTLPMLY-----SV-L----DAGNFFVIPGSPADVWAV 389 (1106)
Q Consensus 330 ~r~~~-------Y~~~gle---klis~~~~~l~~AD~VIa~S~~~~~~~-----~g-i----~~~KI~VIpN~GVDl~~~ 389 (1106)
..... ....... .........++.+|.|+++|....... .+ + +..++.|||| |+|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~n-gvd~--- 232 (499)
T 2r60_A 157 KMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPP-GVNT--- 232 (499)
T ss_dssp HHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCC-CBCT---
T ss_pred cchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECC-CcCh---
Confidence 10000 0000000 011112346789999999997766542 23 4 5678999998 7997
Q ss_pred cccCcch---hHHHHHHHcC-----CCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEc
Q 001292 390 EAYSKSH---EKYQLRKENG-----FLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCG 461 (1106)
Q Consensus 390 e~F~ps~---s~~~LR~~lG-----L~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG 461 (1106)
+.|.+.. .+..+|+++| ++++.++|+++||+.+ .||++.+++|++.+.++.. ..++ |+|+|
T Consensus 233 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~----~Kg~~~li~a~~~l~~~~~------~~~~-l~i~G 301 (499)
T 2r60_A 233 RVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQ----KKNHYGLVEAYVQNKELQD------KANL-VLTLR 301 (499)
T ss_dssp TTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCG----GGCHHHHHHHHHTCHHHHH------HCEE-EEEES
T ss_pred hhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCcc----ccCHHHHHHHHHHHHHhCC------CceE-EEEEC
Confidence 5665542 2467788888 7788899999999887 8999999999998875431 1234 68888
Q ss_pred C--CC----C-------ccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHc----CeEEEccCCCCCCCcHHHHHH
Q 001292 462 N--ST----D-------GYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMA----DIVLYGSSQVEQGFPSLIVRA 522 (1106)
Q Consensus 462 ~--Gp----e-------rY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaA----DVfV~PS~~EeEGFGlvLLEA 522 (1106)
. ++ . .|.++++++++++|+.+ +|+|+|+. +++..+|+.| |++|+||..| +||++++||
T Consensus 302 ~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~-~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~E--g~~~~~lEA 378 (499)
T 2r60_A 302 GIENPFEDYSRAGQEEKEILGKIIELIDNNDCRG-KVSMFPLNSQQELAGCYAYLASKGSVFALTSFYE--PFGLAPVEA 378 (499)
T ss_dssp SCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBT-TEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCB--CCCSHHHHH
T ss_pred CCCCcccccccccccchHHHHHHHHHHHhcCCCc-eEEECCCCCHHHHHHHHHhcCcCCCEEEECcccC--CCCcHHHHH
Confidence 8 33 1 12589999999999987 99999975 8999999999 9999999986 999999999
Q ss_pred HHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH-hcHHHHHHHHHHH
Q 001292 523 MTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKN-MLALDCVTRYARI 601 (1106)
Q Consensus 523 MA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake-~fsee~v~~Y~eL 601 (1106)
||||+|||+++.+++.|++.++.+|++++++|+++|+++|.++++|+++ +.+|++++++.+.+ +.|+..+.+|.++
T Consensus 379 ma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~~~~---~~~~~~~a~~~~~~~fs~~~~~~~~~~~ 455 (499)
T 2r60_A 379 MASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEET---WSAYQEKGKQRVEERYTWQETARGYLEV 455 (499)
T ss_dssp HHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSCHHH---HHHHHHHHHHHHHHHSBHHHHHHHHHHH
T ss_pred HHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987 68899999999988 5566777799999
Q ss_pred HHHHhcCCCCC
Q 001292 602 LENVLNFPSDA 612 (1106)
Q Consensus 602 yeslLk~Ps~a 612 (1106)
|++++......
T Consensus 456 y~~~~~~~~~~ 466 (499)
T 2r60_A 456 IQEIADRKDEE 466 (499)
T ss_dssp HHHHHHC----
T ss_pred HHHHHhhhhhh
Confidence 99998865433
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=313.16 Aligned_cols=347 Identities=15% Similarity=0.153 Sum_probs=261.0
Q ss_pred CCCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCc------------------------hHHHHHHhHHH
Q 001292 221 RPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS------------------------HSLWEQIAGQI 276 (1106)
Q Consensus 221 r~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~------------------------~~i~r~lg~lv 276 (1106)
+++++...... ..||.+..+..+++.|.++||+|+|++...... ...+.....+.
T Consensus 14 ~~~~~~~~~~p-~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 92 (394)
T 2jjm_A 14 MKLKIGITCYP-SVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYPPYDLALASKMA 92 (394)
T ss_dssp -CCEEEEECCC---CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCCC----CCSCCHHHHHHHHHH
T ss_pred heeeeehhcCC-CCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccCCceEEEecccccccccccccccHHHHHHHH
Confidence 45555544332 368999999999999999999999998743210 00111222256
Q ss_pred HHhhccCccEEEEccccHH-HHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhcccc
Q 001292 277 SILGQEQYSLIDWSIFDGI-IADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVN 355 (1106)
Q Consensus 277 kiIr~~~pDiIh~~~~~~i-~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD 355 (1106)
++++..++|+||++..... +...+..+.. ..++|+|+++|+......... . .+.......++.+|
T Consensus 93 ~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~--------~~~~p~v~~~h~~~~~~~~~~-~-----~~~~~~~~~~~~ad 158 (394)
T 2jjm_A 93 EVAQRENLDILHVHYAIPHAICAYLAKQMI--------GERIKIVTTLHGTDITVLGSD-P-----SLNNLIRFGIEQSD 158 (394)
T ss_dssp HHHHHHTCSEEEECSSTTHHHHHHHHHHHT--------TTCSEEEEECCHHHHHTTTTC-T-----TTHHHHHHHHHHSS
T ss_pred HHHHHcCCCEEEEcchhHHHHHHHHHHHhh--------cCCCCEEEEEecCcccccCCC-H-----HHHHHHHHHHhhCC
Confidence 6777789999999865543 3333333221 136899999998422100000 0 00111234567899
Q ss_pred EEEecCCChhhhh--cCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHH
Q 001292 356 VIVFPDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVA 433 (1106)
Q Consensus 356 ~VIa~S~~~~~~~--~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlL 433 (1106)
.+++.+....... ......++.+||| |+|. +.|.+. ....++++++++++.++|+++|++.. .||++.+
T Consensus 159 ~ii~~s~~~~~~~~~~~~~~~~~~vi~n-gv~~---~~~~~~-~~~~~~~~~~~~~~~~~i~~~G~~~~----~Kg~~~l 229 (394)
T 2jjm_A 159 VVTAVSHSLINETHELVKPNKDIQTVYN-FIDE---RVYFKR-DMTQLKKEYGISESEKILIHISNFRK----VKRVQDV 229 (394)
T ss_dssp EEEESCHHHHHHHHHHTCCSSCEEECCC-CCCT---TTCCCC-CCHHHHHHTTCC---CEEEEECCCCG----GGTHHHH
T ss_pred EEEECCHHHHHHHHHhhCCcccEEEecC-CccH---HhcCCc-chHHHHHHcCCCCCCeEEEEeecccc----ccCHHHH
Confidence 9999997765542 2222568999998 7987 556554 24567888999888899999999887 8999999
Q ss_pred HHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCC
Q 001292 434 MHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQ 513 (1106)
Q Consensus 434 LeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeE 513 (1106)
++|++.+.++ ++++ |+|+|+++.. +.++++++++++.+ +|.|.|+.+++..+|+.||++|+||..|
T Consensus 230 i~a~~~l~~~--------~~~~-l~i~G~g~~~--~~l~~~~~~~~l~~-~v~~~g~~~~~~~~~~~adv~v~ps~~e-- 295 (394)
T 2jjm_A 230 VQAFAKIVTE--------VDAK-LLLVGDGPEF--CTILQLVKNLHIED-RVLFLGKQDNVAELLAMSDLMLLLSEKE-- 295 (394)
T ss_dssp HHHHHHHHHS--------SCCE-EEEECCCTTH--HHHHHHHHTTTCGG-GBCCCBSCSCTHHHHHTCSEEEECCSCC--
T ss_pred HHHHHHHHhh--------CCCE-EEEECCchHH--HHHHHHHHHcCCCC-eEEEeCchhhHHHHHHhCCEEEeccccC--
Confidence 9999877531 3567 6889999865 99999999999987 9999999999999999999999999986
Q ss_pred CCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH-HHhcHH
Q 001292 514 GFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHA-KNMLAL 592 (1106)
Q Consensus 514 GFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~a-ke~fse 592 (1106)
+||++++||||||+|||+++.+++.|++.++.+|++++++|+++|+++|.++++|++. +.+|++++++.+ +++.++
T Consensus 296 ~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~~~---~~~~~~~~~~~~~~~~s~~ 372 (394)
T 2jjm_A 296 SFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEEL---HRNMGERARESVYEQFRSE 372 (394)
T ss_dssp SCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHHSCHH
T ss_pred CCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHHHhCCHH
Confidence 9999999999999999999999999999999999999999999999999999999987 688999999999 555567
Q ss_pred HHHHHHHHHHHHHhcC
Q 001292 593 DCVTRYARILENVLNF 608 (1106)
Q Consensus 593 e~v~~Y~eLyeslLk~ 608 (1106)
..+++|.++|+++++.
T Consensus 373 ~~~~~~~~~~~~~~~~ 388 (394)
T 2jjm_A 373 KIVSQYETIYYDVLRD 388 (394)
T ss_dssp HHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHhh
Confidence 7777999999998764
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=324.87 Aligned_cols=353 Identities=12% Similarity=0.072 Sum_probs=261.4
Q ss_pred CEEEEEeCCCC----CChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch--------------------------------
Q 001292 223 PRIGLILGNMA----KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-------------------------------- 266 (1106)
Q Consensus 223 ~RIalVlg~L~----~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~-------------------------------- 266 (1106)
+||++|+..+. .||.+..+..++++|.++||+|+|++.......
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 80 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecCCeEEEEEEEecCceE
Confidence 58999998774 589999999999999999999999986431100
Q ss_pred ------HHH--------------------H---HHhHHHHHh----hccCccEEEEccccHHHHHHHHHHHhhhhcccCC
Q 001292 267 ------SLW--------------------E---QIAGQISIL----GQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEP 313 (1106)
Q Consensus 267 ------~i~--------------------r---~lg~lvkiI----r~~~pDiIh~~~~~~i~v~~La~k~~idII~te~ 313 (1106)
..+ + ......+++ +..++|+||+|.+...++..+..+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~-------- 152 (485)
T 1rzu_A 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAE-------- 152 (485)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSS--------
T ss_pred EEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchhHHHHHHhhcc--------
Confidence 000 0 001122233 46789999999866554544444210
Q ss_pred CCCCcEEEEEcCCcccccchhh-------hhh-----hH--HhHHHHHHHHhccccEEEecCCChhhhhc----C-----
Q 001292 314 FHSIPLVWIIQEDSLANRLPVY-------VER-----GF--QNLLSYWKSVFSRVNVIVFPDYTLPMLYS----V----- 370 (1106)
Q Consensus 314 ~~gIPVI~tIHna~Ls~r~~~Y-------~~~-----gl--eklis~~~~~l~~AD~VIa~S~~~~~~~~----g----- 370 (1106)
..++|+|+++|+.......... +.. .. .......+..++.+|.++++|........ +
T Consensus 153 ~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~ 232 (485)
T 1rzu_A 153 TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEG 232 (485)
T ss_dssp SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHH
T ss_pred cCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHHHHhccccCcchHH
Confidence 2579999999995321110000 000 00 00001123456789999999976655421 2
Q ss_pred ---CCCCCEEEeCCCCCCcccccccCcch------------------hHHHHHHHcCCCCC-cEEEEEEcccCccccccC
Q 001292 371 ---LDAGNFFVIPGSPADVWAVEAYSKSH------------------EKYQLRKENGFLKD-EIVVVVVGSSFFYNELSW 428 (1106)
Q Consensus 371 ---i~~~KI~VIpN~GVDl~~~e~F~ps~------------------s~~~LR~~lGL~~d-~~VIL~VGRl~~y~kg~K 428 (1106)
.+..++.+||| |+|. +.|.+.. .+..+|+++|++++ .++|+++||+.+ .|
T Consensus 233 ~~~~~~~~~~vi~n-gvd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~----~K 304 (485)
T 1rzu_A 233 VIGSRAHVLHGIVN-GIDA---DVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTW----QK 304 (485)
T ss_dssp HHHTTGGGEEECCC-CBCT---TTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBST----TT
T ss_pred HHHhhcCCceEEcC-CCcc---cccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCcc----cc
Confidence 35678999998 8997 5565542 25678899999875 779999999988 89
Q ss_pred CHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEE-EcCChhh-HHHHHHHcCeEEE
Q 001292 429 DYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVR-HYGFNGD-VNGVLLMADIVLY 506 (1106)
Q Consensus 429 g~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~-flG~~eD-L~~LyaaADVfV~ 506 (1106)
|++.+++|+..+.+ ++++ |+|+|+++..|.+.+++++++++ + +|. +.|...+ +..+|+.||++|+
T Consensus 305 g~~~li~a~~~l~~---------~~~~-l~ivG~g~~~~~~~l~~~~~~~~--~-~v~~~~g~~~~~~~~~~~~adv~v~ 371 (485)
T 1rzu_A 305 GIDLMAEAVDEIVS---------LGGR-LVVLGAGDVALEGALLAAASRHH--G-RVGVAIGYNEPLSHLMQAGCDAIII 371 (485)
T ss_dssp THHHHHTTHHHHHH---------TTCE-EEEEECBCHHHHHHHHHHHHHTT--T-TEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred CHHHHHHHHHHHHh---------cCce-EEEEeCCchHHHHHHHHHHHhCC--C-cEEEecCCCHHHHHHHHhcCCEEEE
Confidence 99999999987753 3677 68899987545688999999875 4 787 7897655 5899999999999
Q ss_pred ccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccC---------CeEEEEcCCCHHHHHHHHHHHH---hCcccHHH
Q 001292 507 GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEG---------AQVIFFQKDNPEGLSRAFSLFI---SNGKLSKF 574 (1106)
Q Consensus 507 PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg---------~nG~LV~~~D~eeLAeAI~~LL---sDpelRk~ 574 (1106)
||..| +||++++||||||+|||+++.+|++|++.++ .+|+++++.|+++|+++|.+++ +|+++
T Consensus 372 pS~~E--~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~--- 446 (485)
T 1rzu_A 372 PSRFE--PCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKL--- 446 (485)
T ss_dssp CCSCC--SSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHH---
T ss_pred CcccC--CCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHH---
Confidence 99986 9999999999999999999999999999998 8999999999999999999999 78877
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCC
Q 001292 575 ARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSD 611 (1106)
Q Consensus 575 r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk~Ps~ 611 (1106)
+.+|++++++ +++.|+..+.+|.++|++++..+..
T Consensus 447 ~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~~~~~~ 481 (485)
T 1rzu_A 447 WTQMQKLGMK--SDVSWEKSAGLYAALYSQLISKGHH 481 (485)
T ss_dssp HHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHH--HhCChHHHHHHHHHHHHHhhCCCCC
Confidence 5888888875 5566777778999999999876544
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-33 Score=321.24 Aligned_cols=350 Identities=13% Similarity=0.057 Sum_probs=259.4
Q ss_pred CEEEEEeCCC----CCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch--------------------------------
Q 001292 223 PRIGLILGNM----AKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-------------------------------- 266 (1106)
Q Consensus 223 ~RIalVlg~L----~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~-------------------------------- 266 (1106)
+||++|+..+ ..||.+..+..|+++|.++||+|+|++.......
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 80 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCCcEEEEEEEECCcEEE
Confidence 5899999877 3589999999999999999999999986421100
Q ss_pred -----HHH--------------------H---HHhHHHHHhhc----cCccEEEEccccHHHHHHHHHHHhhhhcccCCC
Q 001292 267 -----SLW--------------------E---QIAGQISILGQ----EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPF 314 (1106)
Q Consensus 267 -----~i~--------------------r---~lg~lvkiIr~----~~pDiIh~~~~~~i~v~~La~k~~idII~te~~ 314 (1106)
..+ + ....+.++++. .++|+||+|.+...++..+... . .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~-~--------~ 151 (485)
T 2qzs_A 81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAA-R--------G 151 (485)
T ss_dssp EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHH-T--------T
T ss_pred EEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhh-c--------c
Confidence 000 0 01113344443 6899999998766555444431 1 2
Q ss_pred CCCcEEEEEcCCcccccchh--h-----hhh-----h--HHhHHHHHHHHhccccEEEecCCChhhhh----cCC-----
Q 001292 315 HSIPLVWIIQEDSLANRLPV--Y-----VER-----G--FQNLLSYWKSVFSRVNVIVFPDYTLPMLY----SVL----- 371 (1106)
Q Consensus 315 ~gIPVI~tIHna~Ls~r~~~--Y-----~~~-----g--leklis~~~~~l~~AD~VIa~S~~~~~~~----~gi----- 371 (1106)
.++|+|+++|+......... . ... . ........+..++.+|.++++|....... .+.
T Consensus 152 ~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~ 231 (485)
T 2qzs_A 152 RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGL 231 (485)
T ss_dssp CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHH
T ss_pred CCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHHHhccccCcchHHH
Confidence 68999999999532111000 0 000 0 00000112345678999999997665542 222
Q ss_pred ---CC--CCEEEeCCCCCCcccccccCcch------------------hHHHHHHHcCCCC--CcEEEEEEcccCccccc
Q 001292 372 ---DA--GNFFVIPGSPADVWAVEAYSKSH------------------EKYQLRKENGFLK--DEIVVVVVGSSFFYNEL 426 (1106)
Q Consensus 372 ---~~--~KI~VIpN~GVDl~~~e~F~ps~------------------s~~~LR~~lGL~~--d~~VIL~VGRl~~y~kg 426 (1106)
+. .++.+||| |+|. +.|.+.. .+..+|+++++++ +.++|+++||+.+
T Consensus 232 ~~~~~~~~~~~vi~n-gvd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~---- 303 (485)
T 2qzs_A 232 LQQRHREGRLSGVLN-GVDE---KIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTS---- 303 (485)
T ss_dssp HHHHHHTTCEEECCC-CCCT---TTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESG----
T ss_pred HHhhccCCceEEEec-CCCc---cccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCcc----
Confidence 12 68999998 8997 5565532 2567889999986 7789999999887
Q ss_pred cCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEE-EcCChhh-HHHHHHHcCeE
Q 001292 427 SWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVR-HYGFNGD-VNGVLLMADIV 504 (1106)
Q Consensus 427 ~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~-flG~~eD-L~~LyaaADVf 504 (1106)
.||++.+++|++.+.+ ++++ |+|+|.|+..+.+.+++++++++ + +|. +.|...+ +..+|+.||++
T Consensus 304 ~Kg~~~li~a~~~l~~---------~~~~-l~ivG~g~~~~~~~l~~~~~~~~--~-~v~~~~g~~~~~~~~~~~~adv~ 370 (485)
T 2qzs_A 304 QKGLDLVLEALPGLLE---------QGGQ-LALLGAGDPVLQEGFLAAAAEYP--G-QVGVQIGYHEAFSHRIMGGADVI 370 (485)
T ss_dssp GGCHHHHHHHHHHHHH---------TTCE-EEEEEEECHHHHHHHHHHHHHST--T-TEEEEESCCHHHHHHHHHHCSEE
T ss_pred ccCHHHHHHHHHHHhh---------CCcE-EEEEeCCchHHHHHHHHHHHhCC--C-cEEEeCCCCHHHHHHHHHhCCEE
Confidence 8999999999988753 3677 68899987545689999999876 4 785 8897644 58999999999
Q ss_pred EEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccC---------CeEEEEcCCCHHHHHHHHHHHH---hCcccH
Q 001292 505 LYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEG---------AQVIFFQKDNPEGLSRAFSLFI---SNGKLS 572 (1106)
Q Consensus 505 V~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg---------~nG~LV~~~D~eeLAeAI~~LL---sDpelR 572 (1106)
|+||..| +||++++||||||+|||+++.+|++|++.++ .+|++++++|+++|+++|.+++ +|+++
T Consensus 371 v~pS~~E--~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~- 447 (485)
T 2qzs_A 371 LVPSRFE--PCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSL- 447 (485)
T ss_dssp EECCSCC--SSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHH-
T ss_pred EECCccC--CCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHH-
Confidence 9999986 9999999999999999999999999999998 8999999999999999999999 68877
Q ss_pred HHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCC
Q 001292 573 KFARTVASAGRLHAKNMLALDCVTRYARILENVLNFP 609 (1106)
Q Consensus 573 k~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk~P 609 (1106)
+.+|++++++ +++.|+.++++|.++|++++..+
T Consensus 448 --~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 448 --WRFVQRQAMA--MDFSWQVAAKSYRELYYRLKLEH 480 (485)
T ss_dssp --HHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC---
T ss_pred --HHHHHHHHHh--hcCCHHHHHHHHHHHHHHhhhhh
Confidence 5888888874 55666777789999999986643
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=303.33 Aligned_cols=343 Identities=14% Similarity=0.106 Sum_probs=255.0
Q ss_pred CEEEEEeCCC-CCChhHHHHHHHHHHHHHCCCEEEEEEcCCCC-c--------------h---HHHHHHhHHHHHhhccC
Q 001292 223 PRIGLILGNM-AKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN-S--------------H---SLWEQIAGQISILGQEQ 283 (1106)
Q Consensus 223 ~RIalVlg~L-~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~-~--------------~---~i~r~lg~lvkiIr~~~ 283 (1106)
+||+++.+.+ ..||.+..+..+++.|+++||+|+|++..... . . ........+.++++..+
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 80 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHP 80 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCCTTCEEEECCCCCSSHHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCCCCCCcEEEEEccCcccchhhHHHHHHHHHHHHhccC
Confidence 5799998874 45899999999999999999999999875211 0 0 11112222455666778
Q ss_pred ccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHH-HHHh--ccccEEEec
Q 001292 284 YSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYW-KSVF--SRVNVIVFP 360 (1106)
Q Consensus 284 pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~-~~~l--~~AD~VIa~ 360 (1106)
+|+||.+.....+. +........+|.+++.|+... ..... .+....+ ...+ +.+|.+++.
T Consensus 81 ~Dvv~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~d~ii~~ 143 (374)
T 2iw1_A 81 ADRVVGFNKMPGLD----------VYFAADVCYAEKVAQEKGFLY-RLTSR------YRHYAAFERATFEQGKSTKLMML 143 (374)
T ss_dssp CSEEEESSCCTTCS----------EEECCSCCHHHHHHHHCCHHH-HTSHH------HHHHHHHHHHHHSTTCCCEEEES
T ss_pred CCEEEEecCCCCce----------eeeccccccceeeeecccchh-hhcHH------HHHHHHHHHHHhhccCCcEEEEc
Confidence 88888765432110 000000112222322233100 00000 0111111 1223 368999999
Q ss_pred CCChhhh---hcCCCCCCEEEeCCCCCCcccccccCcc---hhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHH
Q 001292 361 DYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKS---HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAM 434 (1106)
Q Consensus 361 S~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~ps---~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLL 434 (1106)
|...... ..+++..++.+||| |+|. +.|.+. ..+..++++++++++.++++++|++.+ .||.+.++
T Consensus 144 s~~~~~~~~~~~~~~~~~~~vi~n-gv~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~----~K~~~~li 215 (374)
T 2iw1_A 144 TDKQIADFQKHYQTEPERFQILPP-GIYP---DRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFG----RKGVDRSI 215 (374)
T ss_dssp CHHHHHHHHHHHCCCGGGEEECCC-CCCG---GGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTT----TTTHHHHH
T ss_pred CHHHHHHHHHHhCCChhheEEecC-CcCH---HhcCcccchhHHHHHHHHhCCCCCCeEEEEeccchh----hcCHHHHH
Confidence 9765554 34677789999998 7997 555443 235678999999989999999999887 89999999
Q ss_pred HHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCC
Q 001292 435 HDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQG 514 (1106)
Q Consensus 435 eA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEG 514 (1106)
+|+..+.++. +++++ |+++|.++. +.++++++++++.+ +|+|+|+.+++..+|+.||++|+||..| +
T Consensus 216 ~a~~~l~~~~------~~~~~-l~i~G~g~~---~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~ps~~e--~ 282 (374)
T 2iw1_A 216 EALASLPESL------RHNTL-LFVVGQDKP---RKFEALAEKLGVRS-NVHFFSGRNDVSELMAAADLLLHPAYQE--A 282 (374)
T ss_dssp HHHHTSCHHH------HHTEE-EEEESSSCC---HHHHHHHHHHTCGG-GEEEESCCSCHHHHHHHCSEEEECCSCC--S
T ss_pred HHHHHhHhcc------CCceE-EEEEcCCCH---HHHHHHHHHcCCCC-cEEECCCcccHHHHHHhcCEEEeccccC--C
Confidence 9998775431 15777 688999873 78999999999987 9999999999999999999999999986 9
Q ss_pred CcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEc-CCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHH
Q 001292 515 FPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQ-KDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALD 593 (1106)
Q Consensus 515 FGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~-~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee 593 (1106)
||++++||||||+|||+++.+++.+++.++.+|++++ ++|+++|+++|.++++|++. ++++++++++.++++.|..
T Consensus 283 ~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~~~~ 359 (374)
T 2iw1_A 283 AGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPL---RMAWAENARHYADTQDLYS 359 (374)
T ss_dssp SCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHSCCSC
T ss_pred cccHHHHHHHCCCCEEEecCCCchhhhccCCceEEeCCCCCHHHHHHHHHHHHcChHH---HHHHHHHHHHHHHHhhHHH
Confidence 9999999999999999999999999999999999998 88999999999999999987 6899999999999887777
Q ss_pred HHHHHHHHHHHHh
Q 001292 594 CVTRYARILENVL 606 (1106)
Q Consensus 594 ~v~~Y~eLyeslL 606 (1106)
..+.+.++++..+
T Consensus 360 ~~~~~~~~l~~~l 372 (374)
T 2iw1_A 360 LPEKAADIITGGL 372 (374)
T ss_dssp HHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHhh
Confidence 7778888887654
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-31 Score=297.58 Aligned_cols=337 Identities=13% Similarity=0.086 Sum_probs=257.5
Q ss_pred CEEEEEeCCCCC-ChhHHHHHHHHHHHHHCCCEEEEEEcCCCC----------chHHHHHH----------hHHHHHhhc
Q 001292 223 PRIGLILGNMAK-DSRSLLLITVVKNLQKLGYVFKIYAVRSGN----------SHSLWEQI----------AGQISILGQ 281 (1106)
Q Consensus 223 ~RIalVlg~L~~-gGesl~vv~LakaLqe~GyeVtV~t~~dg~----------~~~i~r~l----------g~lvkiIr~ 281 (1106)
+||++|.+.... ||.+..+..|+++|.+. |+|+|++....+ .......+ ..+.+.++.
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 79 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSVHANIEEFDAQTAEHVRGLNEQGFYYSGLSEFIDV 79 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCSCSSSEEEEHHHHHHHTTCCSTTCCHHHHHHHHHH
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcccccccccCCccccccccccccccchHHHHHHHHHh
Confidence 689999877654 88899999999999999 999999875422 00110000 013556677
Q ss_pred cCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhcccc--EEEe
Q 001292 282 EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVN--VIVF 359 (1106)
Q Consensus 282 ~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD--~VIa 359 (1106)
.+||+||++.+...+...+.....+ ....+++...|......... ....++.+| .+++
T Consensus 80 ~~~Div~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~ii~ 139 (413)
T 3oy2_A 80 HKPDIVMIYNDPIVIGNYLLAMGKC-------SHRTKIVLYVDLVSKNIREN-------------LWWIFSHPKVVGVMA 139 (413)
T ss_dssp HCCSEEEEEECHHHHHHHHHHGGGC-------CSCCEEEEEECCCSBSCCGG-------------GGGGGGCTTEEEEEE
T ss_pred cCCCEEEEcchHHHHHHHHHHhccC-------CCCCceeeeccccchhhHHH-------------HHHHHhccCCceEEE
Confidence 8999999996555443333332111 11245666767643221111 123467877 9999
Q ss_pred cCCChhhhh--cCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCC--CcEEEEEEcccCccccccCCHHHHHH
Q 001292 360 PDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLK--DEIVVVVVGSSFFYNELSWDYAVAMH 435 (1106)
Q Consensus 360 ~S~~~~~~~--~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~--d~~VIL~VGRl~~y~kg~Kg~dlLLe 435 (1106)
.|....... .+. ..++.+||| |+|. +.| ...++.+++++ +.++|+++||+.+ .||++.+++
T Consensus 140 ~S~~~~~~~~~~~~-~~~~~vi~n-gvd~---~~~------~~~~~~~~~~~~~~~~~il~vGr~~~----~Kg~~~li~ 204 (413)
T 3oy2_A 140 MSKCWISDICNYGC-KVPINIVSH-FVDT---KTI------YDARKLVGLSEYNDDVLFLNMNRNTA----RKRLDIYVL 204 (413)
T ss_dssp SSTHHHHHHHHTTC-CSCEEECCC-CCCC---CCC------TTHHHHTTCGGGTTSEEEECCSCSSG----GGTHHHHHH
T ss_pred cCHHHHHHHHHcCC-CCceEEeCC-CCCH---HHH------HHHHHhcCCCcccCceEEEEcCCCch----hcCcHHHHH
Confidence 998766652 233 578999998 7997 444 23567788887 8999999999887 899999999
Q ss_pred HHHHhHHHHHhhccCCCCeEEEEEEcCCCCc----cHHHHHHHHHHcCCCCCc-------EEEcCCh--hhHHHHHHHcC
Q 001292 436 DVGPLLIKYARRNSVEGSFKFVFLCGNSTDG----YNDALQEVASRLGLLEHS-------VRHYGFN--GDVNGVLLMAD 502 (1106)
Q Consensus 436 A~k~Ll~k~aklk~~~PdikfLIIVG~Gper----Y~eeLkeLaeklGL~d~r-------V~flG~~--eDL~~LyaaAD 502 (1106)
|+..+.++ .|+++ |+|+|.++.. +.+.++++++++|+.+ + |.+.|.. +++..+|+.||
T Consensus 205 a~~~l~~~-------~~~~~-l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~-~v~~l~~vv~~~g~~~~~~~~~~~~~ad 275 (413)
T 3oy2_A 205 AAARFISK-------YPDAK-VRFLCNSHHESKFDLHSIALRELVASGVDN-VFTHLNKIMINRTVLTDERVDMMYNACD 275 (413)
T ss_dssp HHHHHHHH-------CTTCC-EEEEEECCTTCSCCHHHHHHHHHHHHTCSC-HHHHHTTEEEECSCCCHHHHHHHHHHCS
T ss_pred HHHHHHHh-------CCCcE-EEEEeCCcccchhhHHHHHHHHHHHcCccc-ccccccceeeccCcCCHHHHHHHHHhCC
Confidence 99887653 37887 6888888753 1388899999999997 6 8888964 68999999999
Q ss_pred eEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCe---------------EE--EEcCCCHHHHHHHHHHH
Q 001292 503 IVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQ---------------VI--FFQKDNPEGLSRAFSLF 565 (1106)
Q Consensus 503 VfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~n---------------G~--LV~~~D~eeLAeAI~~L 565 (1106)
++|+||..| +||++++||||||+|||+++.+|++|++.++.+ |+ ++++.|+++|+++| ++
T Consensus 276 v~v~pS~~E--~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l 352 (413)
T 3oy2_A 276 VIVNCSSGE--GFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TF 352 (413)
T ss_dssp EEEECCSCC--SSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HH
T ss_pred EEEeCCCcC--CCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HH
Confidence 999999986 999999999999999999999999999998887 99 99999999999999 99
Q ss_pred HhCcccHHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHhcCCC
Q 001292 566 ISNGKLSKFARTVASAGRLHAKNM-LALDCVTRYARILENVLNFPS 610 (1106)
Q Consensus 566 LsDpelRk~r~~mGe~Are~ake~-fsee~v~~Y~eLyeslLk~Ps 610 (1106)
++|++. +.+|++++++.+.+. .|+..+++|.++|+++++...
T Consensus 353 ~~~~~~---~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~~ 395 (413)
T 3oy2_A 353 FKDEKN---RKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVES 395 (413)
T ss_dssp TTSHHH---HHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC---
T ss_pred hcCHHH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Confidence 999987 689999999999655 556677799999999987644
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.5e-31 Score=297.36 Aligned_cols=339 Identities=14% Similarity=0.156 Sum_probs=256.3
Q ss_pred CCCCEEEEEeCCCCC--ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCc------------hHH-----H-------HHHh
Q 001292 220 VRPPRIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNS------------HSL-----W-------EQIA 273 (1106)
Q Consensus 220 ~r~~RIalVlg~L~~--gGesl~vv~LakaLqe~GyeVtV~t~~dg~~------------~~i-----~-------r~lg 273 (1106)
.+.+||+++.+.... +|.+..+..++++|.+.||+|++++...... ... . ....
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPATHR 97 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCHHHHH
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccccHHHHH
Confidence 456799999987643 8889999999999999999999998854321 000 0 0112
Q ss_pred HHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhcc
Q 001292 274 GQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSR 353 (1106)
Q Consensus 274 ~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~ 353 (1106)
.+.++++..++|+||++......+..+..+. .++|+|+++|+....... . ..+...+...++.
T Consensus 98 ~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~----------~~~~~i~~~h~~~~~~~~----~---~~~~~~~~~~~~~ 160 (406)
T 2gek_A 98 KVKKWIAEGDFDVLHIHEPNAPSLSMLALQA----------AEGPIVATFHTSTTKSLT----L---SVFQGILRPYHEK 160 (406)
T ss_dssp HHHHHHHHHCCSEEEEECCCSSSHHHHHHHH----------EESSEEEEECCCCCSHHH----H---HHHHSTTHHHHTT
T ss_pred HHHHHHHhcCCCEEEECCccchHHHHHHHHh----------cCCCEEEEEcCcchhhhh----H---HHHHHHHHHHHhh
Confidence 3566677789999999776554443333321 468999999995322110 1 1111111245789
Q ss_pred ccEEEecCCChhhh-hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccc-CccccccCCHH
Q 001292 354 VNVIVFPDYTLPML-YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSS-FFYNELSWDYA 431 (1106)
Q Consensus 354 AD~VIa~S~~~~~~-~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl-~~y~kg~Kg~d 431 (1106)
+|.+++.+...... ...++..++ +||| |+|. +.|.+... ..+++++.++|+++|++ .. .||.+
T Consensus 161 ~d~ii~~s~~~~~~~~~~~~~~~~-vi~~-~v~~---~~~~~~~~------~~~~~~~~~~i~~~G~~~~~----~Kg~~ 225 (406)
T 2gek_A 161 IIGRIAVSDLARRWQMEALGSDAV-EIPN-GVDV---ASFADAPL------LDGYPREGRTVLFLGRYDEP----RKGMA 225 (406)
T ss_dssp CSEEEESSHHHHHHHHHHHSSCEE-ECCC-CBCH---HHHHTCCC------CTTCSCSSCEEEEESCTTSG----GGCHH
T ss_pred CCEEEECCHHHHHHHHHhcCCCcE-EecC-CCCh---hhcCCCch------hhhccCCCeEEEEEeeeCcc----ccCHH
Confidence 99999999766554 234556678 9997 7887 44433211 12334456899999998 77 89999
Q ss_pred HHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccC
Q 001292 432 VAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSS 509 (1106)
Q Consensus 432 lLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~ 509 (1106)
.+++|+..+.+ .+|+++ |+|+|.++. +.++++++++ .+ +|.|.|+. .++..+|+.||++|+||.
T Consensus 226 ~li~a~~~l~~-------~~~~~~-l~i~G~~~~---~~l~~~~~~~--~~-~v~~~g~~~~~~~~~~~~~adv~v~ps~ 291 (406)
T 2gek_A 226 VLLAALPKLVA-------RFPDVE-ILIVGRGDE---DELREQAGDL--AG-HLRFLGQVDDATKASAMRSADVYCAPHL 291 (406)
T ss_dssp HHHHHHHHHHT-------TSTTCE-EEEESCSCH---HHHHHHTGGG--GG-GEEECCSCCHHHHHHHHHHSSEEEECCC
T ss_pred HHHHHHHHHHH-------HCCCeE-EEEEcCCcH---HHHHHHHHhc--cC-cEEEEecCCHHHHHHHHHHCCEEEecCC
Confidence 99999987753 237888 688999884 7788888766 44 89999966 567999999999999986
Q ss_pred -CCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH
Q 001292 510 -QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKN 588 (1106)
Q Consensus 510 -~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake 588 (1106)
.| +||++++||||||+|||+++.+++.|++.++.+|++++++|+++|+++|.++++|++. +.++++++++.++.
T Consensus 292 ~~e--~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~---~~~~~~~~~~~~~~ 366 (406)
T 2gek_A 292 GGE--SFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQL---RAGYVARASERVHR 366 (406)
T ss_dssp SCC--SSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCHHH---HHHHHHHHHHHGGG
T ss_pred CCC--CCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHHh
Confidence 65 9999999999999999999999999999999999999999999999999999999987 68899999999996
Q ss_pred hcHHHHHHHHHHHHHHHhcCC
Q 001292 589 MLALDCVTRYARILENVLNFP 609 (1106)
Q Consensus 589 ~fsee~v~~Y~eLyeslLk~P 609 (1106)
+.++..+.+|.++|++++...
T Consensus 367 ~s~~~~~~~~~~~~~~~~~~~ 387 (406)
T 2gek_A 367 YDWSVVSAQIMRVYETVSGAG 387 (406)
T ss_dssp GBHHHHHHHHHHHHHHHCCTT
T ss_pred CCHHHHHHHHHHHHHHHHhhc
Confidence 667778889999999988764
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.9e-30 Score=303.29 Aligned_cols=357 Identities=11% Similarity=0.084 Sum_probs=247.3
Q ss_pred CCCCCEEEEEeCCCCC----ChhHHHHHHHHHHHHHCCCEEEEEEcCCCCc-----------------------------
Q 001292 219 GVRPPRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNS----------------------------- 265 (1106)
Q Consensus 219 g~r~~RIalVlg~L~~----gGesl~vv~LakaLqe~GyeVtV~t~~dg~~----------------------------- 265 (1106)
.-+.+||++|..++.+ ||-.-.+..|.++|+++|++|.|+++..+..
T Consensus 6 ~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (536)
T 3vue_A 6 HHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKR 85 (536)
T ss_dssp --CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEET
T ss_pred CCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEEC
Confidence 3467999999888654 8888889999999999999999987421100
Q ss_pred ---------------------hHHH------------HHHh----HHHHHhh-------------ccCccEEEEccccHH
Q 001292 266 ---------------------HSLW------------EQIA----GQISILG-------------QEQYSLIDWSIFDGI 295 (1106)
Q Consensus 266 ---------------------~~i~------------r~lg----~lvkiIr-------------~~~pDiIh~~~~~~i 295 (1106)
..++ ..+. .....++ ...++++|+|.+.+.
T Consensus 86 gv~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t~ 165 (536)
T 3vue_A 86 GVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTG 165 (536)
T ss_dssp TEEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGGS
T ss_pred CceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchHH
Confidence 0000 0000 0111111 123468889999887
Q ss_pred HHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchh--hhhhh-------------------HHhHHHHHHHHhccc
Q 001292 296 IADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPV--YVERG-------------------FQNLLSYWKSVFSRV 354 (1106)
Q Consensus 296 ~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~--Y~~~g-------------------leklis~~~~~l~~A 354 (1106)
++..+.+.... ......++|+|+|+|+......... ....+ ....+...+..+..|
T Consensus 166 l~~~~l~~~~~---~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~a 242 (536)
T 3vue_A 166 PLASYLKNNYQ---PNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEA 242 (536)
T ss_dssp THHHHHHHHTT---TTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHC
T ss_pred HHHHHHHHhhh---hhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHHHHHhc
Confidence 77666553221 1111458999999998432211100 00000 000111234557789
Q ss_pred cEEEecCCChhhh-hc----------CCCCCCEEEeCCCCCCcccccccCcc-------------------hhHHHHHHH
Q 001292 355 NVIVFPDYTLPML-YS----------VLDAGNFFVIPGSPADVWAVEAYSKS-------------------HEKYQLRKE 404 (1106)
Q Consensus 355 D~VIa~S~~~~~~-~~----------gi~~~KI~VIpN~GVDl~~~e~F~ps-------------------~s~~~LR~~ 404 (1106)
|.|+++|...... .. .....++.+|+| |||. +.|.|. ..+..+++.
T Consensus 243 d~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~N-GiD~---~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~ 318 (536)
T 3vue_A 243 DRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVN-GMDV---SEWDPSKDKYITAKYDATTAIEAKALNKEALQAE 318 (536)
T ss_dssp SEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCC-CCCT---TTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHH
T ss_pred cEEEEcCHHHhhhhhcccccccccccccccCCeEEEEC-Ccch---hhcCCCCccccccccchhhhhhhhHHHHHHHHHh
Confidence 9999999665443 11 134568999998 8998 555542 124566777
Q ss_pred cCCC--CCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCC
Q 001292 405 NGFL--KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLE 482 (1106)
Q Consensus 405 lGL~--~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d 482 (1106)
+|++ ++.++|+++||+.+ +||++.+++|+.+|.+ .+.+ ++|+|.|+..+...++.++..+ .+
T Consensus 319 ~gl~~d~~~p~i~~vgRl~~----~Kg~~~li~a~~~l~~---------~~~~-l~l~G~G~~~~~~~~~~~~~~~--~~ 382 (536)
T 3vue_A 319 AGLPVDRKIPLIAFIGRLEE----QKGPDVMAAAIPELMQ---------EDVQ-IVLLGTGKKKFEKLLKSMEEKY--PG 382 (536)
T ss_dssp TTSCCCTTSCEEEEECCBSG----GGCHHHHHHHHHHHTT---------SSCE-EEEECCBCHHHHHHHHHHHHHS--TT
T ss_pred cCCCCCCCCcEEEEEeeccc----cCChHHHHHHHHHhHh---------hCCe-EEEEeccCchHHHHHHHHHhhc--CC
Confidence 8875 56799999999998 9999999999987752 3455 5788888866556667766654 34
Q ss_pred CcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEE----------EE
Q 001292 483 HSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVI----------FF 550 (1106)
Q Consensus 483 ~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~----------LV 550 (1106)
+|.+.+ ..+++..+|+.||++|+||.+| +||++++||||||+|||++++||++|+|.|+++|+ ++
T Consensus 383 -~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E--~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~ 459 (536)
T 3vue_A 383 -KVRAVVKFNAPLAHLIMAGADVLAVPSRFE--PCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVV 459 (536)
T ss_dssp -TEEEECSCCHHHHHHHHHHCSEEEECCSCC--SSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCC
T ss_pred -ceEEEEeccHHHHHHHHHhhheeecccccC--CCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEE
Confidence 677776 4567889999999999999997 99999999999999999999999999999999998 66
Q ss_pred cCCCHHHHHHHHHHHHh--CcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHh
Q 001292 551 QKDNPEGLSRAFSLFIS--NGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVL 606 (1106)
Q Consensus 551 ~~~D~eeLAeAI~~LLs--DpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslL 606 (1106)
++.|+++|+++|.++++ +.+. .++|++++.+ ++++|++++++|+++|+++.
T Consensus 460 ~~~d~~~la~ai~ral~~~~~~~---~~~~~~~am~--~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 460 EPSDVKKVAATLKRAIKVVGTPA---YEEMVRNCMN--QDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSHH---HHHHHHHHHH--SCCSSHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHhcCcHH---HHHHHHHHHH--hcCCHHHHHHHHHHHHHHhh
Confidence 77789999999998776 3322 4566666632 45667788889999999863
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-29 Score=310.56 Aligned_cols=353 Identities=11% Similarity=0.070 Sum_probs=254.9
Q ss_pred CCCEEEEEeCCC-----------CCChhHHHHHH--------HHHHHHHCCCEEE----EEEcCCC--------------
Q 001292 221 RPPRIGLILGNM-----------AKDSRSLLLIT--------VVKNLQKLGYVFK----IYAVRSG-------------- 263 (1106)
Q Consensus 221 r~~RIalVlg~L-----------~~gGesl~vv~--------LakaLqe~GyeVt----V~t~~dg-------------- 263 (1106)
+..+|++|+.+- +.||+.+++.+ |+++|.++|++|+ |+|....
T Consensus 277 ~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i 356 (816)
T 3s28_A 277 MVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERV 356 (816)
T ss_dssp CCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEEC
T ss_pred ceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcceee
Confidence 467899886554 34899999995 6666677899885 7754210
Q ss_pred -----------Cch-------------HHHH----HH-hHHHHHhhc--cCccEEEEccccHHHHHHHHHHHhhhhcccC
Q 001292 264 -----------NSH-------------SLWE----QI-AGQISILGQ--EQYSLIDWSIFDGIIADSLEAKEAISSLMQE 312 (1106)
Q Consensus 264 -----------~~~-------------~i~r----~l-g~lvkiIr~--~~pDiIh~~~~~~i~v~~La~k~~idII~te 312 (1106)
+.. .+|. .. ..+..+++. .+||+||.|.+...++..+.++.
T Consensus 357 ~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~-------- 428 (816)
T 3s28_A 357 YDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHK-------- 428 (816)
T ss_dssp TTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHH--------
T ss_pred cCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHH--------
Confidence 000 0111 11 112233332 37999999988887777666653
Q ss_pred CCCCCcEEEEEcCCcccccch--hhh--hhhHHhHHHH---HHHHhccccEEEecCCChhhh-------hc---------
Q 001292 313 PFHSIPLVWIIQEDSLANRLP--VYV--ERGFQNLLSY---WKSVFSRVNVIVFPDYTLPML-------YS--------- 369 (1106)
Q Consensus 313 ~~~gIPVI~tIHna~Ls~r~~--~Y~--~~gleklis~---~~~~l~~AD~VIa~S~~~~~~-------~~--------- 369 (1106)
.++|+|+++|+........ .+. ....-++... -...++.+|.||+.+...... +.
T Consensus 429 --~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~ 506 (816)
T 3s28_A 429 --LGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPG 506 (816)
T ss_dssp --HTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETT
T ss_pred --cCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccch
Confidence 4799999999843221110 000 0000000011 123678999999998654431 11
Q ss_pred --------CCCCCCEEEeCCCCCCcccccccCcchhHH------------------HHHHHcCC--CCCcEEEEEEcccC
Q 001292 370 --------VLDAGNFFVIPGSPADVWAVEAYSKSHEKY------------------QLRKENGF--LKDEIVVVVVGSSF 421 (1106)
Q Consensus 370 --------gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~------------------~LR~~lGL--~~d~~VIL~VGRl~ 421 (1106)
+....++.|||| |+|. +.|.+..... ..++.+|+ .++.++|+++||+.
T Consensus 507 Lyr~~~gI~~~~~ki~VIpn-GVD~---~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~ 582 (816)
T 3s28_A 507 LYRVVHGIDVFDPKFNIVSP-GADM---SIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLD 582 (816)
T ss_dssp TEEEEESCCTTCTTEEECCC-CCCT---TTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCC
T ss_pred hhhcccccccCCCCEEEECC-CcCH---HHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCCeEEEEEccCc
Confidence 112238999998 8998 6666542111 12345566 67889999999998
Q ss_pred ccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCC---------ccHHHHHHHHHHcCCCCCcEEEcCCh-
Q 001292 422 FYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD---------GYNDALQEVASRLGLLEHSVRHYGFN- 491 (1106)
Q Consensus 422 ~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gpe---------rY~eeLkeLaeklGL~d~rV~flG~~- 491 (1106)
+ .||++.+++|+..+.+.. ++++ |+|+|.++. .+.+.++++++++++.+ +|.|+|++
T Consensus 583 ~----~KGid~LIeA~~~L~~~~-------~~v~-LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~-~V~flG~~~ 649 (816)
T 3s28_A 583 R----VKNLSGLVEWYGKNTRLR-------ELAN-LVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNG-QFRWISSQM 649 (816)
T ss_dssp T----TTTHHHHHHHHHHCHHHH-------HHCE-EEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBB-BEEEECCCC
T ss_pred c----cCCHHHHHHHHHHHHhhC-------CCeE-EEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCC-cEEEccCcc
Confidence 8 899999999999887543 5677 688999882 13588999999999987 99999943
Q ss_pred -----hhHHHHHH-HcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHH
Q 001292 492 -----GDVNGVLL-MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLF 565 (1106)
Q Consensus 492 -----eDL~~Lya-aADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~L 565 (1106)
+++..+|+ ++|++|+||..| +||++++||||||+|||+++.||+.|++.++.+|+++++.|+++|+++|.++
T Consensus 650 ~~v~~~eL~~~~~~aaDvfV~PS~~E--gfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~l 727 (816)
T 3s28_A 650 DRVRNGELYRYICDTKGAFVQPALYE--AFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADF 727 (816)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECCSCB--SSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHhcCeEEEECCCcc--CccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHH
Confidence 56888888 689999999987 9999999999999999999999999999999999999999999999999777
Q ss_pred H----hCcccHHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHH
Q 001292 566 I----SNGKLSKFARTVASAGRLHAKNM-LALDCVTRYARILENV 605 (1106)
Q Consensus 566 L----sDpelRk~r~~mGe~Are~ake~-fsee~v~~Y~eLyesl 605 (1106)
+ +|++. +.+|+++|++.+.+. .|+..+++|.++|+..
T Consensus 728 L~~Ll~d~~~---~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 728 FTKCKEDPSH---WDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp HHHHHHCTHH---HHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred HHHhccCHHH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 6 89987 689999999999554 5566677999999864
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-29 Score=278.14 Aligned_cols=301 Identities=14% Similarity=0.057 Sum_probs=235.3
Q ss_pred CCEEEEEeCC--------C------CCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHH----H--HHHhHHHHHhhc
Q 001292 222 PPRIGLILGN--------M------AKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSL----W--EQIAGQISILGQ 281 (1106)
Q Consensus 222 ~~RIalVlg~--------L------~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i----~--r~lg~lvkiIr~ 281 (1106)
++||+++.+. + ..||.+..+..++++|.++||+|++++...+..... . .....+.++++.
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 82 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGRPGLTVVPAGEPEEIERWLRT 82 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCSTTEEECSCCSHHHHHHHHHH
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCCCcceeccCCcHHHHHHHHHh
Confidence 5799999988 2 348999999999999999999999998754321100 0 000124567777
Q ss_pred cCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecC
Q 001292 282 EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPD 361 (1106)
Q Consensus 282 ~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S 361 (1106)
.++|+||.+.....+.. . ...++| |+++|+..... ..+|.+++.|
T Consensus 83 ~~~Dvi~~~~~~~~~~~---~----------~~~~~p-v~~~h~~~~~~---------------------~~~d~ii~~S 127 (342)
T 2iuy_A 83 ADVDVVHDHSGGVIGPA---G----------LPPGTA-FISSHHFTTRP---------------------VNPVGCTYSS 127 (342)
T ss_dssp CCCSEEEECSSSSSCST---T----------CCTTCE-EEEEECSSSBC---------------------SCCTTEEESC
T ss_pred cCCCEEEECCchhhHHH---H----------hhcCCC-EEEecCCCCCc---------------------ccceEEEEcC
Confidence 89999999876643221 1 136889 99999963211 0188899998
Q ss_pred CChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhH
Q 001292 362 YTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLL 441 (1106)
Q Consensus 362 ~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll 441 (1106)
......... ..++.+||| |+|. +.|.+... .. ++.++|+++||+.+ .||++.+++|++.+
T Consensus 128 ~~~~~~~~~--~~~~~vi~n-gvd~---~~~~~~~~--------~~-~~~~~i~~vG~~~~----~Kg~~~li~a~~~~- 187 (342)
T 2iuy_A 128 RAQRAHCGG--GDDAPVIPI-PVDP---ARYRSAAD--------QV-AKEDFLLFMGRVSP----HKGALEAAAFAHAC- 187 (342)
T ss_dssp HHHHHHTTC--CTTSCBCCC-CBCG---GGSCCSTT--------CC-CCCSCEEEESCCCG----GGTHHHHHHHHHHH-
T ss_pred HHHHHHHhc--CCceEEEcC-CCCh---hhcCcccc--------cC-CCCCEEEEEecccc----ccCHHHHHHHHHhc-
Confidence 776665443 568899998 7997 55554321 12 34568999999887 89999999999654
Q ss_pred HHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccC----------
Q 001292 442 IKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSS---------- 509 (1106)
Q Consensus 442 ~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~---------- 509 (1106)
+++ |+|+|.++.. +.+++++++++ + +|+|+|+. .++..+|+.||++|+||.
T Consensus 188 -----------~~~-l~i~G~g~~~--~~l~~~~~~~~--~-~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~ 250 (342)
T 2iuy_A 188 -----------GRR-LVLAGPAWEP--EYFDEITRRYG--S-TVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIW 250 (342)
T ss_dssp -----------TCC-EEEESCCCCH--HHHHHHHHHHT--T-TEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCC
T ss_pred -----------CcE-EEEEeCcccH--HHHHHHHHHhC--C-CEEEeccCCHHHHHHHHHhCCEEEECCccccccccccc
Confidence 345 6889999865 89999999887 4 89999966 467999999999999999
Q ss_pred CCCCCCcHHHHHHHHhCCCEEecCCCCchhhhcc--CCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH-
Q 001292 510 QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE--GAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHA- 586 (1106)
Q Consensus 510 ~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~D--g~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~a- 586 (1106)
.| +||++++||||||+|||+++.+++.|++.+ +.+|+++++ |+++|+++|.++++ ++++++.+
T Consensus 251 ~E--~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~~-----------~~~~~~~~~ 316 (342)
T 2iuy_A 251 CE--PGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAGLPA-----------SDEVRRAAV 316 (342)
T ss_dssp CC--CCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHTSCC-----------HHHHHHHHH
T ss_pred cc--CccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHHHHH-----------HHHHHHHHH
Confidence 66 999999999999999999999999999999 889999999 99999999999987 34677777
Q ss_pred HHhcHHHHHHHHHHHHHHHhcC
Q 001292 587 KNMLALDCVTRYARILENVLNF 608 (1106)
Q Consensus 587 ke~fsee~v~~Y~eLyeslLk~ 608 (1106)
+++.++..+++|.++|+++++.
T Consensus 317 ~~~s~~~~~~~~~~~~~~~~~~ 338 (342)
T 2iuy_A 317 RLWGHVTIAERYVEQYRRLLAG 338 (342)
T ss_dssp HHHBHHHHHHHHHHHHHHHHTT
T ss_pred HhcCHHHHHHHHHHHHHHHHcc
Confidence 4556677778999999998874
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=248.27 Aligned_cols=312 Identities=13% Similarity=0.073 Sum_probs=229.9
Q ss_pred CCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchH----------------------------HH---H
Q 001292 222 PPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS----------------------------LW---E 270 (1106)
Q Consensus 222 ~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~----------------------------i~---r 270 (1106)
.+||+++.+. .+|....+..++++|.++||+|++++..++.... .+ .
T Consensus 6 ~mkIl~~~~~--~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (364)
T 1f0k_A 6 GKRLMVMAGG--TGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFN 83 (364)
T ss_dssp -CEEEEECCS--SHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHH
T ss_pred CcEEEEEeCC--CccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCcCccHHHHHHHHHHHH
Confidence 4799999754 4688888899999999999999999875431100 01 1
Q ss_pred HHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHH
Q 001292 271 QIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSV 350 (1106)
Q Consensus 271 ~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~ 350 (1106)
....+.+.++..+||+||.+.....+...+..+. .++|+|++.|+... . .... ..
T Consensus 84 ~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~----------~~~p~v~~~~~~~~--------~-----~~~~--~~ 138 (364)
T 1f0k_A 84 AWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWS----------LGIPVVLHEQNGIA--------G-----LTNK--WL 138 (364)
T ss_dssp HHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHH----------TTCCEEEEECSSSC--------C-----HHHH--HH
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHH----------cCCCEEEEecCCCC--------c-----HHHH--HH
Confidence 1222556777789999999876544444344332 57999999888521 0 0111 23
Q ss_pred hccccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEE-EEcccCccccccCC
Q 001292 351 FSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVV-VVGSSFFYNELSWD 429 (1106)
Q Consensus 351 l~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL-~VGRl~~y~kg~Kg 429 (1106)
.+.+|.+++.+... ++ ++.+|+| |+|. +.|.+.. .+..++++++.++++ ++|++.. .|+
T Consensus 139 ~~~~d~v~~~~~~~------~~--~~~~i~n-~v~~---~~~~~~~----~~~~~~~~~~~~~il~~~g~~~~----~k~ 198 (364)
T 1f0k_A 139 AKIATKVMQAFPGA------FP--NAEVVGN-PVRT---DVLALPL----PQQRLAGREGPVRVLVVGGSQGA----RIL 198 (364)
T ss_dssp TTTCSEEEESSTTS------SS--SCEECCC-CCCH---HHHTSCC----HHHHHTTCCSSEEEEEECTTTCC----HHH
T ss_pred HHhCCEEEecChhh------cC--CceEeCC-ccch---hhcccch----hhhhcccCCCCcEEEEEcCchHh----HHH
Confidence 46789988876543 23 5778887 7886 4443321 245677776766555 4566655 678
Q ss_pred HHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccC
Q 001292 430 YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSS 509 (1106)
Q Consensus 430 ~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~ 509 (1106)
.+.+++|++.+.+ ++++++++|+++ .+.+++++++++++ +|.|.|+.+++..+|+.||++|+||
T Consensus 199 ~~~li~a~~~l~~----------~~~~l~i~G~~~---~~~l~~~~~~~~~~--~v~~~g~~~~~~~~~~~ad~~v~~s- 262 (364)
T 1f0k_A 199 NQTMPQVAAKLGD----------SVTIWHQSGKGS---QQSVEQAYAEAGQP--QHKVTEFIDDMAAAYAWADVVVCRS- 262 (364)
T ss_dssp HHHHHHHHHHHGG----------GEEEEEECCTTC---HHHHHHHHHHTTCT--TSEEESCCSCHHHHHHHCSEEEECC-
T ss_pred HHHHHHHHHHhcC----------CcEEEEEcCCch---HHHHHHHHhhcCCC--ceEEecchhhHHHHHHhCCEEEECC-
Confidence 8999999976631 456677889988 27888999988885 6999999999999999999999997
Q ss_pred CCCCCCcHHHHHHHHhCCCEEecCCCCch--------hhhccCCeEEEEcCCC--HHHHHHHHHHHHhCcccHHHHHHHH
Q 001292 510 QVEQGFPSLIVRAMTFGIPVITPDFPIIK--------EYVAEGAQVIFFQKDN--PEGLSRAFSLFISNGKLSKFARTVA 579 (1106)
Q Consensus 510 ~EeEGFGlvLLEAMA~G~PVIASD~gGI~--------EiV~Dg~nG~LV~~~D--~eeLAeAI~~LLsDpelRk~r~~mG 579 (1106)
| |++++||||+|+|||+++.+|+. +++.++ .|++++++| +++|+++|.++ |+++ +++|+
T Consensus 263 ----g-~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~~~~d~~~~~la~~i~~l--~~~~---~~~~~ 331 (364)
T 1f0k_A 263 ----G-ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKIIEQPQLSVDAVANTLAGW--SRET---LLTMA 331 (364)
T ss_dssp ----C-HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEECCGGGCCHHHHHHHHHTC--CHHH---HHHHH
T ss_pred ----c-hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEeccccCCHHHHHHHHHhc--CHHH---HHHHH
Confidence 3 89999999999999999999864 456555 599999988 99999999999 7776 68899
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 001292 580 SAGRLHAKNMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 580 e~Are~ake~fsee~v~~Y~eLyeslLk 607 (1106)
+++++.++++.++..++.|.++|++..+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 359 (364)
T 1f0k_A 332 ERARAASIPDATERVANEVSRVARALEH 359 (364)
T ss_dssp HHHHHTCCTTHHHHHHHHHHHHHTTC--
T ss_pred HHHHHhhccCHHHHHHHHHHHHHHHHHh
Confidence 9999998876677777899999987544
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=266.47 Aligned_cols=325 Identities=12% Similarity=0.116 Sum_probs=213.8
Q ss_pred CCCCEEEEEeCCCCCC---hhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHHHHHHhH--H----------HHH------
Q 001292 220 VRPPRIGLILGNMAKD---SRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAG--Q----------ISI------ 278 (1106)
Q Consensus 220 ~r~~RIalVlg~L~~g---Gesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i~r~lg~--l----------vki------ 278 (1106)
.+++||+++++.+.++ |....+..++++|.++||+|+|++............+.. . ..+
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 123 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDATPNPKDLQSFKSFKYVMPEEDKDFALQIVPFNDR 123 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSCCCCHHHHGGGTTSEECCTTCCCCCSEEEEECSCC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecCCCChHHHHhhhccceeeccCCccccceeeecccc
Confidence 4678999999999874 555568899999999999999999864321111000000 0 000
Q ss_pred ----hhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccc
Q 001292 279 ----LGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRV 354 (1106)
Q Consensus 279 ----Ir~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~A 354 (1106)
+....+|+||.+.+..........+...... .....|.++.+|+..-. +++. ...... ....+..+
T Consensus 124 ~~~~~~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~----~~~~-~~~~~~--~~~~~~~~ 193 (413)
T 2x0d_A 124 YNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTY---GIPPNKILYIIQDFEPG----FYQW-SSQYVL--AESTYKYR 193 (413)
T ss_dssp TTCCEEECTTEEEEECSHHHHHHHHHHHHHHHHHH---TCCCCCEEEEECSCGGG----GSCS-SHHHHH--HHHTTSCC
T ss_pred ccccccCCCCCEEEEehHHHHHHHHHhhhhhhhhc---ccccCcEEEEEeechhh----cCcc-ChHHHH--HHHHhccC
Confidence 0123588998887665443332211000000 01356788877774211 0010 001111 12345544
Q ss_pred c--EEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCH
Q 001292 355 N--VIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDY 430 (1106)
Q Consensus 355 D--~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~ 430 (1106)
+ .++++|....+. ..+++..++.+++| |+|. +.|.+. ..+ .++...++++||+.. ..|++
T Consensus 194 ~~~~vi~~S~~~~~~l~~~g~~~~~~~~i~~-g~d~---~~~~~~--------~~~-~~~~~~il~~gr~~~---~~Kg~ 257 (413)
T 2x0d_A 194 GPQIAVFNSELLKQYFNNKGYNFTDEYFFQP-KINT---TLKNYI--------NDK-RQKEKIILVYGRPSV---KRNAF 257 (413)
T ss_dssp SCEEEEEESHHHHHHHHHHTCCCSEEEEECC-CCCH---HHHTTT--------TSC-CCCCSEEEEEECTTC---GGGCH
T ss_pred CceEEEEcCHHHHHHHHHcCCCCCceEEeCC-CcCc---hhhccc--------ccc-cCCCCEEEEEecCch---hccCH
Confidence 4 577788666554 33565567888887 7886 333221 112 234557888998642 16899
Q ss_pred HHHHHHHHHhHHHHHhhccCCC---CeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCC--hhhHHHHHHHcCeEE
Q 001292 431 AVAMHDVGPLLIKYARRNSVEG---SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF--NGDVNGVLLMADIVL 505 (1106)
Q Consensus 431 dlLLeA~k~Ll~k~aklk~~~P---dikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~--~eDL~~LyaaADVfV 505 (1106)
+.+++|++.+.++. | +++ |+++|+++.. .++++.+ +|+|+|. .+++..+|+.||++|
T Consensus 258 ~~li~A~~~l~~~~-------~~~~~~~-l~ivG~~~~~---------~~l~~~~-~v~f~G~~~~~~l~~~~~~adv~v 319 (413)
T 2x0d_A 258 TLIVEALKIFVQKY-------DRSNEWK-IISVGEKHKD---------IALGKGI-HLNSLGKLTLEDYADLLKRSSIGI 319 (413)
T ss_dssp HHHHHHHHHHHHHC-------TTGGGCE-EEEEESCCCC---------EEEETTE-EEEEEESCCHHHHHHHHHHCCEEE
T ss_pred HHHHHHHHHHHHhC-------CCCCceE-EEEEcCCchh---------hhcCCcC-cEEEcCCCCHHHHHHHHHhCCEEE
Confidence 99999998876432 4 377 6889998764 2467776 8999995 489999999999999
Q ss_pred EccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH
Q 001292 506 YGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLH 585 (1106)
Q Consensus 506 ~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ 585 (1106)
+||..| +||++++||||||+|||++ .+|..|++.++.+|+++++.|+++|+++|.++++|++++ ++ ++++.
T Consensus 320 ~pS~~E--~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~~~---~~---~~~~~ 390 (413)
T 2x0d_A 320 SLMISP--HPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNNR---DV---DKKES 390 (413)
T ss_dssp CCCSSS--SCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC-------------CC
T ss_pred EecCCC--CCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHHHH---HH---hHHHH
Confidence 999986 9999999999999999995 567789999999999999999999999999999999984 33 56666
Q ss_pred HHHhcHHHHHHH
Q 001292 586 AKNMLALDCVTR 597 (1106)
Q Consensus 586 ake~fsee~v~~ 597 (1106)
++++.|+.++++
T Consensus 391 ~~~~~W~~~~~~ 402 (413)
T 2x0d_A 391 SNMMFYINEFNE 402 (413)
T ss_dssp BSCGGGCCCC--
T ss_pred HHhCCHHHHHHH
Confidence 767777655443
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=262.81 Aligned_cols=322 Identities=11% Similarity=0.079 Sum_probs=233.1
Q ss_pred CCCCCEEEEEeCCCCCChhHHHHHHHHHH--HHHCCCEEEEEEcCCC---CchHHHHH-----------HhHHHHHhhcc
Q 001292 219 GVRPPRIGLILGNMAKDSRSLLLITVVKN--LQKLGYVFKIYAVRSG---NSHSLWEQ-----------IAGQISILGQE 282 (1106)
Q Consensus 219 g~r~~RIalVlg~L~~gGesl~vv~Laka--Lqe~GyeVtV~t~~dg---~~~~i~r~-----------lg~lvkiIr~~ 282 (1106)
+.+++||+++++.+..+|.+.++.++++. |.+.|++|++++..+. ......+. ...+.+.++..
T Consensus 202 ~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 281 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATSGDDGSTLRTRLAQASTLHDVTALGHLATAKHIRHH 281 (568)
T ss_dssp SSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSCHHHHHHHHTSEEEECTTCCHHHHHHHHHHT
T ss_pred CCCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECCCCCccHHHHHHHhcCeEEECCCCCHHHHHHHHHhC
Confidence 45678999999999999999999999999 7888999999987532 11111111 11255667778
Q ss_pred CccEEEEccccH--HHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEec
Q 001292 283 QYSLIDWSIFDG--IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFP 360 (1106)
Q Consensus 283 ~pDiIh~~~~~~--i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~ 360 (1106)
++|+||.+.... ..+..+. .+..|++++.|+......... ..+..+|.++++
T Consensus 282 ~~Div~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~d~~i~~ 335 (568)
T 2vsy_A 282 GIDLLFDLRGWGGGGRPEVFA------------LRPAPVQVNWLAYPGTSGAPW--------------MDYVLGDAFALP 335 (568)
T ss_dssp TCSEEEECSSCTTCSSCHHHH------------TCCSSEEEEESSSSSCCCCTT--------------CCEEEECTTTSC
T ss_pred CCCEEEECCCCCCcchHHHHh------------cCCCceeEeeecCCcccCCCC--------------ceEEEECCCcCC
Confidence 888887643221 1111111 134688888877432111100 001234555556
Q ss_pred CCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHh
Q 001292 361 DYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPL 440 (1106)
Q Consensus 361 S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~L 440 (1106)
+..... + .+++.+||| .++. ....+.......|+++|++++.+ ++++|++.. |+++.+++|+..+
T Consensus 336 s~~~~~----~-~~~i~~ipn-~~~~---~~~~~~~~~~~~r~~~~~~~~~~-v~~~g~~~~-----K~~~~li~a~~~l 400 (568)
T 2vsy_A 336 PALEPF----Y-SEHVLRLQG-AFQP---SDTSRVVAEPPSRTQCGLPEQGV-VLCCFNNSY-----KLNPQSMARMLAV 400 (568)
T ss_dssp TTTGGG----C-SSEEEECSS-CSCC---CCTTCCCCCCCCTGGGTCCTTSC-EEEECCCGG-----GCCHHHHHHHHHH
T ss_pred cccccC----C-cceeEcCCC-cCCC---CCCCCCCCCCCCccccCCCCCCE-EEEeCCccc-----cCCHHHHHHHHHH
Confidence 554332 2 268999998 4543 11111111223577889877664 558887542 7889999999888
Q ss_pred HHHHHhhccCCCCeEEEEEEc-CCCCccHHHHHHHHHHcCCC-CCcEEEcCCh--hhHHHHHHHcCeEEEccCCCCCCCc
Q 001292 441 LIKYARRNSVEGSFKFVFLCG-NSTDGYNDALQEVASRLGLL-EHSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQGFP 516 (1106)
Q Consensus 441 l~k~aklk~~~PdikfLIIVG-~GperY~eeLkeLaeklGL~-d~rV~flG~~--eDL~~LyaaADVfV~PS~~EeEGFG 516 (1106)
.++. |+++ |+|+| +++.. +.++++++++|+. + +|+|+|+. +++..+|+.||++|+||.+ |||
T Consensus 401 ~~~~-------~~~~-l~i~G~~g~~~--~~l~~~~~~~~l~~~-~v~~~g~~~~~~~~~~~~~adv~v~ps~~---~~g 466 (568)
T 2vsy_A 401 LREV-------PDSV-LWLLSGPGEAD--ARLRAFAHAQGVDAQ-RLVFMPKLPHPQYLARYRHADLFLDTHPY---NAH 466 (568)
T ss_dssp HHHC-------TTCE-EEEECCSTTHH--HHHHHHHHHTTCCGG-GEEEECCCCHHHHHHHGGGCSEEECCSSS---CCS
T ss_pred HHhC-------CCcE-EEEecCCHHHH--HHHHHHHHHcCCChh-HEEeeCCCCHHHHHHHHhcCCEEeeCCCC---CCc
Confidence 6433 7887 68888 78754 9999999999998 6 99999977 5899999999999999986 999
Q ss_pred HHHHHHHHhCCCEEe-------cCCC-------CchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHH
Q 001292 517 SLIVRAMTFGIPVIT-------PDFP-------IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAG 582 (1106)
Q Consensus 517 lvLLEAMA~G~PVIA-------SD~g-------GI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~A 582 (1106)
++++||||||+|||+ ++.+ |++|+|.+ |+++++++|..+++|+++ +.+|++++
T Consensus 467 ~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~----------~~~~la~~i~~l~~~~~~---~~~~~~~~ 533 (568)
T 2vsy_A 467 TTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA----------DDAAFVAKAVALASDPAA---LTALHARV 533 (568)
T ss_dssp HHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS----------SHHHHHHHHHHHHHCHHH---HHHHHHHH
T ss_pred HHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC----------CHHHHHHHHHHHhcCHHH---HHHHHHHH
Confidence 999999999999999 9999 99998844 899999999999999987 68899999
Q ss_pred HHHH---HHhcHHHHHHHHHHHHHHHhcC
Q 001292 583 RLHA---KNMLALDCVTRYARILENVLNF 608 (1106)
Q Consensus 583 re~a---ke~fsee~v~~Y~eLyeslLk~ 608 (1106)
++.+ ..+.++..+.+|.++|++++..
T Consensus 534 ~~~~~~~~~f~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 534 DVLRRASGVFHMDGFADDFGALLQALARR 562 (568)
T ss_dssp HHHHHHSSTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9998 4455677777999999988764
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-25 Score=250.75 Aligned_cols=301 Identities=12% Similarity=0.023 Sum_probs=216.0
Q ss_pred CCCccccccCCCCCCCCCCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHHHH--------------
Q 001292 205 FGNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWE-------------- 270 (1106)
Q Consensus 205 ~~~~~~ha~Sv~r~g~r~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i~r-------------- 270 (1106)
++.+|.|++|+ |+...+.+|+++|.+.| +|.+++.+++......+
T Consensus 40 ~~~iwih~~s~--------------------G~~~~~~~L~~~L~~~~-~v~v~~~~~~~~~~~~~~~~~v~~~~~~p~~ 98 (374)
T 2xci_A 40 KGALWVHTASI--------------------GEFNTFLPILKELKREH-RILLTYFSPRAREYLKTKSDFYDCLHPLPLD 98 (374)
T ss_dssp TTCEEEECSSH--------------------HHHHHHHHHHHHHHHHS-CEEEEESCGGGHHHHHTTGGGCSEEEECCCS
T ss_pred CCCEEEEcCCH--------------------HHHHHHHHHHHHHHhcC-CEEEEEcCCcHHHHHHHhcccccceeECCCC
Confidence 46689999999 99999999999999999 88877765433211100
Q ss_pred HHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHH
Q 001292 271 QIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSV 350 (1106)
Q Consensus 271 ~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~ 350 (1106)
....+.++++..+||++++...... .. +... . .. |++...+.. ..+. .++..
T Consensus 99 ~~~~l~~~l~~~~pDiv~~~~~~~~-~~-~~~~-~---------~~-p~~~~~~~~--~~~~-------------~~~~~ 150 (374)
T 2xci_A 99 NPFSVKRFEELSKPKALIVVEREFW-PS-LIIF-T---------KV-PKILVNAYA--KGSL-------------IEKIL 150 (374)
T ss_dssp SHHHHHHHHHHHCCSEEEEESCCCC-HH-HHHH-C---------CS-CEEEEEECC--CCCH-------------HHHHH
T ss_pred CHHHHHHHHHHhCCCEEEEECccCc-HH-HHHH-H---------hC-CEEEEEeec--CchH-------------HHHHH
Confidence 0112456666778888776432210 11 1110 1 22 766553321 1111 12345
Q ss_pred hccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccC
Q 001292 351 FSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSW 428 (1106)
Q Consensus 351 l~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~K 428 (1106)
++.+|.++++|....+. ..+++ ++.+|+|..++. ... + +.. + ..++++++|+ + .|
T Consensus 151 ~~~~d~ii~~S~~~~~~l~~~g~~--ki~vi~n~~f~~---~~~-~-------~~~--l--~~~vi~~~~~----~--~k 207 (374)
T 2xci_A 151 SKKFDLIIMRTQEDVEKFKTFGAK--RVFSCGNLKFIC---QKG-K-------GIK--L--KGEFIVAGSI----H--TG 207 (374)
T ss_dssp HTTCSEEEESCHHHHHHHHTTTCC--SEEECCCGGGCC---CCC-S-------CCC--C--SSCEEEEEEE----C--GG
T ss_pred HHhCCEEEECCHHHHHHHHHcCCC--eEEEcCCCccCC---CcC-h-------hhh--h--cCCEEEEEeC----C--Cc
Confidence 78899999999877665 33454 899999854443 110 1 111 1 1256776663 2 46
Q ss_pred CHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCC-------CcEEEcCChhhHHHHHHHc
Q 001292 429 DYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLE-------HSVRHYGFNGDVNGVLLMA 501 (1106)
Q Consensus 429 g~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d-------~rV~flG~~eDL~~LyaaA 501 (1106)
|++.+++|++.+.+ ..|+++ |+|+|+|+++ .++++++++++|+.. ++|.+.|+.+|+..+|+.|
T Consensus 208 ~~~~ll~A~~~l~~-------~~p~~~-lvivG~g~~~-~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~a 278 (374)
T 2xci_A 208 EVEIILKAFKEIKK-------TYSSLK-LILVPRHIEN-AKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVG 278 (374)
T ss_dssp GHHHHHHHHHHHHT-------TCTTCE-EEEEESSGGG-HHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGE
T ss_pred hHHHHHHHHHHHHh-------hCCCcE-EEEECCCHHH-HHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhC
Confidence 89999999987753 337887 6889999875 568999999999861 2699999999999999999
Q ss_pred CeEEEccCCCCCCCcHHHHHHHHhCCCEEec-CCCCchhhhccC-CeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHH
Q 001292 502 DIVLYGSSQVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEG-AQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVA 579 (1106)
Q Consensus 502 DVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS-D~gGI~EiV~Dg-~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mG 579 (1106)
|++|+||+++ |++|++++||||||+|||++ +.++++|++.+. .+|++++++|+++|+++|.++++| ++ +++|+
T Consensus 279 Dv~vl~ss~~-e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d-~~---r~~mg 353 (374)
T 2xci_A 279 KIAIVGGTFV-NIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV-KK---EIKVE 353 (374)
T ss_dssp EEEEECSSSS-SSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS-CC---CCCHH
T ss_pred CEEEECCccc-CCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH-HH---HHHHH
Confidence 9999998875 58899999999999999975 789999988653 478889999999999999999999 87 58899
Q ss_pred HHHHHHHHHhcH
Q 001292 580 SAGRLHAKNMLA 591 (1106)
Q Consensus 580 e~Are~ake~fs 591 (1106)
++|++.+++++.
T Consensus 354 ~~ar~~~~~~~g 365 (374)
T 2xci_A 354 EKSREIKGCYLE 365 (374)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhccc
Confidence 999999987654
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8e-25 Score=244.15 Aligned_cols=335 Identities=10% Similarity=0.065 Sum_probs=223.2
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHCC-CEEEEEEcCCCC--chHHH-------------------------HHHhH
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLG-YVFKIYAVRSGN--SHSLW-------------------------EQIAG 274 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~G-yeVtV~t~~dg~--~~~i~-------------------------r~lg~ 274 (1106)
+||+++.+.. ++...+.+++++|+++| +++.|+..+... ..... ..+..
T Consensus 1 mkIl~v~~~~---~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (384)
T 1vgv_A 1 MKVLTVFGTR---PEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEG 77 (384)
T ss_dssp CEEEEEECSH---HHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHHHHHH
T ss_pred CeEEEEeccc---HHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHcCCCCCcceecCCCCccHHHHHHHHHHH
Confidence 5789888762 45667789999999998 488766443211 11111 11222
Q ss_pred HHHHhhccCccEEEEccc-cHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhcc
Q 001292 275 QISILGQEQYSLIDWSIF-DGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSR 353 (1106)
Q Consensus 275 lvkiIr~~~pDiIh~~~~-~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~ 353 (1106)
+.++++..+||+||.+.. ...+...+..+ ..++|+|++.|+..........+ ...... ...+.
T Consensus 78 l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~----------~~~ip~v~~~~~~~~~~~~~~~~----~~~~~~--~~~~~ 141 (384)
T 1vgv_A 78 LKPILAEFKPDVVLVHGDTTTTLATSLAAF----------YQRIPVGHVEAGLRTGDLYSPWP----EEANRT--LTGHL 141 (384)
T ss_dssp HHHHHHHHCCSEEEEETTCHHHHHHHHHHH----------TTTCCEEEESCCCCCSCTTSSTT----HHHHHH--HHHTT
T ss_pred HHHHHHHhCCCEEEEeCCchHHHHHHHHHH----------HHCCCEEEEecccccccccCCCc----hHhhHH--HHHhh
Confidence 566777789999999864 33444444432 26899999877742111100000 111111 11346
Q ss_pred ccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcch------hHHHHHHHcC-CCC-CcEEEEEEcccCcc
Q 001292 354 VNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSH------EKYQLRKENG-FLK-DEIVVVVVGSSFFY 423 (1106)
Q Consensus 354 AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~------s~~~LR~~lG-L~~-d~~VIL~VGRl~~y 423 (1106)
+|.+++++...... ..+++++++.+|+|..+|. ..+.+.. ....+++++| +++ +.++++++||+..
T Consensus 142 ~d~ii~~s~~~~~~l~~~g~~~~~i~vi~n~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~- 217 (384)
T 1vgv_A 142 AMYHFSPTETSRQNLLRENVADSRIFITGNTVIDA---LLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRES- 217 (384)
T ss_dssp CSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHH---HHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSS-
T ss_pred ccEEEcCcHHHHHHHHHcCCChhhEEEeCChHHHH---HHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccc-
Confidence 99999998765544 3467777899999832453 1111110 1135677788 744 4467889998765
Q ss_pred cccc-CCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHH
Q 001292 424 NELS-WDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLM 500 (1106)
Q Consensus 424 ~kg~-Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~Lyaa 500 (1106)
. |+++.+++|+..+.++. |++++++++|.++. +.+.+++++. ..+ +|.|+|.. +++..+|+.
T Consensus 218 ---~~kg~~~li~a~~~l~~~~-------~~~~l~i~~g~~~~-~~~~l~~~~~---~~~-~v~~~g~~~~~~~~~~~~~ 282 (384)
T 1vgv_A 218 ---FGRGFEEICHALADIATTH-------QDIQIVYPVHLNPN-VREPVNRILG---HVK-NVILIDPQEYLPFVWLMNH 282 (384)
T ss_dssp ---CCHHHHHHHHHHHHHHHHC-------TTEEEEEECCBCHH-HHHHHHHHHT---TCT-TEEEECCCCHHHHHHHHHH
T ss_pred ---cchHHHHHHHHHHHHHhhC-------CCeEEEEEcCCCHH-HHHHHHHHhh---cCC-CEEEeCCCCHHHHHHHHHh
Confidence 4 78999999998876432 67874433454431 2355555543 234 89996632 789999999
Q ss_pred cCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCC-CCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHH
Q 001292 501 ADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF-PIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVA 579 (1106)
Q Consensus 501 ADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~-gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mG 579 (1106)
||++|+|| . .+++||||||+|||+++. ++..+++.++ +|+++++ |+++|+++|.++++|++. +++|+
T Consensus 283 ad~~v~~S--g-----~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll~d~~~---~~~~~ 350 (384)
T 1vgv_A 283 AWLILTDS--G-----GIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKDENE---YQAMS 350 (384)
T ss_dssp CSEEEESS--S-----TGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEECS-SHHHHHHHHHHHHHCHHH---HHHHH
T ss_pred CcEEEECC--c-----chHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEeCC-CHHHHHHHHHHHHhChHH---Hhhhh
Confidence 99999998 2 238999999999999986 8999999888 9999987 999999999999999987 58899
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 001292 580 SAGRLHAKNMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 580 e~Are~ake~fsee~v~~Y~eLyeslLk 607 (1106)
++++++...+.++..++.+.++|+++++
T Consensus 351 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 378 (384)
T 1vgv_A 351 RAHNPYGDGQACSRILEALKNNRISLGS 378 (384)
T ss_dssp SSCCTTCCSCHHHHHHHHHHHTCCCC--
T ss_pred hccCCCcCCCHHHHHHHHHHHHHHhhcc
Confidence 9888876555556666677777665543
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-24 Score=237.95 Aligned_cols=328 Identities=11% Similarity=0.051 Sum_probs=216.4
Q ss_pred CCEEEEEeCCCCCChhHHHHHHHHHHHHHC-C-CEEEEEEcCCCCc--hHHH-------------------------HHH
Q 001292 222 PPRIGLILGNMAKDSRSLLLITVVKNLQKL-G-YVFKIYAVRSGNS--HSLW-------------------------EQI 272 (1106)
Q Consensus 222 ~~RIalVlg~L~~gGesl~vv~LakaLqe~-G-yeVtV~t~~dg~~--~~i~-------------------------r~l 272 (1106)
++||+++++.. ++...+.++++.|++. | ++|.+++...+.. .... ..+
T Consensus 8 ~mkIl~v~~~~---~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (375)
T 3beo_A 8 RLKVMTIFGTR---PEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDITTRGL 84 (375)
T ss_dssp CEEEEEEECSH---HHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHHTCCCSEECCCCCTTCCHHHHHHHHH
T ss_pred CceEEEEecCc---HHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHcCCCCccccccCCCcccHHHHHHHHH
Confidence 47999998663 3344567899999887 5 8887766543210 1100 011
Q ss_pred hHHHHHhhccCccEEEEccc-cHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHh
Q 001292 273 AGQISILGQEQYSLIDWSIF-DGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVF 351 (1106)
Q Consensus 273 g~lvkiIr~~~pDiIh~~~~-~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l 351 (1106)
..+.++++..+||+||++.. ...+...+..+. .++|+|++.|+...... +... ...+... ...
T Consensus 85 ~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~----------~~ip~v~~~~~~~~~~~--~~~~--~~~~~~~--~~~ 148 (375)
T 3beo_A 85 EGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFY----------NQIPVGHVEAGLRTWDK--YSPY--PEEMNRQ--LTG 148 (375)
T ss_dssp HHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHH----------TTCCEEEESCCCCCSCT--TSST--THHHHHH--HHH
T ss_pred HHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHH----------HCCCEEEEecccccccc--cCCC--hhHhhhh--HHh
Confidence 12456677789999999764 233333333322 57999987665421110 0000 0111111 112
Q ss_pred ccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcch-hHHHHHHHcCCCCCcEEEEEEcccCcccccc-
Q 001292 352 SRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSH-EKYQLRKENGFLKDEIVVVVVGSSFFYNELS- 427 (1106)
Q Consensus 352 ~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~-s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~- 427 (1106)
+.+|.+++++...... ..+++++++.+|+|..+|. ..+.+.. ....++.++ +++.++++++||+.. .
T Consensus 149 ~~~d~ii~~s~~~~~~~~~~g~~~~~i~vi~n~~~d~---~~~~~~~~~~~~~~~~~--~~~~~vl~~~gr~~~----~~ 219 (375)
T 3beo_A 149 VMADLHFSPTAKSATNLQKENKDESRIFITGNTAIDA---LKTTVKETYSHPVLEKL--GNNRLVLMTAHRREN----LG 219 (375)
T ss_dssp HHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHH---HHHHCCSSCCCHHHHTT--TTSEEEEEECCCGGG----TT
T ss_pred hhhheeeCCCHHHHHHHHHcCCCcccEEEECChhHhh---hhhhhhhhhhHHHHHhc--cCCCeEEEEeccccc----ch
Confidence 3489999998766554 3466777899999833776 3332221 123345554 345667788887654 4
Q ss_pred CCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHc-CCCCCcEEEcCCh--hhHHHHHHHcCeE
Q 001292 428 WDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRL-GLLEHSVRHYGFN--GDVNGVLLMADIV 504 (1106)
Q Consensus 428 Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaekl-GL~d~rV~flG~~--eDL~~LyaaADVf 504 (1106)
|+++.+++|++.+.++. |+++ + ++|.|++ ..+++.++++ +..+ +|+|+|.. .++..+|+.||++
T Consensus 220 K~~~~li~a~~~l~~~~-------~~~~-~-i~~~g~~---~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~ad~~ 286 (375)
T 3beo_A 220 EPMRNMFRAIKRLVDKH-------EDVQ-V-VYPVHMN---PVVRETANDILGDYG-RIHLIEPLDVIDFHNVAARSYLM 286 (375)
T ss_dssp HHHHHHHHHHHHHHHHC-------TTEE-E-EEECCSC---HHHHHHHHHHHTTCT-TEEEECCCCHHHHHHHHHTCSEE
T ss_pred hHHHHHHHHHHHHHhhC-------CCeE-E-EEeCCCC---HHHHHHHHHHhhccC-CEEEeCCCCHHHHHHHHHhCcEE
Confidence 78999999998876432 6776 3 3466664 3344444433 3334 89997743 4899999999999
Q ss_pred EEccCCCCCCCcHHHHHHHHhCCCEEecC-CCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Q 001292 505 LYGSSQVEQGFPSLIVRAMTFGIPVITPD-FPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGR 583 (1106)
Q Consensus 505 V~PS~~EeEGFGlvLLEAMA~G~PVIASD-~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Ar 583 (1106)
|+|| |.+++||||||+|||+++ +++.+|++.++ +|+++++ |+++|+++|.++++|+++ +++|+++++
T Consensus 287 v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v~~-d~~~la~~i~~ll~~~~~---~~~~~~~~~ 354 (375)
T 3beo_A 287 LTDS-------GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLAGT-DEETIFSLADELLSDKEA---HDKMSKASN 354 (375)
T ss_dssp EECC-------HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEECCS-CHHHHHHHHHHHHHCHHH---HHHHCCCCC
T ss_pred EECC-------CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEcCC-CHHHHHHHHHHHHhChHh---HhhhhhcCC
Confidence 9997 466999999999999996 59999999888 9999986 999999999999999987 588998888
Q ss_pred HHHHHhcHHHHHHHHHHHH
Q 001292 584 LHAKNMLALDCVTRYARIL 602 (1106)
Q Consensus 584 e~ake~fsee~v~~Y~eLy 602 (1106)
+++..+.++.+++.+.+++
T Consensus 355 ~~~~~~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 355 PYGDGRASERIVEAILKHF 373 (375)
T ss_dssp TTCCSCHHHHHHHHHHHHT
T ss_pred CCCCCcHHHHHHHHHHHHh
Confidence 8775555566666666654
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-24 Score=245.98 Aligned_cols=250 Identities=14% Similarity=0.143 Sum_probs=177.8
Q ss_pred CccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCC
Q 001292 283 QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDY 362 (1106)
Q Consensus 283 ~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~ 362 (1106)
++|+||++......+..+..+ .++|+|+++|+.......... ..........++.+|.|++.|.
T Consensus 124 ~~DvIh~~~~~~~~~~~~~~~-----------~~~p~v~~~h~~~~~~~~~~~-----~~~~~~~~~~~~~ad~vi~~S~ 187 (406)
T 2hy7_A 124 ESDVIVFESGIAVAFIELAKR-----------VNPAAKLVYRASDGLSTINVA-----SYIEREFDRVAPTLDVIALVSP 187 (406)
T ss_dssp HCSEEEEESSGGGGGHHHHHH-----------HCTTSEEEEEESSCHHHHTCC-----HHHHHHHHHHGGGCSEEEESCG
T ss_pred CCCEEEECCchHHHHHHHHHH-----------hCCCEEEEEeccchhhccccc-----HHHHHHHHHHHHhCCEEEEcCH
Confidence 578888544332222222221 468999999985431101000 1111223456889999999998
Q ss_pred ChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHH
Q 001292 363 TLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLI 442 (1106)
Q Consensus 363 ~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~ 442 (1106)
.......... ++.+||| |+|. +.|.+... ...++.++|+++|++.+ .||+ +.++ .+
T Consensus 188 ~~~~~~~~~~--~i~vipn-gvd~---~~f~~~~~--------~~~~~~~~i~~vGrl~~----~Kg~---~~~l---~~ 243 (406)
T 2hy7_A 188 AMAAEVVSRD--NVFHVGH-GVDH---NLDQLGDP--------SPYAEGIHAVAVGSMLF----DPEF---FVVA---SK 243 (406)
T ss_dssp GGGGGCSCST--TEEECCC-CBCT---THHHHHCS--------CSCCSSEEEEEECCTTB----CHHH---HHHH---HH
T ss_pred HHHHHHHhcC--CEEEEcC-CcCh---HhcCcccc--------cccCCCcEEEEEecccc----ccCH---HHHH---HH
Confidence 7766533332 8999998 8997 44432110 01123389999999987 6676 3222 21
Q ss_pred HHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccCCCCCCCcHHHH
Q 001292 443 KYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQGFPSLIV 520 (1106)
Q Consensus 443 k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~~EeEGFGlvLL 520 (1106)
..|+++ |+|+|+|+ ++++++.+ +|.|+|.. +++..+|+.||++|+||..| +||++++
T Consensus 244 -------~~~~~~-l~ivG~g~----------~~~~~l~~-~V~f~G~~~~~~l~~~~~~adv~v~ps~~E--~~~~~~l 302 (406)
T 2hy7_A 244 -------AFPQVT-FHVIGSGM----------GRHPGYGD-NVIVYGEMKHAQTIGYIKHARFGIAPYASE--QVPVYLA 302 (406)
T ss_dssp -------HCTTEE-EEEESCSS----------CCCTTCCT-TEEEECCCCHHHHHHHHHTCSEEECCBSCS--CCCTTHH
T ss_pred -------hCCCeE-EEEEeCch----------HHhcCCCC-CEEEcCCCCHHHHHHHHHhcCEEEECCCcc--cCchHHH
Confidence 137888 68889886 45567877 99999965 68999999999999999986 9999999
Q ss_pred HHH-------HhCCCEEecCCCCchhhhccCCeEEE-EcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHH
Q 001292 521 RAM-------TFGIPVITPDFPIIKEYVAEGAQVIF-FQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLAL 592 (1106)
Q Consensus 521 EAM-------A~G~PVIASD~gGI~EiV~Dg~nG~L-V~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fse 592 (1106)
||| |||+|||+++. +.++.+|++ ++++|+++|+++|.++++|++. ..++++.|+
T Consensus 303 EAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v~~~d~~~la~ai~~ll~~~~~------------~~~~~~sw~ 364 (406)
T 2hy7_A 303 DSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGYTPGNADSVIAAITQALEAPRV------------RYRQCLNWS 364 (406)
T ss_dssp HHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEECTTCHHHHHHHHHHHHHCCCC------------CCSCCCBHH
T ss_pred HHHHHHHHHhhCCCcEEEehh------cccCcceEEEeCCCCHHHHHHHHHHHHhCcch------------hhhhcCCHH
Confidence 999 99999999988 667789999 9999999999999999999872 223567788
Q ss_pred HHHHHHHHH--HHHHhcCCCC
Q 001292 593 DCVTRYARI--LENVLNFPSD 611 (1106)
Q Consensus 593 e~v~~Y~eL--yeslLk~Ps~ 611 (1106)
..++++.++ |+++...|.+
T Consensus 365 ~~a~~~~~~~~y~~~~~~~~~ 385 (406)
T 2hy7_A 365 DTTDRVLDPRAYPETRLYPHP 385 (406)
T ss_dssp HHHHHHHCGGGSGGGBSSCCC
T ss_pred HHHHHHHHhhcccccCcCCCC
Confidence 888899999 8877655443
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=213.56 Aligned_cols=186 Identities=13% Similarity=0.113 Sum_probs=156.5
Q ss_pred eCCCCCCcccccccC--cchh-----HHHHHHHcCCCCCcEEEEEEcccC-ccccccCCHHHHHHHHHHhHHHHHhhccC
Q 001292 379 IPGSPADVWAVEAYS--KSHE-----KYQLRKENGFLKDEIVVVVVGSSF-FYNELSWDYAVAMHDVGPLLIKYARRNSV 450 (1106)
Q Consensus 379 IpN~GVDl~~~e~F~--ps~s-----~~~LR~~lGL~~d~~VIL~VGRl~-~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~ 450 (1106)
||| |+|. +.|. +... +..+|++++++++ ++|+++|++. . .|+.+.+++|++.+.. ...
T Consensus 2 ipn-gvd~---~~f~~~~~~~~~~~~~~~~r~~~~~~~~-~~i~~~G~~~~~----~K~~~~li~a~~~l~~-----~~~ 67 (200)
T 2bfw_A 2 SHN-GIDC---SFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRG----QKGVDVLLKAIEILSS-----KKE 67 (200)
T ss_dssp ----CCCT---TTSSGGGSCSCHHHHHHHHHHHTTCCSC-EEEEEESCBCSS----SSCHHHHHHHHHHHTT-----SGG
T ss_pred CCC-ccCh---hhccccccccchhhHHHHHHHHcCCCCC-CEEEEeeccccc----cCCHHHHHHHHHHHHh-----hcc
Confidence 576 7998 6776 5432 6678999999754 5999999988 7 8999999999977640 012
Q ss_pred CCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEE-cCChh--hHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCC
Q 001292 451 EGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRH-YGFNG--DVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI 527 (1106)
Q Consensus 451 ~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~f-lG~~e--DL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~ 527 (1106)
.|+++ |+|+|.++..+.+.+++++++++ +|+| .|+.. ++..+|+.||++|+||..| +||++++||||+|+
T Consensus 68 ~~~~~-l~i~G~~~~~~~~~l~~~~~~~~----~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e--~~~~~~~Ea~a~G~ 140 (200)
T 2bfw_A 68 FQEMR-FIIIGKGDPELEGWARSLEEKHG----NVKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGA 140 (200)
T ss_dssp GGGEE-EEEECCBCHHHHHHHHHHHHHCT----TEEEECSCCCHHHHHHHHTTCSEEEECCSCC--SSCHHHHHHHHTTC
T ss_pred CCCeE-EEEECCCChHHHHHHHHHHHhcC----CEEEEeccCCHHHHHHHHHHCCEEEECCCCC--CccHHHHHHHHCCC
Confidence 26788 68899987323488999999876 6999 99764 8999999999999999986 99999999999999
Q ss_pred CEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHh-CcccHHHHHHHHHHHHHHHHHhc
Q 001292 528 PVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS-NGKLSKFARTVASAGRLHAKNML 590 (1106)
Q Consensus 528 PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLs-DpelRk~r~~mGe~Are~ake~f 590 (1106)
|||+++.+++.+++ ++.+|++++++|+++++++|.++++ |++. +.+|++++++.+++ |
T Consensus 141 PvI~~~~~~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~---~~~~~~~a~~~~~~-f 199 (200)
T 2bfw_A 141 IPIASAVGGLRDII-TNETGILVKAGDPGELANAILKALELSRSD---LSKFRENCKKRAMS-F 199 (200)
T ss_dssp EEEEESCHHHHHHC-CTTTCEEECTTCHHHHHHHHHHHHHCCHHH---HHHHHHHHHHHHHH-T
T ss_pred CEEEeCCCChHHHc-CCCceEEecCCCHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHh-c
Confidence 99999999999999 8899999999999999999999999 9987 68899999999887 5
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.3e-22 Score=237.66 Aligned_cols=303 Identities=10% Similarity=0.100 Sum_probs=202.8
Q ss_pred cCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccc------ccchhhh-hh--h---------HHhH
Q 001292 282 EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLA------NRLPVYV-ER--G---------FQNL 343 (1106)
Q Consensus 282 ~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls------~r~~~Y~-~~--g---------lekl 343 (1106)
..++++|+|.+...++..+.++. ...+|+|+|+|+..+. .....|. .. + +...
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~---------~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~ 250 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKR---------RIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHR 250 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHT---------TCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHh---------CCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHH
Confidence 45899999999988877666643 2589999999995311 1111111 00 0 0112
Q ss_pred HHHHHHHhccccEEEecCCChhhh---hcCCCCCCEEEeCCCCCCcccccccCcch--------hHHHHHHH--------
Q 001292 344 LSYWKSVFSRVNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSH--------EKYQLRKE-------- 404 (1106)
Q Consensus 344 is~~~~~l~~AD~VIa~S~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~ps~--------s~~~LR~~-------- 404 (1106)
....+..+..||.|+++|...+.. ..+.+.+. +||| |||. +.|.|.. .+..+.+.
T Consensus 251 ~~~EKaga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~--iIpN-GID~---~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~ 324 (725)
T 3nb0_A 251 YCIERAAAHSADVFTTVSQITAFEAEHLLKRKPDG--ILPN-GLNV---IKFQAFHEFQNLHALKKEKINDFVRGHFHGC 324 (725)
T ss_dssp HHHHHHHHHHSSEEEESSHHHHHHHHHHTSSCCSE--ECCC-CBCC---CCCSSTTHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHhCCEEEECCHHHHHHHHHHhcCCCCE--EEcC-Cccc---cccCcchhhHHHHHHHHHHHHHHHHhhcccC
Confidence 223344567999999999665544 23444443 3998 8998 6776641 12222221
Q ss_pred cCCC-CCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCcc----------------
Q 001292 405 NGFL-KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGY---------------- 467 (1106)
Q Consensus 405 lGL~-~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY---------------- 467 (1106)
++++ ++.+++..+||+.. .+||.+++++|+.+|............-+.| ||++.+...+
T Consensus 325 l~l~~dk~liifivgRle~---~nKGiDl~ieAl~~L~~~l~~~~~~~~vvaf-ii~p~~~~~~~~~~l~~~~~~~~l~~ 400 (725)
T 3nb0_A 325 FDFDLDNTLYFFIAGRYEY---KNKGADMFIEALARLNYRLKVSGSKKTVVAF-IVMPAKNNSFTVEALKGQAEVRALEN 400 (725)
T ss_dssp CCSCGGGEEEEEEESSCCT---TTTTHHHHHHHHHHHHHHHHHTTCCCEEEEE-EECCCCEEEECHHHHHHHHHHHHHHH
T ss_pred CCCCCCceeEEEEEEEecc---ccCCHHHHHHHHHHHHHHHhhccCCCcEEEE-EEeCCCCCCCchhhhcchhHHHHHHH
Confidence 2454 34456666899872 2899999999999987543222222233444 6666543221
Q ss_pred -----------------------------------------------------------------------HHHHHHHHH
Q 001292 468 -----------------------------------------------------------------------NDALQEVAS 476 (1106)
Q Consensus 468 -----------------------------------------------------------------------~eeLkeLae 476 (1106)
.+.+...++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r 480 (725)
T 3nb0_A 401 TVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIR 480 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHH
Confidence 112223345
Q ss_pred HcCCCC-----CcEEEcC-Ch--------hhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhc
Q 001292 477 RLGLLE-----HSVRHYG-FN--------GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVA 542 (1106)
Q Consensus 477 klGL~d-----~rV~flG-~~--------eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~ 542 (1106)
++++.+ ..|+|.+ +. .++..+|+.||++|+||.+| +||++++||||||+|||+++.+|+.+.|.
T Consensus 481 ~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~E--gfGl~~LEAmA~G~PvI~s~~gG~~d~V~ 558 (725)
T 3nb0_A 481 QVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYE--PWGYTPAECTVMGVPSITTNVSGFGSYME 558 (725)
T ss_dssp HHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSB--SSCHHHHHHHHTTCCEEEETTBHHHHHHH
T ss_pred hcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccC--CCCHHHHHHHHcCCCEEEeCCCChhhhhh
Confidence 566654 1267775 22 26899999999999999997 99999999999999999999999999998
Q ss_pred cC-------CeEEEEc---CCCHHHHHHHHHHHHh-----CcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 001292 543 EG-------AQVIFFQ---KDNPEGLSRAFSLFIS-----NGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 543 Dg-------~nG~LV~---~~D~eeLAeAI~~LLs-----DpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk 607 (1106)
++ .+|++++ +.|+++++++|.+++. ++.. +..|+.++++.++++.|+.++..|.++|+.++.
T Consensus 559 dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~---r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~ 635 (725)
T 3nb0_A 559 DLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQ---RINQRNATEALSDLLDWKRMGLEYVKARQLALR 635 (725)
T ss_dssp TTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHH---HHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 75 3698884 3466666666655553 3433 578899999999888899999999999999876
Q ss_pred C
Q 001292 608 F 608 (1106)
Q Consensus 608 ~ 608 (1106)
.
T Consensus 636 ~ 636 (725)
T 3nb0_A 636 R 636 (725)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.8e-22 Score=232.92 Aligned_cols=286 Identities=10% Similarity=-0.009 Sum_probs=198.1
Q ss_pred CccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCC
Q 001292 283 QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDY 362 (1106)
Q Consensus 283 ~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~ 362 (1106)
.+|+||+|.+...++..+..+. ..++|++++.|..- .....+........+ ...+-.+|.+.+++.
T Consensus 123 ~~DiV~vHdyhl~~l~~~lr~~---------~~~~~i~~~~H~pf-p~~~~~~~lp~~~~i----l~~ll~~d~i~f~~~ 188 (482)
T 1uqt_A 123 DDDIIWIHDYHLLPFAHELRKR---------GVNNRIGFFLHIPF-PTPEIFNALPTYDTL----LEQLCDYDLLGFQTE 188 (482)
T ss_dssp TTCEEEEESGGGTTHHHHHHHT---------TCCSCEEEECCSCC-CCHHHHTTSTTHHHH----HHHHTTSSEEEESSH
T ss_pred CCCEEEEECchHHHHHHHHHHh---------CCCCcEEEEEcCCC-CCHHHHhhCccHHHH----HHhhhccCeEEEECH
Confidence 4699999998876666665542 24789999999831 100000000000111 111224455444432
Q ss_pred Chhhh--------------------hcCCCCCCEEEeCCCCCCcccccccCcchh------HHHHHHHcCCCCCcEEEEE
Q 001292 363 TLPML--------------------YSVLDAGNFFVIPGSPADVWAVEAYSKSHE------KYQLRKENGFLKDEIVVVV 416 (1106)
Q Consensus 363 ~~~~~--------------------~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s------~~~LR~~lGL~~d~~VIL~ 416 (1106)
..... +.+ ...++.+||| |||. +.|.+... ...+|++++ ++++|++
T Consensus 189 ~~~~~f~~~~~~~l~~~~~~~~~~~~~g-~~~~v~vip~-GID~---~~f~~~~~~~~~~~~~~lr~~~~---~~~vil~ 260 (482)
T 1uqt_A 189 NDRLAFLDCLSNLTRVTTRSAKSHTAWG-KAFRTEVYPI-GIEP---KEIAKQAAGPLPPKLAQLKAELK---NVQNIFS 260 (482)
T ss_dssp HHHHHHHHHHHHHSCEEEETTTEEEETT-EEEEEEECCC-CCCH---HHHHHHHHSCCCHHHHHHHHHTT---TCEEEEE
T ss_pred HHHHHHHHHHHHHhCCccccCCeEEECC-eEEEEEEEec-cCCH---HHHHHHhcCcchHHHHHHHHHhC---CCEEEEE
Confidence 11110 111 2346889997 8998 55543211 456788876 6789999
Q ss_pred EcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCC-----CC--ccHHHHHHHHHHcC----CCC-Cc
Q 001292 417 VGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNS-----TD--GYNDALQEVASRLG----LLE-HS 484 (1106)
Q Consensus 417 VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~G-----pe--rY~eeLkeLaeklG----L~d-~r 484 (1106)
+||+.+ .||++.+|+|++.++++++.. ..+++ |+++|.. ++ .+.+++++++.+++ ..+ ..
T Consensus 261 VgRl~~----~Kgi~~ll~A~~~ll~~~p~~---~~~v~-Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~ 332 (482)
T 1uqt_A 261 VERLDY----SKGLPERFLAYEALLEKYPQH---HGKIR-YTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTP 332 (482)
T ss_dssp ECCBCG----GGCHHHHHHHHHHHHHHCGGG---TTTEE-EEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCS
T ss_pred EeCCcc----cCCHHHHHHHHHHHHHhCccc---cCcEE-EEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCce
Confidence 999998 999999999999988654221 13466 5677742 21 12345566665432 211 13
Q ss_pred EEE-cC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCC-----CEEecCCCCchhhhccCCeEEEEcCCCHH
Q 001292 485 VRH-YG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI-----PVITPDFPIIKEYVAEGAQVIFFQKDNPE 556 (1106)
Q Consensus 485 V~f-lG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~-----PVIASD~gGI~EiV~Dg~nG~LV~~~D~e 556 (1106)
|++ .| +.+++..+|++|||+|+||..| |||++++||||||+ |||+|+++|..+.+. +|+++++.|++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv~v~pS~~E--GfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~---~g~lv~p~d~~ 407 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDVGLVTPLRD--GMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRD 407 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCSSB--SCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTCHH
T ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCcc--cCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC---CeEEECCCCHH
Confidence 664 56 4589999999999999999987 99999999999997 999999999988882 79999999999
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 001292 557 GLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENV 605 (1106)
Q Consensus 557 eLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyesl 605 (1106)
++|++|.++++++.. .++++++++++.+.++.+...++.|.+.|+++
T Consensus 408 ~lA~ai~~lL~~~~~--~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 408 EVAAALDRALTMSLA--ERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHHTCCHH--HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCHH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 999999999997542 26788999999999988888888999999876
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.87 E-value=7.6e-22 Score=220.21 Aligned_cols=327 Identities=11% Similarity=-0.007 Sum_probs=207.1
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHC-CCEEEEEEcCCCCc--hHH-------------------------HHHHhH
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKL-GYVFKIYAVRSGNS--HSL-------------------------WEQIAG 274 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~-GyeVtV~t~~dg~~--~~i-------------------------~r~lg~ 274 (1106)
+||+++++... +...+.+++++|++. |++|.+++...... ... ...+..
T Consensus 6 mkIl~v~~~~~---~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (376)
T 1v4v_A 6 KRVVLAFGTRP---EATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQ 82 (376)
T ss_dssp EEEEEEECSHH---HHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHH
T ss_pred eEEEEEEeccH---HHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHHcCCCcccccccCCCCccHHHHHHHHHHH
Confidence 68999987642 234567899999998 89987765532110 000 011123
Q ss_pred HHHHhhccCccEEEEccccH-HHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhcc
Q 001292 275 QISILGQEQYSLIDWSIFDG-IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSR 353 (1106)
Q Consensus 275 lvkiIr~~~pDiIh~~~~~~-i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~ 353 (1106)
+.++++..+||+||++.... .+...+..+. .++|++++ |..... +..+... ....... .....
T Consensus 83 l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~----------~~ip~v~~-~~~~~~-~~~~~~~--~~~~~~~--~~~~~ 146 (376)
T 1v4v_A 83 AARALKEMGADYVLVHGDTLTTFAVAWAAFL----------EGIPVGHV-EAGLRS-GNLKEPF--PEEANRR--LTDVL 146 (376)
T ss_dssp HHHHHHHTTCSEEEEESSCHHHHHHHHHHHH----------TTCCEEEE-TCCCCC-SCTTSST--THHHHHH--HHHHH
T ss_pred HHHHHHHcCCCEEEEeCChHHHHHHHHHHHH----------hCCCEEEE-eCCCcc-ccccCCC--chHHHHH--HHHHH
Confidence 55677778999999986533 2333343332 57998754 442211 1110000 0111111 12345
Q ss_pred ccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHH
Q 001292 354 VNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA 431 (1106)
Q Consensus 354 AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~d 431 (1106)
+|.+++++...... ..+++++++.+++|.++|. ..+.+ ....++.++ .++.++++++||+.. .|+++
T Consensus 147 ~~~~~~~s~~~~~~l~~~g~~~~ki~vi~n~~~d~---~~~~~--~~~~~~~~~--~~~~~vl~~~gr~~~----~k~~~ 215 (376)
T 1v4v_A 147 TDLDFAPTPLAKANLLKEGKREEGILVTGQTGVDA---VLLAA--KLGRLPEGL--PEGPYVTVTMHRREN----WPLLS 215 (376)
T ss_dssp CSEEEESSHHHHHHHHTTTCCGGGEEECCCHHHHH---HHHHH--HHCCCCTTC--CSSCEEEECCCCGGG----GGGHH
T ss_pred hceeeCCCHHHHHHHHHcCCCcceEEEECCchHHH---Hhhhh--hhhHHHHhc--CCCCEEEEEeCcccc----hHHHH
Confidence 88999998765544 3467777899999854553 11110 011122223 245567778887654 56899
Q ss_pred HHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccC
Q 001292 432 VAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSS 509 (1106)
Q Consensus 432 lLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~ 509 (1106)
.+++|++.+.++. |++++++++|.++. ..+.+++++. ..+ +|+|+|+. .++..+|+.||++|+||
T Consensus 216 ~ll~a~~~l~~~~-------~~~~lv~~~g~~~~-~~~~l~~~~~---~~~-~v~~~g~~g~~~~~~~~~~ad~~v~~S- 282 (376)
T 1v4v_A 216 DLAQALKRVAEAF-------PHLTFVYPVHLNPV-VREAVFPVLK---GVR-NFVLLDPLEYGSMAALMRASLLLVTDS- 282 (376)
T ss_dssp HHHHHHHHHHHHC-------TTSEEEEECCSCHH-HHHHHHHHHT---TCT-TEEEECCCCHHHHHHHHHTEEEEEESC-
T ss_pred HHHHHHHHHHhhC-------CCeEEEEECCCCHH-HHHHHHHHhc---cCC-CEEEECCCCHHHHHHHHHhCcEEEECC-
Confidence 9999998876432 67774333476542 1366666553 233 89999532 38999999999999997
Q ss_pred CCCCCCcHHHHHHHHhCCCEEec-CCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH
Q 001292 510 QVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKN 588 (1106)
Q Consensus 510 ~EeEGFGlvLLEAMA~G~PVIAS-D~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake 588 (1106)
+ |+ ++||||||+|||++ +.++..+++.++ +|++++ .|+++|+++|.++++|++. +++|++++..
T Consensus 283 -~----g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv~-~d~~~la~~i~~ll~d~~~---~~~~~~~~~~---- 347 (376)
T 1v4v_A 283 -G----GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAG-TDPEGVYRVVKGLLENPEE---LSRMRKAKNP---- 347 (376)
T ss_dssp -H----HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECC-SCHHHHHHHHHHHHTCHHH---HHHHHHSCCS----
T ss_pred -c----CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEECC-CCHHHHHHHHHHHHhChHh---hhhhcccCCC----
Confidence 3 44 88999999999987 678999988665 898886 5999999999999999987 5777765422
Q ss_pred hcHHHHHHHHHHHHHHHhc
Q 001292 589 MLALDCVTRYARILENVLN 607 (1106)
Q Consensus 589 ~fsee~v~~Y~eLyeslLk 607 (1106)
+.+....+++.++++++++
T Consensus 348 ~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 348 YGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp SCCSCHHHHHHHHHHHHTT
T ss_pred CCCChHHHHHHHHHHHHhc
Confidence 2223455677777777765
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.7e-21 Score=190.00 Aligned_cols=159 Identities=17% Similarity=0.274 Sum_probs=135.5
Q ss_pred cEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCC
Q 001292 411 EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF 490 (1106)
Q Consensus 411 ~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~ 490 (1106)
.++|+++|++.+ .||++.+++|+..+. ..|+++ |+++|.++.. +.++++++++++ +|.+ |+
T Consensus 2 ~~~i~~~G~~~~----~Kg~~~li~a~~~l~--------~~~~~~-l~i~G~g~~~--~~~~~~~~~~~~---~v~~-g~ 62 (166)
T 3qhp_A 2 PFKIAMVGRYSN----EKNQSVLIKAVALSK--------YKQDIV-LLLKGKGPDE--KKIKLLAQKLGV---KAEF-GF 62 (166)
T ss_dssp CEEEEEESCCST----TTTHHHHHHHHHTCT--------TGGGEE-EEEECCSTTH--HHHHHHHHHHTC---EEEC-CC
T ss_pred ceEEEEEeccch----hcCHHHHHHHHHHhc--------cCCCeE-EEEEeCCccH--HHHHHHHHHcCC---eEEE-ee
Confidence 578999999887 899999999997652 126888 6889999875 999999999887 5888 86
Q ss_pred --hhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCC-CEEe-cCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHH
Q 001292 491 --NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI-PVIT-PDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI 566 (1106)
Q Consensus 491 --~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~-PVIA-SD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LL 566 (1106)
.+++..+|+.||++|+||..| +||++++||||+|+ |||+ ++.++..+++.++.+ ++++.|+++++++|.+++
T Consensus 63 ~~~~~~~~~~~~adv~v~ps~~e--~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 63 VNSNELLEILKTCTLYVHAANVE--SEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LFEPNNAKDLSAKIDWWL 138 (166)
T ss_dssp CCHHHHHHHHTTCSEEEECCCSC--CCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EECTTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhCCEEEECCccc--CccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EEcCCCHHHHHHHHHHHH
Confidence 478999999999999999986 99999999999997 9999 578899999977644 788899999999999999
Q ss_pred hCcccHHHHHHHHHHHHHHHHHhcHHHHH
Q 001292 567 SNGKLSKFARTVASAGRLHAKNMLALDCV 595 (1106)
Q Consensus 567 sDpelRk~r~~mGe~Are~ake~fsee~v 595 (1106)
+|++. +.+|++++++.++++.|+.++
T Consensus 139 ~~~~~---~~~~~~~~~~~~~~~s~~~~~ 164 (166)
T 3qhp_A 139 ENKLE---RERMQNEYAKSALNYTLENSV 164 (166)
T ss_dssp HCHHH---HHHHHHHHHHHHHHHC-----
T ss_pred hCHHH---HHHHHHHHHHHHHHCChhhhh
Confidence 99987 688999999999777776554
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=191.31 Aligned_cols=145 Identities=16% Similarity=0.097 Sum_probs=130.3
Q ss_pred cCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHH--HcCCCC
Q 001292 405 NGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVAS--RLGLLE 482 (1106)
Q Consensus 405 lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLae--klGL~d 482 (1106)
+.++.++++|+++|++.. .|+.+.+++|++.+ ++++ |+|+|.++.. +.++++++ .+++.+
T Consensus 17 ~~~~~~~~~i~~~G~~~~----~Kg~~~li~a~~~l-----------~~~~-l~i~G~~~~~--~~l~~~~~~~~~~l~~ 78 (177)
T 2f9f_A 17 FKFKCYGDFWLSVNRIYP----EKRIELQLEVFKKL-----------QDEK-LYIVGWFSKG--DHAERYARKIMKIAPD 78 (177)
T ss_dssp CCCCCCCSCEEEECCSSG----GGTHHHHHHHHHHC-----------TTSC-EEEEBCCCTT--STHHHHHHHHHHHSCT
T ss_pred cccCCCCCEEEEEecccc----ccCHHHHHHHHHhC-----------CCcE-EEEEecCccH--HHHHHHHHhhhcccCC
Confidence 456778889999999887 89999999999655 4566 6889998875 78888888 889987
Q ss_pred CcEEEcCCh--hhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHH
Q 001292 483 HSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSR 560 (1106)
Q Consensus 483 ~rV~flG~~--eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAe 560 (1106)
+|.|.|+. +++..+|+.||++|+||..| +||++++||||||+|||+++.+++.+++.++.+|+++ +.|++++++
T Consensus 79 -~v~~~g~~~~~e~~~~~~~adi~v~ps~~e--~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~~ 154 (177)
T 2f9f_A 79 -NVKFLGSVSEEELIDLYSRCKGLLCTAKDE--DFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NADVNEIID 154 (177)
T ss_dssp -TEEEEESCCHHHHHHHHHHCSEEEECCSSC--CSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHHH
T ss_pred -cEEEeCCCCHHHHHHHHHhCCEEEeCCCcC--CCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHHH
Confidence 99999966 45999999999999999976 9999999999999999999999999999999999999 899999999
Q ss_pred HHHHHHhCccc
Q 001292 561 AFSLFISNGKL 571 (1106)
Q Consensus 561 AI~~LLsDpel 571 (1106)
+|.++++|++.
T Consensus 155 ~i~~l~~~~~~ 165 (177)
T 2f9f_A 155 AMKKVSKNPDK 165 (177)
T ss_dssp HHHHHHHCTTT
T ss_pred HHHHHHhCHHH
Confidence 99999999986
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=6.4e-19 Score=207.73 Aligned_cols=285 Identities=11% Similarity=-0.034 Sum_probs=204.1
Q ss_pred CccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHh-HHHHHHHHhccccEEEecC
Q 001292 283 QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQN-LLSYWKSVFSRVNVIVFPD 361 (1106)
Q Consensus 283 ~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~glek-lis~~~~~l~~AD~VIa~S 361 (1106)
..|+|-+|.|...++..+..+.. .+.++.+..|-.- ...-.+... .. +.......+-.+|.|.+++
T Consensus 149 ~~D~VwVhDYhL~llp~~lR~~~---------~~~~igfFlHiPf-Ps~e~f~~L---p~~~r~ell~gll~~DligF~t 215 (496)
T 3t5t_A 149 ADPVYLVHDYQLVGVPALLREQR---------PDAPILLFVHIPW-PSADYWRIL---PKEIRTGILHGMLPATTIGFFA 215 (496)
T ss_dssp SSCEEEEESGGGTTHHHHHHHHC---------TTSCEEEECCSCC-CCHHHHTTS---CHHHHHHHHHHHTTSSEEEESS
T ss_pred CCCEEEEeCccHhHHHHHHHhhC---------CCCeEEEEEcCCC-CCHHHHhhC---cHhHHHHHHHHHHhCCEEEEec
Confidence 45799999999988887776543 5678898888741 111011111 10 1122234466999999998
Q ss_pred CChhhh-------hc-CCC-------------CCCEEEeCCCCCCcccccccCcchh--HHHHHHHcCCCCCcEEEEEEc
Q 001292 362 YTLPML-------YS-VLD-------------AGNFFVIPGSPADVWAVEAYSKSHE--KYQLRKENGFLKDEIVVVVVG 418 (1106)
Q Consensus 362 ~~~~~~-------~~-gi~-------------~~KI~VIpN~GVDl~~~e~F~ps~s--~~~LR~~lGL~~d~~VIL~VG 418 (1106)
...... .. +.+ ..++.++|+ |||. +.|.+... ...+|++++ ++++|+++|
T Consensus 216 ~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~-GID~---~~f~~~~~~~~~~lr~~~~---~~~lIl~Vg 288 (496)
T 3t5t_A 216 DRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPL-GYSP---LTLDGRNPQLPEGIEEWAD---GHRLVVHSG 288 (496)
T ss_dssp HHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCC-CBCG---GGC----CCCCTTHHHHHT---TSEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEecc-EeCH---HHhchhhHHHHHHHHHHhC---CceEEEEcc
Confidence 655432 11 211 125678886 8998 66655321 256777776 678999999
Q ss_pred ccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEc-----CCCC--ccHHHHHHHHHHcC----CCCCcEEE
Q 001292 419 SSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCG-----NSTD--GYNDALQEVASRLG----LLEHSVRH 487 (1106)
Q Consensus 419 Rl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG-----~Gpe--rY~eeLkeLaeklG----L~d~rV~f 487 (1106)
|+.. .||+..+|+|+ +++++++. -. ++. |+++| ++++ .+..++++++.+++ .. .|+|
T Consensus 289 RLd~----~KGi~~lL~Af-~ll~~~P~---~~-~v~-Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~--~V~f 356 (496)
T 3t5t_A 289 RTDP----IKNAERAVRAF-VLAARGGG---LE-KTR-MLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD--TVRI 356 (496)
T ss_dssp ESSG----GGCHHHHHHHH-HHHHHTSS---CT-TEE-EEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT--SEEE
T ss_pred cCcc----ccCHHHHHHHH-HHHHhCcc---cc-eEE-EEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc--CEEE
Confidence 9998 99999999999 88865411 11 355 45554 2322 12345556665543 22 5889
Q ss_pred cCC--hhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhC---CCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHH
Q 001292 488 YGF--NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFG---IPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAF 562 (1106)
Q Consensus 488 lG~--~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G---~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI 562 (1106)
+|. .+++..+|++|||+++||..| |||++++|||||| .|+|+|+++|..+.+ +.+|++++|.|++++|++|
T Consensus 357 ~g~v~~~el~aly~~ADv~vv~SlrE--GfgLv~~EamA~~~~~g~lVlSe~aGa~~~l--~~~allVnP~D~~~lA~AI 432 (496)
T 3t5t_A 357 DNDNDVNHTIACFRRADLLIFNSTVD--GQNLSTFEAPLVNERDADVILSETCGAAEVL--GEYCRSVNPFDLVEQAEAI 432 (496)
T ss_dssp EECCCHHHHHHHHHHCSEEEECCSSB--SCCSHHHHHHHHCSSCCEEEEETTBTTHHHH--GGGSEEECTTBHHHHHHHH
T ss_pred eCCCCHHHHHHHHHhccEEEECcccc--cCChhHHHHHHhCCCCCCEEEeCCCCCHHHh--CCCEEEECCCCHHHHHHHH
Confidence 884 578999999999999999997 9999999999997 899999999999999 4479999999999999999
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 001292 563 SLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENV 605 (1106)
Q Consensus 563 ~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyesl 605 (1106)
.++++++.. +++++.+++++.+.++.....+..+.+-++..
T Consensus 433 ~~aL~m~~~--er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 433 SAALAAGPR--QRAEAAARRRDAARPWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp HHHHHCCHH--HHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHH--HHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhc
Confidence 999998863 36778889999999988888888877777655
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.6e-18 Score=193.51 Aligned_cols=313 Identities=15% Similarity=0.127 Sum_probs=200.8
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHC-CCEEEEEEcCCCC--chHH-------------------------HHHHhH
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKL-GYVFKIYAVRSGN--SHSL-------------------------WEQIAG 274 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~-GyeVtV~t~~dg~--~~~i-------------------------~r~lg~ 274 (1106)
+||++|+|.- ++-+.+.+++++|++. |+++.++.++... .... .+.+..
T Consensus 26 ~ki~~v~Gtr---~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~ 102 (396)
T 3dzc_A 26 KKVLIVFGTR---PEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLG 102 (396)
T ss_dssp EEEEEEECSH---HHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHH
T ss_pred CeEEEEEecc---HhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeeecCCCCCCHHHHHHHHHHH
Confidence 6899998764 3556778999999997 7888766543221 1111 112223
Q ss_pred HHHHhhccCccEEEEccccHH-HHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhcc
Q 001292 275 QISILGQEQYSLIDWSIFDGI-IADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSR 353 (1106)
Q Consensus 275 lvkiIr~~~pDiIh~~~~~~i-~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~ 353 (1106)
+.++++..+||+++.+..... +...+..+ ..+||++.. + .++..+..+.+.. ...... ..-+.
T Consensus 103 l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~----------~~~IPv~h~-~-ag~rs~~~~~~~~--~~~~r~--~~~~~ 166 (396)
T 3dzc_A 103 MQQVLSSEQPDVVLVHGDTATTFAASLAAY----------YQQIPVGHV-E-AGLRTGNIYSPWP--EEGNRK--LTAAL 166 (396)
T ss_dssp HHHHHHHHCCSEEEEETTSHHHHHHHHHHH----------TTTCCEEEE-T-CCCCCSCTTSSTT--HHHHHH--HHHHT
T ss_pred HHHHHHhcCCCEEEEECCchhHHHHHHHHH----------HhCCCEEEE-E-CCccccccccCCc--HHHHHH--HHHHh
Confidence 677788899999999764443 44344443 378998754 3 2221111110110 111111 11246
Q ss_pred ccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcch--h----HHHHHHHcC-CCCCcEEEEEEc-ccCcc
Q 001292 354 VNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSH--E----KYQLRKENG-FLKDEIVVVVVG-SSFFY 423 (1106)
Q Consensus 354 AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~--s----~~~LR~~lG-L~~d~~VIL~VG-Rl~~y 423 (1106)
+|.+++++...... ..+++++++.+++|.++|. ..+.+.. . ...+++++| ++++.+++++.| |...
T Consensus 167 a~~~~~~se~~~~~l~~~G~~~~ki~vvGn~~~d~---~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~- 242 (396)
T 3dzc_A 167 TQYHFAPTDTSRANLLQENYNAENIFVTGNTVIDA---LLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRES- 242 (396)
T ss_dssp CSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHH---HHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCC-
T ss_pred cCEEECCCHHHHHHHHHcCCCcCcEEEECCcHHHH---HHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCccc-
Confidence 88999998765444 4578888999999866664 1221111 1 266788899 455555555444 4222
Q ss_pred ccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHc
Q 001292 424 NELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMA 501 (1106)
Q Consensus 424 ~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaA 501 (1106)
..|+++.+++|++.+.+++ |++++++.+|.++. ..+.++++ ++..+ +|+++++. .++..+|+.|
T Consensus 243 --~~~~~~~ll~A~~~l~~~~-------~~~~~v~~~g~~~~-~~~~l~~~---~~~~~-~v~~~~~lg~~~~~~l~~~a 308 (396)
T 3dzc_A 243 --FGGGFERICQALITTAEQH-------PECQILYPVHLNPN-VREPVNKL---LKGVS-NIVLIEPQQYLPFVYLMDRA 308 (396)
T ss_dssp --CTTHHHHHHHHHHHHHHHC-------TTEEEEEECCBCHH-HHHHHHHH---TTTCT-TEEEECCCCHHHHHHHHHHC
T ss_pred --chhHHHHHHHHHHHHHHhC-------CCceEEEEeCCChH-HHHHHHHH---HcCCC-CEEEeCCCCHHHHHHHHHhc
Confidence 1256788999998776432 77775443465432 12333332 34444 89998866 5888999999
Q ss_pred CeEEEccCCCCCCCcHHHHHHHHhCCCEEec-CCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHH
Q 001292 502 DIVLYGSSQVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVAS 580 (1106)
Q Consensus 502 DVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS-D~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe 580 (1106)
|++|.+| | |.. +|||++|+|||++ +.++..|.+.+| ++++++ .|+++|+++|..+++|++. +++|++
T Consensus 309 d~vv~~S-----G-g~~-~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv~-~d~~~l~~ai~~ll~d~~~---~~~m~~ 376 (396)
T 3dzc_A 309 HIILTDS-----G-GIQ-EEAPSLGKPVLVMRETTERPEAVAAG-TVKLVG-TNQQQICDALSLLLTDPQA---YQAMSQ 376 (396)
T ss_dssp SEEEESC-----S-GGG-TTGGGGTCCEEECCSSCSCHHHHHHT-SEEECT-TCHHHHHHHHHHHHHCHHH---HHHHHT
T ss_pred CEEEECC-----c-cHH-HHHHHcCCCEEEccCCCcchHHHHcC-ceEEcC-CCHHHHHHHHHHHHcCHHH---HHHHhh
Confidence 9999886 2 333 8999999999998 788888998887 567776 4899999999999999987 577777
Q ss_pred HHHH
Q 001292 581 AGRL 584 (1106)
Q Consensus 581 ~Are 584 (1106)
++..
T Consensus 377 ~~~~ 380 (396)
T 3dzc_A 377 AHNP 380 (396)
T ss_dssp SCCT
T ss_pred ccCC
Confidence 6543
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.7e-17 Score=189.10 Aligned_cols=331 Identities=13% Similarity=0.060 Sum_probs=205.4
Q ss_pred CCEEEEEeCCCCCChhHHHHHHHHHHHHHC--CCEEEEEEcCCC--Cc-------------------------hHHHHHH
Q 001292 222 PPRIGLILGNMAKDSRSLLLITVVKNLQKL--GYVFKIYAVRSG--NS-------------------------HSLWEQI 272 (1106)
Q Consensus 222 ~~RIalVlg~L~~gGesl~vv~LakaLqe~--GyeVtV~t~~dg--~~-------------------------~~i~r~l 272 (1106)
++||++|+|.- ++-+.+.+++++|++. |+++.++.++.. .. ....+.+
T Consensus 27 ~~kI~~v~Gtr---~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~i~~~~~l~v~~~~~~~~~~~~~~~ 103 (403)
T 3ot5_A 27 KIKVMSIFGTR---PEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFDIKPDIDLDIMKKGQTLAEITSRVM 103 (403)
T ss_dssp CEEEEEEECSH---HHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTTCCCSEECCCCC-CCCHHHHHHHHH
T ss_pred cceEEEEEecC---hhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcCCCCCcccccCCCCCCHHHHHHHHH
Confidence 46899998763 3456668999999998 688776644321 00 1112222
Q ss_pred hHHHHHhhccCccEEEEcccc-HHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHh
Q 001292 273 AGQISILGQEQYSLIDWSIFD-GIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVF 351 (1106)
Q Consensus 273 g~lvkiIr~~~pDiIh~~~~~-~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l 351 (1106)
..+.++++..+||+++++... ..+...+..+. .+||++.. +. ++..+-.+.+.. ......+ .-
T Consensus 104 ~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~----------~~IPv~h~-~a-glrs~~~~~~~p--~~~~r~~--~~ 167 (403)
T 3ot5_A 104 NGINEVIAAENPDIVLVHGDTTTSFAAGLATFY----------QQKMLGHV-EA-GLRTWNKYSPFP--EEMNRQL--TG 167 (403)
T ss_dssp HHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHH----------TTCEEEEE-SC-CCCCSCTTSSTT--HHHHHHH--HH
T ss_pred HHHHHHHHHcCCCEEEEECCchhHHHHHHHHHH----------hCCCEEEE-EC-CccccccccCCc--HHHHHHH--HH
Confidence 336778888999999997653 33333444432 68998654 32 221111110110 1111111 12
Q ss_pred ccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcch-hHHHHHHHcCCCCCcEEEEEEcccCccccccC
Q 001292 352 SRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSH-EKYQLRKENGFLKDEIVVVVVGSSFFYNELSW 428 (1106)
Q Consensus 352 ~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~-s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~K 428 (1106)
..+|.+++++...... ..|++++++.+++|.++|. ..+.+.. .....++++ +++..+++.+||... ..+
T Consensus 168 ~~a~~~~~~se~~~~~l~~~Gi~~~~i~vvGn~~~D~---~~~~~~~~~~~~~~~~l--~~~~~vlv~~~r~~~---~~~ 239 (403)
T 3ot5_A 168 VMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDA---LKTTVQKDYHHPILENL--GDNRLILMTAHRREN---LGE 239 (403)
T ss_dssp HHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHH---HHHHSCTTCCCHHHHSC--TTCEEEEECCCCHHH---HTT
T ss_pred HhcCEEECCCHHHHHHHHHcCCCcccEEEeCCchHHH---HHhhhhhhcchHHHHhc--cCCCEEEEEeCcccc---cCc
Confidence 3478889988766544 5688888999999877775 2222211 112344454 334444455554321 124
Q ss_pred CHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHH-cCCCCCcEEEcCChh--hHHHHHHHcCeEE
Q 001292 429 DYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASR-LGLLEHSVRHYGFNG--DVNGVLLMADIVL 505 (1106)
Q Consensus 429 g~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaek-lGL~d~rV~flG~~e--DL~~LyaaADVfV 505 (1106)
+...+++|+..+.+++ |++++++.+|.++ .+++.+++ ++..+ +|+++|+.+ ++..+|+.||++|
T Consensus 240 ~l~~ll~a~~~l~~~~-------~~~~~v~~~~~~~-----~~~~~l~~~~~~~~-~v~l~~~l~~~~~~~l~~~ad~vv 306 (403)
T 3ot5_A 240 PMQGMFEAVREIVESR-------EDTELVYPMHLNP-----AVREKAMAILGGHE-RIHLIEPLDAIDFHNFLRKSYLVF 306 (403)
T ss_dssp HHHHHHHHHHHHHHHC-------TTEEEEEECCSCH-----HHHHHHHHHHTTCT-TEEEECCCCHHHHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHhC-------CCceEEEecCCCH-----HHHHHHHHHhCCCC-CEEEeCCCCHHHHHHHHHhcCEEE
Confidence 5788999998776433 7777433334433 23333333 34444 899999774 8999999999998
Q ss_pred EccCCCCCCCcHHHHHHHHhCCCEEec-CCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Q 001292 506 YGSSQVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRL 584 (1106)
Q Consensus 506 ~PS~~EeEGFGlvLLEAMA~G~PVIAS-D~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are 584 (1106)
.+| |...+|||++|+|||+. +.++..|.+..| +|++++. |+++|+++|..+++|++. +++|++++..
T Consensus 307 ~~S-------Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv~~-d~~~l~~ai~~ll~~~~~---~~~m~~~~~~ 374 (403)
T 3ot5_A 307 TDS-------GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLIGT-NKENLIKEALDLLDNKES---HDKMAQAANP 374 (403)
T ss_dssp ECC-------HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEECCS-CHHHHHHHHHHHHHCHHH---HHHHHHSCCT
T ss_pred ECC-------ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEcCC-CHHHHHHHHHHHHcCHHH---HHHHHhhcCc
Confidence 776 23339999999999998 788888888766 8888875 999999999999999987 5677765443
Q ss_pred HHHHhcHHHHHHHHHHHHHHHhcC
Q 001292 585 HAKNMLALDCVTRYARILENVLNF 608 (1106)
Q Consensus 585 ~ake~fsee~v~~Y~eLyeslLk~ 608 (1106)
+. .....++..+++.+.+..
T Consensus 375 ~g----~~~aa~rI~~~l~~~l~~ 394 (403)
T 3ot5_A 375 YG----DGFAANRILAAIKSHFEE 394 (403)
T ss_dssp TC----CSCHHHHHHHHHHHHHTC
T ss_pred cc----CCcHHHHHHHHHHHHhCC
Confidence 32 233444556666666653
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=8.1e-17 Score=181.49 Aligned_cols=326 Identities=13% Similarity=0.026 Sum_probs=198.7
Q ss_pred CCCCCCCCCCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCC--------C----ch---------------
Q 001292 214 STPRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSG--------N----SH--------------- 266 (1106)
Q Consensus 214 Sv~r~g~r~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg--------~----~~--------------- 266 (1106)
|......+++||+++.+. .+|....+++++++|+++||+|++++...- - ..
T Consensus 12 ~~~~~~~~~MrIl~~~~~--~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (412)
T 3otg_A 12 SSGHIEGRHMRVLFASLG--THGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLGFEPVATGMPVFDGFLAALRIRF 89 (412)
T ss_dssp ------CCSCEEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCCHHHHHHHHHHHHH
T ss_pred ccCCcccceeEEEEEcCC--CcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhcCCceeecCcccccchhhhhhhhh
Confidence 344456678899999855 456667788999999999999999986321 0 00
Q ss_pred ------------------HHHHH------HhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEE
Q 001292 267 ------------------SLWEQ------IAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWI 322 (1106)
Q Consensus 267 ------------------~i~r~------lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~t 322 (1106)
..+.. ...+.++++..+||+|+.+..... ..+..+. .++|+|.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~--~~~aa~~----------~giP~v~~ 157 (412)
T 3otg_A 90 DTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYG--AGLAALK----------AGIPTICH 157 (412)
T ss_dssp SCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHH--HHHHHHH----------HTCCEEEE
T ss_pred cccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhH--HHHHHHH----------cCCCEEEe
Confidence 00011 123566777789999887643322 2333322 57899998
Q ss_pred EcCCcccccchhhhhhhHHhHHHHHHHH----------hccccEEEecCCChhhhhc-CCCCCCEEEeCCCCCCcccccc
Q 001292 323 IQEDSLANRLPVYVERGFQNLLSYWKSV----------FSRVNVIVFPDYTLPMLYS-VLDAGNFFVIPGSPADVWAVEA 391 (1106)
Q Consensus 323 IHna~Ls~r~~~Y~~~gleklis~~~~~----------l~~AD~VIa~S~~~~~~~~-gi~~~KI~VIpN~GVDl~~~e~ 391 (1106)
.|+....... ...+.+.+..+... ...+|.+++.+........ .+......+.+. +.+.
T Consensus 158 ~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----- 227 (412)
T 3otg_A 158 GVGRDTPDDL----TRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPV-PFAE----- 227 (412)
T ss_dssp CCSCCCCSHH----HHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECCCC-CCCC-----
T ss_pred cccccCchhh----hHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCCcceeecc-CCCC-----
Confidence 7774321111 11112222222221 2356667776654332211 111111111111 1110
Q ss_pred cCcchhHHHHHHHc--C-CCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccH
Q 001292 392 YSKSHEKYQLRKEN--G-FLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYN 468 (1106)
Q Consensus 392 F~ps~s~~~LR~~l--G-L~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~ 468 (1106)
.. . +..+ . .+++..+++++|++. .++...+..+++.+.+ .++++++++|.++..
T Consensus 228 ---~~---~-~~~~~~~~~~~~~~vlv~~G~~~-----~~~~~~~~~~~~~l~~---------~~~~~~~~~g~~~~~-- 284 (412)
T 3otg_A 228 ---QG---D-LPAWLSSRDTARPLVYLTLGTSS-----GGTVEVLRAAIDGLAG---------LDADVLVASGPSLDV-- 284 (412)
T ss_dssp ---CC---C-CCGGGGGSCTTSCEEEEECTTTT-----CSCHHHHHHHHHHHHT---------SSSEEEEECCSSCCC--
T ss_pred ---CC---C-CCCccccccCCCCEEEEEcCCCC-----cCcHHHHHHHHHHHHc---------CCCEEEEEECCCCCh--
Confidence 00 0 1122 1 233455667777653 3455555555544321 234666667766533
Q ss_pred HHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCC----CchhhhccC
Q 001292 469 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEG 544 (1106)
Q Consensus 469 eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~g----GI~EiV~Dg 544 (1106)
+.++ .+.+ +|.+.|+. ++..+|+.||++|.+| ++.+++|||++|+|+|+...+ ++.+.+.+.
T Consensus 285 ~~l~------~~~~-~v~~~~~~-~~~~~l~~ad~~v~~~------g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~ 350 (412)
T 3otg_A 285 SGLG------EVPA-NVRLESWV-PQAALLPHVDLVVHHG------GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA 350 (412)
T ss_dssp TTCC------CCCT-TEEEESCC-CHHHHGGGCSEEEESC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH
T ss_pred hhhc------cCCC-cEEEeCCC-CHHHHHhcCcEEEECC------chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc
Confidence 2222 3455 89999998 8999999999999663 458999999999999996554 477888888
Q ss_pred CeEEEEcCC--CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHH
Q 001292 545 AQVIFFQKD--NPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILE 603 (1106)
Q Consensus 545 ~nG~LV~~~--D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLye 603 (1106)
.+|++++++ |+++|+++|.++++|+++ +++|++.+++......+...++.+++++.
T Consensus 351 g~g~~~~~~~~~~~~l~~ai~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 351 GAGDHLLPDNISPDSVSGAAKRLLAEESY---RAGARAVAAEIAAMPGPDEVVRLLPGFAS 408 (412)
T ss_dssp TSEEECCGGGCCHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHSCCHHHHHTTHHHHHC
T ss_pred CCEEecCcccCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHhcCCCHHHHHHHHHHHhc
Confidence 899999876 899999999999999987 68899999999888777777777777664
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.9e-15 Score=167.06 Aligned_cols=313 Identities=12% Similarity=0.090 Sum_probs=193.8
Q ss_pred CCCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCch----------------------------HHHH--
Q 001292 221 RPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH----------------------------SLWE-- 270 (1106)
Q Consensus 221 r~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~----------------------------~i~r-- 270 (1106)
|++||++..| +.+|-....+.++++|+++|++|.+++...+.-. ..++
T Consensus 1 M~~~i~i~~G--GTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~ 78 (365)
T 3s2u_A 1 MKGNVLIMAG--GTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELL 78 (365)
T ss_dssp --CEEEEECC--SSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHH
T ss_pred CCCcEEEEcC--CCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHH
Confidence 4678887755 2446566788999999999999999875443100 0111
Q ss_pred -HHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHH
Q 001292 271 -QIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKS 349 (1106)
Q Consensus 271 -~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~ 349 (1106)
.+....++++..+||+|........+...++.+. .++|+|++-+|.... .. .++
T Consensus 79 ~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~----------~~iP~vihe~n~~~G------~~---nr~------ 133 (365)
T 3s2u_A 79 KSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARL----------NGVPLVIHEQNAVAG------TA---NRS------ 133 (365)
T ss_dssp HHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHH----------TTCCEEEEECSSSCC------HH---HHH------
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHH----------cCCCEEEEecchhhh------hH---HHh------
Confidence 1112456788899999988655555555555543 689999664443110 00 111
Q ss_pred HhccccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEc-ccCccccccC
Q 001292 350 VFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVG-SSFFYNELSW 428 (1106)
Q Consensus 350 ~l~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VG-Rl~~y~kg~K 428 (1106)
..+.++.|+...... .....++.++++ ++.. +.+... +...++.+++++++.+| ++.. .+
T Consensus 134 l~~~a~~v~~~~~~~-----~~~~~k~~~~g~-pvr~---~~~~~~------~~~~~~~~~~~~ilv~gGs~g~----~~ 194 (365)
T 3s2u_A 134 LAPIARRVCEAFPDT-----FPASDKRLTTGN-PVRG---ELFLDA------HARAPLTGRRVNLLVLGGSLGA----EP 194 (365)
T ss_dssp HGGGCSEEEESSTTS-----SCC---CEECCC-CCCG---GGCCCT------TSSCCCTTSCCEEEECCTTTTC----SH
T ss_pred hccccceeeeccccc-----ccCcCcEEEECC-CCch---hhccch------hhhcccCCCCcEEEEECCcCCc----cc
Confidence 124566666543321 123345666665 5654 222221 22445666666666664 3332 23
Q ss_pred CHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEcc
Q 001292 429 DYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGS 508 (1106)
Q Consensus 429 g~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS 508 (1106)
..+.+++++..+. . ..++.+++++|.+. .+.+.+..++.+. ++.+.++.+++.++|+.||++|.-
T Consensus 195 ~~~~~~~al~~l~-------~-~~~~~vi~~~G~~~---~~~~~~~~~~~~~---~~~v~~f~~dm~~~l~~aDlvI~r- 259 (365)
T 3s2u_A 195 LNKLLPEALAQVP-------L-EIRPAIRHQAGRQH---AEITAERYRTVAV---EADVAPFISDMAAAYAWADLVICR- 259 (365)
T ss_dssp HHHHHHHHHHTSC-------T-TTCCEEEEECCTTT---HHHHHHHHHHTTC---CCEEESCCSCHHHHHHHCSEEEEC-
T ss_pred cchhhHHHHHhcc-------c-ccceEEEEecCccc---cccccceeccccc---ccccccchhhhhhhhccceEEEec-
Confidence 3455566664432 1 13445455566553 4666666666654 577889999999999999999953
Q ss_pred CCCCCCCcHHHHHHHHhCCCEEecCCCCc--------hhhhccCCeEEEEcCC--CHHHHHHHHHHHHhCcccHHHHHHH
Q 001292 509 SQVEQGFPSLIVRAMTFGIPVITPDFPII--------KEYVAEGAQVIFFQKD--NPEGLSRAFSLFISNGKLSKFARTV 578 (1106)
Q Consensus 509 ~~EeEGFGlvLLEAMA~G~PVIASD~gGI--------~EiV~Dg~nG~LV~~~--D~eeLAeAI~~LLsDpelRk~r~~m 578 (1106)
+++.++.|+|++|+|+|..+.+.. .+.+.+...|.+++.. ++++|+++|.++++||+. +++|
T Consensus 260 -----aG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~---~~~m 331 (365)
T 3s2u_A 260 -----AGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPET---LRSM 331 (365)
T ss_dssp -----CCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHH---HHHH
T ss_pred -----CCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHH---HHHH
Confidence 347999999999999998766532 3456666688888654 589999999999999997 6899
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHH
Q 001292 579 ASAGRLHAKNMLALDCVTRYARIL 602 (1106)
Q Consensus 579 Ge~Are~ake~fsee~v~~Y~eLy 602 (1106)
++++++....+-.++.++..+++.
T Consensus 332 ~~~a~~~~~~~aa~~ia~~i~~la 355 (365)
T 3s2u_A 332 ADQARSLAKPEATRTVVDACLEVA 355 (365)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHHC
T ss_pred HHHHHhcCCccHHHHHHHHHHHHH
Confidence 999998776554444444444443
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-14 Score=164.36 Aligned_cols=288 Identities=11% Similarity=-0.035 Sum_probs=185.1
Q ss_pred eCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCC---CchHHHHHHhHHHHHhh-ccCccEEEEcccc--HH-HHHHHH
Q 001292 229 LGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSG---NSHSLWEQIAGQISILG-QEQYSLIDWSIFD--GI-IADSLE 301 (1106)
Q Consensus 229 lg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg---~~~~i~r~lg~lvkiIr-~~~pDiIh~~~~~--~i-~v~~La 301 (1106)
.+.-..++...+-.+..+.+++.|++-..+...+. ......+.+. .++. ..+.|+|.+..+. .. +...+.
T Consensus 19 ~~~~~~~a~~ka~~dv~~i~~~~G~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~DvIi~q~P~~~~~~~~~~~~ 95 (339)
T 3rhz_A 19 NGQSIQSTAQLCQNTVTDVAVSLGYRELGIYCYQIHTDSESELSKRLD---GIVAGLRHGDVVIFQTPTWNTTEFDEKLM 95 (339)
T ss_dssp ESSCTTCHHHHHHHHHHHHHHHTTCEEEEEECCCGGGSCHHHHHHHHH---HHTTTCCTTCEEEEEECCSSCHHHHHHHH
T ss_pred cCccccchHHHHHHHHHHHHHHCCCeEEEeeccccccccHHHHHHHHH---HHHhcCCCCCEEEEeCCCcchhhHHHHHH
Confidence 33334467788888899999999998655543321 1222222222 2222 3567777664433 22 333344
Q ss_pred HHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhh--hcCCCCCCEEEe
Q 001292 302 AKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML--YSVLDAGNFFVI 379 (1106)
Q Consensus 302 ~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~--~~gi~~~KI~VI 379 (1106)
.+.. ..++|+|+.+|+.... +... . ..........++.+|.|+++|....+. ..+++..++.++
T Consensus 96 ~~lk--------~~~~k~i~~ihDl~pl-~~~~--~---~~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~~G~~~~ki~~~ 161 (339)
T 3rhz_A 96 NKLK--------LYDIKIVLFIHDVVPL-MFSG--N---FYLMDRTIAYYNKADVVVAPSQKMIDKLRDFGMNVSKTVVQ 161 (339)
T ss_dssp HHHT--------TSSCEEEEEESCCHHH-HCGG--G---GGGHHHHHHHHTTCSEEEESCHHHHHHHHHTTCCCSEEEEC
T ss_pred HHHH--------hcCCEEEEEecccHHh-hCcc--c---hhhHHHHHHHHHHCCEEEECCHHHHHHHHHcCCCcCceeec
Confidence 4332 2589999999995211 0000 0 111112345689999999999776655 457766677665
Q ss_pred CCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEE
Q 001292 380 PGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFL 459 (1106)
Q Consensus 380 pN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLII 459 (1106)
++ +|.. ... + ...+.+.++|+|+|++.. .+.+..+ .++++ |+|
T Consensus 162 ~~--~~~~--~~~-~----------~~~~~~~~~i~yaG~l~k-----------~~~L~~l----------~~~~~-f~i 204 (339)
T 3rhz_A 162 GM--WDHP--TQA-P----------MFPAGLKREIHFPGNPER-----------FSFVKEW----------KYDIP-LKV 204 (339)
T ss_dssp CS--CCCC--CCC-C----------CCCCEEEEEEEECSCTTT-----------CGGGGGC----------CCSSC-EEE
T ss_pred CC--CCcc--Ccc-c----------ccccCCCcEEEEeCCcch-----------hhHHHhC----------CCCCe-EEE
Confidence 54 2320 011 0 112345689999998753 0111111 26787 688
Q ss_pred EcCCCCccHHHHHHHHHHcCCCCCcEEEcC--ChhhHHHHHHHcCeEEEccCC-C----CCCCcHHHHHHHHhCCCEEec
Q 001292 460 CGNSTDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQ-V----EQGFPSLIVRAMTFGIPVITP 532 (1106)
Q Consensus 460 VG~GperY~eeLkeLaeklGL~d~rV~flG--~~eDL~~LyaaADVfV~PS~~-E----eEGFGlvLLEAMA~G~PVIAS 532 (1106)
+|+|++. .++ +|+|+| +.+++..+|+.+|+.++.... . ....|++++|+||+|+|||++
T Consensus 205 vG~G~~~------------~l~--nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~ 270 (339)
T 3rhz_A 205 YTWQNVE------------LPQ--NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQ 270 (339)
T ss_dssp EESCCCC------------CCT--TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEE
T ss_pred EeCCccc------------CcC--CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEc
Confidence 9999964 243 799999 458899999989988876110 0 014699999999999999999
Q ss_pred CCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcH
Q 001292 533 DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA 591 (1106)
Q Consensus 533 D~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fs 591 (1106)
+.+++.++|.++.+|++++ +.++++++|..+. ++. +++|++++++.+++..+
T Consensus 271 ~~~~~~~~v~~~~~G~~~~--~~~e~~~~i~~l~--~~~---~~~m~~na~~~a~~~~~ 322 (339)
T 3rhz_A 271 EGIANQELIENNGLGWIVK--DVEEAIMKVKNVN--EDE---YIELVKNVRSFNPILRK 322 (339)
T ss_dssp TTCTTTHHHHHHTCEEEES--SHHHHHHHHHHCC--HHH---HHHHHHHHHHHTHHHHT
T ss_pred cChhHHHHHHhCCeEEEeC--CHHHHHHHHHHhC--HHH---HHHHHHHHHHHHHHhhc
Confidence 9999999999999999986 6899999999874 222 58899999888665443
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-14 Score=165.49 Aligned_cols=321 Identities=12% Similarity=0.045 Sum_probs=186.7
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCC----------------C----c----------hHHH---
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSG----------------N----S----------HSLW--- 269 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg----------------~----~----------~~i~--- 269 (1106)
++|+++.. ...|....++.++++|+++||+|++++.... . . ...+
T Consensus 8 ~kIl~~~~--~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (430)
T 2iyf_A 8 AHIAMFSI--AAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGPRPVLYHSTLPGPDADPEAWGSTLLDNVEPF 85 (430)
T ss_dssp CEEEEECC--SCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTTSCEEEECCCCSCCTTSCGGGGCSSHHHHHHHH
T ss_pred ceEEEEeC--CCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEEcCCcCccccccccccchhhHHHHHHH
Confidence 58988743 4466677789999999999999999985321 0 0 0001
Q ss_pred -----HHHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhh-------
Q 001292 270 -----EQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVE------- 337 (1106)
Q Consensus 270 -----r~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~------- 337 (1106)
.....+.++++..++|+|+...+.. ...+..+. .++|+|+..+.............
T Consensus 86 ~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~--~~~~~A~~----------~giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 153 (430)
T 2iyf_A 86 LNDAIQALPQLADAYADDIPDLVLHDITSY--PARVLARR----------WGVPAVSLSPNLVAWKGYEEEVAEPMWREP 153 (430)
T ss_dssp HHHHHHHHHHHHHHHTTSCCSEEEEETTCH--HHHHHHHH----------HTCCEEEEESSCCCCTTHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccCCCEEEECCccH--HHHHHHHH----------cCCCEEEEecccccccccccccccchhhhh
Confidence 1122256677778999998765432 22222221 47899988766421111000000
Q ss_pred ---hhHH---hHHHHHHH----------HhccccEEEecCCChhhhh-cCCCCCCEEEeCCCCCCcccccccCcchhHHH
Q 001292 338 ---RGFQ---NLLSYWKS----------VFSRVNVIVFPDYTLPMLY-SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQ 400 (1106)
Q Consensus 338 ---~gle---klis~~~~----------~l~~AD~VIa~S~~~~~~~-~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~ 400 (1106)
.+.. ..+..+.. .+..++.+++.+....... ..++..++.++++ +++. ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~vG~-~~~~---~~~-------- 221 (430)
T 2iyf_A 154 RQTERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRVDEDVYTFVGA-CQGD---RAE-------- 221 (430)
T ss_dssp HHSHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGSCTTTEEECCC-CC----------------
T ss_pred ccchHHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccCCCccEEEeCC-cCCC---CCC--------
Confidence 0110 01111111 1124666776654432221 2333322777764 2332 000
Q ss_pred HHHHcC--CCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHc
Q 001292 401 LRKENG--FLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRL 478 (1106)
Q Consensus 401 LR~~lG--L~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaekl 478 (1106)
...+. .+++.++++++|++.. +..+....++++++ .. +++++++++|.++.. +.++
T Consensus 222 -~~~~~~~~~~~~~v~v~~Gs~~~--~~~~~~~~~~~~l~-------~~----~~~~~~~~~G~~~~~--~~l~------ 279 (430)
T 2iyf_A 222 -EGGWQRPAGAEKVVLVSLGSAFT--KQPAFYRECVRAFG-------NL----PGWHLVLQIGRKVTP--AELG------ 279 (430)
T ss_dssp -CCCCCCCTTCSEEEEEECTTTCC---CHHHHHHHHHHHT-------TC----TTEEEEEECC---CG--GGGC------
T ss_pred -CCCCccccCCCCeEEEEcCCCCC--CcHHHHHHHHHHHh-------cC----CCeEEEEEeCCCCCh--HHhc------
Confidence 00122 1234567888887651 22222233333331 11 456766788987754 3331
Q ss_pred CCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCC----chhhhccCCeEEEEcCC-
Q 001292 479 GLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVAEGAQVIFFQKD- 553 (1106)
Q Consensus 479 GL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gG----I~EiV~Dg~nG~LV~~~- 553 (1106)
.+++ +|.+.|+..+. .+|+.||++|..+ .+++++|||++|+|+|+.+.++ +.+.+.+...|++++.+
T Consensus 280 ~~~~-~v~~~~~~~~~-~~l~~ad~~v~~~------G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~ 351 (430)
T 2iyf_A 280 ELPD-NVEVHDWVPQL-AILRQADLFVTHA------GAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEE 351 (430)
T ss_dssp SCCT-TEEEESSCCHH-HHHTTCSEEEECC------CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-
T ss_pred cCCC-CeEEEecCCHH-HHhhccCEEEECC------CccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCC
Confidence 2455 89999988777 8999999998753 3589999999999999997754 46667777789998876
Q ss_pred -CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 001292 554 -NPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 602 (1106)
Q Consensus 554 -D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLy 602 (1106)
|+++|+++|.++++|+++ ++++++.+++......+.+.++.+++++
T Consensus 352 ~~~~~l~~~i~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 398 (430)
T 2iyf_A 352 ATADLLRETALALVDDPEV---ARRLRRIQAEMAQEGGTRRAADLIEAEL 398 (430)
T ss_dssp CCHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHCHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHhcCcHHHHHHHHHHHh
Confidence 899999999999999987 5778888887776554444444554444
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=4.8e-15 Score=167.32 Aligned_cols=318 Identities=11% Similarity=0.027 Sum_probs=174.3
Q ss_pred CCCCCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCC------------ch--------------------
Q 001292 219 GVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN------------SH-------------------- 266 (1106)
Q Consensus 219 g~r~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~------------~~-------------------- 266 (1106)
....+||+++... ..|....+.+++++|+++||+|+|++..... ..
T Consensus 12 ~~~~MrIl~~~~~--~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 4fzr_A 12 RGSHMRILVIAGC--SEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAGLPFAPTCPSLDMPEVLSWDREGNRTTM 89 (398)
T ss_dssp ---CCEEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTTCCEEEEESSCCHHHHHSBCTTSCBCCC
T ss_pred CCCceEEEEEcCC--CcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCCCeeEecCCccchHhhhhhhccCccccc
Confidence 4556899998754 4566667889999999999999999863210 00
Q ss_pred ---------HH---H-----HHHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccc
Q 001292 267 ---------SL---W-----EQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLA 329 (1106)
Q Consensus 267 ---------~i---~-----r~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls 329 (1106)
.. + ..+..+..+++..+||+|+..... +...+..+. .++|+|.+.|+....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~--~~~~~~a~~----------~giP~v~~~~~~~~~ 157 (398)
T 4fzr_A 90 PREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYS--LTGPLVAAT----------LGIPWIEQSIRLASP 157 (398)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTC--THHHHHHHH----------HTCCEEEECCSSCCC
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccc--cHHHHHHHh----------hCCCEEEeccCCCCc
Confidence 00 0 011125667777899999875422 223333322 478999887774322
Q ss_pred ccchhhhhhhHHhHHHHHHHHh-----ccccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHH
Q 001292 330 NRLPVYVERGFQNLLSYWKSVF-----SRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKE 404 (1106)
Q Consensus 330 ~r~~~Y~~~gleklis~~~~~l-----~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~ 404 (1106)
..... ...+.+..+...+ ...+..+.................+..++... . .......+.
T Consensus 158 ~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~-- 222 (398)
T 4fzr_A 158 ELIKS----AGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQPKPGTTKMRYVPYNG-R--------NDQVPSWVF-- 222 (398)
T ss_dssp HHHHH----HHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC----CCCEECCCCCCCC-S--------SCCCCHHHH--
T ss_pred hhhhH----HHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCCCCCCCCeeeeCCCC-C--------CCCCchhhh--
Confidence 11110 1111111111111 11233343332221111000000011111100 0 000011111
Q ss_pred cCCCCCcEEEEEEcccCcccc------ccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHc
Q 001292 405 NGFLKDEIVVVVVGSSFFYNE------LSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRL 478 (1106)
Q Consensus 405 lGL~~d~~VIL~VGRl~~y~k------g~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaekl 478 (1106)
..+++..+++++|++...+. +.+....+++++..+ +++ +++++.+... +.+.
T Consensus 223 -~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~------------~~~-~v~~~~~~~~--~~l~------ 280 (398)
T 4fzr_A 223 -EERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL------------GFE-VVVAVSDKLA--QTLQ------ 280 (398)
T ss_dssp -SCCSSCEEECC----------------CCSHHHHHHHGGGG------------TCE-EEECCCC---------------
T ss_pred -cCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC------------CCE-EEEEeCCcch--hhhc------
Confidence 11345667788888764221 344566666666322 345 3555554432 3332
Q ss_pred CCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEe----cCCCCchhhhccCCeEEEEcCC-
Q 001292 479 GLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVIT----PDFPIIKEYVAEGAQVIFFQKD- 553 (1106)
Q Consensus 479 GL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIA----SD~gGI~EiV~Dg~nG~LV~~~- 553 (1106)
.+.+ +|.+.|+. ++..+|..||++|.. +++.+++|||++|+|+|+ ++..++.+.+.+...|++++..
T Consensus 281 ~~~~-~v~~~~~~-~~~~ll~~ad~~v~~------gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~ 352 (398)
T 4fzr_A 281 PLPE-GVLAAGQF-PLSAIMPACDVVVHH------GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQ 352 (398)
T ss_dssp -CCT-TEEEESCC-CHHHHGGGCSEEEEC------CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC---
T ss_pred cCCC-cEEEeCcC-CHHHHHhhCCEEEec------CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCccc
Confidence 3455 89999987 689999999999953 557899999999999999 5555778888888899998876
Q ss_pred -CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHH
Q 001292 554 -NPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRY 598 (1106)
Q Consensus 554 -D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y 598 (1106)
|+++|+++|.++++|++. +++|++.+++......+.+.++.+
T Consensus 353 ~~~~~l~~ai~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l 395 (398)
T 4fzr_A 353 AGVESVLAACARIRDDSSY---VGNARRLAAEMATLPTPADIVRLI 395 (398)
T ss_dssp ----CHHHHHHHHHHCTHH---HHHHHHHHHHHTTSCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 789999999999999988 578888888887777776666544
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=8.3e-15 Score=164.51 Aligned_cols=318 Identities=13% Similarity=0.064 Sum_probs=185.9
Q ss_pred CCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCC----------------CCc--------------------
Q 001292 222 PPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRS----------------GNS-------------------- 265 (1106)
Q Consensus 222 ~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~d----------------g~~-------------------- 265 (1106)
++||+++... ..|....+.+++++|+++||+|++++... +..
T Consensus 1 ~MrIl~~~~~--~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (391)
T 3tsa_A 1 HMRVLVVPLP--YPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQ 78 (391)
T ss_dssp CCEEEEECCS--CHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHBTCEEEEC--------------CCSCCGGGGC
T ss_pred CcEEEEEcCC--CcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhCCCceeeecCCccchhhhhhhccccccccccc
Confidence 4789998865 56667778899999999999999998521 000
Q ss_pred ---hH---HHH-----H-------HhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCc
Q 001292 266 ---HS---LWE-----Q-------IAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDS 327 (1106)
Q Consensus 266 ---~~---i~r-----~-------lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~ 327 (1106)
.. .+. . +..+.++++..+||+|+...+. +...+..+. .++|+|...|+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~--~~~~~aa~~----------~giP~v~~~~~~~ 146 (391)
T 3tsa_A 79 RDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCA--LIGRVLGGL----------LDLPVVLHRWGVD 146 (391)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTC--HHHHHHHHH----------TTCCEEEECCSCC
T ss_pred ccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcch--hHHHHHHHH----------hCCCEEEEecCCc
Confidence 00 000 0 2335677788899998886422 333333332 6899998877753
Q ss_pred ccccchhhhhhhHHhHHHHHHHHhc-----cccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHH
Q 001292 328 LANRLPVYVERGFQNLLSYWKSVFS-----RVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLR 402 (1106)
Q Consensus 328 Ls~r~~~Y~~~gleklis~~~~~l~-----~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR 402 (1106)
......... ...++..+...+. ..+.++.................+..+|..+ . ... .
T Consensus 147 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~---~~~---------~ 209 (391)
T 3tsa_A 147 PTAGPFSDR---AHELLDPVCRHHGLTGLPTPELILDPCPPSLQASDAPQGAPVQYVPYNG--S---GAF---------P 209 (391)
T ss_dssp CTTTHHHHH---HHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCTTSCCCEECCCCCCCC--C---EEC---------C
T ss_pred cccccccch---HHHHHHHHHHHcCCCCCCCCceEEEecChhhcCCCCCccCCeeeecCCC--C---cCC---------C
Confidence 222111111 1222222222221 1255555443322221110110111111100 0 000 0
Q ss_pred HHcC-CCCCcEEEEEEcccCccccccCCH-HHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCC
Q 001292 403 KENG-FLKDEIVVVVVGSSFFYNELSWDY-AVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGL 480 (1106)
Q Consensus 403 ~~lG-L~~d~~VIL~VGRl~~y~kg~Kg~-dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL 480 (1106)
..+. .+++..+++.+|++.. .++. ..+++++... . ..|++++ ++++.++.. +.+. ++
T Consensus 210 ~~~~~~~~~~~vlv~~G~~~~----~~~~~~~~~~~~~~~-~-------~~p~~~~-v~~~~~~~~--~~l~------~~ 268 (391)
T 3tsa_A 210 AWGAARTSARRVCICMGRMVL----NATGPAPLLRAVAAA-T-------ELPGVEA-VIAVPPEHR--ALLT------DL 268 (391)
T ss_dssp GGGSSCCSSEEEEEECCHHHH----HHHCSHHHHHHHHHH-H-------TSTTEEE-EEECCGGGG--GGCT------TC
T ss_pred chhhcCCCCCEEEEEcCCCCC----cccchHHHHHHHHHh-c-------cCCCeEE-EEEECCcch--hhcc------cC
Confidence 1111 1234456666676533 2222 4445554332 2 1267874 555554432 2221 34
Q ss_pred CCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhccCCeEEEEcC----
Q 001292 481 LEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAEGAQVIFFQK---- 552 (1106)
Q Consensus 481 ~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~Dg~nG~LV~~---- 552 (1106)
.+ +|++.|+. +...++..||++|.. +++.+++|||++|+|+|+. +..++.+.+.+...|.++++
T Consensus 269 ~~-~v~~~~~~-~~~~ll~~ad~~v~~------~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~ 340 (391)
T 3tsa_A 269 PD-NARIAESV-PLNLFLRTCELVICA------GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQ 340 (391)
T ss_dssp CT-TEEECCSC-CGGGTGGGCSEEEEC------CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHH
T ss_pred CC-CEEEeccC-CHHHHHhhCCEEEeC------CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCccccc
Confidence 55 89999976 345677999999954 5568999999999999994 55567788888889999987
Q ss_pred CCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 001292 553 DNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 602 (1106)
Q Consensus 553 ~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLy 602 (1106)
.|+++|+++|.++++|++. +++|++.+++......+.+.++.+++++
T Consensus 341 ~~~~~l~~ai~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 387 (391)
T 3tsa_A 341 SDHEQFTDSIATVLGDTGF---AAAAIKLSDEITAMPHPAALVRTLENTA 387 (391)
T ss_dssp TCHHHHHHHHHHHHTCTHH---HHHHHHHHHHHHTSCCHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 6899999999999999987 5778888888877777766666655544
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.2e-13 Score=152.54 Aligned_cols=321 Identities=13% Similarity=0.108 Sum_probs=186.5
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCC--------CC------c-------------hH--------
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRS--------GN------S-------------HS-------- 267 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~d--------g~------~-------------~~-------- 267 (1106)
+||+++... ..|....+++|+++|+++||+|++++... |- . ..
T Consensus 5 ~~il~~~~~--~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (402)
T 3ia7_A 5 RHILFANVQ--GHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLV 82 (402)
T ss_dssp CEEEEECCS--SHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTTCEEEECCCGGGTSSSSSSSCCTTHHHHHHHH
T ss_pred CEEEEEeCC--CCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcCCEEEecccccccccccccccccchHHHHHHH
Confidence 388887653 45777888999999999999999998521 00 0 00
Q ss_pred HHH----HHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhh--------
Q 001292 268 LWE----QIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVY-------- 335 (1106)
Q Consensus 268 i~r----~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y-------- 335 (1106)
..+ .+..+...++..+||+|+..++.... ..+..+. .++|+|...|...........
T Consensus 83 ~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~-~~~aA~~----------~giP~v~~~~~~~~~~~~~~~~~~~~~~~ 151 (402)
T 3ia7_A 83 YVRENVAILRAAEEALGDNPPDLVVYDVFPFIA-GRLLAAR----------WDRPAVRLTGGFAANEHYSLFKELWKSNG 151 (402)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHH-HHHHHHH----------HTCCEEEEESSCCCBTTBCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhccCCCEEEECchHHHH-HHHHHHh----------hCCCEEEEecccccCcccccccccccccc
Confidence 111 12235677778899999886333333 3333322 579999887663221110000
Q ss_pred ---h--hhhHHhHHHHHHHHh----------ccc-cEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHH
Q 001292 336 ---V--ERGFQNLLSYWKSVF----------SRV-NVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKY 399 (1106)
Q Consensus 336 ---~--~~gleklis~~~~~l----------~~A-D~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~ 399 (1106)
+ .......+..+...+ ... +..++...............++.+++.. +.. ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp~-~~~---~~-------- 219 (402)
T 3ia7_A 152 QRHPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETFDERFAFVGPT-LTG---RD-------- 219 (402)
T ss_dssp CCCGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGCCTTEEECCCC-CCC-------------
T ss_pred ccChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccCCCCeEEeCCC-CCC---cc--------
Confidence 0 000011111111111 111 4444444332222211113346666431 211 00
Q ss_pred HHHHHcC--CCCCcEEEEEEcccCccccccC--CHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHH
Q 001292 400 QLRKENG--FLKDEIVVVVVGSSFFYNELSW--DYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVA 475 (1106)
Q Consensus 400 ~LR~~lG--L~~d~~VIL~VGRl~~y~kg~K--g~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLa 475 (1106)
. ...+. .++...++++.|+... .+ ....+++++ .. .++++++++|.+... +.++
T Consensus 220 ~-~~~~~~~~~~~~~v~v~~G~~~~----~~~~~~~~~~~~~-------~~-----~~~~~~~~~g~~~~~--~~~~--- 277 (402)
T 3ia7_A 220 G-QPGWQPPRPDAPVLLVSLGNQFN----EHPEFFRACAQAF-------AD-----TPWHVVMAIGGFLDP--AVLG--- 277 (402)
T ss_dssp ---CCCCCSSTTCCEEEEECCSCSS----CCHHHHHHHHHHH-------TT-----SSCEEEEECCTTSCG--GGGC---
T ss_pred c-CCCCcccCCCCCEEEEECCCCCc----chHHHHHHHHHHH-------hc-----CCcEEEEEeCCcCCh--hhhC---
Confidence 0 00111 2334567778887643 22 122223322 11 125666778876543 2222
Q ss_pred HHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEe-----cCCCCchhhhccCCeEEEE
Q 001292 476 SRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVIT-----PDFPIIKEYVAEGAQVIFF 550 (1106)
Q Consensus 476 eklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIA-----SD~gGI~EiV~Dg~nG~LV 550 (1106)
.+.+ +|.+.|+..+. .+|+.||++|..| ...+++|||++|+|+|+ .+..++.+.+.+...|.++
T Consensus 278 ---~~~~-~v~~~~~~~~~-~ll~~ad~~v~~~------G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~ 346 (402)
T 3ia7_A 278 ---PLPP-NVEAHQWIPFH-SVLAHARACLTHG------TTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVL 346 (402)
T ss_dssp ---SCCT-TEEEESCCCHH-HHHTTEEEEEECC------CHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEEC
T ss_pred ---CCCC-cEEEecCCCHH-HHHhhCCEEEECC------CHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEc
Confidence 2454 89999988777 9999999999653 34788999999999995 4445677888888899988
Q ss_pred cCC--CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHH
Q 001292 551 QKD--NPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILEN 604 (1106)
Q Consensus 551 ~~~--D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyes 604 (1106)
+.+ ++++|+++|.++++|++. ++++++.+++.....-+...++.+++++..
T Consensus 347 ~~~~~~~~~l~~~~~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 347 RPDQLEPASIREAVERLAADSAV---RERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp CGGGCSHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 766 899999999999999987 466777777666555455555566666653
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1e-12 Score=148.64 Aligned_cols=328 Identities=15% Similarity=0.075 Sum_probs=186.3
Q ss_pred CCCCCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCC------------ch-------------------H
Q 001292 219 GVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN------------SH-------------------S 267 (1106)
Q Consensus 219 g~r~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~------------~~-------------------~ 267 (1106)
..+.+||+++.. ...|-...+++|+++|+++||+|++++..... .. .
T Consensus 17 ~~~m~rIl~~~~--~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (415)
T 3rsc_A 17 GRHMAHLLIVNV--ASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAGATVVPYQSEIIDADAAEVFGSDDLGVR 94 (415)
T ss_dssp --CCCEEEEECC--SCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCSTTTCCHHHHHHSSSSCHH
T ss_pred cccCCEEEEEeC--CCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhcCCEEEeccccccccccchhhccccHHHH
Confidence 344578988875 35677778899999999999999999853210 00 0
Q ss_pred ----HHH----HHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchh-----
Q 001292 268 ----LWE----QIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPV----- 334 (1106)
Q Consensus 268 ----i~r----~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~----- 334 (1106)
..+ ....+...++..+||+|+...+.... ..+..+. .++|+|...|+.........
T Consensus 95 ~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~-~~~aA~~----------~giP~v~~~~~~~~~~~~~~~~~~~ 163 (415)
T 3rsc_A 95 PHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIA-GQLLAAR----------WRRPAVRLSAAFASNEHYSFSQDMV 163 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHH-HHHHHHH----------TTCCEEEEESSCCCCSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhH-HHHHHHH----------hCCCEEEEEecccccCccccccccc
Confidence 111 12235667778899999875333333 2333322 68999998876422111000
Q ss_pred ------hh--hhhHHhHHHHHHHHh----------ccc-cEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcc
Q 001292 335 ------YV--ERGFQNLLSYWKSVF----------SRV-NVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKS 395 (1106)
Q Consensus 335 ------Y~--~~gleklis~~~~~l----------~~A-D~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps 395 (1106)
.+ .......+..+...+ ... +..++...............++.+++.. +.. . .
T Consensus 164 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp~-~~~----~---~ 235 (415)
T 3rsc_A 164 TLAGTIDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDRFVFVGPC-FDD----R---R 235 (415)
T ss_dssp HHHTCCCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGCCTTEEECCCC-CCC----C---G
T ss_pred cccccCChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccCCCceEEeCCC-CCC----c---c
Confidence 00 000111111111111 111 5555544332222211113345565431 111 0 0
Q ss_pred hhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHH
Q 001292 396 HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVA 475 (1106)
Q Consensus 396 ~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLa 475 (1106)
....+. ...++...++++.|+... +..+....+++++ ... + +++++.+|.++.. +.++
T Consensus 236 -~~~~~~--~~~~~~~~v~v~~Gs~~~--~~~~~~~~~~~al-------~~~----~-~~~v~~~g~~~~~--~~l~--- 293 (415)
T 3rsc_A 236 -FLGEWT--RPADDLPVVLVSLGTTFN--DRPGFFRDCARAF-------DGQ----P-WHVVMTLGGQVDP--AALG--- 293 (415)
T ss_dssp -GGCCCC--CCSSCCCEEEEECTTTSC--CCHHHHHHHHHHH-------TTS----S-CEEEEECTTTSCG--GGGC---
T ss_pred -cCcCcc--ccCCCCCEEEEECCCCCC--ChHHHHHHHHHHH-------hcC----C-cEEEEEeCCCCCh--HHhc---
Confidence 000000 012334567777787543 1101122223222 111 2 5666668876543 2222
Q ss_pred HHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhccCCeEEEEc
Q 001292 476 SRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAEGAQVIFFQ 551 (1106)
Q Consensus 476 eklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~Dg~nG~LV~ 551 (1106)
.+.+ +|.+.|+..+. .+|..||++|.. +...+++|||++|+|+|+. +...+.+.+.+...|..++
T Consensus 294 ---~~~~-~v~~~~~~~~~-~ll~~ad~~v~~------~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~ 362 (415)
T 3rsc_A 294 ---DLPP-NVEAHRWVPHV-KVLEQATVCVTH------GGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLP 362 (415)
T ss_dssp ---CCCT-TEEEESCCCHH-HHHHHEEEEEES------CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECC
T ss_pred ---CCCC-cEEEEecCCHH-HHHhhCCEEEEC------CcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcc
Confidence 3455 89999988776 999999999965 3357899999999999994 5555677777777888887
Q ss_pred CC--CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHH
Q 001292 552 KD--NPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILE 603 (1106)
Q Consensus 552 ~~--D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLye 603 (1106)
.+ ++++|+++|.++++|++. ++++.+.+.+.....-+...++.+++++.
T Consensus 363 ~~~~~~~~l~~~i~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 363 GEKADGDTLLAAVGAVAADPAL---LARVEAMRGHVRRAGGAARAADAVEAYLA 413 (415)
T ss_dssp GGGCCHHHHHHHHHHHHTCHHH---HHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 65 899999999999999987 46677777666655445555555555554
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=4.7e-13 Score=151.28 Aligned_cols=319 Identities=13% Similarity=0.072 Sum_probs=181.2
Q ss_pred CCCCCEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCC------------------chHH------------
Q 001292 219 GVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN------------------SHSL------------ 268 (1106)
Q Consensus 219 g~r~~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~------------------~~~i------------ 268 (1106)
..+.+||+|+... ..|....+++|+++|+++||+|+|++. ... ....
T Consensus 17 ~~~~MrIl~~~~~--~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (398)
T 3oti_A 17 EGRHMRVLFVSSP--GIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFA 93 (398)
T ss_dssp --CCCEEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTTTCEEEESSTTCCHHHHHHHHHHHCHHHH
T ss_pred hhhcCEEEEEcCC--CcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhCCCeeEecCCccCHHHHhhhcccCCcccc
Confidence 3456899999764 456666788999999999999999986 310 0000
Q ss_pred ------------------H----HHHhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCC
Q 001292 269 ------------------W----EQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQED 326 (1106)
Q Consensus 269 ------------------~----r~lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna 326 (1106)
. .....+..+++..+||+|+..... +...+..+. .++|+|.+.++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~--~~~~~aA~~----------~giP~v~~~~~~ 161 (398)
T 3oti_A 94 ETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGA--TVGLLAADR----------AGVPAVQRNQSA 161 (398)
T ss_dssp HTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTC--HHHHHHHHH----------HTCCEEEECCTT
T ss_pred ccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchh--hHHHHHHHH----------cCCCEEEEeccC
Confidence 0 011225667777899988774222 222233322 578999876663
Q ss_pred cccccchhhhhhhHHhHHHHHHHHhccccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcC
Q 001292 327 SLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENG 406 (1106)
Q Consensus 327 ~Ls~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lG 406 (1106)
.............+..+...+.......+.++.................+.+++..+-. .. ...+.
T Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---------~~~~~ 227 (398)
T 3oti_A 162 WRTRGMHRSIASFLTDLMDKHQVSLPEPVATIESFPPSLLLEAEPEGWFMRWVPYGGGA-----VL---------GDRLP 227 (398)
T ss_dssp CCCTTHHHHHHTTCHHHHHHTTCCCCCCSEEECSSCGGGGTTSCCCSBCCCCCCCCCCE-----EC---------CSSCC
T ss_pred CCccchhhHHHHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCCCCCCCCCccccCCCCCc-----CC---------chhhh
Confidence 22111110000001111111100011224444443322211100011111122211100 00 00011
Q ss_pred -CCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcE
Q 001292 407 -FLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSV 485 (1106)
Q Consensus 407 -L~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV 485 (1106)
.+++..+++++|++...+++.+....+++++.. .++++ ++++.+.+. +.++ .+.+ +|
T Consensus 228 ~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~------------~~~~~-v~~~g~~~~--~~l~------~~~~-~v 285 (398)
T 3oti_A 228 PVPARPEVAITMGTIELQAFGIGAVEPIIAAAGE------------VDADF-VLALGDLDI--SPLG------TLPR-NV 285 (398)
T ss_dssp CCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT------------SSSEE-EEECTTSCC--GGGC------SCCT-TE
T ss_pred cCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHc------------CCCEE-EEEECCcCh--hhhc------cCCC-cE
Confidence 123456777788764421223334444444421 24564 455544433 2222 3455 89
Q ss_pred EEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEe----cCCCCch--hhhccCCeEEEEcCC--CHHH
Q 001292 486 RHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVIT----PDFPIIK--EYVAEGAQVIFFQKD--NPEG 557 (1106)
Q Consensus 486 ~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIA----SD~gGI~--EiV~Dg~nG~LV~~~--D~ee 557 (1106)
.+.|+. ++..+|..||++|.. +.+.+++|||++|+|+|+ .+..++. +.+.+...|++++.. +++.
T Consensus 286 ~~~~~~-~~~~ll~~ad~~v~~------~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~ 358 (398)
T 3oti_A 286 RAVGWT-PLHTLLRTCTAVVHH------GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADL 358 (398)
T ss_dssp EEESSC-CHHHHHTTCSEEEEC------CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHH
T ss_pred EEEccC-CHHHHHhhCCEEEEC------CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHH
Confidence 999998 899999999999954 556899999999999999 6778888 999888899998765 5666
Q ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 001292 558 LSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 602 (1106)
Q Consensus 558 LAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLy 602 (1106)
|+ ++++|+++ +++|++.+++......+.+.++.+++++
T Consensus 359 l~----~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 359 LR----RLIGDESL---RTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp HH----HHHHCHHH---HHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HH----HHHcCHHH---HHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 65 88899987 5778888888887777777776666553
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-12 Score=149.35 Aligned_cols=307 Identities=12% Similarity=0.047 Sum_probs=188.4
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCC---Cc-------------------------hHHHHHHhH
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSG---NS-------------------------HSLWEQIAG 274 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg---~~-------------------------~~i~r~lg~ 274 (1106)
.++++|+|. -++-+-+.+++++|++. ++..++.++.. .. ....+.+..
T Consensus 10 ~~~~~v~Gt---Rpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~ 85 (385)
T 4hwg_A 10 LKVMTIVGT---RPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFDDMGIRKPDYFLEVAADNTAKSIGLVIEK 85 (385)
T ss_dssp CEEEEEECS---HHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC-CCCCCCSEECCCCCCCSHHHHHHHHHH
T ss_pred hheeEEEEc---CHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHhhCCCCCCceecCCCCCCHHHHHHHHHHH
Confidence 356666643 35567788899999887 77766654321 01 111112223
Q ss_pred HHHHhhccCccEEEEcccc-HHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHhcc
Q 001292 275 QISILGQEQYSLIDWSIFD-GIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSR 353 (1106)
Q Consensus 275 lvkiIr~~~pDiIh~~~~~-~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l~~ 353 (1106)
+.++++..+||+++.+... ..+. .++.+. .+||++.. +. ++...-..++. .....+. -..
T Consensus 86 l~~~l~~~kPD~Vlv~gd~~~~~a-alaA~~----------~~IPv~h~-ea-glrs~~~~~pe----e~nR~~~--~~~ 146 (385)
T 4hwg_A 86 VDEVLEKEKPDAVLFYGDTNSCLS-AIAAKR----------RKIPIFHM-EA-GNRCFDQRVPE----EINRKII--DHI 146 (385)
T ss_dssp HHHHHHHHCCSEEEEESCSGGGGG-HHHHHH----------TTCCEEEE-SC-CCCCSCTTSTH----HHHHHHH--HHH
T ss_pred HHHHHHhcCCcEEEEECCchHHHH-HHHHHH----------hCCCEEEE-eC-CCccccccCcH----HHHHHHH--Hhh
Confidence 6778888999999887533 2233 444432 68997654 33 22110001111 1111111 135
Q ss_pred ccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccC-cchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCH
Q 001292 354 VNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYS-KSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDY 430 (1106)
Q Consensus 354 AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~-ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~ 430 (1106)
+|.+++++...... ..|++++++.+++|.++|. ..+. +...+..+++++|++++..+++..||... .+..++.
T Consensus 147 a~~~~~~te~~~~~l~~~G~~~~~I~vtGnp~~D~---~~~~~~~~~~~~~~~~lgl~~~~~iLvt~hr~e~-~~~~~~l 222 (385)
T 4hwg_A 147 SDVNITLTEHARRYLIAEGLPAELTFKSGSHMPEV---LDRFMPKILKSDILDKLSLTPKQYFLISSHREEN-VDVKNNL 222 (385)
T ss_dssp CSEEEESSHHHHHHHHHTTCCGGGEEECCCSHHHH---HHHHHHHHHHCCHHHHTTCCTTSEEEEEECCC------CHHH
T ss_pred hceeecCCHHHHHHHHHcCCCcCcEEEECCchHHH---HHHhhhhcchhHHHHHcCCCcCCEEEEEeCCchh-cCcHHHH
Confidence 78888888765544 5688888999999876774 1121 11234457888999876666666665321 0112467
Q ss_pred HHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHc-C-CC-CCcEEEcCCh--hhHHHHHHHcCeEE
Q 001292 431 AVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRL-G-LL-EHSVRHYGFN--GDVNGVLLMADIVL 505 (1106)
Q Consensus 431 dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaekl-G-L~-d~rV~flG~~--eDL~~LyaaADVfV 505 (1106)
..+++|+..+.+++ ++. ++++.+| .+++.++++ | +. ..+|+++++. .++..+|+.||+++
T Consensus 223 ~~ll~al~~l~~~~--------~~~--vv~p~~p-----~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvv 287 (385)
T 4hwg_A 223 KELLNSLQMLIKEY--------NFL--IIFSTHP-----RTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCIL 287 (385)
T ss_dssp HHHHHHHHHHHHHH--------CCE--EEEEECH-----HHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEE
T ss_pred HHHHHHHHHHHhcC--------CeE--EEEECCh-----HHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEE
Confidence 88899998776432 334 3444444 255556555 4 31 1289998865 37899999999999
Q ss_pred EccCCCCCCCcHHHHHHHHhCCCEEecCC-CCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Q 001292 506 YGSSQVEQGFPSLIVRAMTFGIPVITPDF-PIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGR 583 (1106)
Q Consensus 506 ~PS~~EeEGFGlvLLEAMA~G~PVIASD~-gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Ar 583 (1106)
..| |.+.+||+++|+|||+.+. .+..|.+..| ++.++. .|++++++++..+++|+.. ++.|+.++.
T Consensus 288 t~S-------Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv~-~d~~~i~~ai~~ll~d~~~---~~~m~~~~~ 354 (385)
T 4hwg_A 288 SDS-------GTITEEASILNLPALNIREAHERPEGMDAG-TLIMSG-FKAERVLQAVKTITEEHDN---NKRTQGLVP 354 (385)
T ss_dssp ECC-------TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEECC-SSHHHHHHHHHHHHTTCBT---TBCCSCCCH
T ss_pred ECC-------ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEcC-CCHHHHHHHHHHHHhChHH---HHHhhccCC
Confidence 554 2357999999999999754 3457777666 666665 4899999999999999886 344444333
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.40 E-value=4e-11 Score=134.44 Aligned_cols=161 Identities=15% Similarity=0.119 Sum_probs=111.5
Q ss_pred CcEEEEEEcccCcc---ccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEE
Q 001292 410 DEIVVVVVGSSFFY---NELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVR 486 (1106)
Q Consensus 410 d~~VIL~VGRl~~y---~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~ 486 (1106)
...+++++|++... +.+.+....+++++..+ ++++++++|. ++ .+.++. +++ +|.
T Consensus 210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~------------~~~~~~~~g~-~~--~~~l~~------~~~-~v~ 267 (384)
T 2p6p_A 210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW------------DVELIVAAPD-TV--AEALRA------EVP-QAR 267 (384)
T ss_dssp SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT------------TCEEEEECCH-HH--HHHHHH------HCT-TSE
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhcC------------CcEEEEEeCC-CC--HHhhCC------CCC-ceE
Confidence 45688888987652 10235677777777421 3464444453 22 133321 344 788
Q ss_pred EcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCC----chhhhccCCeEEEEcCC--CHHHHHH
Q 001292 487 HYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVAEGAQVIFFQKD--NPEGLSR 560 (1106)
Q Consensus 487 flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gG----I~EiV~Dg~nG~LV~~~--D~eeLAe 560 (1106)
+ |+. +...+|..||++|.. +++++++|||++|+|+|+....+ +.+.+.+...|++++.. ++++|++
T Consensus 268 ~-~~~-~~~~~l~~~d~~v~~------~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~ 339 (384)
T 2p6p_A 268 V-GWT-PLDVVAPTCDLLVHH------AGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAIAD 339 (384)
T ss_dssp E-ECC-CHHHHGGGCSEEEEC------SCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHHHH
T ss_pred E-cCC-CHHHHHhhCCEEEeC------CcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCHHHHHH
Confidence 9 977 467899999999975 44578999999999999987643 66777776789888764 7999999
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHH
Q 001292 561 AFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILE 603 (1106)
Q Consensus 561 AI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLye 603 (1106)
+|.++++|+++ ++++++.+++.....-..+.+....+++.
T Consensus 340 ~i~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 340 SCQELQAKDTY---ARRAQDLSREISGMPLPATVVTALEQLAH 379 (384)
T ss_dssp HHHHHHHCHHH---HHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCHHH---HHHHHHHHHHHHhCCCHHHHHHHHHHHhh
Confidence 99999999987 56777777776665555555555555443
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.21 E-value=5e-09 Score=119.30 Aligned_cols=132 Identities=16% Similarity=0.103 Sum_probs=91.6
Q ss_pred CCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEe
Q 001292 452 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVIT 531 (1106)
Q Consensus 452 PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIA 531 (1106)
.++++++++|.+.+. +.++ .+++ +|.+.++..+. .+|+.||++|.. ++.++++|||++|+|+|+
T Consensus 283 ~~~~~~~~~g~~~~~--~~~~------~~~~-~v~~~~~~~~~-~~l~~~d~~v~~------~G~~t~~Ea~~~G~P~i~ 346 (424)
T 2iya_A 283 LDWHVVLSVGRFVDP--ADLG------EVPP-NVEVHQWVPQL-DILTKASAFITH------AGMGSTMEALSNAVPMVA 346 (424)
T ss_dssp CSSEEEEECCTTSCG--GGGC------SCCT-TEEEESSCCHH-HHHTTCSEEEEC------CCHHHHHHHHHTTCCEEE
T ss_pred CCcEEEEEECCcCCh--HHhc------cCCC-CeEEecCCCHH-HHHhhCCEEEEC------CchhHHHHHHHcCCCEEE
Confidence 345666778876543 2221 2455 89999988777 899999998854 446899999999999999
Q ss_pred cCCC----CchhhhccCCeEEEEcCC--CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 001292 532 PDFP----IIKEYVAEGAQVIFFQKD--NPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 602 (1106)
Q Consensus 532 SD~g----GI~EiV~Dg~nG~LV~~~--D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLy 602 (1106)
.... .+.+.+.+...|+.++.. ++++|+++|.++++|++. ++++.+.+++.....-....++..++++
T Consensus 347 ~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 347 VPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGV---AERLAAVRQEIREAGGARAAADILEGIL 420 (424)
T ss_dssp CCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred ecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 8664 345666666788887654 899999999999999987 3555555554443322233333444443
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.20 E-value=4.9e-10 Score=128.83 Aligned_cols=161 Identities=13% Similarity=0.086 Sum_probs=107.8
Q ss_pred CcEEEEEEcccCcc-ccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEc
Q 001292 410 DEIVVVVVGSSFFY-NELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY 488 (1106)
Q Consensus 410 d~~VIL~VGRl~~y-~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~fl 488 (1106)
...+++++|++... +...+....+++++..+ ++++++.+| +++. +.++ .+++ +|.+.
T Consensus 267 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~------------~~~~v~~~g-~~~~--~~l~------~~~~-~v~~~ 324 (441)
T 2yjn_A 267 RRRVCLTLGISSRENSIGQVSIEELLGAVGDV------------DAEIIATFD-AQQL--EGVA------NIPD-NVRTV 324 (441)
T ss_dssp SCEEEEEC----------CCSTTTTHHHHHTS------------SSEEEECCC-TTTT--SSCS------SCCS-SEEEC
T ss_pred CCEEEEECCCCcccccChHHHHHHHHHHHHcC------------CCEEEEEEC-Ccch--hhhc------cCCC-CEEEe
Confidence 34577888876541 01245666777777322 345444444 3322 2121 3455 89999
Q ss_pred CChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCC----CchhhhccCCeEEEEcCC--CHHHHHHHH
Q 001292 489 GFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEGAQVIFFQKD--NPEGLSRAF 562 (1106)
Q Consensus 489 G~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~g----GI~EiV~Dg~nG~LV~~~--D~eeLAeAI 562 (1106)
|+..+ ..+|..||++|.. +++.+++|||++|+|+|+.... .+.+.+.+...|++++.. ++++|+++|
T Consensus 325 ~~~~~-~~ll~~ad~~V~~------~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i 397 (441)
T 2yjn_A 325 GFVPM-HALLPTCAATVHH------GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESV 397 (441)
T ss_dssp CSCCH-HHHGGGCSEEEEC------CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHH
T ss_pred cCCCH-HHHHhhCCEEEEC------CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHH
Confidence 98866 7789999999964 5568999999999999999774 356777777789888765 899999999
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 001292 563 SLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 602 (1106)
Q Consensus 563 ~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLy 602 (1106)
.++++|++. ++++++.+++.....-..+.++.+++++
T Consensus 398 ~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 434 (441)
T 2yjn_A 398 KRVLDDPAH---RAGAARMRDDMLAEPSPAEVVGICEELA 434 (441)
T ss_dssp HHHHHCHHH---HHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHhcCHHH---HHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 999999987 5667777776666555555555555544
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.15 E-value=1.2e-09 Score=131.61 Aligned_cols=224 Identities=9% Similarity=0.012 Sum_probs=143.4
Q ss_pred hccccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCC--cEEEEEEcccCccccccC
Q 001292 351 FSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKD--EIVVVVVGSSFFYNELSW 428 (1106)
Q Consensus 351 l~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d--~~VIL~VGRl~~y~kg~K 428 (1106)
+...|++++....... .....+++..+|++.+ .|.|.... ..|..++++.+ .++++.+.+. .|
T Consensus 388 l~~iDY~i~D~~~~~~--~~~ysEklirLP~~~~------~~~p~~~~-p~r~~~~lp~~~G~v~Fg~fn~~------~K 452 (631)
T 3q3e_A 388 SDFIEYVIVEDDYVGS--EECFSETLLRLPKDAL------PYVPSALA-PEKVDYLLRENPEVVNIGIASTT------MK 452 (631)
T ss_dssp CTTCCEEEEEGGGCCC--GGGCSSEEEEECTTSS------CCCCCTTC-CSSCCCCCCSCCSEEEEEEEECS------TT
T ss_pred cccCCEEEeCCCCCCc--ccCceeeEEECCCCcc------ccCCcccC-CccccccCCcCCCeEEEEECCcc------cc
Confidence 3456777775422111 2234678888887422 12221111 11455677765 6677777653 45
Q ss_pred CHHHHHHHHHHhHHHHHhhccCCCCeEE-EEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEE
Q 001292 429 DYAVAMHDVGPLLIKYARRNSVEGSFKF-VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVL 505 (1106)
Q Consensus 429 g~dlLLeA~k~Ll~k~aklk~~~Pdikf-LIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV 505 (1106)
..+.+++++.+++++. |+..+ ++++|.++.. ...+.+.+.+.|+.+ +|.|.|.. .+....|+.+||++
T Consensus 453 i~p~~l~~WarIL~~v-------P~s~L~l~~~g~~~g~-~~~~~~~~~~~GI~~-Rv~F~g~~p~~e~la~y~~aDIfL 523 (631)
T 3q3e_A 453 LNPYFLEALKAIRDRA-------KVKVHFHFALGQSNGI-THPYVERFIKSYLGD-SATAHPHSPYHQYLRILHNCDMMV 523 (631)
T ss_dssp CCHHHHHHHHHHHHHC-------SSEEEEEEEESSCCGG-GHHHHHHHHHHHHGG-GEEEECCCCHHHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHHHhC-------CCcEEEEEecCCCchh-hHHHHHHHHHcCCCc-cEEEcCCCCHHHHHHHHhcCcEEE
Confidence 6788999999888654 55443 2346754321 233444456779986 99999954 67889999999999
Q ss_pred EccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhc------cCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHH
Q 001292 506 YGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVA------EGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVA 579 (1106)
Q Consensus 506 ~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~------Dg~nG~LV~~~D~eeLAeAI~~LLsDpelRk~r~~mG 579 (1106)
-|+.+ ++|++.+|||+||+|||+..-.....-+. -|-.++++. .|.+++++...+|.+|+++ ++++.
T Consensus 524 Dpfpy---~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA-~d~eeYv~~Av~La~D~~~---l~~LR 596 (631)
T 3q3e_A 524 NPFPF---GNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA-NTVDEYVERAVRLAENHQE---RLELR 596 (631)
T ss_dssp CCSSS---CCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE-SSHHHHHHHHHHHHHCHHH---HHHHH
T ss_pred eCCcc---cCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec-CCHHHHHHHHHHHhCCHHH---HHHHH
Confidence 99865 56999999999999999976655554332 233332222 4799999999999999998 57777
Q ss_pred HHHHHHHHH--hcHHHHHHHHHHHHHHHh
Q 001292 580 SAGRLHAKN--MLALDCVTRYARILENVL 606 (1106)
Q Consensus 580 e~Are~ake--~fsee~v~~Y~eLyeslL 606 (1106)
++.++.... .|. ..+.+|+++|+++.
T Consensus 597 ~~Lr~~~~~spLFd-~~~~~~e~~ye~~~ 624 (631)
T 3q3e_A 597 RYIIENNGLNTLFT-GDPRPMGQVFLEKL 624 (631)
T ss_dssp HHHHHSCCHHHHTC-SCCTHHHHHHHHHH
T ss_pred HHHHHHhhhCCCcc-hhHHHHHHHHHHHH
Confidence 777666432 232 22335555555543
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=4.1e-08 Score=110.08 Aligned_cols=84 Identities=12% Similarity=0.083 Sum_probs=63.7
Q ss_pred CCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhhccCCeEEEEcCCC
Q 001292 479 GLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYVAEGAQVIFFQKDN 554 (1106)
Q Consensus 479 GL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV~Dg~nG~LV~~~D 554 (1106)
.+++ +|.+.++. ....+|..+|+||.- ++.++++|||++|+|+|+. |...+.+.+.+...|+.++ +
T Consensus 285 ~~~~-~v~~~~~~-p~~~lL~~~~~~v~h------~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~--~ 354 (400)
T 4amg_A 285 ELPA-NVRVVEWI-PLGALLETCDAIIHH------GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAE--A 354 (400)
T ss_dssp CCCT-TEEEECCC-CHHHHHTTCSEEEEC------CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECC--T
T ss_pred cCCC-CEEEEeec-CHHHHhhhhhheecc------CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcC--C
Confidence 4555 89999876 467789999998843 5668999999999999985 4444666676655676665 4
Q ss_pred HHHHHHHHHHHHhCcccH
Q 001292 555 PEGLSRAFSLFISNGKLS 572 (1106)
Q Consensus 555 ~eeLAeAI~~LLsDpelR 572 (1106)
.+.++++|.++++|+++|
T Consensus 355 ~~~~~~al~~lL~d~~~r 372 (400)
T 4amg_A 355 GSLGAEQCRRLLDDAGLR 372 (400)
T ss_dssp TTCSHHHHHHHHHCHHHH
T ss_pred CCchHHHHHHHHcCHHHH
Confidence 445788999999999874
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.92 E-value=4.2e-09 Score=105.41 Aligned_cols=131 Identities=17% Similarity=0.154 Sum_probs=92.5
Q ss_pred CCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEc
Q 001292 409 KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY 488 (1106)
Q Consensus 409 ~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~fl 488 (1106)
+...+++++|++.. ....|....+++++..+ +.++++++| +... + .+++ +|++.
T Consensus 20 ~~~~vlv~~Gs~~~-~~~~~~~~~~~~al~~~------------~~~~~~~~g-~~~~--~---------~~~~-~v~~~ 73 (170)
T 2o6l_A 20 ENGVVVFSLGSMVS-NMTEERANVIASALAQI------------PQKVLWRFD-GNKP--D---------TLGL-NTRLY 73 (170)
T ss_dssp TTCEEEEECCSCCT-TCCHHHHHHHHHHHTTS------------SSEEEEECC-SSCC--T---------TCCT-TEEEE
T ss_pred CCCEEEEECCCCcc-cCCHHHHHHHHHHHHhC------------CCeEEEEEC-CcCc--c---------cCCC-cEEEe
Confidence 34668888887642 11134555666665221 245444444 3322 1 3455 89999
Q ss_pred CChhhHHHHH--HHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCC----CchhhhccCCeEEEEcCC--CHHHHHH
Q 001292 489 GFNGDVNGVL--LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEGAQVIFFQKD--NPEGLSR 560 (1106)
Q Consensus 489 G~~eDL~~Ly--aaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~g----GI~EiV~Dg~nG~LV~~~--D~eeLAe 560 (1106)
|+..+ ..++ ..||++|.. +++.+++|||++|+|+|+.... +..+.+.+...|++++.. ++++|++
T Consensus 74 ~~~~~-~~~l~~~~ad~~I~~------~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~ 146 (170)
T 2o6l_A 74 KWIPQ-NDLLGHPKTRAFITH------GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLN 146 (170)
T ss_dssp SSCCH-HHHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHH
T ss_pred cCCCH-HHHhcCCCcCEEEEc------CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHH
Confidence 98755 4566 999999964 5579999999999999999764 456778777899998766 8999999
Q ss_pred HHHHHHhCcccH
Q 001292 561 AFSLFISNGKLS 572 (1106)
Q Consensus 561 AI~~LLsDpelR 572 (1106)
+|.++++|++++
T Consensus 147 ~i~~ll~~~~~~ 158 (170)
T 2o6l_A 147 ALKRVINDPSYK 158 (170)
T ss_dssp HHHHHHHCHHHH
T ss_pred HHHHHHcCHHHH
Confidence 999999998763
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.2e-07 Score=117.02 Aligned_cols=182 Identities=12% Similarity=0.093 Sum_probs=122.8
Q ss_pred HHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCC
Q 001292 402 RKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLL 481 (1106)
Q Consensus 402 R~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~ 481 (1106)
|..+|++++.++++.+.++. |=...+++.+.+++.+. |+.+ |++....... ...+++.+++.|+.
T Consensus 514 R~~~gLp~~~v~f~~fN~~~------Ki~p~~~~~W~~IL~~v-------P~S~-L~Ll~~~~~~-~~~l~~~~~~~gi~ 578 (723)
T 4gyw_A 514 RSQYGLPEDAIVYCNFNQLY------KIDPSTLQMWANILKRV-------PNSV-LWLLRFPAVG-EPNIQQYAQNMGLP 578 (723)
T ss_dssp GGGGTCCTTSEEEECCSCGG------GCCHHHHHHHHHHHHHC-------SSEE-EEEEETTGGG-HHHHHHHHHHTTCC
T ss_pred hhhcCCCCCCEEEEeCCccc------cCCHHHHHHHHHHHHhC-------CCCe-EEEEeCcHHH-HHHHHHHHHhcCCC
Confidence 56788998988887776543 34466788888887654 7877 4555544332 47889999999998
Q ss_pred CCcEEEcCC--hhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCch-----hhhcc-CCeEEEEcCC
Q 001292 482 EHSVRHYGF--NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK-----EYVAE-GAQVIFFQKD 553 (1106)
Q Consensus 482 d~rV~flG~--~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~-----EiV~D-g~nG~LV~~~ 553 (1106)
..+|+|.+. ..+....|..+||++=|--+ +.+.+.+||+.+|+|||+-.-.... .++.. |-..++ ..
T Consensus 579 ~~r~~f~~~~~~~~~l~~~~~~Di~LDt~p~---~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~i--a~ 653 (723)
T 4gyw_A 579 QNRIIFSPVAPKEEHVRRGQLADVCLDTPLC---NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELI--AK 653 (723)
T ss_dssp GGGEEEEECCCHHHHHHHGGGCSEEECCSSS---CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGB--CS
T ss_pred cCeEEECCCCCHHHHHHHhCCCeEEeCCCCc---CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccc--cC
Confidence 779999994 46778889999999976555 7799999999999999985322111 11111 111112 25
Q ss_pred CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH--hcH-HHHHHHHHHHHHHHh
Q 001292 554 NPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKN--MLA-LDCVTRYARILENVL 606 (1106)
Q Consensus 554 D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ake--~fs-ee~v~~Y~eLyeslL 606 (1106)
|.+++.+.-.+|.+|++. +.++...-++.... .|. ...+..+++.|+.+-
T Consensus 654 ~~~~Y~~~a~~la~d~~~---l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w 706 (723)
T 4gyw_A 654 NRQEYEDIAVKLGTDLEY---LKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMW 706 (723)
T ss_dssp SHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHH
Confidence 899999999999999987 45554444444333 233 333335555555543
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.83 E-value=6.5e-07 Score=102.03 Aligned_cols=157 Identities=14% Similarity=-0.046 Sum_probs=102.5
Q ss_pred CcEEEEEEcccC-ccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEc
Q 001292 410 DEIVVVVVGSSF-FYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY 488 (1106)
Q Consensus 410 d~~VIL~VGRl~-~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~fl 488 (1106)
+..++++.|++. . .+..+.++++++.+ +.++++++|.+... . ..+++ +|.+.
T Consensus 238 ~~~v~v~~Gs~~~~----~~~~~~~~~al~~~------------~~~~v~~~g~~~~~----~------~~~~~-~v~~~ 290 (415)
T 1iir_A 238 PPPVYLGFGSLGAP----ADAVRVAIDAIRAH------------GRRVILSRGWADLV----L------PDDGA-DCFAI 290 (415)
T ss_dssp SCCEEEECC---CC----HHHHHHHHHHHHHT------------TCCEEECTTCTTCC----C------SSCGG-GEEEC
T ss_pred CCeEEEeCCCCCCc----HHHHHHHHHHHHHC------------CCeEEEEeCCCccc----c------cCCCC-CEEEe
Confidence 355777888763 3 44455666666432 12445556766432 0 23454 89999
Q ss_pred CChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCC----chhhhccCCeEEEEcCC--CHHHHHHHH
Q 001292 489 GFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVAEGAQVIFFQKD--NPEGLSRAF 562 (1106)
Q Consensus 489 G~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gG----I~EiV~Dg~nG~LV~~~--D~eeLAeAI 562 (1106)
++..+ ..+|..||++|.. +..++++|||++|+|+|+....+ ..+.+.+...|+.++.. ++++|+++|
T Consensus 291 ~~~~~-~~~l~~~d~~v~~------~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i 363 (415)
T 1iir_A 291 GEVNH-QVLFGRVAAVIHH------GGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAAL 363 (415)
T ss_dssp SSCCH-HHHGGGSSEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHH
T ss_pred CcCCh-HHHHhhCCEEEeC------CChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHH
Confidence 98765 4678999999964 44589999999999999986543 55667666788887653 799999999
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC
Q 001292 563 SLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNF 608 (1106)
Q Consensus 563 ~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk~ 608 (1106)
.++ +|++. ++++.+.+++. ...+..+...+.+++++..
T Consensus 364 ~~l-~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 364 ATA-LTPET---HARATAVAGTI----RTDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp HHH-TSHHH---HHHHHHHHHHS----CSCHHHHHHHHHHHHHHTC
T ss_pred HHH-cCHHH---HHHHHHHHHHH----hhcChHHHHHHHHHHHHhc
Confidence 999 88776 34444444332 2234444556666666553
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=1.9e-07 Score=106.45 Aligned_cols=138 Identities=17% Similarity=0.061 Sum_probs=91.4
Q ss_pred CcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcC
Q 001292 410 DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 489 (1106)
Q Consensus 410 d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG 489 (1106)
+.++++..|++.. ..+....+++++..+ ++++++.+|..... ..++.+ +|.+.+
T Consensus 221 ~~~Vlv~~Gs~~~---~~~~~~~~~~al~~~------------~~~vv~~~g~~~~~----------~~~~~~-~v~~~~ 274 (404)
T 3h4t_A 221 SPPVYVGFGSGPA---PAEAARVAIEAVRAQ------------GRRVVLSSGWAGLG----------RIDEGD-DCLVVG 274 (404)
T ss_dssp SCCEEECCTTSCC---CTTHHHHHHHHHHHT------------TCCEEEECTTTTCC----------CSSCCT-TEEEES
T ss_pred CCeEEEECCCCCC---cHHHHHHHHHHHHhC------------CCEEEEEeCCcccc----------cccCCC-CEEEec
Confidence 4557777787652 234456666666432 23444555543221 123454 899999
Q ss_pred ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCC----chhhhccCCeEEEEcCC--CHHHHHHHHH
Q 001292 490 FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVAEGAQVIFFQKD--NPEGLSRAFS 563 (1106)
Q Consensus 490 ~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gG----I~EiV~Dg~nG~LV~~~--D~eeLAeAI~ 563 (1106)
+... ..++..||++|.. +...++.||+++|+|+|+....+ ..+.+.+...|..++.. ++++|+++|.
T Consensus 275 ~~~~-~~ll~~~d~~v~~------gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~ 347 (404)
T 3h4t_A 275 EVNH-QVLFGRVAAVVHH------GGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALA 347 (404)
T ss_dssp SCCH-HHHGGGSSEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHH
T ss_pred CCCH-HHHHhhCcEEEEC------CcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHH
Confidence 8754 7889999999955 44578999999999999975543 34556555678877643 7999999999
Q ss_pred HHHhCcccHHHHHHHHHHHHH
Q 001292 564 LFISNGKLSKFARTVASAGRL 584 (1106)
Q Consensus 564 ~LLsDpelRk~r~~mGe~Are 584 (1106)
++++ ++. ++++.+.+..
T Consensus 348 ~ll~-~~~---~~~~~~~~~~ 364 (404)
T 3h4t_A 348 TALT-PGI---RARAAAVAGT 364 (404)
T ss_dssp HHTS-HHH---HHHHHHHHTT
T ss_pred HHhC-HHH---HHHHHHHHHH
Confidence 9998 765 3444444433
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.69 E-value=3.2e-06 Score=96.16 Aligned_cols=139 Identities=14% Similarity=0.012 Sum_probs=92.0
Q ss_pred cEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCC
Q 001292 411 EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF 490 (1106)
Q Consensus 411 ~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~ 490 (1106)
..++++.|+... ....+....++++++.+ +.++++++|.+... . ..+++ +|.+.++
T Consensus 238 ~~v~v~~Gs~~~-~~~~~~~~~~~~al~~~------------~~~~v~~~g~~~~~----~------~~~~~-~v~~~~~ 293 (416)
T 1rrv_A 238 PPVHIGFGSSSG-RGIADAAKVAVEAIRAQ------------GRRVILSRGWTELV----L------PDDRD-DCFAIDE 293 (416)
T ss_dssp CCEEECCTTCCS-HHHHHHHHHHHHHHHHT------------TCCEEEECTTTTCC----C------SCCCT-TEEEESS
T ss_pred CeEEEecCCCCc-cChHHHHHHHHHHHHHC------------CCeEEEEeCCcccc----c------cCCCC-CEEEecc
Confidence 456777786532 01122334444444321 23455666876421 1 24555 8999998
Q ss_pred hhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCC----CchhhhccCCeEEEEcC--CCHHHHHHHHHH
Q 001292 491 NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEGAQVIFFQK--DNPEGLSRAFSL 564 (1106)
Q Consensus 491 ~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~g----GI~EiV~Dg~nG~LV~~--~D~eeLAeAI~~ 564 (1106)
.. ...+|..||++|.- +...+++|||++|+|+|+.... .+.+.+.+...|..++. .++++|+++|.+
T Consensus 294 ~~-~~~ll~~~d~~v~~------~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ 366 (416)
T 1rrv_A 294 VN-FQALFRRVAAVIHH------GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTT 366 (416)
T ss_dssp CC-HHHHGGGSSEEEEC------CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHH
T ss_pred CC-hHHHhccCCEEEec------CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHH
Confidence 75 57789999999963 5568999999999999997553 35566766678887764 478999999999
Q ss_pred HHhCcccHHHHHHHHHHHHH
Q 001292 565 FISNGKLSKFARTVASAGRL 584 (1106)
Q Consensus 565 LLsDpelRk~r~~mGe~Are 584 (1106)
+ +|++. ++++.+.+++
T Consensus 367 l-~~~~~---~~~~~~~~~~ 382 (416)
T 1rrv_A 367 V-LAPET---RARAEAVAGM 382 (416)
T ss_dssp H-TSHHH---HHHHHHHTTT
T ss_pred h-hCHHH---HHHHHHHHHH
Confidence 9 98876 3444444433
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00045 Score=85.58 Aligned_cols=149 Identities=14% Similarity=0.057 Sum_probs=104.4
Q ss_pred HHHHcCC--CCCcEEEEEEcccCccccccCCHHHH-HHHHHHhHHHHHhhccC-CCCeEEEEEEcCCCCccHHH------
Q 001292 401 LRKENGF--LKDEIVVVVVGSSFFYNELSWDYAVA-MHDVGPLLIKYARRNSV-EGSFKFVFLCGNSTDGYNDA------ 470 (1106)
Q Consensus 401 LR~~lGL--~~d~~VIL~VGRl~~y~kg~Kg~dlL-LeA~k~Ll~k~aklk~~-~PdikfLIIVG~GperY~ee------ 470 (1106)
+++..|+ .++.++++++.|+.. .|++.++ +..+..+.. ....... -.+.+ +|++|.+...|...
T Consensus 538 l~~~~Gl~vdpd~l~~g~vkRl~e----YKRq~L~~l~~i~~~~~-i~~~~~~~~~p~q-~If~GKA~P~y~~aK~iIkl 611 (824)
T 2gj4_A 538 LEREYKVHINPNSLFDVQVKRIHE----YKRQLLNCLHVITLYNR-IKKEPNKFVVPRT-VMIGGKAAPGYHMAKMIIKL 611 (824)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCG----GGTHHHHHHHHHHHHHH-HHHCTTSCCCCEE-EEEECCCCTTCHHHHHHHHH
T ss_pred HHHHhCCCcCCCcceEeeeecchh----hcchhhHHHHHHHHHHH-HHhCCCCCCCCEE-EEEEEeCCHhHHHHHHHHHH
Confidence 4455665 568899999999888 7788887 777766542 1111110 01456 68899977667666
Q ss_pred HHHHHHHcCCC---CC--cEEEcC-Ch-hhHHHHHHHcCeEEEccC--CCCCCCcHHHHHHHHhCCCEEecCCCCchhhh
Q 001292 471 LQEVASRLGLL---EH--SVRHYG-FN-GDVNGVLLMADIVLYGSS--QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYV 541 (1106)
Q Consensus 471 LkeLaeklGL~---d~--rV~flG-~~-eDL~~LyaaADVfV~PS~--~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV 541 (1106)
+.++++..+-. .+ +|.|+. +. .-...++++||+.++||. .| ..|..=+-||..|.+.|++--|...|+.
T Consensus 612 i~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~E--AsGTs~MKamlNGaLtigtlDGanvEi~ 689 (824)
T 2gj4_A 612 ITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTE--ASGTGNMKFMLNGALTIGTMDGANVEMA 689 (824)
T ss_dssp HHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSC--SCCSHHHHHHHTTCEEEECSCTTHHHHH
T ss_pred HHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCC--CCchHHHHHHHcCceEEEEecCccchhh
Confidence 66776654221 12 466665 44 456789999999999999 76 9999999999999999998767666655
Q ss_pred c--cCCeEEEEcCCCHHHH
Q 001292 542 A--EGAQVIFFQKDNPEGL 558 (1106)
Q Consensus 542 ~--Dg~nG~LV~~~D~eeL 558 (1106)
+ ..+||++|... ++++
T Consensus 690 e~vG~~Ngf~FG~~-~~ev 707 (824)
T 2gj4_A 690 EEAGEENFFIFGMR-VEDV 707 (824)
T ss_dssp HHHCGGGSEECSCC-HHHH
T ss_pred hccCCCCEEEeCCc-HHHH
Confidence 3 34689988753 5555
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00013 Score=90.11 Aligned_cols=189 Identities=11% Similarity=0.028 Sum_probs=125.1
Q ss_pred HHHcCC--CCCcEEEEEEcccCccccccCCHHH-HHHHHHHhHHHHHhhcc-CCCCeEEEEEEcCCCCccHHH------H
Q 001292 402 RKENGF--LKDEIVVVVVGSSFFYNELSWDYAV-AMHDVGPLLIKYARRNS-VEGSFKFVFLCGNSTDGYNDA------L 471 (1106)
Q Consensus 402 R~~lGL--~~d~~VIL~VGRl~~y~kg~Kg~dl-LLeA~k~Ll~k~aklk~-~~PdikfLIIVG~GperY~ee------L 471 (1106)
++.+|+ .++.+++++|.|+.. .|++++ ++..+..+.. ...... ...+++ +|++|.+...|... +
T Consensus 515 ~~~~Gl~vdpd~l~~~~vkRl~e----YKRq~Lnil~ii~~~~~-i~~~~~~~~~p~q-~If~GKA~P~y~~aK~iIk~i 588 (796)
T 1l5w_A 515 KVRTGIEINPQAIFDIQIKRLHE----YKRQHLNLLHILALYKE-IRENPQADRVPRV-FLFGAKAAPGYYLAKNIIFAI 588 (796)
T ss_dssp HHHHCCCCCTTSEEEEEESCCCG----GGTHHHHHHHHHHHHHH-HHTCTTCCCCCEE-EEEECCCCTTCHHHHHHHHHH
T ss_pred HHHhCCCcCCCcceEeeeecchh----hcccCEeHHHHHHHHHH-HhcCCCCCCCCeE-EEEEecCChhHHHHHHHHHHH
Confidence 556675 468899999999888 788898 8888876652 111100 002466 68899977666666 5
Q ss_pred HHHHHHc----CCCCC--cEEEcC-Ch-hhHHHHHHHcCeEEEccC--CCCCCCcHHHHHHHHhCCCEEecCCCCchhhh
Q 001292 472 QEVASRL----GLLEH--SVRHYG-FN-GDVNGVLLMADIVLYGSS--QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYV 541 (1106)
Q Consensus 472 keLaekl----GL~d~--rV~flG-~~-eDL~~LyaaADVfV~PS~--~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV 541 (1106)
..+++.. .++ + +|.|+. +. .-...++++||+.++||. .| ..|..=+-||..|.+.|.+--|...|+.
T Consensus 589 ~~va~~in~Dp~~~-~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~E--AsGTs~MKam~NGaL~iGtLDGanvEi~ 665 (796)
T 1l5w_A 589 NKVADVINNDPLVG-DKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKE--ASGTGNMKLALNGALTVGTLDGANVEIA 665 (796)
T ss_dssp HHHHHHHHTCTTTG-GGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTC--CCCSHHHHHHHTTCEEEECSCTTHHHHH
T ss_pred HHHHHHhccccccC-CceEEEEECCCCHHHHHHHhhhcceeecCCCCCCC--CCchHHHHHHHcCCeeecCcCCeeeehh
Confidence 5555411 122 3 577775 44 456799999999999999 76 9999999999999999988777777765
Q ss_pred cc--CCeEEEEcCCCHHHHHHHH-------HHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 001292 542 AE--GAQVIFFQKDNPEGLSRAF-------SLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 542 ~D--g~nG~LV~~~D~eeLAeAI-------~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk 607 (1106)
++ .+||++|-. +++++.+.- ...-.+|++ +++-.++ ....|+......|..||++++.
T Consensus 666 e~vG~~NgF~FG~-~~~ev~~l~~~~y~a~~~y~~~~~~----~~vvd~~---~~g~fs~~~~~~y~~Ly~~L~~ 732 (796)
T 1l5w_A 666 EKVGEENIFIFGH-TVEQVKAILAKGYDPVKWRKKDKVL----DAVLKEL---ESGKYSDGDKHAFDQMLHSIGK 732 (796)
T ss_dssp HHHCGGGSEECSC-CHHHHHHHHHHCCCHHHHHHHCHHH----HHHHHHH---HHTTTTTTCTTTTHHHHHHTST
T ss_pred hccCCCcEEEecC-CHHHHHHHHHcccCHHHHhhcCHHH----HHHHHHH---HcCCCCCCcHHHHHHHHHHHhc
Confidence 44 359999975 777766322 222234433 2222222 2344543333678999988764
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00046 Score=76.14 Aligned_cols=66 Identities=12% Similarity=0.104 Sum_probs=53.7
Q ss_pred EEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecC
Q 001292 456 FVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 533 (1106)
Q Consensus 456 fLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD 533 (1106)
+.+++|.+... .+++++.+++ .+ +|.+.++.+++.++|+.||++|.+ + |.++.|++++|+|.|.-.
T Consensus 186 i~vv~G~~~~~-~~~l~~~~~~--~~--~v~v~~~~~~m~~~m~~aDlvI~~------g-G~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 186 ISIATSSSNPN-LKKLQKFAKL--HN--NIRLFIDHENIAKLMNESNKLIIS------A-SSLVNEALLLKANFKAIC 251 (282)
T ss_dssp EEEEECTTCTT-HHHHHHHHHT--CS--SEEEEESCSCHHHHHHTEEEEEEE------S-SHHHHHHHHTTCCEEEEC
T ss_pred EEEEECCCchH-HHHHHHHHhh--CC--CEEEEeCHHHHHHHHHHCCEEEEC------C-cHHHHHHHHcCCCEEEEe
Confidence 45788887653 6788777763 22 699999999999999999999974 2 489999999999999864
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00023 Score=87.85 Aligned_cols=190 Identities=13% Similarity=0.091 Sum_probs=124.8
Q ss_pred HHHcCC--CCCcEEEEEEcccCccccccCCHHH-HHHHHHHhHHHHHhhcc-CCCCeEEEEEEcCCCCccHHH------H
Q 001292 402 RKENGF--LKDEIVVVVVGSSFFYNELSWDYAV-AMHDVGPLLIKYARRNS-VEGSFKFVFLCGNSTDGYNDA------L 471 (1106)
Q Consensus 402 R~~lGL--~~d~~VIL~VGRl~~y~kg~Kg~dl-LLeA~k~Ll~k~aklk~-~~PdikfLIIVG~GperY~ee------L 471 (1106)
+++.|+ .++.+++++|.|+.. .|++++ ++..+..+.. ...... ...+++ +|++|.+...|... +
T Consensus 505 ~~~~Gl~vdpd~l~~~~vkRlhe----YKRq~Lnil~ii~~~~~-i~~~~~~~~~p~q-~If~GKA~P~y~~aK~iIk~i 578 (796)
T 2c4m_A 505 LERQGIEIDPESIFDVQIKRLHE----YKRQLMNALYVLDLYFR-IKEDGLTDIPART-VIFGAKAAPGYVRAKAIIKLI 578 (796)
T ss_dssp HHHHCCCCCTTSEEEEEECCCCG----GGTHHHHHHHHHHHHHH-HHTSCCCSSCCEE-EEEECCCCTTCHHHHHHHHHH
T ss_pred HHHhCCCCCCCCcEEEEeecchh----hcccCEeHHHHHHHHHH-HhhCCCCCCCCeE-EEEEecCCHhHHHHHHHHHHH
Confidence 555665 568899999999888 788898 8888876652 111100 002456 68899977666666 5
Q ss_pred HHHHHHc----CCCCC--cEEEcC-Ch-hhHHHHHHHcCeEEEccC--CCCCCCcHHHHHHHHhCCCEEecCCCCchhhh
Q 001292 472 QEVASRL----GLLEH--SVRHYG-FN-GDVNGVLLMADIVLYGSS--QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYV 541 (1106)
Q Consensus 472 keLaekl----GL~d~--rV~flG-~~-eDL~~LyaaADVfV~PS~--~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV 541 (1106)
..+++.. .++ + +|.|+. +. .-...++++||+.++||. .| ..|..=+-||..|.+.|.+--|...|+.
T Consensus 579 ~~va~~in~dp~~~-~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~E--AsGTs~MKam~NGaL~iGtLDGanvEi~ 655 (796)
T 2c4m_A 579 NSIADLVNNDPEVS-PLLKVVFVENYNVSPAEHILPASDVSEQISTAGKE--ASGTSNMKFMMNGALTLGTMDGANVEIV 655 (796)
T ss_dssp HHHHHHHHTCTTTT-TTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSC--SCCHHHHHHHHTTCEEEEESSTHHHHHH
T ss_pred HHHHHHhccccccC-CceEEEEECCCCHHHHHHHhhhcceeecCCCCCCC--CCchHHHHHHHcCCeEEeccCCeEeehh
Confidence 5555411 222 2 466665 54 456799999999999999 76 9999999999999999988777777765
Q ss_pred cc--CCeEEEEcC--CCHHHHHHH---HHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 001292 542 AE--GAQVIFFQK--DNPEGLSRA---FSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 542 ~D--g~nG~LV~~--~D~eeLAeA---I~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk 607 (1106)
++ .+||++|-. .++.++... ....-.+|++ +++-.++ ....|+......|..+|+++++
T Consensus 656 e~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~~~~----~~vvd~~---~~g~fs~~~~~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 656 DSVGEENAYIFGARVEELPALRESYKPYELYETVPGL----KRALDAL---DNGTLNDNNSGLFYDLKHSLIH 721 (796)
T ss_dssp HHHCGGGSEEESCCTTTHHHHHHTCCHHHHHHHSTTH----HHHHHTT---TSSSSCCTTCCHHHHHHHHHHS
T ss_pred hhcCCCcEEEecCchhhHHHHHHhhChHHHhhcCHHH----HHHHHHH---HcCCCCCCCHHHHHHHHHHHHh
Confidence 43 359999965 666666543 2233344543 2222221 1234443222679999998874
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0043 Score=72.72 Aligned_cols=195 Identities=10% Similarity=0.052 Sum_probs=107.1
Q ss_pred HHHHHHhccccEEEecCCChhhh-----hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCC-CCCcEEEEEEc
Q 001292 345 SYWKSVFSRVNVIVFPDYTLPML-----YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGF-LKDEIVVVVVG 418 (1106)
Q Consensus 345 s~~~~~l~~AD~VIa~S~~~~~~-----~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL-~~d~~VIL~VG 418 (1106)
......+..++.+++.+....+. ..... .++..|+. +-........+ ....+.+-++. ++...+.+..|
T Consensus 207 ~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~~v~~vGP--l~~~~~~~~~~--~~~~~~~wLd~~~~~~vVyvsfG 281 (454)
T 3hbf_A 207 HKMGLELPRANAVAINSFATIHPLIENELNSKF-KLLLNVGP--FNLTTPQRKVS--DEHGCLEWLDQHENSSVVYISFG 281 (454)
T ss_dssp HHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS-SCEEECCC--HHHHSCCSCCC--CTTCHHHHHHTSCTTCEEEEECC
T ss_pred HHHHHhhccCCEEEECChhHhCHHHHHHHHhcC-CCEEEECC--ccccccccccc--chHHHHHHHhcCCCCceEEEecC
Confidence 33344577889998888654332 11222 35666654 21100000000 01112222322 33455667777
Q ss_pred ccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHH-HHHHHHcCCCCCcEEEcCChhhHHHH
Q 001292 419 SSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDAL-QEVASRLGLLEHSVRHYGFNGDVNGV 497 (1106)
Q Consensus 419 Rl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeL-keLaeklGL~d~rV~flG~~eDL~~L 497 (1106)
+... ...+.+.+.+..| ... +.+||+.+|.... +.+ ..+.++ ..+ ++.+.++..+ ..+
T Consensus 282 S~~~-----~~~~~~~el~~~l----~~~-----~~~flw~~~~~~~---~~lp~~~~~~--~~~-~~~vv~w~Pq-~~v 340 (454)
T 3hbf_A 282 SVVT-----PPPHELTALAESL----EEC-----GFPFIWSFRGDPK---EKLPKGFLER--TKT-KGKIVAWAPQ-VEI 340 (454)
T ss_dssp SSCC-----CCHHHHHHHHHHH----HHH-----CCCEEEECCSCHH---HHSCTTHHHH--TTT-TEEEESSCCH-HHH
T ss_pred CCCc-----CCHHHHHHHHHHH----HhC-----CCeEEEEeCCcch---hcCCHhHHhh--cCC-ceEEEeeCCH-HHH
Confidence 6543 1223222222222 111 2346777776421 111 111121 233 7888897765 588
Q ss_pred HHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCC----CchhhhccC-CeEEEEcC--CCHHHHHHHHHHHHhCc
Q 001292 498 LLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEG-AQVIFFQK--DNPEGLSRAFSLFISNG 569 (1106)
Q Consensus 498 yaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~g----GI~EiV~Dg-~nG~LV~~--~D~eeLAeAI~~LLsDp 569 (1106)
|+.+++.++-+. ++-++++||+++|+|+|+-... .....+.+. ..|..++. -+.++++++|.++++++
T Consensus 341 L~h~~v~~fvtH----~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~ 415 (454)
T 3hbf_A 341 LKHSSVGVFLTH----SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSE 415 (454)
T ss_dssp HHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSH
T ss_pred HhhcCcCeEEec----CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCC
Confidence 999995444332 5678999999999999996443 345566664 67877754 47899999999999886
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0099 Score=69.40 Aligned_cols=122 Identities=14% Similarity=0.105 Sum_probs=79.0
Q ss_pred eEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHH--HcCeEEEccCCCCCCCcHHHHHHHHhCCCEEe
Q 001292 454 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPVIT 531 (1106)
Q Consensus 454 ikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~Lya--aADVfV~PS~~EeEGFGlvLLEAMA~G~PVIA 531 (1106)
.+||+++|.+.+...+.+.+.... .+ ++.+.++..++ .+|+ ++|+||.- ++.++++||+++|+|+|+
T Consensus 307 ~~~l~~~~~~~~~l~~~~~~~~~~---~~-~~~v~~w~pq~-~vL~h~~~~~fvth------~G~~s~~Eal~~GvP~i~ 375 (463)
T 2acv_A 307 VRFLWSNSAEKKVFPEGFLEWMEL---EG-KGMICGWAPQV-EVLAHKAIGGFVSH------CGWNSILESMWFGVPILT 375 (463)
T ss_dssp CEEEEECCCCGGGSCTTHHHHHHH---HC-SEEEESSCCHH-HHHHSTTEEEEEEC------CCHHHHHHHHHTTCCEEE
T ss_pred CcEEEEECCCcccCChhHHHhhcc---CC-CEEEEccCCHH-HHhCCCccCeEEec------CCchhHHHHHHcCCCeee
Confidence 467788886411111223222210 12 68888877665 5675 68888843 667999999999999999
Q ss_pred cCCC----Cchhh-hccCCeEEEE-c-------CCCHHHHHHHHHHHHh-CcccHHHHHHHHHHHHHHH
Q 001292 532 PDFP----IIKEY-VAEGAQVIFF-Q-------KDNPEGLSRAFSLFIS-NGKLSKFARTVASAGRLHA 586 (1106)
Q Consensus 532 SD~g----GI~Ei-V~Dg~nG~LV-~-------~~D~eeLAeAI~~LLs-DpelRk~r~~mGe~Are~a 586 (1106)
-... ..... +..-..|+.+ . .-+.++++++|.++++ +++.++.++++++.+++-+
T Consensus 376 ~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~ 444 (463)
T 2acv_A 376 WPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAV 444 (463)
T ss_dssp CCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHT
T ss_pred ccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 7543 34455 4565678777 2 2378999999999997 4666655666666555543
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.004 Score=72.59 Aligned_cols=80 Identities=15% Similarity=0.092 Sum_probs=61.8
Q ss_pred cEEEcCChhhHHHHHH--HcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCC----CchhhhccC-CeEEEEcC--CC
Q 001292 484 SVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEG-AQVIFFQK--DN 554 (1106)
Q Consensus 484 rV~flG~~eDL~~Lya--aADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~g----GI~EiV~Dg-~nG~LV~~--~D 554 (1106)
++.+.++..+. .+|+ ++|+||.- ++.++++||+++|+|+|+-... .....+.+. ..|..++. -+
T Consensus 326 ~~~v~~w~pq~-~vL~h~~~~~fvth------~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~ 398 (456)
T 2c1x_A 326 YGMVVPWAPQA-EVLAHEAVGAFVTH------CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFT 398 (456)
T ss_dssp TEEEESCCCHH-HHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCC
T ss_pred ceEEecCCCHH-HHhcCCcCCEEEec------CCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcC
Confidence 78888877664 6788 77888843 6679999999999999997543 345566665 67877753 36
Q ss_pred HHHHHHHHHHHHhCcc
Q 001292 555 PEGLSRAFSLFISNGK 570 (1106)
Q Consensus 555 ~eeLAeAI~~LLsDpe 570 (1106)
.++++++|.++++|++
T Consensus 399 ~~~l~~~i~~ll~~~~ 414 (456)
T 2c1x_A 399 KSGLMSCFDQILSQEK 414 (456)
T ss_dssp HHHHHHHHHHHHHSHH
T ss_pred HHHHHHHHHHHHCCCc
Confidence 8999999999999874
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=96.61 E-value=0.023 Score=66.45 Aligned_cols=80 Identities=15% Similarity=0.058 Sum_probs=59.9
Q ss_pred cEEEcCChhhHHHHHHHcCe--EEEccCCCCCCCcHHHHHHHHhCCCEEecCCC----Cchhhhc-cCCeEEEEcC-CCH
Q 001292 484 SVRHYGFNGDVNGVLLMADI--VLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVA-EGAQVIFFQK-DNP 555 (1106)
Q Consensus 484 rV~flG~~eDL~~LyaaADV--fV~PS~~EeEGFGlvLLEAMA~G~PVIASD~g----GI~EiV~-Dg~nG~LV~~-~D~ 555 (1106)
++.+.++..++ .+|+.+++ ||.- ++.++++||+++|+|+|+-... .....+. .-..|+.++. -+.
T Consensus 354 ~~~v~~~~pq~-~~L~h~~~~~~vth------~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~ 426 (482)
T 2pq6_A 354 RGLIASWCPQD-KVLNHPSIGGFLTH------CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKR 426 (482)
T ss_dssp TEEEESCCCHH-HHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCH
T ss_pred CEEEEeecCHH-HHhcCCCCCEEEec------CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCH
Confidence 78888977665 58877666 5532 6679999999999999997553 2444453 4457776652 378
Q ss_pred HHHHHHHHHHHhCcc
Q 001292 556 EGLSRAFSLFISNGK 570 (1106)
Q Consensus 556 eeLAeAI~~LLsDpe 570 (1106)
++++++|.++++|++
T Consensus 427 ~~l~~~i~~ll~~~~ 441 (482)
T 2pq6_A 427 EELAKLINEVIAGDK 441 (482)
T ss_dssp HHHHHHHHHHHTSHH
T ss_pred HHHHHHHHHHHcCCc
Confidence 999999999999885
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.27 Score=55.11 Aligned_cols=110 Identities=14% Similarity=0.274 Sum_probs=67.6
Q ss_pred HHHHHcCCCCCc-EEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHc
Q 001292 400 QLRKENGFLKDE-IVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRL 478 (1106)
Q Consensus 400 ~LR~~lGL~~d~-~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaekl 478 (1106)
.+..+.|+.++. .+++..|.....+ ....+...+.++.|.++ +++ ++++|...+. +..+++++..
T Consensus 174 ~~l~~~g~~~~~~~i~i~pga~~~~k--~wp~~~~~~l~~~l~~~---------g~~-vvl~g~~~e~--~~~~~i~~~~ 239 (349)
T 3tov_A 174 EFYSSHGLTDTDILIGFNIGSAVPEK--RWPAERFAHVADYFGRL---------GYK-TVFFGGPMDL--EMVQPVVEQM 239 (349)
T ss_dssp HHHHHTTCCTTCCEEEEECCCSSGGG--CCCHHHHHHHHHHHHHH---------TCE-EEECCCTTTH--HHHHHHHHTC
T ss_pred HHHHHcCCCCCCCEEEEeCCCCCccC--CCCHHHHHHHHHHHHhC---------CCe-EEEEeCcchH--HHHHHHHHhc
Confidence 344566776544 4556667544321 33445666666555431 234 3456654443 6667776655
Q ss_pred CCCCCcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec
Q 001292 479 GLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1106)
Q Consensus 479 GL~d~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS 532 (1106)
+-. .+.+.| ...++..+++.||++|..- + |..-+ |.|+|+|+|+-
T Consensus 240 ~~~--~~~l~g~~sl~e~~ali~~a~~~i~~D-----s-G~~Hl-Aaa~g~P~v~l 286 (349)
T 3tov_A 240 ETK--PIVATGKFQLGPLAAAMNRCNLLITND-----S-GPMHV-GISQGVPIVAL 286 (349)
T ss_dssp SSC--CEECTTCCCHHHHHHHHHTCSEEEEES-----S-HHHHH-HHTTTCCEEEE
T ss_pred ccc--cEEeeCCCCHHHHHHHHHhCCEEEECC-----C-CHHHH-HHhcCCCEEEE
Confidence 422 467777 4578999999999999652 2 34444 99999999986
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=96.44 E-value=0.031 Score=65.52 Aligned_cols=95 Identities=9% Similarity=-0.015 Sum_probs=64.9
Q ss_pred EEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCC----Cchhhh-ccCCeEEEEcC-----CC
Q 001292 485 VRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYV-AEGAQVIFFQK-----DN 554 (1106)
Q Consensus 485 V~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~g----GI~EiV-~Dg~nG~LV~~-----~D 554 (1106)
+++.++.... .+|+.+++.++-+. +.-++++||+++|+|+|+-... .....+ ..-..|+.++. -+
T Consensus 341 ~~v~~w~Pq~-~vL~h~~v~~fvtH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~ 415 (480)
T 2vch_A 341 FVIPFWAPQA-QVLAHPSTGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVR 415 (480)
T ss_dssp EEEESCCCHH-HHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCC
T ss_pred EEEeCccCHH-HHhCCCCcCeEEec----ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccC
Confidence 4455566554 89999996333332 6678999999999999997543 344554 45567776653 37
Q ss_pred HHHHHHHHHHHHh---CcccHHHHHHHHHHHHH
Q 001292 555 PEGLSRAFSLFIS---NGKLSKFARTVASAGRL 584 (1106)
Q Consensus 555 ~eeLAeAI~~LLs---DpelRk~r~~mGe~Are 584 (1106)
.++++++|.++++ +++.++.++++++.+++
T Consensus 416 ~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~ 448 (480)
T 2vch_A 416 REEVARVVKGLMEGEEGKGVRNKMKELKEAACR 448 (480)
T ss_dssp HHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH
Confidence 8999999999998 55555555555555444
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=95.96 E-value=0.0057 Score=65.38 Aligned_cols=73 Identities=16% Similarity=0.169 Sum_probs=53.0
Q ss_pred cEEEcCChhhHHHHHH-HcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCC--------chhhhccCCeEEEEcCCC
Q 001292 484 SVRHYGFNGDVNGVLL-MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI--------IKEYVAEGAQVIFFQKDN 554 (1106)
Q Consensus 484 rV~flG~~eDL~~Lya-aADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gG--------I~EiV~Dg~nG~LV~~~D 554 (1106)
+|...++.+++..+|+ .||++|.- +...+++|++++|+|.|.-..+. ..+.+.+...++++ +
T Consensus 115 ~v~v~~f~~~m~~~l~~~AdlvIsh------aGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~---~ 185 (224)
T 2jzc_A 115 KVIGFDFSTKMQSIIRDYSDLVISH------AGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC---A 185 (224)
T ss_dssp EEEECCSSSSHHHHHHHHCSCEEES------SCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE---C
T ss_pred eEEEeeccchHHHHHHhcCCEEEEC------CcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc---C
Confidence 5777889899999999 99999954 56789999999999999865542 13334333344444 4
Q ss_pred HHHHHHHHHHH
Q 001292 555 PEGLSRAFSLF 565 (1106)
Q Consensus 555 ~eeLAeAI~~L 565 (1106)
++.|+++|.++
T Consensus 186 ~~~L~~~i~~l 196 (224)
T 2jzc_A 186 PTETGLIAGLR 196 (224)
T ss_dssp SCTTTHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 56677777766
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.095 Score=64.47 Aligned_cols=224 Identities=11% Similarity=0.077 Sum_probs=126.3
Q ss_pred CCCcEEEEEcCCcccccchhh-----hhhhHHhHHHHHHHHhccccEEEecCCChhhh---hcCCCCCCEEEeCCCCCCc
Q 001292 315 HSIPLVWIIQEDSLANRLPVY-----VERGFQNLLSYWKSVFSRVNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADV 386 (1106)
Q Consensus 315 ~gIPVI~tIHna~Ls~r~~~Y-----~~~gleklis~~~~~l~~AD~VIa~S~~~~~~---~~gi~~~KI~VIpN~GVDl 386 (1106)
.+..+|-+.|+.+++.--... +..........+.......|++++++...... ..+++++++.+++..-.|.
T Consensus 435 ~~~~~iq~wHG~~lK~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~ 514 (729)
T 3l7i_A 435 ENQTYIQTWHGTPLKRLANDMKVVRMPGTTTPKYKRNFNRETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDV 514 (729)
T ss_dssp TTCEEEECCSSCCSBCCGGGCSCCCCTTCCHHHHHHHHHHHHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHH
T ss_pred CCcEEEECCCCCchhhccccccccccccccCHHHHHHHHHhhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHH
Confidence 456688888997654321110 00011222233334466789999998665444 3455556787776544554
Q ss_pred ccccccCc---chhHHHHHHHcCCCCCcEEEEEEcccCccc---ccc--CCHHHHHHHHHHhHHHHHhhccCCCCeEEEE
Q 001292 387 WAVEAYSK---SHEKYQLRKENGFLKDEIVVVVVGSSFFYN---ELS--WDYAVAMHDVGPLLIKYARRNSVEGSFKFVF 458 (1106)
Q Consensus 387 ~~~e~F~p---s~s~~~LR~~lGL~~d~~VIL~VGRl~~y~---kg~--Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLI 458 (1106)
.+.. ......+++.+++++++.+|+++-...... .+. .+...-++.+.+.+ . +++ .+
T Consensus 515 ----l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l-------~--~~~--~l 579 (729)
T 3l7i_A 515 ----LVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKEL-------G--DDY--VI 579 (729)
T ss_dssp ----HHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHH-------T--TTE--EE
T ss_pred ----HhcccchHHHHHHHHHHhCCCCCCeEEEEeeeeeCCccccccccccchhhHHHHHHHHc-------C--CCe--EE
Confidence 3311 123567889999999999999996432210 000 00111122222211 1 344 35
Q ss_pred EEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecC--CC-
Q 001292 459 LCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD--FP- 535 (1106)
Q Consensus 459 IVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD--~g- 535 (1106)
++=-||. +.......++.+ .+.......++.++|..||++|. -++-++.|++.+++|||... ..
T Consensus 580 i~r~Hp~-----~~~~~~~~~~~~-~~~~~~~~~di~~ll~~aD~lIT-------DySSv~fD~~~l~kPiif~~~D~~~ 646 (729)
T 3l7i_A 580 LLRMHYL-----ISNALDLSGYEN-FAIDVSNYNDVSELFLISDCLIT-------DYSSVMFDYGILKRPQFFFAYDIDK 646 (729)
T ss_dssp EECCCHH-----HHTTCCCTTCTT-TEEECTTCSCHHHHHHTCSEEEE-------SSCTHHHHHGGGCCCEEEECTTTTT
T ss_pred EEecCcc-----hhccccccccCC-cEEeCCCCcCHHHHHHHhCEEEe-------echHHHHhHHhhCCCEEEecCCHHH
Confidence 5555652 111111123344 66666666799999999999883 34678999999999999872 11
Q ss_pred ------CchhhhccCCeEEEEcCCCHHHHHHHHHHHHhC
Q 001292 536 ------IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 568 (1106)
Q Consensus 536 ------GI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsD 568 (1106)
|.---+.+..-|.++ .|.++|.++|......
T Consensus 647 Y~~~~rg~y~d~~~~~pg~~~--~~~~eL~~~i~~~~~~ 683 (729)
T 3l7i_A 647 YDKGLRGFYMNYMEDLPGPIY--TEPYGLAKELKNLDKV 683 (729)
T ss_dssp TTSSCCSBSSCTTSSSSSCEE--SSHHHHHHHHTTHHHH
T ss_pred HhhccCCcccChhHhCCCCeE--CCHHHHHHHHhhhhcc
Confidence 111011112234444 5899999999887653
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=94.37 E-value=0.21 Score=54.88 Aligned_cols=114 Identities=14% Similarity=0.112 Sum_probs=66.5
Q ss_pred HHHHHHHcCCCC-CcEEEEEEcc-cCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHH
Q 001292 398 KYQLRKENGFLK-DEIVVVVVGS-SFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVA 475 (1106)
Q Consensus 398 ~~~LR~~lGL~~-d~~VIL~VGR-l~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLa 475 (1106)
...+++.+++.. +..+++..|. ....+ ....+.+++.++.|.+ .+++ ++++|...+. +..+++.
T Consensus 167 ~~~~~~~~~~~~~~~~i~l~pga~~~~~k--~wp~~~~~~l~~~L~~---------~~~~-vvl~g~~~e~--~~~~~i~ 232 (348)
T 1psw_A 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAK--RWPHYHYAELAKQLID---------EGYQ-VVLFGSAKDH--EAGNEIL 232 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGG--SCCHHHHHHHHHHHHH---------TTCE-EEECCCGGGH--HHHHHHH
T ss_pred HHHHHHHhCCCCCCcEEEEECCCCccccC--CCCHHHHHHHHHHHHH---------CCCe-EEEEeChhhH--HHHHHHH
Confidence 455677788763 4456666675 22211 2334566666655542 1345 3555654443 5555555
Q ss_pred HHcCC--CCCcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec
Q 001292 476 SRLGL--LEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1106)
Q Consensus 476 eklGL--~d~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS 532 (1106)
+..+- ....+.+.| ...++..+++.||++|...+ |..-+ |+|+|+|+|+-
T Consensus 233 ~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~Ds------g~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 233 AALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS------GLMHV-AAALNRPLVAL 286 (348)
T ss_dssp TTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS------HHHHH-HHHTTCCEEEE
T ss_pred HhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecCC------HHHHH-HHHcCCCEEEE
Confidence 43220 111356677 35899999999999997632 23333 99999999985
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=88.32 E-value=1.5 Score=47.93 Aligned_cols=139 Identities=14% Similarity=0.054 Sum_probs=74.5
Q ss_pred cCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEE-cCCCCccHHHHHHHHHHcCCCCC
Q 001292 405 NGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLC-GNSTDGYNDALQEVASRLGLLEH 483 (1106)
Q Consensus 405 lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIV-G~GperY~eeLkeLaeklGL~d~ 483 (1106)
.+..++..+++..|.....+ ....+...+.++.|. . .++++ ++. |...+. +..+++++. ++
T Consensus 173 ~~~~~~~~i~l~pga~~~~k--~wp~~~~~~l~~~L~-------~--~~~~v-vl~~g~~~e~--~~~~~i~~~--~~-- 234 (326)
T 2gt1_A 173 LPTDAGEYAVFLHATTRDDK--HWPEEHWRELIGLLA-------D--SGIRI-KLPWGAPHEE--ERAKRLAEG--FA-- 234 (326)
T ss_dssp CCTTTTSEEEEECCCSSGGG--SCCHHHHHHHHHHTT-------T--TCCEE-EECCSSHHHH--HHHHHHHTT--CT--
T ss_pred ccccCCCEEEEEeCCCCccc--cCCHHHHHHHHHHHH-------H--CCCcE-EEecCCHHHH--HHHHHHHhh--CC--
Confidence 34444566777777544321 233445555554332 1 24553 444 532222 444555442 33
Q ss_pred cEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhc-cCCeEEEEc-------CC
Q 001292 484 SVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVA-EGAQVIFFQ-------KD 553 (1106)
Q Consensus 484 rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~-Dg~nG~LV~-------~~ 553 (1106)
.+.+.| ...++..+++.||++|..- + |..=+ |.|+|+|+|+-=-+..+.... -+.....+. .-
T Consensus 235 ~~~l~g~~sl~el~ali~~a~l~I~~D-----S-G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~cm~~I 307 (326)
T 2gt1_A 235 YVEVLPKMSLEGVARVLAGAKFVVSVD-----T-GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGNELSQL 307 (326)
T ss_dssp TEEECCCCCHHHHHHHHHTCSEEEEES-----S-HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGGCGGGC
T ss_pred cccccCCCCHHHHHHHHHhCCEEEecC-----C-cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcccccCC
Confidence 467777 4589999999999999662 2 34444 788999999852111111110 011111221 12
Q ss_pred CHHHHHHHHHHHHhC
Q 001292 554 NPEGLSRAFSLFISN 568 (1106)
Q Consensus 554 D~eeLAeAI~~LLsD 568 (1106)
++++..+++.++++.
T Consensus 308 ~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 308 TANAVKQFIEENAEK 322 (326)
T ss_dssp CHHHHHHHHHHTTTT
T ss_pred CHHHHHHHHHHHHHH
Confidence 577888888777764
|
| >1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1 | Back alignment and structure |
|---|
Probab=84.99 E-value=6 Score=36.14 Aligned_cols=108 Identities=13% Similarity=0.037 Sum_probs=75.7
Q ss_pred EEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHH---------cCeEEEccCCCCCCCcHHHHHHHH---
Q 001292 457 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM---------ADIVLYGSSQVEQGFPSLIVRAMT--- 524 (1106)
Q Consensus 457 LIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~Lyaa---------ADVfV~PS~~EeEGFGlvLLEAMA--- 524 (1106)
++|+.+.+.. ...++...+..|... .|.......+...++.. .|++++-.... +.-|..+++.+.
T Consensus 5 ilivdd~~~~-~~~l~~~L~~~~~~~-~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~-~~~g~~~~~~l~~~~ 81 (140)
T 1k68_A 5 IFLVEDNKAD-IRLIQEALANSTVPH-EVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNLP-KKDGREVLAEIKSDP 81 (140)
T ss_dssp EEEECCCHHH-HHHHHHHHHTCSSCC-EEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCS-SSCHHHHHHHHHHST
T ss_pred EEEEeCCHHH-HHHHHHHHHhcCCCc-eEEEECCHHHHHHHHHcccccccCCCCcEEEEecCCC-cccHHHHHHHHHcCc
Confidence 4566666543 577788888777653 57777777777777764 78988765543 245777777765
Q ss_pred --hCCCEEec-CCC---CchhhhccCCeEEEEcCCCHHHHHHHHHHHHh
Q 001292 525 --FGIPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 567 (1106)
Q Consensus 525 --~G~PVIAS-D~g---GI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLs 567 (1106)
..+|||+- ... ...+.+..|..+++..|-+.++|..+|..++.
T Consensus 82 ~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~ 130 (140)
T 1k68_A 82 TLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSANLSQLFQIVKGIEE 130 (140)
T ss_dssp TGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred ccccccEEEEecCCcHHHHHHHHHhchhheecCCCCHHHHHHHHHHHHH
Confidence 35788764 332 23455666889999999999999999998875
|
| >3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0 | Back alignment and structure |
|---|
Probab=83.65 E-value=5.7 Score=37.05 Aligned_cols=110 Identities=13% Similarity=0.103 Sum_probs=76.4
Q ss_pred eEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHH--cCeEEEccCCCCCCCcHHHHHHHHh-----C
Q 001292 454 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF-----G 526 (1106)
Q Consensus 454 ikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~Lyaa--ADVfV~PS~~EeEGFGlvLLEAMA~-----G 526 (1106)
.+ ++|+.+.+.. ...++.+.+..|... .|.......+....+.. .|++|+-.... +.-|..+++.+.. .
T Consensus 6 ~~-ILivdd~~~~-~~~l~~~L~~~~~~~-~v~~~~~~~~a~~~l~~~~~dlii~D~~l~-~~~g~~~~~~lr~~~~~~~ 81 (144)
T 3kht_A 6 KR-VLVVEDNPDD-IALIRRVLDRKDIHC-QLEFVDNGAKALYQVQQAKYDLIILDIGLP-IANGFEVMSAVRKPGANQH 81 (144)
T ss_dssp EE-EEEECCCHHH-HHHHHHHHHHTTCCE-EEEEESSHHHHHHHHTTCCCSEEEECTTCG-GGCHHHHHHHHHSSSTTTT
T ss_pred CE-EEEEeCCHHH-HHHHHHHHHhcCCCe-eEEEECCHHHHHHHhhcCCCCEEEEeCCCC-CCCHHHHHHHHHhcccccC
Confidence 35 5666666543 577788888777653 46666666666666654 58888765443 3457788887764 5
Q ss_pred CCEEec-CCC---CchhhhccCCeEEEEcCC-CHHHHHHHHHHHHh
Q 001292 527 IPVITP-DFP---IIKEYVAEGAQVIFFQKD-NPEGLSRAFSLFIS 567 (1106)
Q Consensus 527 ~PVIAS-D~g---GI~EiV~Dg~nG~LV~~~-D~eeLAeAI~~LLs 567 (1106)
+|||+- ... ...+.+..|..+++..+. +.++|.++|..+++
T Consensus 82 ~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~~i~~~l~ 127 (144)
T 3kht_A 82 TPIVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYGRIYAIFS 127 (144)
T ss_dssp CCEEEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHHHHHHHHHHH
Confidence 888864 222 233556678899999998 99999999998876
|
| >3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0 | Back alignment and structure |
|---|
Probab=83.50 E-value=6.3 Score=37.22 Aligned_cols=108 Identities=15% Similarity=0.107 Sum_probs=76.3
Q ss_pred EEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHH-----------HcCeEEEccCCCCCCCcHHHHHHHHh
Q 001292 457 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL-----------MADIVLYGSSQVEQGFPSLIVRAMTF 525 (1106)
Q Consensus 457 LIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~Lya-----------aADVfV~PS~~EeEGFGlvLLEAMA~ 525 (1106)
++|+.+.+.. ...++.+.+..|... .|.......+...++. ..|++|+-.... +.-|..+++.+..
T Consensus 7 ILivddd~~~-~~~l~~~L~~~g~~~-~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~-~~~g~~~~~~lr~ 83 (152)
T 3heb_A 7 IVMIEDDLGH-ARLIEKNIRRAGVNN-EIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLP-DMTGIDILKLVKE 83 (152)
T ss_dssp EEEECCCHHH-HHHHHHHHHHTTCCC-CEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCS-SSBHHHHHHHHHH
T ss_pred EEEEeCCHHH-HHHHHHHHHhCCCcc-eEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCCC-CCcHHHHHHHHHh
Confidence 5667666543 577888888888764 5777776667766663 478888765543 3557888887765
Q ss_pred -----CCCEEec-CCCC---chhhhccCCeEEEEcCCCHHHHHHHHHHHHh
Q 001292 526 -----GIPVITP-DFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 567 (1106)
Q Consensus 526 -----G~PVIAS-D~gG---I~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLs 567 (1106)
.+|||+- .... ..+.+..|..+++..|-++++|.++|.++..
T Consensus 84 ~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 134 (152)
T 3heb_A 84 NPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVNYENFANAIRQLGL 134 (152)
T ss_dssp STTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred cccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 5788764 3322 3455667889999999999999999988743
|
| >2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans} | Back alignment and structure |
|---|
Probab=83.23 E-value=8.1 Score=36.03 Aligned_cols=112 Identities=13% Similarity=0.066 Sum_probs=76.9
Q ss_pred CeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHH--cCeEEEccCCCCCCCcHHHHHHHHh-----
Q 001292 453 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF----- 525 (1106)
Q Consensus 453 dikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~Lyaa--ADVfV~PS~~EeEGFGlvLLEAMA~----- 525 (1106)
..+ ++|+.+.+.. ...++...+..|+ .|.......+...++.. .|++|+-.... +.-|..+++.+..
T Consensus 8 ~~~-iLivd~~~~~-~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~dlii~d~~l~-~~~g~~~~~~l~~~~~~~ 81 (147)
T 2zay_A 8 WWR-IMLVDTQLPA-LAASISALSQEGF---DIIQCGNAIEAVPVAVKTHPHLIITEANMP-KISGMDLFNSLKKNPQTA 81 (147)
T ss_dssp CEE-EEEECTTGGG-GHHHHHHHHHHTE---EEEEESSHHHHHHHHHHHCCSEEEEESCCS-SSCHHHHHHHHHTSTTTT
T ss_pred Cce-EEEEeCCHHH-HHHHHHHHHHcCC---eEEEeCCHHHHHHHHHcCCCCEEEEcCCCC-CCCHHHHHHHHHcCcccC
Confidence 345 5667776653 5788888887776 36666666666555544 78988765443 3457888888764
Q ss_pred CCCEEec-CCCC---chhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 001292 526 GIPVITP-DFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 570 (1106)
Q Consensus 526 G~PVIAS-D~gG---I~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpe 570 (1106)
.+|||+- .... ..+.+..|..+++..+-+.++|..+|..++....
T Consensus 82 ~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~i~~~~~~~~ 130 (147)
T 2zay_A 82 SIPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIRLSARIKRVLKLLY 130 (147)
T ss_dssp TSCEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 5788763 3332 2344566889999999999999999999886443
|
| >3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1} | Back alignment and structure |
|---|
Probab=82.05 E-value=11 Score=34.85 Aligned_cols=109 Identities=15% Similarity=0.070 Sum_probs=74.2
Q ss_pred CeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHH--cCeEEEccCCCCCCCcHHHHHHHHh-----
Q 001292 453 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF----- 525 (1106)
Q Consensus 453 dikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~Lyaa--ADVfV~PS~~EeEGFGlvLLEAMA~----- 525 (1106)
..+ ++|+.+.+.. ...++...+..|+ .|.......+...++.. .|++|+-.... +.-|..+++.+..
T Consensus 7 ~~~-iLivdd~~~~-~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~dlii~d~~l~-~~~g~~~~~~l~~~~~~~ 80 (142)
T 3cg4_A 7 KGD-VMIVDDDAHV-RIAVKTILSDAGF---HIISADSGGQCIDLLKKGFSGVVLLDIMMP-GMDGWDTIRAILDNSLEQ 80 (142)
T ss_dssp CCE-EEEECSCHHH-HHHHHHHHHHTTC---EEEEESSHHHHHHHHHTCCCEEEEEESCCS-SSCHHHHHHHHHHTTCCT
T ss_pred CCe-EEEEcCCHHH-HHHHHHHHHHCCe---EEEEeCCHHHHHHHHHhcCCCEEEEeCCCC-CCCHHHHHHHHHhhcccC
Confidence 345 5667666543 5777777777765 46666666666666654 57888755443 2457788888764
Q ss_pred CCCEEec-C---CCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHh
Q 001292 526 GIPVITP-D---FPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 567 (1106)
Q Consensus 526 G~PVIAS-D---~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLs 567 (1106)
.+|||+- + .....+.+..|..+++..+-+.++|..+|..++.
T Consensus 81 ~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 126 (142)
T 3cg4_A 81 GIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFDNEDLIEKTTFFMG 126 (142)
T ss_dssp TEEEEEEECTTCCCCSSTTGGGGEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHhcCccEEEeCCCCHHHHHHHHHHHHH
Confidence 4677753 2 2334456666778999999999999999998875
|
| >3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A | Back alignment and structure |
|---|
Probab=81.59 E-value=11 Score=34.64 Aligned_cols=108 Identities=13% Similarity=0.116 Sum_probs=73.2
Q ss_pred EEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHH---HcCeEEEccCCCCCCCcHHHHHHHHh-----CCC
Q 001292 457 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL---MADIVLYGSSQVEQGFPSLIVRAMTF-----GIP 528 (1106)
Q Consensus 457 LIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~Lya---aADVfV~PS~~EeEGFGlvLLEAMA~-----G~P 528 (1106)
++|+.+.+.. ...++.+.++.|.. .|.......+....+. ..|++++--... +.-|..+++.+.. .+|
T Consensus 8 iLivdd~~~~-~~~l~~~L~~~g~~--~v~~~~~~~~a~~~~~~~~~~dlvi~D~~~p-~~~g~~~~~~lr~~~~~~~~p 83 (129)
T 3h1g_A 8 LLVVDDSSTM-RRIIKNTLSRLGYE--DVLEAEHGVEAWEKLDANADTKVLITDWNMP-EMNGLDLVKKVRSDSRFKEIP 83 (129)
T ss_dssp EEEECSCHHH-HHHHHHHHHHTTCC--CEEEESSHHHHHHHHHHCTTCCEEEECSCCS-SSCHHHHHHHHHTSTTCTTCC
T ss_pred EEEEeCCHHH-HHHHHHHHHHcCCc--EEEEeCCHHHHHHHHHhCCCCCEEEEeCCCC-CCCHHHHHHHHHhcCCCCCCe
Confidence 4667776643 57788888888875 3655555545444442 368888654432 2457888888763 578
Q ss_pred EEec-CCCC---chhhhccCCeEEEEcCCCHHHHHHHHHHHHhC
Q 001292 529 VITP-DFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 568 (1106)
Q Consensus 529 VIAS-D~gG---I~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsD 568 (1106)
||+- .... ..+.+..|..+++..|-++++|..+|..++..
T Consensus 84 ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 84 IIMITAEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp EEEEESCCSHHHHHHHHHHTCCEEEESCCCHHHHHHHHHHHHCC
T ss_pred EEEEeCCCChHHHHHHHHcCccEEEeCCCCHHHHHHHHHHHhcc
Confidence 8764 3332 23556678899999999999999999998764
|
| >3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=80.59 E-value=8.7 Score=35.64 Aligned_cols=109 Identities=15% Similarity=0.035 Sum_probs=74.9
Q ss_pred EEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHH----HcCeEEEccCCCCCCCcHHHHHHHHh---CCCE
Q 001292 457 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL----MADIVLYGSSQVEQGFPSLIVRAMTF---GIPV 529 (1106)
Q Consensus 457 LIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~Lya----aADVfV~PS~~EeEGFGlvLLEAMA~---G~PV 529 (1106)
++|+.+.+.. ...++.+.+..|. .|.......+....+. ..|++|+-.... +.-|..+++.+.. .+||
T Consensus 6 ilivdd~~~~-~~~l~~~l~~~g~---~v~~~~~~~~a~~~~~~~~~~~dlvi~d~~l~-~~~g~~~~~~l~~~~~~~~i 80 (143)
T 3jte_A 6 ILVIDDESTI-LQNIKFLLEIDGN---EVLTASSSTEGLRIFTENCNSIDVVITDMKMP-KLSGMDILREIKKITPHMAV 80 (143)
T ss_dssp EEEECSCHHH-HHHHHHHHHHTTC---EEEEESSHHHHHHHHHHTTTTCCEEEEESCCS-SSCHHHHHHHHHHHCTTCEE
T ss_pred EEEEcCCHHH-HHHHHHHHHhCCc---eEEEeCCHHHHHHHHHhCCCCCCEEEEeCCCC-CCcHHHHHHHHHHhCCCCeE
Confidence 4667666543 5777888887764 4666666666666665 579988765543 3457777776543 5777
Q ss_pred Eec-CCCC---chhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 001292 530 ITP-DFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 570 (1106)
Q Consensus 530 IAS-D~gG---I~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpe 570 (1106)
|+- .... ..+.+..|..+++..+-+.++|..+|..++....
T Consensus 81 i~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~~~~~~~ 125 (143)
T 3jte_A 81 IILTGHGDLDNAILAMKEGAFEYLRKPVTAQDLSIAINNAINRKK 125 (143)
T ss_dssp EEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHhCcceeEeCCCCHHHHHHHHHHHHHHHH
Confidence 763 3332 4456777889999999999999999999987444
|
| >1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A | Back alignment and structure |
|---|
Probab=80.28 E-value=11 Score=35.50 Aligned_cols=109 Identities=17% Similarity=0.159 Sum_probs=71.6
Q ss_pred EEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHH--HcCeEEEccCCCCCCCcHHHHHHHH---hCCCEEe
Q 001292 457 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMT---FGIPVIT 531 (1106)
Q Consensus 457 LIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~Lya--aADVfV~PS~~EeEGFGlvLLEAMA---~G~PVIA 531 (1106)
++|+.+.+.. ...+.......|+ .|.......+....+. ..|++|+-.... +.-|..+++.+. ..+|||+
T Consensus 6 ILivdd~~~~-~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~dliild~~l~-~~~g~~~~~~l~~~~~~~pii~ 80 (155)
T 1qkk_A 6 VFLIDDDRDL-RKAMQQTLELAGF---TVSSFASATEALAGLSADFAGIVISDIRMP-GMDGLALFRKILALDPDLPMIL 80 (155)
T ss_dssp EEEECSCHHH-HHHHHHHHHHTTC---EEEEESCHHHHHHTCCTTCCSEEEEESCCS-SSCHHHHHHHHHHHCTTSCEEE
T ss_pred EEEEeCCHHH-HHHHHHHHHHcCc---EEEEECCHHHHHHHHHhCCCCEEEEeCCCC-CCCHHHHHHHHHhhCCCCCEEE
Confidence 4566666543 5677777777665 3555555555555443 368888765443 244667777664 3688876
Q ss_pred c-CCC---CchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 001292 532 P-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 570 (1106)
Q Consensus 532 S-D~g---GI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpe 570 (1106)
- +.. ...+.+..|..+++..|-++++|..+|..++....
T Consensus 81 ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~i~~~~~~~~ 123 (155)
T 1qkk_A 81 VTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEKRR 123 (155)
T ss_dssp EECGGGHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred EECCCChHHHHHHHhcCCCeEEeCCCCHHHHHHHHHHHHHHHH
Confidence 4 322 23455667889999999999999999999886433
|
| >1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1 | Back alignment and structure |
|---|
Probab=80.23 E-value=8.8 Score=35.50 Aligned_cols=108 Identities=12% Similarity=0.141 Sum_probs=75.3
Q ss_pred EEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHH------------HcCeEEEccCCCCCCCcHHHHHHHH
Q 001292 457 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL------------MADIVLYGSSQVEQGFPSLIVRAMT 524 (1106)
Q Consensus 457 LIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~Lya------------aADVfV~PS~~EeEGFGlvLLEAMA 524 (1106)
++|+.+.+.. ...++...+..|... .|.......+...++. ..|++|+-.... +.-|..+++.+.
T Consensus 9 iLivdd~~~~-~~~l~~~L~~~g~~~-~v~~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~-~~~g~~~~~~l~ 85 (149)
T 1k66_A 9 LLVVEDSDED-FSTFQRLLQREGVVN-PIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLP-GTDGREVLQEIK 85 (149)
T ss_dssp EEEECCCHHH-HHHHHHHHHHTTBCS-CEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCS-SSCHHHHHHHHT
T ss_pred EEEEECCHHH-HHHHHHHHHHcCCCc-eEEEECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCC-CCCHHHHHHHHH
Confidence 4566666543 577788888887753 5777777777776665 368988765543 245777788775
Q ss_pred -----hCCCEEec-CCC---CchhhhccCCeEEEEcCCCHHHHHHHHHHHHh
Q 001292 525 -----FGIPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 567 (1106)
Q Consensus 525 -----~G~PVIAS-D~g---GI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLs 567 (1106)
..+|||+- ... ...+.+..|..+++..+-+.++|..+|..++.
T Consensus 86 ~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~ 137 (149)
T 1k66_A 86 QDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLEIDRLTETVQTFIK 137 (149)
T ss_dssp TSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred hCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 45787764 332 23455667888999999999999999988865
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1106 | ||||
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 2e-04 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 5e-04 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 0.002 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 42.9 bits (99), Expect = 2e-04
Identities = 24/181 (13%), Positives = 50/181 (27%), Gaps = 5/181 (2%)
Query: 434 MHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGD 493
V LL +S + + F+ D + +
Sbjct: 262 QKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREF 321
Query: 494 VNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKD 553
V + D V+ S + F + + AM G I +++ + I +
Sbjct: 322 VRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPIASAVGGLRDIITNETG-ILVKAG 378
Query: 554 NPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDAL 613
+P L+ A + + + A + RY + ++ D +
Sbjct: 379 DPGELANAILKALELSR--SDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRAFDFI 436
Query: 614 L 614
L
Sbjct: 437 L 437
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 41.6 bits (96), Expect = 5e-04
Identities = 25/183 (13%), Positives = 49/183 (26%), Gaps = 15/183 (8%)
Query: 434 MHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGD 493
G L+ A V + V + G AL ASR V +
Sbjct: 301 TWQKGIDLMAEAVDEIVSLGGRLV-VLGAGDVALEGALLAAASRHHG---RVGVAIGYNE 356
Query: 494 VNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQV------ 547
L+ A + + A+ +G + + + V +
Sbjct: 357 PLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKA 416
Query: 548 ---IFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILEN 604
+ F +GL +A + K + G ++ YA +
Sbjct: 417 ATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGM--KSDVSWEKSAGLYAALYSQ 474
Query: 605 VLN 607
+++
Sbjct: 475 LIS 477
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 39.1 bits (89), Expect = 0.002
Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Query: 519 IVRAMTFGIPVITPDFPIIKEYVAEG-AQVIFFQKDNPEGLSRAFSLFISNGKLSKFART 577
++ A+T G+PV+T Y+A+ + + + E L+ ++ L
Sbjct: 286 LLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPL---RMA 342
Query: 578 VASAGRLHAKNMLALDCVTRYARILE 603
A R +A + A I+
Sbjct: 343 WAENARHYADTQDLYSLPEKAADIIT 368
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1106 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.98 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.98 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.98 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.87 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.79 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.79 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 98.99 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.72 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.52 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.45 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.39 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 98.07 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.06 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.76 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.72 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.29 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 95.85 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 95.61 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 95.41 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 94.78 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 85.75 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.98 E-value=1.4e-31 Score=307.89 Aligned_cols=349 Identities=11% Similarity=0.065 Sum_probs=241.8
Q ss_pred CEEEEEeCCCC----CChhHHHHHHHHHHHHHCCCEEEEEEcCC--------------------CC--------------
Q 001292 223 PRIGLILGNMA----KDSRSLLLITVVKNLQKLGYVFKIYAVRS--------------------GN-------------- 264 (1106)
Q Consensus 223 ~RIalVlg~L~----~gGesl~vv~LakaLqe~GyeVtV~t~~d--------------------g~-------------- 264 (1106)
|||++|+..+. .||..-.+..|+++|+++||+|+|+++.. +.
T Consensus 1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 80 (477)
T d1rzua_ 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (477)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhhhcccceEEEEEeccCCceEEEEEEEECCeeE
Confidence 68999987764 37867788899999999999999986311 00
Q ss_pred -----------------------chHHHHHH----hHHHH----HhhccCccEEEEccccHHHHHHHHHHHhhhhcccCC
Q 001292 265 -----------------------SHSLWEQI----AGQIS----ILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEP 313 (1106)
Q Consensus 265 -----------------------~~~i~r~l----g~lvk----iIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~ 313 (1106)
....+... ....+ .+...+||+||.|.+...+.........
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~-------- 152 (477)
T d1rzua_ 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAE-------- 152 (477)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSS--------
T ss_pred EEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhh--------
Confidence 00001100 01122 2334689999999877665554443221
Q ss_pred CCCCcEEEEEcCCcccccch------------hhhhhhH--HhHHHHHHHHhccccEEEecCCChhhh------------
Q 001292 314 FHSIPLVWIIQEDSLANRLP------------VYVERGF--QNLLSYWKSVFSRVNVIVFPDYTLPML------------ 367 (1106)
Q Consensus 314 ~~gIPVI~tIHna~Ls~r~~------------~Y~~~gl--eklis~~~~~l~~AD~VIa~S~~~~~~------------ 367 (1106)
..++|+|+|+|+........ .+..... ...+...+..+..+|.+++.+......
T Consensus 153 ~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~ 232 (477)
T d1rzua_ 153 TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEG 232 (477)
T ss_dssp SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHH
T ss_pred CCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhcCcchhh
Confidence 36799999999843221100 0000000 000011123456789988887543221
Q ss_pred hcCCCCCCEEEeCCCCCCcccccccCcc------------------hhHHHHHHHcCCCC-CcEEEEEEcccCccccccC
Q 001292 368 YSVLDAGNFFVIPGSPADVWAVEAYSKS------------------HEKYQLRKENGFLK-DEIVVVVVGSSFFYNELSW 428 (1106)
Q Consensus 368 ~~gi~~~KI~VIpN~GVDl~~~e~F~ps------------------~s~~~LR~~lGL~~-d~~VIL~VGRl~~y~kg~K 428 (1106)
.......++.+|+| |+|. +.|.|. .....++...++++ +.++|+++||+.+ +|
T Consensus 233 ~~~~~~~~~~vi~n-gv~~---~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~----~K 304 (477)
T d1rzua_ 233 VIGSRAHVLHGIVN-GIDA---DVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTW----QK 304 (477)
T ss_dssp HHHTTGGGEEECCC-CBCT---TTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBST----TT
T ss_pred hhhhccccEEEEEC-Ccch---hhccccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeee----cC
Confidence 11223457889998 7887 455431 12345666777754 4679999999998 99
Q ss_pred CHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEE
Q 001292 429 DYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLY 506 (1106)
Q Consensus 429 g~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~ 506 (1106)
|.+.+++|+..+.+ .+.+ ++++|.|+..+...+++++.. +.+ +|.+.+.. +.+..+|+.||++|+
T Consensus 305 G~~~Ll~a~~~~~~---------~~~~-l~~~G~G~~~~~~~~~~~~~~--~~~-~v~~~~~~~~~~~~~~~~~aD~~v~ 371 (477)
T d1rzua_ 305 GIDLMAEAVDEIVS---------LGGR-LVVLGAGDVALEGALLAAASR--HHG-RVGVAIGYNEPLSHLMQAGCDAIII 371 (477)
T ss_dssp THHHHHTTHHHHHH---------TTCE-EEEEECBCHHHHHHHHHHHHH--TTT-TEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred CcHHHHHHHHHHHh---------hCCe-EEEEecCCchHHHHHHHHHhh--cCC-eEEEEcccChhHHHHHHHhCccccC
Confidence 99999999988763 2445 578898886544555555554 444 78887733 557789999999999
Q ss_pred ccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCC---------eEEEEcCCCHHHHHHHHHHHHh---CcccHHH
Q 001292 507 GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGA---------QVIFFQKDNPEGLSRAFSLFIS---NGKLSKF 574 (1106)
Q Consensus 507 PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~---------nG~LV~~~D~eeLAeAI~~LLs---DpelRk~ 574 (1106)
||.+| +||++++||||||+|||+++.||++|+|.|+. +|+++++.|+++|+++|.++++ |+++
T Consensus 372 PS~~E--~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~--- 446 (477)
T d1rzua_ 372 PSRFE--PCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKL--- 446 (477)
T ss_dssp CCSCC--SSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHH---
T ss_pred Ccccc--CCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHH---
Confidence 99987 99999999999999999999999999998864 8999999999999999998776 6666
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 001292 575 ARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1106)
Q Consensus 575 r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk 607 (1106)
+++|+++|.+ +++.|+.++++|+++|+++++
T Consensus 447 ~~~~~~~a~~--~~fsw~~~a~~~~~lY~~ll~ 477 (477)
T d1rzua_ 447 WTQMQKLGMK--SDVSWEKSAGLYAALYSQLIS 477 (477)
T ss_dssp HHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHH--hhCCHHHHHHHHHHHHHHHhC
Confidence 5778887742 446678888899999999874
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=9.2e-31 Score=281.77 Aligned_cols=227 Identities=16% Similarity=0.196 Sum_probs=185.5
Q ss_pred cccEEEecCCChhh-h--hcCCCCCCEEEeCCCCCCcccccccCc---chhHHHHHHHcCCCCCcEEEEEEcccCccccc
Q 001292 353 RVNVIVFPDYTLPM-L--YSVLDAGNFFVIPGSPADVWAVEAYSK---SHEKYQLRKENGFLKDEIVVVVVGSSFFYNEL 426 (1106)
Q Consensus 353 ~AD~VIa~S~~~~~-~--~~gi~~~KI~VIpN~GVDl~~~e~F~p---s~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg 426 (1106)
.++.+++.+..... . ..+.+..++.+|+| |+|. +.+.+ ...+..+|..++++++.++++++|++.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~-gv~~---~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~---- 206 (370)
T d2iw1a1 135 KSTKLMMLTDKQIADFQKHYQTEPERFQILPP-GIYP---DRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFG---- 206 (370)
T ss_dssp CCCEEEESCHHHHHHHHHHHCCCGGGEEECCC-CCCG---GGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTT----
T ss_pred cCceEEEecHHHHHHHHHhcCCCcceEEEEEe-eccc---ccccccCchhhhhhhhhccCCCccceEEEEEecccc----
Confidence 45666665543322 2 45677888999998 7987 33322 2346778999999999999999999988
Q ss_pred cCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEE
Q 001292 427 SWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLY 506 (1106)
Q Consensus 427 ~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~ 506 (1106)
.||++.+++|++.|.++. ++..+ +++|.++.. +.++++++++++.+ +|+|+|+.+++.++|+.||++|+
T Consensus 207 ~Kg~~~li~a~~~l~~~~-------~~~~~-~ii~g~~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adv~v~ 275 (370)
T d2iw1a1 207 RKGVDRSIEALASLPESL-------RHNTL-LFVVGQDKP--RKFEALAEKLGVRS-NVHFFSGRNDVSELMAAADLLLH 275 (370)
T ss_dssp TTTHHHHHHHHHTSCHHH-------HHTEE-EEEESSSCC--HHHHHHHHHHTCGG-GEEEESCCSCHHHHHHHCSEEEE
T ss_pred ccchhhhccccccccccc-------cccee-eeccccccc--cccccccccccccc-ccccccccccccccccccccccc
Confidence 899999999998887654 33443 444444443 78899999999987 99999999999999999999999
Q ss_pred ccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEE-cCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH
Q 001292 507 GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFF-QKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLH 585 (1106)
Q Consensus 507 PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV-~~~D~eeLAeAI~~LLsDpelRk~r~~mGe~Are~ 585 (1106)
||..| +||++++||||||+|||+++.+|++|++.++.+|+++ ++.|+++|+++|.++++|+++ +++|+++|+++
T Consensus 276 ps~~E--~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~~~---~~~~~~~ar~~ 350 (370)
T d2iw1a1 276 PAYQE--AAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPL---RMAWAENARHY 350 (370)
T ss_dssp CCSCC--SSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHH---HHHHHHHHHHH
T ss_pred ccccc--cccceeeecccCCeeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHH
Confidence 99876 9999999999999999999999999999999999876 678999999999999999998 68999999999
Q ss_pred HHHhcHHHHHHHHHHHHH
Q 001292 586 AKNMLALDCVTRYARILE 603 (1106)
Q Consensus 586 ake~fsee~v~~Y~eLye 603 (1106)
++++.+....+++.++|+
T Consensus 351 ~~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 351 ADTQDLYSLPEKAADIIT 368 (370)
T ss_dssp HHHSCCSCHHHHHHHHHH
T ss_pred HHHhChhHHHHHHHHHHh
Confidence 987655555566666664
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.98 E-value=2.5e-30 Score=288.25 Aligned_cols=356 Identities=12% Similarity=0.094 Sum_probs=253.9
Q ss_pred CEEEEEeCCCCC---ChhHHHHHHHHHHHHHCCCEEEEEEcCCCC-----------------------------------
Q 001292 223 PRIGLILGNMAK---DSRSLLLITVVKNLQKLGYVFKIYAVRSGN----------------------------------- 264 (1106)
Q Consensus 223 ~RIalVlg~L~~---gGesl~vv~LakaLqe~GyeVtV~t~~dg~----------------------------------- 264 (1106)
||||+++..+.+ ||.+..+..|+++|+++||+|+|++.....
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGG 80 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEEEES
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecCCCccchhhccceeecccccceeeeeeccCCeEEEecCc
Confidence 689999977654 899999999999999999999999742110
Q ss_pred --------chH----HHHH--------HhHHHHHhh-ccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEE
Q 001292 265 --------SHS----LWEQ--------IAGQISILG-QEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWII 323 (1106)
Q Consensus 265 --------~~~----i~r~--------lg~lvkiIr-~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tI 323 (1106)
... ..+. ...+..+++ ...+|+||+|.+...++..+.++. .++|+|+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~----------~~~~~v~~~ 150 (437)
T d2bisa1 81 GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY----------FKIPAVFTI 150 (437)
T ss_dssp SGGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHH----------HCCCEEEEE
T ss_pred cccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhhhHhhhhhcc----------ccCceeEEE
Confidence 000 0000 000122222 246799999998888777666643 578999999
Q ss_pred cCCcccccchh-hhhhhHHh-----HHHHHHHHhccccEEEecCCChhhh---hcCCCCCCEEEeCCCCCCcccccccCc
Q 001292 324 QEDSLANRLPV-YVERGFQN-----LLSYWKSVFSRVNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSK 394 (1106)
Q Consensus 324 Hna~Ls~r~~~-Y~~~glek-----lis~~~~~l~~AD~VIa~S~~~~~~---~~gi~~~KI~VIpN~GVDl~~~e~F~p 394 (1106)
|+......... +...+..+ ...........+|.+++.+...... .......++.+|+| |+|. +.|.+
T Consensus 151 h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~-g~d~---~~~~~ 226 (437)
T d2bisa1 151 HRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFN-GIDC---SFWNE 226 (437)
T ss_dssp SSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCC-CCCT---TTSCG
T ss_pred eeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEEEec-cccc---ccccc
Confidence 99532211100 00000000 0001112345788888876543322 23445678999998 7987 44443
Q ss_pred c-------hhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCcc
Q 001292 395 S-------HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGY 467 (1106)
Q Consensus 395 s-------~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY 467 (1106)
. .....++..+++. +.++|+++|++.. ..|+.+.+++|+..+.. ....++++ |+++|.++..+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~---~~Kg~~~ll~a~~~~~~-----~~~~~~~~-lvi~G~~~~~~ 296 (437)
T d2bisa1 227 SYLTGSRDERKKSLLSKFGMD-EGVTFMFIGRFDR---GQKGVDVLLKAIEILSS-----KKEFQEMR-FIIIGKGDPEL 296 (437)
T ss_dssp GGCCSCHHHHHHHHHHHTTCC-SCEEEEEESCBCS---SSSCHHHHHHHHHHHTT-----SGGGGGEE-EEEECCBCHHH
T ss_pred cccchhhHHHHHhhhhhhhcc-CCceEEEeecccc---cchhHHHHHhhhccccc-----ccccccce-eeeeccccccc
Confidence 2 2345667788875 5679999998753 26899999999976642 12237888 68899988653
Q ss_pred HHHHHHHHHHcCCCCCcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCC
Q 001292 468 NDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGA 545 (1106)
Q Consensus 468 ~eeLkeLaeklGL~d~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~ 545 (1106)
...++.+.+ ...+ .+.+.| +.+++..+|+.||++++||..| ++|++++||||||+|||+++.||+.|++.+ .
T Consensus 297 ~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~adi~v~~s~~e--~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~ 370 (437)
T d2bisa1 297 EGWARSLEE--KHGN-VKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGAIPIASAVGGLRDIITN-E 370 (437)
T ss_dssp HHHHHHHHH--TCTT-EEEECSCCCHHHHHHHHTTCSEEEECCSCC--SSCHHHHHHHTTTCEEEEESCTTHHHHCCT-T
T ss_pred ccchhhhcc--cccc-ceeccccCcHHHHHHHHhhhcccccccccc--ccchHHHHHHHCCCCEEEeCCCCcHHhEEC-C
Confidence 444445444 3344 677777 4577999999999999999986 999999999999999999999999999876 5
Q ss_pred eEEEEcCCCHHHHHHHHHHHHh-CcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCC
Q 001292 546 QVIFFQKDNPEGLSRAFSLFIS-NGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSD 611 (1106)
Q Consensus 546 nG~LV~~~D~eeLAeAI~~LLs-DpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyeslLk~Ps~ 611 (1106)
+|+++++.|+++|+++|.++++ |++. +++|++++++.++++.|++++.+|.++|+++++.-.+
T Consensus 371 ~G~~~~~~d~~~la~~i~~ll~~~~~~---~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r~~~ 434 (437)
T d2bisa1 371 TGILVKAGDPGELANAILKALELSRSD---LSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRAFD 434 (437)
T ss_dssp TCEEECTTCHHHHHHHHHHHHTTTTSC---THHHHHHHHHHHHHSCHHHHHHHHHHHHHTCSCCBCT
T ss_pred cEEEECCCCHHHHHHHHHHHHhCCHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHhh
Confidence 8999999999999999999986 6666 6889999999998888888888999999998876444
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.87 E-value=4.5e-22 Score=202.94 Aligned_cols=174 Identities=13% Similarity=0.082 Sum_probs=140.7
Q ss_pred hHHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHH
Q 001292 397 EKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVAS 476 (1106)
Q Consensus 397 s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLae 476 (1106)
.+..+++++|++ +.++|+++||+.. .+||++.+++|++.|... ...++++ ++++|.++..+...++.+.+
T Consensus 19 ~~~~~~~~~~l~-~~~~il~~Grl~~---~~Kg~~~li~a~~~l~~~-----~~~~~~~-l~i~G~g~~~~~~~~~~~~~ 88 (196)
T d2bfwa1 19 RKKSLLSKFGMD-EGVTFMFIGRFDR---GQKGVDVLLKAIEILSSK-----KEFQEMR-FIIIGKGDPELEGWARSLEE 88 (196)
T ss_dssp HHHHHHHHTTCC-SCEEEEEESCBCS---SSSCHHHHHHHHHHHTTS-----GGGGGEE-EEEECCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-CCCEEEEEcCCCc---cccCHHHHHHHHHhhhcc-----cCCCCeE-EEEEeecccchhhhhhhhhh
Confidence 456778999994 7778999999752 279999999999877521 2237787 68889887553444555555
Q ss_pred HcCCCCCcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCC
Q 001292 477 RLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDN 554 (1106)
Q Consensus 477 klGL~d~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D 554 (1106)
. +.+ .+.+.| ..+++..+|+.||++|+||..| ++|.+++|||+||+|||+++.+++.+++.+ .+|++++++|
T Consensus 89 ~--~~~-~~~~~~~~~~~~l~~~~~~~di~v~ps~~e--~~~~~~~Eam~~G~pvI~~~~~~~~e~i~~-~~g~~~~~~~ 162 (196)
T d2bfwa1 89 K--HGN-VKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGD 162 (196)
T ss_dssp H--CTT-EEEECSCCCHHHHHHHHTTCSEEEECCSCC--SSCHHHHHHHHTTCEEEEESCHHHHHHCCT-TTCEEECTTC
T ss_pred c--cce-eEEeeeccccccchhccccccccccccccc--cccccchhhhhcCceeeecCCCccceeecC-CceeeECCCC
Confidence 4 343 566767 4468999999999999999886 999999999999999999999999998866 5899999999
Q ss_pred HHHHHHHHHHHHh-CcccHHHHHHHHHHHHHHHHHh
Q 001292 555 PEGLSRAFSLFIS-NGKLSKFARTVASAGRLHAKNM 589 (1106)
Q Consensus 555 ~eeLAeAI~~LLs-DpelRk~r~~mGe~Are~ake~ 589 (1106)
+++|+++|.++++ +++. +.+|+++|++.++++
T Consensus 163 ~~~l~~~i~~~l~~~~~~---~~~~~~~a~~~a~~f 195 (196)
T d2bfwa1 163 PGELANAILKALELSRSD---LSKFRENCKKRAMSF 195 (196)
T ss_dssp HHHHHHHHHHHHHCCHHH---HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCHHH---HHHHHHHHHHHHHhC
Confidence 9999999999988 4554 688999999998764
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.79 E-value=2.5e-19 Score=178.18 Aligned_cols=148 Identities=14% Similarity=0.128 Sum_probs=119.8
Q ss_pred EEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCc-cHHHHHHHHHHcCCCCCcEEEcCCh
Q 001292 413 VVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG-YNDALQEVASRLGLLEHSVRHYGFN 491 (1106)
Q Consensus 413 VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gper-Y~eeLkeLaeklGL~d~rV~flG~~ 491 (1106)
.++++||+.+ .||++.+++|++.+ ++.+ |+|+|.++.. +.+.+.+.+.+.. .+ +|+|+|..
T Consensus 14 ~~l~iGrl~~----~K~~~~~i~a~~~l-----------~~~~-l~ivg~~~~~~~~~~~~~~~~~~~-~~-~v~~~g~~ 75 (166)
T d2f9fa1 14 FWLSVNRIYP----EKRIELQLEVFKKL-----------QDEK-LYIVGWFSKGDHAERYARKIMKIA-PD-NVKFLGSV 75 (166)
T ss_dssp CEEEECCSSG----GGTHHHHHHHHHHC-----------TTSC-EEEEBCCCTTSTHHHHHHHHHHHS-CT-TEEEEESC
T ss_pred EEEEEecCcc----ccCHHHHHHHHHHh-----------cCCe-EEEEEecccccchhhhhhhhcccc-cC-cEEEeecc
Confidence 4779999988 89999999999655 3455 5678875542 3455555555544 34 89999965
Q ss_pred --hhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 001292 492 --GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 569 (1106)
Q Consensus 492 --eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDp 569 (1106)
+++..+|+.||++|+||..| +||++++|||++|+|||+++.++..|++.++.+|++++ .|+++++++|..+++|+
T Consensus 76 ~~~~~~~~~~~ad~~i~ps~~e--~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~-~d~~~~~~~i~~l~~~~ 152 (166)
T d2f9fa1 76 SEEELIDLYSRCKGLLCTAKDE--DFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVN-ADVNEIIDAMKKVSKNP 152 (166)
T ss_dssp CHHHHHHHHHHCSEEEECCSSC--CSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEEC-SCHHHHHHHHHHHHHCT
T ss_pred cccccccccccccccccccccc--cccccccccccccccceeecCCcceeeecCCcccccCC-CCHHHHHHHHHHHHhCH
Confidence 67999999999999999986 99999999999999999999999999999999999877 48999999999999998
Q ss_pred ccHHHHHHHHHHHH
Q 001292 570 KLSKFARTVASAGR 583 (1106)
Q Consensus 570 elRk~r~~mGe~Ar 583 (1106)
+.. ++.+.++|+
T Consensus 153 ~~~--~~~~~~~a~ 164 (166)
T d2f9fa1 153 DKF--KKDCFRRAK 164 (166)
T ss_dssp TTT--HHHHHHHHH
T ss_pred HHH--HHHHHHHHh
Confidence 742 334444443
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=3.4e-18 Score=197.21 Aligned_cols=283 Identities=11% Similarity=0.029 Sum_probs=196.8
Q ss_pred cEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcc-cccchhhhhhhHHhHHHHHHHHhccccEEEecCCC
Q 001292 285 SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSL-ANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYT 363 (1106)
Q Consensus 285 DiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~L-s~r~~~Y~~~gleklis~~~~~l~~AD~VIa~S~~ 363 (1106)
|+|+.|.|...++.....+.. ...++++..|..-- ...+...+. . ......+-.+|.|.+++..
T Consensus 124 d~iwvhDyhl~llp~~lR~~~---------~~~~i~~flH~pfP~~~~fr~lp~---~---~~il~~ll~~d~igf~~~~ 188 (456)
T d1uqta_ 124 DIIWIHDYHLLPFAHELRKRG---------VNNRIGFFLHIPFPTPEIFNALPT---Y---DTLLEQLCDYDLLGFQTEN 188 (456)
T ss_dssp CEEEEESGGGTTHHHHHHHTT---------CCSCEEEECCSCCCCHHHHTTSTT---H---HHHHHHHTTSSEEEESSHH
T ss_pred CeEEEeccchhhhHHHHHHhC---------CCCcEEEEeCCCCCChHHhccCcc---h---HHHHHHhhccccccccCHH
Confidence 688999998888776666542 56788888888311 110000000 1 1122334577888877644
Q ss_pred hhhh-------hcCC------------CCCCEEEeCCCCCCcccccccCcc------hhHHHHHHHcCCCCCcEEEEEEc
Q 001292 364 LPML-------YSVL------------DAGNFFVIPGSPADVWAVEAYSKS------HEKYQLRKENGFLKDEIVVVVVG 418 (1106)
Q Consensus 364 ~~~~-------~~gi------------~~~KI~VIpN~GVDl~~~e~F~ps------~s~~~LR~~lGL~~d~~VIL~VG 418 (1106)
.... ..+. ...++.++|. |+|. +.|... ....+++..+ .++++|+++|
T Consensus 189 ~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~-GID~---~~~~~~~~~~~~~~~~~l~~~~---~~~~~il~V~ 261 (456)
T d1uqta_ 189 DRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPI-GIEP---KEIAKQAAGPLPPKLAQLKAEL---KNVQNIFSVE 261 (456)
T ss_dssp HHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCC-CCCH---HHHHHHHHSCCCHHHHHHHHHT---TTCEEEEEEC
T ss_pred HHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecC-cccc---hhhhhhcccHHHHHHHHHHHhc---CCCeEEEEeC
Confidence 3221 0000 0124567775 8997 444321 1223444444 3788999999
Q ss_pred ccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCc-------cHHHHHHHHHH-------cCCCCCc
Q 001292 419 SSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG-------YNDALQEVASR-------LGLLEHS 484 (1106)
Q Consensus 419 Rl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~Gper-------Y~eeLkeLaek-------lGL~d~r 484 (1106)
|+.. .||...+++|+.+++++++... ..+. |+++|.+... +..++.+++.+ .+..+ .
T Consensus 262 Rld~----~KGi~~~l~A~~~~l~~~p~~~---~~v~-lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~-~ 332 (456)
T d1uqta_ 262 RLDY----SKGLPERFLAYEALLEKYPQHH---GKIR-YTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTP-L 332 (456)
T ss_dssp CBCG----GGCHHHHHHHHHHHHHHCGGGT---TTEE-EEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCS-E
T ss_pred CCch----hhchHHHHHHHHHHHHhCcccc---ccEE-EEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCc-e
Confidence 9998 8999999999999987664432 2444 5556554321 12333444433 24555 6
Q ss_pred EEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCC-----EEecCCCCchhhhccCCeEEEEcCCCHHH
Q 001292 485 VRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIP-----VITPDFPIIKEYVAEGAQVIFFQKDNPEG 557 (1106)
Q Consensus 485 V~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~P-----VIASD~gGI~EiV~Dg~nG~LV~~~D~ee 557 (1106)
|.+.+ +..++..+|+.||++++||..| |||++++||||||+| ||+|+++|+.+.+. .|++++|.|+++
T Consensus 333 v~~~~~~~~~~l~a~~~~Adv~v~~s~~E--G~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~---~g~lVnP~d~~~ 407 (456)
T d1uqta_ 333 YYLNQHFDRKLLMKIFRYSDVGLVTPLRD--GMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDE 407 (456)
T ss_dssp EEECSCCCHHHHHHHHHHCSEEEECCSSB--SCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTCHHH
T ss_pred eeccCCcCHHHHhHHHhhhceeecCCccC--CCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHhC---CeEEECcCCHHH
Confidence 77887 4578999999999999999997 999999999999999 99999999999994 389999999999
Q ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 001292 558 LSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENV 605 (1106)
Q Consensus 558 LAeAI~~LLsDpelRk~r~~mGe~Are~ake~fsee~v~~Y~eLyesl 605 (1106)
+|++|.++++++.. +++++++++++.+.++.....++.+..-++++
T Consensus 408 ~A~ai~~aL~~~~~--er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 408 VAAALDRALTMSLA--ERISRHAEMLDVIVKNDINHWQECFISDLKQI 453 (456)
T ss_dssp HHHHHHHHHTCCHH--HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCHH--HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhh
Confidence 99999999997763 36888999999999887777777877777764
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=98.99 E-value=3.1e-08 Score=105.39 Aligned_cols=294 Identities=12% Similarity=0.073 Sum_probs=155.7
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHCCCEEEEEEcCCCCchHH-------------------------------HHH
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSL-------------------------------WEQ 271 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~GyeVtV~t~~dg~~~~i-------------------------------~r~ 271 (1106)
+||++..+ +.||-......++++|+++||+|.+++..++..... +..
T Consensus 1 kkili~~~--GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (351)
T d1f0ka_ 1 KRLMVMAG--GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNA 78 (351)
T ss_dssp CEEEEECC--SSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHH
T ss_pred CEEEEEcC--CcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhcccccCCcEEEEECCCcCCCCHHHHHHHHHHHHHh
Confidence 57888765 334777778999999999999999987654321111 111
Q ss_pred HhHHHHHhhccCccEEEEccccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchhhhhhhHHhHHHHHHHHh
Q 001292 272 IAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVF 351 (1106)
Q Consensus 272 lg~lvkiIr~~~pDiIh~~~~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~Y~~~gleklis~~~~~l 351 (1106)
+.....++...+++++...............+ ..++|++...++.... . ..+ ...
T Consensus 79 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~----------~~~ip~~~~~~~~~~~----~---------~~~--~~~ 133 (351)
T d1f0ka_ 79 WRQARAIMKAYKPDVVLGMGGYVSGPGGLAAW----------SLGIPVVLHEQNGIAG----L---------TNK--WLA 133 (351)
T ss_dssp HHHHHHHHHHHCCSEEEECSSTTHHHHHHHHH----------HTTCCEEEEECSSSCC----H---------HHH--HHT
T ss_pred HHHHHHHhhccccceeeecccchhhhhhhhhh----------hcccceeecccccccc----h---------hHH--Hhh
Confidence 12234556666777665532222222222222 1568888776553211 0 001 122
Q ss_pred ccccEEEecCCChhhhhcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHH
Q 001292 352 SRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA 431 (1106)
Q Consensus 352 ~~AD~VIa~S~~~~~~~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~d 431 (1106)
..++.+....... ......+.+ ++.. ..+.... . +.......+..+++.+|... +..
T Consensus 134 ~~~~~~~~~~~~~--------~~~~~~~~~-~~~~---~~~~~~~-~---~~~~~~~~~~~~i~~~~gs~-------g~~ 190 (351)
T d1f0ka_ 134 KIATKVMQAFPGA--------FPNAEVVGN-PVRT---DVLALPL-P---QQRLAGREGPVRVLVVGGSQ-------GAR 190 (351)
T ss_dssp TTCSEEEESSTTS--------SSSCEECCC-CCCH---HHHTSCC-H---HHHHTTCCSSEEEEEECTTT-------CCH
T ss_pred hhcceeecccccc--------ccceeEEcC-Cccc---ccccchh-H---HhhhhcccCCcccccccccc-------hhh
Confidence 3444443332211 112233333 2221 1111111 1 12233444556666665321 222
Q ss_pred HHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCChhhHHHHHHHcCeEEEccCCC
Q 001292 432 VAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQV 511 (1106)
Q Consensus 432 lLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~eDL~~LyaaADVfV~PS~~E 511 (1106)
.+.+.+...+..... ... .++++..... ......... .... ++...++.+++.++|+.||++|.-
T Consensus 191 ~~~~~~~~~~~~l~~------~~~-~i~~~~~~~~-~~~~~~~~~--~~~~-~~~v~~f~~~~~~lm~~adl~It~---- 255 (351)
T d1f0ka_ 191 ILNQTMPQVAAKLGD------SVT-IWHQSGKGSQ-QSVEQAYAE--AGQP-QHKVTEFIDDMAAAYAWADVVVCR---- 255 (351)
T ss_dssp HHHHHHHHHHHHHGG------GEE-EEEECCTTCH-HHHHHHHHH--TTCT-TSEEESCCSCHHHHHHHCSEEEEC----
T ss_pred hhHHHHHHhhhhhcc------cce-eeeeccccch-hhhhhhhcc--cccc-cceeeeehhhHHHHHHhCchhhcc----
Confidence 233333333322211 112 3444444332 222222222 2333 688889999999999999999854
Q ss_pred CCCCcHHHHHHHHhCCCEEecCCC---C----chhhhccCCeEEEEcCC--CHHHHHHHHHHHHhCcccHHHHHHHHHHH
Q 001292 512 EQGFPSLIVRAMTFGIPVITPDFP---I----IKEYVAEGAQVIFFQKD--NPEGLSRAFSLFISNGKLSKFARTVASAG 582 (1106)
Q Consensus 512 eEGFGlvLLEAMA~G~PVIASD~g---G----I~EiV~Dg~nG~LV~~~--D~eeLAeAI~~LLsDpelRk~r~~mGe~A 582 (1106)
+++.++.||+++|+|+|+-..+ + ..+.+.+...|..++.. +++.+.++|..+ +++. +.+|++++
T Consensus 256 --~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l--~~~~---~~~~~~~~ 328 (351)
T d1f0ka_ 256 --SGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRET---LLTMAERA 328 (351)
T ss_dssp --CCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHHH---HHHHHHHH
T ss_pred --ccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEechhhCCHHHHHHHHHhh--CHHH---HHHHHHHH
Confidence 5568999999999999975432 1 34566666678776533 467888888775 3332 57788888
Q ss_pred HHHHHH
Q 001292 583 RLHAKN 588 (1106)
Q Consensus 583 re~ake 588 (1106)
++....
T Consensus 329 ~~~~~~ 334 (351)
T d1f0ka_ 329 RAASIP 334 (351)
T ss_dssp HHTCCT
T ss_pred HccCCc
Confidence 765443
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.72 E-value=6.1e-07 Score=96.04 Aligned_cols=83 Identities=16% Similarity=0.059 Sum_probs=65.5
Q ss_pred CCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCC--------chhhhccCCeEEEEc
Q 001292 480 LLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI--------IKEYVAEGAQVIFFQ 551 (1106)
Q Consensus 480 L~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gG--------I~EiV~Dg~nG~LV~ 551 (1106)
..+ +|.+.|+. +...+|..+|++|.. +...+++|||++|+|+|+....+ +.+.+.+...|..++
T Consensus 268 ~~~-~v~i~~~~-p~~~ll~~a~~~v~h------gG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~ 339 (391)
T d1pn3a_ 268 DGA-DCFVVGEV-NLQELFGRVAAAIHH------DSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVD 339 (391)
T ss_dssp CCT-TCCEESSC-CHHHHHTTSSCEEEE------SCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEEC
T ss_pred CCC-CEEEeccc-CHHHHHhhccEEEec------CchHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcC
Confidence 344 89999987 467889999999966 44579999999999999975433 456676666898887
Q ss_pred CCC--HHHHHHHHHHHHhCccc
Q 001292 552 KDN--PEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 552 ~~D--~eeLAeAI~~LLsDpel 571 (1106)
..+ +++|+++|.+++++ +.
T Consensus 340 ~~~~~~~~l~~~i~~~l~~-~~ 360 (391)
T d1pn3a_ 340 GPVPTIDSLSAALDTALAP-EI 360 (391)
T ss_dssp CSSCCHHHHHHHHHHHTST-TH
T ss_pred cCCCCHHHHHHHHHHHhCH-HH
Confidence 654 89999999999964 44
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.52 E-value=5.6e-06 Score=88.64 Aligned_cols=84 Identities=13% Similarity=0.024 Sum_probs=66.8
Q ss_pred CCCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCC----chhhhccCCeEEEEcCC-
Q 001292 479 GLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVAEGAQVIFFQKD- 553 (1106)
Q Consensus 479 GL~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gG----I~EiV~Dg~nG~LV~~~- 553 (1106)
.+++ +|++.++. ....+|..+|++|.- |+..++.||+++|+|+|+....+ +.+.+++...|+.++..
T Consensus 283 ~~~~-~v~~~~~~-p~~~ll~~~~~~I~h------gG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~ 354 (401)
T d1rrva_ 283 DDRD-DCFAIDEV-NFQALFRRVAAVIHH------GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPT 354 (401)
T ss_dssp CCCT-TEEEESSC-CHHHHGGGSSEEEEC------CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSC
T ss_pred cCCC-CEEEEecc-CcHHHhhhccEEEec------CCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCC
Confidence 3455 89999987 467788999999953 67799999999999999875554 56666666689888775
Q ss_pred -CHHHHHHHHHHHHhCccc
Q 001292 554 -NPEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 554 -D~eeLAeAI~~LLsDpel 571 (1106)
+++.|+++|.++++ ++.
T Consensus 355 ~~~~~L~~ai~~vl~-~~~ 372 (401)
T d1rrva_ 355 PTFESLSAALTTVLA-PET 372 (401)
T ss_dssp CCHHHHHHHHHHHTS-HHH
T ss_pred CCHHHHHHHHHHHhC-HHH
Confidence 48999999999995 444
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.45 E-value=6.8e-06 Score=87.38 Aligned_cols=82 Identities=16% Similarity=-0.034 Sum_probs=65.3
Q ss_pred CCCCcEEEcCChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCC----CchhhhccCCeEEEEcCC--
Q 001292 480 LLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEGAQVIFFQKD-- 553 (1106)
Q Consensus 480 L~d~rV~flG~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~g----GI~EiV~Dg~nG~LV~~~-- 553 (1106)
+++ +|++.++.. ...+|..+|++|.- |+..++.||+++|+|+|+-... ...+.+.+...|..++..
T Consensus 283 ~~~-nv~~~~~~p-~~~~l~~~~~~V~h------gG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~ 354 (401)
T d1iira_ 283 DGA-DCFAIGEVN-HQVLFGRVAAVIHH------GGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354 (401)
T ss_dssp CGG-GEEECSSCC-HHHHGGGSSEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred CCC-CEEEEeccC-HHHHHhhcCEEEec------CCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCCC
Confidence 444 899999874 57789999999943 7789999999999999996433 355666666688887665
Q ss_pred CHHHHHHHHHHHHhCc
Q 001292 554 NPEGLSRAFSLFISNG 569 (1106)
Q Consensus 554 D~eeLAeAI~~LLsDp 569 (1106)
++++|+++|.++++++
T Consensus 355 ~~~~l~~ai~~~l~~~ 370 (401)
T d1iira_ 355 TFDSLSAALATALTPE 370 (401)
T ss_dssp CHHHHHHHHHHHTSHH
T ss_pred CHHHHHHHHHHHhCHH
Confidence 6999999999999643
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.39 E-value=2.9e-05 Score=85.79 Aligned_cols=296 Identities=12% Similarity=0.035 Sum_probs=171.7
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHHC-CCEEEEEEcCCCC--c-------------------------hHHHHHHhHH
Q 001292 224 RIGLILGNMAKDSRSLLLITVVKNLQKL-GYVFKIYAVRSGN--S-------------------------HSLWEQIAGQ 275 (1106)
Q Consensus 224 RIalVlg~L~~gGesl~vv~LakaLqe~-GyeVtV~t~~dg~--~-------------------------~~i~r~lg~l 275 (1106)
||++|+|. -++=..+.+++++|++. ++++.++.++.-. . ...-..+..+
T Consensus 4 kI~~v~Gt---R~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~d~~l~~~~~~~s~~~~~~~~~~~~ 80 (373)
T d1v4va_ 4 RVVLAFGT---RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQA 80 (373)
T ss_dssp EEEEEECS---HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHHH
T ss_pred eEEEEEEh---hHHHHHHHHHHHHHHhCCCCCEEEEEccCChhhhhCcchhcCCCccccCCCCCCCCCHHHHHHHHHHHH
Confidence 78888754 24556788899999875 7888777653210 0 0011111225
Q ss_pred HHHhhccCccEEEEccc-cHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchh-hhhhhHHhHHHHHHHHhcc
Q 001292 276 ISILGQEQYSLIDWSIF-DGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPV-YVERGFQNLLSYWKSVFSR 353 (1106)
Q Consensus 276 vkiIr~~~pDiIh~~~~-~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~-Y~~~gleklis~~~~~l~~ 353 (1106)
.+++...+||+|-.+.- ...+...+++.. .++|++. +|+...+..... .+ +...... .-+.
T Consensus 81 ~~~l~~~kPD~vlv~GDr~e~la~a~aa~~----------~~ipi~H-iegG~rsg~~~~~~~----de~~R~~--iskl 143 (373)
T d1v4va_ 81 ARALKEMGADYVLVHGDTLTTFAVAWAAFL----------EGIPVGH-VEAGLRSGNLKEPFP----EEANRRL--TDVL 143 (373)
T ss_dssp HHHHHHTTCSEEEEESSCHHHHHHHHHHHH----------TTCCEEE-ETCCCCCSCTTSSTT----HHHHHHH--HHHH
T ss_pred hhhhhhcCcccccccccCccchhHHHHHHH----------hhhhhee-ecccccccccccCcc----hhhhhhh--hccc
Confidence 56777788997766442 233444444432 6899775 466322211110 01 1111111 1235
Q ss_pred ccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCccccccCCHH
Q 001292 354 VNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA 431 (1106)
Q Consensus 354 AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~d 431 (1106)
+++.++.+...... ..|.++.++.++++.++|. +.. .....+.......+.++++..-+... .++..
T Consensus 144 s~~hf~~t~~~~~~L~~~Ge~~~~I~~vG~p~~D~-----i~~--~~~~~~~~~~~~~~~~~lvt~hr~~n----~~~~~ 212 (373)
T d1v4va_ 144 TDLDFAPTPLAKANLLKEGKREEGILVTGQTGVDA-----VLL--AAKLGRLPEGLPEGPYVTVTMHRREN----WPLLS 212 (373)
T ss_dssp CSEEEESSHHHHHHHHTTTCCGGGEEECCCHHHHH-----HHH--HHHHCCCCTTCCSSCEEEECCCCGGG----GGGHH
T ss_pred cceeeecchhhhhhhhhhcccccceeecccchhhH-----HHh--hhhhcccccccccccceeEEeccccc----cchHH
Confidence 77888887665544 6688888999999865653 110 01111112234456666666654322 34555
Q ss_pred HHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCeEEEccC
Q 001292 432 VAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSS 509 (1106)
Q Consensus 432 lLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADVfV~PS~ 509 (1106)
.+++++..+.+.. .++. ++...++.. ..-....+...... +|.++.+. .+...++..|++++--|
T Consensus 213 ~~~~~~~~~~~~~-------~~~~--~i~p~~~~~--~~~~~~~~~~~~~~-n~~~~~~l~~~~~l~ll~~s~~vignS- 279 (373)
T d1v4va_ 213 DLAQALKRVAEAF-------PHLT--FVYPVHLNP--VVREAVFPVLKGVR-NFVLLDPLEYGSMAALMRASLLLVTDS- 279 (373)
T ss_dssp HHHHHHHHHHHHC-------TTSE--EEEECCSCH--HHHHHHHHHHTTCT-TEEEECCCCHHHHHHHHHTEEEEEESC-
T ss_pred HHHHHHHHHhhhc-------ccce--eeeeecccc--cchhhhhhhhcccc-cceeeccchHHHHHHHhhhceeEeccc-
Confidence 5666665554322 4444 333443321 11122223333444 78888855 57778899998877444
Q ss_pred CCCCCCcHHHHHHHHhCCCEEec-CCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCccc
Q 001292 510 QVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 510 ~EeEGFGlvLLEAMA~G~PVIAS-D~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpel 571 (1106)
|..+.||.++|+|||.- +.+.-.+.+..+.+ .++. .|++++.++|..+++++..
T Consensus 280 ------ssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vlv~-~d~~~I~~~i~~~l~~~~~ 334 (373)
T d1v4va_ 280 ------GGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KLAG-TDPEGVYRVVKGLLENPEE 334 (373)
T ss_dssp ------HHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EECC-SCHHHHHHHHHHHHTCHHH
T ss_pred ------chhhhcchhhcCcEEEeCCCccCHHHHhcCee-EEcC-CCHHHHHHHHHHHHcCHHH
Confidence 46788999999999987 66766677766644 4444 5899999999999998876
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=98.07 E-value=0.0013 Score=70.85 Aligned_cols=98 Identities=13% Similarity=0.065 Sum_probs=68.0
Q ss_pred cEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec----CCCCchhhh-ccCCeEEEEcCC---
Q 001292 484 SVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP----DFPIIKEYV-AEGAQVIFFQKD--- 553 (1106)
Q Consensus 484 rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS----D~gGI~EiV-~Dg~nG~LV~~~--- 553 (1106)
++.+.. ++.++. .+..+|+||.- |+-.++.||+++|+|+|+. |...+...+ +....|+.++..
T Consensus 331 n~~v~~~~pq~~~l-~~p~~~~fItH------GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~ 403 (461)
T d2acva1 331 KGMICGWAPQVEVL-AHKAIGGFVSH------CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRK 403 (461)
T ss_dssp SEEEESSCCHHHHH-HSTTEEEEEEC------CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCT
T ss_pred CeEEEecCCHHHHH-hcccCCEEEec------CCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeeccccc
Confidence 455544 443333 56889999844 6678999999999999996 444455554 444678776542
Q ss_pred -----CHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHHHHH
Q 001292 554 -----NPEGLSRAFSLFISN-GKLSKFARTVASAGRLHAKN 588 (1106)
Q Consensus 554 -----D~eeLAeAI~~LLsD-pelRk~r~~mGe~Are~ake 588 (1106)
++++++++|.+++++ +..|+.++++++.+++-+++
T Consensus 404 ~~~~~t~~~l~~a~~~vl~~d~~~r~~a~~l~~~~r~a~~~ 444 (461)
T d2acva1 404 GSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVD 444 (461)
T ss_dssp TCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTST
T ss_pred cCCccCHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhcC
Confidence 689999999999975 55666666677666554433
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.06 E-value=8.8e-05 Score=81.92 Aligned_cols=301 Identities=11% Similarity=0.077 Sum_probs=160.8
Q ss_pred CCCEEEEEeCCCCCChhHHHHHHHHHHHHHC-CCEEEEEEcCCC--CchHHHH---------------------HHh---
Q 001292 221 RPPRIGLILGNMAKDSRSLLLITVVKNLQKL-GYVFKIYAVRSG--NSHSLWE---------------------QIA--- 273 (1106)
Q Consensus 221 r~~RIalVlg~L~~gGesl~vv~LakaLqe~-GyeVtV~t~~dg--~~~~i~r---------------------~lg--- 273 (1106)
+++||++|+|. -++=..+.+++++|++. ++++.++.++.. ....... .++
T Consensus 1 ~k~Ki~~v~Gt---R~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i 77 (377)
T d1o6ca_ 1 KKLKVMTVFGT---RPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAFHIKPDFDLNIMKERQTLAEITSNAL 77 (377)
T ss_dssp CCEEEEEEECS---HHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHH
T ss_pred CCceEEEEEEc---hHhHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHhhcCCCCceeeecCCCCCCHHHHHHHHH
Confidence 46789999854 34556678899999886 678777765321 1111111 111
Q ss_pred -HHHHHhhccCccEEEEccc-cHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccchh-hhhhhHHhHHHHHHHH
Q 001292 274 -GQISILGQEQYSLIDWSIF-DGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPV-YVERGFQNLLSYWKSV 350 (1106)
Q Consensus 274 -~lvkiIr~~~pDiIh~~~~-~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~~-Y~~~gleklis~~~~~ 350 (1106)
.+.+++...+||++-++.- ...+...+++.. .++|++. +|+...+..... .+ +... +.+
T Consensus 78 ~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~----------~~Ipi~H-iegG~~s~~~~~~~~----de~~---R~~ 139 (377)
T d1o6ca_ 78 VRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFY----------HQIAVGH-VEAGLRTGNKYSPFP----EELN---RQM 139 (377)
T ss_dssp HHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHH----------TTCEEEE-ESCCCCCSCTTTTTT----HHHH---HHH
T ss_pred HhhhhhhhhcccceeEeeecccccchhhhhhhh----------ccceEEE-EecccccccccccCc----hhhh---ccc
Confidence 1456677788997766543 333444555532 6899764 566433321110 01 1111 122
Q ss_pred h-ccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEcccCcccccc
Q 001292 351 F-SRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELS 427 (1106)
Q Consensus 351 l-~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~e~F~ps~s~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~ 427 (1106)
+ +.+|+.++++...... ..|.++.++.++++..+|... .+.......... ..+..+.++++.+-+... ..
T Consensus 140 iskls~~hf~~t~~~~~~L~~~G~~~~~I~~vG~~~~D~i~--~~~~~~~~~~~~--~~~~~~~~ilvt~Hr~~~---~~ 212 (377)
T d1o6ca_ 140 TGAIADLHFAPTGQAKDNLLKENKKADSIFVTGNTAIDALN--TTVRDGYSHPVL--DQVGEDKMILLTAHRREN---LG 212 (377)
T ss_dssp HHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHH--HHCCSSCCCSTT--TTTTTSEEEEECC----------
T ss_pred cccceeEEeecchhhhhhhhhhccccceEeeccchhHHHHH--HHHHHHHhhhhh--hhccCCceEEEEeccccc---cc
Confidence 2 4578888887665544 568888899999987677421 111100000000 112234444444433221 11
Q ss_pred CCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHH-HHcCCCCCcEEEcCCh--hhHHHHHHHcCeE
Q 001292 428 WDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVA-SRLGLLEHSVRHYGFN--GDVNGVLLMADIV 504 (1106)
Q Consensus 428 Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLa-eklGL~d~rV~flG~~--eDL~~LyaaADVf 504 (1106)
......+.++..+... ..++. ++...++.. ...... +.+...+ +|.+..+. .+...++..|+++
T Consensus 213 ~~~~~~~~~~~~~~~~-------~~~~~--~i~~~~~~~---~~~~~~~~~~~~~~-ni~~~~~l~~~~fl~llk~s~~v 279 (377)
T d1o6ca_ 213 EPMENMFKAIRRIVGE-------FEDVQ--VVYPVHLNP---VVREAAHKHFGDSD-RVHLIEPLEVIDFHNFAAKSHFI 279 (377)
T ss_dssp ---HHHHHHHHHHHHH-------CTTEE--EEEC----C---HHHHHHHHC--CCS-SEEECCCCCHHHHHHHHHHCSEE
T ss_pred cchHHHHHHHHhhccc-------ccccc--ccccccccc---ccchhhhhcccccc-ceEeccccchHHHHHHHhhhhee
Confidence 1122333333333221 13443 444444332 233333 3333444 89999965 5788999999998
Q ss_pred EEccCCCCCCCcHHHHHHHHhCCCEEec-CCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCccc
Q 001292 505 LYGSSQVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 505 V~PS~~EeEGFGlvLLEAMA~G~PVIAS-D~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpel 571 (1106)
+-=| |..+.||..+|+|+|.- +.+.-.+.+..+ +-++++ .|.+++.+++..+++++..
T Consensus 280 IgnS-------ss~i~Ea~~lg~P~Inir~~tERqe~~~~g-~nilv~-~~~~~I~~~i~~~l~~~~~ 338 (377)
T d1o6ca_ 280 LTDS-------GGVQEEAPSLGKPVLVLRDTTERPEGVEAG-TLKLAG-TDEENIYQLAKQLLTDPDE 338 (377)
T ss_dssp EEC---------CHHHHGGGGTCCEEEECSCCC---CTTTT-SSEEEC-SCHHHHHHHHHHHHHCHHH
T ss_pred eccc-------chhHHhhhhhhceEEEeCCCCcCcchhhcC-eeEECC-CCHHHHHHHHHHHHhChHH
Confidence 8433 23478999999999986 334455656555 445665 4889999999999998875
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.76 E-value=0.0035 Score=68.87 Aligned_cols=305 Identities=13% Similarity=0.107 Sum_probs=169.0
Q ss_pred CEEEEEeCCCCCChhHHHHHHHHHHHHHC-CCEEEEEEcCCC--CchHHHH-------------------------HHhH
Q 001292 223 PRIGLILGNMAKDSRSLLLITVVKNLQKL-GYVFKIYAVRSG--NSHSLWE-------------------------QIAG 274 (1106)
Q Consensus 223 ~RIalVlg~L~~gGesl~vv~LakaLqe~-GyeVtV~t~~dg--~~~~i~r-------------------------~lg~ 274 (1106)
+||++|+|. -++=..+.+++++|++. +.++.++.++.. ......+ .+..
T Consensus 1 MKi~~v~Gt---R~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 77 (376)
T d1f6da_ 1 MKVLTVFGT---RPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEG 77 (376)
T ss_dssp CEEEEEECS---HHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTCCCSEECCCCSSSSCHHHHHHHHHHH
T ss_pred CeEEEEEEh---hHhHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHhcCCCCCcccccCCCCCCHHHHHHHHHHh
Confidence 578888754 34556778999999887 688888865421 1111111 1112
Q ss_pred HHHHhhccCccEEEEcc-ccHHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccch-hhhhhhHHhHHHHHHHHh-
Q 001292 275 QISILGQEQYSLIDWSI-FDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLP-VYVERGFQNLLSYWKSVF- 351 (1106)
Q Consensus 275 lvkiIr~~~pDiIh~~~-~~~i~v~~La~k~~idII~te~~~gIPVI~tIHna~Ls~r~~-~Y~~~gleklis~~~~~l- 351 (1106)
+..++...+||++-++. -...+...++.. ..++|++. +|+...+.... ..+. .. .+.++
T Consensus 78 ~~~~~~~~kPD~v~v~GDr~e~la~a~aa~----------~~~ipi~H-iegG~~s~~~~~~~pd----e~---~R~~is 139 (376)
T d1f6da_ 78 LKPILAEFKPDVVLVHGDTTTTLATSLAAF----------YQRIPVGH-VEAGLRTGDLYSPWPE----EA---NRTLTG 139 (376)
T ss_dssp HHHHHHHHCCSEEEEETTCHHHHHHHHHHH----------TTTCCEEE-ESCCCCCSCTTSSTTH----HH---HHHHHH
T ss_pred hHHHHHhccCcceeeeccccchhhHHHHHH----------hhCceEEE-EecccccccccccCch----hh---hhhhhc
Confidence 45566677888776654 333444444442 37899774 57743332221 0111 11 12222
Q ss_pred ccccEEEecCCChhhh--hcCCCCCCEEEeCCCCCCcccc--cccCcc--hhHHHHHHHcCCCCCcEEEEEEcccCcccc
Q 001292 352 SRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAV--EAYSKS--HEKYQLRKENGFLKDEIVVVVVGSSFFYNE 425 (1106)
Q Consensus 352 ~~AD~VIa~S~~~~~~--~~gi~~~KI~VIpN~GVDl~~~--e~F~ps--~s~~~LR~~lGL~~d~~VIL~VGRl~~y~k 425 (1106)
+.+|+.++.+...... ..|.++.+++++++..+|.... ...... .....+.....+..+...++.. +.+...
T Consensus 140 kls~~hf~~~~~~~~~L~~~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt--~H~~~~ 217 (376)
T d1f6da_ 140 HLAMYHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVT--GHRRES 217 (376)
T ss_dssp HTCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEC--CCCBSS
T ss_pred cceeEEEeccHHHHhHHHhcCCCccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceEEEe--cccchh
Confidence 4677778777655544 6688889999999877764110 000000 0111111122233334344433 111111
Q ss_pred ccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHHcCCCCCcEEEcCCh--hhHHHHHHHcCe
Q 001292 426 LSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADI 503 (1106)
Q Consensus 426 g~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaeklGL~d~rV~flG~~--eDL~~LyaaADV 503 (1106)
..+....++.++..+... ..++. ++...++.. ..-....+.+...+ ++.+.++. .+...++..|++
T Consensus 218 ~~~~~~~i~~~l~~~~~~-------~~~~~--ii~p~~~~~--~~~~~~~~~~~~~~-ni~~~~~l~~~~fl~ll~~a~~ 285 (376)
T d1f6da_ 218 FGRGFEEICHALADIATT-------HQDIQ--IVYPVHLNP--NVREPVNRILGHVK-NVILIDPQEYLPFVWLMNHAWL 285 (376)
T ss_dssp CCHHHHHHHHHHHHHHHH-------CTTEE--EEEECCBCH--HHHHHHHHHHTTCT-TEEEECCCCHHHHHHHHHHCSE
T ss_pred hhhhHHHHHHHHhhhhhh-------cceeE--Eecccccch--hhhhhHhhhhcccc-cceeeccccHHHHHHHHhhceE
Confidence 122334455555444321 13443 455555432 22222223334444 79998855 567789999999
Q ss_pred EEEccCCCCCCCcHHHHHHHHhCCCEEec-CCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCccc
Q 001292 504 VLYGSSQVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 504 fV~PS~~EeEGFGlvLLEAMA~G~PVIAS-D~gGI~EiV~Dg~nG~LV~~~D~eeLAeAI~~LLsDpel 571 (1106)
++--| |..+.||-.+|+|||.- +...-++-+..+ +-+++. .|.+++.++|.++++++..
T Consensus 286 vignS-------ssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~-~~~~~I~~ai~~~l~~~~~ 345 (376)
T d1f6da_ 286 ILTDS-------GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVG-TDKQRIVEEVTRLLKDENE 345 (376)
T ss_dssp EEESS-------SGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECC-SSHHHHHHHHHHHHHCHHH
T ss_pred EEecC-------cchHhhHHHhCCCEEEcCCCccCccceecC-eeEECC-CCHHHHHHHHHHHHhChHh
Confidence 88544 34577999999999975 333455666554 445555 5899999999999988764
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.72 E-value=0.0061 Score=65.58 Aligned_cols=80 Identities=15% Similarity=0.095 Sum_probs=60.1
Q ss_pred cEEEcCChhhHHHHH--HHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCC----CCchhhh-ccCCeEEEEcCC-CH
Q 001292 484 SVRHYGFNGDVNGVL--LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYV-AEGAQVIFFQKD-NP 555 (1106)
Q Consensus 484 rV~flG~~eDL~~Ly--aaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~----gGI~EiV-~Dg~nG~LV~~~-D~ 555 (1106)
||++..... ...+| ..+++||.- |+..++.||+.+|+|+|+..+ ..+...| +....|..++.. +.
T Consensus 347 Nv~~~~~~P-q~~lL~hp~~~~fItH------GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~ 419 (473)
T d2pq6a1 347 RGLIASWCP-QDKVLNHPSIGGFLTH------CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKR 419 (473)
T ss_dssp TEEEESCCC-HHHHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCH
T ss_pred ceEEeeeCC-HHHHhcCCcCcEEEec------CCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeCCCcCH
Confidence 788888653 33456 577888843 677999999999999999743 3455555 343578777643 79
Q ss_pred HHHHHHHHHHHhCcc
Q 001292 556 EGLSRAFSLFISNGK 570 (1106)
Q Consensus 556 eeLAeAI~~LLsDpe 570 (1106)
++|+++|.++++|+.
T Consensus 420 ~~l~~ai~~vl~d~~ 434 (473)
T d2pq6a1 420 EELAKLINEVIAGDK 434 (473)
T ss_dssp HHHHHHHHHHHTSHH
T ss_pred HHHHHHHHHHHcCCh
Confidence 999999999999986
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.29 E-value=0.0066 Score=65.52 Aligned_cols=81 Identities=15% Similarity=0.081 Sum_probs=60.3
Q ss_pred cEEEcCChhhHHHHH--HHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCC----Cchhhhcc-CCeEEEEcCC--C
Q 001292 484 SVRHYGFNGDVNGVL--LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAE-GAQVIFFQKD--N 554 (1106)
Q Consensus 484 rV~flG~~eDL~~Ly--aaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~g----GI~EiV~D-g~nG~LV~~~--D 554 (1106)
+|.+....... .++ ..+++||.- |+..++.||+.+|+|+|+-... .+...+.+ ...|..++.. +
T Consensus 320 nv~~~~~~pq~-~lL~hp~~~~fItH------GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~t 392 (450)
T d2c1xa1 320 YGMVVPWAPQA-EVLAHEAVGAFVTH------CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFT 392 (450)
T ss_dssp TEEEESCCCHH-HHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCC
T ss_pred cccccccCChH-hhhccCceeEEEcc------CCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCCCcC
Confidence 68877755333 344 667888744 6678999999999999987543 34555543 4688877654 7
Q ss_pred HHHHHHHHHHHHhCccc
Q 001292 555 PEGLSRAFSLFISNGKL 571 (1106)
Q Consensus 555 ~eeLAeAI~~LLsDpel 571 (1106)
+++|.++|.++|+|+..
T Consensus 393 ~~~l~~ai~~vL~d~~y 409 (450)
T d2c1xa1 393 KSGLMSCFDQILSQEKG 409 (450)
T ss_dssp HHHHHHHHHHHHHSHHH
T ss_pred HHHHHHHHHHHhcCcHH
Confidence 89999999999999875
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=95.85 E-value=0.16 Score=52.82 Aligned_cols=116 Identities=14% Similarity=0.128 Sum_probs=66.3
Q ss_pred HHHHHHHcCCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhccCCCCeEEEEEEcCCCCccHHHHHHHHHH
Q 001292 398 KYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASR 477 (1106)
Q Consensus 398 ~~~LR~~lGL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~~~PdikfLIIVG~GperY~eeLkeLaek 477 (1106)
.......+++..+.++|++..............+..++..+.|.+ .+.+ ++++|...+. +..+++.+.
T Consensus 167 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~---------~~~~-ivl~g~~~e~--~~~~~~~~~ 234 (348)
T d1pswa_ 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID---------EGYQ-VVLFGSAKDH--EAGNEILAA 234 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH---------TTCE-EEECCCGGGH--HHHHHHHTT
T ss_pred HHHHHHHhccccCCCeEEeccccchhhccccchHHHhhhHHHHhh---------cCCc-cccccccchH--HHHHHHHHh
Confidence 444566777776666655443211100012344555555554442 1234 4566654443 444444432
Q ss_pred cCC--CCCcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEec
Q 001292 478 LGL--LEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1106)
Q Consensus 478 lGL--~d~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIAS 532 (1106)
... ....+.+.| ...++..++..||++|.+.+ ..+--|+|+|+|+|+-
T Consensus 235 ~~~~~~~~~~~l~g~~sl~el~~li~~a~l~I~~Dt-------g~~HlAaa~g~p~i~l 286 (348)
T d1pswa_ 235 LNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS-------GLMHVAAALNRPLVAL 286 (348)
T ss_dssp SCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS-------HHHHHHHHTTCCEEEE
T ss_pred hhcccccccccccCCccHHHHHHHHhcceeEeecCc-------cHHHHHHHcCCCEEEE
Confidence 211 111355666 55899999999999997643 4567899999999985
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.61 E-value=0.014 Score=62.80 Aligned_cols=95 Identities=12% Similarity=0.009 Sum_probs=67.2
Q ss_pred cEEEcCChhhHHHHH--HHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCC----CCchhhhcc-CCeEEEEcC----
Q 001292 484 SVRHYGFNGDVNGVL--LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYVAE-GAQVIFFQK---- 552 (1106)
Q Consensus 484 rV~flG~~eDL~~Ly--aaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~----gGI~EiV~D-g~nG~LV~~---- 552 (1106)
+|++.++.... .+| ..+++||.- |+.+++.||+.+|+|+|+... ......+.+ -..|+....
T Consensus 335 nv~~~~w~Pq~-~lL~hp~~~~fVtH------GG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~~~~ 407 (471)
T d2vcha1 335 GFVIPFWAPQA-QVLAHPSTGGFLTH------CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDG 407 (471)
T ss_dssp EEEEESCCCHH-HHHHSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTS
T ss_pred CeeecccCCHH-HHhcCccCCEEEec------CCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecCCCC
Confidence 79999976433 466 468888843 677999999999999999743 334554533 346765533
Q ss_pred -CCHHHHHHHHHHHHhCcc---cHHHHHHHHHHHHHH
Q 001292 553 -DNPEGLSRAFSLFISNGK---LSKFARTVASAGRLH 585 (1106)
Q Consensus 553 -~D~eeLAeAI~~LLsDpe---lRk~r~~mGe~Are~ 585 (1106)
-+.++|+++|.++++|++ .|+.++++++.+++-
T Consensus 408 ~~t~~~l~~ai~~vl~~~~~~~~r~ra~~l~e~~~~a 444 (471)
T d2vcha1 408 LVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRV 444 (471)
T ss_dssp CCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHH
Confidence 278999999999999976 555566666666543
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=95.41 E-value=0.12 Score=61.61 Aligned_cols=141 Identities=13% Similarity=0.006 Sum_probs=89.3
Q ss_pred CCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhc-cCCCCeEEEEEEcC-CCCc-cHHHHHHHHHHc----
Q 001292 406 GFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRN-SVEGSFKFVFLCGN-STDG-YNDALQEVASRL---- 478 (1106)
Q Consensus 406 GL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk-~~~PdikfLIIVG~-Gper-Y~eeLkeLaekl---- 478 (1106)
.+.++...++++-|+..|| ...+.+.-+-.+.....+.. ....... +|++|. +|.. ....+-+++.+.
T Consensus 545 ~ldp~~lfd~~arRfheYK----Rq~Ln~~~i~~ly~rlk~~~~~~~~P~q-~IFaGKAhP~d~~gK~iIk~I~~va~~i 619 (824)
T d2gj4a1 545 HINPNSLFDVQVKRIHEYK----RQLLNCLHVITLYNRIKKEPNKFVVPRT-VMIGGKAAPGYHMAKMIIKLITAIGDVV 619 (824)
T ss_dssp CCCTTSEEEEEESCCCGGG----THHHHHHHHHHHHHHHHHCTTSCCCCEE-EEEECCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcchhhhhheeechhhh----hhhhhHhhHHHHHHHhhhcccCCCCCeE-EEEeCCCCCccHHHHHHHHHHHHHHHHH
Confidence 4678999999998888855 44542322212222222221 1122445 688887 4442 122222222211
Q ss_pred CCCC-----CcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhcc--CCeEEE
Q 001292 479 GLLE-----HSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE--GAQVIF 549 (1106)
Q Consensus 479 GL~d-----~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~D--g~nG~L 549 (1106)
+... .+|.|+. .+.-...++.+|||-...|..--|.-|..=+-||..|.+.|++--|...|+.++ ++||++
T Consensus 620 n~dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~ 699 (824)
T d2gj4a1 620 NHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFI 699 (824)
T ss_dssp TTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEE
T ss_pred hcChhhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccEEE
Confidence 1110 1577877 345677899999999988765445889999999999999999988888887764 568888
Q ss_pred Ec
Q 001292 550 FQ 551 (1106)
Q Consensus 550 V~ 551 (1106)
+-
T Consensus 700 fG 701 (824)
T d2gj4a1 700 FG 701 (824)
T ss_dssp CS
T ss_pred eC
Confidence 74
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=94.78 E-value=0.33 Score=57.59 Aligned_cols=141 Identities=10% Similarity=-0.013 Sum_probs=92.3
Q ss_pred CCCCCcEEEEEEcccCccccccCCHHHHHHHHHHhHHHHHhhcc-CCCCeEEEEEEcC-CCCcc-HHHHH----HHHHHc
Q 001292 406 GFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNS-VEGSFKFVFLCGN-STDGY-NDALQ----EVASRL 478 (1106)
Q Consensus 406 GL~~d~~VIL~VGRl~~y~kg~Kg~dlLLeA~k~Ll~k~aklk~-~~PdikfLIIVG~-GperY-~eeLk----eLaekl 478 (1106)
.+.++.+.++++-|+..| |...+++.-...+...+..... ....++ +|++|. +|..+ ..++- ++++..
T Consensus 521 ~ldp~~LtigfaRRfa~Y----KR~~L~~~~i~~l~~~l~~~~~~~~~Pvq-~IfaGKAhP~d~~gK~iIk~I~~va~~i 595 (796)
T d1l5wa_ 521 EINPQAIFDIQIKRLHEY----KRQHLNLLHILALYKEIRENPQADRVPRV-FLFGAKAAPGYYLAKNIIFAINKVADVI 595 (796)
T ss_dssp CCCTTSEEEEEESCCCGG----GTHHHHHHHHHHHHHHHHTCTTCCCCCEE-EEEECCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred ccChhhccchhhhhhhhh----hcccchhhhHHHHHHHHhcCcccCCCceE-EEEcCCCCCchHHHHHHHHHHHHHHHHh
Confidence 366899999999888774 4666655444444433322111 112355 688887 45420 12222 222211
Q ss_pred CCC-C----CcEEEcC--ChhhHHHHHHHcCeEEEccCCCCCCCcHHHHHHHHhCCCEEecCCCCchhhhcc--CCeEEE
Q 001292 479 GLL-E----HSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE--GAQVIF 549 (1106)
Q Consensus 479 GL~-d----~rV~flG--~~eDL~~LyaaADVfV~PS~~EeEGFGlvLLEAMA~G~PVIASD~gGI~EiV~D--g~nG~L 549 (1106)
... . .+|.|+. .+.-...++..|||-+..+..--|..|.+-+-||..|.+.|++--|...|+.++ ++||++
T Consensus 596 n~dp~~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~ 675 (796)
T d1l5wa_ 596 NNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFI 675 (796)
T ss_dssp HTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEE
T ss_pred cCChhhccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHhcCccceEE
Confidence 111 0 1588887 345667899999999988765445899999999999999999998988887764 679998
Q ss_pred Ec
Q 001292 550 FQ 551 (1106)
Q Consensus 550 V~ 551 (1106)
+-
T Consensus 676 fG 677 (796)
T d1l5wa_ 676 FG 677 (796)
T ss_dssp CS
T ss_pred ec
Confidence 84
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