Citrus Sinensis ID: 001361
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1092 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FN03 | 440 | Ultraviolet-B receptor UV | no | no | 0.281 | 0.697 | 0.381 | 9e-49 | |
| Q15751 | 4861 | Probable E3 ubiquitin-pro | yes | no | 0.326 | 0.073 | 0.345 | 1e-47 | |
| Q4U2R1 | 4836 | E3 ubiquitin-protein liga | yes | no | 0.328 | 0.074 | 0.333 | 5e-47 | |
| O95714 | 4834 | E3 ubiquitin-protein liga | no | no | 0.328 | 0.074 | 0.330 | 5e-47 | |
| Q9VR91 | 4912 | Probable E3 ubiquitin-pro | yes | no | 0.307 | 0.068 | 0.338 | 8e-43 | |
| Q5GLZ8 | 1057 | Probable E3 ubiquitin-pro | no | no | 0.337 | 0.349 | 0.307 | 2e-39 | |
| Q5PQN1 | 1057 | Probable E3 ubiquitin-pro | no | no | 0.346 | 0.357 | 0.304 | 3e-39 | |
| Q6PAV2 | 1057 | Probable E3 ubiquitin-pro | no | no | 0.307 | 0.317 | 0.315 | 5e-39 | |
| Q15034 | 1050 | Probable E3 ubiquitin-pro | no | no | 0.297 | 0.309 | 0.327 | 3e-38 | |
| F2Z461 | 1003 | E3 ISG15--protein ligase | no | no | 0.292 | 0.318 | 0.306 | 4e-31 |
| >sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1 | Back alignment and function desciption |
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Score = 196 bits (498), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 175/325 (53%), Gaps = 18/325 (5%)
Query: 307 VQNIACGGRHAALVTKQG-EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 365
+ ++ CG H ++ G EV+SWG GRLGHG SD+ P I AL I ++ +ACG
Sbjct: 69 IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 366 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
+ H AVT+ G++ +WG N N G LG G+ +P+K+ EGI + V+ G HTA
Sbjct: 129 DSHCLAVTMEGEVQSWG-RNQN-GQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTA 185
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 485
VT G L+ +G G +G LG GDR P V S G + ACG HT +V
Sbjct: 186 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV------ 239
Query: 486 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 545
SG L+T+G G+LGHGD E L+P + AL Q+S G T+ALT+
Sbjct: 240 ------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTS 293
Query: 546 TGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 604
G +Y G +GQ+G + P +V + V+ ++CG H +T R V+ W
Sbjct: 294 DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAW 352
Query: 605 GKGANGRLGHGDTDDRNFPSLVEAL 629
G+G NG+LG G++ DRNFP ++EAL
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIEAL 377
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UV-B specific signaling component that acts as UV-B photoreceptor and plays a key role in establishing UV-protective responses in plants. Upon UV-B irradiation, UVR8 undergoes an immediate switch from homodimer to monomer, accumulates in the nucleus, interacts with the photomorphogenic repressor COP1 and regulates the expression of the transcription factor HY5 by associating with chromatin (through histone H2B binding) in the HY5 promoter region. UVR8 is involved in controlling aspects of leaf growth and morphogenesis in response to UV-B, is required for normal progression of endocycle and has a regulatory role in stomatal differentiation. Is required for plant circadian clock response to photomorphogenic UV-B light, partly through the transcriptional activation of responsive clock genes. Promotes photosynthetic efficiency at elevated levels of UV-B. Plays a role in mediating the effects of UV-B radiation on pathogen resistance by controlling the expression of the sinapate biosynthetic pathway. The two tryptophans, Trp-285 and Trp-233, serve collectively as the UV-B chromophore. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3 | Back alignment and function description |
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| >sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus GN=Herc4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1 | Back alignment and function description |
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| >sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1092 | ||||||
| 359479203 | 1107 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.979 | 0.763 | 0.0 | |
| 255544003 | 1096 | Ran GTPase binding protein, putative [Ri | 0.986 | 0.982 | 0.777 | 0.0 | |
| 255572207 | 1100 | Ran GTPase binding protein, putative [Ri | 0.998 | 0.990 | 0.771 | 0.0 | |
| 224105957 | 1104 | predicted protein [Populus trichocarpa] | 0.995 | 0.984 | 0.767 | 0.0 | |
| 224075844 | 1099 | predicted protein [Populus trichocarpa] | 0.986 | 0.979 | 0.754 | 0.0 | |
| 224055315 | 1109 | predicted protein [Populus trichocarpa] | 0.995 | 0.980 | 0.745 | 0.0 | |
| 356554129 | 1106 | PREDICTED: uncharacterized protein LOC10 | 0.997 | 0.984 | 0.754 | 0.0 | |
| 357493985 | 1124 | Lateral signaling target protein-like pr | 0.994 | 0.966 | 0.753 | 0.0 | |
| 356501403 | 1109 | PREDICTED: uncharacterized protein LOC10 | 0.998 | 0.982 | 0.752 | 0.0 | |
| 356567509 | 1106 | PREDICTED: uncharacterized protein LOC10 | 0.986 | 0.973 | 0.742 | 0.0 |
| >gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 1662 bits (4303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 844/1105 (76%), Positives = 946/1105 (85%), Gaps = 21/1105 (1%)
Query: 1 MATTGAAAAPVERDIELAITALKKGAHLLKYGRRGKPKFCPFRLANDESILIWISGKEEK 60
++ TGAA ERD E A+TALKKGA+LLKYGRRGKPKFCPFRL+NDES+LIW SGKEEK
Sbjct: 11 LSRTGAA----ERDTEQALTALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEK 66
Query: 61 HLKLSHVSRIIPGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKA 120
LKLSHVSRII GQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWF+GLKA
Sbjct: 67 LLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKA 126
Query: 121 LISRS-HYRKGRAESRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTS 179
LISR H+RK R ESRSD + S A SPR +T+RSSPL+SPFGS S QKDG D L LH+
Sbjct: 127 LISRGGHHRKWRTESRSDGIPSEANSPRTYTRRSSPLNSPFGSADSLQKDGGDHLRLHSP 186
Query: 180 YESPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFR 239
YESPPK+V++KA SD +LYA PPK PS+SA GSV+SLSSGGSD GH+K ++ D FR
Sbjct: 187 YESPPKSVMEKAFSDVILYAVPPKGFFPSDSASGSVHSLSSGGSDSVHGHMKAMTMDAFR 246
Query: 240 VSLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAV 299
VSLSSAVSSSSQGSGHDDGD+LGDVFIWGE TGDG+LGGG HR GS G+KMDS +PKA+
Sbjct: 247 VSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGSHRVGSCFGMKMDSLLPKAL 306
Query: 300 ESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV 359
ESAVVLDVQNIACGGRHAALVTKQGE+FSWGEE GGRLGHGVDSDV HPKLID+L N N+
Sbjct: 307 ESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNI 366
Query: 360 ELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC 419
ELVACGE+HTCAVTLSGD+YTWG NFGLLGHGNE+S W+PK++NGPLEGIHVSS+SC
Sbjct: 367 ELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 426
Query: 420 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
GPWHTAVVTS+GQLFTFGDGTFGVLGHGD SVS PREV+SLKG RTV +ACGVWHTAAV
Sbjct: 427 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAV 486
Query: 480 VEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSL 539
VE+MVG+ SSSNCSSGKLFTWGDGD+GRLGHGDKEA+LVPTCVAALV+PNFC+V+CGHSL
Sbjct: 487 VEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCRVACGHSL 546
Query: 540 TVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 599
TVALTT+GHVYTMGSPVYGQLG+P+A+GKLPTRVEGKL K+FVEEIACG YHVAVLTSRT
Sbjct: 547 TVALTTSGHVYTMGSPVYGQLGNPQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRT 606
Query: 600 EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQS 659
EVYTWGKGANGRLGHGDTDDRN P+LVEALKDKQVKSI CGT+FTA ICLHKWVSGVDQS
Sbjct: 607 EVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATICLHKWVSGVDQS 666
Query: 660 MCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKA 719
MCSGCR+PFNFKRKRHNCYNCGLV+CH+CSSKKS+KASMAPNPNKPYRVCDNCF KL KA
Sbjct: 667 MCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFSKLRKA 726
Query: 720 TETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNK 777
ET +SS S VSRRG NQG NE ++ E SRS VQ +SMESLK+ ES +SKRNK
Sbjct: 727 IETDASSQSAVSRRGVTNQGLNELIDKDEKLDSRSRVQLARFSSMESLKQAESRTSKRNK 786
Query: 778 KQEFNRTRGLPLPNGVSQ-GNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRR 836
K EFN +R P+PNG SQ G AL KS NPVFGS+KKFFSAS+PGSRI+SR TSP SRR
Sbjct: 787 KLEFNSSRVSPIPNGGSQWGGAL---KSLNPVFGSSKKFFSASVPGSRIVSRTTSPISRR 843
Query: 837 SSPPRATTPTPTLSGLASPKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELER 892
SPPRA TPTPTL GL SPKIVVDDAKRT S+EVIKLR QVE LTRK+QLQE+ELER
Sbjct: 844 PSPPRAATPTPTLEGLTSPKIVVDDAKRTNDSLSQEVIKLRVQVENLTRKAQLQEVELER 903
Query: 893 TTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNS-----NSFHSSP 947
TT+QLKEA+A+AGEETA+C+AAK+VIKSLTAQLKDMAE LPVGA RN+ S S+P
Sbjct: 904 TTKQLKEAIAIAGEETARCKAAKEVIKSLTAQLKDMAERLPVGAARNTKSPSFTSLGSNP 963
Query: 948 TPAWDVSSAAIEQPSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNK 1007
+ D+SS +I++ + +T Q NGSN +LSNGS +NRS H EAT +N
Sbjct: 964 ASS-DLSSLSIDRINGQITSQEPDLNGSNGQLLSNGSSTTNNRSSGHNRLGHLEATIRNG 1022
Query: 1008 NRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRA 1067
+RT ++E +EWVEQDE GVYITL +LPGG+KDLKRVRFSRK+FSEKQAEQWWA NRA
Sbjct: 1023 SRTKESEHRNDNEWVEQDEPGVYITLTSLPGGVKDLKRVRFSRKRFSEKQAEQWWAENRA 1082
Query: 1068 RVYQQYNVSMVDKSSVSIGREGLAH 1092
RV+++YNV M+DKSSV +G E LAH
Sbjct: 1083 RVHERYNVRMIDKSSVGVGSEDLAH 1107
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis] gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis] gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa] gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa] gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa] gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max] | Back alignment and taxonomy information |
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| >gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula] gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1092 | ||||||
| TAIR|locus:505006603 | 1075 | AT5G12350 "AT5G12350" [Arabido | 0.966 | 0.981 | 0.633 | 0.0 | |
| TAIR|locus:2025277 | 1103 | PRAF1 "AT1G76950" [Arabidopsis | 0.642 | 0.636 | 0.499 | 7.7e-254 | |
| TAIR|locus:2165770 | 1073 | AT5G42140 "AT5G42140" [Arabido | 0.520 | 0.529 | 0.537 | 7.7e-254 | |
| TAIR|locus:2086253 | 1045 | AT3G23270 "AT3G23270" [Arabido | 0.446 | 0.466 | 0.562 | 1.2e-217 | |
| TAIR|locus:2079147 | 954 | AT3G47660 "AT3G47660" [Arabido | 0.630 | 0.722 | 0.507 | 3.2e-199 | |
| TAIR|locus:2009739 | 1006 | AT1G65920 [Arabidopsis thalian | 0.405 | 0.440 | 0.501 | 3e-179 | |
| TAIR|locus:2163986 | 440 | UVR8 "UVB-RESISTANCE 8" [Arabi | 0.314 | 0.779 | 0.339 | 9.8e-46 | |
| UNIPROTKB|E1BW48 | 4841 | HERC2 "Uncharacterized protein | 0.372 | 0.084 | 0.312 | 4.7e-39 | |
| UNIPROTKB|E1C8K2 | 4841 | HERC2 "Uncharacterized protein | 0.372 | 0.084 | 0.312 | 4.7e-39 | |
| MGI|MGI:103234 | 4836 | Herc2 "hect (homologous to the | 0.371 | 0.083 | 0.312 | 6.1e-39 |
| TAIR|locus:505006603 AT5G12350 "AT5G12350" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 3488 (1232.9 bits), Expect = 0., P = 0.
Identities = 697/1101 (63%), Positives = 803/1101 (72%)
Query: 1 MATTGAAAAPVERDIELAITALKKGAHLLKYGRRGKPKFCPFRLANDESILIWISGKEEK 60
MA+ + A PVERDIE AI ALKKGA+LLKYGRRGKPKFCPFRL+NDE++LIW SG EEK
Sbjct: 7 MASDLSRAGPVERDIEQAIIALKKGAYLLKYGRRGKPKFCPFRLSNDETVLIWFSGNEEK 66
Query: 61 HLKLSHVSRIIPGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKA 120
HLKLSHVSRII GQRTPIFQRYPRPEKEYQSFSLIY++RSLD+ICKDKDEAEVWFTGLKA
Sbjct: 67 HLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYSERSLDVICKDKDEAEVWFTGLKA 126
Query: 121 LISRSHYRKGRAESRSDEVSSVATSPRAHTQRXXXXXXXXXXXXXXQKDGLDPLHLHTSY 180
LIS H R R ESRSD S A SPR +T+R QKDG + L +H+ +
Sbjct: 127 LISHCHQRNRRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNDSLQKDGSNHLRIHSPF 186
Query: 181 ESPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRV 240
ESPPKN LDKA SD LYA PPK PS+SA SV+S GGSD GH++G+ D FRV
Sbjct: 187 ESPPKNGLDKAFSDMALYAVPPKGFYPSDSATISVHS---GGSDSMHGHMRGMGMDAFRV 243
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 300
VFIWGE G+G+LGGG R GS +KMDS +PKA+E
Sbjct: 244 SMSSAVSSSSHGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALE 303
Query: 301 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 360
S +VLDVQNIACGG+HA LVTKQGE FSWGEE GRLGHGVDS++ PKLIDAL N+E
Sbjct: 304 STIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIE 363
Query: 361 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 420
LVACGE H+CAVTLSGD+YTWG + FG+LGHGNE+S W+PK++N LEGIHVSS++CG
Sbjct: 364 LVACGEFHSCAVTLSGDLYTWGKGD--FGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACG 421
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
P+HTAVVTSAGQLFTFGDGTFGVLGHGD+ SV PREVDSLKGLRTVRAACGVWHTAAVV
Sbjct: 422 PYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVV 481
Query: 481 EVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLT 540
EVMVG GKLFTW KE +LVPTCVAALVEPNFCQV+CGHSLT
Sbjct: 482 EVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLT 541
Query: 541 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
VALTT+GHVYTMGSPVYGQLG+ A+GK P RVEGKL K+FVEEIACG YHVAVLTSRTE
Sbjct: 542 VALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTE 601
Query: 601 VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 660
VYTWGKG+NGRLGHGD DDRN P+LVE+LKDKQVKSI CGT+FTAA+C+H+W SG+DQSM
Sbjct: 602 VYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSM 661
Query: 661 CSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKAT 720
CSGCR PF+FKRKRHNCYNCGLV+CH+C+SKKS+KA MAPNPNKPYRVCD CF KL K
Sbjct: 662 CSGCRQPFSFKRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYRVCDKCFNKLKKTM 721
Query: 721 EXXXXXXXXXXXXXXMNQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKK 778
E +NQG ++ ++ + F SRS Q + MES+++V+S K+NKK
Sbjct: 722 ETDPSSHSSLSRRGSINQG-SDPIDKDDKFDSRSDGQLARFSLMESMRQVDS-RHKKNKK 779
Query: 779 QEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMXXXXXXXXXXXX 838
EFN +R P+P+G SQ ALN +KS NPVFG++KKFFSAS+PGSRI+
Sbjct: 780 YEFNSSRVSPIPSGSSQRGALNIAKSFNPVFGASKKFFSASVPGSRIVSRATSPISRRPS 839
Query: 839 XXXXXXXXXXLSGLASPKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTT 894
LSGLA+PK VVDD KRT S+EV+KLR+QVE LTRK+QLQE+ELERTT
Sbjct: 840 PPRSTTPTPTLSGLATPKFVVDDTKRTNDNLSQEVVKLRSQVESLTRKAQLQEVELERTT 899
Query: 895 RQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVR------NSNSFHSSP- 947
+QLKEALA+ EET +C+AAK+VIKSLTAQLKDMAE LPVG+ R + NSF SSP
Sbjct: 900 KQLKEALAITNEETTRCKAAKEVIKSLTAQLKDMAERLPVGSARTVKSPPSLNSFGSSPG 959
Query: 948 -TPAWDVSSAAIEQPSSPLTFQGAIPXXXXXXXXXXXXDFGDNRSPSQTEASHCEATTKN 1006
+++ + A Q S P P FG+ EAT +
Sbjct: 960 RIDPFNILNQANSQESEPNGI--TTPMFSNGTMTPA---FGNG-----------EATNEA 1003
Query: 1007 KNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANR 1066
+N EWVEQDE GVYITL AL GG +DLKRVRFSRK+FSE QAEQWWA NR
Sbjct: 1004 RNEK---------EWVEQDEPGVYITLTALAGGARDLKRVRFSRKRFSEIQAEQWWADNR 1054
Query: 1067 ARVYQQYNVSMVDKSSVSIGR 1087
RVY+QYNV MVDK+S + R
Sbjct: 1055 GRVYEQYNVRMVDKASEDLPR 1075
|
|
| TAIR|locus:2025277 PRAF1 "AT1G76950" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2165770 AT5G42140 "AT5G42140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2086253 AT3G23270 "AT3G23270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2079147 AT3G47660 "AT3G47660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2009739 AT1G65920 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2163986 UVR8 "UVB-RESISTANCE 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BW48 HERC2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C8K2 HERC2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:103234 Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1092 | |||
| cd13365 | 115 | cd13365, PH_PLC_plant-like, Plant-like Phospholipa | 1e-52 | |
| COG5184 | 476 | COG5184, ATS1, Alpha-tubulin suppressor and relate | 1e-30 | |
| pfam08381 | 59 | pfam08381, BRX, Transcription factor regulating ro | 2e-30 | |
| COG5184 | 476 | COG5184, ATS1, Alpha-tubulin suppressor and relate | 1e-29 | |
| COG5184 | 476 | COG5184, ATS1, Alpha-tubulin suppressor and relate | 8e-29 | |
| cd01248 | 108 | cd01248, PH_PLC_ELMO1, Phospholipase C and Engulfm | 6e-25 | |
| pfam01363 | 68 | pfam01363, FYVE, FYVE zinc finger | 6e-22 | |
| smart00064 | 68 | smart00064, FYVE, Protein present in Fab1, YOTB, V | 7e-20 | |
| cd00065 | 57 | cd00065, FYVE, FYVE domain; Zinc-binding domain; t | 1e-18 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 9e-14 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 1e-13 | |
| pfam13713 | 39 | pfam13713, BRX_N, Transcription factor BRX N-termi | 2e-13 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 5e-12 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 5e-11 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 3e-09 | |
| cd13364 | 108 | cd13364, PH_PLC_eta, Phospholipase C-eta (PLC-eta) | 2e-08 | |
| cd13363 | 117 | cd13363, PH_PLC_delta, Phospholipase C-delta (PLC- | 8e-08 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 3e-07 | |
| pfam12718 | 143 | pfam12718, Tropomyosin_1, Tropomyosin like | 3e-05 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 2e-04 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 5e-04 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 7e-04 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 0.002 | |
| pfam00261 | 237 | pfam00261, Tropomyosin, Tropomyosin | 0.002 | |
| pfam12814 | 121 | pfam12814, Mcp5_PH, Meiotic cell cortex C-terminal | 0.002 |
| >gnl|CDD|241519 cd13365, PH_PLC_plant-like, Plant-like Phospholipase C (PLC) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
Score = 179 bits (455), Expect = 1e-52
Identities = 72/115 (62%), Positives = 86/115 (74%), Gaps = 4/115 (3%)
Query: 13 RDIELAITALKKGAHLLKYGRRGKPKFCPFRLANDESILIWISGKE--EKHLKLSHVSRI 70
RD+E AIT LK G++LLKYGRRGKP F FRL+ DE L W S K+ EK ++LS VSRI
Sbjct: 1 RDVEEAITQLKIGSNLLKYGRRGKPHFRYFRLSPDELTLYWSSPKKGSEKRVRLSSVSRI 60
Query: 71 IPGQRTPIFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFTGLKALIS 123
IPGQRT +F+R P P E QSFS+IY D RSLDL CKD+ E + WFTGL+AL+S
Sbjct: 61 IPGQRTVVFERPPPPGLEEQSFSIIYADGERSLDLTCKDRQEFDTWFTGLRALLS 115
|
PLC-gamma (PLCgamma) was the second class of PLC discovered. PLC-gamma consists of an N-terminal PH domain, a EF hand domain, a catalytic domain split into X and Y halves internal to which is a PH domain split by two SH2 domains and a single SH3 domain, and a C-terminal C2 domain. PLCs (EC 3.1.4.3) play a role in the initiation of cellular activation, proliferation, differentiation and apoptosis. They are central to inositol lipid signalling pathways, facilitating intracellular Ca2+ release and protein kinase C (PKC) activation. Specificaly, PLCs catalyze the cleavage of phosphatidylinositol-4,5-bisphosphate (PIP2) and result in the release of 1,2-diacylglycerol (DAG) and inositol 1,4,5-triphosphate (IP3). These products trigger the activation of protein kinase C (PKC) and the release of Ca2+ from intracellular stores. There are fourteen kinds of mammalian phospholipase C proteins which are are classified into six isotypes (beta, gamma, delta, epsilon, zeta, eta). This cd contains PLC members from fungi and plants. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 115 |
| >gnl|CDD|227511 COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|203924 pfam08381, BRX, Transcription factor regulating root and shoot growth via Pin3 | Back alignment and domain information |
|---|
| >gnl|CDD|227511 COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|227511 COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|241279 cd01248, PH_PLC_ELMO1, Phospholipase C and Engulfment and cell motility protein 1 pleckstrin homology domain | Back alignment and domain information |
|---|
| >gnl|CDD|216454 pfam01363, FYVE, FYVE zinc finger | Back alignment and domain information |
|---|
| >gnl|CDD|214499 smart00064, FYVE, Protein present in Fab1, YOTB, Vac1, and EEA1 | Back alignment and domain information |
|---|
| >gnl|CDD|238022 cd00065, FYVE, FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1; | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205888 pfam13713, BRX_N, Transcription factor BRX N-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|241518 cd13364, PH_PLC_eta, Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241517 cd13363, PH_PLC_delta, Phospholipase C-delta (PLC-delta) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205039 pfam12718, Tropomyosin_1, Tropomyosin like | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|189476 pfam00261, Tropomyosin, Tropomyosin | Back alignment and domain information |
|---|
| >gnl|CDD|221786 pfam12814, Mcp5_PH, Meiotic cell cortex C-terminal pleckstrin homology | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1092 | |||
| COG5184 | 476 | ATS1 Alpha-tubulin suppressor and related RCC1 dom | 100.0 | |
| KOG1427 | 443 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| COG5184 | 476 | ATS1 Alpha-tubulin suppressor and related RCC1 dom | 100.0 | |
| KOG1427 | 443 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| PF08381 | 59 | BRX: Transcription factor regulating root and shoo | 99.97 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 99.93 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 99.92 | |
| KOG1428 | 3738 | consensus Inhibitor of type V adenylyl cyclases/Ne | 99.85 | |
| cd01248 | 115 | PH_PLC Phospholipase C (PLC) pleckstrin homology ( | 99.81 | |
| KOG1428 | 3738 | consensus Inhibitor of type V adenylyl cyclases/Ne | 99.8 | |
| PF12814 | 123 | Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin | 99.7 | |
| PF13713 | 39 | BRX_N: Transcription factor BRX N-terminal domain | 99.37 | |
| KOG0169 | 746 | consensus Phosphoinositide-specific phospholipase | 99.28 | |
| PF01363 | 69 | FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc f | 99.18 | |
| KOG1818 | 634 | consensus Membrane trafficking and cell signaling | 99.11 | |
| PF00415 | 51 | RCC1: Regulator of chromosome condensation (RCC1) | 99.08 | |
| KOG0941 | 850 | consensus E3 ubiquitin protein ligase [Posttransla | 99.05 | |
| smart00064 | 68 | FYVE Protein present in Fab1, YOTB, Vac1, and EEA1 | 99.02 | |
| KOG1264 | 1267 | consensus Phospholipase C [Lipid transport and met | 98.97 | |
| PF00415 | 51 | RCC1: Regulator of chromosome condensation (RCC1) | 98.93 | |
| KOG1729 | 288 | consensus FYVE finger containing protein [General | 98.87 | |
| KOG1819 | 990 | consensus FYVE finger-containing proteins [General | 98.83 | |
| PTZ00303 | 1374 | phosphatidylinositol kinase; Provisional | 98.81 | |
| KOG0941 | 850 | consensus E3 ubiquitin protein ligase [Posttransla | 98.76 | |
| PF13540 | 30 | RCC1_2: Regulator of chromosome condensation (RCC1 | 98.71 | |
| PF13540 | 30 | RCC1_2: Regulator of chromosome condensation (RCC1 | 98.66 | |
| cd00065 | 57 | FYVE FYVE domain; Zinc-binding domain; targets pro | 98.55 | |
| KOG2999 | 713 | consensus Regulator of Rac1, required for phagocyt | 98.38 | |
| KOG1842 | 505 | consensus FYVE finger-containing protein [General | 98.19 | |
| KOG1841 | 1287 | consensus Smad anchor for receptor activation [Def | 98.03 | |
| cd01244 | 98 | PH_RasGAP_CG9209 RAS_GTPase activating protein (GA | 97.87 | |
| cd01235 | 101 | PH_SETbf Set binding factor Pleckstrin Homology (P | 97.69 | |
| KOG1409 | 404 | consensus Uncharacterized conserved protein, conta | 97.57 | |
| cd01236 | 104 | PH_outspread Outspread Pleckstrin homology (PH) do | 97.48 | |
| cd01238 | 106 | PH_Tec Tec pleckstrin homology (PH) domain. Tec pl | 97.47 | |
| cd01265 | 95 | PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | 97.36 | |
| KOG1843 | 473 | consensus Uncharacterized conserved protein [Funct | 97.31 | |
| cd01233 | 100 | Unc104 Unc-104 pleckstrin homology (PH) domain. Un | 97.27 | |
| cd01264 | 101 | PH_melted Melted pleckstrin homology (PH) domain. | 97.27 | |
| PF00169 | 104 | PH: PH domain; InterPro: IPR001849 The pleckstrin | 97.17 | |
| smart00233 | 102 | PH Pleckstrin homology domain. Domain commonly fou | 97.16 | |
| cd01266 | 108 | PH_Gab Gab (Grb2-associated binder) pleckstrin hom | 96.94 | |
| cd01220 | 99 | PH_CDEP Chondrocyte-derived ezrin-like domain cont | 96.92 | |
| cd01251 | 103 | PH_centaurin_alpha Centaurin alpha Pleckstrin homo | 96.86 | |
| cd01219 | 101 | PH_FGD FGD (faciogenital dysplasia protein) plecks | 96.75 | |
| cd01247 | 91 | PH_GPBP Goodpasture antigen binding protein (GPBP) | 96.6 | |
| cd00821 | 96 | PH Pleckstrin homology (PH) domain. Pleckstrin hom | 96.59 | |
| KOG4424 | 623 | consensus Predicted Rho/Rac guanine nucleotide exc | 96.29 | |
| PF15409 | 89 | PH_8: Pleckstrin homology domain | 96.25 | |
| cd01250 | 94 | PH_centaurin Centaurin Pleckstrin homology (PH) do | 96.19 | |
| cd01246 | 91 | PH_oxysterol_bp Oxysterol binding protein (OSBP) P | 96.16 | |
| cd01257 | 101 | PH_IRS Insulin receptor substrate (IRS) pleckstrin | 95.89 | |
| cd01260 | 96 | PH_CNK Connector enhancer of KSR (Kinase suppresso | 95.72 | |
| cd01256 | 110 | PH_dynamin Dynamin pleckstrin homology (PH) domain | 95.7 | |
| cd01218 | 104 | PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | 95.17 | |
| cd00900 | 99 | PH-like Pleckstrin homology-like domain. Pleckstri | 95.09 | |
| KOG1265 | 1189 | consensus Phospholipase C [Lipid transport and met | 94.95 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 94.86 | |
| PF15413 | 112 | PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FE | 94.77 | |
| cd01252 | 125 | PH_cytohesin Cytohesin Pleckstrin homology (PH) do | 94.67 | |
| cd01241 | 102 | PH_Akt Akt pleckstrin homology (PH) domain. Akt pl | 94.39 | |
| cd01261 | 112 | PH_SOS Son of Sevenless (SOS) Pleckstrin homology | 94.35 | |
| KOG1811 | 1141 | consensus Predicted Zn2+-binding protein, contains | 94.34 | |
| KOG0230 | 1598 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 92.62 | |
| cd01245 | 98 | PH_RasGAP_CG5898 RAS GTPase-activating protein (GA | 92.39 | |
| PF08458 | 110 | PH_2: Plant pleckstrin homology-like region; Inter | 91.99 | |
| KOG4693 | 392 | consensus Uncharacterized conserved protein, conta | 90.24 | |
| PF11725 | 1774 | AvrE: Pathogenicity factor; InterPro: IPR021085 Th | 89.89 | |
| cd01254 | 121 | PH_PLD Phospholipase D (PLD) pleckstrin homology ( | 88.84 | |
| PF02403 | 108 | Seryl_tRNA_N: Seryl-tRNA synthetase N-terminal dom | 88.81 | |
| PRK15396 | 78 | murein lipoprotein; Provisional | 88.66 | |
| PF02318 | 118 | FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 | 88.36 | |
| cd01222 | 97 | PH_clg Clg (common-site lymphoma/leukemia guanine | 87.32 | |
| KOG0943 | 3015 | consensus Predicted ubiquitin-protein ligase/hyper | 86.82 | |
| PF04728 | 56 | LPP: Lipoprotein leucine-zipper; InterPro: IPR0068 | 86.79 | |
| cd01242 | 112 | PH_ROK Rok (Rho- associated kinase) pleckstrin hom | 86.65 | |
| PRK09973 | 85 | putative outer membrane lipoprotein; Provisional | 86.63 | |
| KOG3669 | 705 | consensus Uncharacterized conserved protein, conta | 86.13 | |
| cd01232 | 114 | PH_TRIO Trio pleckstrin homology (PH) domain. Trio | 85.88 | |
| PF03962 | 188 | Mnd1: Mnd1 family; InterPro: IPR005647 This family | 85.43 | |
| KOG3723 | 851 | consensus PH domain protein Melted [Signal transdu | 84.98 | |
| PLN02153 | 341 | epithiospecifier protein | 84.22 | |
| cd01253 | 104 | PH_beta_spectrin Beta-spectrin pleckstrin homology | 84.14 | |
| KOG0943 | 3015 | consensus Predicted ubiquitin-protein ligase/hyper | 83.52 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 81.57 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 80.87 | |
| TIGR02449 | 65 | conserved hypothetical protein TIGR02449. Members | 80.73 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 80.71 | |
| PF07106 | 169 | TBPIP: Tat binding protein 1(TBP-1)-interacting pr | 80.43 |
| >COG5184 ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-46 Score=415.61 Aligned_cols=364 Identities=26% Similarity=0.454 Sum_probs=296.4
Q ss_pred cccCCCCcEEEEcCCCCCcccCCCCCcCCccccccccccceEEeccc--CCCCEEEEEecCceEEEEEcCCeEEEEeCCC
Q 001361 256 DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESA--VVLDVQNIACGGRHAALVTKQGEVFSWGEEL 333 (1092)
Q Consensus 256 ~~l~~~G~Vy~WG~n~~~GqLG~g~~~~~~~~~~~~~~~~P~~v~~~--~~~~I~~Ia~G~~hs~~Lt~dG~Vy~wG~N~ 333 (1092)
.....-.+||+||.|. .++||+|.+. ..+..|..+... ....|++++||+.|+++|+.||.||+||.|.
T Consensus 62 ~~~~~~~~v~~~Gsn~-~~eLGlg~de--------~~~~~P~~~~~~~~d~~~i~~~acGg~hsl~ld~Dg~lyswG~N~ 132 (476)
T COG5184 62 HLLVKMASVYSWGSNG-MNELGLGNDE--------TKVDRPQLNPFGRIDKASIIKIACGGNHSLGLDHDGNLYSWGDND 132 (476)
T ss_pred hhhhheeeeEEEecCc-ceeeccCCch--------hcccCceecCcccccceeeEEeecCCceEEeecCCCCEEEeccCc
Confidence 3567889999999999 9999999863 335788877765 5578999999999999999999999999999
Q ss_pred CCccCCCCC----------------CCCCcceEeec----cCCCcEEEEEeCCCeEEEEEeCCcEEEeCCccCCCCccCC
Q 001361 334 GGRLGHGVD----------------SDVSHPKLIDA----LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH 393 (1092)
Q Consensus 334 ~GqLG~g~~----------------~~~~~P~~V~~----l~~~~I~~Ia~G~~hs~aLT~dG~Vy~wG~n~~~~GqLG~ 393 (1092)
.|+||.... .....|..|+. ....+|++++||++++++|+++|+||.||.+ ..+.++.
T Consensus 133 ~G~Lgr~~~~~~~~~~~~~~~~~~~~~~~tP~~v~~~s~~~s~~~vv~l~cg~e~svil~~~G~V~~~gt~--r~~e~~~ 210 (476)
T COG5184 133 DGALGRDIHKDICDQNNDIIDFDDYELESTPFKVPGGSSAKSHLRVVKLACGWEISVILTADGRVYSWGTF--RCGELGQ 210 (476)
T ss_pred ccccccccccccccccccccccchhhcccCCceeeccccccCChheEEeecCCceEEEEccCCcEEEecCc--ccccccc
Confidence 999998761 12567877775 2334899999999999999999999999998 5566666
Q ss_pred CCCc--c----eecceeecCCCCCCcEEEEEeCCCeEEEEEcCCcEEEeecCCCcccCCCCCcccccceeeecCCCC-eE
Q 001361 394 GNEM--S----LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL-RT 466 (1092)
Q Consensus 394 g~~~--~----~~~P~~v~~~l~~~~I~~IscG~~Ht~aLt~dG~Vy~wG~N~~GQLG~g~~~~~~~P~~V~~l~~~-~I 466 (1092)
+... . .++|.++. ...|++++.|.+|.++|+++|+||+||+|.+||||.........+..+..+... .|
T Consensus 211 g~~~~s~k~~~~~~p~~v~----~~~i~qla~G~dh~i~lt~~G~vy~~Gs~qkgqlG~~~~e~~~~~~lv~~~f~i~~i 286 (476)
T COG5184 211 GSYKNSQKTSIQFTPLKVP----KKAIVQLAAGADHLIALTNEGKVYGWGSNQKGQLGRPTSERLKLVVLVGDPFAIRNI 286 (476)
T ss_pred ccccccccceeeeeeeecC----chheeeeccCCceEEEEecCCcEEEecCCcccccCCchhhhcccccccCChhhhhhh
Confidence 5322 2 24444443 357999999999999999999999999999999999887777666666544333 36
Q ss_pred EEEecCCceEEEEEEeeecCCCCccCCCCeEEEecCCCCCCcCCCCC----CcceeeEEecccCCCCeEEEEeeCcEEEE
Q 001361 467 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDK----EARLVPTCVAALVEPNFCQVSCGHSLTVA 542 (1092)
Q Consensus 467 ~~VacG~~ht~aLte~~~~~s~~~~~~~G~ly~WG~n~~GQLG~g~~----~~~~~P~~V~~l~~~~I~~Ia~G~~htla 542 (1092)
..|+||.+|++||. .+|++|+||.|.+||||.+.. .....|+....+....|..|++|..|+++
T Consensus 287 ~~vacG~~h~~al~------------~~G~i~a~G~n~fgqlg~~~~~~~~a~~tk~~~~~~~~~~~i~~is~ge~H~l~ 354 (476)
T COG5184 287 KYVACGKDHSLALD------------EDGEIYAWGVNIFGQLGAGSDGEIGALTTKPNYKQLLSGVTICSISAGESHSLI 354 (476)
T ss_pred hhcccCcceEEEEc------------CCCeEEEeccchhcccccCcccccceeeccccccccCCCceEEEEecCcceEEE
Confidence 88999999999998 599999999999999999821 12345666666777789999999999999
Q ss_pred EecCCcEEEEeCCCCCCCCCCCCCC---ccceeeccccCCCCEEEEEEcCCEEEEEEcCCeEEEEeCCCCCCCCCCCC-C
Q 001361 543 LTTTGHVYTMGSPVYGQLGDPKANG---KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT-D 618 (1092)
Q Consensus 543 Lt~dG~Vy~wG~N~~GQLG~~~~~~---~~P~~v~~~l~~~~I~~Ia~G~~HslaLT~dG~Vy~WG~n~~GQLG~G~~-~ 618 (1092)
|..+|.||.||.+..||||.+.... ..|..+.. ...+.+|+||..|.++.+.+|+||.||.|.+|+||.|+. +
T Consensus 355 L~~~G~l~a~Gr~~~~qlg~~~~~~~~~~~~~~ls~---~~~~~~v~~gt~~~~~~t~~gsvy~wG~ge~gnlG~g~~~~ 431 (476)
T COG5184 355 LRKDGTLYAFGRGDRGQLGIQEEITIDVSTPTKLSV---AIKLEQVACGTHHNIARTDDGSVYSWGWGEHGNLGNGPKEA 431 (476)
T ss_pred EecCceEEEecCCccccccCcccceeecCCcccccc---ccceEEEEecCccceeeccCCceEEecCchhhhccCCchhh
Confidence 9999999999999999999987332 22332221 346999999999999999999999999999999999984 5
Q ss_pred CcccCceeee--ccCCceeeEEecCCcceeeee
Q 001361 619 DRNFPSLVEA--LKDKQVKSIVCGTSFTAAICL 649 (1092)
Q Consensus 619 ~~~~P~~V~~--l~~~~V~~IacG~~~T~al~~ 649 (1092)
+...|+++.. +....++..-||.+++++.-.
T Consensus 432 ~~~~pt~i~~~~~~~~~~i~~g~~~~~~v~~~~ 464 (476)
T COG5184 432 DVLVPTLIRQPLLSGHNIILAGYGNQFSVIEET 464 (476)
T ss_pred hccccccccccccCCCceEEeccCcceEEEecc
Confidence 6678888873 667778888788777766554
|
|
| >KOG1427 consensus Uncharacterized conserved protein, contains RCC1 domain [Function unknown] | Back alignment and domain information |
|---|
| >COG5184 ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1427 consensus Uncharacterized conserved protein, contains RCC1 domain [Function unknown] | Back alignment and domain information |
|---|
| >PF08381 BRX: Transcription factor regulating root and shoot growth via Pin3; InterPro: IPR013591 This is a short domain, approximately 35 residues in length that is found near the C terminus in a number of plant proteins, being repeated in some members | Back alignment and domain information |
|---|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
| >KOG1428 consensus Inhibitor of type V adenylyl cyclases/Neuronal presynaptic protein Highwire/PAM/RPM-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1428 consensus Inhibitor of type V adenylyl cyclases/Neuronal presynaptic protein Highwire/PAM/RPM-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis | Back alignment and domain information |
|---|
| >PF13713 BRX_N: Transcription factor BRX N-terminal domain | Back alignment and domain information |
|---|
| >KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >KOG1818 consensus Membrane trafficking and cell signaling protein HRS, contains VHS and FYVE domains [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF00415 RCC1: Regulator of chromosome condensation (RCC1) repeat; InterPro: IPR000408 The regulator of chromosome condensation (RCC1) [] is a eukaryotic protein which binds to chromatin and interacts with ran, a nuclear GTP-binding protein IPR002041 from INTERPRO, to promote the loss of bound GDP and the uptake of fresh GTP, thus acting as a guanine-nucleotide dissociation stimulator (GDS) | Back alignment and domain information |
|---|
| >KOG0941 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >smart00064 FYVE Protein present in Fab1, YOTB, Vac1, and EEA1 | Back alignment and domain information |
|---|
| >KOG1264 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF00415 RCC1: Regulator of chromosome condensation (RCC1) repeat; InterPro: IPR000408 The regulator of chromosome condensation (RCC1) [] is a eukaryotic protein which binds to chromatin and interacts with ran, a nuclear GTP-binding protein IPR002041 from INTERPRO, to promote the loss of bound GDP and the uptake of fresh GTP, thus acting as a guanine-nucleotide dissociation stimulator (GDS) | Back alignment and domain information |
|---|
| >KOG1729 consensus FYVE finger containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1819 consensus FYVE finger-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
| >PTZ00303 phosphatidylinositol kinase; Provisional | Back alignment and domain information |
|---|
| >KOG0941 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF13540 RCC1_2: Regulator of chromosome condensation (RCC1) repeat; PDB: 3QI0_D 1JTD_B 3QHY_B | Back alignment and domain information |
|---|
| >PF13540 RCC1_2: Regulator of chromosome condensation (RCC1) repeat; PDB: 3QI0_D 1JTD_B 3QHY_B | Back alignment and domain information |
|---|
| >cd00065 FYVE FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1; | Back alignment and domain information |
|---|
| >KOG2999 consensus Regulator of Rac1, required for phagocytosis and cell migration [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1842 consensus FYVE finger-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1841 consensus Smad anchor for receptor activation [Defense mechanisms] | Back alignment and domain information |
|---|
| >cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown] | Back alignment and domain information |
|---|
| >cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01238 PH_Tec Tec pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1843 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01264 PH_melted Melted pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ] | Back alignment and domain information |
|---|
| >smart00233 PH Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd00821 PH Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF15409 PH_8: Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >cd00900 PH-like Pleckstrin homology-like domain | Back alignment and domain information |
|---|
| >KOG1265 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C | Back alignment and domain information |
|---|
| >cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01241 PH_Akt Akt pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1811 consensus Predicted Zn2+-binding protein, contains FYVE domain [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function | Back alignment and domain information |
|---|
| >KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] | Back alignment and domain information |
|---|
| >PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others | Back alignment and domain information |
|---|
| >cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF02403 Seryl_tRNA_N: Seryl-tRNA synthetase N-terminal domain; InterPro: IPR015866 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >PRK15396 murein lipoprotein; Provisional | Back alignment and domain information |
|---|
| >PF02318 FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 This entry represents the zinc-binding domain found in rabphilin Rab3A | Back alignment and domain information |
|---|
| >cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0943 consensus Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF04728 LPP: Lipoprotein leucine-zipper; InterPro: IPR006817 This repeating sequence, NAKVDQLSNDV, is found in the enterobacterial outer membrane lipoprotein LPP | Back alignment and domain information |
|---|
| >cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PRK09973 putative outer membrane lipoprotein; Provisional | Back alignment and domain information |
|---|
| >KOG3669 consensus Uncharacterized conserved protein, contains dysferlin, TECPR and PH domains [General function prediction only] | Back alignment and domain information |
|---|
| >cd01232 PH_TRIO Trio pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF03962 Mnd1: Mnd1 family; InterPro: IPR005647 This family of proteins includes meiotic nuclear division protein 1 (MND1) from Saccharomyces cerevisiae (Baker's yeast) | Back alignment and domain information |
|---|
| >KOG3723 consensus PH domain protein Melted [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
| >cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0943 consensus Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >TIGR02449 conserved hypothetical protein TIGR02449 | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >PF07106 TBPIP: Tat binding protein 1(TBP-1)-interacting protein (TBPIP); InterPro: IPR010776 This family consists of several eukaryotic TBP-1 interacting protein (TBPIP) sequences | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1092 | ||||
| 4d9s_A | 406 | Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv | 6e-44 | ||
| 4dnv_A | 370 | Crystal Structure Of The W285f Mutant Of Uvb-Resist | 7e-44 | ||
| 4dnw_A | 374 | Crystal Structure Of Uvb-Resistance Protein Uvr8 Le | 8e-44 | ||
| 4dnu_A | 372 | Crystal Structure Of The W285a Mutant Of Uvb-Resist | 5e-43 | ||
| 3kci_A | 389 | The Third Rld Domain Of Herc2 Length = 389 | 2e-35 | ||
| 3kci_A | 389 | The Third Rld Domain Of Herc2 Length = 389 | 3e-15 | ||
| 3mvd_K | 423 | Crystal Structure Of The Chromatin Factor Rcc1 In C | 2e-17 | ||
| 1a12_A | 413 | Regulator Of Chromosome Condensation (Rcc1) Of Huma | 4e-14 | ||
| 1i2m_B | 402 | Ran-Rcc1-So4 Complex Length = 402 | 7e-14 | ||
| 3of7_A | 473 | The Crystal Structure Of Prp20p From Saccharomyces | 7e-08 | ||
| 2yqm_A | 89 | Solution Structure Of The Fyve Domain In Zinc Finge | 4e-07 | ||
| 2yw8_A | 82 | Crystal Structure Of Human Run And Fyve Domain-Cont | 5e-07 | ||
| 1joc_A | 125 | Eea1 Homodimer Of C-Terminal Fyve Domain Bound To I | 6e-07 | ||
| 1dvp_A | 220 | Crystal Structure Of The Vhs And Fyve Tandem Domain | 2e-06 | ||
| 3zyq_A | 226 | Crystal Structure Of The Tandem Vhs And Fyve Domain | 9e-06 | ||
| 1hyi_A | 65 | Solution Structure Of The Eea1 Fyve Domain Complexe | 1e-05 | ||
| 3mpx_A | 434 | Crystal Structure Of The Dh And Ph-1 Domains Of Hum | 5e-05 | ||
| 3t7l_A | 90 | Crystal Structure Of The Fyve Domain Of Endofin (Zf | 2e-04 | ||
| 1vfy_A | 73 | Phosphatidylinositol-3-Phosphate Binding Fyve Domai | 4e-04 | ||
| 1z2q_A | 84 | High-Resolution Solution Structure Of The Lm5-1 Fyv | 5e-04 |
| >pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv Resistance Locus 8) Length = 406 | Back alignment and structure |
|
| >pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance Protein Uvr8 Length = 370 | Back alignment and structure |
| >pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8 Length = 374 | Back alignment and structure |
| >pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance Protein Uvr8 Length = 372 | Back alignment and structure |
| >pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2 Length = 389 | Back alignment and structure |
| >pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2 Length = 389 | Back alignment and structure |
| >pdb|3MVD|K Chain K, Crystal Structure Of The Chromatin Factor Rcc1 In Complex With The Nucleosome Core Particle Length = 423 | Back alignment and structure |
| >pdb|1A12|A Chain A, Regulator Of Chromosome Condensation (Rcc1) Of Human Length = 413 | Back alignment and structure |
| >pdb|1I2M|B Chain B, Ran-Rcc1-So4 Complex Length = 402 | Back alignment and structure |
| >pdb|3OF7|A Chain A, The Crystal Structure Of Prp20p From Saccharomyces Cerevisiae And Its Binding Properties To Gsp1p And Histones Length = 473 | Back alignment and structure |
| >pdb|2YQM|A Chain A, Solution Structure Of The Fyve Domain In Zinc Finger Fyve Domain-Containing Protein 12 Length = 89 | Back alignment and structure |
| >pdb|2YW8|A Chain A, Crystal Structure Of Human Run And Fyve Domain-Containing Protein Length = 82 | Back alignment and structure |
| >pdb|1JOC|A Chain A, Eea1 Homodimer Of C-Terminal Fyve Domain Bound To Inositol 1,3-Diphosphate Length = 125 | Back alignment and structure |
| >pdb|1DVP|A Chain A, Crystal Structure Of The Vhs And Fyve Tandem Domains Of Hrs, A Protein Involved In Membrane Trafficking And Signal Transduction Length = 220 | Back alignment and structure |
| >pdb|3ZYQ|A Chain A, Crystal Structure Of The Tandem Vhs And Fyve Domains Of Hepatocyte Growth Factor-Regulated Tyrosine Kinase Substrate (Hgs-Hrs) At 1.48 A Resolution Length = 226 | Back alignment and structure |
| >pdb|1HYI|A Chain A, Solution Structure Of The Eea1 Fyve Domain Complexed With Inositol 1,3-Bisphosphate Length = 65 | Back alignment and structure |
| >pdb|3MPX|A Chain A, Crystal Structure Of The Dh And Ph-1 Domains Of Human Fgd5 Length = 434 | Back alignment and structure |
| >pdb|3T7L|A Chain A, Crystal Structure Of The Fyve Domain Of Endofin (Zfyve16) At 1.1a Resolution Length = 90 | Back alignment and structure |
| >pdb|1VFY|A Chain A, Phosphatidylinositol-3-Phosphate Binding Fyve Domain Of Vps27p Protein From Saccharomyces Cerevisiae Length = 73 | Back alignment and structure |
| >pdb|1Z2Q|A Chain A, High-Resolution Solution Structure Of The Lm5-1 Fyve Domain From Leishmania Major Length = 84 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Length = 406 | Back alignment and structure |
|---|
Score = 423 bits (1089), Expect = e-138
Identities = 141/430 (32%), Positives = 198/430 (46%), Gaps = 45/430 (10%)
Query: 239 RVSLSSAVSSSSQGSGH-----DDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDS 293
+ V S G+ H V WG DG LG G D
Sbjct: 11 VTAPPRKVLIISAGASHSVALLSGDI----VCSWGR-GEDGQLGHG---------DAEDR 56
Query: 294 FVPKAVESAVVLDVQNIACGGRHAALVTKQG-EVFSWGEELGGRLGHGVDSDVSHPKLID 352
P + + + ++ CG H ++ G EV+SWG GRLGHG SD+ P I
Sbjct: 57 PSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK 116
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 412
AL I ++ +ACG+ H AVT+ G++ +WG N G LG G+ +P+K+ EGI
Sbjct: 117 ALHGIRIKQIACGDSHCLAVTMEGEVQSWG-RN-QNGQLGLGDTEDSLVPQKIQA-FEGI 173
Query: 413 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
+ V+ G HTA VT G L+ +G G +G LG GDR P V S G + ACG
Sbjct: 174 RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG 233
Query: 473 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQ 532
HT +V SG L+T+G G+LGHGD E L+P + AL Q
Sbjct: 234 WRHTISVSY------------SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQ 281
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDP-KANGKLPTRVEGKLTKNFVEEIACGDYH 591
+S G T+ALT+ G +Y G +GQ+G + P +V V +++CG H
Sbjct: 282 ISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRF-PDDQKVVQVSCGWRH 340
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC--- 648
+T R V+ WG+G NG+LG G++ DRNFP ++EAL G ++
Sbjct: 341 TLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSV----DGASGQHIESSNIDPS 396
Query: 649 -LHKWVSGVD 657
WVS +
Sbjct: 397 SGKSWVSPAE 406
|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Length = 406 | Back alignment and structure |
|---|
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} Length = 389 | Back alignment and structure |
|---|
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} Length = 389 | Back alignment and structure |
|---|
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} Length = 389 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B Length = 413 | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} Length = 473 | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} Length = 473 | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} Length = 473 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1 Length = 131 | Back alignment and structure |
|---|
| >1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A Length = 125 | Back alignment and structure |
|---|
| >2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A Length = 82 | Back alignment and structure |
|---|
| >1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major} Length = 84 | Back alignment and structure |
|---|
| >1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1 Length = 88 | Back alignment and structure |
|---|
| >3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens} Length = 90 | Back alignment and structure |
|---|
| >1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 84 | Back alignment and structure |
|---|
| >3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A Length = 203 | Back alignment and structure |
|---|
| >1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1 Length = 220 | Back alignment and structure |
|---|
| >1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1 Length = 73 | Back alignment and structure |
|---|
| >3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A* Length = 226 | Back alignment and structure |
|---|
| >3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens} Length = 434 | Back alignment and structure |
|---|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} Length = 885 | Back alignment and structure |
|---|
| >1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1 Length = 120 | Back alignment and structure |
|---|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B Length = 799 | Back alignment and structure |
|---|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A Length = 816 | Back alignment and structure |
|---|
| >2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A Length = 406 | Back alignment and structure |
|---|
| >1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1 Length = 134 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1092 | |||
| 3kci_A | 389 | Probable E3 ubiquitin-protein ligase HERC2; WD40, | 100.0 | |
| 4d9s_A | 406 | UVB-resistance protein UVR8; UV resistance, UV-B p | 100.0 | |
| 1a12_A | 413 | RCC1, regulator of chromosome condensation 1; guan | 100.0 | |
| 3mvd_K | 423 | Regulator of chromosome condensation; protein-DNA | 100.0 | |
| 3of7_A | 473 | Regulator of chromosome condensation; beta-propell | 100.0 | |
| 4d9s_A | 406 | UVB-resistance protein UVR8; UV resistance, UV-B p | 100.0 | |
| 3kci_A | 389 | Probable E3 ubiquitin-protein ligase HERC2; WD40, | 100.0 | |
| 3mvd_K | 423 | Regulator of chromosome condensation; protein-DNA | 100.0 | |
| 1a12_A | 413 | RCC1, regulator of chromosome condensation 1; guan | 100.0 | |
| 3of7_A | 473 | Regulator of chromosome condensation; beta-propell | 100.0 | |
| 3qhy_B | 282 | Beta-lactamase inhibitory protein II; enyzme-inhib | 100.0 | |
| 3qhy_B | 282 | Beta-lactamase inhibitory protein II; enyzme-inhib | 100.0 | |
| 1mai_A | 131 | Phospholipase C delta-1; pleckstrin, inositol tris | 99.89 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 99.48 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 99.47 | |
| 1x4u_A | 84 | Zinc finger, FYVE domain containing 27 isoform B; | 99.47 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 99.46 | |
| 2yw8_A | 82 | RUN and FYVE domain-containing protein 1; structur | 99.38 | |
| 1z2q_A | 84 | LM5-1; membrane protein, FYVE domain, zinc-finger; | 99.37 | |
| 3a98_B | 203 | Engulfment and cell motility protein 1; protein-pr | 99.35 | |
| 3t7l_A | 90 | Zinc finger FYVE domain-containing protein 16; str | 99.32 | |
| 1joc_A | 125 | EEA1, early endosomal autoantigen 1; FYVE domain, | 99.3 | |
| 1vfy_A | 73 | Phosphatidylinositol-3-phosphate binding FYVE doma | 99.25 | |
| 1wfk_A | 88 | Zinc finger, FYVE domain containing 19; riken stru | 99.23 | |
| 3zyq_A | 226 | Hepatocyte growth factor-regulated tyrosine kinas | 99.1 | |
| 1dvp_A | 220 | HRS, hepatocyte growth factor-regulated tyrosine k | 99.07 | |
| 1y02_A | 120 | CARP2, FYVE-ring finger protein sakura; zinc-bindi | 99.03 | |
| 3mpx_A | 434 | FYVE, rhogef and PH domain-containing protein 5; s | 98.86 | |
| 2lul_A | 164 | Tyrosine-protein kinase TEC; structural genomics, | 97.85 | |
| 1v5u_A | 117 | SBF1, SET binding factor 1; MTMR5, the pleckstrin | 97.64 | |
| 1fao_A | 126 | Dual adaptor of phosphotyrosine and 3- phosphoinos | 97.5 | |
| 2dhk_A | 119 | TBC1 domain family member 2; PH domain, paris-1, s | 97.48 | |
| 2d9v_A | 130 | Pleckstrin homology domain-containing protein fami | 97.47 | |
| 2d9x_A | 120 | Oxysterol binding protein-related protein 11; PH d | 97.36 | |
| 2cod_A | 115 | Centaurin-delta 1; ARF GAP and RHO GAP with ankyri | 97.3 | |
| 2rlo_A | 128 | Centaurin-gamma 1; split PH domain, alternative sp | 97.28 | |
| 2dn6_A | 115 | KIAA0640 protein; PH domain, structural genomics, | 97.24 | |
| 1eaz_A | 125 | Tandem PH domain containing protein-1; lipid-bindi | 97.21 | |
| 1pls_A | 113 | Pleckstrin homology domain; phosphorylation; NMR { | 97.18 | |
| 1btk_A | 169 | Bruton'S tyrosine kinase; transferase, PH domain, | 97.13 | |
| 1x05_A | 129 | Pleckstrin; PH domain, structural genomics, NPPSFA | 97.07 | |
| 1v89_A | 118 | Hypothetical protein KIAA0053; pleckstrin homology | 97.02 | |
| 1v5p_A | 126 | Pleckstrin homology domain-containing, family A; T | 96.98 | |
| 2i5f_A | 109 | Pleckstrin; PH domain, protein-inositol phosphate | 96.89 | |
| 1wgq_A | 109 | FYVE, rhogef and PH domain containing 6; ethanol d | 96.87 | |
| 2rsg_A | 94 | Collagen type IV alpha-3-binding protein; pleckstr | 96.81 | |
| 1wg7_A | 150 | Dedicator of cytokinesis protein 9; pleckstrin hom | 96.78 | |
| 1u5d_A | 108 | SKAP55, SRC kinase-associated phosphoprotein of 55 | 96.75 | |
| 1fgy_A | 127 | GRP1; PH domain, signaling protein; HET: 4IP; 1.50 | 96.66 | |
| 1x1g_A | 129 | Pleckstrin 2; PH domain, structural genomics, rike | 96.65 | |
| 2d9y_A | 117 | Pleckstrin homology domain-containing protein fami | 96.54 | |
| 3aj4_A | 112 | Pleckstrin homology domain-containing family B ME; | 96.52 | |
| 1u5f_A | 148 | SRC-associated adaptor protein; PH domain of SKAP- | 96.47 | |
| 3rcp_A | 103 | Pleckstrin homology domain-containing family A ME; | 96.43 | |
| 1unq_A | 125 | RAC-alpha serine/threonine kinase; transferase, pl | 96.36 | |
| 1x1f_A | 149 | Signal-transducing adaptor protein 1; docking prot | 96.33 | |
| 3tfm_A | 228 | Myosin X; split PH domain, motor protein; 2.53A {R | 96.32 | |
| 1qqg_A | 264 | IRS-1, insulin receptor substrate 1; beta-sandwhic | 96.29 | |
| 2yry_A | 122 | Pleckstrin homology domain-containing family A mem | 96.21 | |
| 1upq_A | 123 | PEPP1; PH domain, phosphoinositide binding, signal | 96.21 | |
| 2cof_A | 107 | Protein KIAA1914; PH domain, structural genomics, | 96.16 | |
| 2dkp_A | 128 | Pleckstrin homology domain-containing family A mem | 96.14 | |
| 2da0_A | 114 | 130-kDa phosphatidylinositol 4,5-biphosphate- depe | 96.07 | |
| 1dyn_A | 125 | Dynamin; signal transduction protein; 2.20A {Homo | 96.04 | |
| 2rov_A | 117 | RHO-associated protein kinase 2; ATP-binding, coil | 96.01 | |
| 2w2x_D | 124 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 95.95 | |
| 1u5e_A | 211 | SRC-associated adaptor protein; novel dimerization | 95.81 | |
| 2y7b_A | 134 | Actin-binding protein anillin; cell cycle; 1.90A { | 95.32 | |
| 3lju_X | 386 | ARF-GAP with dual PH domain-containing protein 1; | 95.22 | |
| 1v88_A | 130 | Oxysterol binding protein-related protein 8; vesic | 95.13 | |
| 3cxb_B | 112 | Pleckstrin homology domain-containing family M mem | 95.06 | |
| 2j59_M | 168 | RHO-GTPase activating protein 10; ARF, ARF1, ARFBD | 94.82 | |
| 1wjm_A | 123 | Beta-spectrin III; PH domain, signal transduction, | 94.57 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 94.49 | |
| 1btn_A | 106 | Beta-spectrin; signal transduction protein; HET: I | 94.18 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 94.15 | |
| 1wi1_A | 126 | Calcium-dependent activator protein for secretion, | 94.13 | |
| 2coc_A | 112 | FYVE, rhogef and PH domain containing protein 3; s | 94.05 | |
| 2vrw_B | 406 | P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP | 93.81 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 93.57 | |
| 3lju_X | 386 | ARF-GAP with dual PH domain-containing protein 1; | 93.39 | |
| 2r09_A | 347 | Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph | 93.28 | |
| 2p0d_A | 129 | RHO GTPase-activating protein 9; protein-phosphoin | 92.78 | |
| 4gbf_A | 400 | Phikz131; 7-bladed beta-propeller, possibly partic | 92.62 | |
| 4a6h_A | 120 | Phosphatidylinositol 4,5-bisphosphate-binding Pro | 92.57 | |
| 4gbf_A | 400 | Phikz131; 7-bladed beta-propeller, possibly partic | 90.99 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 90.63 | |
| 3u1c_A | 101 | Tropomyosin alpha-1 chain; anti-parallel coiled co | 90.25 | |
| 1v61_A | 132 | RAC/CDC42 guanine nucleotide exchange factor (GEF) | 90.1 | |
| 2fjl_A | 150 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 90.02 | |
| 3a8p_A | 263 | T-lymphoma invasion and metastasis-inducing protei | 90.01 | |
| 3tca_A | 291 | Amyloid beta A4 precursor protein-binding family 1 | 89.89 | |
| 3iv1_A | 78 | Tumor susceptibility gene 101 protein; coiled_COIL | 89.32 | |
| 1dro_A | 122 | Beta-spectrin; cytoskeleton; NMR {Drosophila melan | 89.01 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 88.73 | |
| 2q13_A | 385 | DCC-interacting protein 13 alpha; APPL1, BAR domai | 88.13 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 87.71 | |
| 1jcd_A | 52 | Major outer membrane lipoprotein; protein folding, | 86.76 | |
| 4h8s_A | 407 | DCC-interacting protein 13-beta; BAR domain, pleck | 86.56 | |
| 3mq7_A | 121 | Bone marrow stromal antigen 2; HIV, antiviral prot | 85.71 | |
| 1zbd_B | 134 | Rabphilin-3A; G protein, effector, RABCDR, synapti | 85.58 | |
| 3no0_A | 276 | DNA gyrase subunit A; DNA topology, topoisomerase, | 84.44 | |
| 3u59_A | 101 | Tropomyosin beta chain; muscle contraction, actin, | 83.44 | |
| 2zet_C | 153 | Melanophilin; complex, GTP-binding protein, GTPase | 82.53 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 82.41 | |
| 2yy0_A | 53 | C-MYC-binding protein; conserved hypothetical prot | 81.99 | |
| 3a2a_A | 58 | Voltage-gated hydrogen channel 1; voltage-gated pr | 81.62 | |
| 3vmx_A | 48 | Voltage-gated hydrogen channel 1; coiled-coil, ION | 80.53 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 80.22 | |
| 4emc_A | 190 | Monopolin complex subunit CSM1; RWD domain, kineto | 80.02 |
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-66 Score=604.84 Aligned_cols=372 Identities=35% Similarity=0.626 Sum_probs=337.2
Q ss_pred cccccCCCCcEEEEcCCCCCcccCCCCCcCCccccccccccceEEecccCCCCEEEEEecCceEEEEEcCCeEEEEeCCC
Q 001361 254 GHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 333 (1092)
Q Consensus 254 ~~~~l~~~G~Vy~WG~n~~~GqLG~g~~~~~~~~~~~~~~~~P~~v~~~~~~~I~~Ia~G~~hs~~Lt~dG~Vy~wG~N~ 333 (1092)
.+.+++++|+||+||.|. +||||.+.. .+...|.+++.+...+|++|+||..|+++|+++|+||+||.|.
T Consensus 12 ~~~~l~~~G~v~~wG~n~-~GqLG~~~~---------~~~~~p~~v~~~~~~~i~~i~~G~~~~~~l~~~G~v~~wG~n~ 81 (389)
T 3kci_A 12 ENLYFQGSGTIYGWGHNH-RGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 81 (389)
T ss_dssp ---------CEEEEEECT-TSTTSSCSC---------SEEEEEEECHHHHHTCEEEEEEETTEEEEEETTSCEEEEECCG
T ss_pred cceeECCCCeEEEeeCCC-CccCCCCcC---------ccccCCEecccccCCceEEEEeCCCeEEEEcCCCcEEEEECCC
Confidence 456799999999999999 999998764 5677899998888889999999999999999999999999999
Q ss_pred CCccCCCCCCCCCcceEeeccCCCcE--EEEEeCCCeEEEEEeCCcEEEeCCccCCCCccCCCCCcceecceeecCCCCC
Q 001361 334 GGRLGHGVDSDVSHPKLIDALKNINV--ELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 411 (1092)
Q Consensus 334 ~GqLG~g~~~~~~~P~~V~~l~~~~I--~~Ia~G~~hs~aLT~dG~Vy~wG~n~~~~GqLG~g~~~~~~~P~~v~~~l~~ 411 (1092)
+||||.+...+...|.++..+.+..| ++|+||.+|++||+++|+||+||.| .+||||+++......|.++.. +.+
T Consensus 82 ~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n--~~GqLG~g~~~~~~~p~~v~~-l~~ 158 (389)
T 3kci_A 82 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA--EDGKLGHGNRSPCDRPRVIES-LRG 158 (389)
T ss_dssp GGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECC--GGGTTCSSSCCCEEEEEECGG-GTT
T ss_pred CCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCC--CCCcCCCCCCccCcCCeEecc-cCC
Confidence 99999999888899999998877644 7888999999999999999999999 899999999988889998875 567
Q ss_pred CcEEEEEeCCCeEEEEEcCCcEEEeecCCCcccCCCCCcccccceeeecCCCCeEEEEecCC--ceEEEEEEeeecCCCC
Q 001361 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV--WHTAAVVEVMVGSSSS 489 (1092)
Q Consensus 412 ~~I~~IscG~~Ht~aLt~dG~Vy~wG~N~~GQLG~g~~~~~~~P~~V~~l~~~~I~~VacG~--~ht~aLte~~~~~s~~ 489 (1092)
.+|++|+||.+|+++|+++|+||+||.|.+||||+++......|..+..+.+.+|++|+||. .|+++|+
T Consensus 159 ~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~--------- 229 (389)
T 3kci_A 159 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT--------- 229 (389)
T ss_dssp SCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEE---------
T ss_pred CeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEc---------
Confidence 79999999999999999999999999999999999999999999999999999999999995 8999998
Q ss_pred ccCCCCeEEEecCCCCCCcCCCCCCcceeeEEecccCCCCeEEEEeeCcEEEEEecCCcEEEEeCCCCCCCCCCCCCC-c
Q 001361 490 SNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-K 568 (1092)
Q Consensus 490 ~~~~~G~ly~WG~n~~GQLG~g~~~~~~~P~~V~~l~~~~I~~Ia~G~~htlaLt~dG~Vy~wG~N~~GQLG~~~~~~-~ 568 (1092)
.+|+||+||.|.+||||.++......|.++..+.+.+|++|+||.+|++||+++|+||+||.|.+||||.+.... .
T Consensus 230 ---~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~ 306 (389)
T 3kci_A 230 ---DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 306 (389)
T ss_dssp ---TTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEE
T ss_pred ---cCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCcccc
Confidence 599999999999999999999889999999998888999999999999999999999999999999999987544 4
Q ss_pred cceeeccccCCCCEEEEEEcCCEEEEEEcCCeEEEEeCCCCCCCCCCCCCCcccCceeeeccCCceeeEEecCCcceeee
Q 001361 569 LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 648 (1092)
Q Consensus 569 ~P~~v~~~l~~~~I~~Ia~G~~HslaLT~dG~Vy~WG~n~~GQLG~G~~~~~~~P~~V~~l~~~~V~~IacG~~~T~al~ 648 (1092)
.|..+.. +.+..|++|+||.+|+++|+++|+||+||.|.+||||+|+..+...|++|+.+.+.+|++|+||..||+||+
T Consensus 307 ~P~~v~~-l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~~~~~~v~~va~G~~ht~al~ 385 (389)
T 3kci_A 307 RPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 385 (389)
T ss_dssp EEEECGG-GTTCCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCCCEEEEETTEEEEEC
T ss_pred CCeEecc-CCCCCEEEEEeccCeEEEECCCCCEEEeeCCCCCcCCCCCCCCccCcEEecccCCCCEEEEEecCCcEEEEe
Confidence 6777774 667889999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eec
Q 001361 649 LHK 651 (1092)
Q Consensus 649 ~~k 651 (1092)
..+
T Consensus 386 ~~~ 388 (389)
T 3kci_A 386 TSK 388 (389)
T ss_dssp C--
T ss_pred cCC
Confidence 643
|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A | Back alignment and structure |
|---|
| >1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A | Back alignment and structure |
|---|
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B | Back alignment and structure |
|---|
| >1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
| >1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A | Back alignment and structure |
|---|
| >2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A | Back alignment and structure |
|---|
| >1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major} | Back alignment and structure |
|---|
| >3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A | Back alignment and structure |
|---|
| >3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens} | Back alignment and structure |
|---|
| >1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A | Back alignment and structure |
|---|
| >1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1 | Back alignment and structure |
|---|
| >1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1 | Back alignment and structure |
|---|
| >3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A* | Back alignment and structure |
|---|
| >1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1 | Back alignment and structure |
|---|
| >1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1 | Back alignment and structure |
|---|
| >3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A | Back alignment and structure |
|---|
| >2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
| >2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A* | Back alignment and structure |
|---|
| >1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A | Back alignment and structure |
|---|
| >1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A | Back alignment and structure |
|---|
| >1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A* | Back alignment and structure |
|---|
| >1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A | Back alignment and structure |
|---|
| >1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A | Back alignment and structure |
|---|
| >3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A | Back alignment and structure |
|---|
| >1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A | Back alignment and structure |
|---|
| >1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus} | Back alignment and structure |
|---|
| >1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A* | Back alignment and structure |
|---|
| >2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* | Back alignment and structure |
|---|
| >2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A | Back alignment and structure |
|---|
| >2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus} | Back alignment and structure |
|---|
| >2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A | Back alignment and structure |
|---|
| >1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A | Back alignment and structure |
|---|
| >2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
| >3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C* | Back alignment and structure |
|---|
| >1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B | Back alignment and structure |
|---|
| >2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A | Back alignment and structure |
|---|
| >1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
| >1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A | Back alignment and structure |
|---|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
| >1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A | Back alignment and structure |
|---|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
| >3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C* | Back alignment and structure |
|---|
| >2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A* | Back alignment and structure |
|---|
| >2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A* | Back alignment and structure |
|---|
| >4gbf_A Phikz131; 7-bladed beta-propeller, possibly participates in binding of phage to the HOST cell, viral protein; 1.95A {Pseudomonas phage phikz} | Back alignment and structure |
|---|
| >4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A | Back alignment and structure |
|---|
| >4gbf_A Phikz131; 7-bladed beta-propeller, possibly participates in binding of phage to the HOST cell, viral protein; 1.95A {Pseudomonas phage phikz} | Back alignment and structure |
|---|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
| >3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A | Back alignment and structure |
|---|
| >1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A | Back alignment and structure |
|---|
| >3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus} | Back alignment and structure |
|---|
| >3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
| >2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A | Back alignment and structure |
|---|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
| >1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A | Back alignment and structure |
|---|
| >4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A | Back alignment and structure |
|---|
| >1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1 | Back alignment and structure |
|---|
| >3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus} | Back alignment and structure |
|---|
| >2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus} | Back alignment and structure |
|---|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
| >2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus} | Back alignment and structure |
|---|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
| >4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1092 | ||||
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 3e-39 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 5e-24 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 2e-22 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 8e-16 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 4e-14 | |
| d1maia_ | 119 | b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus | 4e-30 | |
| d2zkmx3 | 131 | b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human | 8e-24 | |
| d1joca1 | 64 | g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) | 5e-19 | |
| d1dvpa2 | 72 | g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila me | 3e-18 | |
| d1wfka_ | 88 | g.50.1.1 (A:) Zinc finger FYVE domain containing p | 5e-18 | |
| d1vfya_ | 67 | g.50.1.1 (A:) vps27p protein {Baker's yeast (Sacch | 7e-17 | |
| d1jtdb_ | 273 | b.69.5.2 (B:) beta-lactamase inhibitor protein-II, | 1e-14 | |
| d1jtdb_ | 273 | b.69.5.2 (B:) beta-lactamase inhibitor protein-II, | 2e-12 | |
| d1jtdb_ | 273 | b.69.5.2 (B:) beta-lactamase inhibitor protein-II, | 2e-06 | |
| d1jtdb_ | 273 | b.69.5.2 (B:) beta-lactamase inhibitor protein-II, | 5e-06 | |
| d1zbdb_ | 124 | g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat | 2e-14 | |
| d1y02a2 | 51 | g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger pro | 2e-13 |
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: Regulator of chromosome condensation RCC1 domain: Regulator of chromosome condensation RCC1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 148 bits (374), Expect = 3e-39
Identities = 97/409 (23%), Positives = 151/409 (36%), Gaps = 50/409 (12%)
Query: 262 GDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 321
G V G+ G LG G M+ P V DV GG H ++
Sbjct: 15 GLVLTLGQ-GDVGQLGLG--------ENVMERKKPALVSIPE--DVVQAEAGGMHTVCLS 63
Query: 322 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 381
K G+V+S+G G LG + S V V+ G+ HT A+T G ++ W
Sbjct: 64 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLW 123
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G N G++G M + V V+ G H ++T+ G L+T G G
Sbjct: 124 GSFRDNNGVIGLLEPM--KKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQ 181
Query: 442 GVLGHGDRISVSTPREVD----------------SLKGLRTVRAACGVWHTAAVVEVMVG 485
G LG + + S +R A CG + T A+
Sbjct: 182 GQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAI------ 235
Query: 486 SSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVS--CGHSLTVAL 543
G ++ +G + +LG E+ +P + + V G TV +
Sbjct: 236 ------SHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCM 289
Query: 544 TTTGHVYTMGSPVYGQLGDP--KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 601
+ G Y++G YG+LG +PT + V +ACG +T V
Sbjct: 290 DSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPA---VSSVACGASVGYAVTKDGRV 346
Query: 602 YTWGKGANGRLGHGDTDDRNFPSLV--EALKDKQVKSIVCGTSFTAAIC 648
+ WG G N +LG G +D P + + L+++ V S+ G T +
Sbjct: 347 FAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLV 395
|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 119 | Back information, alignment and structure |
|---|
| >d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 131 | Back information, alignment and structure |
|---|
| >d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]} Length = 64 | Back information, alignment and structure |
|---|
| >d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 72 | Back information, alignment and structure |
|---|
| >d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88 | Back information, alignment and structure |
|---|
| >d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 67 | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} Length = 273 | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} Length = 273 | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} Length = 273 | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} Length = 273 | Back information, alignment and structure |
|---|
| >d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
| >d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]} Length = 51 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1092 | |||
| d1a12a_ | 401 | Regulator of chromosome condensation RCC1 {Human ( | 100.0 | |
| d1a12a_ | 401 | Regulator of chromosome condensation RCC1 {Human ( | 100.0 | |
| d1jtdb_ | 273 | beta-lactamase inhibitor protein-II, BLIP-II {Stre | 100.0 | |
| d1jtdb_ | 273 | beta-lactamase inhibitor protein-II, BLIP-II {Stre | 99.97 | |
| d1maia_ | 119 | Phospholipase C delta-1 {Rat (Rattus norvegicus) [ | 99.86 | |
| d2zkmx3 | 131 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.74 | |
| d1joca1 | 64 | Eea1 {Human (Homo sapiens) [TaxId: 9606]} | 99.44 | |
| d1wfka_ | 88 | Zinc finger FYVE domain containing protein 19 {Mou | 99.23 | |
| d1dvpa2 | 72 | Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7 | 99.21 | |
| d1vfya_ | 67 | vps27p protein {Baker's yeast (Saccharomyces cerev | 99.19 | |
| d1y02a2 | 51 | Rififylin (FYVE-RING finger protein Sakura) {Human | 98.69 | |
| d1zbdb_ | 124 | Effector domain of rabphilin-3a {Rat (Rattus norve | 97.85 | |
| d1v5ua_ | 117 | SET binding factor 1, Sbf1 {Mouse (Mus musculus) [ | 97.72 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.61 | |
| d1btka_ | 169 | Bruton's tyrosine kinase {Human (Homo sapiens) [Ta | 97.59 | |
| d1faoa_ | 100 | Dual adaptor of phosphotyrosine and 3-phosphoinosi | 97.47 | |
| d1eaza_ | 103 | Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | 97.25 | |
| d1x1ga1 | 116 | Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | 97.2 | |
| d2coaa1 | 112 | Protein kinase c, d2 type {Human (Homo sapiens) [T | 97.2 | |
| d2coda1 | 102 | Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96 | 97.16 | |
| d1u5fa1 | 111 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 97.14 | |
| d1u5da1 | 106 | Src kinase-associated phosphoprotein SKAP55 (SCAP1 | 97.1 | |
| d1x1fa1 | 136 | Signal-transducing adaptor protein 1, STAP-1 {Huma | 97.01 | |
| d1v5pa_ | 126 | Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | 97.01 | |
| d1omwa2 | 119 | G-protein coupled receptor kinase 2 (beta-adrenerg | 96.97 | |
| d1plsa_ | 113 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 96.83 | |
| d1wg7a_ | 150 | Dedicator of cytokinesis protein 9, DOCK9 {Human ( | 96.78 | |
| d2i5fa1 | 104 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 96.69 | |
| d1wi1a_ | 126 | Calcium-dependent activator protein for secretion, | 96.67 | |
| d1v89a_ | 118 | Rho-GTPase-activating protein 25 (KIAA0053) {Human | 96.62 | |
| d1qqga1 | 103 | Insulin receptor substrate 1, IRS-1 {Human (Homo s | 96.57 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 96.57 | |
| d2coca1 | 99 | FYVE, RhoGEF and PH domain containing protein 3, F | 96.52 | |
| d2fjla1 | 101 | Phosphoinositide phospholipase C, PLC-gamma-1 {Rat | 96.46 | |
| d1u5ea1 | 209 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 96.29 | |
| d1upqa_ | 107 | Phosphoinositol 3-phosphate binding protein-1, PEP | 96.27 | |
| d1v5ma_ | 136 | SH2 and PH domain-containing adapter protein APS { | 96.2 | |
| d2cofa1 | 95 | KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | 96.08 | |
| d1w1ha_ | 147 | 3-phosphoinositide dependent protein kinase-1 {Hum | 96.07 | |
| d1wgqa_ | 109 | FYVE, RhoGEF and PH domain containing protein 6, F | 96.06 | |
| d1fgya_ | 127 | Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | 95.49 | |
| d1unqa_ | 118 | Rac-alpha serine/threonine kinase {Human (Homo sap | 95.37 | |
| d1wjma_ | 123 | beta-spectrin {Human (Homo sapiens), brain 2 isofo | 95.15 | |
| d1v88a_ | 130 | Oxysterol binding protein-related protein 8 (ORP-8 | 94.94 | |
| d2elba2 | 101 | DCC-interacting protein 13-alpha, APPL1 {Human (Ho | 94.94 | |
| d2dyna_ | 111 | Dynamin {Human (Homo sapiens) [TaxId: 9606]} | 94.85 | |
| d1v61a_ | 132 | Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [ | 94.61 | |
| d1btna_ | 106 | beta-spectrin {Mouse (Mus musculus), brain [TaxId: | 93.46 | |
| d1droa_ | 122 | beta-spectrin {Fruit fly (Drosophila melanogaster) | 92.66 | |
| d2j59m1 | 133 | Rho GTPase-activating protein 21 {Human (Homo sapi | 91.45 | |
| d2dfka2 | 162 | Rho guanine nucleotide exchange factor 9, Collybis | 91.02 | |
| d1zc3b1 | 109 | Exocyst complex protein EXO84 {Rat (Rattus norvegi | 90.79 | |
| d1ntya2 | 121 | Triple functional domain protein TRIO {Human (Homo | 90.75 | |
| d1txda2 | 114 | Rho guanine nucleotide exchange factor 12 {Human ( | 90.7 | |
| d1xcga2 | 140 | Rho guanine nucleotide exchange factor 11, PDZ-Rho | 90.69 | |
| d1kz7a2 | 147 | Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId | 90.15 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 85.68 | |
| d1ki1b2 | 142 | GEF of intersectin {Human (Homo sapiens) [TaxId: 9 | 84.57 | |
| d1dbha2 | 133 | Son of sevenless-1 (sos-1) {Human (Homo sapiens) [ | 84.24 | |
| d2adza1 | 105 | Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 1 | 84.05 |
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: Regulator of chromosome condensation RCC1 domain: Regulator of chromosome condensation RCC1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-55 Score=507.46 Aligned_cols=369 Identities=27% Similarity=0.419 Sum_probs=312.1
Q ss_pred cccccCCCCcEEEEcCCCCCcccCCCCCcCCccccccccccceEEecccCCCCEEEEEecCceEEEEEcCCeEEEEeCCC
Q 001361 254 GHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 333 (1092)
Q Consensus 254 ~~~~l~~~G~Vy~WG~n~~~GqLG~g~~~~~~~~~~~~~~~~P~~v~~~~~~~I~~Ia~G~~hs~~Lt~dG~Vy~wG~N~ 333 (1092)
|..+++.+|+||+||.|. +||||+|... .+...|.+|+.+ .+|++|+||..|+++|+.+|+||+||.|.
T Consensus 7 h~~~~~~~G~vy~wG~n~-~GqLG~g~~~--------~~~~~P~~v~~~--~~i~~ia~G~~h~~al~~~G~vy~wG~n~ 75 (401)
T d1a12a_ 7 HRSHSTEPGLVLTLGQGD-VGQLGLGENV--------MERKKPALVSIP--EDVVQAEAGGMHTVCLSKSGQVYSFGCND 75 (401)
T ss_dssp CTTCCCCCBEEEEEEECT-TSTTCSCTTC--------CEEEEEEEECCS--SCEEEEEECSSEEEEEETTSCEEEEECCT
T ss_pred EEEEECCCCEEEEEeCCC-CCCCCCCCCC--------ceeccCEEeCCC--CCeEEEEeCCCEEEEEeCCCEEEEEeCCC
Confidence 567899999999999999 9999999642 457788888764 47999999999999999999999999999
Q ss_pred CCccCCCCCCCCCcceEeeccCCCcEEEEEeCCCeEEEEEeCCcEEEeCCccCCCCccCCCCCcceecceeecCCCCCCc
Q 001361 334 GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 413 (1092)
Q Consensus 334 ~GqLG~g~~~~~~~P~~V~~l~~~~I~~Ia~G~~hs~aLT~dG~Vy~wG~n~~~~GqLG~g~~~~~~~P~~v~~~l~~~~ 413 (1092)
+||||++...+...|.+.......+|++|+||..|+++++++|.||+||.+.+..++++.........+.... ....+
T Consensus 76 ~GQLG~g~~~~~~~~~~~~~~~~~~i~~i~~g~~~~~~~~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 153 (401)
T d1a12a_ 76 EGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV--QLDVP 153 (401)
T ss_dssp TSTTCSCCCSTTGGGSCEECCCCSCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEE--CCSSC
T ss_pred CCCCCcccccccccccccccccccceeeecccccceeeccccccceeccccccccccccccCCccccceeeee--ccCCc
Confidence 9999999888877777777777789999999999999999999999999885455555555544333322222 23568
Q ss_pred EEEEEeCCCeEEEEEcCCcEEEeecCCCcccCCCCCc-----------ccccceeee-----cCCCCeEEEEecCCceEE
Q 001361 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-----------SVSTPREVD-----SLKGLRTVRAACGVWHTA 477 (1092)
Q Consensus 414 I~~IscG~~Ht~aLt~dG~Vy~wG~N~~GQLG~g~~~-----------~~~~P~~V~-----~l~~~~I~~VacG~~ht~ 477 (1092)
|++|+||..|+++++.+|++|+||.|.+||||.+... ....|..+. .....+|.+|+||..|++
T Consensus 154 i~~i~~g~~~~~~~~~~g~~~~~G~n~~gqlg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~v~~g~~~~~ 233 (401)
T d1a12a_ 154 VVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTF 233 (401)
T ss_dssp EEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEETTEEE
T ss_pred eeEEEecccceeeeecCCcccccccCCccccCCCCccccccCCccccccccccceeeccccCCCCCceEEEEEecCCeEE
Confidence 9999999999999999999999999999999986432 122344443 233457999999999999
Q ss_pred EEEEeeecCCCCccCCCCeEEEecCCCCCCcCCCCCCcceeeEEecccCC--CCeEEEEeeCcEEEEEecCCcEEEEeCC
Q 001361 478 AVVEVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVE--PNFCQVSCGHSLTVALTTTGHVYTMGSP 555 (1092)
Q Consensus 478 aLte~~~~~s~~~~~~~G~ly~WG~n~~GQLG~g~~~~~~~P~~V~~l~~--~~I~~Ia~G~~htlaLt~dG~Vy~wG~N 555 (1092)
+|+ .+|+||+||.|.+|++|.........+..+..+.. ..|+.|++|..|+++|+.+|+||+||.|
T Consensus 234 ~l~------------~~g~v~~~g~n~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~l~~~g~v~~wG~n 301 (401)
T d1a12a_ 234 AIS------------HEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRA 301 (401)
T ss_dssp EEE------------TTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSSEEEEEETTSCEEEEECC
T ss_pred EEe------------cCCeEeeecccceecccccccccceeccccccccccceeEEEEeeeccceeeeccCCCEEEeccc
Confidence 998 59999999999999999998888888877765543 5699999999999999999999999999
Q ss_pred CCCCCCCCCCCC--ccceeeccccCCCCEEEEEEcCCEEEEEEcCCeEEEEeCCCCCCCCCCCCCCcccCceeee--ccC
Q 001361 556 VYGQLGDPKANG--KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA--LKD 631 (1092)
Q Consensus 556 ~~GQLG~~~~~~--~~P~~v~~~l~~~~I~~Ia~G~~HslaLT~dG~Vy~WG~n~~GQLG~G~~~~~~~P~~V~~--l~~ 631 (1092)
.+||||.+.... ..|..+.. ...|++|+||.+|++||+++|+||+||.|.+||||+|+..+...|++|.. +++
T Consensus 302 ~~gqlG~g~~~~~~~~P~~i~~---~~~i~~Is~G~~hs~alt~dG~v~~WG~n~~GQLG~G~~~~~~~P~~v~~~~~~~ 378 (401)
T d1a12a_ 302 EYGRLGLGEGAEEKSIPTLISR---LPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLEN 378 (401)
T ss_dssp GGGTTCSCTTCCCEEEEEECCS---SSSEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCSCEEEEEECCSTTTTT
T ss_pred ccCccCCCcccccccCCEEcCC---CCCeEEEEeeCCEEEEEeCCCeEEEEecCCCCCCCCCCCCCEecCEEeeccCCCC
Confidence 999999886443 35666653 24699999999999999999999999999999999999999999998864 457
Q ss_pred CceeeEEecCCcceeeeee
Q 001361 632 KQVKSIVCGTSFTAAICLH 650 (1092)
Q Consensus 632 ~~V~~IacG~~~T~al~~~ 650 (1092)
.+|.+|+||.+||++|+.+
T Consensus 379 ~~v~~v~~G~~hs~~l~~d 397 (401)
T d1a12a_ 379 RVVLSVSSGGQHTVLLVKD 397 (401)
T ss_dssp EEEEEEEECSSEEEEEEEE
T ss_pred CEEEEEEEccceEEEEEEC
Confidence 7899999999999999975
|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
| >d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
| >d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
| >d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]} | Back information, alignment and structure |
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| >d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} | Back information, alignment and structure |
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| >d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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| >d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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| >d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2adza1 b.55.1.1 (A:1-43,A:117-178) Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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