Citrus Sinensis ID: 001557
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1054 | 2.2.26 [Sep-21-2011] | |||||||
| O22060 | 1057 | Probable sucrose-phosphat | N/A | no | 0.994 | 0.991 | 0.773 | 0.0 | |
| Q43845 | 1053 | Probable sucrose-phosphat | N/A | no | 0.990 | 0.991 | 0.755 | 0.0 | |
| P31928 | 1056 | Sucrose-phosphate synthas | N/A | no | 0.990 | 0.988 | 0.736 | 0.0 | |
| O04932 | 1054 | Probable sucrose-phosphat | N/A | no | 0.985 | 0.985 | 0.742 | 0.0 | |
| Q43876 | 1059 | Probable sucrose-phosphat | N/A | no | 0.994 | 0.989 | 0.737 | 0.0 | |
| Q94BT0 | 1043 | Sucrose-phosphate synthas | yes | no | 0.981 | 0.992 | 0.720 | 0.0 | |
| P49031 | 1045 | Probable sucrose-phosphat | N/A | no | 0.982 | 0.991 | 0.722 | 0.0 | |
| Q9FY54 | 1047 | Probable sucrose-phosphat | no | no | 0.979 | 0.985 | 0.717 | 0.0 | |
| Q6ZHZ1 | 1066 | Probable sucrose-phosphat | yes | no | 0.980 | 0.969 | 0.684 | 0.0 | |
| O04933 | 1081 | Probable sucrose-phosphat | N/A | no | 0.987 | 0.962 | 0.573 | 0.0 |
| >sp|O22060|SPSA1_CITUN Probable sucrose-phosphate synthase 1 OS=Citrus unshiu GN=SPS1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1692 bits (4382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 820/1060 (77%), Positives = 926/1060 (87%), Gaps = 12/1060 (1%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWI 60
MAGNDW+NSYLEAILDVGPG+DDAKSSLLLRERGRFSPTRYFVE+VITGFDETDLHRSW+
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
Query: 61 RAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMSE 120
+A ATRSPQERNTRLENMCWRIWNLAR+KKQ+EGE AQR AKRRLERERGR+EA+ADMSE
Sbjct: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
Query: 121 DLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIRGE 180
DLSEG+KGD+ ++SAHG STR R+PRISSVD ME W Q K KKLYIVLIS+HGLIRGE
Sbjct: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW+Y EP+EML +N
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN 240
Query: 241 TENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVG 300
+++ M +GESSGAYIIRIPFGPKDKY+ KELLWPHIPEFVD AL HII++S VLGEQ+G
Sbjct: 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300
Query: 301 SGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINT 360
G+P+WPVAIHGHYADAGD+AALLSGALNVPM+FTGHSLGRDKLEQLLKQ RLSRDEIN
Sbjct: 301 GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA 360
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGR 420
TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKR VSC+G+
Sbjct: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420
Query: 421 FMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILA 480
FMPRM +IPPG+EFHHIV +GD+DGE E +E +PASPDPPIWSEIM FF+NPRKP+ILA
Sbjct: 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY 540
LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD IDEMS T+A++LLS+LKLIDKY
Sbjct: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540
Query: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG 600
DLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAA+GLPIVATKNG
Sbjct: 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
Query: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 660
GPVDIHRVLDNGLLVDPHDQQSIADALLKLV+ KQLW RCRQNGLKNIH FSWPEHCK+Y
Sbjct: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVAGKQLWARCRQNGLKNIHLFSWPEHCKTY 660
Query: 661 LSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDN 720
LSRI+ CK R P+WQR+DDG + SESDSPGDS RDI D+SLNLK SL+G+K+ G S D+
Sbjct: 661 LSRIAGCKPRHPQWQRTDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKS-GASGNDD 719
Query: 721 SLDTEENAVTGKNKLENAVLALS------NRTIGGTQKADHNVASGKFPALRRRKYVFVI 774
SLD+E N K++LENAVLA S R G T K D N + KFPALRRRK++FVI
Sbjct: 720 SLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVI 779
Query: 775 AADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAF 834
+ DCD+T+ L+ KK+ EA K+ + G IGF+LST++TI E+HS LVSG LSP FDAF
Sbjct: 780 SVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAF 839
Query: 835 ICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEE 894
ICNSGS+LYY + ++ED PF+VD Y H EYRWGGEGLRKTLVRWA+ V DKK E
Sbjct: 840 ICNSGSDLYYSTLNSEDG---PFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAES 896
Query: 895 G-KIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPV 953
G K++ E ST +CYAF V P M PPVKELRK++RIQALRCHVIYCQNG++++VIPV
Sbjct: 897 GEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRVNVIPV 956
Query: 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGV-GESARKLHA 1012
LASRSQALRYL++RWG++LS +VV GE GDTDYEGLLGGVHKTVILKG+ S+ ++HA
Sbjct: 957 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHA 1016
Query: 1013 NRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLK 1052
NR+Y L DV+ DS N++Q E C + DIR+SLE+LG+LK
Sbjct: 1017 NRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 1056
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Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Citrus unshiu (taxid: 55188) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 4 |
| >sp|Q43845|SPSA_SOLTU Probable sucrose-phosphate synthase OS=Solanum tuberosum GN=SPS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1636 bits (4236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 802/1062 (75%), Positives = 908/1062 (85%), Gaps = 18/1062 (1%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWI 60
MAGNDW+NSYLEAILDVGPG+DD KSSLLLRERGRFSPTRYFVE+VITGFDETDLHRSWI
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDKKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWI 60
Query: 61 RAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMSE 120
RA ATRSPQ RNTRLENMCWRIWNLAR+KKQ+EGE+AQ AKRR ERERGR+EA ADMSE
Sbjct: 61 RAQATRSPQRRNTRLENMCWRIWNLARQKKQLEGEQAQWMAKRRQERERGRREAVADMSE 120
Query: 121 DLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIRGE 180
DLSEG+KGD+ ++S+HG STRGR+PRISSV+TME W Q + KKLYIVLISLHGLIRGE
Sbjct: 121 DLSEGEKGDIVADMSSHGESTRGRLPRISSVETMEAWVSQQRGKKLYIVLISLHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+P+VDW+Y EP+E L +
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPEVDWSYGEPTE-LAPIS 239
Query: 241 TENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVG 300
T+ LM +GESSGAYIIRIPFGP++KY+ KE LWP+IPEFVD AL HIIQ+SKVLGEQ+G
Sbjct: 240 TDGLMTEMGESSGAYIIRIPFGPREKYIPKEQLWPYIPEFVDGALNHIIQMSKVLGEQIG 299
Query: 301 SGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINT 360
SG P+WPVAIHGHYADAGD+AALLSGALNVPM+FTGHSLGRDKLEQLL QGR S+DEIN+
Sbjct: 300 SGYPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLAQGRKSKDEINS 359
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGR 420
TYKIMRRIEAEEL+LDASEIVITSTRQEI+EQWRLYDGFDP+LERKLRARIKR VSC+GR
Sbjct: 360 TYKIMRRIEAEELTLDASEIVITSTRQEIDEQWRLYDGFDPILERKLRARIKRNVSCYGR 419
Query: 421 FMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILA 480
FMPRM VIPPG+EFHHIV H GD+DGE E E +PDPPIW+EIM FFSNPRKPMILA
Sbjct: 420 FMPRMAVIPPGMEFHHIVPHEGDMDGETEGSEDG-KTPDPPIWAEIMRFFSNPRKPMILA 478
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY 540
LARPDPKKN+TTLVKAFGECRPLR+LANLTLIMGNRD+IDEMS TN+ALLLSILK+IDKY
Sbjct: 479 LARPDPKKNLTTLVKAFGECRPLRDLANLTLIMGNRDNIDEMSSTNSALLLSILKMIDKY 538
Query: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG 600
DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLP+VATKNG
Sbjct: 539 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATKNG 598
Query: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 660
GPVDIHRVLDNGLLVDPHDQQ+IADALLKLV+DKQLW +CR NGLKNIH FSWPEHCK+Y
Sbjct: 599 GPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAKCRANGLKNIHLFSWPEHCKTY 658
Query: 661 LSRISSCKQRQPRWQRS-DDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLD 719
LSRI+SCK RQPRW RS DD +NSE+DSP DS RDIHD+SLNL+ SL+G+KN+ D
Sbjct: 659 LSRIASCKPRQPRWLRSIDDDDENSETDSPSDSLRDIHDISLNLRFSLDGEKNDNKENAD 718
Query: 720 NSLDTEENAVTGKNKLENAVLALSNRTIGGTQ------KADHNVASGKFPALRRRKYVFV 773
N+LD E ++KLENAVL+LS + T KAD N +GKFPA+RRR+++FV
Sbjct: 719 NTLDPE----VRRSKLENAVLSLSKGALKSTSKSWSSDKADQNPGAGKFPAIRRRRHIFV 774
Query: 774 IAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDA 833
IA DCD +S +KK+ EA K+ + G IGF+L+T+ I E+ S L+S G++P FDA
Sbjct: 775 IAVDCDASSGLSGSVKKIFEAVEKERAEGSIGFILATSFNISEVQSFLLSEGMNPTDFDA 834
Query: 834 FICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGE 893
+ICNSG +LYY S +E N PF+VDL Y H EYRWGGEGLRKTLVRWAAS+ DK GE
Sbjct: 835 YICNSGGDLYYSSFHSEQN---PFVVDLYYHSHIEYRWGGEGLRKTLVRWAASIIDKNGE 891
Query: 894 EG-KIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIP 952
G IV EDE S +CY F+V P +PP KELRK+MRIQALRCH +YCQNG++++VIP
Sbjct: 892 NGDHIVVEDEDNSADYCYTFKVCKPGTVPPSKELRKVMRIQALRCHAVYCQNGSRINVIP 951
Query: 953 VLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKL-H 1011
VLASRSQALRYL++RWG+DLS +VV GE GDTDYEGL+GG+ K VI+KG+ +A L H
Sbjct: 952 VLASRSQALRYLYLRWGMDLSKLVVFVGESGDTDYEGLIGGLRKAVIMKGLCTNASSLIH 1011
Query: 1012 ANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLKG 1053
NRNY L DV+ FDS NVIQ DE C S +IR LEKL VLKG
Sbjct: 1012 GNRNYPLSDVLPFDSPNVIQADEECSSTEIRCLLEKLAVLKG 1053
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|P31928|SPSA_SPIOL Sucrose-phosphate synthase OS=Spinacia oleracea GN=SPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1615 bits (4182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 783/1063 (73%), Positives = 897/1063 (84%), Gaps = 19/1063 (1%)
Query: 1 MAGNDWVNSYLEAILDVG-PGID-------DAKSSLLLRERGRFSPTRYFVEQVITGFDE 52
MAGNDW+NSYLEAILDVG GID A SLLLRERG FSP+RYFVE+VI+GFDE
Sbjct: 1 MAGNDWINSYLEAILDVGGQGIDASTGKTSTAPPSLLLRERGHFSPSRYFVEEVISGFDE 60
Query: 53 TDLHRSWIRAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRK 112
TDLHRSW+RAA+TRSPQERNTRLEN+CWRIWNLARKKKQIEGEEAQR AKR +ERERGR+
Sbjct: 61 TDLHRSWVRAASTRSPQERNTRLENLCWRIWNLARKKKQIEGEEAQRLAKRHVERERGRR 120
Query: 113 EASADMSEDLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLIS 172
EA+ADMSEDLSEG++GD ++ ST+GRM RISSV+ M+NWA +KEKKLY+VLIS
Sbjct: 121 EATADMSEDLSEGERGDTVADMLFASESTKGRMRRISSVEMMDNWANTFKEKKLYVVLIS 180
Query: 173 LHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEP 232
LHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAP VDW+Y EP
Sbjct: 181 LHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPGVDWSYGEP 240
Query: 233 SEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQIS 292
+EML+ +N+EN + LGESSGAYIIRIPFGPKDKYV KELLWP+IPEFVD AL+HI Q+S
Sbjct: 241 TEMLSSRNSENSTEQLGESSGAYIIRIPFGPKDKYVAKELLWPYIPEFVDGALSHIKQMS 300
Query: 293 KVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGR 352
KVLGEQ+G G P+WP ++HGHYADAGD+AALLSGALNVPMVFTGHSLGRDKL+QLLKQGR
Sbjct: 301 KVLGEQIGGGLPVWPASVHGHYADAGDSAALLSGALNVPMVFTGHSLGRDKLDQLLKQGR 360
Query: 353 LSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIK 412
LSR+E++ TYKIMRRIEAEEL LDASEIVITSTRQEIEEQW+LY GFD VLERKLRAR++
Sbjct: 361 LSREEVDATYKIMRRIEAEELCLDASEIVITSTRQEIEEQWQLYHGFDLVLERKLRARMR 420
Query: 413 RGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSN 472
RGVSCHGRFMPRM IPPG+EF+HI + D+D +++ + S A+PDP IWSEIM FFSN
Sbjct: 421 RGVSCHGRFMPRMAKIPPGMEFNHIAPEDADMDTDIDGHKESNANPDPVIWSEIMRFFSN 480
Query: 473 PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLS 532
RKPMILALARPDPKKN+TTLVKAFGECRPLRELANLTLI+GNRDDIDEMS T++++L+S
Sbjct: 481 GRKPMILALARPDPKKNLTTLVKAFGECRPLRELANLTLIIGNRDDIDEMSTTSSSVLIS 540
Query: 533 ILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGL 592
ILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGL
Sbjct: 541 ILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGL 600
Query: 593 PIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFS 652
PIVATKNGGPVDI VLDNGLL+DPHDQ+SIADALLKLV+DK LW +CRQNGLKNIH FS
Sbjct: 601 PIVATKNGGPVDIIGVLDNGLLIDPHDQKSIADALLKLVADKHLWTKCRQNGLKNIHLFS 660
Query: 653 WPEHCKSYLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKN 712
WPEHCK+YLSRI+SCK RQP WQR D+G +NS++DS GDS RDI D+SLNLKLSL+ ++
Sbjct: 661 WPEHCKNYLSRIASCKPRQPNWQRIDEGSENSDTDSAGDSLRDIQDISLNLKLSLDAERT 720
Query: 713 EGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYVF 772
EGG++ D+SLD+EE K K+ENAV LS KA +V + KFPA+RRRK +F
Sbjct: 721 EGGNSFDDSLDSEE--ANAKRKIENAVAKLSK----SMDKAQVDVGNLKFPAIRRRKCIF 774
Query: 773 VIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFD 832
VIA DCD TSD L++IK V+ G+ G IGF+LST++T+ E+ SLL SGGL P FD
Sbjct: 775 VIALDCDVTSDLLQVIKTVISIVGEQRPTGSIGFILSTSMTLSEVDSLLDSGGLRPADFD 834
Query: 833 AFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKG 892
AFICNSGSELYYPS+ ++ PF++D DY H +YRWGGEGL KTLV+WAASVN+KKG
Sbjct: 835 AFICNSGSELYYPSTDYSES---PFVLDQDYYSHIDYRWGGEGLWKTLVKWAASVNEKKG 891
Query: 893 EEG-KIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVI 951
E IV DE+ ST HCYAF+V + + PP KELRK+MRIQALRCH IYCQNGT+L+VI
Sbjct: 892 ENAPNIVIADETSSTTHCYAFKVNDFTLAPPAKELRKMMRIQALRCHAIYCQNGTRLNVI 951
Query: 952 PVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLH 1011
PVLASRSQALRYL +RWG++LSN VV GE GDTDYEGLLGGVHKTVILKG+G + H
Sbjct: 952 PVLASRSQALRYLFMRWGVELSNFVVFVGESGDTDYEGLLGGVHKTVILKGIGSNTSNFH 1011
Query: 1012 ANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLKGQ 1054
A R Y +E V+ DS N+ Q C+ DI +L K+G LK Q
Sbjct: 1012 ATRAYPMEHVMPVDSPNMFQTG-GCNIDDISDALSKIGCLKAQ 1053
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Spinacia oleracea (taxid: 3562) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|O04932|SPSA1_CRAPL Probable sucrose-phosphate synthase 1 OS=Craterostigma plantagineum GN=SPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1607 bits (4160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 793/1068 (74%), Positives = 902/1068 (84%), Gaps = 29/1068 (2%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWI 60
MAGNDW+NSYLEAILDVGPGID+AK SLLLRERGRFSPTRYFVE+V++GFDETDLHRSWI
Sbjct: 1 MAGNDWINSYLEAILDVGPGIDEAKGSLLLRERGRFSPTRYFVEEVVSGFDETDLHRSWI 60
Query: 61 RAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMSE 120
RA ATRSPQERNTRLENMCWRIWNLAR+KKQ+E EEAQR AKRRLERERGR+EA ADMSE
Sbjct: 61 RAQATRSPQERNTRLENMCWRIWNLARQKKQLENEEAQRMAKRRLERERGRREAVADMSE 120
Query: 121 DLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIRGE 180
DLSEG+KGD+ + S HG S RGR+PRI+SVDTME W Q K KKLYIVLISLHGLIRGE
Sbjct: 121 DLSEGEKGDIVVDHSHHGESNRGRLPRINSVDTMEAWMNQQKGKKLYIVLISLHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+P+VDW+Y EP+EML +N
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPEVDWSYGEPTEMLPPRN 240
Query: 241 TENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVG 300
+EN+M +GESSG+YI+RIPFGPKDKYV KELLWPHIPEFVD AL HIIQ+SKVLGEQ+G
Sbjct: 241 SENMMDEMGESSGSYIVRIPFGPKDKYVAKELLWPHIPEFVDGALGHIIQMSKVLGEQIG 300
Query: 301 SGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINT 360
+G PIWP AIHGHYADAGD+AALLSGALNVPM+FTGHSLGRDKLEQLL+QGRLSRDEIN+
Sbjct: 301 NGHPIWPAAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLRQGRLSRDEINS 360
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGR 420
TYKIMRRIEAEELSLDASE+VITSTRQEIEEQWRLYDGFDP+LERKLRARIKR VSC+GR
Sbjct: 361 TYKIMRRIEAEELSLDASEMVITSTRQEIEEQWRLYDGFDPILERKLRARIKRNVSCYGR 420
Query: 421 FMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILA 480
FMPRM+VIPPG+EFHHIV H+GD+D E E +E S SPDP IW+EIM FFSNPRKPMILA
Sbjct: 421 FMPRMMVIPPGMEFHHIVPHDGDLDAEPEFNEDS-KSPDPHIWTEIMRFFSNPRKPMILA 479
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY 540
LARPDPKKN+TTLVKAFGEC+PLRELANLTLIMGNRD+IDEMSGTNA++LLSILK+IDKY
Sbjct: 480 LARPDPKKNLTTLVKAFGECKPLRELANLTLIMGNRDNIDEMSGTNASVLLSILKMIDKY 539
Query: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG 600
DLYG VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAA+GLPIVATKNG
Sbjct: 540 DLYGLVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 599
Query: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 660
GPVDIHRVLDNG+LVDPH+Q+SIADALLKLV++K LW +CR NGLKNIH FSWPEHCKSY
Sbjct: 600 GPVDIHRVLDNGILVDPHNQESIADALLKLVAEKHLWAKCRANGLKNIHLFSWPEHCKSY 659
Query: 661 LSRISSCKQRQPRWQRS-DDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNE-----G 714
LS+++SCK RQPRW R+ +D +NSESDSP DS RDI D+SLNLK S +GDKNE G
Sbjct: 660 LSKLASCKPRQPRWLRNEEDDDENSESDSPSDSLRDIQDISLNLKFSFDGDKNESREKGG 719
Query: 715 GSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQ------KADHNVASGKFPALRRR 768
GS D+ +K+ENAVL S G Q K +HN +GKFPALRRR
Sbjct: 720 GSHPDDR----------ASKIENAVLEWSKGVAKGPQRSMSIEKGEHNSNAGKFPALRRR 769
Query: 769 KYVFVIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSP 828
K +FVIA DC ++ E ++KV A + + G +GF+L+T+ I E+ LVS L+P
Sbjct: 770 KIMFVIAVDCKPSAGLSESVRKVFAAVENERAEGSVGFILATSFNISEIRHFLVSEKLNP 829
Query: 829 LAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVN 888
FDAFICNSG +LYY S +EDN PF+VDL Y EYRWGGEGLRKTLVRWAAS+
Sbjct: 830 TDFDAFICNSGGDLYYSSHHSEDN---PFVVDLYYHSQIEYRWGGEGLRKTLVRWAASIT 886
Query: 889 DKKGE-EGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTK 947
DKKGE E ++ EDE S +CY+F+V P ++PPVKE RK+MRIQALRCHV+YCQNG K
Sbjct: 887 DKKGEKEEHVIIEDEETSADYCYSFKVQKPNVVPPVKEARKVMRIQALRCHVVYCQNGNK 946
Query: 948 LHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESA 1007
++VIPVLASR+QALRYL++RWG++LS VV+ GE GDTDYE +LGGVHKTV+L GV +A
Sbjct: 947 INVIPVLASRAQALRYLYLRWGMELSKTVVVVGESGDTDYEEMLGGVHKTVVLSGVCTTA 1006
Query: 1008 RK-LHANRNYSLEDVISFDSHNVIQV-DEACDSYDIRASLEKLGVLKG 1053
LHANR+Y L DV+ FD N+ + +E C S D+RA LE+ G K
Sbjct: 1007 TNLLHANRSYPLADVVCFDDLNIFKTHNEECSSTDLRALLEEHGAFKA 1054
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Craterostigma plantagineum (taxid: 4153) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q43876|SPSA_VICFA Probable sucrose-phosphate synthase OS=Vicia faba GN=SPS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1547 bits (4006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 785/1064 (73%), Positives = 897/1064 (84%), Gaps = 16/1064 (1%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWI 60
MAGNDW+NSYLEAILDVGPG+DDAKSSLLLRERGRFSPTRYFVE+VI GFDETDL+RSW+
Sbjct: 1 MAGNDWLNSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVI-GFDETDLYRSWV 59
Query: 61 RAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMSE 120
RA+++RSPQERNTRLENMCWRIWNLAR+KKQ+E E QR KRRLERERGR+EA+ADMSE
Sbjct: 60 RASSSRSPQERNTRLENMCWRIWNLARQKKQLESEAVQRVNKRRLERERGRREATADMSE 119
Query: 121 DLSEGDKGDVSGELSAHGG--STRGRMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIR 178
DLSEG++GD ++S HGG S + R+PRISS D ME W K KKLYIVLIS+HGLIR
Sbjct: 120 DLSEGERGDPVSDVSTHGGGDSVKSRLPRISSADAMETWVNSQKGKKLYIVLISIHGLIR 179
Query: 179 GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNR 238
GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVDW+Y EP+EML
Sbjct: 180 GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLAP 239
Query: 239 KNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQ 298
+NT+ +GESSGAYIIRIPFGP++KY+ KE LWP+IPEFVD A+ HIIQ+SK LGEQ
Sbjct: 240 RNTDEFGDDMGESSGAYIIRIPFGPRNKYIPKEELWPYIPEFVDGAMGHIIQMSKALGEQ 299
Query: 299 VGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEI 358
+GSG +WPVAIHGHYADAGD+AALLSGALNVPM+FTGHSLGRDKLEQLLKQGRLS DEI
Sbjct: 300 IGSGHAVWPVAIHGHYADAGDSAALLSGALNVPMIFTGHSLGRDKLEQLLKQGRLSTDEI 359
Query: 359 NTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCH 418
N+TYKIMRRIEAEEL+LD +EIVITSTRQEIEEQWRLY+GFDPVLERK+RARI+R VSC+
Sbjct: 360 NSTYKIMRRIEAEELALDGTEIVITSTRQEIEEQWRLYNGFDPVLERKIRARIRRNVSCY 419
Query: 419 GRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMI 478
GR+MPRM VIPPG+EFHHI +GD++ E E PA DPPIWSEIM FFSNPRKP+I
Sbjct: 420 GRYMPRMSVIPPGMEFHHIAPLDGDIETEPEGILDHPAPQDPPIWSEIMRFFSNPRKPVI 479
Query: 479 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 538
LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD IDEMS T++++LLS+LKLID
Sbjct: 480 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSSSVLLSVLKLID 539
Query: 539 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 598
KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLP+VATK
Sbjct: 540 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATK 599
Query: 599 NGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCK 658
NGGPVDIHRVLDNGLL+DPHD++SIADALLKLVS+KQLW +CRQNGLKNIH FSWPEHCK
Sbjct: 600 NGGPVDIHRVLDNGLLIDPHDEKSIADALLKLVSNKQLWAKCRQNGLKNIHLFSWPEHCK 659
Query: 659 SYLSRISSCKQRQPRWQR-SDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGST 717
+YLS+I++CK R P+WQR D G + +SPGDS RDI DLSLNLK SL+G+++ G S
Sbjct: 660 TYLSKIATCKPRHPQWQRSEDGGESSESEESPGDSLRDIQDLSLNLKFSLDGERS-GDSG 718
Query: 718 LDNSLDTEENAVTGKNKLENAVLALS------NRTIGGTQKADHNVASGKFPALRRRKYV 771
DNSLD + NA KLENAVL+ S R G T+K+ N + KFP LR R +
Sbjct: 719 NDNSLDPDGNATDRTTKLENAVLSWSKGISKDTRRGGATEKSGQNSNASKFPPLRSRNRL 778
Query: 772 FVIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAF 831
FVIA DCDTTS LE+IK + EAAG++ + G +GF+LST+LTI E+ S L+SGGLSP F
Sbjct: 779 FVIAVDCDTTSGLLEMIKLIFEAAGEERAEGSVGFILSTSLTISEIQSFLISGGLSPNDF 838
Query: 832 DAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKK 891
DA+ICNSGS+LYYPS ++ED F+ DL + H EYRWGGEGLRKTL+RWA+S+ DKK
Sbjct: 839 DAYICNSGSDLYYPSLNSEDRL---FVGDLYFHSHIEYRWGGEGLRKTLIRWASSITDKK 895
Query: 892 GEEG-KIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHV 950
E +IV E ST +CYAF V M PP+KELRKLMRIQALRCH IYCQNGT+L+V
Sbjct: 896 SENNEQIVSPAEQLSTDYCYAFNVRKAGMAPPLKELRKLMRIQALRCHPIYCQNGTRLNV 955
Query: 951 IPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESA-RK 1009
IPVLASRSQALRYL+VRWG +LS +VV GECGDTDYEGL+GG+HK+VILKGVG A +
Sbjct: 956 IPVLASRSQALRYLYVRWGFELSKMVVFVGECGDTDYEGLVGGLHKSVILKGVGSRAISQ 1015
Query: 1010 LHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLKG 1053
LH NRNY L DV+ DS N++Q E S DI+A LEK+G KG
Sbjct: 1016 LHNNRNYPLSDVMPLDSPNIVQATEGSSSADIQALLEKVGYHKG 1059
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Vicia faba (taxid: 3906) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q94BT0|SPSA1_ARATH Sucrose-phosphate synthase 1 OS=Arabidopsis thaliana GN=SPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1547 bits (4006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 763/1059 (72%), Positives = 898/1059 (84%), Gaps = 24/1059 (2%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSS--LLLRERGRFSPTRYFVEQVITGFDETDLHRS 58
MAGNDWVNSYLEAILDVG G+DDA+SS LLLRERGRF+P+RYFVE+VITG+DETDLHRS
Sbjct: 1 MAGNDWVNSYLEAILDVGQGLDDARSSPSLLLRERGRFTPSRYFVEEVITGYDETDLHRS 60
Query: 59 WIRAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADM 118
W++A ATRSPQERNTRLENMCWRIWNLAR+KKQ E +EAQR AKRRLERE+GR+EA+ADM
Sbjct: 61 WVKAVATRSPQERNTRLENMCWRIWNLARQKKQHEEKEAQRLAKRRLEREKGRREATADM 120
Query: 119 SEDLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIR 178
SE+ SEG+KGD+ ++S HG ST+ R+PRI+S ++ME WA Q K KLY+VLISLHGLIR
Sbjct: 121 SEEFSEGEKGDIISDISTHGESTKPRLPRINSAESMELWASQQKGNKLYLVLISLHGLIR 180
Query: 179 GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNR 238
GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVD++Y EP+EML
Sbjct: 181 GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDYSYGEPTEMLTP 240
Query: 239 KNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQ 298
+++E+ +GESSGAYI+RIPFGPKDKY+ KELLWPHIPEFVD A++HI+Q+S VLGEQ
Sbjct: 241 RDSEDFSDEMGESSGAYIVRIPFGPKDKYIPKELLWPHIPEFVDGAMSHIMQMSNVLGEQ 300
Query: 299 VGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEI 358
VG G+PIWP AIHGHYADAGDA ALLSGALNVPM+ TGHSLGRDKLEQLL+QGRLS++EI
Sbjct: 301 VGVGKPIWPSAIHGHYADAGDATALLSGALNVPMLLTGHSLGRDKLEQLLRQGRLSKEEI 360
Query: 359 NTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCH 418
N+TYKIMRRIE EELSLD SE+VITSTRQEI+EQWRLYDGFDP+LERKLRARIKR VSC+
Sbjct: 361 NSTYKIMRRIEGEELSLDVSEMVITSTRQEIDEQWRLYDGFDPILERKLRARIKRNVSCY 420
Query: 419 GRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMI 478
GRFMPRMV IPPG+EF+HIV H GD++ + + +E P SPDPPIW+EIM FFSN RKPMI
Sbjct: 421 GRFMPRMVKIPPGMEFNHIVPHGGDME-DTDGNEEHPTSPDPPIWAEIMRFFSNSRKPMI 479
Query: 479 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 538
LALARPDPKKNITTLVKAFGECRPLRELANL LIMGNRD IDEMS T++++LLS+LKLID
Sbjct: 480 LALARPDPKKNITTLVKAFGECRPLRELANLALIMGNRDGIDEMSSTSSSVLLSVLKLID 539
Query: 539 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 598
KYDLYGQVAYPKHHKQSDVPDIYRLAAK+KGVFINPA IEPFGLTLIEAAA+GLP+VATK
Sbjct: 540 KYDLYGQVAYPKHHKQSDVPDIYRLAAKSKGVFINPAIIEPFGLTLIEAAAHGLPMVATK 599
Query: 599 NGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCK 658
NGGPVDIHRVLDNGLLVDPHDQQSI++ALLKLV+DK LW +CRQNGLKNIHQFSWPEHCK
Sbjct: 600 NGGPVDIHRVLDNGLLVDPHDQQSISEALLKLVADKHLWAKCRQNGLKNIHQFSWPEHCK 659
Query: 659 SYLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTL 718
+YLSRI+S K R P+WQ SDDG DNSE +SP DS RDI D+SLNLK S +G N
Sbjct: 660 TYLSRITSFKPRHPQWQ-SDDGGDNSEPESPSDSLRDIQDISLNLKFSFDGSGN------ 712
Query: 719 DNSLDTEENAVTGKNKLENAVLALS----NRTIGGTQKADHNVASGKFPALRRRKYVFVI 774
DN ++ E +++ K+K+E AV S +R +G ++++ V SGKFPA+RRRK++ VI
Sbjct: 713 DNYMNQEGSSMDRKSKIEAAVQNWSKGKDSRKMGSLERSE--VNSGKFPAVRRRKFIVVI 770
Query: 775 AADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAF 834
A D D D LE K++++A K+ + G +GF+LST+LTI E+ S LVSGGL+P FDAF
Sbjct: 771 ALDFDGEEDTLEATKRILDAVEKERAEGSVGFILSTSLTISEVQSFLVSGGLNPNDFDAF 830
Query: 835 ICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGE- 893
ICNSGS+L+Y S + ED PF+VD Y H EYRWGGEGLRKTL+RWA+S+N+KK +
Sbjct: 831 ICNSGSDLHYTSLNNEDG---PFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNEKKADN 887
Query: 894 EGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPV 953
+ +IV E ST +CY F V P +PPV+ELRKL+RIQALRCHV+Y QNGT+++VIPV
Sbjct: 888 DEQIVTLAEHLSTDYCYTFTVKKPAAVPPVRELRKLLRIQALRCHVVYSQNGTRINVIPV 947
Query: 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHAN 1013
LASR QALRYL VRWGID++ + V GE GDTDYEGLLGG+HK+V+LKGV SA LHAN
Sbjct: 948 LASRIQALRYLFVRWGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKGVSCSA-CLHAN 1006
Query: 1014 RNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLK 1052
R+Y L DVISF+S+NV+ A D+R +L+KL +LK
Sbjct: 1007 RSYPLTDVISFESNNVVH---ASPDSDVRDALKKLELLK 1042
|
Plays a major role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|P49031|SPSA_BETVU Probable sucrose-phosphate synthase OS=Beta vulgaris GN=SPS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1546 bits (4002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 761/1054 (72%), Positives = 889/1054 (84%), Gaps = 18/1054 (1%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWI 60
MAGNDW+NSYLEAILDVGPG+DDAKSSLLLRERGRFSPTRYFVE+VITGFDETDLHRSW+
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
Query: 61 RAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMSE 120
RA ATRSPQERNTRLENMCWRIWNLAR+KKQ+E EEAQRK KRR+E ERGR+EA+ADMSE
Sbjct: 61 RAQATRSPQERNTRLENMCWRIWNLARQKKQLENEEAQRKTKRRMELERGRREATADMSE 120
Query: 121 DLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIRGE 180
DLSEG+K ++SAHG STR R+PRI+S+D ME W Q KEKKLY+VLISLHGLIRGE
Sbjct: 121 DLSEGEK-----DISAHGDSTRPRLPRINSLDAMETWISQQKEKKLYLVLISLHGLIRGE 175
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVDW+Y EP+EMLN ++
Sbjct: 176 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLNPRD 235
Query: 241 TENLMQG---LGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGE 297
+ +GESSGAYI+RIPFGP+DKY+ KE LWP+IPEFVD AL HI+Q+SKVLGE
Sbjct: 236 SNGFDDDDDEMGESSGAYIVRIPFGPRDKYIAKEELWPYIPEFVDGALNHIVQMSKVLGE 295
Query: 298 QVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDE 357
Q+GSG+ +WPVAIHGHYADAGD+AALLSG LNVPM+ TGHSLGRDKLEQLLKQGR+S+D+
Sbjct: 296 QIGSGETVWPVAIHGHYADAGDSAALLSGGLNVPMLLTGHSLGRDKLEQLLKQGRMSKDD 355
Query: 358 INTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSC 417
IN TYKIMRRIEAEELSLDASEIVITSTRQEIEEQW LYDGFDPVLERKLRAR+KRGVSC
Sbjct: 356 INNTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWHLYDGFDPVLERKLRARMKRGVSC 415
Query: 418 HGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPM 477
+GRFMPRMVVIPPG+EF+HIV H GD+DGE E E P SPDPPIW+EIM FFS PRKPM
Sbjct: 416 YGRFMPRMVVIPPGMEFNHIVPHEGDMDGETEETEEHPTSPDPPIWAEIMRFFSKPRKPM 475
Query: 478 ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLI 537
ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD IDEMS T++++LLS+LKLI
Sbjct: 476 ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSSSVLLSVLKLI 535
Query: 538 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT 597
D+YDLYGQVAYPKHHKQ+DVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAA+GLP+VAT
Sbjct: 536 DQYDLYGQVAYPKHHKQADVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVAT 595
Query: 598 KNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHC 657
KNGGPVDI RVLDNGLLVDPH+QQSIA ALLKLV+DKQLW +C+QNGLKNIH +SWPEH
Sbjct: 596 KNGGPVDIQRVLDNGLLVDPHEQQSIATALLKLVADKQLWTKCQQNGLKNIHLYSWPEHS 655
Query: 658 KSYLSRISSCKQRQPRWQR-SDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGS 716
K+YLSRI+S +QRQP+WQR SD+GLDN E +SP DS RDI D+SLNL++ + +K
Sbjct: 656 KTYLSRIASSRQRQPQWQRSSDEGLDNQEPESPSDSLRDIKDISLNLEVLVRPEKRVKTL 715
Query: 717 TLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYVFVIAA 776
+ L T+ N+ N V + R + K D AS K+PA RRRK ++VIA
Sbjct: 716 KI-LGLMTKANSRMLLCSWSNGVHKML-RKARFSDKVDQ--ASSKYPAFRRRKLIYVIAV 771
Query: 777 DCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 836
D D +I++++ +AAGK+ G IGF+LST+ ++ E+ + L+S G + FDA+IC
Sbjct: 772 DGDYEDGLFDIVRRIFDAAGKEKIEGSIGFILSTSYSMPEIQNYLLSKGFNLHDFDAYIC 831
Query: 837 NSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGE-EG 895
NSGSELYY S ++E+++ + D DY H EYRWGGEGLR+TL+RWAAS+ +K GE E
Sbjct: 832 NSGSELYYSSLNSEESN---IIADSDYHSHIEYRWGGEGLRRTLLRWAASITEKNGENEE 888
Query: 896 KIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLA 955
+++ EDE ST +C+AF++ N +PP KELRK MRIQALRCHVIYCQNG+K++VIPVLA
Sbjct: 889 QVITEDEEVSTGYCFAFKIKNQNKVPPTKELRKSMRIQALRCHVIYCQNGSKMNVIPVLA 948
Query: 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESA-RKLHANR 1014
SRSQALRYL+VRWG++LS +VV GECGDTDYEGLLGGVHKTVILKGV +A R LHANR
Sbjct: 949 SRSQALRYLYVRWGVELSKMVVFVGECGDTDYEGLLGGVHKTVILKGVSNTALRSLHANR 1008
Query: 1015 NYSLEDVISFDSHNVIQVDEACDSYDIRASLEKL 1048
+Y L V+S DS N+ +V + C S +I++ + KL
Sbjct: 1009 SYPLSHVVSLDSPNIGEVSKGCSSSEIQSIVTKL 1042
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Beta vulgaris (taxid: 161934) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q9FY54|SPSA2_ARATH Probable sucrose-phosphate synthase 2 OS=Arabidopsis thaliana GN=SPS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1507 bits (3901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 761/1060 (71%), Positives = 887/1060 (83%), Gaps = 28/1060 (2%)
Query: 1 MAGNDWVNSYLEAILDVGPGI--------DDAKSSLLLRERGRFSPTRYFVEQVITGFDE 52
M GNDWVNSYLEAIL PGI D+KSSLLLRERG FSPTRYFVE+VITGFDE
Sbjct: 1 MVGNDWVNSYLEAILAAEPGIANSKPPGTGDSKSSLLLRERGHFSPTRYFVEEVITGFDE 60
Query: 53 TDLHRSWIRAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRK 112
TDLHRSW++AAATRSPQERNTRLEN+CWRIWNLAR+KKQ+EG+ A+R+AKR ERE+ R+
Sbjct: 61 TDLHRSWVQAAATRSPQERNTRLENLCWRIWNLARQKKQVEGKNAKREAKREREREKARR 120
Query: 113 EASADMSEDLSEGDKGDVSGEL-SAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLI 171
E +A+MSED SEG+K D+ GE+ + +T+GRM RISSVD ENW Q+KEKKLYIVLI
Sbjct: 121 EVTAEMSEDFSEGEKADLPGEIPTPSDNNTKGRMSRISSVDVFENWFAQHKEKKLYIVLI 180
Query: 172 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAE 231
SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQV+APDVD +Y+E
Sbjct: 181 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVTAPDVDSSYSE 240
Query: 232 PSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQI 291
PSEMLN +T+ + Q GESSGAYIIRIPFGPKDKYV KELLWPHIPEFVD AL+HI+QI
Sbjct: 241 PSEMLNPIDTD-IEQENGESSGAYIIRIPFGPKDKYVPKELLWPHIPEFVDRALSHIMQI 299
Query: 292 SKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQG 351
SKVLGEQ+G GQ +WPV+IHGHYADAGD+ ALLSGALNVPMVFTGHSLGRDKLEQLLKQG
Sbjct: 300 SKVLGEQIGGGQQVWPVSIHGHYADAGDSTALLSGALNVPMVFTGHSLGRDKLEQLLKQG 359
Query: 352 RLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 411
R ++EIN+ YKI RRIEAEEL LDASEIVITSTRQE++EQWRLYDGFDPVLERKLRAR+
Sbjct: 360 R-PKEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQWRLYDGFDPVLERKLRARM 418
Query: 412 KRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFS 471
KRGVSC GRFMPRMVVIPPG+EFHHIV H+ D DG D+ +P + DPPIWSEIM FFS
Sbjct: 419 KRGVSCLGRFMPRMVVIPPGMEFHHIVPHDVDADG----DDENPQTADPPIWSEIMRFFS 474
Query: 472 NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLL 531
NPRKPMILALARPDPKKN+ TLVKAFGECRPLRELANLTLIMGNR+DIDE+S TN+++LL
Sbjct: 475 NPRKPMILALARPDPKKNLVTLVKAFGECRPLRELANLTLIMGNRNDIDELSSTNSSVLL 534
Query: 532 SILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYG 591
SILKLIDKYDLYGQVA PKHH+QSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEA A+G
Sbjct: 535 SILKLIDKYDLYGQVAMPKHHQQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAGAHG 594
Query: 592 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQF 651
LP VAT NGGPVDIHRVLDNGLLVDPHDQQ+IADALLKLVSD+QLW RCRQNGL NIH F
Sbjct: 595 LPTVATINGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVSDRQLWGRCRQNGLNNIHLF 654
Query: 652 SWPEHCKSYLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDK 711
SWPEHCK+YL+RI+SCKQR P+WQR + +NS+SDSP DS RDI+D+SLNLKLSL+G+K
Sbjct: 655 SWPEHCKTYLARIASCKQRHPKWQRVE--FENSDSDSPSDSLRDINDISLNLKLSLDGEK 712
Query: 712 NEGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYV 771
+ + +D +LD E+ A K ++E AV L+ ++ T+K D K P L+RRK +
Sbjct: 713 SGSNNGVDTNLDAEDRAAERKAEVEKAVSTLAQKS-KPTEKFD-----SKMPTLKRRKNI 766
Query: 772 FVIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAF 831
FVI+ DC TSD L ++K V++AAG+ +S GFI LST++TI E H+ L+SGGL P F
Sbjct: 767 FVISVDCSATSDLLAVVKTVIDAAGRGSSTGFI---LSTSMTISETHTALLSGGLKPQDF 823
Query: 832 DAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASV-NDK 890
DA IC+SGSELY+ SS +ED LP+ +D DY H E+RWGGE LRKTL+RW +SV K
Sbjct: 824 DAVICSSGSELYFTSSGSEDKTALPYTLDADYHSHIEFRWGGESLRKTLIRWISSVEEKK 883
Query: 891 KGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHV 950
K ++G+I+ EDES ST +C +F+V +P ++PP+KELRKLMR QALRC+ +YCQNG +L+V
Sbjct: 884 KTKKGEILVEDESSSTNYCLSFKVKDPALMPPMKELRKLMRNQALRCNAVYCQNGARLNV 943
Query: 951 IPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKL 1010
IPVLASRSQALRYL VRWGIDLSN+VV G+ GDTDYEGLLGG+HKTVILKG+ R+
Sbjct: 944 IPVLASRSQALRYLLVRWGIDLSNMVVFVGDSGDTDYEGLLGGIHKTVILKGLASDLREQ 1003
Query: 1011 HANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGV 1050
NR+Y +EDV +S N+ + E C I+ +LEKLG+
Sbjct: 1004 PGNRSYPMEDVTPLNSPNITEAKE-CGRDAIKVALEKLGI 1042
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q6ZHZ1|SPSA4_ORYSJ Probable sucrose-phosphate synthase 4 OS=Oryza sativa subsp. japonica GN=SPS4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1503 bits (3890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 741/1082 (68%), Positives = 874/1082 (80%), Gaps = 49/1082 (4%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDA-------------------KSSLLLRERGRFSPTRY 41
MAGNDW+NSYLEAILD G + KSSL+LRERGRFSP RY
Sbjct: 1 MAGNDWINSYLEAILDAGGAAGEISAAAGGGGDGAAATGEKRDKSSLMLRERGRFSPARY 60
Query: 42 FVEQVITGFDETDLHRSWIRAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKA 101
FVE+VI+GFDETDL+++W+R AA RSPQERNTRLENM WRIWNLARKKKQIEGEEA R A
Sbjct: 61 FVEEVISGFDETDLYKTWVRTAAMRSPQERNTRLENMSWRIWNLARKKKQIEGEEASRLA 120
Query: 102 KRRLERERGRKEASADMSEDLSEGDKGD-VSGELSAHGGSTRGRMPRISSVDTMENWAIQ 160
K+RLERE+ R+ A+ADMSEDLSEG+KG+ ++ S H STRGRMPRI S D +E WA Q
Sbjct: 121 KQRLEREKARRYAAADMSEDLSEGEKGENINESSSTHDESTRGRMPRIGSTDAIEAWASQ 180
Query: 161 YKEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQV 220
+K+KKLYIVLIS+HGLIRGENMELGRDSDTGGQVKYVVELARALGS PGVYRVDLLTRQ+
Sbjct: 181 HKDKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSTPGVYRVDLLTRQI 240
Query: 221 SAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEF 280
SAPDVDW+Y EP+EML+ +N+EN +GESSGAYI+RIPFGP+DKY+ KE LWPHI EF
Sbjct: 241 SAPDVDWSYGEPTEMLSPRNSENFGHDMGESSGAYIVRIPFGPRDKYIPKEHLWPHIQEF 300
Query: 281 VDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLG 340
VD AL HI+Q+SKVLGEQVGSGQ +WPV IHGHYADAGD+AALLSGALNVPM+FTGHSLG
Sbjct: 301 VDGALVHIMQMSKVLGEQVGSGQLVWPVVIHGHYADAGDSAALLSGALNVPMIFTGHSLG 360
Query: 341 RDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400
RDKLEQLLKQGR +RDEINT YKIMRRIEAEEL LDASEI+ITSTRQEIE+QW LYDGFD
Sbjct: 361 RDKLEQLLKQGRQTRDEINTIYKIMRRIEAEELCLDASEIIITSTRQEIEQQWGLYDGFD 420
Query: 401 PVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDP 460
+ RKLRARIKRGVSC+GR+MPRM+ +PPG+EF HIV H+ D DGE ++GS S DP
Sbjct: 421 LTMARKLRARIKRGVSCYGRYMPRMIAVPPGMEFSHIVPHDVDQDGEEANEDGS-GSTDP 479
Query: 461 PIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDID 520
PIW++IM FFSNPRKPMILALARPDPKKNITTLVKAFGE R LR LANLTLIMGNRD ID
Sbjct: 480 PIWADIMRFFSNPRKPMILALARPDPKKNITTLVKAFGEHRELRNLANLTLIMGNRDVID 539
Query: 521 EMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPF 580
EMS TN+A+L SILKLIDKYDLYGQVAYPKHHKQS+VPDIYRLAA+TKGVFIN AFIEPF
Sbjct: 540 EMSSTNSAVLTSILKLIDKYDLYGQVAYPKHHKQSEVPDIYRLAARTKGVFINCAFIEPF 599
Query: 581 GLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERC 640
GLTLIEAAAYGLP+VAT+NGGPVDIHRVLDNG+LVDPH+Q IA+AL KLVSDKQLW +C
Sbjct: 600 GLTLIEAAAYGLPMVATRNGGPVDIHRVLDNGILVDPHNQNEIAEALYKLVSDKQLWAQC 659
Query: 641 RQNGLKNIHQFSWPEHCKSYLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLS 700
RQNGLKNIHQFSWPEHCK+YLSR+ + K R PRWQ+SDD + SE+DSPGDS RD+HD+S
Sbjct: 660 RQNGLKNIHQFSWPEHCKNYLSRVGTLKPRHPRWQKSDDATEVSEADSPGDSLRDVHDIS 719
Query: 701 LNLKLSLEGDKNEGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKAD-----H 755
LNLKLSL+ +K+ T+EN+V + LE+AV LS R + +K +
Sbjct: 720 LNLKLSLDSEKS----------STKENSV--RRNLEDAVQKLS-RGVSANRKTESVENME 766
Query: 756 NVASGKFPALRRRKYVFVIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL 815
K+P+LRRRK++ VIA D ++ +EIIK + A+ + +G +GFVLST+ I
Sbjct: 767 ATTGNKWPSLRRRKHIVVIAIDSVQDANLVEIIKNIFVASSNERLSGSVGFVLSTSRAIS 826
Query: 816 ELHSLLVSGGLSPLAFDAFICNSGSELYYPSSSTEDNHG---LPFLVDLDYRFHTEYRWG 872
E+HSLL SGG+ FDAFICNSGS+L YPSS++ED LPF++DLDY EYRWG
Sbjct: 827 EVHSLLTSGGIEATDFDAFICNSGSDLCYPSSNSEDMLSPAELPFMIDLDYHTQIEYRWG 886
Query: 873 GEGLRKTLVRWAASVNDKKGEEGKIV-EEDESRSTIHCYAFEVTNPQMIPPVKELRKLMR 931
GEGLRKTL+ WAA +K E G++V EDE S+ +C +F V N + +PPVKELRK MR
Sbjct: 887 GEGLRKTLICWAA----EKSEGGQVVLVEDEECSSTYCISFRVKNAEAVPPVKELRKTMR 942
Query: 932 IQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLL 991
IQALRCHV+Y +G+KL+VIPVLASRSQALRYL++RWG++LSN+ V+ GE GDTDYEGLL
Sbjct: 943 IQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNMTVVVGESGDTDYEGLL 1002
Query: 992 GGVHKTVILKGVGESA-RKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGV 1050
GGVHKT+ILKG + ++HA R+YSL+DVISFD + + E +++++L++ G+
Sbjct: 1003 GGVHKTIILKGSFNAVPNQVHAARSYSLQDVISFDKPGITSI-EGYGPDNLKSALQQFGI 1061
Query: 1051 LK 1052
LK
Sbjct: 1062 LK 1063
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|O04933|SPSA2_CRAPL Probable sucrose-phosphate synthase 2 OS=Craterostigma plantagineum GN=SPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1222 bits (3163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/1083 (57%), Positives = 789/1083 (72%), Gaps = 42/1083 (3%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKS---SLLLRERGR-----FSPTRYFVEQVITGFDE 52
MAGN+W+N YLEAILD G D S ++GR F+PT+YFVE+V++G DE
Sbjct: 1 MAGNEWINGYLEAILDTGASAIDENSGGGKTAAAQKGRHHDHHFNPTKYFVEEVVSGVDE 60
Query: 53 TDLHRSWIRAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRK 112
+DLHR+WI+ ATR+ +ER++RLENMCWRIW+L RKKKQ+E E+ QR A R+ ERE+GRK
Sbjct: 61 SDLHRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEDLQRLAARKWEREQGRK 120
Query: 113 EASADMSEDLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLIS 172
+ + DMSEDLSEG+KGDV GE S RG + +E W+ KEKKLYIVLIS
Sbjct: 121 DVTEDMSEDLSEGEKGDVMGETPVALDSPRGNKKYHRNFSNLEVWSDSNKEKKLYIVLIS 180
Query: 173 LHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEP 232
LHGL+RGENMELGRDSDTGGQ+KYVVE+ARAL MPGVYRVDL TRQ+S+P+VDW+YAEP
Sbjct: 181 LHGLVRGENMELGRDSDTGGQIKYVVEVARALAKMPGVYRVDLFTRQISSPEVDWSYAEP 240
Query: 233 SEMLNRKNT----------ENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVD 282
+EML+ +T E + LGE SGAYIIRIPFGP+DKY++KELLWPHI EFVD
Sbjct: 241 TEMLSSSSTTAGEAHEPEEEEEEEDLGEGSGAYIIRIPFGPRDKYLRKELLWPHIQEFVD 300
Query: 283 AALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRD 342
AL+HI+ +SK LG+Q+G GQP+WP IHGHYADAGD+AALLSGALNVPMV TGHSLGR+
Sbjct: 301 GALSHIVNMSKALGDQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRN 360
Query: 343 KLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 402
KLEQLLKQGR ++++IN+ Y+IMRRIEAEELSLDA+E+VITST+QEIEEQW LYDGFD
Sbjct: 361 KLEQLLKQGRQTKEDINSMYRIMRRIEAEELSLDAAELVITSTKQEIEEQWGLYDGFDVK 420
Query: 403 LERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIV----RHNGDVDGEVERDEGSPASP 458
LER LRAR +RGV+CHGRFMPRM VIPPG++F ++V GD D + SP S
Sbjct: 421 LERVLRARARRGVNCHGRFMPRMAVIPPGMDFSNVVVPEDGSEGDGDLATLTEATSPRSV 480
Query: 459 DPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDD 518
P IW+++M F +NP KPMILAL+RPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDD
Sbjct: 481 -PAIWADVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDD 539
Query: 519 IDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIE 578
IDEMSG NA++L ++LKLID+YDLYGQVA+PKHHKQSDVP+IYRLA+KTKGVFINPAFIE
Sbjct: 540 IDEMSGGNASVLTTVLKLIDRYDLYGQVAFPKHHKQSDVPEIYRLASKTKGVFINPAFIE 599
Query: 579 PFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWE 638
PFGLTLIEAAA+GLP+VATKNGGPVDIHR L+NGLLVDPHDQ +IA+ALLKLVS+K LW
Sbjct: 600 PFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQDAIANALLKLVSEKNLWN 659
Query: 639 RCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQPRWQRSDDGLDNSE-SDSPGDSWRDIH 697
CR+NGLKNIH FSWPEHC++YL+R+++C+ R P+W ++D LD + DS DS +D+
Sbjct: 660 ECRKNGLKNIHLFSWPEHCRTYLTRVAACRMRHPQW-KTDTPLDETAIDDSLNDSLKDVL 718
Query: 698 DLSLNLKLSLEGDKNEGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKADHNV 757
D+S L+LS++G+K + L E A +++ + + + G Q+
Sbjct: 719 DMS--LRLSVDGEKMSVNESSSVELPGGE-AAELPDQVRRVLNKIKRQDSGPAQREAEGK 775
Query: 758 AS---GKFPALRRRKYVFVIAADC-----DTTSDFLEIIKKVVEAAGKD-NSAGFIGFVL 808
A GK+P LRRR+ +FVIA DC + + I+++V A D + F GF L
Sbjct: 776 AGDVPGKYPMLRRRRKLFVIALDCYDLKGNPDKKMILSIQEIVRAVRLDPQMSRFSGFAL 835
Query: 809 STALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTE 868
STA+ + EL L +G + FDA IC+SGSE+YYP + E++ L +D DY H E
Sbjct: 836 STAMPVAELADFLKAGDVKVNDFDALICSSGSEVYYPGTYGEESGKL--YLDPDYTSHIE 893
Query: 869 YRWGGEGLRKTLVRWAASVNDKKGE-EGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELR 927
YRWGG+GL+KT+ + + D K +E S HC ++ + +P V ++R
Sbjct: 894 YRWGGDGLKKTISKLMNTAEDGKSSVASSPIELVAKSSNSHCLSYAIKDPSKAKKVDDMR 953
Query: 928 KLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDY 987
+ +R++ LRCH++YC+N T + V+P+LASRSQALRYL VRW + ++N+ VI GE GDTDY
Sbjct: 954 QKLRMRGLRCHLMYCRNSTSMQVVPLLASRSQALRYLFVRWRLSVANMYVILGETGDTDY 1013
Query: 988 EGLLGGVHKTVILKGVGE--SARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASL 1045
E L+ G HKT+I++GV E S L +Y +DVI D+ + D+ + I +
Sbjct: 1014 EELISGTHKTLIMRGVVEKGSEELLRTAGSYLRDDVIPQDTPLIAYADKGAKAEHIVETF 1073
Query: 1046 EKL 1048
+L
Sbjct: 1074 RQL 1076
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Craterostigma plantagineum (taxid: 4153) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1054 | ||||||
| 224143187 | 1054 | predicted protein [Populus trichocarpa] | 0.994 | 0.994 | 0.814 | 0.0 | |
| 225446235 | 1052 | PREDICTED: probable sucrose-phosphate sy | 0.992 | 0.994 | 0.787 | 0.0 | |
| 408362897 | 1057 | sucrose phosphate synthase [Malus x dome | 0.995 | 0.992 | 0.802 | 0.0 | |
| 186397273 | 1057 | sucrose phosphate synthase [Pyrus pyrifo | 0.995 | 0.992 | 0.801 | 0.0 | |
| 296084519 | 1032 | unnamed protein product [Vitis vinifera] | 0.979 | 1.0 | 0.783 | 0.0 | |
| 3915023 | 1057 | RecName: Full=Probable sucrose-phosphate | 0.994 | 0.991 | 0.773 | 0.0 | |
| 385282640 | 1057 | sucrose phosphate synthase 1f [Prunus pe | 0.993 | 0.990 | 0.776 | 0.0 | |
| 157313316 | 1057 | sucrose phosphate synthase protein 1 [Pr | 0.993 | 0.990 | 0.775 | 0.0 | |
| 225430334 | 1058 | PREDICTED: probable sucrose-phosphate sy | 0.996 | 0.992 | 0.775 | 0.0 | |
| 157313314 | 1059 | sucrose phosphate synthase protein 2 [Pr | 0.995 | 0.990 | 0.800 | 0.0 |
| >gi|224143187|ref|XP_002324874.1| predicted protein [Populus trichocarpa] gi|222866308|gb|EEF03439.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1779 bits (4608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 863/1059 (81%), Positives = 949/1059 (89%), Gaps = 11/1059 (1%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWI 60
MAGNDW+NSYLEAILDV PGI DAKSSLLLRERGRFSPTRYFVE+VITGFDETDLHRSW+
Sbjct: 1 MAGNDWINSYLEAILDVDPGIVDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWL 60
Query: 61 RAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMSE 120
RAAA RS QERNTRLENMCWRIWNLARKKKQ+EGEEAQR AKR LERERGRKEA+ADMSE
Sbjct: 61 RAAAMRSTQERNTRLENMCWRIWNLARKKKQLEGEEAQRIAKRHLERERGRKEATADMSE 120
Query: 121 DLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIRGE 180
DLSEG+KGDV G+LSAHGGS RGRMPRISSVD MENWA Q+KEKKLYI SLHGLIRGE
Sbjct: 121 DLSEGEKGDVPGDLSAHGGSVRGRMPRISSVDVMENWANQHKEKKLYIRFCSLHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKN 240
NMELGRDSDTGGQVKYVVELARALG+MPGVYRVDLLTRQVSAPDVDW+Y EP+EMLN +
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGTMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLNLIS 240
Query: 241 TENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVG 300
+EN LGESSGAYIIRIPFGPKDKY++KELLWP+IPEFVD AL HI+Q+S VLGEQ+G
Sbjct: 241 SENSTGELGESSGAYIIRIPFGPKDKYIRKELLWPYIPEFVDGALGHIMQMSNVLGEQIG 300
Query: 301 SGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINT 360
G P+WPVAIHGHYADAGD+AALLSGALNVPMVFTGHSLGRDKLEQL+KQGR SR+E+N
Sbjct: 301 GGNPVWPVAIHGHYADAGDSAALLSGALNVPMVFTGHSLGRDKLEQLMKQGRQSREEVNA 360
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGR 420
TYKIMRRIEAEEL+LDASEI+ITST+QEIEEQWRLYDGFDPVLERKLRAR+KRGVSCHGR
Sbjct: 361 TYKIMRRIEAEELTLDASEIIITSTKQEIEEQWRLYDGFDPVLERKLRARVKRGVSCHGR 420
Query: 421 FMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILA 480
FMPR VVIPPG+EFHHI H+GD DGE E+++ PASPDPPIWSEIM FFSNPRKPMILA
Sbjct: 421 FMPRTVVIPPGMEFHHITPHDGDSDGEEEKNKDHPASPDPPIWSEIMRFFSNPRKPMILA 480
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY 540
LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSG NA+ LLS++KL+DKY
Sbjct: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGANASYLLSVIKLVDKY 540
Query: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG 600
DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG
Sbjct: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG 600
Query: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 660
GPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLW RCRQNGLKNIH FSWPEHCK+Y
Sbjct: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWARCRQNGLKNIHLFSWPEHCKAY 660
Query: 661 LSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDN 720
L+RI SCK RQP+WQ+ ++G NSESDSPGDS RDI DLSLNLKLSL+G+KN G LDN
Sbjct: 661 LARIVSCKPRQPQWQKIEEGFQNSESDSPGDSLRDIQDLSLNLKLSLDGEKN-GSGNLDN 719
Query: 721 SLDTEENAVTGKNKLENAVLALSNRTIGGTQK------ADHNVASGKFPALRRRKYVFVI 774
SLD E+NAV GK KLENAVL +S GG QK AD+N +S KFP+LRRRK++FVI
Sbjct: 720 SLDNEDNAVDGKYKLENAVLTVSKGAGGGLQKDGAKERADNNTSSSKFPSLRRRKHIFVI 779
Query: 775 AADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAF 834
A DCDTTSDFLEI+K VVE A +NSAG IGF+LSTA+TI E++SLL SGGL+PL FDAF
Sbjct: 780 AVDCDTTSDFLEILKMVVEVA-NENSAGLIGFILSTAMTISEINSLLNSGGLNPLDFDAF 838
Query: 835 ICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEE 894
ICNSGS LYYPSSS++ + GLPF++DLDY EYRWGGEGLRKTLVRWA SVNDK G +
Sbjct: 839 ICNSGSNLYYPSSSSD-DSGLPFVLDLDYHSQIEYRWGGEGLRKTLVRWAISVNDKNG-Q 896
Query: 895 GKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVL 954
GKIVEEDE RS+ +C+A +V + +IPPVKELRKLMRIQALRCHVIYCQ G K++VIPVL
Sbjct: 897 GKIVEEDEPRSSSYCFALKVKDLSLIPPVKELRKLMRIQALRCHVIYCQQGAKINVIPVL 956
Query: 955 ASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANR 1014
ASRSQALRYL+VRWG DLSN+V+ GECGDTDYEGLLGG+HKTV+LKGVG S+ KLHANR
Sbjct: 957 ASRSQALRYLYVRWGTDLSNIVLFTGECGDTDYEGLLGGLHKTVVLKGVGSSSLKLHANR 1016
Query: 1015 NYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLKG 1053
+Y LEDV FD+ N +Q C++ DI+ SLEKLG+LKG
Sbjct: 1017 SYPLEDVAPFDNPNFVQAG-GCNAEDIKESLEKLGILKG 1054
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446235|ref|XP_002265473.1| PREDICTED: probable sucrose-phosphate synthase 1 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1731 bits (4483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 834/1059 (78%), Positives = 938/1059 (88%), Gaps = 13/1059 (1%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWI 60
MAGNDW+NSYLEAILDVGPG+DDAK+SLLLRERGRFSPTRYFVEQVITGFDETDLHRSW+
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKTSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWV 60
Query: 61 RAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMSE 120
RAAATRSPQERNTRLENMCWRIWNLAR+KKQ+EGEEAQR AKRRLER+RGR+EA ADMSE
Sbjct: 61 RAAATRSPQERNTRLENMCWRIWNLARQKKQLEGEEAQRIAKRRLERDRGRREAIADMSE 120
Query: 121 DLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIRGE 180
DLSEG+KGD ++SAHG S RGRMPRISSVD ME W K KKLYIVLISLHGLIRGE
Sbjct: 121 DLSEGEKGDTVSDISAHGDSIRGRMPRISSVDAMETWVSYQKGKKLYIVLISLHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+P+VDW+Y EP+EML N
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPEVDWSYGEPTEMLTPLN 240
Query: 241 TENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVG 300
+E+ M+ +GESSG+YIIRIPFGPKDKYV+KELLWP+IPEFVD AL HIIQ+SKVLGEQ+G
Sbjct: 241 SESFMEDMGESSGSYIIRIPFGPKDKYVEKELLWPYIPEFVDGALNHIIQMSKVLGEQIG 300
Query: 301 SGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINT 360
GQP+WPVAIHGHYADAGD+AALLSGALNVPM+FTGHSLGRDKLEQLLKQGR+SRDEINT
Sbjct: 301 DGQPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRISRDEINT 360
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGR 420
TYKIMRRIEAEEL+LDASEIVITSTRQEIE+QWRLYDGFDP+LERKLRARI+R VSC+GR
Sbjct: 361 TYKIMRRIEAEELALDASEIVITSTRQEIEQQWRLYDGFDPILERKLRARIRRNVSCYGR 420
Query: 421 FMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILA 480
FMPRMV+IPPG+EFHHIV H+GD+DGE E +E P +PDP IWSEIM FF+NPRKPMILA
Sbjct: 421 FMPRMVIIPPGMEFHHIVPHDGDMDGETEGNEDHPRTPDPVIWSEIMRFFTNPRKPMILA 480
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY 540
LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD IDEMS T+A++LLSILKLIDKY
Sbjct: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSILKLIDKY 540
Query: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG 600
DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT+NG
Sbjct: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATRNG 600
Query: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 660
GPVDIHRVLDNGLLVDPHDQQSIADALLKLV+DKQLW +CRQNGLKNIH FSWPEHCK+Y
Sbjct: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVADKQLWAKCRQNGLKNIHLFSWPEHCKTY 660
Query: 661 LSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDN 720
L++I+SCK R P+WQR+DDG +NS++DSPGDS RDI D+SLNLK SL+G KNE +N
Sbjct: 661 LTKIASCKPRHPQWQRTDDGTENSDTDSPGDSLRDIQDISLNLKFSLDGHKNEASGNPEN 720
Query: 721 SLDTEENAVTGKNKLENAVLALS------NRTIGGTQKADHNVASGKFPALRRRKYVFVI 774
S +ENAV GK+KLENAVL S R G T+K+D N +GKFPALRRRK++FVI
Sbjct: 721 S---DENAVDGKSKLENAVLTWSKGFVRDTRKAGFTEKSDQNTGTGKFPALRRRKHIFVI 777
Query: 775 AADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAF 834
A DCDT +D LE K++EA GK+ + G +GF+LST+++I E+HS LVSGGLSP FDAF
Sbjct: 778 AVDCDTNTDTLETAGKILEAFGKEKTEGSVGFILSTSMSISEVHSFLVSGGLSPSDFDAF 837
Query: 835 ICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEE 894
+CNSGS+LYY S ++ED+ PF++DL Y H EYRWGGEGLRK+LVRW AS+NDK +
Sbjct: 838 VCNSGSDLYYSSLTSEDS---PFVLDLYYHSHIEYRWGGEGLRKSLVRWTASINDKMADN 894
Query: 895 GKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVL 954
+IV E+E T +CYAF+V P M+PPVKELRKLMRI ALRCHVIYCQNGTKL+VIP++
Sbjct: 895 ERIVVENEQVLTEYCYAFKVQKPGMVPPVKELRKLMRIHALRCHVIYCQNGTKLNVIPIM 954
Query: 955 ASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANR 1014
ASRSQALRYL+VRWG+DLSN+VV GE GDTDYEGLLGGVHKTVILKGV S +LHANR
Sbjct: 955 ASRSQALRYLYVRWGVDLSNIVVFVGESGDTDYEGLLGGVHKTVILKGVCAS-NQLHANR 1013
Query: 1015 NYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLKG 1053
Y L DV+ FDS N++Q+ E C DIR+SLEK+GVLKG
Sbjct: 1014 TYPLTDVVPFDSPNIVQMTEDCSGSDIRSSLEKVGVLKG 1052
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|408362897|gb|AFU56880.1| sucrose phosphate synthase [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 1714 bits (4438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 850/1059 (80%), Positives = 933/1059 (88%), Gaps = 10/1059 (0%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWI 60
MAGNDWVNSYLEAILDVGPG+DDAKSSLLLRERGRFSPTRYFVE+VIT +DETDLHRSW+
Sbjct: 1 MAGNDWVNSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITRYDETDLHRSWV 60
Query: 61 RAAAT-RSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMS 119
RAAAT RSP+ERNTRLENMCWRIWNLARKKKQIEGEEAQR A+ RLERERGR+EA+ DMS
Sbjct: 61 RAAATARSPEERNTRLENMCWRIWNLARKKKQIEGEEAQRMARHRLERERGRREATEDMS 120
Query: 120 EDLSEGDKGDVSGELSAHGG-STRG-RMPRISSVDTMENWAIQYKEKKLYIVLISLHGLI 177
EDLSEG+KGD G++SAHGG STRG RM RI+S D +ENW Q KE+K Y+VLISLHGLI
Sbjct: 121 EDLSEGEKGDTVGDISAHGGDSTRGGRMKRINSTDAVENWTSQQKEQKFYMVLISLHGLI 180
Query: 178 RGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLN 237
RGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQV+APDVDW+Y EP+EMLN
Sbjct: 181 RGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVAAPDVDWSYGEPTEMLN 240
Query: 238 RKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGE 297
NTEN + LGESSGAYI+RIPFGP+DKYV KELLWPHIPEFVD ALTHI+Q+SK LGE
Sbjct: 241 PLNTENSKEELGESSGAYIVRIPFGPRDKYVPKELLWPHIPEFVDGALTHILQMSKALGE 300
Query: 298 QVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDE 357
Q+G GQP+WPVAIHGHYADAGD+AALLSGALNVPMVFTGHSLGRDKLEQLLKQGR SR+E
Sbjct: 301 QIGGGQPVWPVAIHGHYADAGDSAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRQSREE 360
Query: 358 INTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSC 417
INTTYKIMRRIEAEEL+LDASEIVITSTRQEIE QWRLYDGFDP+LERKLRARIKRGVSC
Sbjct: 361 INTTYKIMRRIEAEELTLDASEIVITSTRQEIESQWRLYDGFDPILERKLRARIKRGVSC 420
Query: 418 HGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPM 477
+GRFMPRMVVIPPG+EFHHI+ H+GD DGE ER + S SPDPPIWSEIM FF+NPRKPM
Sbjct: 421 YGRFMPRMVVIPPGMEFHHIIPHDGDGDGEGERHDDSSTSPDPPIWSEIMRFFTNPRKPM 480
Query: 478 ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLI 537
ILALAR DPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMS TNA++LLSILKLI
Sbjct: 481 ILALARADPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSTNASVLLSILKLI 540
Query: 538 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT 597
D+YDLYG VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAA+GLPIVAT
Sbjct: 541 DRYDLYGHVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT 600
Query: 598 KNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHC 657
+NGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLW RCRQNGLKNIH FSWPEHC
Sbjct: 601 QNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWARCRQNGLKNIHLFSWPEHC 660
Query: 658 KSYLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGST 717
K+YL+RI+SCK RQP+WQR++ DNS+ DSP DS RDI D+SLNLKLSL+GDK EG +
Sbjct: 661 KTYLTRITSCKPRQPQWQRNEADFDNSQPDSPSDSLRDIQDISLNLKLSLDGDKTEGSAA 720
Query: 718 LDNSLDTEENAVTGKNKLENAVLALSN---RTIGGTQKADHNVASGKFPALRRRKYVFVI 774
LDN+L+TE++A GK K +NAVL LS G T+KAD++ +GKFPA R+RKYV+VI
Sbjct: 721 LDNALETEDHAAGGKIKDQNAVLTLSKGVCEKAGSTEKADNSSGAGKFPAFRKRKYVYVI 780
Query: 775 AADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAF 834
A DCDTTS+F EII+KV EA KD AG IGF+LSTAL I E+H+LLVSGGLSP FDAF
Sbjct: 781 AVDCDTTSEFTEIIEKVTEATEKDKDAGPIGFILSTALGISEIHTLLVSGGLSPSQFDAF 840
Query: 835 ICNSGSELYY-PSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGE 893
ICNSG ELYY SSS + GLPF+VDLDYR H EYRWG EGLRKTLVRW A+ N+KKG
Sbjct: 841 ICNSGGELYYPSSSSEDSPSGLPFVVDLDYRSHIEYRWGAEGLRKTLVRWVANFNEKKGS 900
Query: 894 EGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPV 953
E V ED S ST HCYA++V +P +IPPVKELR+L+RIQALRCHVIY QNGT+L+VIPV
Sbjct: 901 E--TVTEDVSASTNHCYAYKVKDPALIPPVKELRRLLRIQALRCHVIYSQNGTRLNVIPV 958
Query: 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHAN 1013
LASRSQALRYL+VRWG++LS VV GE GDTDYEGLLGG+HKTVILKGV ARKLHAN
Sbjct: 959 LASRSQALRYLYVRWGLNLSTAVVFVGESGDTDYEGLLGGLHKTVILKGVSSGARKLHAN 1018
Query: 1014 RNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLK 1052
RNY LE V DS N+ Q E C DIRASL KLG LK
Sbjct: 1019 RNYPLEHVFPDDSPNMAQ-SEGCSQNDIRASLVKLGFLK 1056
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|186397273|dbj|BAG30918.1| sucrose phosphate synthase [Pyrus pyrifolia] | Back alignment and taxonomy information |
|---|
Score = 1712 bits (4435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1059 (80%), Positives = 932/1059 (88%), Gaps = 10/1059 (0%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWI 60
MAGNDWVNSYLEAILDVGPG+DDAKSSLLLRERGRFSPTRYFVE+VIT +DETDLHRSW+
Sbjct: 1 MAGNDWVNSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITRYDETDLHRSWV 60
Query: 61 RAAAT-RSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMS 119
+AAAT RSP+ERNTRLENMCWRIWNLARKKKQIEGEEAQR A+ RLERERGR+EA+ DMS
Sbjct: 61 QAAATARSPEERNTRLENMCWRIWNLARKKKQIEGEEAQRVARHRLERERGRREATEDMS 120
Query: 120 EDLSEGDKGDVSGELSAHGG-STRG-RMPRISSVDTMENWAIQYKEKKLYIVLISLHGLI 177
EDLSEG+KGD G++SAHGG STRG RM RI+S D +ENW Q KE+K IVLISLHGLI
Sbjct: 121 EDLSEGEKGDTVGDISAHGGDSTRGGRMKRINSTDAVENWTSQQKEQKFCIVLISLHGLI 180
Query: 178 RGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLN 237
RGENMELGRDSDT GQVKYVVELARALGSMPGVYRVDLLTRQV+APDVDW+Y EP+EMLN
Sbjct: 181 RGENMELGRDSDTAGQVKYVVELARALGSMPGVYRVDLLTRQVAAPDVDWSYGEPTEMLN 240
Query: 238 RKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGE 297
NTEN + LGESSGAYI+RIPFGP+DKYV KELLWPHIPEFVD ALTHI+Q+SK LGE
Sbjct: 241 PLNTENSKEELGESSGAYIVRIPFGPRDKYVPKELLWPHIPEFVDGALTHILQMSKALGE 300
Query: 298 QVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDE 357
Q+G GQP+WPVAIHGHYADAGD+AALLSGALNVPMVFTGHSLGRDKLEQLLKQGR SR+E
Sbjct: 301 QIGGGQPVWPVAIHGHYADAGDSAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRQSREE 360
Query: 358 INTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSC 417
INTTYKIMRRIEAEEL+LDASEIVITSTRQEI+ QWRLYDGFDP+LERKLRARIKRGVSC
Sbjct: 361 INTTYKIMRRIEAEELTLDASEIVITSTRQEIDSQWRLYDGFDPILERKLRARIKRGVSC 420
Query: 418 HGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPM 477
HGRFMPRMVVIPPG+EFHHI+ H+GD DGE ER + S SPDPPIWSEIM FF+NPRKPM
Sbjct: 421 HGRFMPRMVVIPPGMEFHHIIPHDGDGDGEGERHDDSSTSPDPPIWSEIMRFFTNPRKPM 480
Query: 478 ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLI 537
ILALAR DPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMS TNA++LLSILKLI
Sbjct: 481 ILALARADPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSTNASVLLSILKLI 540
Query: 538 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT 597
D+YDLYG VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAA+GLPIVAT
Sbjct: 541 DRYDLYGHVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT 600
Query: 598 KNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHC 657
+NGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLW RCRQNGLKNIH FSWPEHC
Sbjct: 601 QNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWARCRQNGLKNIHLFSWPEHC 660
Query: 658 KSYLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGST 717
K+YL+RI+SCK RQP+WQR++ DNS+ DSP DS RDI D+SLNLKLSL+GDK EG +
Sbjct: 661 KTYLTRITSCKPRQPQWQRNEADFDNSQHDSPSDSLRDIQDISLNLKLSLDGDKTEGSAA 720
Query: 718 LDNSLDTEENAVTGKNKLENAVLALSN---RTIGGTQKADHNVASGKFPALRRRKYVFVI 774
LDN+L+TE+ A GK K +NAVL LS G T+KAD++ +GKFPA R+RKYV+VI
Sbjct: 721 LDNALETEDRAAGGKIKEQNAVLTLSKGVCEKAGSTEKADNSSGAGKFPAFRKRKYVYVI 780
Query: 775 AADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAF 834
A DCDTTS+F EII+KV EAA K+ AG IGF+LSTAL I E+H+LLVSGGLSP FDAF
Sbjct: 781 AVDCDTTSEFTEIIEKVTEAAAKNKDAGPIGFILSTALGISEIHTLLVSGGLSPSQFDAF 840
Query: 835 ICNSGSELYY-PSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGE 893
ICNSG+ELYY SSS + GLPF+VDLDYR H EYRWG EGLRKTLVRW A+ N+KKG
Sbjct: 841 ICNSGAELYYPSSSSEDSPSGLPFVVDLDYRSHIEYRWGAEGLRKTLVRWVANFNEKKGS 900
Query: 894 EGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPV 953
E V ED S ST HCYA++V +P +IPPV ELR+LMRIQALRCHVIY QNGT+L+VIPV
Sbjct: 901 E--TVTEDVSASTNHCYAYKVKDPALIPPVTELRRLMRIQALRCHVIYSQNGTRLNVIPV 958
Query: 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHAN 1013
LASRSQALRYL+VRWG++LS VV GE GDTDYEGLLGG+HKTVILKGV ARKLHAN
Sbjct: 959 LASRSQALRYLYVRWGLNLSTAVVFVGESGDTDYEGLLGGLHKTVILKGVNSGARKLHAN 1018
Query: 1014 RNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLK 1052
RNY LE V DS N+ Q E C DIRASL KLGVLK
Sbjct: 1019 RNYPLEHVFPDDSPNMAQ-SEGCSQNDIRASLVKLGVLK 1056
|
Source: Pyrus pyrifolia Species: Pyrus pyrifolia Genus: Pyrus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296084519|emb|CBI25540.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1712 bits (4435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 825/1053 (78%), Positives = 928/1053 (88%), Gaps = 21/1053 (1%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWI 60
MAGNDW+NSYLEAILDVGPG+DDAK+SLLLRERGRFSPTRYFVEQVITGFDETDLHRSW+
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKTSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWV 60
Query: 61 RAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMSE 120
RAAATRSPQERNTRLENMCWRIWNLAR+KKQ+EGEEAQR AKRRLER+RGR+EA ADMSE
Sbjct: 61 RAAATRSPQERNTRLENMCWRIWNLARQKKQLEGEEAQRIAKRRLERDRGRREAIADMSE 120
Query: 121 DLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIRGE 180
DLSEG+KGD ++SAHG S RGRMPRISSVD ME W K KKLYIVLISLHGLIRGE
Sbjct: 121 DLSEGEKGDTVSDISAHGDSIRGRMPRISSVDAMETWVSYQKGKKLYIVLISLHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+P+VDW+Y EP+EML N
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPEVDWSYGEPTEMLTPLN 240
Query: 241 TENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVG 300
+E+ M+ +GESSG+YIIRIPFGPKDKYV+KELLWP+IPEFVD AL HIIQ+SKVLGEQ+G
Sbjct: 241 SESFMEDMGESSGSYIIRIPFGPKDKYVEKELLWPYIPEFVDGALNHIIQMSKVLGEQIG 300
Query: 301 SGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINT 360
GQP+WPVAIHGHYADAGD+AALLSGALNVPM+FTGHSLGRDKLEQLLKQGR+SRDEINT
Sbjct: 301 DGQPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRISRDEINT 360
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGR 420
TYKIMRRIEAEEL+LDASEIVITSTRQEIE+QWRLYDGFDP+LERKLRARI+R VSC+GR
Sbjct: 361 TYKIMRRIEAEELALDASEIVITSTRQEIEQQWRLYDGFDPILERKLRARIRRNVSCYGR 420
Query: 421 FMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILA 480
FMPRMV+IPPG+EFHHIV H+GD+DGE E +E P +PDP IWSEIM FF+NPRKPMILA
Sbjct: 421 FMPRMVIIPPGMEFHHIVPHDGDMDGETEGNEDHPRTPDPVIWSEIMRFFTNPRKPMILA 480
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY 540
LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD IDEMS T+A++LLSILKLIDKY
Sbjct: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSILKLIDKY 540
Query: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG 600
DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT+NG
Sbjct: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATRNG 600
Query: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 660
GPVDIHRVLDNGLLVDPHDQQSIADALLKLV+DKQLW +CRQNGLKNIH FSWPEHCK+Y
Sbjct: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVADKQLWAKCRQNGLKNIHLFSWPEHCKTY 660
Query: 661 LSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDN 720
L++I+SCK R P+WQR+DDG +NS++DSPGDS RDI D+SLNLK SL+G KNE +N
Sbjct: 661 LTKIASCKPRHPQWQRTDDGTENSDTDSPGDSLRDIQDISLNLKFSLDGHKNEASGNPEN 720
Query: 721 SLDTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYVFVIAADCDT 780
S +ENAV GK G T+K+D N +GKFPALRRRK++FVIA DCDT
Sbjct: 721 S---DENAVDGKT--------------GFTEKSDQNTGTGKFPALRRRKHIFVIAVDCDT 763
Query: 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGS 840
+D LE K++EA GK+ + G +GF+LST+++I E+HS LVSGGLSP FDAF+CNSGS
Sbjct: 764 NTDTLETAGKILEAFGKEKTEGSVGFILSTSMSISEVHSFLVSGGLSPSDFDAFVCNSGS 823
Query: 841 ELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEE 900
+LYY S ++ED+ PF++DL Y H EYRWGGEGLRK+LVRW AS+NDK + +IV E
Sbjct: 824 DLYYSSLTSEDS---PFVLDLYYHSHIEYRWGGEGLRKSLVRWTASINDKMADNERIVVE 880
Query: 901 DESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQA 960
+E T +CYAF+V P M+PPVKELRKLMRI ALRCHVIYCQNGTKL+VIP++ASRSQA
Sbjct: 881 NEQVLTEYCYAFKVQKPGMVPPVKELRKLMRIHALRCHVIYCQNGTKLNVIPIMASRSQA 940
Query: 961 LRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLED 1020
LRYL+VRWG+DLSN+VV GE GDTDYEGLLGGVHKTVILKGV S +LHANR Y L D
Sbjct: 941 LRYLYVRWGVDLSNIVVFVGESGDTDYEGLLGGVHKTVILKGVCAS-NQLHANRTYPLTD 999
Query: 1021 VISFDSHNVIQVDEACDSYDIRASLEKLGVLKG 1053
V+ FDS N++Q+ E C DIR+SLEK+GVLKG
Sbjct: 1000 VVPFDSPNIVQMTEDCSGSDIRSSLEKVGVLKG 1032
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|3915023|sp|O22060.1|SPS1_CITUN RecName: Full=Probable sucrose-phosphate synthase 1; AltName: Full=UDP-glucose-fructose-phosphate glucosyltransferase 1 gi|2588888|dbj|BAA23213.1| sucrose-phosphate synthase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 1692 bits (4382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 820/1060 (77%), Positives = 926/1060 (87%), Gaps = 12/1060 (1%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWI 60
MAGNDW+NSYLEAILDVGPG+DDAKSSLLLRERGRFSPTRYFVE+VITGFDETDLHRSW+
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
Query: 61 RAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMSE 120
+A ATRSPQERNTRLENMCWRIWNLAR+KKQ+EGE AQR AKRRLERERGR+EA+ADMSE
Sbjct: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
Query: 121 DLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIRGE 180
DLSEG+KGD+ ++SAHG STR R+PRISSVD ME W Q K KKLYIVLIS+HGLIRGE
Sbjct: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW+Y EP+EML +N
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN 240
Query: 241 TENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVG 300
+++ M +GESSGAYIIRIPFGPKDKY+ KELLWPHIPEFVD AL HII++S VLGEQ+G
Sbjct: 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300
Query: 301 SGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINT 360
G+P+WPVAIHGHYADAGD+AALLSGALNVPM+FTGHSLGRDKLEQLLKQ RLSRDEIN
Sbjct: 301 GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA 360
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGR 420
TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKR VSC+G+
Sbjct: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420
Query: 421 FMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILA 480
FMPRM +IPPG+EFHHIV +GD+DGE E +E +PASPDPPIWSEIM FF+NPRKP+ILA
Sbjct: 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY 540
LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD IDEMS T+A++LLS+LKLIDKY
Sbjct: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540
Query: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG 600
DLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAA+GLPIVATKNG
Sbjct: 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
Query: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 660
GPVDIHRVLDNGLLVDPHDQQSIADALLKLV+ KQLW RCRQNGLKNIH FSWPEHCK+Y
Sbjct: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVAGKQLWARCRQNGLKNIHLFSWPEHCKTY 660
Query: 661 LSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDN 720
LSRI+ CK R P+WQR+DDG + SESDSPGDS RDI D+SLNLK SL+G+K+ G S D+
Sbjct: 661 LSRIAGCKPRHPQWQRTDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKS-GASGNDD 719
Query: 721 SLDTEENAVTGKNKLENAVLALS------NRTIGGTQKADHNVASGKFPALRRRKYVFVI 774
SLD+E N K++LENAVLA S R G T K D N + KFPALRRRK++FVI
Sbjct: 720 SLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVI 779
Query: 775 AADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAF 834
+ DCD+T+ L+ KK+ EA K+ + G IGF+LST++TI E+HS LVSG LSP FDAF
Sbjct: 780 SVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAF 839
Query: 835 ICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEE 894
ICNSGS+LYY + ++ED PF+VD Y H EYRWGGEGLRKTLVRWA+ V DKK E
Sbjct: 840 ICNSGSDLYYSTLNSEDG---PFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAES 896
Query: 895 G-KIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPV 953
G K++ E ST +CYAF V P M PPVKELRK++RIQALRCHVIYCQNG++++VIPV
Sbjct: 897 GEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRVNVIPV 956
Query: 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGV-GESARKLHA 1012
LASRSQALRYL++RWG++LS +VV GE GDTDYEGLLGGVHKTVILKG+ S+ ++HA
Sbjct: 957 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHA 1016
Query: 1013 NRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLK 1052
NR+Y L DV+ DS N++Q E C + DIR+SLE+LG+LK
Sbjct: 1017 NRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 1056
|
Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|385282640|gb|AFI57907.1| sucrose phosphate synthase 1f [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 1690 bits (4377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 824/1061 (77%), Positives = 930/1061 (87%), Gaps = 14/1061 (1%)
Query: 1 MAGNDWVNSYLEAILDVGPG-IDDAKSSLLLRERGRFSPTRYFVEQVITGFDETDLHRSW 59
MA NDW+NSYLEAILDVGPG +DDAKSSLLLRERG FSPTRYFVE+VITGFDETDLHRSW
Sbjct: 1 MASNDWINSYLEAILDVGPGLVDDAKSSLLLRERGHFSPTRYFVEEVITGFDETDLHRSW 60
Query: 60 IRAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMS 119
+RAAATRSPQERNTRLEN+CWRIWNLAR+KKQ+EGEEAQR AKRR+ERERGR+EA+ADMS
Sbjct: 61 VRAAATRSPQERNTRLENLCWRIWNLARQKKQLEGEEAQRMAKRRIERERGRREATADMS 120
Query: 120 EDLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIRG 179
EDLSEG+KGDV ++SAHG ++R R+PRI+SVDTME W Q K KKLYIVLISLHGLIRG
Sbjct: 121 EDLSEGEKGDVVSDISAHGDNSRARLPRINSVDTMEMWISQQKGKKLYIVLISLHGLIRG 180
Query: 180 ENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRK 239
ENMELGRDSDTGGQVKYVVELARALG+ PGVYRVDLLTRQVS+PDVDW+Y EP+EML
Sbjct: 181 ENMELGRDSDTGGQVKYVVELARALGTTPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPI 240
Query: 240 NTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQV 299
N + + +GESSG+YIIRIPFGPKDKY+ KE LWPHIPEFVD AL HIIQ+SKVLGEQ+
Sbjct: 241 NADGFAEEMGESSGSYIIRIPFGPKDKYIPKEELWPHIPEFVDGALNHIIQMSKVLGEQI 300
Query: 300 GSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEIN 359
G G+P+WPVAIHGHYADAGD+AALLSGALNVPM+FTGHSLGRDKLEQLLKQGRLSRDEIN
Sbjct: 301 GGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRLSRDEIN 360
Query: 360 TTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHG 419
TTYKIMRRIEAEEL+LD+SEIVITSTRQEIEEQWRLYDGFDP+LERKLRARI+R VSC+G
Sbjct: 361 TTYKIMRRIEAEELALDSSEIVITSTRQEIEEQWRLYDGFDPILERKLRARIRRNVSCYG 420
Query: 420 RFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMIL 479
RFMPRMV+IPPG+EFHHIV +GD+DGE E +E P +PDPPIWSEIM FF+NPRKPMIL
Sbjct: 421 RFMPRMVIIPPGMEFHHIVPQDGDMDGETEANEDHPTAPDPPIWSEIMRFFTNPRKPMIL 480
Query: 480 ALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDK 539
ALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD IDEMSGT++++LLS+LKLIDK
Sbjct: 481 ALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSGTSSSVLLSVLKLIDK 540
Query: 540 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 599
+DLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAA+GLPIVATKN
Sbjct: 541 HDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN 600
Query: 600 GGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKS 659
GGPVDIH+VLDNGLLVDPHDQQSIADALLKLV+DKQLW RCRQNGLKNIH FSWPEHCK+
Sbjct: 601 GGPVDIHQVLDNGLLVDPHDQQSIADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKT 660
Query: 660 YLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLD 719
YLSRI+SCK R P+WQRS+DG + SESDSP DS RDI DLSLNLK SL+G+K+ G S D
Sbjct: 661 YLSRIASCKPRHPQWQRSEDGAETSESDSPSDSLRDIQDLSLNLKFSLDGEKS-GTSVND 719
Query: 720 NSLDTEENAVTGKNKLENAVLALS------NRTIGGTQKADHNVASGKFPALRRRKYVFV 773
+S + E N +NK+ENAVLA S R G ++KADHN A GKFP LRRRK++ V
Sbjct: 720 SSSEYEGNTADRRNKIENAVLAWSKGISRDTRKAGFSEKADHNSA-GKFPVLRRRKHLIV 778
Query: 774 IAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDA 833
IA DCDT +D +E +K+ EA GK+ S G +GF+LST+LTI E+ S LVSGGLSP FDA
Sbjct: 779 IAVDCDTITDLIETTRKIFEATGKERSEGSVGFILSTSLTISEISSFLVSGGLSPNDFDA 838
Query: 834 FICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKK-G 892
FICNSGS+LYYPS +E+ PF+VD Y H EYRWGGEGLRKTLVRWA SVNDKK G
Sbjct: 839 FICNSGSDLYYPSIHSEER---PFVVDFYYHSHIEYRWGGEGLRKTLVRWAGSVNDKKTG 895
Query: 893 EEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIP 952
+IV + ST +CYAF+V P +PPVKELRKL+RIQALRCHVIYCQNGT+++VIP
Sbjct: 896 SVEQIVTAADQLSTDYCYAFKVQKPGKVPPVKELRKLLRIQALRCHVIYCQNGTRVNVIP 955
Query: 953 VLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESA-RKLH 1011
VLASRSQALRYL++RWG+DLS VVV+AGECGDTDYEGLLGG+HK+V+LKGV +A +LH
Sbjct: 956 VLASRSQALRYLYLRWGVDLSKVVVLAGECGDTDYEGLLGGLHKSVVLKGVASNAISQLH 1015
Query: 1012 ANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLK 1052
NRNY L DV++ DS N++Q E C S DIR SLEKLGV+K
Sbjct: 1016 TNRNYPLSDVLALDSPNIVQTSEGCGSDDIRVSLEKLGVVK 1056
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|157313316|gb|ABV32551.1| sucrose phosphate synthase protein 1 [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 1689 bits (4373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 823/1061 (77%), Positives = 930/1061 (87%), Gaps = 14/1061 (1%)
Query: 1 MAGNDWVNSYLEAILDVGPG-IDDAKSSLLLRERGRFSPTRYFVEQVITGFDETDLHRSW 59
MA NDW+NSYLEAILDVGPG +DDAKSSLLLRERG FSPTRYFVE+VITGFDETDLHRSW
Sbjct: 1 MASNDWINSYLEAILDVGPGLVDDAKSSLLLRERGHFSPTRYFVEEVITGFDETDLHRSW 60
Query: 60 IRAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMS 119
+RAAATRSPQERNTRLEN+CWRIWNLAR+KKQ+EGEEAQR AKRR+ERERGR+EA+ADMS
Sbjct: 61 VRAAATRSPQERNTRLENLCWRIWNLARQKKQLEGEEAQRMAKRRIERERGRREATADMS 120
Query: 120 EDLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIRG 179
EDLSEG+KGDV ++SAHG ++R R+PRI+SVDTME W Q K KKLYIVLISLHGLIRG
Sbjct: 121 EDLSEGEKGDVVSDISAHGDNSRARLPRINSVDTMEMWISQQKGKKLYIVLISLHGLIRG 180
Query: 180 ENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRK 239
ENMELGRDSDTGGQVKYVVELARALG+ PGVYRVDLLTRQVS+PDVDW+Y EP+EML
Sbjct: 181 ENMELGRDSDTGGQVKYVVELARALGTTPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPI 240
Query: 240 NTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQV 299
N + + +GESSG+YIIRIPFGPKDKY+ KE LWPHIPEFVD AL HIIQ+SKVLGEQ+
Sbjct: 241 NADGFAEEMGESSGSYIIRIPFGPKDKYIPKEELWPHIPEFVDGALNHIIQMSKVLGEQI 300
Query: 300 GSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEIN 359
G G+P+WPVAIHGHYADAGD+AALLSGALNVPM+FTGHSLGRDKLEQLLKQGRLSRDEIN
Sbjct: 301 GGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRLSRDEIN 360
Query: 360 TTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHG 419
TTYKIMRRIEAEEL+LD+SEIVITSTRQEIEEQWRLYDGFDP+LERKLRARI+R VSC+G
Sbjct: 361 TTYKIMRRIEAEELALDSSEIVITSTRQEIEEQWRLYDGFDPILERKLRARIRRNVSCYG 420
Query: 420 RFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMIL 479
RFMPRMV+IPPG+EFHHIV +GD+DGE E +E P +PDPPIWSEIM FF+NPRKPMIL
Sbjct: 421 RFMPRMVIIPPGMEFHHIVPQDGDMDGETEANEDHPTAPDPPIWSEIMRFFTNPRKPMIL 480
Query: 480 ALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDK 539
ALARPDPK+NITTLVKAFGECRPLRELANLTLIMGNRD IDEMSGT++++LLS+LKLIDK
Sbjct: 481 ALARPDPKRNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSGTSSSVLLSVLKLIDK 540
Query: 540 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 599
+DLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAA+GLPIVATKN
Sbjct: 541 HDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN 600
Query: 600 GGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKS 659
GGPVDIH+VLDNGLLVDPHDQQSIADALLKLV+DKQLW RCRQNGLKNIH FSWPEHCK+
Sbjct: 601 GGPVDIHQVLDNGLLVDPHDQQSIADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKT 660
Query: 660 YLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLD 719
YLSRI+SCK R P+WQRS+DG + SESDSP DS RDI DLSLNLK SL+G+K+ G S D
Sbjct: 661 YLSRIASCKPRHPQWQRSEDGAETSESDSPSDSLRDIQDLSLNLKFSLDGEKS-GTSVND 719
Query: 720 NSLDTEENAVTGKNKLENAVLALS------NRTIGGTQKADHNVASGKFPALRRRKYVFV 773
+S + E N +NK+ENAVLA S R G ++KADHN A GKFP LRRRK++ V
Sbjct: 720 SSSEYEGNTADRRNKIENAVLAWSKGISRDTRKAGFSEKADHNSA-GKFPVLRRRKHLIV 778
Query: 774 IAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDA 833
IA DCDT +D +E +K+ EA GK+ S G +GF+LST+LTI E+ S LVSGGLSP FDA
Sbjct: 779 IAVDCDTITDLIETTRKIFEATGKERSEGSVGFILSTSLTISEISSFLVSGGLSPNDFDA 838
Query: 834 FICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKK-G 892
FICNSGS+LYYPS +E+ PF+VD Y H EYRWGGEGLRKTLVRWA SVNDKK G
Sbjct: 839 FICNSGSDLYYPSIHSEER---PFVVDFYYHSHIEYRWGGEGLRKTLVRWAGSVNDKKTG 895
Query: 893 EEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIP 952
+IV + ST +CYAF+V P +PPVKELRKL+RIQALRCHVIYCQNGT+++VIP
Sbjct: 896 SVEQIVTAADQLSTDYCYAFKVQKPGKVPPVKELRKLLRIQALRCHVIYCQNGTRVNVIP 955
Query: 953 VLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESA-RKLH 1011
VLASRSQALRYL++RWG+DLS VVV+AGECGDTDYEGLLGG+HK+V+LKGV +A +LH
Sbjct: 956 VLASRSQALRYLYLRWGVDLSKVVVLAGECGDTDYEGLLGGLHKSVVLKGVASNAISQLH 1015
Query: 1012 ANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLK 1052
NRNY L DV++ DS N++Q E C S DIR SLEKLGV+K
Sbjct: 1016 TNRNYPLSDVLALDSPNIVQTSEGCGSDDIRVSLEKLGVVK 1056
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225430334|ref|XP_002282808.1| PREDICTED: probable sucrose-phosphate synthase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1688 bits (4371), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 821/1059 (77%), Positives = 923/1059 (87%), Gaps = 9/1059 (0%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWI 60
MAGNDW+NSYLEAI+D GP + DAKSSLLLRERG FSPTRYFVE+VITGFDETDLHRSW
Sbjct: 1 MAGNDWLNSYLEAIIDAGPNLGDAKSSLLLRERGHFSPTRYFVEEVITGFDETDLHRSWA 60
Query: 61 RAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMSE 120
RA+ATRSPQERNTRLENMCWRIWNLARKKKQ+EGEEAQR AKR ++ ERGR+EA+ADMSE
Sbjct: 61 RASATRSPQERNTRLENMCWRIWNLARKKKQLEGEEAQRVAKRHIDHERGRREATADMSE 120
Query: 121 DLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIRGE 180
DLSEG+KGD +L A + +G+M RI+S+D MENWA Q+KEKKLYIVLISLHGLIRGE
Sbjct: 121 DLSEGEKGDTVSDLPAQADNFKGQMRRINSIDVMENWASQHKEKKLYIVLISLHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKN 240
NMELGRDSDTGGQVKYVVELARALG+MPGVYRVDLLTRQVSAPDVDW+Y EP+EML+ N
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGTMPGVYRVDLLTRQVSAPDVDWSYGEPAEMLHPVN 240
Query: 241 TENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVG 300
+EN +Q +GESSGAYIIRIPFGPKDKY+ KELLWPHIPEFVD AL HIIQ+SKVLGEQ+G
Sbjct: 241 SENPVQEIGESSGAYIIRIPFGPKDKYISKELLWPHIPEFVDGALVHIIQMSKVLGEQIG 300
Query: 301 SGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINT 360
+GQP+WP+AIHGHYADAGD+AALLSGA+NVPM+FTGHSLGRDKLEQLLKQGR S +EIN
Sbjct: 301 NGQPVWPIAIHGHYADAGDSAALLSGAINVPMLFTGHSLGRDKLEQLLKQGRQSNEEINA 360
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGR 420
TYKI RRIEAEEL+LDASE+VITSTRQEIE+QW LY+GFDPV+ERKLRARI+R VSC GR
Sbjct: 361 TYKITRRIEAEELTLDASEVVITSTRQEIEQQWSLYNGFDPVIERKLRARIRRNVSCLGR 420
Query: 421 FMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILA 480
FMPRMV+IPPG+EFHHI+ +GD+DGE+E P+SPDPPIW+EIM FF+NPRKPMILA
Sbjct: 421 FMPRMVIIPPGMEFHHIIPQDGDMDGEIEGSGADPSSPDPPIWAEIMRFFTNPRKPMILA 480
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY 540
LAR DPKKNITTLVKAFGECR LRELANLTLIMGNRDDIDEMS TNA++L+SILKLIDKY
Sbjct: 481 LARADPKKNITTLVKAFGECRSLRELANLTLIMGNRDDIDEMSSTNASVLISILKLIDKY 540
Query: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG 600
D+YGQVAYPKHHKQS+VP+IY LAAKTKGVFINPAFIEPFGLTLIEAAA+GLPIVATKNG
Sbjct: 541 DMYGQVAYPKHHKQSEVPEIYHLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
Query: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 660
GPVDIHRVLDNGLLVDPHDQQS+A+ALLKLV+DK LW RCRQNGLKNIH FSWPEHCK+Y
Sbjct: 601 GPVDIHRVLDNGLLVDPHDQQSVANALLKLVADKHLWGRCRQNGLKNIHLFSWPEHCKTY 660
Query: 661 LSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDN 720
L+RI+ CKQR P WQ+ DDG ++S SDSPG S RDI D+SLNLKLS+ +KNE TLDN
Sbjct: 661 LARIACCKQRHPEWQKPDDGFESSGSDSPGGSLRDIQDISLNLKLSVGDEKNEVSRTLDN 720
Query: 721 SLDTEENAVTGKNKLENAVLALSNRTIGGTQ------KADHNVASGKFPALRRRKYVFVI 774
LD+EENAV GK+KLENAV + S GTQ K++H++ S K PALR+RKY+FVI
Sbjct: 721 YLDSEENAVDGKSKLENAVSSWSKGVSVGTQKDGSIYKSEHHIGSSKSPALRKRKYIFVI 780
Query: 775 AADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAF 834
A D D T+DFLE IK VVE KD AG +GF+LST+L I E+HSLLVSGGLS FDAF
Sbjct: 781 AVDGDGTTDFLESIKMVVETVRKDKYAGSVGFILSTSLAISEMHSLLVSGGLSHSDFDAF 840
Query: 835 ICNSGSELYYPSSSTEDNH-GLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGE 893
ICNSG+ELYYPSS++ED GLPFL+D DY H EYRWGGE LRKTL+RWAAS D+KG
Sbjct: 841 ICNSGTELYYPSSTSEDGTPGLPFLLDSDYHSHIEYRWGGEDLRKTLLRWAASTTDEKG- 899
Query: 894 EGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPV 953
EG IV ED+S ST HCY F+V P++IP +KELRK MRIQALRCHVIYCQNG KL++IPV
Sbjct: 900 EGPIVSEDKSGSTTHCYVFKVEKPELIPSIKELRKSMRIQALRCHVIYCQNGNKLNIIPV 959
Query: 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHAN 1013
LASRSQALRYLHVRWGIDLS+VVV GE GDTDYEGLLGG+HKTVILKGVG S K HA+
Sbjct: 960 LASRSQALRYLHVRWGIDLSHVVVFVGEHGDTDYEGLLGGLHKTVILKGVGCSVGKHHAH 1019
Query: 1014 RNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLK 1052
R Y LEDV+ FDS N+ Q E C+S IRASL KLGVLK
Sbjct: 1020 RYYPLEDVVPFDSPNITQT-EGCNSNSIRASLGKLGVLK 1057
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|157313314|gb|ABV32550.1| sucrose phosphate synthase protein 2 [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 1676 bits (4340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1061 (80%), Positives = 925/1061 (87%), Gaps = 12/1061 (1%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWI 60
MAGNDWVNSYLEAILDVGPG+DDAKSSLLLRERGRFSPTRYFVE+VIT +DETDLHRSW+
Sbjct: 1 MAGNDWVNSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITRYDETDLHRSWV 60
Query: 61 RAAAT-RSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMS 119
RAAAT RSP+ERNTRLENMCWRIWNLARKKKQ+EGEEAQR +K RLERERGR+EA+ DMS
Sbjct: 61 RAAATARSPEERNTRLENMCWRIWNLARKKKQLEGEEAQRISKWRLERERGRREATEDMS 120
Query: 120 EDLSEGDKGDVSGELSAHGGSTRG-RMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIR 178
EDLSEG+KGD G+LSAH S RG +M RISSVD MENWA Q K+KK YIVLISLHGLIR
Sbjct: 121 EDLSEGEKGDTVGDLSAHSDSNRGGKMRRISSVDAMENWASQQKDKKFYIVLISLHGLIR 180
Query: 179 GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNR 238
GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW+Y EP+EMLN
Sbjct: 181 GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLNP 240
Query: 239 KNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQ 298
N+EN GESSGAYIIRIPFGPKDKY+ KE LWPHIPEFVD AL HIIQ+SK LGEQ
Sbjct: 241 INSENSKDEHGESSGAYIIRIPFGPKDKYIPKENLWPHIPEFVDGALNHIIQMSKALGEQ 300
Query: 299 VGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEI 358
+G+GQP+WPVAIHGHYADAGD+AALLSGALNVPMVFTGHSLGRDKLEQLLKQGR SR+EI
Sbjct: 301 IGAGQPVWPVAIHGHYADAGDSAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRQSREEI 360
Query: 359 NTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCH 418
NTTYKIMRRIEAEEL+LDASEIVITSTRQEIE QWRLYDGFDP+LERKLRARIKRGVSCH
Sbjct: 361 NTTYKIMRRIEAEELTLDASEIVITSTRQEIESQWRLYDGFDPILERKLRARIKRGVSCH 420
Query: 419 GRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMI 478
GRFMPRMVVIPPG+EFHHI+ H+GD DGE ER + S SPDPPIWSEIM FF+NPRKPMI
Sbjct: 421 GRFMPRMVVIPPGMEFHHIIPHDGDADGEGERHDDSSTSPDPPIWSEIMRFFTNPRKPMI 480
Query: 479 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 538
LALAR DPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMS TNA++LLSILKLID
Sbjct: 481 LALARADPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSTNASVLLSILKLID 540
Query: 539 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 598
+YDLYG VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT+
Sbjct: 541 RYDLYGHVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATQ 600
Query: 599 NGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCK 658
NGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLW RCRQNGLKNIH FSWPEHCK
Sbjct: 601 NGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWARCRQNGLKNIHLFSWPEHCK 660
Query: 659 SYLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTL 718
+YLSRI+SCK RQP+WQRSD DNS+SDSP DS RDI D+SLNLKLSL+GDK EG L
Sbjct: 661 TYLSRITSCKPRQPQWQRSDAEFDNSDSDSPSDSLRDIQDISLNLKLSLDGDKTEGTGAL 720
Query: 719 DNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKA------DHNVASGKFPALRRRKYVF 772
DN+L++++ A GK K +N VL LS + G+ KA D+N +GKFP R++KYV
Sbjct: 721 DNALESDDRAAGGKIKEQNTVLTLSKGVLRGSPKAGQAEKEDNNSGAGKFPGFRKKKYVC 780
Query: 773 VIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFD 832
VIA DCDTTS+F EII+KVVEAAGKD G IGF+LSTAL I E+HSLL+SGGLSP FD
Sbjct: 781 VIAVDCDTTSEFTEIIEKVVEAAGKDRDPGSIGFILSTALAISEIHSLLISGGLSPSQFD 840
Query: 833 AFICNSGSEL-YYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKK 891
AFICNSG EL Y SSS + GLPF+VDLDYR H EYRWGGE LRKTLVRW +S N+KK
Sbjct: 841 AFICNSGGELYYPSSSSDDSPSGLPFVVDLDYRSHIEYRWGGECLRKTLVRWVSSFNEKK 900
Query: 892 GEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVI 951
G + V ED S ST HCYA++V + + PPVKELRKLMRIQ LRCHVIY QNG +L+VI
Sbjct: 901 G--AQTVTEDRSVSTNHCYAYKVKDLALTPPVKELRKLMRIQGLRCHVIYSQNGIRLNVI 958
Query: 952 PVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLH 1011
PVLASRSQALRYL+VRWG++LS VV GE GDTDYEGLLGG+H+TVILKGV ARKLH
Sbjct: 959 PVLASRSQALRYLYVRWGLNLSTAVVFVGESGDTDYEGLLGGLHRTVILKGVSCGARKLH 1018
Query: 1012 ANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLK 1052
ANRNYSLEDV DS N+ Q E C +IRASL KLG+LK
Sbjct: 1019 ANRNYSLEDVFPNDSPNMTQ-SEGCSQENIRASLSKLGILK 1058
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1054 | ||||||
| TAIR|locus:2149179 | 1043 | SPS1F "sucrose phosphate synth | 0.981 | 0.992 | 0.694 | 0.0 | |
| TAIR|locus:2184891 | 1047 | SPS2F "sucrose phosphate synth | 0.979 | 0.985 | 0.698 | 0.0 | |
| TAIR|locus:2010647 | 1062 | SPS3F "sucrose phosphate synth | 0.933 | 0.926 | 0.561 | 2.2e-302 | |
| TAIR|locus:2124680 | 1050 | ATSPS4F [Arabidopsis thaliana | 0.651 | 0.654 | 0.597 | 4.9e-283 | |
| TAIR|locus:2155894 | 807 | SUS2 "sucrose synthase 2" [Ara | 0.443 | 0.578 | 0.265 | 1.7e-30 | |
| TAIR|locus:2206865 | 942 | SUS6 "sucrose synthase 6" [Ara | 0.440 | 0.492 | 0.270 | 1.4e-29 | |
| TAIR|locus:2137829 | 809 | SUS3 "AT4G02280" [Arabidopsis | 0.433 | 0.564 | 0.259 | 1.1e-27 | |
| TAIR|locus:2084756 | 808 | SUS4 "AT3G43190" [Arabidopsis | 0.443 | 0.577 | 0.255 | 1.6e-27 | |
| TAIR|locus:2180489 | 808 | SUS1 "AT5G20830" [Arabidopsis | 0.443 | 0.577 | 0.251 | 3.1e-27 | |
| TAIR|locus:2166203 | 836 | SUS5 "sucrose synthase 5" [Ara | 0.453 | 0.571 | 0.251 | 9.2e-27 |
| TAIR|locus:2149179 SPS1F "sucrose phosphate synthase 1F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3812 (1346.9 bits), Expect = 0., P = 0.
Identities = 735/1059 (69%), Positives = 867/1059 (81%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSS--LLLRERGRFSPTRYFVEQVITGFDETDLHRS 58
MAGNDWVNSYLEAILDVG G+DDA+SS LLLRERGRF+P+RYFVE+VITG+DETDLHRS
Sbjct: 1 MAGNDWVNSYLEAILDVGQGLDDARSSPSLLLRERGRFTPSRYFVEEVITGYDETDLHRS 60
Query: 59 WIRAAATRSPQERNTRLENMCWRIWNLARKKKQIEGXXXXXXXXXXXXXXXXXXXXSADM 118
W++A ATRSPQERNTRLENMCWRIWNLAR+KKQ E +ADM
Sbjct: 61 WVKAVATRSPQERNTRLENMCWRIWNLARQKKQHEEKEAQRLAKRRLEREKGRREATADM 120
Query: 119 SEDLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIR 178
SE+ SEG+KGD+ ++S HG ST+ R+PRI+S ++ME WA Q K KLY+VLISLHGLIR
Sbjct: 121 SEEFSEGEKGDIISDISTHGESTKPRLPRINSAESMELWASQQKGNKLYLVLISLHGLIR 180
Query: 179 GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNR 238
GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVD++Y EP+EML
Sbjct: 181 GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDYSYGEPTEMLTP 240
Query: 239 KNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQ 298
+++E+ +GESSGAYI+RIPFGPKDKY+ KELLWPHIPEFVD A++HI+Q+S VLGEQ
Sbjct: 241 RDSEDFSDEMGESSGAYIVRIPFGPKDKYIPKELLWPHIPEFVDGAMSHIMQMSNVLGEQ 300
Query: 299 VGSGQPIWPVAIHGHYXXXXXXXXXXXXXXNVPMVFTGHSLGRDKLEQLLKQGRLSRDEI 358
VG G+PIWP AIHGHY NVPM+ TGHSLGRDKLEQLL+QGRLS++EI
Sbjct: 301 VGVGKPIWPSAIHGHYADAGDATALLSGALNVPMLLTGHSLGRDKLEQLLRQGRLSKEEI 360
Query: 359 NTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCH 418
N+TYKIMRRIE EELSLD SE+VITSTRQEI+EQWRLYDGFDP+LERKLRARIKR VSC+
Sbjct: 361 NSTYKIMRRIEGEELSLDVSEMVITSTRQEIDEQWRLYDGFDPILERKLRARIKRNVSCY 420
Query: 419 GRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMI 478
GRFMPRMV IPPG+EF+HIV H GD++ + + +E P SPDPPIW+EIM FFSN RKPMI
Sbjct: 421 GRFMPRMVKIPPGMEFNHIVPHGGDME-DTDGNEEHPTSPDPPIWAEIMRFFSNSRKPMI 479
Query: 479 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 538
LALARPDPKKNITTLVKAFGECRPLRELANL LIMGNRD IDEMS T++++LLS+LKLID
Sbjct: 480 LALARPDPKKNITTLVKAFGECRPLRELANLALIMGNRDGIDEMSSTSSSVLLSVLKLID 539
Query: 539 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 598
KYDLYGQVAYPKHHKQSDVPDIYRLAAK+KGVFINPA IEPFGLTLIEAAA+GLP+VATK
Sbjct: 540 KYDLYGQVAYPKHHKQSDVPDIYRLAAKSKGVFINPAIIEPFGLTLIEAAAHGLPMVATK 599
Query: 599 NGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCK 658
NGGPVDIHRVLDNGLLVDPHDQQSI++ALLKLV+DK LW +CRQNGLKNIHQFSWPEHCK
Sbjct: 600 NGGPVDIHRVLDNGLLVDPHDQQSISEALLKLVADKHLWAKCRQNGLKNIHQFSWPEHCK 659
Query: 659 SYLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTL 718
+YLSRI+S K R P+WQ SDDG DNSE +SP DS RDI D+SLNLK S +G N
Sbjct: 660 TYLSRITSFKPRHPQWQ-SDDGGDNSEPESPSDSLRDIQDISLNLKFSFDGSGN------ 712
Query: 719 DNSLDTEENAVTGKNKLENAVLALS----NRTIGGTQKADHNVASGKFPALRRRKYVFVI 774
DN ++ E +++ K+K+E AV S +R +G ++++ N SGKFPA+RRRK++ VI
Sbjct: 713 DNYMNQEGSSMDRKSKIEAAVQNWSKGKDSRKMGSLERSEVN--SGKFPAVRRRKFIVVI 770
Query: 775 AADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAF 834
A D D D LE K++++A K+ + G +GF+LST+LTI E+ S LVSGGL+P FDAF
Sbjct: 771 ALDFDGEEDTLEATKRILDAVEKERAEGSVGFILSTSLTISEVQSFLVSGGLNPNDFDAF 830
Query: 835 ICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGE- 893
ICNSGS+L+Y S + ED PF+VD Y H EYRWGGEGLRKTL+RWA+S+N+KK +
Sbjct: 831 ICNSGSDLHYTSLNNEDG---PFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNEKKADN 887
Query: 894 EGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPV 953
+ +IV E ST +CY F V P +PPV+ELRKL+RIQALRCHV+Y QNGT+++VIPV
Sbjct: 888 DEQIVTLAEHLSTDYCYTFTVKKPAAVPPVRELRKLLRIQALRCHVVYSQNGTRINVIPV 947
Query: 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHAN 1013
LASR QALRYL VRWGID++ + V GE GDTDYEGLLGG+HK+V+LKGV SA LHAN
Sbjct: 948 LASRIQALRYLFVRWGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKGVSCSAC-LHAN 1006
Query: 1014 RNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLK 1052
R+Y L DVISF+S+NV+ DS D+R +L+KL +LK
Sbjct: 1007 RSYPLTDVISFESNNVVHASP--DS-DVRDALKKLELLK 1042
|
|
| TAIR|locus:2184891 SPS2F "sucrose phosphate synthase 2F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3811 (1346.6 bits), Expect = 0., P = 0.
Identities = 740/1060 (69%), Positives = 861/1060 (81%)
Query: 1 MAGNDWVNSYLEAILDVGPGI--------DDAKSSLLLRERGRFSPTRYFVEQVITGFDE 52
M GNDWVNSYLEAIL PGI D+KSSLLLRERG FSPTRYFVE+VITGFDE
Sbjct: 1 MVGNDWVNSYLEAILAAEPGIANSKPPGTGDSKSSLLLRERGHFSPTRYFVEEVITGFDE 60
Query: 53 TDLHRSWIRAAATRSPQERNTRLENMCWRIWNLARKKKQIEGXXXXXXXXXXXXXXXXXX 112
TDLHRSW++AAATRSPQERNTRLEN+CWRIWNLAR+KKQ+EG
Sbjct: 61 TDLHRSWVQAAATRSPQERNTRLENLCWRIWNLARQKKQVEGKNAKREAKREREREKARR 120
Query: 113 XXSADMSEDLSEGDKGDVSGEL-SAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLI 171
+A+MSED SEG+K D+ GE+ + +T+GRM RISSVD ENW Q+KEKKLYIVLI
Sbjct: 121 EVTAEMSEDFSEGEKADLPGEIPTPSDNNTKGRMSRISSVDVFENWFAQHKEKKLYIVLI 180
Query: 172 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAE 231
SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQV+APDVD +Y+E
Sbjct: 181 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVTAPDVDSSYSE 240
Query: 232 PSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQI 291
PSEMLN +T+ + Q GESSGAYIIRIPFGPKDKYV KELLWPHIPEFVD AL+HI+QI
Sbjct: 241 PSEMLNPIDTD-IEQENGESSGAYIIRIPFGPKDKYVPKELLWPHIPEFVDRALSHIMQI 299
Query: 292 SKVLGEQVGSGQPIWPVAIHGHYXXXXXXXXXXXXXXNVPMVFTGHSLGRDKLEQLLKQG 351
SKVLGEQ+G GQ +WPV+IHGHY NVPMVFTGHSLGRDKLEQLLKQG
Sbjct: 300 SKVLGEQIGGGQQVWPVSIHGHYADAGDSTALLSGALNVPMVFTGHSLGRDKLEQLLKQG 359
Query: 352 RLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 411
R ++EIN+ YKI RRIEAEEL LDASEIVITSTRQE++EQWRLYDGFDPVLERKLRAR+
Sbjct: 360 R-PKEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQWRLYDGFDPVLERKLRARM 418
Query: 412 KRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFS 471
KRGVSC GRFMPRMVVIPPG+EFHHIV H+ D DG+ DE +P + DPPIWSEIM FFS
Sbjct: 419 KRGVSCLGRFMPRMVVIPPGMEFHHIVPHDVDADGD---DE-NPQTADPPIWSEIMRFFS 474
Query: 472 NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLL 531
NPRKPMILALARPDPKKN+ TLVKAFGECRPLRELANLTLIMGNR+DIDE+S TN+++LL
Sbjct: 475 NPRKPMILALARPDPKKNLVTLVKAFGECRPLRELANLTLIMGNRNDIDELSSTNSSVLL 534
Query: 532 SILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYG 591
SILKLIDKYDLYGQVA PKHH+QSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEA A+G
Sbjct: 535 SILKLIDKYDLYGQVAMPKHHQQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAGAHG 594
Query: 592 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQF 651
LP VAT NGGPVDIHRVLDNGLLVDPHDQQ+IADALLKLVSD+QLW RCRQNGL NIH F
Sbjct: 595 LPTVATINGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVSDRQLWGRCRQNGLNNIHLF 654
Query: 652 SWPEHCKSYLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDK 711
SWPEHCK+YL+RI+SCKQR P+WQR + +NS+SDSP DS RDI+D+SLNLKLSL+G+K
Sbjct: 655 SWPEHCKTYLARIASCKQRHPKWQRVE--FENSDSDSPSDSLRDINDISLNLKLSLDGEK 712
Query: 712 NEGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYV 771
+ + +D +LD E+ A K ++E AV L+ ++ T+K D K P L+RRK +
Sbjct: 713 SGSNNGVDTNLDAEDRAAERKAEVEKAVSTLAQKS-KPTEKFD-----SKMPTLKRRKNI 766
Query: 772 FVIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAF 831
FVI+ DC TSD L ++K V++AAG+ +S GFI LST++TI E H+ L+SGGL P F
Sbjct: 767 FVISVDCSATSDLLAVVKTVIDAAGRGSSTGFI---LSTSMTISETHTALLSGGLKPQDF 823
Query: 832 DAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKK 891
DA IC+SGSELY+ SS +ED LP+ +D DY H E+RWGGE LRKTL+RW +SV +KK
Sbjct: 824 DAVICSSGSELYFTSSGSEDKTALPYTLDADYHSHIEFRWGGESLRKTLIRWISSVEEKK 883
Query: 892 G-EEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHV 950
++G+I+ EDES ST +C +F+V +P ++PP+KELRKLMR QALRC+ +YCQNG +L+V
Sbjct: 884 KTKKGEILVEDESSSTNYCLSFKVKDPALMPPMKELRKLMRNQALRCNAVYCQNGARLNV 943
Query: 951 IPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKL 1010
IPVLASRSQALRYL VRWGIDLSN+VV G+ GDTDYEGLLGG+HKTVILKG+ R+
Sbjct: 944 IPVLASRSQALRYLLVRWGIDLSNMVVFVGDSGDTDYEGLLGGIHKTVILKGLASDLREQ 1003
Query: 1011 HANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGV 1050
NR+Y +EDV +S N+ + E C I+ +LEKLG+
Sbjct: 1004 PGNRSYPMEDVTPLNSPNITEAKE-CGRDAIKVALEKLGI 1042
|
|
| TAIR|locus:2010647 SPS3F "sucrose phosphate synthase 3F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2902 (1026.6 bits), Expect = 2.2e-302, P = 2.2e-302
Identities = 579/1031 (56%), Positives = 742/1031 (71%)
Query: 1 MAGNDWVNSYLEAILDV-GPGIDDAK----SSLLLRER-GR-FSPTRYFVEQVITGFDET 53
MAGN+W+N YLEAILD GI++ + +S+ LRE G+ F+PT+YFVE+V+TG DET
Sbjct: 1 MAGNEWINGYLEAILDSQAQGIEETQQKPQASVNLREGDGQYFNPTKYFVEEVVTGVDET 60
Query: 54 DLHRSWIRAAATRSPQERNTRLENMCWRIWNLARKKKQIEGXXXXXXXXXXXXXXXXXXX 113
DLHR+W++ ATR+ +ERN+RLENMCWRIW+L RKKKQ+E
Sbjct: 61 DLHRTWLKVVATRNSRERNSRLENMCWRIWHLTRKKKQLEWEDSQRIANRRLEREQGRRD 120
Query: 114 XSADMSEDLSEGDKGDVSGELSAHGGSTRGRMPRISSVDTMENWAIQYKEKKLYIVLISL 173
+ D+SEDLSEG+KGD GE+ + R ++ R ++ +E W+ KE +LY+VLISL
Sbjct: 121 ATEDLSEDLSEGEKGDGLGEI-VQPETPRRQLQR--NLSNLEIWSDDKKENRLYVVLISL 177
Query: 174 HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPS 233
HGL+RGENMELG DSDTGGQVKYVVELARAL MPGVYRVDL TRQ+ + +VDW+YAEP+
Sbjct: 178 HGLVRGENMELGSDSDTGGQVKYVVELARALARMPGVYRVDLFTRQICSSEVDWSYAEPT 237
Query: 234 EMLNRKNTENLMQG--LGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQI 291
EML T G GESSGAYIIRIPFGP+DKY+ KE+LWP + EFVD AL HI+ +
Sbjct: 238 EMLT---TAEDCDGDETGESSGAYIIRIPFGPRDKYLNKEILWPFVQEFVDGALAHILNM 294
Query: 292 SKVLGEQVGSGQPIWPVAIHGHYXXXXXXXXXXXXXXNVPMVFTGHSLGRDKLEQLLKQG 351
SKVLGEQ+G G+P+WP IHGHY NVPMV TGHSLGR+KLEQLLKQG
Sbjct: 295 SKVLGEQIGKGKPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQG 354
Query: 352 RLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 411
R S+++IN+TYKI RRIEAEELSLDA+E+VITSTRQEI+EQW LYDGFD LE+ LRAR
Sbjct: 355 RQSKEDINSTYKIKRRIEAEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLEKVLRARA 414
Query: 412 KRGVSCHGRFMPRMVVIPPGIEFHHI-VRHN-----GDVDGEVERDEGSPASPDPPIWSE 465
+RGV+CHGRFMPRM VIPPG++F ++ V+ + GD+ V EGS P IWSE
Sbjct: 415 RRGVNCHGRFMPRMAVIPPGMDFTNVEVQEDTPEGDGDLASLVGGTEGSSPKAVPTIWSE 474
Query: 466 IMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGT 525
+M FF+NP KPMILAL+RPDPKKNITTL+KAFGECRPLRELANLTLIMGNRDDIDE+S
Sbjct: 475 VMRFFTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIDELSSG 534
Query: 526 NAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLI 585
NA++L ++LKLIDKYDLYG VAYPKHHKQSDVPDIYRLAA TKGVFINPA +EPFGLTLI
Sbjct: 535 NASVLTTVLKLIDKYDLYGSVAYPKHHKQSDVPDIYRLAANTKGVFINPALVEPFGLTLI 594
Query: 586 EAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGL 645
EAAA+GLP+VATKNGGPVDIHR L NGLLVDPHDQ++IA+ALLKLVS+K LW CR NG
Sbjct: 595 EAAAHGLPMVATKNGGPVDIHRALHNGLLVDPHDQEAIANALLKLVSEKNLWHECRINGW 654
Query: 646 KNIHQFSWPEHCKSYLSRISSCKQRQPRWQRSDDGLDNSESD-SPGDSWRDIHDLSLNLK 704
KNIH FSWPEHC++YL+RI++C+ R P+WQ D + + + S DS +D+ D+SL +
Sbjct: 655 KNIHLFSWPEHCRTYLTRIAACRMRHPQWQTDADEVAAQDDEFSLNDSLKDVQDMSL--R 712
Query: 705 LSLEGDKNE-GGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFP 763
LS++GDK GS NS D + ++ E S + G +++D N+ S K+P
Sbjct: 713 LSMDGDKPSLNGSLEPNSADPVKQIMSRMRTPE----IKSKPELQGKKQSD-NLGS-KYP 766
Query: 764 ALRRRKYVFVIAADC---DTTSD---FLEIIKKVVEAAGKD-NSAGFIGFVLSTALTILE 816
LRRR+ + V+A DC + D + +I+ +++A D A GF +ST++ + E
Sbjct: 767 VLRRRERLVVLAVDCYDNEGAPDEKAMVPMIQNIIKAVRSDPQMAKNSGFAISTSMPLDE 826
Query: 817 LHSLLVSGGLSPLAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGL 876
L L S + FD IC+SGSE+YYP E+ LP D DY H +YRWG EGL
Sbjct: 827 LTRFLKSAKIQVSEFDTLICSSGSEVYYPGG--EEGKLLP---DPDYSSHIDYRWGMEGL 881
Query: 877 RKTLVRW--AASVNDKKGEEGK--IVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRI 932
+ T+ + +V + +G +++ED++ S HC A+ + + + V +LR+ +R+
Sbjct: 882 KNTVWKLMNTTAVGGEARNKGSPSLIQEDQASSNSHCVAYMIKDRSKVMRVDDLRQKLRL 941
Query: 933 QALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLG 992
+ LRCH +YC+N T++ ++P+LASRSQALRYL VRW ++++N+ V+ G+ GDTDYE L+
Sbjct: 942 RGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMYVVVGDRGDTDYEELIS 1001
Query: 993 GVHKTVILKGV 1003
G HKTVI+KG+
Sbjct: 1002 GTHKTVIVKGL 1012
|
|
| TAIR|locus:2124680 ATSPS4F [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2156 (764.0 bits), Expect = 4.9e-283, Sum P(3) = 4.9e-283
Identities = 430/720 (59%), Positives = 531/720 (73%)
Query: 36 FSPTRYFVEQVITGFDETDLHRSWIRAAATRSPQERNTRLENMCWRIWNLARKKKQIEGX 95
FSP +YFVE+V+ FDE+DL+++WI+ ATR+ +ER+ RLEN+CWRIW+LARKKKQI
Sbjct: 61 FSPIKYFVEEVVNSFDESDLYKTWIKVIATRNTRERSNRLENICWRIWHLARKKKQIVWD 120
Query: 96 XXXXXXXXXXXXXXXXXXXSADMSEDLSEGDKGDVSGELSAHGGST-----RGRMPRISS 150
D+ +LSEG+K GE T R MPRI S
Sbjct: 121 DGVRLSKRRIEREQGRNDAEEDLLSELSEGEKDKNDGEKEKSEVVTTLEPPRDHMPRIRS 180
Query: 151 VDTMENWAIQYKEKK-LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPG 209
M+ W+ K + LYIVLIS+HGL+RGENMELGRDSDTGGQVKYVVELARAL + G
Sbjct: 181 --EMQIWSEDDKSSRNLYIVLISMHGLVRGENMELGRDSDTGGQVKYVVELARALANTEG 238
Query: 210 VYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 269
V+RVDLLTRQ+S+P+VD++Y EP EML+ +G +S G+YIIRIP G +DKY+
Sbjct: 239 VHRVDLLTRQISSPEVDYSYGEPVEMLSCPP-----EG-SDSCGSYIIRIPCGSRDKYIP 292
Query: 270 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYXXXXXXXXXXXXXXN 329
KE LWPHIPEFVD AL HI+ I++ LGEQV G+PIWP IHGHY N
Sbjct: 293 KESLWPHIPEFVDGALNHIVSIARSLGEQVNGGKPIWPYVIHGHYADAGEVAAHLAGALN 352
Query: 330 VPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEI 389
VPMV TGHSLGR+K EQLL+QGR++R++I+ TYKIMRRIEAEE SLDA+E+V+TSTRQEI
Sbjct: 353 VPMVLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEI 412
Query: 390 EEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNG-DVDGEV 448
+ QW LYDGFD LERKLR R +RGVSC GR+MPRMVVIPPG++F +++ + + DG++
Sbjct: 413 DAQWGLYDGFDIKLERKLRVRRRRGVSCLGRYMPRMVVIPPGMDFSYVLTQDSQEPDGDL 472
Query: 449 ER----DEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLR 504
+ D P PPIWSEIM FFSNP KP ILAL+RPD KKN+TTLVKAFGEC+PLR
Sbjct: 473 KSLIGPDRNQIKKPVPPIWSEIMRFFSNPHKPTILALSRPDHKKNVTTLVKAFGECQPLR 532
Query: 505 ELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 564
ELANL LI+GNRDDI+EM +++ +L+++LKLID+YDLYGQVAYPKHHKQS+VPDIYRLA
Sbjct: 533 ELANLVLILGNRDDIEEMPNSSSVVLMNVLKLIDQYDLYGQVAYPKHHKQSEVPDIYRLA 592
Query: 565 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIA 624
AKTKGVFINPA +EPFGLTLIEAAAYGLPIVAT+NGGPVDI + L+NGLLVDPHDQQ+I+
Sbjct: 593 AKTKGVFINPALVEPFGLTLIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPHDQQAIS 652
Query: 625 DALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQPRWQRSDDGLDNS 684
DALLKLV++K LW CR+NGLKNIH+FSWPEHC++YLS + C+ R P S D +
Sbjct: 653 DALLKLVANKHLWAECRKNGLKNIHRFSWPEHCRNYLSHVEHCRNRHPT--SSLDIMKVP 710
Query: 685 ESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDNSLDTEENAVTGKNKLENAVLALSN 744
E + DS RD+ D+SL + S EGD TL+ LD A T + KL +A+ +++
Sbjct: 711 E-ELTSDSLRDVDDISL--RFSTEGD-----FTLNGELD----AGTRQKKLVDAISQMNS 758
|
|
| TAIR|locus:2155894 SUS2 "sucrose synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 371 (135.7 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 136/513 (26%), Positives = 236/513 (46%)
Query: 168 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 227
+V++S HG N+ LG DTGGQV Y+++ RAL + + R+ +V +
Sbjct: 278 VVILSPHGYFGQANV-LGLP-DTGGQVVYILDQVRALENEM-LLRIQKQGLEVIPKILIV 334
Query: 228 TYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPF----GPKDKYVQKELLWPHIPEFVDA 283
T P N ++ + + A+I+RIPF G K++ + +WP++ F +
Sbjct: 335 TRLLPEAKGTTCNQR--LERVSGTEHAHILRIPFRTEKGILRKWISRFDVWPYLETFAED 392
Query: 284 ALTHIIQISKVLGEQVGSGQPIWPVAIHGHYXXXXXXXXXXXXXXNVPMVFTGHSLGRDK 343
A +IS L Q + P I G+Y V H+L + K
Sbjct: 393 ASN---EISAEL-------QGV-PNLIIGNYSDGNLVASLLASKLGVIQCNIAHALEKTK 441
Query: 344 LEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEI---EEQWRLYDGFD 400
+ R D+ Y + A+ ++++ ++ +ITST QEI + Y+
Sbjct: 442 YPESDIYWRNHEDK----YHFSSQFTADLIAMNNADFIITSTYQEIAGSKNNVGQYESHT 497
Query: 401 PVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDP 460
L R+ G+ F P+ ++ PG + ++ D E R S +
Sbjct: 498 AFTMPGLY-RVVHGIDV---FDPKFNIVSPGADMTIYFPYS---DKE-RRLTALHESIEE 549
Query: 461 PIWS-----EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGN 515
++S E + S+ KP+I ++AR D KN+T LV+ + + LRELANL ++ G
Sbjct: 550 LLFSAEQNDEHVGLLSDQSKPIIFSMARLDRVKNLTGLVECYAKNSKLRELANLVIVGGY 609
Query: 516 RDDIDEMSGTNAALLLSILKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINP 574
D+ A + + LI++YDL+G+ + ++ ++YR A TKGVF+ P
Sbjct: 610 IDENQSRDREEMAEIQKMHSLIEQYDLHGEFRWIAAQMNRARNGELYRYIADTKGVFVQP 669
Query: 575 AFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLV--- 631
AF E FGLT++E+ LP AT +GGP +I +G +DP+ +A L+
Sbjct: 670 AFYEAFGLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAATLVSFFETC 729
Query: 632 -SDKQLWERCRQNGLKNIHQ-FSWPEHCKSYLS 662
++ W + + GLK I++ ++W ++ + L+
Sbjct: 730 NTNPNHWVKISEGGLKRIYERYTWKKYSERLLT 762
|
|
| TAIR|locus:2206865 SUS6 "sucrose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 364 (133.2 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 139/514 (27%), Positives = 235/514 (45%)
Query: 168 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 227
+V+ S+HG G+ LG DTGGQV Y+++ RAL + R++ +
Sbjct: 285 VVIFSVHGYF-GQQDVLGLP-DTGGQVVYILDQVRALEEEL-LIRINQQGLGFKPQILVV 341
Query: 228 TYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPF----GPKDKYVQKELLWPHIPEFVDA 283
T P E K + L + + + ++I+R+PF G ++V + ++P++ F
Sbjct: 342 TRLIP-EARGTKCDQEL-EAIEGTKHSHILRVPFVTNKGVLRQWVSRFDIYPYLERFTQD 399
Query: 284 ALTHIIQISKVLGEQVGSGQPIWPVAIHGHYXXXXXXXXXXXXXXNVPMVFTGHSLGRDK 343
A + I+Q P I G+Y V H+L + K
Sbjct: 400 ATSKILQRLDCK-----------PDLIIGNYTDGNLVASLMATKLGVTQGTIAHALEKTK 448
Query: 344 LEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEI---EEQWRLYDGFD 400
E + + E++ Y + A+ ++++ ++ +ITST QEI +++ Y+
Sbjct: 449 YEDSDAKWK----ELDPKYHFSCQFTADLIAMNVTDFIITSTYQEIAGSKDRPGQYESHT 504
Query: 401 PVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASP-- 458
L R+ G+ F P+ + PG + + + D + S
Sbjct: 505 AFTMPGL-CRVVSGIDV---FDPKFNIAAPGAD-QSVYFPYTEKDKRFTKFHPSIQELLY 559
Query: 459 DPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDD 518
+ +E M + ++ KP+I ++AR D KNIT LV+ +G+ + LRE+ANL ++ G D
Sbjct: 560 NEKDNAEHMGYLADREKPIIFSMARLDTVKNITGLVEWYGKDKRLREMANLVVVAGFFDM 619
Query: 519 IDEMSGTNAALLLSILKLIDKYDLYGQ----VAYPKHHKQSDVPDIYRLAAKTKGVFINP 574
A + + LI+KY L G+ A ++ S+ +YR A TKGVF+ P
Sbjct: 620 SKSNDREEKAEIKKMHDLIEKYKLKGKFRWIAAQTDRYRNSE---LYRCIADTKGVFVQP 676
Query: 575 AFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLD--NGLLVDPH--DQQ--SIADALL 628
A E FGLT+IEA GLP AT GGP +I ++D +G +DP+ D+ I D
Sbjct: 677 ALYEAFGLTVIEAMNCGLPTFATNQGGPAEI--IVDGVSGFHIDPNNGDESVTKIGDFFS 734
Query: 629 KLVSDKQLWERCRQNGLKNIHQ-FSWPEHCKSYL 661
K SD W+ + GLK I++ ++W + + L
Sbjct: 735 KCRSDGLYWDNISKGGLKRIYECYTWKIYAEKLL 768
|
|
| TAIR|locus:2137829 SUS3 "AT4G02280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 355 (130.0 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 131/505 (25%), Positives = 224/505 (44%)
Query: 168 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 227
+V++S HG N+ LG DTGGQV Y+++ RAL + + R+ +S +
Sbjct: 281 VVILSPHGYFGQANV-LGLP-DTGGQVVYILDQVRALETEM-LLRIKRQGLDISPSILIV 337
Query: 228 TYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPF----GPKDKYVQKELLWPHIPEFV-D 282
T P N ++ + + +I+R+PF G K++ + +WP++ + D
Sbjct: 338 TRLIPDAKGTTCNQR--LERVSGTEHTHILRVPFRSEKGILRKWISRFDVWPYLENYAQD 395
Query: 283 AALTHIIQISKVLGEQVGSGQPIWPVAIHGHYXXXXXXXXXXXXXXNVPMVFTGHSLGRD 342
AA S+++GE G P I G+Y V H+L +
Sbjct: 396 AA-------SEIVGELQGV-----PDFIIGNYSDGNLVASLMAHRMGVTQCTIAHALEKT 443
Query: 343 KLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 402
K + + + Y + A+ ++++ ++ +ITST QEI ++
Sbjct: 444 KYPD----SDIYWKDFDNKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESH 499
Query: 403 LERKLRA--RIKRGVSCHGRFMPRMVVIPPGIE------FHHIVRHNGDVDGEVERDEGS 454
L R+ G+ F P+ ++ PG + + R + G +E S
Sbjct: 500 GAFTLPGLYRVVHGIDV---FDPKFNIVSPGADMTIYFPYSEETRRLTALHGSIEEMLYS 556
Query: 455 PASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMG 514
P D + + S+ KP++ ++AR D KNI+ LV+ + + LREL NL +I G
Sbjct: 557 PDQTDEHVGT-----LSDRSKPILFSMARLDKVKNISGLVEMYSKNTKLRELVNLVVIAG 611
Query: 515 NRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFIN 573
N D + + L+ Y L GQ + ++ ++YR A T+G F
Sbjct: 612 NIDVNKSKDREEIVEIEKMHNLMKNYKLDGQFRWITAQTNRARNGELYRYIADTRGAFAQ 671
Query: 574 PAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDP-HDQQS---IADALLK 629
PAF E FGLT++EA GLP AT +GGP +I +G +DP H +Q+ +AD +
Sbjct: 672 PAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGLSGFHIDPYHPEQAGNIMADFFER 731
Query: 630 LVSDKQLWERCRQNGLKNIHQ-FSW 653
D W++ GL+ I++ ++W
Sbjct: 732 CKEDPNHWKKVSDAGLQRIYERYTW 756
|
|
| TAIR|locus:2084756 SUS4 "AT3G43190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 349 (127.9 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 131/512 (25%), Positives = 230/512 (44%)
Query: 168 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 227
+V++S HG +N+ LG DTGGQV Y+++ RAL + + R+ ++ +
Sbjct: 281 VVILSPHGYFAQDNV-LGYP-DTGGQVVYILDQVRALETEM-LQRIKQQGLNITPRILII 337
Query: 228 TYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPF----GPKDKYVQKELLWPHIPEFVDA 283
T P + + L + G S I+R+PF G K++ + +WP++ F +
Sbjct: 338 TRLLP-DAAGTTCGQRLEKVYG-SQYCDILRVPFRTEKGIVRKWISRFEVWPYLETFTED 395
Query: 284 ALTHIIQISKVLGEQVGSGQPIWPVAIHGHYXXXXXXXXXXXXXXNVPMVFTGHSLGRDK 343
+ISK L G+P I G+Y V H+L + K
Sbjct: 396 VAA---EISKEL-----QGKPD---LIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTK 444
Query: 344 LEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403
+ +++ Y + A+ ++++ ++ +ITST QEI ++
Sbjct: 445 YPD----SDIYWKKLDEKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHR 500
Query: 404 ERKLRA--RIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPP 461
L R+ G+ F P+ ++ PG + + E R +
Sbjct: 501 SFTLPGLYRVVHGIDV---FDPKFNIVSPGADMSIYFAYTE----EKRRLTAFHLEIEEL 553
Query: 462 IWSEIM---HF--FSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNR 516
++S++ H + +KP+I +AR D KN++ LV+ +G+ LREL NL ++ G+R
Sbjct: 554 LYSDVENEEHLCVLKDKKKPIIFTMARLDRVKNLSGLVEWYGKNTRLRELVNLVVVGGDR 613
Query: 517 DDIDEMSGTNAALLLSILKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPA 575
+ A + + +LI++Y L GQ + + ++YR TKG F+ PA
Sbjct: 614 RK-ESQDNEEKAEMKKMYELIEEYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA 672
Query: 576 FIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPH--DQ--QSIADALLKLV 631
E FGLT++EA GLP AT NGGP +I +G +DP+ D+ +S+AD K
Sbjct: 673 LYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDKAAESLADFFTKCK 732
Query: 632 SDKQLWERCRQNGLKNIHQ-FSWPEHCKSYLS 662
D W++ GL+ I + ++W + + L+
Sbjct: 733 HDPSHWDQISLGGLERIQEKYTWQIYSQRLLT 764
|
|
| TAIR|locus:2180489 SUS1 "AT5G20830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 351 (128.6 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
Identities = 129/512 (25%), Positives = 232/512 (45%)
Query: 168 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 227
+V++S HG +N+ LG DTGGQV Y+++ RAL + + R+ + +
Sbjct: 281 VVILSPHGYFAQDNV-LGYP-DTGGQVVYILDQVRAL-EIEMLQRIKQQGLNIKPRILIL 337
Query: 228 TYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPF----GPKDKYVQKELLWPHIPEFVDA 283
T P + + E L + + +S I+R+PF G K++ + +WP++ + +
Sbjct: 338 TRLLP-DAVGTTCGERL-ERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTED 395
Query: 284 ALTHIIQISKVLGEQVGSGQPIWPVAIHGHYXXXXXXXXXXXXXXNVPMVFTGHSLGRDK 343
A +++SK L +G+P I G+Y V H+L + K
Sbjct: 396 AA---VELSKEL-----NGKPD---LIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTK 444
Query: 344 LEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403
+ +++ Y + A+ +++ ++ +ITST QEI ++
Sbjct: 445 YPD----SDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHT 500
Query: 404 ERKLRA--RIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPP 461
L R+ G+ F P+ ++ PG + + E R + +
Sbjct: 501 AFTLPGLYRVVHGIDV---FDPKFNIVSPGADMSIYFPYTE----EKRRLTKFHSEIEEL 553
Query: 462 IWSEIM---HF--FSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNR 516
++S++ H + +KP++ +AR D KN++ LV+ +G+ LRELANL ++ G+R
Sbjct: 554 LYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDR 613
Query: 517 DDIDEMSGTNAALLLSILKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPA 575
+ A + + LI++Y L GQ + + ++YR TKG F+ PA
Sbjct: 614 RK-ESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPA 672
Query: 576 FIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPH--DQ--QSIADALLKLV 631
E FGLT++EA GLP AT GGP +I +G +DP+ DQ ++AD K
Sbjct: 673 LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCK 732
Query: 632 SDKQLWERCRQNGLKNIHQ-FSWPEHCKSYLS 662
D W+ + GL+ I + ++W + + L+
Sbjct: 733 EDPSHWDEISKGGLQRIEEKYTWQIYSQRLLT 764
|
|
| TAIR|locus:2166203 SUS5 "sucrose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 337 (123.7 bits), Expect = 9.2e-27, P = 9.2e-27
Identities = 132/524 (25%), Positives = 231/524 (44%)
Query: 168 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 227
+V+ S+HG G+ LG DTGGQV Y+++ +AL + R++ +
Sbjct: 274 VVIFSVHGYF-GQTDVLGLP-DTGGQVVYILDQVKALEDEL-LQRINSQGLNFKPQILVV 330
Query: 228 TYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPF----GPKDKYVQKELLWPHIPEFVDA 283
T P + N E ++ + + + I+RIPF G ++V + ++P++ F
Sbjct: 331 TRLIPDAKKTKCNQE--LEPIFGTKYSNILRIPFVTENGILRRWVSRFDIYPYLERFTKD 388
Query: 284 ALTHIIQISKVLGEQVGSGQPIWPVAIHGHYXXXXXXXXXXXXXXNVPMVFTGHSLGRDK 343
A T I+ I + G+P I G+Y + H+L + K
Sbjct: 389 ATTKILDILE--------GKPD---LIIGNYTDGNLVASLMANKLGITQATIAHALEKTK 437
Query: 344 LEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403
E + E + Y + A+ +S+++++ +I ST QEI ++ +
Sbjct: 438 YED----SDIKWKEFDPKYHFSSQFTADLISMNSADFIIASTYQEIAGSKERAGQYESHM 493
Query: 404 ERKLRARIKRGVSCHGRFMPRMVVIPPG----IEFHHIVRHNGDVDGEVERDEGSPASPD 459
+ + R VS F PR + PG I F + DE + +
Sbjct: 494 SFTVPG-LYRVVSGINVFDPRFNIAAPGADDSIYFPFTAQDRRFTKFYTSIDELLYSQSE 552
Query: 460 PPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDI 519
E + + + +KP+I ++AR D KN+T L + + + + LR+L NL ++ G D
Sbjct: 553 N---DEHIGYLVDKKKPIIFSMARLDVVKNLTGLTEWYAKNKRLRDLVNLVIVGGFFDAS 609
Query: 520 DEMSGTNAALLLSILKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIE 578
+ + + LI+KY L GQ + ++ ++YR A T+G F+ PA E
Sbjct: 610 KSKDREEISEIKKMHSLIEKYQLKGQFRWITAQTDRTRNGELYRSIADTRGAFVQPAHYE 669
Query: 579 PFGLTLIEAAAYGLPIVATKNGGPVDIHRVLD--NGLLVDPHD-QQS---IADALLKLVS 632
FGLT+IEA + GL AT GGP +I ++D +G +DP + ++S IAD K
Sbjct: 670 AFGLTVIEAMSCGLVTFATNQGGPAEI--IVDGVSGFHIDPSNGEESSDKIADFFEKSGM 727
Query: 633 DKQLWERCRQNGLKNIHQ-FSWPEHCKSYLSRISSCKQRQPRWQ 675
D W GL+ I++ ++W K Y +++ + W+
Sbjct: 728 DPDYWNMFSNEGLQRINECYTW----KIYANKVINMGSTYSYWR 767
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q43876 | SPSA_VICFA | 2, ., 4, ., 1, ., 1, 4 | 0.7377 | 0.9943 | 0.9896 | N/A | no |
| Q94BT0 | SPSA1_ARATH | 2, ., 4, ., 1, ., 1, 4 | 0.7204 | 0.9819 | 0.9923 | yes | no |
| Q9FY54 | SPSA2_ARATH | 2, ., 4, ., 1, ., 1, 4 | 0.7179 | 0.9791 | 0.9856 | no | no |
| P31927 | SPSA_MAIZE | 2, ., 4, ., 1, ., 1, 4 | 0.5684 | 0.9468 | 0.9344 | N/A | no |
| Q6ZHZ1 | SPSA4_ORYSJ | 2, ., 4, ., 1, ., 1, 4 | 0.6848 | 0.9800 | 0.9690 | yes | no |
| Q43845 | SPSA_SOLTU | 2, ., 4, ., 1, ., 1, 4 | 0.7551 | 0.9905 | 0.9914 | N/A | no |
| P49031 | SPSA_BETVU | 2, ., 4, ., 1, ., 1, 4 | 0.7220 | 0.9829 | 0.9913 | N/A | no |
| A2WYE9 | SPSA1_ORYSI | 2, ., 4, ., 1, ., 1, 4 | 0.5570 | 0.9592 | 0.9326 | N/A | no |
| P31928 | SPSA_SPIOL | 2, ., 4, ., 1, ., 1, 4 | 0.7365 | 0.9905 | 0.9886 | N/A | no |
| O22060 | SPSA1_CITUN | 2, ., 4, ., 1, ., 1, 4 | 0.7735 | 0.9943 | 0.9914 | N/A | no |
| O04933 | SPSA2_CRAPL | 2, ., 4, ., 1, ., 1, 4 | 0.5734 | 0.9876 | 0.9629 | N/A | no |
| O04932 | SPSA1_CRAPL | 2, ., 4, ., 1, ., 1, 4 | 0.7425 | 0.9857 | 0.9857 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1054 | |||
| TIGR02468 | 1050 | TIGR02468, sucrsPsyn_pln, sucrose phosphate syntha | 0.0 | |
| TIGR02472 | 439 | TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas | 1e-179 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 1e-152 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 2e-49 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 2e-35 | |
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 3e-34 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 2e-26 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 1e-25 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 1e-24 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 5e-24 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 2e-20 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 7e-19 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 1e-18 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 2e-16 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 3e-16 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 6e-16 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 6e-16 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 1e-15 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 1e-15 | |
| TIGR02471 | 236 | TIGR02471, sucr_syn_bact_C, sucrose phosphate synt | 1e-14 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 4e-14 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 1e-12 | |
| cd03813 | 475 | cd03813, GT1_like_3, This family is most closely r | 2e-12 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 4e-12 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 7e-12 | |
| pfam05116 | 247 | pfam05116, S6PP, Sucrose-6F-phosphate phosphohydro | 8e-12 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 1e-10 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 2e-10 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 3e-10 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 1e-09 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 2e-09 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 5e-09 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 7e-09 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 1e-08 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 1e-08 | |
| TIGR04047 | 373 | TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M | 3e-08 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 2e-07 | |
| cd03796 | 398 | cd03796, GT1_PIG-A_like, This family is most close | 4e-07 | |
| TIGR02095 | 473 | TIGR02095, glgA, glycogen/starch synthase, ADP-glu | 6e-07 | |
| pfam00862 | 550 | pfam00862, Sucrose_synth, Sucrose synthase | 2e-06 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 2e-06 | |
| cd03791 | 476 | cd03791, GT1_Glycogen_synthase_DULL1_like, This fa | 3e-06 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 3e-06 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 3e-06 | |
| COG0297 | 487 | COG0297, GlgA, Glycogen synthase [Carbohydrate tra | 5e-06 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 5e-06 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 3e-05 | |
| pfam13579 | 158 | pfam13579, Glyco_trans_4_4, Glycosyl transferase 4 | 9e-05 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 3e-04 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 8e-04 | |
| TIGR04063 | 397 | TIGR04063, stp3, PEP-CTERM/exosortase A-associated | 0.002 | |
| cd03812 | 358 | cd03812, GT1_CapH_like, This family is most closel | 0.003 | |
| cd04946 | 407 | cd04946, GT1_AmsK_like, This family is most closel | 0.003 | |
| PRK00654 | 466 | PRK00654, glgA, glycogen synthase; Provisional | 0.004 |
| >gnl|CDD|233879 TIGR02468, sucrsPsyn_pln, sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Score = 1964 bits (5089), Expect = 0.0
Identities = 785/1056 (74%), Positives = 894/1056 (84%), Gaps = 13/1056 (1%)
Query: 1 MAGNDWVNSYLEAILDVGPGIDDAKSS--LLLRERGRFSPTRYFVEQVITGFDETDLHRS 58
MAGNDW+NSYLEAILDVGPG+DDAKSS LLLRERGRFSPTRYFVE+VITGFDETDLHR+
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKSSALLLLRERGRFSPTRYFVEEVITGFDETDLHRT 60
Query: 59 WIRAAATRSPQERNTRLENMCWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADM 118
W++A ATRSPQERNTRLENMCWRIWNLARKKKQ+E EEAQR AKRRLERERGR+EA+ADM
Sbjct: 61 WVKAVATRSPQERNTRLENMCWRIWNLARKKKQLEWEEAQRLAKRRLERERGRREATADM 120
Query: 119 SEDLSEGDKGDVSGELSAHGG--STRGRMPRISSVDTMENWAIQYKEKKLYIVLISLHGL 176
SEDLSEG+KGDV+G++S GG ST+GR+PRISS ME W+ Q KEKKLYIVLISLHGL
Sbjct: 121 SEDLSEGEKGDVAGDISVAGGEPSTKGRLPRISSNLEMETWSDQQKEKKLYIVLISLHGL 180
Query: 177 IRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEML 236
+RGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVDW+Y EP+EML
Sbjct: 181 VRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEML 240
Query: 237 NRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLG 296
+++EN +GESSGAYIIRIPFGP+DKY+ KE LWP+IPEFVD AL+HI+ +SKVLG
Sbjct: 241 TPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLG 300
Query: 297 EQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRD 356
EQ+GSG P+WP IHGHYADAGD+AALLSGALNVPMV TGHSLGRDKLEQLLKQGR+S++
Sbjct: 301 EQIGSGHPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKE 360
Query: 357 EINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVS 416
EIN+TYKIMRRIEAEELSLDASEIVITSTRQEIEEQW LYDGFD +LERKLRAR +RGVS
Sbjct: 361 EINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVS 420
Query: 417 CHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKP 476
C+GRFMPRM VIPPG+EF HIV H+GD+DGE E +E PA PDPPIWSEIM FF+NPRKP
Sbjct: 421 CYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKP 480
Query: 477 MILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKL 536
MILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMS ++++L S+LKL
Sbjct: 481 MILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKL 540
Query: 537 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVA 596
IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAA+GLP+VA
Sbjct: 541 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVA 600
Query: 597 TKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEH 656
TKNGGPVDIHRVLDNGLLVDPHDQQ+IADALLKLV+DKQLW CRQNGLKNIH FSWPEH
Sbjct: 601 TKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAECRQNGLKNIHLFSWPEH 660
Query: 657 CKSYLSRISSCKQRQPRWQRS-DDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGG 715
CK+YLSRI+SC+ R P+WQR DDG + SE +SPGDS RDI D+SLNL + + + N G
Sbjct: 661 CKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGS 720
Query: 716 STLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYVFVIA 775
S ++ S + K+ENAV + S G + KA +GK+PALRRRK +FVIA
Sbjct: 721 SNVEGSGPPADR----VAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRRKRLFVIA 776
Query: 776 ADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFI 835
DC D L+IIK + EA K+ G GF+LST++TI E+ S L SGGL+P FDA I
Sbjct: 777 VDCYDDKDLLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALI 836
Query: 836 CNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGE-E 894
CNSGSELYYPS + + + D DY H EYRWGGEGLRKTLV+WAAS+N+KKGE E
Sbjct: 837 CNSGSELYYPSLNGSEEG--KLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENE 894
Query: 895 GKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVL 954
+IVEEDE ST HCYAF+V +P +PPVKELRKL+RIQ LRCH +YC+NGT+L+VIP+L
Sbjct: 895 EQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPLL 954
Query: 955 ASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESA-RKLHAN 1013
ASRSQALRYL VRWGI+L+N+ V GE GDTDYEGLLGG+HKTVILKGV +LHAN
Sbjct: 955 ASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKGVVSRGSEQLHAN 1014
Query: 1014 RNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 1049
R+Y L+DV+ DS N++Q S DI +L+KL
Sbjct: 1015 RSYPLDDVVPLDSPNIVQATGGSSSDDISDALKKLS 1050
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. Length = 1050 |
| >gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Score = 530 bits (1366), Expect = e-179
Identities = 228/503 (45%), Positives = 302/503 (60%), Gaps = 69/503 (13%)
Query: 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDV 225
LY++L+SLHGLIRG ++ELGRD+DTGGQ KYV+ELARAL V +VDL+TR + V
Sbjct: 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKV 60
Query: 226 DWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAAL 285
YA+P E + GA I+R+PFGP+ +Y++KELLWP++ E D L
Sbjct: 61 SPDYAQPIERIA--------------PGARIVRLPFGPR-RYLRKELLWPYLDELADNLL 105
Query: 286 THIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLE 345
H+ Q Q P IH HYADAG A LS L VP++FTGHSLGR+K
Sbjct: 106 QHLRQ------------QGHLPDLIHAHYADAGYVGARLSRLLGVPLIFTGHSLGREKRR 153
Query: 346 QLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405
+LL G L +I Y I RRIEAEE +L + +VITST QEIEEQ+ LYD + P
Sbjct: 154 RLLAAG-LKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQP---- 208
Query: 406 KLRARIKRGVSCHGRFMPRMVVIPPGIE---FHHIVRHNGDVDGEVERDEGSPASPDPPI 462
RM VIPPG++ F+ + I
Sbjct: 209 -----------------ERMQVIPPGVDLSRFYPP----------------QSSEETSEI 235
Query: 463 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEM 522
+ + F +P KP ILA++RPD +KNI +LV+A+G L+E+ANL L++G RDDI +M
Sbjct: 236 DNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKM 295
Query: 523 SGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGL 582
+L +L LID+YDLYG+VAYPKHH+ DVP++YRLAA+++G+F+NPA EPFGL
Sbjct: 296 ESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGL 355
Query: 583 TLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQ 642
TL+EAAA GLPIVAT +GGP DI NGLLVD D ++IA AL +SD W+ +
Sbjct: 356 TLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSR 415
Query: 643 NGLKNIH-QFSWPEHCKSYLSRI 664
NG++ + +SW H + YL +
Sbjct: 416 NGIEGVRRHYSWDAHVEKYLRIL 438
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 457 bits (1177), Expect = e-152
Identities = 168/497 (33%), Positives = 227/497 (45%), Gaps = 100/497 (20%)
Query: 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD 226
I LISLHG + +DTGGQ YV+ELARAL + + VD+ TR++
Sbjct: 1 RIALISLHGSPLAQPGG----ADTGGQNVYVLELARALARL--GHEVDIFTRRIDDALPP 54
Query: 227 WTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALT 286
P G ++R+P GP +Y+ KE LWP++ EF D L
Sbjct: 55 IVELAP--------------------GVRVVRVPAGPA-EYLPKEELWPYLDEFADDLLR 93
Query: 287 HIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQ 346
+ + P IH HY D+G A LL+ L +P+V T HSLG K
Sbjct: 94 FL------------RREGGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAVKRRH 141
Query: 347 LLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406
L TY+ RRIEAEE L A++ VI ST QE EE + LY +
Sbjct: 142 LGAAD---------TYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAYPR----- 187
Query: 407 LRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEI 466
R+ V+PPG++ +P +
Sbjct: 188 -----------------RIRVVPPGVDLERF-------------------TPYGRAEARR 211
Query: 467 MHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTN 526
+P KP ILA+ R DP+K I TL++A+ E LRE ANL ++ G RDDI M
Sbjct: 212 ARLLRDPDKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEE 271
Query: 527 AALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIE 586
L L +ID+ D +P + D+P +YR A VF+NPA EPFGLT +E
Sbjct: 272 LRELARELGVIDRVD------FPGRVSREDLPALYRAA----DVFVNPALYEPFGLTALE 321
Query: 587 AAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLK 646
A A GLP+VAT GGP DI GLLVDP D +++A AL +L++D L R + GL+
Sbjct: 322 AMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLR 381
Query: 647 NIHQ-FSWPEHCKSYLS 662
++W L
Sbjct: 382 RARARYTWERVAARLLE 398
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 2e-49
Identities = 146/536 (27%), Positives = 249/536 (46%), Gaps = 91/536 (16%)
Query: 168 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARA-------------LGSMPGVYRVD 214
+V++S HG EN+ LG DTGGQV Y+++ RA L P ++
Sbjct: 258 VVILSPHGYFGQENV-LGLP-DTGGQVVYILDQVRALENEMLQRIKLQGLEITP---KIL 312
Query: 215 LLTRQVSAPDVDWTYAEPSEMLNR-KNTENLMQGLGESSGAYIIRIPFGPKD-----KYV 268
++TR + PD + T ++ L + TE+ A+I+R+PF ++ ++
Sbjct: 313 IVTRLI--PDAEGTTC--NQRLEKVYGTEH----------AWILRVPFRTENGIILRNWI 358
Query: 269 QKELLWPHIPEF-VDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA 327
+ +WP++ F DA ++L E G P I G+Y+D A+LL+
Sbjct: 359 SRFEIWPYLETFAEDAE-------KEILAELQGK-----PDLIIGNYSDGNLVASLLARK 406
Query: 328 LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQ 387
L V H+L + K + E Y + A+ ++++A++ +ITST Q
Sbjct: 407 LGVTQCTIAHALEKTKYPD----SDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQ 462
Query: 388 EI------EEQWRLYDGFD-PVLERKLRARIKRGVSCHG--RFMPRMVVIPPGIE----- 433
EI Q+ + F P L R + HG F P+ ++ PG +
Sbjct: 463 EIAGTKDSVGQYESHQAFTMPGLYRVV----------HGIDVFDPKFNIVSPGADESIYF 512
Query: 434 -FHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITT 492
+ + ++ E+E S D E + +P KP+I ++AR D KN+T
Sbjct: 513 PYSDKEKRLTNLHPEIEELLFSLEDND-----EHYGYLKDPNKPIIFSMARLDRVKNLTG 567
Query: 493 LVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH 552
LV+ +G LREL NL ++ G D + A + + LID+Y L+GQ+ +
Sbjct: 568 LVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQ 627
Query: 553 -KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDN 611
+ ++YR A TKG+F+ PA E FGLT++EA GLP AT+ GGP++I + +
Sbjct: 628 LNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVS 687
Query: 612 GLLVDPHDQQSIADALLKLVS----DKQLWERCRQNGLKNIHQ-FSWPEHCKSYLS 662
G +DP+ + A+ ++ D W++ Q GL+ I++ ++W + + L+
Sbjct: 688 GFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLT 743
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 139 bits (351), Expect = 2e-35
Identities = 99/477 (20%), Positives = 169/477 (35%), Gaps = 126/477 (26%)
Query: 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGE 250
GG ++V+ELARAL + + V +LT +
Sbjct: 14 GGAERHVLELARALAARG--HEVTVLTPGDGGLPDEEEVG-------------------- 51
Query: 251 SSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAI 310
I+ + P + + LL + +
Sbjct: 52 ----GIVVVRPPPLLRVRRLLLLLLLALRLRRLLRRERFDV------------------V 89
Query: 311 HGHYADAGDAAALLSGALNVPMVFTGHSL-GRDKLEQLLKQGRLSRDEINTTYKIMRRIE 369
H H A AAAL + L +P+V T H L +L +L+R + RI
Sbjct: 90 HAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRI- 148
Query: 370 AEELSLDASEIVIT-STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVI 428
I ++ +TR+E+ E G ++ VI
Sbjct: 149 ----------IAVSEATREELRE-------------------------LGGVPPEKITVI 173
Query: 429 PPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKK 488
P G++ P + +P+IL + R P+K
Sbjct: 174 PNGVD---------------------TERFRPAPRAARRRLGIPEDEPVILFVGRLVPRK 212
Query: 489 NITTLVKAFGECRPLRELANLTLIM-GNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVA 547
+ L++A + R +E ++ L++ G+ +E+ L + L +V
Sbjct: 213 GVDLLLEALAKLR--KEYPDVRLVIVGDGPLREEL-----------EALAAELGLGDRVT 259
Query: 548 YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDI-- 605
+ D+P +Y A VF+ P+ E FGL L+EA A GLP+VA+ GG ++
Sbjct: 260 FLGFVPDEDLPALYAAAD----VFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVE 315
Query: 606 HRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYL 661
GLLV P D +++A+A+L+L+ D +L R + + + +FSW
Sbjct: 316 DGE--TGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTE 370
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 3e-34
Identities = 154/535 (28%), Positives = 249/535 (46%), Gaps = 108/535 (20%)
Query: 168 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGS----------MPGVYRVDLLT 217
+V+ S HG N+ LG DTGGQV Y+++ RAL + + ++ ++T
Sbjct: 282 VVIFSPHGYFGQANV-LGL-PDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVT 339
Query: 218 RQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSG---AYIIRIPF----GPKDKYVQK 270
R + PD + T N Q L + SG ++I+R+PF G K++ +
Sbjct: 340 RLI--PDA------------KGTTCN--QRLEKVSGTEHSHILRVPFRTEKGILRKWISR 383
Query: 271 ELLWPHIPEFV-DAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALN 329
+WP++ F DAA S++L E G P I G+Y+D A+LL+ L
Sbjct: 384 FDVWPYLETFAEDAA-------SEILAELQGK-----PDLIIGNYSDGNLVASLLAHKLG 431
Query: 330 VPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEI 389
V H+L + K + + + Y + A+ ++++ ++ +ITST QEI
Sbjct: 432 VTQCTIAHALEKTKYPD----SDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEI 487
Query: 390 EE------QWRLYDGFD-PVLERKLRARIKRGVSCHGRFMPRMVVIPPG----IEFHHIV 438
Q+ + F P L R+ G+ F P+ ++ PG I F +
Sbjct: 488 AGSKDTVGQYESHTAFTLPGL-----YRVVHGIDV---FDPKFNIVSPGADMSIYFPYTE 539
Query: 439 RHN--GDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKA 496
+ + +E SP D E + + + +KP+I ++AR D KN+T LV+
Sbjct: 540 KQKRLTSLHPSIEELLYSPEQND-----EHIGYLKDRKKPIIFSMARLDRVKNLTGLVEW 594
Query: 497 FGECRPLRELANLTLIMGNRD-----DIDEMSGTNAALLLSILK---LIDKYDLYGQVAY 548
+G+ + LREL NL ++ G D D +E++ I K LI+KY+L GQ +
Sbjct: 595 YGKNKRLRELVNLVVVGGFIDPSKSKDREEIA--------EIKKMHSLIEKYNLKGQFRW 646
Query: 549 PKHHKQSDVP---DIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDI 605
Q++ ++YR A TKG F+ PA E FGLT++EA GLP AT GGP +I
Sbjct: 647 IA--AQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEI 704
Query: 606 --HRVLDNGLLVDPH--DQQS--IADALLKLVSDKQLWERCRQNGLKNIHQ-FSW 653
V +G +DP+ D+ + IAD K D W + GL+ I++ ++W
Sbjct: 705 IVDGV--SGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTW 757
|
Length = 815 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 112 bits (280), Expect = 2e-26
Identities = 61/299 (20%), Positives = 116/299 (38%), Gaps = 36/299 (12%)
Query: 380 IVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRF------MPRMVVIPPGIE 433
+V+T L R L R+K+ + + ++ G+
Sbjct: 112 LVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKELLEALGVP 171
Query: 434 FHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTL 493
+V NG ++ ++ + K ++L + R DP+K + L
Sbjct: 172 NKIVVIPNG-----IDTEK---------FAPARIGLLPEGGKFVVLYVGRLDPEKGLDLL 217
Query: 494 VKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHK 553
++A + + L ++ + +E+ KL K L V + +
Sbjct: 218 IEAAAKLKKRGPDIKLVIVGDGPERREEL-----------EKLAKKLGLEDNVKFLGYVP 266
Query: 554 QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGL 613
++ ++ A VF+ P+ E FGL L+EA A G P++A+ GG ++ + GL
Sbjct: 267 DEELAELLASAD----VFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGL 322
Query: 614 LVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSCKQRQ 671
LV P D + +ADAL +L+ D +L E + + + +FSW + L +
Sbjct: 323 LVPPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLAEK 381
|
Length = 381 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 1e-25
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 40/240 (16%)
Query: 423 PRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALA 482
++VVIP G++ PP +E++ +P L +
Sbjct: 164 DKIVVIPLGVDPRF---------------------RPPPAEAEVLRALYLLPRPYFLYVG 202
Query: 483 RPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542
+P+KN+ L++AF L +I+G R ++E +L + + L
Sbjct: 203 TIEPRKNLERLLEAFARLPAKGPDPKL-VIVGKRGWLNE----------ELLARLRELGL 251
Query: 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP 602
+V + + ++ +YR A F+ P+ E FGL ++EA A G P++A+
Sbjct: 252 GDRVRFLGYVSDEELAALYRGAR----AFVFPSLYEGFGLPVLEAMACGTPVIASNISS- 306
Query: 603 VDIHRVL-DNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYL 661
+ V D L DP D +++A A+ +L+ D L E R+ GL +FSW + + L
Sbjct: 307 --LPEVAGDAALYFDPLDPEALAAAIERLLEDPALREELRERGLARAKRFSWEKTARRTL 364
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-24
Identities = 58/173 (33%), Positives = 96/173 (55%), Gaps = 18/173 (10%)
Query: 475 KPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIM-GNRDDIDEMSGTNAALLLSI 533
KP+IL + R P+K + L++AF + NL L++ G+ ++ ++
Sbjct: 2 KPIILFVGRLVPEKGLDLLLEAFA--LLKEQHPNLKLVIVGDGEEEKKLK---------- 49
Query: 534 LKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLP 593
KL K L V + D+ ++YR+A +F+ P+ E FGL L+EA A G+P
Sbjct: 50 -KLALKLGLEDNVIFVGFVPDEDLIELYRIA----DLFVLPSRYEGFGLVLLEAMAAGVP 104
Query: 594 IVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLK 646
++AT GGP +I + + GLLVDP D +++A+A+ KL+ D++L ER +N K
Sbjct: 105 VIATDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKLLKDEELRERLGENARK 157
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 5e-24
Identities = 95/359 (26%), Positives = 141/359 (39%), Gaps = 85/359 (23%)
Query: 307 PVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIM 365
P IH H+A G AAALL L +P+V T H + L + L R + +
Sbjct: 94 PDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKRLLRALLR-------RAL 146
Query: 366 RRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRM 425
RR A ++ S L +K G ++
Sbjct: 147 RR---------ADAVIAVS--------------------EALADELKA----LGIDPEKV 173
Query: 426 VVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 485
VIP G+ D + D P K +IL + R
Sbjct: 174 TVIPNGV----------DTERFSPADRAEARKLGLP-----------EDKKVILFVGRLV 212
Query: 486 PKKNITTLVKAFGECRPLRELANLTLIMGN---RDDIDEMSGTNAALLLSILKLIDKYDL 542
P+K I L++A R +L +I+G+ R+ ++ L + L L D+
Sbjct: 213 PRKGIDYLIEALARLLKKRPDVHL-VIVGDGPLREALEA--------LAAELGLEDRVTF 263
Query: 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP 602
G V +VP Y A VF+ P+ E FGL L+EA A GLP+VAT GG
Sbjct: 264 LGAVP------HEEVPAYYAAA----DVFVLPSLREGFGLVLLEAMACGLPVVATDVGGI 313
Query: 603 VDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYL 661
+I +NGLLV P D +++A+A+L+L++D L R + +FSW + L
Sbjct: 314 PEIITDGENGLLVPPGDPEALAEAILRLLADPWLRLG-RAARRRVAERFSWENVAERLL 371
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 93.8 bits (234), Expect = 2e-20
Identities = 51/188 (27%), Positives = 93/188 (49%), Gaps = 25/188 (13%)
Query: 471 SNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAAL 529
S+ + ILA+ R P+K L++A+ + ++ + L I+G D E
Sbjct: 174 SDLKSKRILAVGRLVPQKGFDLLIEAW--AKIAKKHPDWKLRIVG---DGPERE------ 222
Query: 530 LLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAA 589
++ LI + L +V ++ + Y A+ +F+ + E F + L+EA A
Sbjct: 223 --ALEALIKELGLEDRVIL--LGFTKNIEEYYAKAS----IFVLTSRFEGFPMVLLEAMA 274
Query: 590 YGLPIVATK-NGGPVDI--HRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLK 646
+GLP+++ GP +I V NGLLV D +++A+ALL+L+ D++L +R N +
Sbjct: 275 FGLPVISFDCPTGPSEIIEDGV--NGLLVPNGDVEALAEALLRLMEDEELRKRMGANARE 332
Query: 647 NIHQFSWP 654
+ +FS
Sbjct: 333 SAERFSIE 340
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 89.6 bits (223), Expect = 7e-19
Identities = 70/271 (25%), Positives = 108/271 (39%), Gaps = 51/271 (18%)
Query: 381 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSC----------HGRFMPRMVVIPP 430
VI R + + L R L + I V+ G ++VVIP
Sbjct: 107 VIWGIRHSDLDLGKKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAIGYPPKKIVVIPN 166
Query: 431 GIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNI 490
G++ R + D+D E D + I +AR P+K+
Sbjct: 167 GVDT---ERFSPDLDARARLREELGLPEDTFL---------------IGIVARLHPQKDH 208
Query: 491 TTLVKAFGECRPLRELANLTLI--MGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAY 548
TL++A A L L+ +R +++ L L L L DK L G+
Sbjct: 209 ATLLRAAALLLKKFPNARLLLVGDGPDRANLE-------LLALKELGLEDKVILLGE--- 258
Query: 549 PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV 608
+SDVP + VF+ + E F L+EA A GLP+VAT G ++ V
Sbjct: 259 -----RSDVPALLNAL----DVFVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAEL--V 307
Query: 609 LDNGLLVDPHDQQSIADALLKLVSDKQLWER 639
D G LV P D +++A+A+ L++D L +
Sbjct: 308 GDTGFLVPPGDPEALAEAIEALLADPALRQA 338
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 88.8 bits (221), Expect = 1e-18
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 435 HHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLV 494
++ +G V+ D SP+ P P+ L +AR K I L+
Sbjct: 164 TVLIPGSG-----VDLDRFSPSPEPIP-----------EDDPVFLFVARLLKDKGIDELL 207
Query: 495 KAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQ 554
+A + L L+ G+ D+ + + + I+K L G+V + +
Sbjct: 208 EAARILKAKGPNVRLLLV-GDGDEENP----------AAILEIEKLGLEGRVEFLGF--R 254
Query: 555 SDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLD--NG 612
DVP++ A VF+ P++ E L+EA A G P++AT G + V+D NG
Sbjct: 255 DDVPELLAAA----DVFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCREA--VIDGVNG 308
Query: 613 LLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI 648
LV P D +++ADA+ +L+ D +L R Q K
Sbjct: 309 FLVPPGDAEALADAIERLIEDPELRARMGQAARKRA 344
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 2e-16
Identities = 112/466 (24%), Positives = 176/466 (37%), Gaps = 96/466 (20%)
Query: 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGL 248
D GG Y++E A L G+ VD+ TR P
Sbjct: 18 DAGGMNVYILETATELARR-GI-EVDIFTRATRPSQPPVVEVAP---------------- 59
Query: 249 GESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPV 308
G + + GP + +++L P + A T VL + P +
Sbjct: 60 ----GVRVRNVVAGPYEGLDKEDL-----PTQL-CAFTG-----GVLRAEARHE-PGYYD 103
Query: 309 AIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRI 368
IH HY +G LL VP+V T H+L K + + +T RRI
Sbjct: 104 LIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLAAVK--------NAALADGDTPEPEARRI 155
Query: 369 EAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVI 428
++L +D ++ +I +T +E + R YD DP R+ V+
Sbjct: 156 GEQQL-VDNADRLIANTDEEARDLVRHYDA-DP---------------------DRIDVV 192
Query: 429 PPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKK 488
PG + GD E R G P ++ + R P K
Sbjct: 193 APGADLE--RFRPGDRATERAR-LGLP-----------------LDTKVVAFVGRIQPLK 232
Query: 489 NITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAY 548
L++A E NL +I+ + SG+ A ++++L + + +V +
Sbjct: 233 APDVLLRAVAELLDRDPDRNLRVIV-----VGGPSGSGLATPDALIELAAELGIADRVRF 287
Query: 549 PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG-PVDIHR 607
++ +YR A V P++ E FGL +EA A G P+VA + GG PV +
Sbjct: 288 LPPRPPEELVHVYRAAD----VVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAV-A 342
Query: 608 VLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSW 653
+ GLLVD HD ADAL +L+ D + R +++ FSW
Sbjct: 343 DGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVEHAAGFSW 388
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 81.6 bits (202), Expect = 3e-16
Identities = 78/361 (21%), Positives = 123/361 (34%), Gaps = 82/361 (22%)
Query: 308 VAIHGHYADAGDAAALLSGALNVPMVFTGH-SLGRDKLEQLLKQGRLSRDEINTTYKIMR 366
V +HG ++ AAA + +P V + H L L + +
Sbjct: 91 VHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH---------------KALKK 135
Query: 367 RIE---AEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMP 423
R+ E L A+ V ++ QE E RL L+A I
Sbjct: 136 RLAWFLFERRLLQAAAAVHATSEQEAAEIRRLG----------LKAPI------------ 173
Query: 424 RMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALAR 483
VIP G++ G + PI P K +IL L R
Sbjct: 174 --AVIPNGVDIPPF--AALPSRGRRRK---------FPIL---------PDKRIILFLGR 211
Query: 484 PDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543
PKK + L++AF + + L++ D+ A L I L
Sbjct: 212 LHPKKGLDLLIEAF--AKLAERFPDWHLVIAGPDEGGY-----RAELKQIAA---ALGLE 261
Query: 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV 603
+V + D A +F+ P+ E FG+ + EA A G P+V T V
Sbjct: 262 DRVTFTGMLYGEDKAAALADAD----LFVLPSHSENFGIVVAEALACGTPVVTTDK---V 314
Query: 604 DIHRVLDNG-LLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQ-FSWPEHCKSYL 661
+++ G V D ++A AL + + Q + +NG + + FSW + L
Sbjct: 315 PWQELIEYGCGWVVDDDVDALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQLL 374
Query: 662 S 662
Sbjct: 375 E 375
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 78.0 bits (192), Expect = 6e-16
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 15/139 (10%)
Query: 477 MILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKL 536
+ + R P+K + L++AF + L + + + +L
Sbjct: 106 DKVFVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREY------------LEEL 153
Query: 537 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVA 596
+ L +V + ++ + AA VF+ P+ E FGL ++EA A GLP++A
Sbjct: 154 LAALLLLDRVIFLGGLDPEELLALLLAAAD---VFVLPSLREGFGLVVLEAMACGLPVIA 210
Query: 597 TKNGGPVDIHRVLDNGLLV 615
T GGP +I GLLV
Sbjct: 211 TDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 6e-16
Identities = 78/358 (21%), Positives = 141/358 (39%), Gaps = 76/358 (21%)
Query: 310 IHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIE 369
H ++ G ++ L +P+V T H++ D + L+R + K+ RR
Sbjct: 90 THTPFS-LGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVR--RKLSRRF- 145
Query: 370 AEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 429
+ + VI + ++I + R Y GV + VIP
Sbjct: 146 -----YNRCDAVIAPS-EKIADLLREY-----------------GVKR------PIEVIP 176
Query: 430 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKN 489
GI+ P E +P++L + R +KN
Sbjct: 177 TGIDL-------------------DRFEPVDGDD-ERRKLGIPEDEPVLLYVGRLAKEKN 216
Query: 490 ITTLVKAFGECRPLRELANLTLIM---GNRDDIDEMSGTNAALLLSILKLIDKYDLYGQV 546
I L++AF R L+E ++ L++ G + +L + L +V
Sbjct: 217 IDFLIRAF--ARLLKEEPDVKLVIVGDGP-------------EREELEELARELGLADRV 261
Query: 547 AYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIH 606
+ + ++PD Y+ A +F+ + E GL L+EA A GLP+VA G D+
Sbjct: 262 IFTGFVPREELPDYYKAA----DLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLV 317
Query: 607 RVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRI 664
+NG L P +++A+ALL+L+ D +L R +N ++ +FS+ + + +
Sbjct: 318 ADGENGFLFPP-GDEALAEALLRLLQDPELRRRLSKNAEESAEKFSFAKKVEKLYEEV 374
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 1e-15
Identities = 48/179 (26%), Positives = 100/179 (55%), Gaps = 25/179 (13%)
Query: 478 ILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKL 536
I+ +AR P+K + L+KAF + ++++ + TL I G D+ ++ + +L
Sbjct: 207 IITVARLAPEKQLDQLIKAFA--KVVKQVPDATLDIYGYGDEEEK-----------LKEL 253
Query: 537 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVA 596
I++ L V + + D+ ++Y+ A + + + E FGL+L+EA ++GLP+++
Sbjct: 254 IEELGLEDYVFLKGYTR--DLDEVYQKA----QLSLLTSQSEGFGLSLMEALSHGLPVIS 307
Query: 597 TK-NGGPVDIHRVLD--NGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFS 652
N GP +I + D NG LV D +++A+A+++L++D +L ++ + +N ++S
Sbjct: 308 YDVNYGPSEI--IEDGENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAYENAERYS 364
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 79.6 bits (197), Expect = 1e-15
Identities = 71/280 (25%), Positives = 107/280 (38%), Gaps = 79/280 (28%)
Query: 394 RLYDGFD------PVLERKLRARIKRGVSCHGRFMPRMVVIPPGIE---FHHIVRHNGDV 444
++ D P L +LRAR R R+ + P G++ FH
Sbjct: 140 WFHNRADRVLVPSPSLADELRARGFR----------RVRLWPRGVDTELFH--------- 180
Query: 445 DGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLR 504
P D + + P +P++L + R P+KN+ L+ A PLR
Sbjct: 181 ----------PRRRDEALRAR----LGPPDRPVLLYVGRLAPEKNLEALLDAD---LPLR 223
Query: 505 ELANLTLIM-G---NRDDIDEMSGTNAALLLSILKLIDKYDLYGQV---AYPKHHKQSDV 557
+ L++ G R + E N L G + + +DV
Sbjct: 224 RRPPVRLVIVGDGPARARL-EARYPNVHFL-------------GFLDGEELAAAYASADV 269
Query: 558 PDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDP 617
F+ P+ E FGL ++EA A GLP+VA GGP DI +NGLLV+P
Sbjct: 270 -------------FVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEP 316
Query: 618 HDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHC 657
D ++ A AL L++D +L R + SW
Sbjct: 317 GDAEAFAAALAALLADPELRRRMAARARAEAERRSWEAFL 356
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|131524 TIGR02471, sucr_syn_bact_C, sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Score = 74.0 bits (182), Expect = 1e-14
Identities = 60/262 (22%), Positives = 105/262 (40%), Gaps = 53/262 (20%)
Query: 773 VIAADCDTT--------SDFLEIIKKVVEAAGKDNSAGFI-GFVLSTALTILELHSLLVS 823
+I D D T + F+E++ +G G G + +A + +L
Sbjct: 1 LIITDLDNTLLGDDEGLASFVELL----RGSGDAVGFGIATGRSVESAKSRYAKLNLP-- 54
Query: 824 GGLSPLAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRW 883
SP D I G+E+YY G D ++ H ++ W R+ +V
Sbjct: 55 ---SP---DVLIARVGTEIYY---------GPELQPDRFWQKHIDHDW----RRQAVVEA 95
Query: 884 AASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQ 943
A + + +D+ ++ + P+ P + ++R+ +R Q+ VI
Sbjct: 96 LADIPG-------LTLQDDQEQGPFKISYLLD-PEGEPILPQIRQRLRQQSQAAKVIL-S 146
Query: 944 NGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI---- 999
G L V+P+ AS+ ALRYL RWG+ L ++V D E +L G+ V+
Sbjct: 147 CGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGND---EEMLRGLTLGVVVGNH 203
Query: 1000 ---LKGVGESARKLHANRNYSL 1018
L+G+ R AN ++
Sbjct: 204 DPELEGLRHQQRIYFANNPHAF 225
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. Length = 236 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 4e-14
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSG 524
E + P P+ILA+ R P+K TL++AF R A L +I+G+ +E
Sbjct: 179 EPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARL-VILGDGPLREE--- 234
Query: 525 TNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTL 584
+ L + L +V + QS+ + A +F+ + E F L
Sbjct: 235 --------LEALAKELGLADRVHFLGF--QSNPYPYLKAAD----LFVLSSRYEGFPNVL 280
Query: 585 IEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS---IADALLKLVSDKQLWERCR 641
+EA A G P+VAT GP +I +NGLLV D+ + A ALL L+ D +L ER
Sbjct: 281 LEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLDPELRERLA 340
Query: 642 QNGLKNIHQF 651
+ + +
Sbjct: 341 AAARERVARE 350
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 1e-12
Identities = 79/349 (22%), Positives = 134/349 (38%), Gaps = 92/349 (26%)
Query: 310 IHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIE 369
IH H+ + ALL P+V HS D ++KQ L K+ R ++
Sbjct: 87 IHLHFPNPLADLALLLLPRKKPVVVHWHS---D----IVKQKLL--------LKLYRPLQ 131
Query: 370 AEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 429
L A IV TS + PVL R+ R ++ VIP
Sbjct: 132 RRFLR-RADAIVATS------PNYAE---TSPVL-RRFRDKV--------------RVIP 166
Query: 430 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKN 489
G++ R P + + IW +P L + R K
Sbjct: 167 LGLDPARYPR---------------PDALEEAIWRRAAG------RPFFLFVGRLVYYKG 205
Query: 490 ITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAAL--LLSILKLIDKYDLYGQVA 547
+ L++A L + L++ ++ A L L + L L+D+ G++
Sbjct: 206 LDVLLEA------AAALPDAPLVIVGEGPLE------AELEALAAALGLLDRVRFLGRLD 253
Query: 548 YPKHHKQSDVPDIYRLAAKTKGVFINPAFI--EPFGLTLIEAAAYGLPIVATKNGG---P 602
+ + VF+ P+ E FG+ L+EA A+G P+++T+ G
Sbjct: 254 ------DEEKAALLAAC----DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSY 303
Query: 603 VDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQF 651
V++H V GL+V P D ++A+A+ +L+ D +L ER + + +
Sbjct: 304 VNLHGV--TGLVVPPGDPAALAEAIRRLLEDPELRERLGEAARERAEEE 350
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 2e-12
Identities = 51/245 (20%), Positives = 92/245 (37%), Gaps = 50/245 (20%)
Query: 424 RMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALAR 483
++ VIP GI DP ++ P++ + R
Sbjct: 268 KIRVIPNGI--------------------------DPERFAPARRARPEKEPPVVGLIGR 301
Query: 484 PDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542
P K+I T ++A R +++ + ++G D+ D +L++ L
Sbjct: 302 VVPIKDIKTFIRAAAIVR--KKIPDAEGWVIGPTDE-DP------EYAEECRELVESLGL 352
Query: 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG- 601
V K +V + V + + E L ++EA A G+P+VAT G
Sbjct: 353 EDNV---KFTGFQNVKEYLPKL----DVLVLTSISEGQPLVILEAMAAGIPVVATDVGSC 405
Query: 602 PVDIHRVLDN-----GLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQF-SWPE 655
I D G +V P D +++A A+L+L+ D +L + G K + ++ +
Sbjct: 406 RELIEGADDEALGPAGEVVPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLER 465
Query: 656 HCKSY 660
SY
Sbjct: 466 MIDSY 470
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 68.7 bits (169), Expect = 4e-12
Identities = 72/356 (20%), Positives = 128/356 (35%), Gaps = 109/356 (30%)
Query: 310 IHGHYADAGDAAALLSGAL-NVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRI 368
IH H+ A+L+ L +P FT H G+D I R
Sbjct: 83 IHAHFGTTPATVAMLASRLGGIPYSFTAH--GKD---------------------IFRSP 119
Query: 369 EAEELS--LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMV 426
+A +L L ++ V+ + R ++ R + C ++
Sbjct: 120 DAIDLDEKLARADFVVAISE-------------------YNRQQLIRLLGCDP---DKIH 157
Query: 427 VIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDP 486
V+ G++ +ER P P IL++ R
Sbjct: 158 VVHCGVD--------------LERFPPRPPPPPG-------------EPLRILSVGRLVE 190
Query: 487 KKNITTLVKAFGECRPLRELA---NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543
KK + L++A L++ L ++ G L + LI + L
Sbjct: 191 KKGLDYLLEA---LALLKDRGIDFRLDIV-----------GD-GPLRDELEALIAELGLE 235
Query: 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFI------EPFGLTLIEAAAYGLPIVAT 597
+V Q +V ++ R A +F+ P+ E + L+EA A GLP+++T
Sbjct: 236 DRVTLLGAKSQEEVRELLRAAD----LFVLPSVTAADGDREGLPVVLMEAMAMGLPVIST 291
Query: 598 KNGGPVDIHRVLD---NGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQ 650
G I +++ GLLV P D +++ADA+ +L+ D +L + G + +
Sbjct: 292 DVSG---IPELVEDGETGLLVPPGDPEALADAIERLLDDPELRREMGEAGRARVEE 344
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 68.0 bits (167), Expect = 7e-12
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 23/165 (13%)
Query: 486 PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQ 545
P K I +++ F + R +E+ L++G+ + +L + L
Sbjct: 208 PVKRIDDVIRIFAKVR--KEVPARLLLVGDGPERSPA-----------ERLARELGLQDD 254
Query: 546 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG-P-V 603
V + KQ V ++ +A +F+ P+ E FGL +EA A G+P+VA+ GG P V
Sbjct: 255 VLF--LGKQDHVEELLSIA----DLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEV 308
Query: 604 DIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI 648
H G LVD D +++A+ L L+ D +LW+ +
Sbjct: 309 VKHGE--TGFLVDVGDVEAMAEYALSLLEDDELWQEFSRAARNRA 351
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|218442 pfam05116, S6PP, Sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Score = 66.1 bits (162), Expect = 8e-12
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 35/210 (16%)
Query: 804 IGFVLSTALTILELHSLLVSGGL-SPLAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLD 862
V +T ++ LL L +P D I + G+E+YY G + D
Sbjct: 36 SLLVFATGRSLDSAKELLKEKPLPTP---DVLITSVGTEIYY---------GPSLVPDQA 83
Query: 863 YRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPP 922
++ H +Y W + + + L K + E+E R H ++ +
Sbjct: 84 WQEHLDYGWDRQAVVEAL---------AKFPGLTLQPEEEQRP--HKVSYFLDPEAAPAV 132
Query: 923 VKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGEC 982
+KEL +L+ + L VIY +G L ++P+ AS+ QALRYL +WG+ N +V C
Sbjct: 133 LKELEQLLEKRGLDVKVIY-SSGRDLDILPLRASKGQALRYLAKKWGLPPENTLV----C 187
Query: 983 GDT--DYEGLLGGVHKTVILKGVGESARKL 1010
GD+ D E +GGV V VG + +L
Sbjct: 188 GDSGNDAELFIGGVRGVV----VGNAQPEL 213
|
This family consists of Sucrose-6F-phosphate phosphohydrolase proteins found in plants and cyanobacteria. Sucrose-6(F)-phosphate phosphohydrolase catalyzes the final step in the pathway of sucrose biosynthesis. Length = 247 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 1e-10
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 578 EPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLW 637
E F L + EA A G+P++A+ GG ++ R NGLL P D + +A AL +L+ D L
Sbjct: 274 ENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLL 333
Query: 638 ERCRQNGLKNIH 649
ER R
Sbjct: 334 ERLRAGIEPPRS 345
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 2e-10
Identities = 68/272 (25%), Positives = 104/272 (38%), Gaps = 53/272 (19%)
Query: 376 DASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFH 435
DA+ TS + +W LY R+ AR +F+ R ++ G
Sbjct: 116 DAT----TSLALLLRSRWALY-----ARRRRRLARRAALFIAVSQFI-RDRLLALGFPPE 165
Query: 436 HIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVK 495
+ H VD P P R P IL + R KK L++
Sbjct: 166 KVHVHPIGVDTAKFT-------PATP----------ARRPPRILFVGRFVEKKGPLLLLE 208
Query: 496 AFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQS 555
AF L +I G+ + + AL L + G A P +
Sbjct: 209 AFARLARRVPEVRLVII-GDGPLLAALEALARAL-----GLGGRVTFLG--AQP----HA 256
Query: 556 DVPDIYRLAAKTKGVFINPAFIEP------FGLTLIEAAAYGLPIVATKNGGPVDIHRVL 609
+V ++ R A +F+ P+ P + L+EA A G+P+VAT++GG + V
Sbjct: 257 EVRELMRRAR----IFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEA--VE 310
Query: 610 D--NGLLVDPHDQQSIADALLKLVSDKQLWER 639
D GLLV D ++A AL +L++D L R
Sbjct: 311 DGETGLLVPEGDVAALAAALGRLLADPDLRAR 342
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 3e-10
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 533 ILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGL 592
+L+ + L +V + KQ DV ++ ++ +F+ P+ E FGL +EA A G+
Sbjct: 244 AEQLVRELGLTDRVLFLG--KQDDVAELLSIS----DLFLLPSEKESFGLAALEAMACGV 297
Query: 593 PIVATKNGG-P-VDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLK 646
P++A+ GG P V H V G L D D +++A+ + L+ D++L +R +
Sbjct: 298 PVIASNAGGIPEVVEHGV--TGFLCDVGDVETMAEYAISLLEDEELLQRFSAAARE 351
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 1e-09
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 559 DIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPH 618
IY A VF+ P+ E F T IEA A G P+VA GG DI G L P
Sbjct: 260 LIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPG 315
Query: 619 DQQSIADALLKLVSD----KQLWERCR 641
D + +A+ + L++D ++L E R
Sbjct: 316 DPEDLAEGIEWLLADPDEREELGEAAR 342
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 2e-09
Identities = 85/361 (23%), Positives = 141/361 (39%), Gaps = 91/361 (25%)
Query: 310 IHGH--YAD-AGDAAALLSGALNVPMVFTGHSLG--RD-KLEQLLKQGRLSRDEINTTYK 363
+H H Y AG A L P+V T HSL R K EQL +LS
Sbjct: 87 VHSHTWYTFLAGHLAKKLYD---KPLVVTAHSLEPLRPWKEEQLGGGYKLSS-------- 135
Query: 364 IMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMP 423
AE+ +++A++ VI + E+ + Y DP
Sbjct: 136 -----WAEKTAIEAADRVIAVSGGMREDILKYYPDLDP---------------------E 169
Query: 424 RMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALAR 483
++ VI +NG +D + + PD + + + +P IL + R
Sbjct: 170 KVHVI-----------YNG-IDTKEYK-------PDDG-NVVLDRYGIDRSRPYILFVGR 209
Query: 484 PDPKKNITTLVKAFGECRPLRELANLTLIMGNRD--DIDEMSGTNAALLLSILKLIDKYD 541
+K + L+ A + + + L G D ++ E ALL +
Sbjct: 210 ITRQKGVPHLLDAV---HYIPKDVQVVLCAGAPDTPEVAEEVRQAVALL--------DRN 258
Query: 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG 601
G + K + ++ ++ A VF+ P+ EP G+ +EA A G P+VA+ GG
Sbjct: 259 RTGIIWINKMLPKEELVELLSNAE----VFVCPSIYEPLGIVNLEAMACGTPVVASATGG 314
Query: 602 PVDIHRVLD--NGLLVDPHD------QQSIADALLKLVSDKQLWERCRQNGLKN-IHQFS 652
++ V+D G LV P + Q +A A+ L++D +L ++ G K +FS
Sbjct: 315 IPEV--VVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFS 372
Query: 653 W 653
W
Sbjct: 373 W 373
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 5e-09
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 583 TLIEAAAYGLPIVATKNGGPVDIHRVLD--NGLLVDPHDQQSIADALLKLVSDKQLWERC 640
L A +G P+++T G + VLD GLLV P D ++A+A+ +L++D +L +
Sbjct: 285 VLAYAIGFGKPVISTPVGHAEE---VLDGGTGLLVPPGDPAALAEAIRRLLADPELAQAL 341
Query: 641 RQNGLKNIHQFSWPE 655
R + SW
Sbjct: 342 RARAREYARAMSWER 356
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 58.8 bits (143), Expect = 7e-09
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 584 LIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQN 643
L E A G P++A+ +G ++ GL+V P D +++A A+L+L+ D + +N
Sbjct: 316 LFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERAEMGEN 375
Query: 644 GLKNIHQ-FSWPEHCKSYL 661
G + + + FS + + L
Sbjct: 376 GRRYVEEKFSREKLAERLL 394
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 1e-08
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 26/157 (16%)
Query: 478 ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGN---RDDIDEMSGTNAALLLSIL 534
ILA+ R K+ L+KAF + L LI G+ R ++ + + L
Sbjct: 191 ILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKL-LIAGDGPLRATLERL--------IKAL 241
Query: 535 KLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPI 594
L ++ L G D+ Y A +F+ + E FGL + EA A LP+
Sbjct: 242 GLSNRVKLLGLR--------DDIAAYYNAA----DLFVLSSAWEGFGLVVAEAMACELPV 289
Query: 595 VATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLV 631
VAT GG ++ V D+GL+V D +++A+ + +++
Sbjct: 290 VATDAGGVREV--VGDSGLIVPISDPEALANKIDEIL 324
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 1e-08
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 554 QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGL 613
+ DVP + + +F+ P+ E T++EA A GLP++AT GG ++ + G
Sbjct: 263 RDDVPALMQ----ALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGA 318
Query: 614 LVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQ-FSWPEHCKSYL 661
LV P D ++A AL VSD G Q FS +Y
Sbjct: 319 LVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYA 367
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 3e-08
Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 20/163 (12%)
Query: 476 PMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMG-----NRDDIDEMSGTNAALL 530
P +LA+ +P+KN L++AF R R A L + G E A L
Sbjct: 194 PYVLAVGGIEPRKNTIDLLEAFALLRARRPQAQLVIAGGATLFDYDAYRREFEARAAELG 253
Query: 531 LSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY 590
L ++ + G V +D+P +YR A F P+ E FGL ++EA A
Sbjct: 254 LDPGAVV----ITGPVP------DADLPALYRCAD----AFAFPSLKEGFGLVVLEALAS 299
Query: 591 GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSD 633
G+P+VA + P + + DP D SIADAL +
Sbjct: 300 GIPVVA-SDIAPFTEYLGRFDAAWADPSDPDSIADALALALDP 341
|
A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 2e-07
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 475 KPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSIL 534
KP+IL R K ++A + ++ ++ L++ D +L
Sbjct: 185 KPVILLPGRLTRWKGQEVFIEALARLK--KDDPDVHLLIV--GDAQGRR----FYYAELL 236
Query: 535 KLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLP 593
+LI + L +V + H SD+P Y LA + ++ + E FG T +EA A G P
Sbjct: 237 ELIKRLGLQDRVTFVGH--CSDMPAAYALAD----IVVSASTEPEAFGRTAVEAQAMGRP 290
Query: 594 IVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKL 630
++A+ +GG + R + GLLV P D +++A AL ++
Sbjct: 291 VIASDHGGARETVRPGETGLLVPPGDAEALAQALDQI 327
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 4e-07
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 535 KLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKG-VFINPAFIEPFGLTLIEAAAYGLP 593
++ +KY+L +V V D+ +G +F+N + E F + ++EAA+ GL
Sbjct: 241 EMREKYNLQDRVELLGAVPHERVRDVLV-----QGHIFLNTSLTEAFCIAIVEAASCGLL 295
Query: 594 IVATKNGGPVDIHRVLDNGL--LVDPHDQQSIADALLKLVSD 633
+V+T+ GG I VL + L +P D +SI L + +S
Sbjct: 296 VVSTRVGG---IPEVLPPDMILLAEP-DVESIVRKLEEAISI 333
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398 |
| >gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 6e-07
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 570 VFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLD--------NGLLVDPHDQQ 621
+ P+ EP GLT + A YG + + GG D V+D G L + +D
Sbjct: 368 FILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADT--VVDGDPEAESGTGFLFEEYDPG 425
Query: 622 SIADALLKLV----SDKQLWERCRQNGLKNIHQFSWPEHCKSYL 661
++ AL + + D LWE ++N + FSW + K Y+
Sbjct: 426 ALLAALSRALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYV 467
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473 |
| >gnl|CDD|109900 pfam00862, Sucrose_synth, Sucrose synthase | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 2e-06
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 46/237 (19%)
Query: 168 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGS----------MPGVYRVDLLT 217
+V++S HG N+ LG DTGGQV Y+++ RAL S + R+ ++T
Sbjct: 275 VVILSPHGYFAQANV-LGY-PDTGGQVVYILDQVRALESEMLVRIKQQGLDITPRILIVT 332
Query: 218 RQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPF----GPKDKYVQKELL 273
R + PD T + L + G + +I+R+PF G K++ + +
Sbjct: 333 RLL--PDAVGTTC----------NQRLEKVFG-TEHTHILRVPFRTEKGILRKWISRFEV 379
Query: 274 WPHIPEFV-DAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPM 332
WP++ F D A S++ E P I G+Y+D A+LL+ L V
Sbjct: 380 WPYLETFAEDVA-------SEIAAELQAK-----PDLIIGNYSDGNLVASLLAHKLGVTQ 427
Query: 333 VFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEI 389
H+L + K + + Y + A+ ++++ ++ +ITST QEI
Sbjct: 428 CTIAHALEKTK----YPDSDIYWKKFEKKYHFSCQFTADLIAMNHADFIITSTFQEI 480
|
Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. Length = 550 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.0 bits (123), Expect = 2e-06
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 473 PRKPMILALARPDPKKNITTLVKAFGECRP-LRELANLTLIM--GNRDDIDEMSGTNAAL 529
K L++ R + KKNI ++AF + L E N+ L++ G + E N
Sbjct: 209 SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAE----NVEY 264
Query: 530 LLSILKLIDKY-DLYGQVAY----PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTL 584
L + +L ++ L QV + K+ L + + + P+ E FG+
Sbjct: 265 LEELQRLAEELLLLEDQVIFLPSISDSQKEL-------LLSSARALLYTPSN-EHFGIVP 316
Query: 585 IEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNG 644
+EA G P++A +GGP++ + G L +P + A+A+LKL +D L +R G
Sbjct: 317 LEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMGAAG 375
Query: 645 LKNIHQ-FS 652
K + + FS
Sbjct: 376 RKRVKEKFS 384
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 3e-06
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 578 EPFGLTLIEAAAYG-LPIV-ATKNGG----PVDIHRVLD--NGLLVDPHDQQSIADALLK 629
EP GLT + A YG +PIV AT GG +D + G + + ++ ++ AL +
Sbjct: 381 EPCGLTQMYAMRYGTVPIVRAT--GGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRR 438
Query: 630 LVS---DKQLWERCRQNGLKNIHQFSWPEHCKSYL 661
++ D + W + ++N + FSW K YL
Sbjct: 439 ALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYL 471
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.2 bits (121), Expect = 3e-06
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 557 VPD--IYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDN--G 612
V D + L A+ + F+ PA E FG+ +EA A G P++A GG ++ V+D G
Sbjct: 250 VSDEELRDLYARARA-FLFPA-EEDFGIVPVEAMASGTPVIAYGKGGALET--VIDGVTG 305
Query: 613 LLVDPHDQQSIADALLKLVSDKQLWER--CRQNGLKNIHQFSWP 654
+L + +S+A A ++ + ++ R + +FS
Sbjct: 306 ILFEEQTVESLAAA-VERFEKNEDFDPQAIRAHAE----RFSES 344
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 3e-06
Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 30/162 (18%)
Query: 474 RKPMILALARPDPKKNITTLVK-AFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLS 532
I + L++ A R L I+G+ +
Sbjct: 1 GIVFIGGFGHAPNWDGLLWLLEEALPLLRKALPDVELH-IIGSGPE-------------E 46
Query: 533 ILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINP-AFIEPFGLTLIEAAAYG 591
+ +L G V D+ + A V + P F L L+EA A G
Sbjct: 47 LARLAPNVHFLGFVE--------DLAALLASAD----VALAPLRFGAGSPLKLLEALAAG 94
Query: 592 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSD 633
LP+VAT + G + L G+LV D + A+A+++L++D
Sbjct: 95 LPVVAT-DIGAEGLPEDLGWGVLV-ADDPEEFAEAIVRLLAD 134
|
Length = 134 |
| >gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 5e-06
Identities = 27/120 (22%), Positives = 44/120 (36%), Gaps = 16/120 (13%)
Query: 570 VFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD--IHRVLD------NGLLVDPHDQQ 621
V + P+ EP GLT + A YG + + GG D + R G L +
Sbjct: 371 VILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPD 430
Query: 622 SIADALLKLVS----DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQPRWQRS 677
+A+AL + + LW + + N + FSW K Y+ + +
Sbjct: 431 HLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKPL--LSKPFWIA 486
|
Length = 487 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 5e-06
Identities = 60/265 (22%), Positives = 101/265 (38%), Gaps = 67/265 (25%)
Query: 423 PRMVVIPPGIE-FHHIVRH--NGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMIL 479
PR V+IPP I+ R D++ +E+ + +P +P I
Sbjct: 153 PRKVIIPPSIDPLSGKNRELSPADIEYILEK------------------YGIDPERPYIT 194
Query: 480 ALARPDPKKNITTLVKAFGECRPLRELANLTLIMGN--RDDIDEMSGTNAALLLSILKLI 537
++R DP K+ ++ A+ + + L +++G+ DD +
Sbjct: 195 QVSRFDPWKDPFGVIDAYRKVKERVPDPQL-VLVGSGATDDPE----------------- 236
Query: 538 DKYDLYGQVAYPK-HHKQSDVPDIYRLAAKTKG------------VFINPAFIEPFGLTL 584
G + Y + PDI+ L V + + E FGLT+
Sbjct: 237 ------GWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTV 290
Query: 585 IEAAAYGLPIVATKNGG-PVDI-HRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQ 642
EA G P++A GG P+ I G LVD ++ A +L L+ D +L +
Sbjct: 291 TEALWKGKPVIAGPVGGIPLQIEDGE--TGFLVDTVEE--AAVRILYLLRDPELRRKMGA 346
Query: 643 NGLKNIHQ-FSWPEHCKSYLSRISS 666
N +++ + F H K YL IS
Sbjct: 347 NAREHVRENFLITRHLKDYLYLISK 371
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 3e-05
Identities = 50/209 (23%), Positives = 75/209 (35%), Gaps = 49/209 (23%)
Query: 473 PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLL 531
P + ++L R P K I L++AF + NL L ++G D G AA
Sbjct: 191 PDETVLLYAGRISPDKGILLLMQAFEKLATAHS--NLKLVVVG--DPTASSKGEKAAYQK 246
Query: 532 SILKLIDKYD----LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEA 587
+L+ + + G K H Y LA V + E F + +EA
Sbjct: 247 KVLEAAKRIGDRCIMLGGQPPEKMHN------YYPLADL---VVVPSQVEEAFCMVAVEA 297
Query: 588 AAYGLPIVATKNGG----------------PV-------DIHRVLDNGLLVDPHDQQSIA 624
A G P++A+ GG P+ DI+R L + + IA
Sbjct: 298 MAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLAD------PELTQIA 351
Query: 625 DALLKLVSDKQLWERCRQNGLKNIHQFSW 653
+ V K WE Q + IH +W
Sbjct: 352 EQAKDFVFSKYSWEGVTQRFEEQIH--NW 378
|
Length = 380 |
| >gnl|CDD|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 9e-05
Identities = 43/241 (17%), Positives = 66/241 (27%), Gaps = 83/241 (34%)
Query: 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGE 250
GG +YV+ELARAL + + V ++T + P E
Sbjct: 1 GGAERYVLELARALAAR--GHEVTVVTPR--GPPGRPELEED------------------ 38
Query: 251 SSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAI 310
G + R+P + + P +
Sbjct: 39 --GVRVHRLPVPRRPSLP---GDLRALRRLRRLLRRE------------------RPDVV 75
Query: 311 HGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEA 370
H H AG A L + VP+V T H L + L ++
Sbjct: 76 HAHGPLAGLLARLAARRRGVPVVVTPHGLALRQGSGLKRR---------------LARAL 120
Query: 371 EELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPP 430
E L ++ V+ + E E L G R+VV+P
Sbjct: 121 ERRLLRRADAVVAVSEAEAELLRAL--GVPA---------------------ARVVVVPN 157
Query: 431 G 431
G
Sbjct: 158 G 158
|
Length = 158 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 3e-04
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 570 VFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDI---HRVLDNGLLVDPHDQQSIADA 626
VF+ P+ E G ++EA A G+P+VA + GG DI + G L P D +
Sbjct: 334 VFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEK 393
Query: 627 LLKLVSDKQLWERCRQNGLKNIHQFSW 653
L L++D +L ER + + ++ W
Sbjct: 394 LETLLADPELRERMGAAAREEVEKWDW 420
|
Length = 465 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 8e-04
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 12/69 (17%)
Query: 578 EPFGLTLIEAAAYGLPIVATKNGG-P--VDIHRVLDNGLLVDPHDQQSIADALLKLVS-D 633
EPFGL +IEA A G P++A + G P V+ G LVD ++ +A A+ + D
Sbjct: 255 EPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVT---GFLVDSVEE--LAAAVARADRLD 309
Query: 634 KQLWERCRQ 642
+ CR+
Sbjct: 310 RA---ACRR 315
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 0.002
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 585 IEAAAYGLPIVATKNGGPVDIHRVL----DNGLLVDPHDQQSIADALLKLVSDKQLWERC 640
+EA A G + A+ GG HR L + G+L D ++A ALL L+ ++ W
Sbjct: 312 LEAMAQGRLVAASDVGG----HRELIRDGETGVLFPAGDPAALAAALLALLDNRAQWPEL 367
Query: 641 RQNGLK 646
R +
Sbjct: 368 RAAARR 373
|
PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397 |
| >gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.003
Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 25/128 (19%)
Query: 482 ARPDPKKNITTLVKAFGECRPLRELANLTLIMGN---RDDIDEMSGTNAALLLSILKLID 538
R +KN L++ F E A L L+ G+ ++I + L L D
Sbjct: 199 GRFSEQKNHEFLIEIFAELLKKNPNAKLLLV-GDGELEEEIKKKV--------KELGLED 249
Query: 539 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 598
K G +DVP++ + VF+ P+ E L LIEA A GLP + +
Sbjct: 250 KVIFLGVR--------NDVPELLQAM----DVFLFPSLYEGLPLVLIEAQASGLPCILSD 297
Query: 599 NGGP-VDI 605
VD+
Sbjct: 298 TITKEVDL 305
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358 |
| >gnl|CDD|99997 cd04946, GT1_AmsK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.003
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 559 DIYRLAAKTK-GVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNG----L 613
++Y+L + VF+N + E ++++EA ++G+P++AT GG ++DNG L
Sbjct: 301 EVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG---TPEIVDNGGNGLL 357
Query: 614 LVDPHDQQSIADALLKLVSD----KQLWERCRQNGLKN 647
L + +L K + + + + E+ R+ +N
Sbjct: 358 LSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEEN 395
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. Length = 407 |
| >gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 40.5 bits (96), Expect = 0.004
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Query: 578 EPFGLTLIEAAAYG-LPIVATKNGGPVD--IHRVLD----NGLLVDPHDQQSIADAL--- 627
EP GLT + A YG LPIV + GG D I + G + D + + + AL
Sbjct: 367 EPCGLTQLYALRYGTLPIVR-RTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRA 425
Query: 628 LKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYL 661
L+L LW ++ + FSW + + YL
Sbjct: 426 LELYRQPPLWRALQRQAMA--QDFSWDKSAEEYL 457
|
Length = 466 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1054 | |||
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.98 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.98 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.98 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.98 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.98 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.98 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.98 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.97 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.97 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.97 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.97 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.97 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.97 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.97 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.97 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 99.97 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.97 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.97 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.97 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.97 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.97 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.97 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.96 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.96 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.96 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.96 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.96 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.96 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.96 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.96 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.96 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.96 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.96 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.96 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.95 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.95 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.95 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.95 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.95 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.95 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.94 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.94 | |
| PLN02887 | 580 | hydrolase family protein | 99.94 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.94 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.93 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.93 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.93 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.92 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.92 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.91 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 99.91 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.91 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.9 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.9 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.9 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.87 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.87 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.86 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.86 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.85 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.85 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.85 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.84 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.83 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.83 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.82 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.78 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.78 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.76 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.75 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.75 | |
| PLN02423 | 245 | phosphomannomutase | 99.75 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.75 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.74 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.74 | |
| PLN03017 | 366 | trehalose-phosphatase | 99.71 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.7 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.69 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.68 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.68 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.67 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.65 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 99.62 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 99.58 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.58 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.58 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.5 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.37 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.37 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.26 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.24 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.24 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.23 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.21 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.19 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 99.12 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.05 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.98 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.88 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.82 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.76 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.75 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.69 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.63 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.63 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.55 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.54 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.51 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.49 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.47 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.43 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.33 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.29 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 98.17 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.12 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 98.1 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.07 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.07 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.0 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 97.99 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 97.94 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 97.92 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.87 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 97.85 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.84 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 97.78 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 97.77 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.76 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.74 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 97.74 | |
| PLN02208 | 442 | glycosyltransferase family protein | 97.68 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.61 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 97.5 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.44 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 97.33 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 97.29 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 97.26 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.25 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 97.18 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 97.13 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 97.13 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.09 | |
| PLN00414 | 446 | glycosyltransferase family protein | 97.06 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 96.99 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.91 | |
| PF08550 | 29 | DUF1752: Fungal protein of unknown function (DUF17 | 96.88 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 96.88 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 96.85 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 96.84 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 96.81 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 96.8 | |
| PLN02764 | 453 | glycosyltransferase family protein | 96.8 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 96.8 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.76 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 96.76 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 96.72 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 96.72 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 96.71 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 96.67 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.65 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.63 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 96.63 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 96.6 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 96.59 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 96.54 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 96.45 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.45 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 96.4 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 96.39 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 96.34 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 96.32 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 96.3 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 96.27 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.15 | |
| PLN02954 | 224 | phosphoserine phosphatase | 96.11 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 96.08 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.06 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 96.04 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 95.68 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 95.68 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 95.49 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 95.32 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 95.32 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 95.3 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.28 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 95.27 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 95.21 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 95.18 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 95.12 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 95.1 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 95.09 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 95.07 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 95.06 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 95.04 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 94.92 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 94.89 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 94.88 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 94.86 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 94.82 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 94.78 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.71 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 94.7 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 94.7 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 94.61 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.56 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 94.11 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.03 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 93.88 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 93.85 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 93.76 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.58 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 93.55 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 93.46 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 93.38 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 93.33 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 93.32 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 93.3 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 93.24 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 93.23 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 93.16 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 93.1 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 93.0 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 92.87 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 92.87 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 92.81 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 92.8 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 92.68 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 92.68 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 92.29 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 92.2 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 92.02 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 91.91 | |
| PRK08238 | 479 | hypothetical protein; Validated | 91.42 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 91.24 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 91.0 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 90.95 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 90.72 | |
| PRK06769 | 173 | hypothetical protein; Validated | 90.54 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 90.35 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 90.06 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 90.03 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 89.88 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 89.59 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 89.5 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 89.02 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 88.79 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 88.63 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 88.52 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 87.9 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 87.63 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 87.5 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 87.33 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 86.84 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 86.72 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 86.58 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 86.44 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 86.18 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 86.14 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 85.02 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 84.98 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 84.83 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 84.33 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 84.19 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 83.95 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 83.31 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 83.23 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 83.0 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 82.76 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 81.7 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 81.46 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 80.21 |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-209 Score=1897.35 Aligned_cols=1041 Identities=75% Similarity=1.219 Sum_probs=942.3
Q ss_pred CCCCchhhHHHHHHHhcCCCCCcccch--hhhhccCCCCCcchhhhhhhcccCcchhhHHHHHHHhhcChhhhhhhhhhh
Q 001557 1 MAGNDWVNSYLEAILDVGPGIDDAKSS--LLLRERGRFSPTRYFVEQVITGFDETDLHRSWIRAAATRSPQERNTRLENM 78 (1054)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (1054)
||||||||||||||||+|+|+++++++ +++||+|+||||||||||||||||||||||||+||+|||||||||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1050)
T TIGR02468 1 MAGNDWINSYLEAILDVGPGLDDAKSSALLLLRERGRFSPTRYFVEEVITGFDETDLHRTWVKAVATRSPQERNTRLENM 80 (1050)
T ss_pred CCcchHHHHHHHHHHhcCCCcccccccccccccccCccCCceeeEEeecccccchhhhhHHHHHHhhcChhhhhhhhhhh
Confidence 999999999999999999999999998 889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhhhhhhchHHHHHHHHHHHHHhhccchhhhhhhhccCCCCCCCCCCccccCCCCC--CCCCCCCCchhhhhh
Q 001557 79 CWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMSEDLSEGDKGDVSGELSAHGGST--RGRMPRISSVDTMEN 156 (1054)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 156 (1054)
|||||||||||||||||+|||+||||+|||+||||||+|||||||||||+|.+++.++++++. +++|||++|++.|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (1050)
T TIGR02468 81 CWRIWNLARKKKQLEWEEAQRLAKRRLERERGRREATADMSEDLSEGEKGDVAGDISVAGGEPSTKGRLPRISSNLEMET 160 (1050)
T ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhHhhcCCcccCcccccccccCCCccccccccccccchhhc
Confidence 999999999999999999999999999999999999999999999999999999999998664 799999999999999
Q ss_pred hhhhccCcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccc
Q 001557 157 WAIQYKEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEML 236 (1054)
Q Consensus 157 ~~~~~~~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l 236 (1054)
|+++++.++|||++||.||+|||+||++||++|||||.+||.+||++|+++||||+|+|+|++..+|.++++|++|.+++
T Consensus 161 ~~~~~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~ 240 (1050)
T TIGR02468 161 WSDQQKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEML 240 (1050)
T ss_pred chhhcccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999899999999999999
Q ss_pred ccccccccccccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCC
Q 001557 237 NRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD 316 (1054)
Q Consensus 237 ~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~ 316 (1054)
++...+++.+++...+|++|+|+|+||.++|++|+.+|||+.+|++.++.++.++.+.|++++..+++.+|||||+|||+
T Consensus 241 ~~~~~~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~ 320 (1050)
T TIGR02468 241 TPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYAD 320 (1050)
T ss_pred cccccccccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcch
Confidence 88777777788889999999999999997799999999999999999999999999999999888777789999999999
Q ss_pred chHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhh
Q 001557 317 AGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLY 396 (1054)
Q Consensus 317 a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y 396 (1054)
+|++++.+++.+++|+|+|+|+++..+..+++.+|..+...++..|++.+|+.+|+.++..||.|||+|++++++|+.+|
T Consensus 321 sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY 400 (1050)
T TIGR02468 321 AGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLY 400 (1050)
T ss_pred HHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHh
Confidence 99999999999999999999999999998888888877778888999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCc
Q 001557 397 DGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKP 476 (1054)
Q Consensus 397 ~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (1054)
+.++|.++++||+|+.+||+|||++++++.|||||||++.|.|.....+..............+.++.++++|+..+++|
T Consensus 401 ~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~pdkp 480 (1050)
T TIGR02468 401 DGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKP 480 (1050)
T ss_pred ccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHhhcccCCCc
Confidence 99999999999999999999999999999999999999999986543322211111123345677888999999999999
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCc
Q 001557 477 MILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSD 556 (1054)
Q Consensus 477 ~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~d 556 (1054)
+|+++||+++.||+..||+||..++.+.+.+++.+|+|++++.+.+......+..++.++++++++.++|.|+|+++.++
T Consensus 481 vIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~ed 560 (1050)
T TIGR02468 481 MILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSD 560 (1050)
T ss_pred EEEEEcCCccccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHH
Confidence 99999999999999999999999976556678878889988877777667778899999999999999999999999999
Q ss_pred HHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHH
Q 001557 557 VPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQL 636 (1054)
Q Consensus 557 l~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 636 (1054)
++.+|+.|++++|+||+||++||||++++||||||+|||+|+.||+.|+|.++.+|++|+|.|+++|+++|.+++++++.
T Consensus 561 vp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpel 640 (1050)
T TIGR02468 561 VPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQL 640 (1050)
T ss_pred HHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHHH
Confidence 99999999666789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcCCCCCCCC-CCCCCCCCCCCCCCccccccccccccccccCCCCCCC
Q 001557 637 WERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQPRWQRSD-DGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGG 715 (1054)
Q Consensus 637 ~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~~~~~~~~~~-~~~~~s~~~~~~~~lr~~~~~~~~~~~~~d~~~~~~~ 715 (1054)
+++|++++++.+++|+|+.++++|++.+..+..++|+|++.. .+.+.++++|+.+++++++||| |+||+||+.....
T Consensus 641 r~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~ 718 (1050)
T TIGR02468 641 WAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDIS--LNLSVDGDKESNN 718 (1050)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccccccCccccccccccch--hhccccccccccc
Confidence 999999999999889999999999999999999999988643 2345667889999999999999 6677777644321
Q ss_pred -CCCCCCcchhhhhccchhhhHHHHHHhhccccCCCccCccCccCCCCCcccCCCEEEEEEecCCCChhhHHHHHHHHHH
Q 001557 716 -STLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYVFVIAADCDTTSDFLEIIKKVVEA 794 (1054)
Q Consensus 716 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~kkLiv~DiDGTL~~~i~~~~~~al~~ 794 (1054)
+.+.+ ......|+..++.+++.++++...++.++.+++++.+|||.++++++|||+++|++.+....+.+++++++
T Consensus 719 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~~~~~~~l~~~~~~ 795 (1050)
T TIGR02468 719 GSSNVE---GSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDDKDLLQIIKNIFEA 795 (1050)
T ss_pred cccccc---cccchhhHHHHHHHHHhhccccccccccccccccccccCccccccceEEEEEeccCCCCChHHHHHHHHHH
Confidence 01111 11123355666677777777655567889999999999999999999999555544445577778888888
Q ss_pred HhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCCC-CCCCCCCccccCccchhhhccccCh
Q 001557 795 AGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSS-TEDNHGLPFLVDLDYRFHTEYRWGG 873 (1054)
Q Consensus 795 l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~~-~~~~~~~~~~~d~~~~~~i~~~w~~ 873 (1054)
+++....+.+.|+|+|||++.++.+++++.++++.+||++||++|++|||+..+ .++. .+.+|..|+.||.++|.+
T Consensus 796 ~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~---~~~~D~~w~~hI~~rW~g 872 (1050)
T TIGR02468 796 VRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYYPSLNGSEEG---KLVADQDYHSHIEYRWGG 872 (1050)
T ss_pred HhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCC---CceECHHHHHHHHccCCc
Confidence 874333467999999999999999999999997558999999999999997422 1112 678999999999999999
Q ss_pred hhHHHHHHHhhhhccCCCCcc-CcccccccccCcceEEEEEecCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEec
Q 001557 874 EGLRKTLVRWAASVNDKKGEE-GKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIP 952 (1054)
Q Consensus 874 e~l~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~kis~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p 952 (1054)
+.+++++.+++....+.++++ +.++.++...++.||++|++.++...+.+++|++.|++++++|+++||+++.+|||+|
T Consensus 873 e~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~d~~~~~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP 952 (1050)
T TIGR02468 873 EGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYCRNGTRLNVIP 952 (1050)
T ss_pred HHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEecCcccCccHHHHHHHHHhCCCceEEEeecCCcEeeeee
Confidence 999999999998766666555 4578888899999999999888888889999999999999999999999866999999
Q ss_pred CCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcc-hhHHhhhhccCCCcccccccCCCceEE
Q 001557 953 VLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVG-ESARKLHANRNYSLEDVISFDSHNVIQ 1031 (1054)
Q Consensus 953 ~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~-~~~~~~~~~~~~~~~d~~~~~~~~~~~ 1031 (1054)
.+||||+||+||+.+|||++++|+||+||++||||++||.+.+++|++++.+ .+++.+|+++||+++||||.+||||.+
T Consensus 953 ~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g~~~~~s~~l~~~~sY~~eDVvp~dspni~~ 1032 (1050)
T TIGR02468 953 LLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKGVVSRGSEQLHANRSYPLDDVVPLDSPNIVQ 1032 (1050)
T ss_pred CCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEecccccchhhhcccCCCcccccccCCCCCeEe
Confidence 9999999999999999999999999999999999999999999999999988 566888899999999999999999999
Q ss_pred eccccCHHHHHHHHHHhc
Q 001557 1032 VDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 1032 ~t~~~~~~gI~~al~~~~ 1049 (1054)
++++|..++|..||++||
T Consensus 1033 ~~~~~~~~di~~aL~~l~ 1050 (1050)
T TIGR02468 1033 ATGGSSSDDISDALKKLS 1050 (1050)
T ss_pred ecCCCCHHHHHHHHHhcC
Confidence 988999999999999986
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-55 Score=533.17 Aligned_cols=468 Identities=28% Similarity=0.478 Sum_probs=355.2
Q ss_pred hhhhhhhccCcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHH--------hcCCCce----EEEEEecCcC
Q 001557 154 MENWAIQYKEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARAL--------GSMPGVY----RVDLLTRQVS 221 (1054)
Q Consensus 154 ~~~~~~~~~~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aL--------a~~~Gv~----~V~vvt~~~~ 221 (1054)
++++-... +|.|||++||.||+++++| .+|+ ||||||..||.+||++| +++ | | +|+|+|+.+.
T Consensus 245 ~e~f~~~~-p~~~rIa~lS~Hg~~~~~~-~lG~-~DtGGq~vYV~elaraL~~~~~~~La~~-G-~~v~~~V~I~TR~~~ 319 (784)
T TIGR02470 245 LEAFLGRI-PMVFNVVILSPHGYFGQEN-VLGL-PDTGGQVVYILDQVRALENEMLQRIKLQ-G-LEITPKILIVTRLIP 319 (784)
T ss_pred HHHHHhhC-CccceEEEEecccccCCcc-ccCC-CCCCCceeHHHHHHHHHHHHHHHHHHhc-C-CCccceEEEEecCCC
Confidence 44443333 7789999999999998888 5997 79999999999999985 577 8 7 8889999874
Q ss_pred CCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCC-----cccccccCCCChHHHHHHHHHHHHHHHHHHh
Q 001557 222 APDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKD-----KYVQKELLWPHIPEFVDAALTHIIQISKVLG 296 (1054)
Q Consensus 222 ~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~-----~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~ 296 (1054)
+.. ...|.++.+. +...+|++|+|+|++|.. +|++|+.+|||+..|.+.+..++..-
T Consensus 320 ~~~-~~~~~~~~e~------------~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~----- 381 (784)
T TIGR02470 320 DAE-GTTCNQRLEK------------VYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAE----- 381 (784)
T ss_pred Ccc-cccccccccc------------ccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 322 2334444433 344679999999999853 47899999999999999887766421
Q ss_pred hhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhc
Q 001557 297 EQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLD 376 (1054)
Q Consensus 297 ~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~ 376 (1054)
.+.+||+||+|||++|++|..+++.+|||+++|.|+++..+.. ..|. .+......|++..++.+|..++.
T Consensus 382 ------~~~~pDlIHahy~d~glva~lla~~lgVP~v~t~HsL~~~K~~---~~g~-~~~~~e~~~~~~~r~~ae~~~~~ 451 (784)
T TIGR02470 382 ------LQGKPDLIIGNYSDGNLVASLLARKLGVTQCTIAHALEKTKYP---DSDI-YWQEFEDKYHFSCQFTADLIAMN 451 (784)
T ss_pred ------cCCCCCEEEECCCchHHHHHHHHHhcCCCEEEECCcchhhccc---cccc-ccccchhHHHhhhhhhHHHHHHh
Confidence 1146999999999999999999999999999999999776632 2222 33334557788888989999999
Q ss_pred cCCEEEecCHHHHH------HHHhhhcCCCh-HHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCccc
Q 001557 377 ASEIVITSTRQEIE------EQWRLYDGFDP-VLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVE 449 (1054)
Q Consensus 377 ~ad~Vi~~S~~~~~------~~~~~y~~~~~-~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~ 449 (1054)
.||.|||+|.+++. .|+..|..|.. .+ .++ ++-.+.+.+|+.|||||+|...|.|........ .
T Consensus 452 ~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~L-----y~v---vnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~-~ 522 (784)
T TIGR02470 452 AADFIITSTYQEIAGTKDSVGQYESHQAFTMPGL-----YRV---VHGIDVFDPKFNIVSPGADESIYFPYSDKEKRL-T 522 (784)
T ss_pred cCCEEEECcHHHhhhhhhhhhhhhhcccccccce-----eee---ecCccCCcCCeEEECCCcChhhcCCCCchhhhh-h
Confidence 99999999998865 34444544432 10 011 122333567999999999999998754321100 0
Q ss_pred ccCCC--CCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCC-chhhhhch
Q 001557 450 RDEGS--PASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDD-IDEMSGTN 526 (1054)
Q Consensus 450 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~-~~~~~~~~ 526 (1054)
..... .....+....+...++..+++|+|+++||+++.||++.+++||..+..+.+..+++ |+|++.+ ......+.
T Consensus 523 ~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LV-IVGGg~~~~~s~d~ee 601 (784)
T TIGR02470 523 NLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLV-VVAGKLDAKESKDREE 601 (784)
T ss_pred hhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEE-EEeCCcccccccchhH
Confidence 00000 00000111112223344678999999999999999999999999876555555663 5565432 22222233
Q ss_pred HHHHHHHHHHHHHcCCCCCEEeCCCC-CCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccc
Q 001557 527 AALLLSILKLIDKYDLYGQVAYPKHH-KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDI 605 (1054)
Q Consensus 527 ~~~~~~i~~l~~~~~l~~~V~~~g~~-~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~ei 605 (1054)
.....++.++++++++.++|.|+|.. +..++.++|+.++.++|+||+||++|+||++++||||||+|||+|+.||+.|+
T Consensus 602 ~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~Ei 681 (784)
T TIGR02470 602 QAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEI 681 (784)
T ss_pred HHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHH
Confidence 34678899999999999999999975 67789999986544458999999999999999999999999999999999999
Q ss_pred eeeCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHH
Q 001557 606 HRVLDNGLLVDPHDQQSIADALLKLV----SDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 606 v~~~~~Gllv~p~d~~~la~aI~~ll----~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l 664 (1054)
|.++.+|++|+|.|+++++++|.+++ +|++.|+++++++++.+ ++|||+.++++++.+.
T Consensus 682 V~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 682 IQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred hcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999999999999999999999886 69999999999999999 7999999999999876
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-54 Score=523.74 Aligned_cols=460 Identities=28% Similarity=0.474 Sum_probs=346.3
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHH--------HHHhcCCCceEE----EEEecCcCCCCCCCccC
Q 001557 163 EKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELA--------RALGSMPGVYRV----DLLTRQVSAPDVDWTYA 230 (1054)
Q Consensus 163 ~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa--------~aLa~~~Gv~~V----~vvt~~~~~p~~~~~~~ 230 (1054)
+|-|||++||+||++++.+ ++|+ ||||||..||.++| ++|+++ | ++| +|+||.+.+.. ...|.
T Consensus 277 p~~~~i~~iS~Hg~~~~~~-~lG~-~DtGGQ~vYVl~~aral~~el~~~l~~~-G-~~v~~~v~i~TR~i~~~~-~~~~~ 351 (815)
T PLN00142 277 PMVFNVVIFSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKQQ-G-LDIKPQILIVTRLIPDAK-GTTCN 351 (815)
T ss_pred hHhHhhheecccccccccc-cCCC-CCCCCceehHHHHHHHHHHHHHHHHHhc-C-CCccceeEEEEeccCCcc-CCccc
Confidence 6778999999999999988 6998 99999999998766 567778 7 765 59999875444 34556
Q ss_pred CcccccccccccccccccCCCCCeEEEEccCCCCC----cccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCc
Q 001557 231 EPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKD----KYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIW 306 (1054)
Q Consensus 231 ~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~----~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~ 306 (1054)
++.+.+ ...++++|+|+|++|.. ++++|+.+|||+..|.+.+..++... ...+
T Consensus 352 ~~~e~v------------~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~-----------~~~~ 408 (815)
T PLN00142 352 QRLEKV------------SGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAE-----------LQGK 408 (815)
T ss_pred Ccceec------------cCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCCC
Confidence 655443 44679999999999953 56699999999999999887776431 1145
Q ss_pred ceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCH
Q 001557 307 PVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTR 386 (1054)
Q Consensus 307 pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~ 386 (1054)
||+||+|||++|++|..+++.+|||+|+|+|+++..+.. ..| ..+......|++..|+.+|..++..||.||++|.
T Consensus 409 PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~---~~~-~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~ 484 (815)
T PLN00142 409 PDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---DSD-IYWKKFDDKYHFSCQFTADLIAMNHADFIITSTY 484 (815)
T ss_pred CCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhcc---ccC-CcccccchhhhhhhchHHHHHHHHhhhHHHhCcH
Confidence 999999999999999999999999999999999877753 222 3444566788888999999999999999999999
Q ss_pred HHHH------HHHhhhcCCC-hHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCC--CCC
Q 001557 387 QEIE------EQWRLYDGFD-PVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGS--PAS 457 (1054)
Q Consensus 387 ~~~~------~~~~~y~~~~-~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~--~~~ 457 (1054)
+++. .|+..|..|. |.+ +|+-.| .+.+.+++.|||+|+|...|.|...... ....+-+. ...
T Consensus 485 qEi~g~~~~i~qy~sh~~f~~p~L-----~rvv~G---Id~~~~ki~VVppGvD~~~F~P~~~~~~-rl~~l~n~I~~~l 555 (815)
T PLN00142 485 QEIAGSKDTVGQYESHTAFTLPGL-----YRVVHG---IDVFDPKFNIVSPGADMSIYFPYTEKQK-RLTSLHPSIEELL 555 (815)
T ss_pred HHHhcccchhhhhhcccccccchh-----hhhhcc---ccccccCeeEECCCCChhhcCCCChHHh-hHHhhcccchhhc
Confidence 9886 3444444432 332 233333 3345669999999999999986432110 00000000 000
Q ss_pred CCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecC-CCchhhhhchHHHHHHHHHH
Q 001557 458 PDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNR-DDIDEMSGTNAALLLSILKL 536 (1054)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~-~~~~~~~~~~~~~~~~i~~l 536 (1054)
..+....+...++..+++|+|+++||+++.||++.+|+|+..+.++.+..++ +|+|++ +.......+......++.++
T Consensus 556 ~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~L-VIVGgg~d~~~s~d~ee~~el~~L~~L 634 (815)
T PLN00142 556 YSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNL-VVVGGFIDPSKSKDREEIAEIKKMHSL 634 (815)
T ss_pred CChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEE-EEEECCccccccccHHHHHHHHHHHHH
Confidence 0111111222233456788999999999999999999999988654444455 356665 22111111122345778899
Q ss_pred HHHcCCCCCEEeCCCCC-CCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEe
Q 001557 537 IDKYDLYGQVAYPKHHK-QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV 615 (1054)
Q Consensus 537 ~~~~~l~~~V~~~g~~~-~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv 615 (1054)
++++++.++|.|.|.+. .....++|+..+...|+||+||++||||++++||||||+|||+|+.||+.|+|.++.+|++|
T Consensus 635 a~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV 714 (815)
T PLN00142 635 IEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHI 714 (815)
T ss_pred HHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEe
Confidence 99999999999998654 33344444422111299999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHH
Q 001557 616 DPHDQQSIADALLKLV----SDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll----~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l 664 (1054)
+|.|+++++++|.+++ +|++.|++++++|++.+ ++|||+.++++++++.
T Consensus 715 ~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 715 DPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999987654 69999999999999999 7999999999999866
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-52 Score=490.83 Aligned_cols=436 Identities=52% Similarity=0.884 Sum_probs=341.1
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCce--EEEEEecCcCCCCCCCccCCcccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVY--RVDLLTRQVSAPDVDWTYAEPSEMLNRKNTEN 243 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~--~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~ 243 (1054)
+||++||.||++++.|+.+|+.|+.||++.|+.+|+++|+++ | | +|+|+|+....+.+...|..+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~~La~~L~~~-G-~~~~V~v~t~~~~~~~~~~~~~~~~~--------- 69 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARR-S-EVEQVDLVTRLIKDAKVSPDYAQPIE--------- 69 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHHHHHHHHHhC-C-CCcEEEEEeccccCcCCCCccCCCee---------
Confidence 589999999999999999999999999999999999999999 7 6 99999976432222222322221
Q ss_pred cccccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHH
Q 001557 244 LMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAAL 323 (1054)
Q Consensus 244 ~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~ 323 (1054)
...+|+.|+|+|+++. .+..+..+|+++..|...+...+.+ ...+|||||+|++.++.++.+
T Consensus 70 -----~~~~gv~v~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~~~DvIH~h~~~~~~~~~~ 131 (439)
T TIGR02472 70 -----RIAPGARIVRLPFGPR-RYLRKELLWPYLDELADNLLQHLRQ------------QGHLPDLIHAHYADAGYVGAR 131 (439)
T ss_pred -----EeCCCcEEEEecCCCC-CCcChhhhhhhHHHHHHHHHHHHHH------------cCCCCCEEEEcchhHHHHHHH
Confidence 1136999999998876 4555566677766655444443321 013599999999888889988
Q ss_pred HHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHH
Q 001557 324 LSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403 (1054)
Q Consensus 324 l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l 403 (1054)
+++..++|+|+|.|+++......+...+. ....+...|.+..++..|+.+++.+|.||++|..+..++...+.++.+
T Consensus 132 ~~~~~~~p~V~t~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~-- 208 (439)
T TIGR02472 132 LSRLLGVPLIFTGHSLGREKRRRLLAAGL-KPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQP-- 208 (439)
T ss_pred HHHHhCCCEEEecccccchhhhhcccCCC-ChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCc--
Confidence 99999999999999875543222222222 222233344555666678889999999999998766655444433332
Q ss_pred HHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeC
Q 001557 404 ERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALAR 483 (1054)
Q Consensus 404 ~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgR 483 (1054)
.++.+||||||.+.|.|..... ........+++++..++.++|+++||
T Consensus 209 -------------------~ki~vIpnGvd~~~f~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~i~~vGr 256 (439)
T TIGR02472 209 -------------------ERMQVIPPGVDLSRFYPPQSSE-------------ETSEIDNLLAPFLKDPEKPPILAISR 256 (439)
T ss_pred -------------------cceEEECCCcChhhcCCCCccc-------------cchhHHHHHHhhccccCCcEEEEEcC
Confidence 3899999999999998643111 11112233344555677889999999
Q ss_pred CCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 001557 484 PDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 563 (1054)
Q Consensus 484 ld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~ 563 (1054)
+.+.||++.+|+||..+..+.+.+++.+|+|++++.+.+.....++...+..+++++++.++|.|+|+++.++++.+|+.
T Consensus 257 l~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~ 336 (439)
T TIGR02472 257 PDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRL 336 (439)
T ss_pred CcccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHH
Confidence 99999999999999876433444667667788887666665556667788889999999999999999999999999998
Q ss_pred hhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001557 564 AAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQN 643 (1054)
Q Consensus 564 Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1054)
|+...|+||+||..|+||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++++++|.+++++++.+++++++
T Consensus 337 a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~ 416 (439)
T TIGR02472 337 AARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRN 416 (439)
T ss_pred HhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 74445899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-hcCCHHHHHHHHHHHHH
Q 001557 644 GLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 644 ~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
+++.+ ++|||+.++++|+++++
T Consensus 417 a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 417 GIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhC
Confidence 99998 79999999999998863
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-49 Score=492.13 Aligned_cols=569 Identities=14% Similarity=0.139 Sum_probs=392.0
Q ss_pred ccccCCCChHH----------HHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHcc-CCCCEEEEeC
Q 001557 269 QKELLWPHIPE----------FVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGH 337 (1054)
Q Consensus 269 ~k~~l~~~l~~----------f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~-~~iP~V~t~H 337 (1054)
.+..+||.+.. ...........++..+.+.+.. -|+|..|++...+++.++.+. ...++-|..|
T Consensus 91 ~n~~lWp~~H~~~~~~~~~~~~w~~Y~~vN~~fA~~~~~~~~~-----~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH 165 (726)
T PRK14501 91 CNSTLWPLFHYFPEYTEFEDRFWESYERVNQRFAEAIAAIARP-----GDVVWVHDYQLMLLPAMLRERLPDARIGFFLH 165 (726)
T ss_pred hhccccchhcccCcccCcCHHHHHHHHHHHHHHHHHHHHhcCC-----CCEEEEeCchhhhHHHHHHhhCCCCcEEEEee
Confidence 45667775432 2223333344455666655332 389999998777888887654 3678999999
Q ss_pred CCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHh-Hhcccc
Q 001557 338 SLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRAR-IKRGVS 416 (1054)
Q Consensus 338 ~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r-~~~gv~ 416 (1054)
-.++...- +. ...+.+.| -..+-.+|+|-+.|...+..+..... +.+... ...++.
T Consensus 166 ~pfP~~~~-f~------------~lp~~~~l---l~~ll~~Dligf~t~~~~r~Fl~~~~-------~~l~~~~~~~~~~ 222 (726)
T PRK14501 166 IPFPSFEV-FR------------LLPWREEI---LEGLLGADLIGFHTYDYVRHFLSSVL-------RVLGYETELGEIR 222 (726)
T ss_pred CCCCChHH-Hh------------hCCChHHH---HHHHhcCCeEEeCCHHHHHHHHHHHH-------HHcCCccCCCeEE
Confidence 87764421 10 01111111 23578999999999988877655322 111100 122455
Q ss_pred cCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHH
Q 001557 417 CHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKA 496 (1054)
Q Consensus 417 ~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A 496 (1054)
..|+.. ++.++|+|||++.|.+..... ........++.. .+++++|+++||+++.||+..+|+|
T Consensus 223 ~~gr~~-~v~v~p~GID~~~f~~~~~~~-------------~~~~~~~~lr~~--~~~~~~il~VgRl~~~Kgi~~~l~A 286 (726)
T PRK14501 223 LGGRIV-RVDAFPMGIDYDKFHNSAQDP-------------EVQEEIRRLRQD--LRGRKIILSIDRLDYTKGIPRRLLA 286 (726)
T ss_pred ECCEEE-EEEEEECeEcHHHHHHHhcCc-------------hHHHHHHHHHHH--cCCCEEEEEecCcccccCHHHHHHH
Confidence 556554 799999999999998642110 000111112222 2577899999999999999999999
Q ss_pred HHhcccccCCC--cEEE-EEec----C-CCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCC
Q 001557 497 FGECRPLRELA--NLTL-IMGN----R-DDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTK 568 (1054)
Q Consensus 497 ~~~l~~~~~~~--~l~L-IiG~----~-~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~ 568 (1054)
|+.+.+.++.. +++| ++|. + +++++++....+..++|+...+..++.+.+++.+++++++++++|+.|
T Consensus 287 ~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~a---- 362 (726)
T PRK14501 287 FERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAA---- 362 (726)
T ss_pred HHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhc----
Confidence 99987555543 3444 4442 2 445566666666667777777777777888899999999999999999
Q ss_pred cEEEecCCCCCCcHHHHHHHHc-----CCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHH
Q 001557 569 GVFINPAFIEPFGLTLIEAAAY-----GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDK-QLWERCRQ 642 (1054)
Q Consensus 569 dv~v~ps~~Egfgl~l~EAmA~-----G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~-~~~~~~~~ 642 (1054)
|+||+||++||||++++||||| |+||+++.+|++.+++ +|++|+|+|++++|++|.++|+++ +++.+..+
T Consensus 363 Dv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~ 438 (726)
T PRK14501 363 DVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPNDIEGIAAAIKRALEMPEEEQRERMQ 438 (726)
T ss_pred cEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999 6689999999999884 599999999999999999999965 45555556
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCc
Q 001557 643 NGLKNIHQFSWPEHCKSYLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDNSL 722 (1054)
Q Consensus 643 ~~~~~v~~fsw~~~a~~yl~~l~~~~~~~~~~~~~~~~~~~s~~~~~~~~lr~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 722 (1054)
++++.+..|||..|+++|++.|.++...+....... +.
T Consensus 439 ~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~~~~--------------------~~---------------------- 476 (726)
T PRK14501 439 AMQERLRRYDVHKWASDFLDELREAAEKNKAFASKP--------------------IT---------------------- 476 (726)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcccccc--------------------CC----------------------
Confidence 788888899999999999999998765432111000 00
Q ss_pred chhhhhccchhhhHHHHHHhhccccCCCccCccCccCCCCCcccCCCEEEEEEecCCCC--------hhhHHHHHHHHHH
Q 001557 723 DTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYVFVIAADCDTT--------SDFLEIIKKVVEA 794 (1054)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~kkLiv~DiDGTL~--------~~i~~~~~~al~~ 794 (1054)
....+.++.+|+.++ +|||++|+||||. ..+++.++++|++
T Consensus 477 ---------~~~~~~~~~~y~~~~----------------------~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~ 525 (726)
T PRK14501 477 ---------PAAAEEIIARYRAAS----------------------RRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRR 525 (726)
T ss_pred ---------ccCHHHHHHHHHhcc----------------------ceEEEEecCccccCCCCCcccCCCCHHHHHHHHH
Confidence 112456777776633 4999999999993 2478999999999
Q ss_pred HhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCCCCCCCCCCccccCccchhh--hccccC
Q 001557 795 AGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFH--TEYRWG 872 (1054)
Q Consensus 795 l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~~~~~~~~~~~~~d~~~~~~--i~~~w~ 872 (1054)
|.++ +|+.|+|+|||++..+.+++..+++ ++||+||++|+.+++ .|... ....|
T Consensus 526 L~~d---~g~~V~ivSGR~~~~l~~~~~~~~l------~liaenG~~i~~~~~--------------~w~~~~~~~~~w- 581 (726)
T PRK14501 526 LAAD---PNTDVAIISGRDRDTLERWFGDLPI------HLVAEHGAWSRAPGG--------------EWQLLEPVATEW- 581 (726)
T ss_pred HHcC---CCCeEEEEeCCCHHHHHHHhCCCCe------EEEEeCCEEEeCCCC--------------ceEECCCcchhH-
Confidence 9986 6899999999999999999987665 699999999986541 12111 12334
Q ss_pred hhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCc---cHHHHHHHHHHh--cCeEEEEEeeCCeE
Q 001557 873 GEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIP---PVKELRKLMRIQ--ALRCHVIYCQNGTK 947 (1054)
Q Consensus 873 ~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~---~~~el~~~l~~~--~~~~~v~~s~~~~~ 947 (1054)
.+.+..++..+...... ..++. ...+++|++.+.+... ..+++...+... ...+.++ +++ ++
T Consensus 582 ~~~v~~il~~~~~~~~g-------s~ie~----k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~-~g~-~~ 648 (726)
T PRK14501 582 KDAVRPILEEFVDRTPG-------SFIEE----KEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVL-RGN-KV 648 (726)
T ss_pred HHHHHHHHHHHHhcCCC-------cEEEE----cceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEE-ECC-eE
Confidence 34444444433322111 11111 1356777775433111 123455555442 2234433 344 59
Q ss_pred EEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCc---ceEEEecCcc
Q 001557 948 LHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV---HKTVILKGVG 1004 (1054)
Q Consensus 948 lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~a---g~gVaMgNa~ 1004 (1054)
+||+|+++|||.|+++|++ +++++.+++ +||+.| | ++||+.+ +.+|+|||+.
T Consensus 649 veV~p~~vnKG~al~~ll~--~~~~d~vl~-~GD~~n-D-e~Mf~~~~~~~~~v~vG~~~ 703 (726)
T PRK14501 649 VEVRPAGVNKGRAVRRLLE--AGPYDFVLA-IGDDTT-D-EDMFRALPETAITVKVGPGE 703 (726)
T ss_pred EEEEECCCCHHHHHHHHHh--cCCCCEEEE-ECCCCC-h-HHHHHhcccCceEEEECCCC
Confidence 9999999999999999999 777777777 888888 8 9999986 7999999866
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-47 Score=469.14 Aligned_cols=542 Identities=13% Similarity=0.093 Sum_probs=383.7
Q ss_pred HHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHH
Q 001557 289 IQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRR 367 (1054)
Q Consensus 289 ~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~r 367 (1054)
..++..+.+.+.. -|+|-.|++...+++.++.+. ..+++.|..|..++..-- +. .....+.
T Consensus 135 ~~FA~~i~~~~~~-----~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~-fr------------~lp~r~~ 196 (797)
T PLN03063 135 RMFLDVVKENYEE-----GDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEI-YK------------TLPSRSE 196 (797)
T ss_pred HHHHHHHHHhcCC-----CCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHH-Hh------------hCCCHHH
Confidence 3445555554322 379999998777787777654 568999999987664411 10 0001111
Q ss_pred HHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHh-HhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCC
Q 001557 368 IEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRAR-IKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDG 446 (1054)
Q Consensus 368 i~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r-~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~ 446 (1054)
| -..+-.||+|-+.|..++..+..... +.|... ...++...|+.. ++.+||+|||++.|.+.....
T Consensus 197 i---l~gll~aDligF~t~~y~r~Fl~~~~-------r~l~~~~~~~~i~~~gr~~-~I~viP~GID~~~f~~~~~~~-- 263 (797)
T PLN03063 197 L---LRAVLTADLIGFHTYDFARHFLSACT-------RILGVEGTHEGVVDQGKVT-RVAVFPIGIDPERFINTCELP-- 263 (797)
T ss_pred H---HHHHhcCCEEEeCCHHHHHHHHHHHH-------HHhCccccCCceEECCeEE-EEEEEecccCHHHHHHHhcCh--
Confidence 1 23578999999999999888765332 111111 123455555555 799999999999887532110
Q ss_pred cccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE------ecCCC
Q 001557 447 EVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM------GNRDD 518 (1054)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~LIi------G~~~~ 518 (1054)
........++..+ .++++|+++||+++.||+..+|+||+.+.+.++.. +++|+. |+++.
T Consensus 264 -----------~~~~~~~~lr~~~--~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~ 330 (797)
T PLN03063 264 -----------EVKQHMKELKRFF--AGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPE 330 (797)
T ss_pred -----------hHHHHHHHHHHhc--CCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHH
Confidence 0011111222222 46889999999999999999999999997666654 355543 23445
Q ss_pred chhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCC----E
Q 001557 519 IDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLP----I 594 (1054)
Q Consensus 519 ~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~P----V 594 (1054)
++.++....+...+|+...+..++.+.+++.++++.+++.++|+.| ||||+||++|||||+++||||||+| +
T Consensus 331 y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~A----DvfvvtSlrEGmnLv~lEamA~g~p~~gvl 406 (797)
T PLN03063 331 YQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAIT----DVMLVTSLRDGMNLVSYEFVACQKAKKGVL 406 (797)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhC----CEEEeCccccccCcchhhHheeecCCCCCE
Confidence 5566665566666666666667788888888899999999999999 9999999999999999999999998 9
Q ss_pred EEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcCCC
Q 001557 595 VATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQPR 673 (1054)
Q Consensus 595 Iat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~~~~~ 673 (1054)
|+|..+|..+.+ +.+|++|||+|++++|+||.++|+ ++++++++.+.+++++..|+|..|++.|++.|.++...+..
T Consensus 407 VlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~ 484 (797)
T PLN03063 407 VLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAEL 484 (797)
T ss_pred EeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhh
Confidence 999888888875 457999999999999999999999 66677777888888899999999999999999877643321
Q ss_pred CCCCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCcchhhhhccchhhhHHHHHHhhccccCCCccC
Q 001557 674 WQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKA 753 (1054)
Q Consensus 674 ~~~~~~~~~~s~~~~~~~~lr~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1054)
..... +. .-..+.++.+|+++++
T Consensus 485 ~~~~~--------------------~~-------------------------------~l~~~~~~~~y~~a~~------ 507 (797)
T PLN03063 485 RTRNI--------------------PL-------------------------------ELPEQDVIQQYSKSNN------ 507 (797)
T ss_pred cccCC--------------------CC-------------------------------CCCHHHHHHHHHhccC------
Confidence 11000 00 1123457777777444
Q ss_pred ccCccCCCCCcccCCCEEEEEEecCCCC-----------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHH
Q 001557 754 DHNVASGKFPALRRRKYVFVIAADCDTT-----------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLV 822 (1054)
Q Consensus 754 ~~~~~~~~~p~~~~~kkLiv~DiDGTL~-----------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~ 822 (1054)
++|++|+||||. ..+++.+.++|++|.++ ++..|+|.|||+...+..++.
T Consensus 508 ----------------rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d---~~~~V~IvSGR~~~~L~~~~~ 568 (797)
T PLN03063 508 ----------------RLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSD---PKTTVVVLSRSGKDILDKNFG 568 (797)
T ss_pred ----------------eEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcC---CCCEEEEEeCCCHHHHHHHhC
Confidence 999999999992 23778999999999987 788899999999999999998
Q ss_pred hCCCCCCCCcEEEEcCCcEEEcCCCCCCCCCCCccccCccchh----hhccccCh---hhHHHHHHHhhhhccCCCCccC
Q 001557 823 SGGLSPLAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRF----HTEYRWGG---EGLRKTLVRWAASVNDKKGEEG 895 (1054)
Q Consensus 823 ~l~l~~~~~d~lI~~nGa~I~~~~~~~~~~~~~~~~~d~~~~~----~i~~~w~~---e~l~~~~~~~~~~~~~~~~~~~ 895 (1054)
..++ +++++||+++..+++ .|.. .....|.. ..++.+..++|++..+.|
T Consensus 569 ~~~l------~l~aeHG~~~r~~~~--------------~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K---- 624 (797)
T PLN03063 569 EYNI------WLAAENGMFLRHTSG--------------EWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKS---- 624 (797)
T ss_pred CCCC------cEEEeCCEEEecCCC--------------ceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEc----
Confidence 7666 599999999875431 1211 11223432 346677778888877665
Q ss_pred cccccccccCcceEEEEEecCCCCC---ccHHHHHHHHHHh---cCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHh-
Q 001557 896 KIVEEDESRSTIHCYAFEVTNPQMI---PPVKELRKLMRIQ---ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRW- 968 (1054)
Q Consensus 896 ~~v~~~~~~~~~~kis~~~~~~~~~---~~~~el~~~l~~~---~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~- 968 (1054)
.+.++||++..+.. ..+.++...+... ...+.+ ..+...+||.|.++|||.|++.|++++
T Consensus 625 -----------~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v--~~Gk~vvEvrp~gvnKG~Av~~ll~~~~ 691 (797)
T PLN03063 625 -----------ETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDV--VRGQKSVEVHAIGVTKGAAIGRILGEIV 691 (797)
T ss_pred -----------CeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEE--EECCeEEEEEcCCCChHHHHHHHHHHhh
Confidence 67788998765322 2344555554221 123444 344459999999999999999999986
Q ss_pred -----CCCccCEEEEeCcC-CCccccccccCcce
Q 001557 969 -----GIDLSNVVVIAGEC-GDTDYEGLLGGVHK 996 (1054)
Q Consensus 969 -----gI~~e~vvaf~GD~-~d~D~~eML~~ag~ 996 (1054)
+-+. +++.++||. ++ | |+||+..+.
T Consensus 692 ~~~~~~~~~-dfvl~~Gdd~~~-D-EdmF~~l~~ 722 (797)
T PLN03063 692 HNKSMTTPI-DFVFCSGYFLEK-D-EDVYTFFEP 722 (797)
T ss_pred hccccCCCC-CEEEEeCCCCCC-c-HHHHHhccc
Confidence 2233 355447775 66 8 999998764
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=449.05 Aligned_cols=559 Identities=14% Similarity=0.105 Sum_probs=389.8
Q ss_pred HHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHH
Q 001557 288 IIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMR 366 (1054)
Q Consensus 288 i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ 366 (1054)
...++.++.+.+... =|+|-.|++...+++.++.+. ...++-|..|..++..-- + ....+..
T Consensus 187 N~~FA~~v~~~~~~~----~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~ei-f------------r~LP~r~ 249 (854)
T PLN02205 187 NKIFADRIMEVINPE----DDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI-Y------------KTLPIRE 249 (854)
T ss_pred HHHHHHHHHHHhCCC----CCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHH-H------------hhCCcHH
Confidence 344555555543210 179999998777777777654 467899999987664411 1 1111111
Q ss_pred HHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhH-----hcccccCCCCCCcEEEeCCCCcCCCcccCC
Q 001557 367 RIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI-----KRGVSCHGRFMPRMVVIPPGIEFHHIVRHN 441 (1054)
Q Consensus 367 ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~-----~~gv~~~g~~~~rv~vIPnGID~~~f~~~~ 441 (1054)
.| -..+-.||+|-+.|..++..+..... |.|+.+. ..|+...|+.. ++.++|.|||+..|....
T Consensus 250 ei---L~glL~aDlIGFht~~yar~Fl~~~~-------r~lgl~~~~~~g~~~~~~~Gr~v-~v~~~PigId~~~~~~~~ 318 (854)
T PLN02205 250 EL---LRALLNSDLIGFHTFDYARHFLSCCS-------RMLGLSYESKRGYIGLEYYGRTV-SIKILPVGIHMGQLQSVL 318 (854)
T ss_pred HH---HHHHhcCCeEEecCHHHHHHHHHHHH-------HHhCCcccCCCcceeEEECCcEE-EEEEEeCeEcHHHHHHHh
Confidence 11 23577999999999999887765322 2222221 13556667776 799999999999886422
Q ss_pred CCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE------
Q 001557 442 GDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM------ 513 (1054)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~LIi------ 513 (1054)
.. .......++++..+..+++++|+.++|+|+.|||...+.||++|++.+|.. +++||.
T Consensus 319 ~~-------------~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr 385 (854)
T PLN02205 319 SL-------------PETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPAR 385 (854)
T ss_pred cC-------------hhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC
Confidence 11 011223344444443357899999999999999999999999998777765 455532
Q ss_pred ecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHc---
Q 001557 514 GNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY--- 590 (1054)
Q Consensus 514 G~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~--- 590 (1054)
+.+++|++++.+..+.+++||+..++.++.+.+++...++++++.++|+.| ||+|++|++|||||+.+||+||
T Consensus 386 ~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~A----Dv~lVT~lRDGMNLva~Eyia~~~~ 461 (854)
T PLN02205 386 GKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVA----ECCLVTAVRDGMNLIPYEYIISRQG 461 (854)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhc----cEEEeccccccccccchheeEEccC
Confidence 456788899999999999999999999999999999999999999999999 9999999999999999999987
Q ss_pred -----------------CCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHH-HHHHHHHHHHhcCC
Q 001557 591 -----------------GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWE-RCRQNGLKNIHQFS 652 (1054)
Q Consensus 591 -----------------G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~-~~~~~~~~~v~~fs 652 (1054)
|+.|++..+|+..++ ..+++|||+|++++|+||.++|+++...+ ...+..++++..++
T Consensus 462 ~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L----~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d 537 (854)
T PLN02205 462 NEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL----SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHD 537 (854)
T ss_pred ccccccccccccccCCCCceEeeeccchhHHh----CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCC
Confidence 678889999998888 46899999999999999999999766544 44455556669999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCccccccccccccc-cccCCCCCCCCCCCCCcchhhhhccc
Q 001557 653 WPEHCKSYLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKL-SLEGDKNEGGSTLDNSLDTEENAVTG 731 (1054)
Q Consensus 653 w~~~a~~yl~~l~~~~~~~~~~~~~~~~~~~s~~~~~~~~lr~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~ 731 (1054)
...|++.|+..+......+........+ +.+++++ .+|-. . .
T Consensus 538 ~~~W~~~fl~~l~~~~~~~~~~~~~~~g------------------~g~~~~~~~~~~~---~----------------~ 580 (854)
T PLN02205 538 VGYWARSFLQDLERTCRDHSRRRCWGIG------------------FGLSFRVVALDPN---F----------------R 580 (854)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccc------------------ccccccccccccc---c----------------c
Confidence 9999999999998764322111000000 0000000 00000 0 1
Q ss_pred hhhhHHHHHHhhccccCCCccCccCccCCCCCcccCCCEEEEEEecCCCC------hhhHHHHHHHHHHHhccCCCCceE
Q 001557 732 KNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYVFVIAADCDTT------SDFLEIIKKVVEAAGKDNSAGFIG 805 (1054)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~kkLiv~DiDGTL~------~~i~~~~~~al~~l~~~~~~~gi~ 805 (1054)
.-..+.++.+|++++. ++|++|+||||. ..+++.++++|++|.+. +++.
T Consensus 581 ~l~~~~i~~~y~~~~~----------------------rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d---~g~~ 635 (854)
T PLN02205 581 KLSMEHIVSAYKRTTT----------------------RAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRD---KNNM 635 (854)
T ss_pred ccCHHHHHHHHHhhcC----------------------eEEEEecCCcccCCccccCCCCHHHHHHHHHHHhc---CCCE
Confidence 2334667888877444 999999999992 35788999999998665 6899
Q ss_pred EEEEcCCCHHHHHHHHHhCC-CCCCCCcEEEEcCCcEEEcCCCCCCCCCCCccccCccchh---hhccccCh---hhHHH
Q 001557 806 FVLSTALTILELHSLLVSGG-LSPLAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRF---HTEYRWGG---EGLRK 878 (1054)
Q Consensus 806 fvIaTGR~~~~i~~~l~~l~-l~~~~~d~lI~~nGa~I~~~~~~~~~~~~~~~~~d~~~~~---~i~~~w~~---e~l~~ 878 (1054)
|+|+|||++..+.+++..+. + ++||+||+++..++. ..|.. .....|.. ..+..
T Consensus 636 VaIvSGR~~~~L~~~f~~~~~l------~laaEHG~~ir~~~~-------------~~w~~~~~~~~~~w~~~v~~i~~~ 696 (854)
T PLN02205 636 VFIVSARSRKTLADWFSPCEKL------GIAAEHGYFLRLKRD-------------VEWETCVPVADCSWKQIAEPVMQL 696 (854)
T ss_pred EEEEeCCCHHHHHHHhCCCCCe------EEEEeCCEEEEeCCC-------------ceeeecchhhhHHHHHHHHHHHHH
Confidence 99999999999999997753 4 699999999987642 11210 01112321 12233
Q ss_pred HHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCc---cHHHHHHHHHHhcCe-EEEEEeeCCeEEEEecCC
Q 001557 879 TLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIP---PVKELRKLMRIQALR-CHVIYCQNGTKLHVIPVL 954 (1054)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~---~~~el~~~l~~~~~~-~~v~~s~~~~~lEV~p~~ 954 (1054)
+..+.+++..+.+ ...+++++++.+... ..+++...+...... ...+.++. ..+||.|++
T Consensus 697 y~ertpGs~IE~K---------------~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~-~vvEV~p~g 760 (854)
T PLN02205 697 YTETTDGSTIEDK---------------ETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQ-NIVEVKPQG 760 (854)
T ss_pred HhcCCCchhheec---------------ceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECC-cEEEEEeCC
Confidence 3444455554433 567778876543111 123455544432111 12244444 499999999
Q ss_pred CCHHHHHHHHHH---HhCCCccCEEEEeCcCCCccccccccCcc
Q 001557 955 ASRSQALRYLHV---RWGIDLSNVVVIAGECGDTDYEGLLGGVH 995 (1054)
Q Consensus 955 asKg~AL~~L~~---~~gI~~e~vvaf~GD~~d~D~~eML~~ag 995 (1054)
+|||.|++.|++ ++|++++.+++ +||+.| | ++||+.++
T Consensus 761 vnKG~Al~~Ll~~~~~~g~~~d~vl~-~GDD~n-D-edMF~~~~ 801 (854)
T PLN02205 761 VSKGLVAKRLLSIMQERGMLPDFVLC-IGDDRS-D-EDMFEVIT 801 (854)
T ss_pred CCHHHHHHHHHHHHHhcCCCcccEEE-EcCCcc-H-HHHHHHhh
Confidence 999999999985 46999988888 777777 7 99999876
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-44 Score=441.00 Aligned_cols=547 Identities=13% Similarity=0.112 Sum_probs=390.8
Q ss_pred HHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHH
Q 001557 289 IQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRR 367 (1054)
Q Consensus 289 ~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~r 367 (1054)
..++..+.+.+.. =|+|-+|++...+++.++.+. ...++-|..|..++..- .+ ......+.
T Consensus 219 ~~FA~~i~~~~~~-----gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~E-if------------r~LP~r~e 280 (934)
T PLN03064 219 QMFADVVNEHYEE-----GDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSE-IH------------RTLPSRSE 280 (934)
T ss_pred HHHHHHHHHhcCC-----CCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChH-HH------------hhCCcHHH
Confidence 3445555554322 379999998777888887654 46788999998766441 11 01111111
Q ss_pred HHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHh-HhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCC
Q 001557 368 IEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRAR-IKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDG 446 (1054)
Q Consensus 368 i~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r-~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~ 446 (1054)
| -..+-.||+|-+.|..++..+..... +.|... ...||...|+.. ++.++|.|||++.|.......
T Consensus 281 l---L~glL~aDlIGFqT~~y~rhFl~~c~-------rlLg~~~~~~~v~~~Gr~v-~V~~~PiGID~~~f~~~~~~~-- 347 (934)
T PLN03064 281 L---LRSVLAADLVGFHTYDYARHFVSACT-------RILGLEGTPEGVEDQGRLT-RVAAFPIGIDSDRFIRALETP-- 347 (934)
T ss_pred H---HHHHhcCCeEEeCCHHHHHHHHHHHH-------HHhCccccCCeEEECCEEE-EEEEEeCEEcHHHHHHHhcCh--
Confidence 1 23577999999999999887765332 122111 123566677665 789999999999998432110
Q ss_pred cccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE------ecCCC
Q 001557 447 EVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM------GNRDD 518 (1054)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~LIi------G~~~~ 518 (1054)
.......+++..+ .++++|++++|+|+.|||...|+||+.|++.+|.+ +++||. ++++.
T Consensus 348 -----------~v~~~~~~lr~~~--~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~e 414 (934)
T PLN03064 348 -----------QVQQHIKELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPE 414 (934)
T ss_pred -----------hHHHHHHHHHHHh--CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHH
Confidence 1112223333333 46789999999999999999999999997767765 354431 55667
Q ss_pred chhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHc-----CCC
Q 001557 519 IDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY-----GLP 593 (1054)
Q Consensus 519 ~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~-----G~P 593 (1054)
|+.++.+..+.+++|+..++..++.+.+++...++++++.++|+.| ||||+||++|||||+.+||||| |++
T Consensus 415 Y~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~A----DV~lvTslrDGmNLva~Eyva~~~~~~GvL 490 (934)
T PLN03064 415 YQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDSKKGVL 490 (934)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhC----CEEEeCccccccCchHHHHHHhhcCCCCCe
Confidence 8888888999999999999999999999999999999999999999 9999999999999999999999 788
Q ss_pred EEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcCC
Q 001557 594 IVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQP 672 (1054)
Q Consensus 594 VIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~~~~ 672 (1054)
|++..+|+...+ +.++++|||+|++++|++|.++|+ ++++++++.+.+++.+..|||..|++.|++.+..+...+.
T Consensus 491 ILSEfaGaa~~L---~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~~~~ 567 (934)
T PLN03064 491 ILSEFAGAAQSL---GAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEAQ 567 (934)
T ss_pred EEeCCCchHHHh---CCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhhhh
Confidence 886667766665 347999999999999999999999 6777788888888999999999999999999987643221
Q ss_pred CCCCCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCcchhhhhccchhhhHHHHHHhhccccCCCcc
Q 001557 673 RWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQK 752 (1054)
Q Consensus 673 ~~~~~~~~~~~s~~~~~~~~lr~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1054)
...... . +.-..+.++.+|+++++
T Consensus 568 ~~~~~~---------------------~------------------------------~~l~~~~~~~~y~~a~~----- 591 (934)
T PLN03064 568 LRTRQV---------------------P------------------------------PQLPPEDAIQRYLQSNN----- 591 (934)
T ss_pred cccccc---------------------C------------------------------CCCCHHHHHHHHHhccc-----
Confidence 100000 0 01123557777776444
Q ss_pred CccCccCCCCCcccCCCEEEEEEecCCCC-----h------------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHH
Q 001557 753 ADHNVASGKFPALRRRKYVFVIAADCDTT-----S------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL 815 (1054)
Q Consensus 753 ~~~~~~~~~~p~~~~~kkLiv~DiDGTL~-----~------------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~ 815 (1054)
++|++|+||||. . .+++.++++|++|.+. ++..|+|.|||+..
T Consensus 592 -----------------RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d---p~n~VaIVSGR~~~ 651 (934)
T PLN03064 592 -----------------RLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD---PKTTIVVLSGSDRS 651 (934)
T ss_pred -----------------eEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC---CCCeEEEEeCCCHH
Confidence 999999999992 1 2568899999999987 78899999999999
Q ss_pred HHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCCCCCCCCC--CccccCccchhhhccccChhhHHHHHHHhhhhccCCCCc
Q 001557 816 ELHSLLVSGGLSPLAFDAFICNSGSELYYPSSSTEDNHG--LPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGE 893 (1054)
Q Consensus 816 ~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~~~~~~~~--~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~ 893 (1054)
.+..++..+++ +++++||+++..+++ .|. .....+..|...+ ...++.+..++|++.++.|
T Consensus 652 ~Le~~fg~~~L------~LaAEHG~~~R~~~~----~w~~~~~~~~~~~W~~~v-----~~ile~~~eRtPGS~IE~K-- 714 (934)
T PLN03064 652 VLDENFGEFDM------WLAAENGMFLRHTKG----EWMTTMPEHLNMDWVDSV-----KHVFEYFTERTPRSHFETR-- 714 (934)
T ss_pred HHHHHhCCCCc------eEEeeCCeEEecCCC----cceeccccccchHHHHHH-----HHHHHHHHhcCCCcEEEEc--
Confidence 99999988876 599999999976531 010 0000112232221 2345677778888877665
Q ss_pred cCcccccccccCcceEEEEEecCCCCC---ccHHHHHHHHHHh---cCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHH
Q 001557 894 EGKIVEEDESRSTIHCYAFEVTNPQMI---PPVKELRKLMRIQ---ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVR 967 (1054)
Q Consensus 894 ~~~~v~~~~~~~~~~kis~~~~~~~~~---~~~~el~~~l~~~---~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~ 967 (1054)
.+.++||++..+.. ..+.++.+.+... ...+.+ ..+...+||.|.++|||.|++.|+.+
T Consensus 715 -------------~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V--~~Gk~VVEVrP~gvnKG~Av~~ll~~ 779 (934)
T PLN03064 715 -------------ETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDV--VQGSRSVEVRPVGVTKGAAIDRILGE 779 (934)
T ss_pred -------------CcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEE--EeCCeEEEEEcCCCCHHHHHHHHHHh
Confidence 67788888765311 1244555555221 223444 34445999999999999999999997
Q ss_pred hC----C-CccCEEEEeCcCCCccccccccCcc
Q 001557 968 WG----I-DLSNVVVIAGECGDTDYEGLLGGVH 995 (1054)
Q Consensus 968 ~g----I-~~e~vvaf~GD~~d~D~~eML~~ag 995 (1054)
+. . ..-++|.++||+-.|| ++||+...
T Consensus 780 ~~~~~~~~~~~DFvlc~GDd~~~D-EdmF~~l~ 811 (934)
T PLN03064 780 IVHSKSMTTPIDYVLCIGHFLGKD-EDIYTFFE 811 (934)
T ss_pred hhhccccCCCCCEEEEeCCCCCCc-HHHHHHHh
Confidence 62 1 1224566588865447 99999764
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-41 Score=404.81 Aligned_cols=518 Identities=18% Similarity=0.186 Sum_probs=339.0
Q ss_pred hhhhhHHHHH--hhhh-----hhhhchHHHHHHHHHHHHHhhccchhhhhhhhccCCCCCCCCCCccccCCCCCCCCCCC
Q 001557 75 LENMCWRIWN--LARK-----KKQIEGEEAQRKAKRRLERERGRKEASADMSEDLSEGDKGDVSGELSAHGGSTRGRMPR 147 (1054)
Q Consensus 75 ~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (1054)
-..|-|.+|- |-|= .+-|--+||.-+-+--|.|+..-.++--+... ..+ .++
T Consensus 408 ~~~~~~~~~~~lll~id~~~~~~~~~~~~a~~lr~~~~~~~~~~~~~~~~~~~----~~~----~~~------------- 466 (977)
T PLN02939 408 ADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKG----KNE----REA------------- 466 (977)
T ss_pred hhhCCHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHhhhhhHHHHHHHHhc----Cch----HHH-------------
Confidence 4579999994 2221 22277778887777777777776666655422 000 111
Q ss_pred CCchhhhhhhhhhccCcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCC
Q 001557 148 ISSVDTMENWAIQYKEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 227 (1054)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~ 227 (1054)
.+ ....+....+.++|||++||.... |+ ..+||...++..|+++|+++ | |+|.|+++.+..-....
T Consensus 467 -~~--~~~~~~~~~~~~~mkILfVasE~a----P~-----aKtGGLaDVv~sLPkAL~~~-G-hdV~VIlP~Y~~i~~~~ 532 (977)
T PLN02939 467 -VE--NFLKLTLSGTSSGLHIVHIAAEMA----PV-----AKVGGLADVVSGLGKALQKK-G-HLVEIVLPKYDCMQYDQ 532 (977)
T ss_pred -HH--HHHHhccCCCCCCCEEEEEEcccc----cc-----cccccHHHHHHHHHHHHHHc-C-CeEEEEeCCCcccChhh
Confidence 11 444555656678899999998765 33 78999999999999999999 8 99999998764322111
Q ss_pred ccCCcc-c-cc--cc-ccccccccccCCCCCeEEEEccCC-CCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcC
Q 001557 228 TYAEPS-E-ML--NR-KNTENLMQGLGESSGAYIIRIPFG-PKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGS 301 (1054)
Q Consensus 228 ~~~~~~-~-~l--~~-~~~~~~~~~~~~~~g~~i~rip~g-~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~ 301 (1054)
..+... + .+ +. +......-.....+|+.++.|... |. .|..+..++.+- |.+.++.. +.++..+.+..
T Consensus 533 ~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~-~fF~R~~iYg~~----Dn~~RF~~-FsrAaLe~~~~ 606 (977)
T PLN02939 533 IRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS-KFFWRAQYYGEH----DDFKRFSY-FSRAALELLYQ 606 (977)
T ss_pred hhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch-hccCCCCCCCCc----cHHHHHHH-HHHHHHHHHHh
Confidence 000000 0 00 00 000000001122357888877632 21 244444555442 33333332 23333333322
Q ss_pred CCCCcceEEEEcCCCchHHHHHHHc------cCCCCEEEEeCCCccchHH---HHHHhCCCChhhhhhHh----HHHHHH
Q 001557 302 GQPIWPVAIHGHYADAGDAAALLSG------ALNVPMVFTGHSLGRDKLE---QLLKQGRLSRDEINTTY----KIMRRI 368 (1054)
Q Consensus 302 ~~~~~pDVIh~h~~~a~~~a~~l~~------~~~iP~V~t~H~l~~~~~~---~l~~~g~~~~~~i~~~~----~~~~ri 368 (1054)
. ..+|||||||+|.+++++.++.. ..++|+|+|+|++.++... .+-..| +....+...- .+..++
T Consensus 607 ~-~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lG-L~~~~l~~~d~le~~~~~~i 684 (977)
T PLN02939 607 S-GKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCG-LDVHQLDRPDRMQDNAHGRI 684 (977)
T ss_pred c-CCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcC-CCHHHccChhhhhhccCCch
Confidence 1 25799999999999987443322 2468999999999665421 111111 1111110000 011223
Q ss_pred HHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCC-C--
Q 001557 369 EAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDV-D-- 445 (1054)
Q Consensus 369 ~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~-~-- 445 (1054)
..-+..+..||.|+|+|+.+++++...+.. +++.. ++.+..++.+||||||++.|.|..... +
T Consensus 685 N~LK~GIv~AD~VtTVSptYA~EI~te~G~---GL~~~-----------L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~ 750 (977)
T PLN02939 685 NVVKGAIVYSNIVTTVSPTYAQEVRSEGGR---GLQDT-----------LKFHSKKFVGILNGIDTDTWNPSTDRFLKVQ 750 (977)
T ss_pred HHHHHHHHhCCeeEeeeHHHHHHHHHHhcc---chHHH-----------hccccCCceEEecceehhhcCCccccccccc
Confidence 333456778999999999999887652221 12222 233345899999999999999764211 0
Q ss_pred CcccccCCCCCCCCCchhHHHhhhcCC---CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhh
Q 001557 446 GEVERDEGSPASPDPPIWSEIMHFFSN---PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEM 522 (1054)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~ 522 (1054)
.....+. . ......+.+.+++.+ ++.|+|++|||+.+.||++.+++|+..+.. ....+ +|+|+|++.
T Consensus 751 Ys~~dl~--G--K~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqL-VIvGdGp~~--- 820 (977)
T PLN02939 751 YNANDLQ--G--KAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQF-VLLGSSPVP--- 820 (977)
T ss_pred cChhhhh--h--hhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEE-EEEeCCCcH---
Confidence 0000000 0 001112233445544 357999999999999999999999988753 22333 477988641
Q ss_pred hhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCc
Q 001557 523 SGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP 602 (1054)
Q Consensus 523 ~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~ 602 (1054)
.+...+..++.+++..++|.|+|.++......+|+.| |+||+||.+||||++++|||+||+|+|++++||.
T Consensus 821 -----~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaA----DIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL 891 (977)
T PLN02939 821 -----HIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAAS----DMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGL 891 (977)
T ss_pred -----HHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhC----CEEEECCCccCCcHHHHHHHHCCCCEEEecCCCC
Confidence 2356678889999988899999998766678999999 9999999999999999999999999999999999
Q ss_pred ccceee---------CCceEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001557 603 VDIHRV---------LDNGLLVDPHDQQSIADALLKLVS----DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 603 ~eiv~~---------~~~Gllv~p~d~~~la~aI~~ll~----d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~ 669 (1054)
.|+|.+ +.+|++|+|.|+++|+++|.+++. +++.|++++++++. +.|||+..+++|.++|..+..
T Consensus 892 ~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYeeLY~~ll~ 969 (977)
T PLN02939 892 NDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYEELYQRAVA 969 (977)
T ss_pred cceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHH
Confidence 999865 468999999999999999999875 79999999887653 689999999999999998875
Q ss_pred c
Q 001557 670 R 670 (1054)
Q Consensus 670 ~ 670 (1054)
+
T Consensus 970 ~ 970 (977)
T PLN02939 970 R 970 (977)
T ss_pred h
Confidence 4
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=387.87 Aligned_cols=444 Identities=20% Similarity=0.226 Sum_probs=286.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
|||++||.+.++ . ..+||+..+|..|+++|+++ | |+|+|+|+.+..-. ....... .+.....-...
T Consensus 1 m~i~~vs~e~~P----~-----~k~GGl~~~v~~L~~~L~~~-G-~~V~v~~p~y~~~~--~~~~~~~-~~~~~~~~~~~ 66 (466)
T PRK00654 1 MKILFVASECAP----L-----IKTGGLGDVVGALPKALAAL-G-HDVRVLLPGYPAIR--EKLRDAQ-VVGRLDLFTVL 66 (466)
T ss_pred CeEEEEEccccc----C-----cccCcHHHHHHHHHHHHHHC-C-CcEEEEecCCcchh--hhhcCce-EEEEeeeEEEE
Confidence 899999998762 1 56899999999999999999 8 99999998643210 0000000 00000000000
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 325 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~ 325 (1054)
......+|+++++++.. .+..+..++++.... .++.. +.+...+.+... ..+|||||+|+|.++.++.+++
T Consensus 67 ~~~~~~~gv~v~~v~~~---~~~~~~~~y~~~d~~----~r~~~-f~~~~~~~~~~~-~~~pDiiH~h~w~~~~~~~~l~ 137 (466)
T PRK00654 67 FGHLEGDGVPVYLIDAP---HLFDRPSGYGYPDNG----ERFAF-FSWAAAEFAEGL-DPRPDIVHAHDWHTGLIPALLK 137 (466)
T ss_pred EEeEEcCCceEEEEeCH---HHcCCCCCCCCcChH----HHHHH-HHHHHHHHHHhc-CCCCceEEECCcHHHHHHHHHH
Confidence 00012468999988763 344455555544332 11110 111111111111 1469999999999999998887
Q ss_pred cc-----CCCCEEEEeCCCccchH---HHHHHhCCCChhhhh-hHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhh
Q 001557 326 GA-----LNVPMVFTGHSLGRDKL---EQLLKQGRLSRDEIN-TTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLY 396 (1054)
Q Consensus 326 ~~-----~~iP~V~t~H~l~~~~~---~~l~~~g~~~~~~i~-~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y 396 (1054)
.. .++|+|+|.|++..+.. ..+-..| +...... ....+...+...+.++..||.|+|+|+.+.+++...+
T Consensus 138 ~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~ 216 (466)
T PRK00654 138 EKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELG-LPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPE 216 (466)
T ss_pred HhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcC-CChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhcccc
Confidence 55 37999999999864321 1110011 0110000 0000001122345678999999999998887765432
Q ss_pred cCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCC-CchhHHHhhhcCC-CC
Q 001557 397 DGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPD-PPIWSEIMHFFSN-PR 474 (1054)
Q Consensus 397 ~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~ 474 (1054)
.++ ++...+ +....++.+||||||.+.|.|..... ....+........ ......+.++..+ ++
T Consensus 217 ~~~--gl~~~~-----------~~~~~ki~vI~NGid~~~~~p~~~~~--~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~ 281 (466)
T PRK00654 217 FGY--GLEGLL-----------RARSGKLSGILNGIDYDIWNPETDPL--LAANYSADDLEGKAENKRALQERFGLPDDD 281 (466)
T ss_pred CCc--ChHHHH-----------HhcccCceEecCCCCccccCCccCcc--cccccChhhhhchHHHHHHHHHHhCCCCCC
Confidence 111 111111 11223899999999999998753211 0000000000000 0011223344443 36
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEE-eCCCCC
Q 001557 475 KPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVA-YPKHHK 553 (1054)
Q Consensus 475 ~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~-~~g~~~ 553 (1054)
.++|+++||+.+.||++.+++|+.++.+ +..++ +|+|+++. .+...+.+++.+++. ++. +.++ +
T Consensus 282 ~~~i~~vGRl~~~KG~~~li~a~~~l~~--~~~~l-vivG~g~~---------~~~~~l~~l~~~~~~--~v~~~~g~-~ 346 (466)
T PRK00654 282 APLFAMVSRLTEQKGLDLVLEALPELLE--QGGQL-VLLGTGDP---------ELEEAFRALAARYPG--KVGVQIGY-D 346 (466)
T ss_pred CcEEEEeeccccccChHHHHHHHHHHHh--cCCEE-EEEecCcH---------HHHHHHHHHHHHCCC--cEEEEEeC-C
Confidence 7899999999999999999999999853 23333 46687652 234567778888763 454 4554 4
Q ss_pred CCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeC------CceEEeCCCCHHHHHHHH
Q 001557 554 QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVL------DNGLLVDPHDQQSIADAL 627 (1054)
Q Consensus 554 ~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~------~~Gllv~p~d~~~la~aI 627 (1054)
.+.++.+|+.| |++|+||.+||||++++|||+||+|+|+++.||+.|+|.++ .+|++|+|.|+++++++|
T Consensus 347 ~~~~~~~~~~a----Dv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i 422 (466)
T PRK00654 347 EALAHRIYAGA----DMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRAL 422 (466)
T ss_pred HHHHHHHHhhC----CEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHH
Confidence 45567899999 99999999999999999999999999999999999999887 899999999999999999
Q ss_pred HHHHh---CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001557 628 LKLVS---DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 628 ~~ll~---d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~ 669 (1054)
.+++. +++.+.++++++++ +.|||+..+++|+++|+++..
T Consensus 423 ~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 423 RRALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHHHHhh
Confidence 99887 77778888877754 689999999999999998753
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=396.08 Aligned_cols=424 Identities=17% Similarity=0.150 Sum_probs=285.6
Q ss_pred cCcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcc-ccccccc
Q 001557 162 KEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPS-EMLNRKN 240 (1054)
Q Consensus 162 ~~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~-~~l~~~~ 240 (1054)
++.+|+||+||.+.. |+ ..+||+..+|..|+++|+++ | |+|+|+++.+............. ..+..+.
T Consensus 584 ~~~pM~Il~VSsE~~----P~-----aKvGGLgDVV~sLp~ALa~~-G-h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~ 652 (1036)
T PLN02316 584 KEPPMHIVHIAVEMA----PI-----AKVGGLGDVVTSLSRAVQDL-N-HNVDIILPKYDCLNLSHVKDLHYQRSYSWGG 652 (1036)
T ss_pred CCCCcEEEEEEcccC----CC-----CCcCcHHHHHHHHHHHHHHc-C-CEEEEEecCCcccchhhcccceEEEEeccCC
Confidence 345799999999876 33 57899999999999999999 8 99999998764321100000000 0000000
Q ss_pred ccccccccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHH
Q 001557 241 TENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDA 320 (1054)
Q Consensus 241 ~~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~ 320 (1054)
. .+.-.....+|+.++++.... .+.....++.+. +.+.++.. +.++..+.+... ..+|||||||+|.++++
T Consensus 653 ~-~~~v~~~~~~GV~vyfl~~~~--~~F~r~~~Yg~~----Dd~~RF~~-F~~Aale~l~~~-~~~PDIIHaHDW~talv 723 (1036)
T PLN02316 653 T-EIKVWFGKVEGLSVYFLEPQN--GMFWAGCVYGCR----NDGERFGF-FCHAALEFLLQS-GFHPDIIHCHDWSSAPV 723 (1036)
T ss_pred E-EEEEEEEEECCcEEEEEeccc--cccCCCCCCCch----hHHHHHHH-HHHHHHHHHHhc-CCCCCEEEECCChHHHH
Confidence 0 000001223578888776421 122233333332 22222221 222222222111 25799999999999999
Q ss_pred HHHHHcc------CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHh
Q 001557 321 AALLSGA------LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR 394 (1054)
Q Consensus 321 a~~l~~~------~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~ 394 (1054)
+++++.. .++|+|+|+|++.... +.+ +.++..||.|+|+|+.+++++..
T Consensus 724 a~llk~~~~~~~~~~~p~V~TiHnl~~~~-------------------n~l------k~~l~~AD~ViTVS~tya~EI~~ 778 (1036)
T PLN02316 724 AWLFKDHYAHYGLSKARVVFTIHNLEFGA-------------------NHI------GKAMAYADKATTVSPTYSREVSG 778 (1036)
T ss_pred HHHHHHhhhhhccCCCCEEEEeCCcccch-------------------hHH------HHHHHHCCEEEeCCHHHHHHHHh
Confidence 8887653 4689999999874311 011 13578999999999998887654
Q ss_pred hhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCC-CCc--ccccCCCCCCCCCchhHHHhhhcC
Q 001557 395 LYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDV-DGE--VERDEGSPASPDPPIWSEIMHFFS 471 (1054)
Q Consensus 395 ~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 471 (1054)
.+. +. ....++.+||||||++.|.|..... +.. ..... . .........+.++..
T Consensus 779 ~~~-l~-------------------~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~-~--gK~~~k~~Lr~~lGL 835 (1036)
T PLN02316 779 NSA-IA-------------------PHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVV-E--GKRAAKEALQQRLGL 835 (1036)
T ss_pred ccC-cc-------------------cccCCEEEEECCccccccCCcccccccccCCchhhh-h--hhhhhHHHHHHHhCC
Confidence 321 00 0113899999999999998753211 000 00000 0 000001122344544
Q ss_pred C-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCC--CCCEEe
Q 001557 472 N-PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDL--YGQVAY 548 (1054)
Q Consensus 472 ~-~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l--~~~V~~ 548 (1054)
+ ++.|+|++||||.+.||++.|++|+..+.+ ....+ +|+|+|++. .+...+..++.++++ .++|.|
T Consensus 836 ~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~ql-VIvG~Gpd~--------~~e~~l~~La~~Lg~~~~~rV~f 904 (1036)
T PLN02316 836 KQADLPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQV-VLLGSAPDP--------RIQNDFVNLANQLHSSHHDRARL 904 (1036)
T ss_pred CcccCeEEEEEeccccccCHHHHHHHHHHHhh--cCcEE-EEEeCCCCH--------HHHHHHHHHHHHhCccCCCeEEE
Confidence 4 367999999999999999999999998853 33344 467888652 235678888888865 468888
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeC-------------CceEEe
Q 001557 549 PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVL-------------DNGLLV 615 (1054)
Q Consensus 549 ~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~-------------~~Gllv 615 (1054)
.+..+......+|+.| |+||+||++||||++++|||+||+|+|++++||++|+|.++ .+|++|
T Consensus 905 ~g~~de~lah~iyaaA----DiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf 980 (1036)
T PLN02316 905 CLTYDEPLSHLIYAGA----DFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSF 980 (1036)
T ss_pred EecCCHHHHHHHHHhC----cEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEe
Confidence 8775433334799999 99999999999999999999999999999999999999874 589999
Q ss_pred CCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhh
Q 001557 616 DPHDQQSIADALLKLVSD-KQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSCK 668 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~~ 668 (1054)
++.|+++|+.+|.+++.+ ++....++..+++.+ +.|||+..|++|+++|+.++
T Consensus 981 ~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 981 DGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred CCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 999999999999999986 344555677777777 68999999999999998764
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=374.49 Aligned_cols=402 Identities=25% Similarity=0.360 Sum_probs=291.9
Q ss_pred EEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccc
Q 001557 168 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQG 247 (1054)
Q Consensus 168 Illis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~ 247 (1054)
|++++.|.. |...+-..+.||.+.++.+|+++|+++ | |+|+|+|+....+. + +.
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~GG~e~~v~~la~~L~~~-G-~~V~v~~~~~~~~~-----~-~~-------------- 54 (405)
T TIGR03449 1 VAMISMHTS----PLQQPGTGDAGGMNVYILETATELARR-G-IEVDIFTRATRPSQ-----P-PV-------------- 54 (405)
T ss_pred CeEEeccCC----ccccCCCcCCCCceehHHHHHHHHhhC-C-CEEEEEecccCCCC-----C-Cc--------------
Confidence 577888876 333332345699999999999999999 8 99999997521110 0 00
Q ss_pred cCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHcc
Q 001557 248 LGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA 327 (1054)
Q Consensus 248 ~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~ 327 (1054)
....+|+.+++++.++.. ...... +. ..+..+...+.+.+.. . ...+||+||+|++..+.+++.+++.
T Consensus 55 ~~~~~~~~v~~~~~~~~~-~~~~~~----~~---~~~~~~~~~~~~~~~~---~-~~~~~Diih~h~~~~~~~~~~~~~~ 122 (405)
T TIGR03449 55 VEVAPGVRVRNVVAGPYE-GLDKED----LP---TQLCAFTGGVLRAEAR---H-EPGYYDLIHSHYWLSGQVGWLLRDR 122 (405)
T ss_pred cccCCCcEEEEecCCCcc-cCCHHH----HH---HHHHHHHHHHHHHHhh---c-cCCCCCeEEechHHHHHHHHHHHHh
Confidence 112358999998775542 111110 11 1111111111111111 1 1246999999998778888888888
Q ss_pred CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHH
Q 001557 328 LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 407 (1054)
Q Consensus 328 ~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l 407 (1054)
.++|+|+|.|+++..+...+..... ......+ ..|...++.+|.|+++|+...+.+...|..
T Consensus 123 ~~~p~v~t~h~~~~~~~~~~~~~~~-------~~~~~~~--~~e~~~~~~~d~vi~~s~~~~~~~~~~~~~--------- 184 (405)
T TIGR03449 123 WGVPLVHTAHTLAAVKNAALADGDT-------PEPEARR--IGEQQLVDNADRLIANTDEEARDLVRHYDA--------- 184 (405)
T ss_pred cCCCEEEeccchHHHHHHhccCCCC-------CchHHHH--HHHHHHHHhcCeEEECCHHHHHHHHHHcCC---------
Confidence 8999999999875322111100000 0001111 135667899999999999877766554432
Q ss_pred HHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCC
Q 001557 408 RARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPK 487 (1054)
Q Consensus 408 ~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~ 487 (1054)
...++.+||||+|.+.|.+.+ ......++..++++++|+++||+.+.
T Consensus 185 -------------~~~ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~~~~~~i~~~G~l~~~ 231 (405)
T TIGR03449 185 -------------DPDRIDVVAPGADLERFRPGD--------------------RATERARLGLPLDTKVVAFVGRIQPL 231 (405)
T ss_pred -------------ChhhEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCCCCCcEEEEecCCCcc
Confidence 112899999999998886431 01122334445678899999999999
Q ss_pred CCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhc
Q 001557 488 KNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 566 (1054)
Q Consensus 488 Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~ 566 (1054)
||++.+++|+..+.+..+..++.+ |+|+..... ......+.+++.++++.++|.|.|+++.+++..+|+.|
T Consensus 232 K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g------~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~a-- 303 (405)
T TIGR03449 232 KAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSG------LATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAA-- 303 (405)
T ss_pred cCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCc------chHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhC--
Confidence 999999999999865444434665 667532100 01245678889999999999999999999999999999
Q ss_pred CCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001557 567 TKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLK 646 (1054)
Q Consensus 567 ~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 646 (1054)
|++|+||..|+||++++|||+||+|||+++.||..|++.++.+|++++|.|+++++++|.+++++++.++++++++++
T Consensus 304 --d~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 304 --DVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred --CEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHHHhh
Q 001557 647 NIHQFSWPEHCKSYLSRISSCK 668 (1054)
Q Consensus 647 ~v~~fsw~~~a~~yl~~l~~~~ 668 (1054)
.+++|||+.++++|+++|.++.
T Consensus 382 ~~~~fsw~~~~~~~~~~y~~~~ 403 (405)
T TIGR03449 382 HAAGFSWAATADGLLSSYRDAL 403 (405)
T ss_pred HHHhCCHHHHHHHHHHHHHHHh
Confidence 8888999999999999999765
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=378.08 Aligned_cols=453 Identities=19% Similarity=0.178 Sum_probs=289.0
Q ss_pred cceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCc-cccccccccc
Q 001557 164 KKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEP-SEMLNRKNTE 242 (1054)
Q Consensus 164 ~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~-~~~l~~~~~~ 242 (1054)
++||||+||.... |+ ..|||...++..|.++|+++ | |+|.|+++.+..-... ..... ...++.....
T Consensus 2 ~~~~il~v~~E~~----p~-----~k~ggl~dv~~~lp~~l~~~-g-~~v~v~~P~y~~~~~~-~~~~~~~~~~~~~~~~ 69 (485)
T PRK14099 2 TPLRVLSVASEIF----PL-----IKTGGLADVAGALPAALKAH-G-VEVRTLVPGYPAVLAG-IEDAEQVHSFPDLFGG 69 (485)
T ss_pred CCcEEEEEEeccc----cc-----cCCCcHHHHHHHHHHHHHHC-C-CcEEEEeCCCcchhhh-hcCceEEEEEeeeCCc
Confidence 4699999999766 33 89999999999999999999 8 9999999865322100 00000 0001000000
Q ss_pred ccccccCCCCCeEEEEccCCCCCcccccc-cCCCC--hHHHHHHHHHHHHHHHHHHhhhhcCC-CCCcceEEEEcCCCch
Q 001557 243 NLMQGLGESSGAYIIRIPFGPKDKYVQKE-LLWPH--IPEFVDAALTHIIQISKVLGEQVGSG-QPIWPVAIHGHYADAG 318 (1054)
Q Consensus 243 ~~~~~~~~~~g~~i~rip~g~~~~~l~k~-~l~~~--l~~f~~~~l~~i~~~~k~L~~~~~~~-~~~~pDVIh~h~~~a~ 318 (1054)
.+.-.....+|+.++.+... .|..+. .++.. ...+.|.+.+++. +.++..+.+... ...+|||||+|+|.++
T Consensus 70 ~~~~~~~~~~~v~~~~~~~~---~~f~r~~~~y~~~~~~~~~d~~~rf~~-f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~ 145 (485)
T PRK14099 70 PARLLAARAGGLDLFVLDAP---HLYDRPGNPYVGPDGKDWPDNAQRFAA-LARAAAAIGQGLVPGFVPDIVHAHDWQAG 145 (485)
T ss_pred eEEEEEEEeCCceEEEEeCh---HhhCCCCCCCCCccCCCCCcHHHHHHH-HHHHHHHHHhhhccCCCCCEEEECCcHHH
Confidence 00000011246666665432 222222 12211 1123355555543 233333332221 1367999999999999
Q ss_pred HHHHHHHc--cCCCCEEEEeCCCccchH---HHHHHhCCCChhhhh-hHhHHHHHHHHHHhhhccCCEEEecCHHHHHHH
Q 001557 319 DAAALLSG--ALNVPMVFTGHSLGRDKL---EQLLKQGRLSRDEIN-TTYKIMRRIEAEELSLDASEIVITSTRQEIEEQ 392 (1054)
Q Consensus 319 ~~a~~l~~--~~~iP~V~t~H~l~~~~~---~~l~~~g~~~~~~i~-~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~ 392 (1054)
+++.++.. ..++|+|+|+|++..+.. ..+...|. .+.... ....+...+...+.++..||.|+|+|+..++++
T Consensus 146 l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ei 224 (485)
T PRK14099 146 LAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGL-PPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALEI 224 (485)
T ss_pred HHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCC-ChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHHH
Confidence 98887753 357899999999854321 11111111 111100 000111112234567899999999999988887
Q ss_pred HhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCC-chhHHHhhhcC
Q 001557 393 WRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDP-PIWSEIMHFFS 471 (1054)
Q Consensus 393 ~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 471 (1054)
...+.+. .++..|+. ...++.+||||||.+.|.|.....-. ..+........+ .....++++..
T Consensus 225 ~~~~~g~--gl~~~l~~-----------~~~ki~vI~NGID~~~f~p~~~~~~~--~~~~~~~~~~k~~~k~~l~~~~gl 289 (485)
T PRK14099 225 QGPEAGM--GLDGLLRQ-----------RADRLSGILNGIDTAVWNPATDELIA--ATYDVETLAARAANKAALQARFGL 289 (485)
T ss_pred hcccCCc--ChHHHHHh-----------hCCCeEEEecCCchhhccccccchhh--hcCChhHHHhHHHhHHHHHHHcCC
Confidence 5443221 11112222 12389999999999999875421100 000000000000 01112233443
Q ss_pred C--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCE-Ee
Q 001557 472 N--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQV-AY 548 (1054)
Q Consensus 472 ~--~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V-~~ 548 (1054)
+ ++.++|+++||+.++||++.+++|+..+.+ ....+ +|+|+++. ++...+.+++.+++ +++ .|
T Consensus 290 ~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~l-vivG~G~~---------~~~~~l~~l~~~~~--~~v~~~ 355 (485)
T PRK14099 290 DPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQL-ALLGSGDA---------ELEARFRAAAQAYP--GQIGVV 355 (485)
T ss_pred CcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEE-EEEecCCH---------HHHHHHHHHHHHCC--CCEEEE
Confidence 3 357899999999999999999999998853 22333 47787752 23456667777664 344 68
Q ss_pred CCCCCCCcHHHHHH-HhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeC---------CceEEeCCC
Q 001557 549 PKHHKQSDVPDIYR-LAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVL---------DNGLLVDPH 618 (1054)
Q Consensus 549 ~g~~~~~dl~~ly~-~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~---------~~Gllv~p~ 618 (1054)
.|+ .++++.+|. .| |+||+||.+||||++++|||+||+|+|++++||+.|+|.++ .+|++|+|.
T Consensus 356 ~G~--~~~l~~~~~a~a----Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~ 429 (485)
T PRK14099 356 IGY--DEALAHLIQAGA----DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPV 429 (485)
T ss_pred eCC--CHHHHHHHHhcC----CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCC
Confidence 887 689999886 47 99999999999999999999999988889999999998775 589999999
Q ss_pred CHHHHHHHHHH---HHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 001557 619 DQQSIADALLK---LVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQR 670 (1054)
Q Consensus 619 d~~~la~aI~~---ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~~ 670 (1054)
|+++++++|.+ +++|++.+++++++++. +.|||+..+++|+++|+++...
T Consensus 430 d~~~La~ai~~a~~l~~d~~~~~~l~~~~~~--~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 430 TADALAAALRKTAALFADPVAWRRLQRNGMT--TDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred CHHHHHHHHHHHHHHhcCHHHHHHHHHHhhh--hcCChHHHHHHHHHHHHHHHhh
Confidence 99999999997 66799999999998873 6899999999999999988653
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=380.91 Aligned_cols=447 Identities=19% Similarity=0.213 Sum_probs=289.5
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCc-cCCcccc--cccc-cc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWT-YAEPSEM--LNRK-NT 241 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~-~~~~~~~--l~~~-~~ 241 (1054)
|||++||.+.++ . ..+||+..++..|+++|+++ | |+|.|+++.+........ ..+.... +..+ ..
T Consensus 1 m~i~~vs~E~~P----~-----~k~GGl~~~v~~L~~aL~~~-G-~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (473)
T TIGR02095 1 MRVLFVAAEMAP----F-----AKTGGLADVVGALPKALAAL-G-HDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRT 69 (473)
T ss_pred CeEEEEEecccc----c-----cCcCcHHHHHHHHHHHHHHc-C-CeEEEEecCCcChhhhhccCeEEEEEEEEeecCce
Confidence 899999997551 1 56899999999999999999 8 999999986542111000 0000000 0000 00
Q ss_pred cccccccCCCCCeEEEEccCCCCCccccc-ccCCC--ChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCch
Q 001557 242 ENLMQGLGESSGAYIIRIPFGPKDKYVQK-ELLWP--HIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAG 318 (1054)
Q Consensus 242 ~~~~~~~~~~~g~~i~rip~g~~~~~l~k-~~l~~--~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~ 318 (1054)
....-.....+|+.++++.... +..+ ..++. +... +.+++ .+.+...+.+.. ...+|||||+|+|.++
T Consensus 70 ~~~~~~~~~~~~v~~~~i~~~~---~~~r~~~~y~~~~~d~----~~r~~-~f~~a~~~~~~~-~~~~~DiiH~hdw~~~ 140 (473)
T TIGR02095 70 LYVKVFEGVVEGVPVYFIDNPS---LFDRPGGIYGDDYPDN----AERFA-FFSRAAAELLSG-LGWQPDVVHAHDWHTA 140 (473)
T ss_pred eEEEEEEEEECCceEEEEECHH---HcCCCCCCCCCCCCCH----HHHHH-HHHHHHHHHHHh-cCCCCCEEEECCcHHH
Confidence 0000001233688888887542 1222 12332 2221 11111 122222222221 1256999999999999
Q ss_pred HHHHHHHccCC---CCEEEEeCCCccchH--HHHHHhCCCChhhhh-hHhHHHHHHHHHHhhhccCCEEEecCHHHHHHH
Q 001557 319 DAAALLSGALN---VPMVFTGHSLGRDKL--EQLLKQGRLSRDEIN-TTYKIMRRIEAEELSLDASEIVITSTRQEIEEQ 392 (1054)
Q Consensus 319 ~~a~~l~~~~~---iP~V~t~H~l~~~~~--~~l~~~g~~~~~~i~-~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~ 392 (1054)
.++.+++...+ +|+|+|+|++..+.. ...+....+...... ..+.+..++..++.++..||.|+++|+.+++++
T Consensus 141 ~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei 220 (473)
T TIGR02095 141 LVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREI 220 (473)
T ss_pred HHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHh
Confidence 99998887766 999999999864321 011111011110000 000111123445678999999999999888876
Q ss_pred HhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCC-CCCchhHHHhhhcC
Q 001557 393 WRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPAS-PDPPIWSEIMHFFS 471 (1054)
Q Consensus 393 ~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 471 (1054)
.....+. .++..++. ...++.+||||||.+.|.|.....-. ..+...... ........++++..
T Consensus 221 ~~~~~~~--~l~~~l~~-----------~~~ki~~I~NGid~~~~~p~~~~~~~--~~~~~~~~~~k~~~k~~l~~~~gl 285 (473)
T TIGR02095 221 LTPEFGY--GLDGVLKA-----------RSGKLRGILNGIDTEVWNPATDPYLK--ANYSADDLAGKAENKEALQEELGL 285 (473)
T ss_pred cCCcCCc--cchhHHHh-----------cCCCeEEEeCCCCccccCCCCCcccc--cCcCccchhhhhhhHHHHHHHcCC
Confidence 5432111 11111111 12389999999999999875321100 000000000 00011122333443
Q ss_pred CC--CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeC
Q 001557 472 NP--RKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYP 549 (1054)
Q Consensus 472 ~~--~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~ 549 (1054)
+. +.++|+++||+.+.||++.+++|+..+.+ ....+ +|+|+++. .+...+.+++.+++ .++.+.
T Consensus 286 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l-vi~G~g~~---------~~~~~l~~~~~~~~--~~v~~~ 351 (473)
T TIGR02095 286 PVDDDVPLFGVISRLTQQKGVDLLLAALPELLE--LGGQL-VVLGTGDP---------ELEEALRELAERYP--GNVRVI 351 (473)
T ss_pred CccCCCCEEEEEecCccccChHHHHHHHHHHHH--cCcEE-EEECCCCH---------HHHHHHHHHHHHCC--CcEEEE
Confidence 33 78999999999999999999999999863 22233 47787751 23455666766654 568787
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeC------CceEEeCCCCHHHH
Q 001557 550 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVL------DNGLLVDPHDQQSI 623 (1054)
Q Consensus 550 g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~------~~Gllv~p~d~~~l 623 (1054)
+.++.+++..+|+.| |++|+||..||||++++|||+||+|||+++.||..|+|.++ .+|++++|.|++++
T Consensus 352 ~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~l 427 (473)
T TIGR02095 352 IGYDEALAHLIYAGA----DFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGAL 427 (473)
T ss_pred EcCCHHHHHHHHHhC----CEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHH
Confidence 777778889999999 99999999999999999999999999999999999999987 89999999999999
Q ss_pred HHHHHHHHh----CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 001557 624 ADALLKLVS----DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 624 a~aI~~ll~----d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~ 667 (1054)
+++|.+++. +++.++++++++++ +.|||+.++++|+++|+++
T Consensus 428 a~~i~~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 428 LAALSRALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHHHHHHhC
Confidence 999999998 89999999888763 5899999999999999864
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=377.71 Aligned_cols=451 Identities=15% Similarity=0.161 Sum_probs=291.2
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCC-CccCCc--ccccc--ccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD-WTYAEP--SEMLN--RKN 240 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~-~~~~~~--~~~l~--~~~ 240 (1054)
|||++||.... |+ ..|||....+..|+++|+++ | |+|.|+++.+..-... +..... ...+. .+.
T Consensus 6 ~~il~v~~E~~----p~-----~k~Ggl~dv~~~Lp~al~~~-g-~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (489)
T PRK14098 6 FKVLYVSGEVS----PF-----VRVSALADFMASFPQALEEE-G-FEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKE 74 (489)
T ss_pred cEEEEEeecch----hh-----cccchHHHHHHHHHHHHHHC-C-CeEEEEcCCCCchhhhhhccccceEEEEEEEeecC
Confidence 99999998766 34 89999999999999999999 8 9999999865332100 000000 00010 000
Q ss_pred cccccc---ccCCCCCeEEEEccCCCCCcccccccCCCCh---HHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcC
Q 001557 241 TENLMQ---GLGESSGAYIIRIPFGPKDKYVQKELLWPHI---PEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHY 314 (1054)
Q Consensus 241 ~~~~~~---~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l---~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~ 314 (1054)
...... ......++.++.+... .|..+..++..- ..+.|.+.++.. +.++..+.+.. ...+|||||+|+
T Consensus 75 ~~~~~~~~~~~~~~~~v~~~~~~~~---~~f~r~~~y~~~~~g~~~~d~~~rf~~-f~~a~l~~~~~-~~~~pDiiH~hd 149 (489)
T PRK14098 75 KTDLLHVKVTALPSSKIQTYFLYNE---KYFKRNGLFTDMSLGGDLKGSAEKVIF-FNVGVLETLQR-LGWKPDIIHCHD 149 (489)
T ss_pred eeEEEEEEEecccCCCceEEEEeCH---HHcCCCCcCCCCccCCCCCcHHHHHHH-HHHHHHHHHHh-cCCCCCEEEecC
Confidence 000000 0011124555554322 233333333210 112344444433 22222232221 125799999999
Q ss_pred CCchHHHHHHHccC-------CCCEEEEeCCCccchHHH--HHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecC
Q 001557 315 ADAGDAAALLSGAL-------NVPMVFTGHSLGRDKLEQ--LLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITST 385 (1054)
Q Consensus 315 ~~a~~~a~~l~~~~-------~iP~V~t~H~l~~~~~~~--l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S 385 (1054)
|.+++++.+++... ++|+|+|+|++..+.... .+.. .+..............+...+..+..||.|+|+|
T Consensus 150 w~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~-~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS 228 (489)
T PRK14098 150 WYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQK-LLPEEVCSGLHREGDEVNMLYTGVEHADLLTTTS 228 (489)
T ss_pred cHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHH-hCCHHhhhhhhhcCCcccHHHHHHHhcCcceeeC
Confidence 99999998886543 899999999986432110 0000 0111100000000012334566899999999999
Q ss_pred HHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCC-CCchhH
Q 001557 386 RQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASP-DPPIWS 464 (1054)
Q Consensus 386 ~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 464 (1054)
+.+++++... ..+.-.+...|+.+ ..++.+||||||.+.|.|..... ....+....... ......
T Consensus 229 ~~~a~ei~~~-~~~~~gl~~~l~~~-----------~~kl~~I~NGID~~~~~p~~d~~--~~~~~~~~~~~~k~~~k~~ 294 (489)
T PRK14098 229 PRYAEEIAGD-GEEAFGLDKVLEER-----------KMRLHGILNGIDTRQWNPSTDKL--IKKRYSIERLDGKLENKKA 294 (489)
T ss_pred HHHHHHhCcC-CCCCcChHHHHHhc-----------CCCeeEEeCCccccccCCccccc--ccccCCcchhhhHHHHHHH
Confidence 9998886432 01111223333332 23899999999999998754211 000000000000 000111
Q ss_pred HHhhhcC--CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcC
Q 001557 465 EIMHFFS--NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYD 541 (1054)
Q Consensus 465 ~~~~~~~--~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~ 541 (1054)
.++++.. +++.|+|+++||+.+.||++.+++|+..+.+ . ++.| |+|+++. .+...+.+++.+++
T Consensus 295 l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~--~~~lvivG~G~~---------~~~~~l~~l~~~~~ 361 (489)
T PRK14098 295 LLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--L--DIQLVICGSGDK---------EYEKRFQDFAEEHP 361 (489)
T ss_pred HHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--c--CcEEEEEeCCCH---------HHHHHHHHHHHHCC
Confidence 2223333 2467899999999999999999999999853 2 4444 7788752 23466777777764
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceee----CCceEEeCC
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV----LDNGLLVDP 617 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~----~~~Gllv~p 617 (1054)
++|.|.+.++.+++..+|+.| |+||+||..||||++.+|||+||+|+|+++.||..|++.+ +.+|++|++
T Consensus 362 --~~V~~~g~~~~~~~~~~~a~a----Di~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~ 435 (489)
T PRK14098 362 --EQVSVQTEFTDAFFHLAIAGL----DMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHD 435 (489)
T ss_pred --CCEEEEEecCHHHHHHHHHhC----CEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCC
Confidence 689999999888899999999 9999999999999999999999999999999999998864 679999999
Q ss_pred CCHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 001557 618 HDQQSIADALLKLV---SDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCK 668 (1054)
Q Consensus 618 ~d~~~la~aI~~ll---~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~ 668 (1054)
.|+++++++|.+++ .+++.|+++++++++ +.|||+..+++|+++|+++.
T Consensus 436 ~d~~~la~ai~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~y~~lY~~~~ 487 (489)
T PRK14098 436 YTPEALVAKLGEALALYHDEERWEELVLEAME--RDFSWKNSAEEYAQLYRELL 487 (489)
T ss_pred CCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--CCCChHHHHHHHHHHHHHHh
Confidence 99999999999876 588888888776643 69999999999999999875
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=363.40 Aligned_cols=395 Identities=40% Similarity=0.623 Sum_probs=298.5
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++++.|+++-+ -+..|+.||+++++.+|+++|+++ | |+|+|+|.....+.. .
T Consensus 1 ~~~~~~~~~~~~~----~~~~~~~GG~~~~~~~l~~~L~~~-g-~~V~v~~~~~~~~~~--------------------~ 54 (398)
T cd03800 1 RIALISLHGSPLA----QPGGADTGGQNVYVLELARALARL-G-HEVDIFTRRIDDALP--------------------P 54 (398)
T ss_pred CeEEEeccccccc----cCCCCCCCceeehHHHHHHHHhcc-C-ceEEEEEecCCcccC--------------------C
Confidence 5788888876433 222578899999999999999999 8 999999975321110 0
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHc
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 326 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~ 326 (1054)
.....+++.+++++..+. .+..+..+++++..|...+...+. .. ..+||+||+|++..+.++..+++
T Consensus 55 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~-----~~~~Div~~~~~~~~~~~~~~~~ 121 (398)
T cd03800 55 IVELAPGVRVVRVPAGPA-EYLPKEELWPYLDEFADDLLRFLR-------RE-----GGRPDLIHAHYWDSGLVALLLAR 121 (398)
T ss_pred ccccccceEEEecccccc-cCCChhhcchhHHHHHHHHHHHHH-------hc-----CCCccEEEEecCccchHHHHHHh
Confidence 012235889999887665 344555566666555444433332 11 02699999999888888888888
Q ss_pred cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHH
Q 001557 327 ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406 (1054)
Q Consensus 327 ~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 406 (1054)
..++|+|++.|++........... ..+....+...|..+++.+|.|+++|+...+.+...+...
T Consensus 122 ~~~~~~i~~~h~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~------- 185 (398)
T cd03800 122 RLGIPLVHTFHSLGAVKRRHLGAA---------DTYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAY------- 185 (398)
T ss_pred hcCCceEEEeecccccCCcccccc---------cccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHcccc-------
Confidence 999999999998765432111000 0011122233467789999999999998877765554321
Q ss_pred HHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCC
Q 001557 407 LRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDP 486 (1054)
Q Consensus 407 l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~ 486 (1054)
..++.+||||+|.+.|.+..... ..+..+...+++++|+++||+.+
T Consensus 186 ---------------~~~~~vi~ng~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~i~~~gr~~~ 231 (398)
T cd03800 186 ---------------PRRIRVVPPGVDLERFTPYGRAE-------------------ARRARLLRDPDKPRILAVGRLDP 231 (398)
T ss_pred ---------------ccccEEECCCCCccceecccchh-------------------hHHHhhccCCCCcEEEEEccccc
Confidence 12689999999998886532110 00222333567889999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001557 487 KKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 565 (1054)
Q Consensus 487 ~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa 565 (1054)
.||++.+++|+..+.+.. +++.+ ++|++..... ......+..+++.+++.+++.|+|+++.+++..+|+.|
T Consensus 232 ~k~~~~ll~a~~~l~~~~--~~~~l~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a- 303 (398)
T cd03800 232 RKGIDTLIRAYAELPELR--ERANLVIVGGPRDDIL-----AMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAA- 303 (398)
T ss_pred ccCHHHHHHHHHHHHHhC--CCeEEEEEECCCCcch-----hhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhC-
Confidence 999999999999996543 34444 6676653211 11234577888889998999999999999999999999
Q ss_pred cCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001557 566 KTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGL 645 (1054)
Q Consensus 566 ~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 645 (1054)
|++|+||..|+||++++||||||+|||+++.||..|++.++.+|+++++.|+++++++|.+++++++.+++++++++
T Consensus 304 ---di~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~ 380 (398)
T cd03800 304 ---DVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGL 380 (398)
T ss_pred ---CEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred HHH-hcCCHHHHHHHHH
Q 001557 646 KNI-HQFSWPEHCKSYL 661 (1054)
Q Consensus 646 ~~v-~~fsw~~~a~~yl 661 (1054)
+.+ ++|||+.++++|+
T Consensus 381 ~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 381 RRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHhCCHHHHHHHHh
Confidence 999 7999999999886
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-41 Score=380.73 Aligned_cols=481 Identities=33% Similarity=0.419 Sum_probs=363.8
Q ss_pred hhhhhhhccCCCCCCCCCCccccCCCCC---CCCCCCCCchhhhhhhhhhccCcc-eEEEEEecccccccCCcCCCCCCC
Q 001557 114 ASADMSEDLSEGDKGDVSGELSAHGGST---RGRMPRISSVDTMENWAIQYKEKK-LYIVLISLHGLIRGENMELGRDSD 189 (1054)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-mkIllis~h~~~r~~~~elg~~~~ 189 (1054)
++.|+++++|+++|.+........+... ..++.+......+..|+.+.+.-. +.+++. |++ +|| +||
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s-------~~~-~lg-~~d 71 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLLVSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS-------GQD-VLG-LPD 71 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcccccccccchhheeeccccccCchHHHhHHHHHHHHh-------ccc-ccC-CCC
Confidence 4678899999999988666554433311 122333333336777776664432 333333 568 899 999
Q ss_pred CCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcccc
Q 001557 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 269 (1054)
Q Consensus 190 tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~ 269 (1054)
+||++.|+++.+++|. +|+++.+...|++...+.....+..|.++. .+.+......+++++++|++....+.
T Consensus 72 ~G~qV~~l~~h~~al~-~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~------~~~~~~~~~~~~~il~~~~~~~~k~~- 143 (495)
T KOG0853|consen 72 TGGQVVYLTSHEDALE-MPLLLRCFAETLDGTPPILVVGDWLPRAMG------QFLEQVAGCAYLRILRIPFGILFKWA- 143 (495)
T ss_pred CCceEEEEehhhhhhc-chHHHHHHHHHhcCCCceEEEEeecCcccc------hhhhhhhccceeEEEEeccchhhhhh-
Confidence 9999999999999997 666666666666554444434444444432 12244555679999999998876555
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHH
Q 001557 270 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLK 349 (1054)
Q Consensus 270 k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~ 349 (1054)
..+||++..|+.... + |.+++. . ||++|.++|+.++...++++++|++.+++.|.++..+.+....
T Consensus 144 -~~~d~~i~d~~~~~~-~-------l~~~~~----~-p~~~~~i~~~~h~~~~lla~r~g~~~~l~~~~l~~~e~e~~~~ 209 (495)
T KOG0853|consen 144 -EKVDPIIEDFVSACV-P-------LLKQLS----G-PDVIIKIYFYCHFPDSLLAKRLGVLKVLYRHALDKIEEETTGL 209 (495)
T ss_pred -hhhceeecchHHHHH-H-------HHHHhc----C-CcccceeEEeccchHHHhccccCccceeehhhhhhhhhhhhhc
Confidence 778999998874332 2 222222 2 9999999999999999999999999999999999988877655
Q ss_pred hCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeC
Q 001557 350 QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 429 (1054)
Q Consensus 350 ~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIP 429 (1054)
+++ .+...|.+.+++..+...+..+| ++++.++++.+|..|+.++..++..++.|..+||++.+++++++..|+
T Consensus 210 ~~~----~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~ 283 (495)
T KOG0853|consen 210 AWK----ILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFE 283 (495)
T ss_pred cce----EecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecC
Confidence 443 36678889999999999999999 888899999999999999888888888888888888887777777777
Q ss_pred CCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc---CC
Q 001557 430 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLR---EL 506 (1054)
Q Consensus 430 nGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~---~~ 506 (1054)
+|.|...+. +||..+...- +.
T Consensus 284 pgkd~~l~l--------------------------------------------------------~a~~~~~~~i~~~~~ 307 (495)
T KOG0853|consen 284 PGKDQDLAL--------------------------------------------------------PAFTLLHDSIPEPSI 307 (495)
T ss_pred CCCCceeeh--------------------------------------------------------hhHHhhhcccCCCCC
Confidence 777765543 2444443222 22
Q ss_pred CcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCC-CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHH
Q 001557 507 ANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY-GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTL 584 (1054)
Q Consensus 507 ~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~-~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l 584 (1054)
+...+ ++|+. .+++..+++.+++.++..+++++++. ..|.|..++++.+. |+.++.++.+++.|+. |.||+|.
T Consensus 308 ~~~hl~~~g~~-G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~---yrl~adt~~v~~qPa~-E~FGiv~ 382 (495)
T KOG0853|consen 308 SSEHLVVAGSR-GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAK---YRLAADTKGVLYQPAN-EHFGIVP 382 (495)
T ss_pred CceEEEEecCC-CccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHH---HHHHHhcceEEecCCC-CCcccee
Confidence 44555 44432 27788889999999999999999996 45667688665544 7777788899999988 9999999
Q ss_pred HHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHH---HHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHH
Q 001557 585 IEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ---SIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSY 660 (1054)
Q Consensus 585 ~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~---~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~y 660 (1054)
+||||||+|||||++||+.|+|.++.+|++++| +.+ .||++|.++.+||+.|.+|+++|++++ +.|+|. .|
T Consensus 383 IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs~~----~~ 457 (495)
T KOG0853|consen 383 IEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLRRDPELWARMGKNGLKRVKEMFSWQ----HY 457 (495)
T ss_pred HHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhHH----HH
Confidence 999999999999999999999999999999999 666 599999999999999999999999999 579995 55
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCccccccccccccccc
Q 001557 661 LSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSL 707 (1054)
Q Consensus 661 l~~l~~~~~~~~~~~~~~~~~~~s~~~~~~~~lr~~~~~~~~~~~~~ 707 (1054)
.+.+..+....++|+... ..++++++.+++++++++.
T Consensus 458 ~~ri~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 494 (495)
T KOG0853|consen 458 SERIASVLGKYLQWEKVS----------SLDSLEDRRYISLFYALSF 494 (495)
T ss_pred HHHHHHHhHhcCCccccc----------ccccccccccHHHHHHhhc
Confidence 555555555666666543 3778999999997776664
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=358.63 Aligned_cols=398 Identities=15% Similarity=0.143 Sum_probs=284.9
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCC--ccCCcccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW--TYAEPSEMLNRKNTEN 243 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~--~~~~~~~~l~~~~~~~ 243 (1054)
|||+++|.+++ |+.||.+.++.+|+++|.+. | |+|+|+|+....|.... .+....
T Consensus 1 mkIlii~~~~~-----------P~~~g~~~~~~~l~~~L~~~-G-~~V~vit~~~~~~~~~~~~~~~~~~---------- 57 (412)
T PRK10307 1 MKILVYGINYA-----------PELTGIGKYTGEMAEWLAAR-G-HEVRVITAPPYYPQWRVGEGYSAWR---------- 57 (412)
T ss_pred CeEEEEecCCC-----------CCccchhhhHHHHHHHHHHC-C-CeEEEEecCCCCCCCCCCccccccc----------
Confidence 89999997544 77899999999999999999 8 99999997532222110 011000
Q ss_pred cccccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCC--chHHH
Q 001557 244 LMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD--AGDAA 321 (1054)
Q Consensus 244 ~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~--a~~~a 321 (1054)
......+|+.++|+|....... . .+.... ....+.....+.+...+ . .+||+||+|.+. .+..+
T Consensus 58 --~~~~~~~~i~v~r~~~~~~~~~----~---~~~~~~-~~~~~~~~~~~~~~~~~---~-~~~Div~~~~p~~~~~~~~ 123 (412)
T PRK10307 58 --YRRESEGGVTVWRCPLYVPKQP----S---GLKRLL-HLGSFALSSFFPLLAQR---R-WRPDRVIGVVPTLFCAPGA 123 (412)
T ss_pred --ceeeecCCeEEEEccccCCCCc----c---HHHHHH-HHHHHHHHHHHHHhhcc---C-CCCCEEEEeCCcHHHHHHH
Confidence 0011246899999986432100 0 011111 11112222222222211 1 469999999753 34566
Q ss_pred HHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCCh
Q 001557 322 ALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401 (1054)
Q Consensus 322 ~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~ 401 (1054)
..+++..++|+|+++|+++.+... ..|..... ...++... .|+++++.+|.|+++|+...+.+... +..
T Consensus 124 ~~~~~~~~~~~v~~~~d~~~~~~~---~~~~~~~~---~~~~~~~~--~~~~~~~~ad~ii~~S~~~~~~~~~~--~~~- 192 (412)
T PRK10307 124 RLLARLSGARTWLHIQDYEVDAAF---GLGLLKGG---KVARLATA--FERSLLRRFDNVSTISRSMMNKAREK--GVA- 192 (412)
T ss_pred HHHHHhhCCCEEEEeccCCHHHHH---HhCCccCc---HHHHHHHH--HHHHHHhhCCEEEecCHHHHHHHHHc--CCC-
Confidence 777888899999999998764422 22222111 11122222 37778999999999999887765332 111
Q ss_pred HHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEE
Q 001557 402 VLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILAL 481 (1054)
Q Consensus 402 ~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 481 (1054)
..++.+||||+|.+.|.+.... ........+..+++.++|+|+
T Consensus 193 --------------------~~~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~i~~~ 235 (412)
T PRK10307 193 --------------------AEKVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLPDGKKIVLYS 235 (412)
T ss_pred --------------------cccEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCCCCCEEEEEc
Confidence 1289999999999888753210 011122334445667899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHH
Q 001557 482 ARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDI 560 (1054)
Q Consensus 482 gRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~l 560 (1054)
||+.+.||++.+++|+..+.+ .+++.| |+|+++. .+.+.+++.++++. +|.|+|+++.++++.+
T Consensus 236 G~l~~~kg~~~li~a~~~l~~---~~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 236 GNIGEKQGLELVIDAARRLRD---RPDLIFVICGQGGG-----------KARLEKMAQCRGLP-NVHFLPLQPYDRLPAL 300 (412)
T ss_pred CccccccCHHHHHHHHHHhcc---CCCeEEEEECCChh-----------HHHHHHHHHHcCCC-ceEEeCCCCHHHHHHH
Confidence 999999999999999998742 345554 7888764 35577788888886 7999999999999999
Q ss_pred HHHhhcCCcEEEecCCCCC----CcHHHHHHHHcCCCEEEccccC--cccceeeCCceEEeCCCCHHHHHHHHHHHHhCH
Q 001557 561 YRLAAKTKGVFINPAFIEP----FGLTLIEAAAYGLPIVATKNGG--PVDIHRVLDNGLLVDPHDQQSIADALLKLVSDK 634 (1054)
Q Consensus 561 y~~Aa~~~dv~v~ps~~Eg----fgl~l~EAmA~G~PVIat~~Gg--~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~ 634 (1054)
|+.| |++|+|+..|+ +|.+++||||||+|||+|+.|| ..+++. .+|++++|.|+++++++|.++++|+
T Consensus 301 ~~~a----Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~~ 374 (412)
T PRK10307 301 LKMA----DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQA 374 (412)
T ss_pred HHhc----CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhCH
Confidence 9999 99999999998 5777899999999999999876 357776 6899999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhhh
Q 001557 635 QLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 635 ~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~~~ 669 (1054)
+++++|++++++.+ ++|||+.++++|++.|+++..
T Consensus 375 ~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~ 410 (412)
T PRK10307 375 LLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVA 410 (412)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 99999999999999 699999999999999998764
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=355.86 Aligned_cols=366 Identities=21% Similarity=0.230 Sum_probs=269.3
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++++.... |..||.++++.+|+++|+++ | |+|.|+|+....+ .+.
T Consensus 1 kI~~v~~~~~-----------p~~GG~e~~~~~la~~L~~~-G-~~V~v~~~~~~~~-----~~~--------------- 47 (398)
T cd03796 1 RICMVSDFFY-----------PNLGGVETHIYQLSQCLIKR-G-HKVVVITHAYGNR-----VGI--------------- 47 (398)
T ss_pred CeeEEeeccc-----------cccccHHHHHHHHHHHHHHc-C-CeeEEEeccCCcC-----CCc---------------
Confidence 6899986433 67899999999999999999 8 9999999752100 000
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCch--HHHHHH
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAG--DAAALL 324 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~--~~a~~l 324 (1054)
.....|+.++++|..+.. +.........+ +..+ .+.+.+ .+|||||+|..... ..+..+
T Consensus 48 -~~~~~~i~v~~~p~~~~~----~~~~~~~~~~~----~~~l---~~~~~~-------~~~DiIh~~~~~~~~~~~~~~~ 108 (398)
T cd03796 48 -RYLTNGLKVYYLPFVVFY----NQSTLPTFFGT----FPLL---RNILIR-------ERITIVHGHQAFSALAHEALLH 108 (398)
T ss_pred -ccccCceeEEEecceecc----CCccccchhhh----HHHH---HHHHHh-------cCCCEEEECCCCchHHHHHHHH
Confidence 011347888888864321 11111111111 1111 122211 56999999986433 346666
Q ss_pred HccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHH
Q 001557 325 SGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1054)
Q Consensus 325 ~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~ 404 (1054)
++..++|+|+|.|+++..... . . ....+ .++..++.+|.++++|+...+.+...+ ...
T Consensus 109 ~~~~~~~~v~t~h~~~~~~~~--------~----~---~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~-~~~---- 166 (398)
T cd03796 109 ARTMGLKTVFTDHSLFGFADA--------S----S---IHTNK--LLRFSLADVDHVICVSHTSKENTVLRA-SLD---- 166 (398)
T ss_pred hhhcCCcEEEEecccccccch--------h----h---HHhhH--HHHHhhccCCEEEEecHhHhhHHHHHh-CCC----
Confidence 788899999999986431100 0 0 00111 134468899999999997665432221 111
Q ss_pred HHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCC
Q 001557 405 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 484 (1054)
Q Consensus 405 ~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl 484 (1054)
..++.+||||+|.+.|.+.... .++++++|+++||+
T Consensus 167 -----------------~~k~~vi~ngvd~~~f~~~~~~---------------------------~~~~~~~i~~~grl 202 (398)
T cd03796 167 -----------------PERVSVIPNAVDSSDFTPDPSK---------------------------RDNDKITIVVISRL 202 (398)
T ss_pred -----------------hhhEEEEcCccCHHHcCCCccc---------------------------CCCCceEEEEEecc
Confidence 1289999999999888653210 13567899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 001557 485 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 563 (1054)
Q Consensus 485 d~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~ 563 (1054)
.+.||++.+++|+..+.+. .+++.| ++|+++. ...+.++++++++.++|.|+|+++.+++..+|+.
T Consensus 203 ~~~Kg~~~li~a~~~l~~~--~~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ 269 (398)
T cd03796 203 VYRKGIDLLVGIIPEICKK--HPNVRFIIGGDGPK-----------RILLEEMREKYNLQDRVELLGAVPHERVRDVLVQ 269 (398)
T ss_pred chhcCHHHHHHHHHHHHhh--CCCEEEEEEeCCch-----------HHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHh
Confidence 9999999999999988643 345665 7787763 3557788899999999999999999999999999
Q ss_pred hhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001557 564 AAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQN 643 (1054)
Q Consensus 564 Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1054)
| |++|+||..|+||++++||||||+|||+++.||..|++.++ .+++++ .|+++++++|.++++++.+...+.++
T Consensus 270 a----d~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~-~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~ 343 (398)
T cd03796 270 G----HIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD-MILLAE-PDVESIVRKLEEAISILRTGKHDPWS 343 (398)
T ss_pred C----CEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCC-ceeecC-CCHHHHHHHHHHHHhChhhhhhHHHH
Confidence 9 99999999999999999999999999999999999999764 455554 48999999999999987777677888
Q ss_pred HHHHH-hcCCHHHHHHHHHHHHHHhhh
Q 001557 644 GLKNI-HQFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 644 ~~~~v-~~fsw~~~a~~yl~~l~~~~~ 669 (1054)
+++.+ ++|||+..+++|+++|+.+..
T Consensus 344 ~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 344 FHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 88888 799999999999999998865
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=361.57 Aligned_cols=376 Identities=20% Similarity=0.237 Sum_probs=270.4
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccc
Q 001557 163 EKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTE 242 (1054)
Q Consensus 163 ~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~ 242 (1054)
.++|||++++ +.. + .+..||...++.+|+++|.++ | |+|+|+|.....+.
T Consensus 56 ~~~mrI~~~~-~~~----~-----~~~~gG~~~~~~~l~~~L~~~-G-~eV~vlt~~~~~~~------------------ 105 (465)
T PLN02871 56 SRPRRIALFV-EPS----P-----FSYVSGYKNRFQNFIRYLREM-G-DEVLVVTTDEGVPQ------------------ 105 (465)
T ss_pred CCCceEEEEE-CCc----C-----CcccccHHHHHHHHHHHHHHC-C-CeEEEEecCCCCCc------------------
Confidence 6789999997 322 1 256799999999999999999 8 99999997521110
Q ss_pred ccccccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCC-chHHH
Q 001557 243 NLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD-AGDAA 321 (1054)
Q Consensus 243 ~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~-a~~~a 321 (1054)
...|+.+++++..+...+ .. ..+.+ .+... +.+.+.+ .+|||||+|... ....+
T Consensus 106 -------~~~g~~v~~~~~~~~~~~-~~-~~~~~--~~~~~-------l~~~i~~-------~kpDiIh~~~~~~~~~~~ 160 (465)
T PLN02871 106 -------EFHGAKVIGSWSFPCPFY-QK-VPLSL--ALSPR-------IISEVAR-------FKPDLIHASSPGIMVFGA 160 (465)
T ss_pred -------cccCceeeccCCcCCccC-CC-ceeec--cCCHH-------HHHHHHh-------CCCCEEEECCCchhHHHH
Confidence 012555554433221111 10 00000 00011 1222222 569999999863 34455
Q ss_pred HHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCCh
Q 001557 322 ALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401 (1054)
Q Consensus 322 ~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~ 401 (1054)
..+++..++|+|++.|+........+ . .....+... ..++..++.+|.|+++|+...+.+...+..
T Consensus 161 ~~~ak~~~ip~V~~~h~~~~~~~~~~------~---~~~~~~~~~--~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~--- 226 (465)
T PLN02871 161 LFYAKLLCVPLVMSYHTHVPVYIPRY------T---FSWLVKPMW--DIIRFLHRAADLTLVTSPALGKELEAAGVT--- 226 (465)
T ss_pred HHHHHHhCCCEEEEEecCchhhhhcc------c---chhhHHHHH--HHHHHHHhhCCEEEECCHHHHHHHHHcCCC---
Confidence 56677889999999998654332111 0 000111111 124556889999999999887766543211
Q ss_pred HHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhc-CCCCCcEEEE
Q 001557 402 VLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFF-SNPRKPMILA 480 (1054)
Q Consensus 402 ~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Il~ 480 (1054)
+..++.+||||+|.+.|.|..... ....++. ..+++++|++
T Consensus 227 -------------------~~~kv~vi~nGvd~~~f~p~~~~~-------------------~~~~~~~~~~~~~~~i~~ 268 (465)
T PLN02871 227 -------------------AANRIRVWNKGVDSESFHPRFRSE-------------------EMRARLSGGEPEKPLIVY 268 (465)
T ss_pred -------------------CcCeEEEeCCccCccccCCccccH-------------------HHHHHhcCCCCCCeEEEE
Confidence 123899999999999887532110 1111221 2356789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHH
Q 001557 481 LARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPD 559 (1054)
Q Consensus 481 vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 559 (1054)
+||+.+.||++.+++++..+ +++.| |+|+++. ...+.+++.. .+|.|+|+++.++++.
T Consensus 269 vGrl~~~K~~~~li~a~~~~------~~~~l~ivG~G~~-----------~~~l~~~~~~----~~V~f~G~v~~~ev~~ 327 (465)
T PLN02871 269 VGRLGAEKNLDFLKRVMERL------PGARLAFVGDGPY-----------REELEKMFAG----TPTVFTGMLQGDELSQ 327 (465)
T ss_pred eCCCchhhhHHHHHHHHHhC------CCcEEEEEeCChH-----------HHHHHHHhcc----CCeEEeccCCHHHHHH
Confidence 99999999999999999876 24444 7888764 2344445443 3699999999999999
Q ss_pred HHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceee---CCceEEeCCCCHHHHHHHHHHHHhCHHH
Q 001557 560 IYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV---LDNGLLVDPHDQQSIADALLKLVSDKQL 636 (1054)
Q Consensus 560 ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~---~~~Gllv~p~d~~~la~aI~~ll~d~~~ 636 (1054)
+|+.| |++|+||..|+||++++||||||+|||+++.||..|++.+ +.+|++++|.|+++++++|.+++++++.
T Consensus 328 ~~~~a----Dv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~ 403 (465)
T PLN02871 328 AYASG----DVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPEL 403 (465)
T ss_pred HHHHC----CEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHH
Confidence 99999 9999999999999999999999999999999999999998 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHH-HHHHhhhc
Q 001557 637 WERCRQNGLKNIHQFSWPEHCKSYLS-RISSCKQR 670 (1054)
Q Consensus 637 ~~~~~~~~~~~v~~fsw~~~a~~yl~-~l~~~~~~ 670 (1054)
++++++++++.+++|||+..++++++ .|..+...
T Consensus 404 ~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 404 RERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999989999999999998 68877654
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=351.41 Aligned_cols=377 Identities=21% Similarity=0.298 Sum_probs=273.6
Q ss_pred eEEEEEecccccccCCcCCCCCCC-CCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSD-TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENL 244 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~-tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~ 244 (1054)
|||++|+.+ + +|+ .||.+.++.+|+++|.+. ++|+|++.... .
T Consensus 1 mkI~~i~~~-~----------~p~~~GG~~~~v~~l~~~l~~~---~~v~v~~~~~~--~-------------------- 44 (388)
T TIGR02149 1 MKVTVLTRE-Y----------PPNVYGGAGVHVEELTRELARL---MDVDVRCFGDQ--R-------------------- 44 (388)
T ss_pred CeeEEEecc-c----------CccccccHhHHHHHHHHHHHHh---cCeeEEcCCCc--h--------------------
Confidence 899999864 3 255 499999999999999886 57888875310 0
Q ss_pred ccccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHH
Q 001557 245 MQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALL 324 (1054)
Q Consensus 245 ~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l 324 (1054)
....++.+.+++.... . ......+..+ . ..+. .. ....+|||||+|.+.++..+..+
T Consensus 45 ----~~~~~~~~~~~~~~~~---~--~~~~~~~~~~----~---~~~~-~~------~~~~~~divh~~~~~~~~~~~~~ 101 (388)
T TIGR02149 45 ----FDSEGLTVKGYRPWSE---L--KEANKALGTF----S---VDLA-MA------NDPVDADVVHSHTWYTFLAGHLA 101 (388)
T ss_pred ----hcCCCeEEEEecChhh---c--cchhhhhhhh----h---HHHH-Hh------hCCCCCCeEeecchhhhhHHHHH
Confidence 0124777777654211 0 0000111111 0 0000 00 01135999999998777777777
Q ss_pred HccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHH
Q 001557 325 SGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1054)
Q Consensus 325 ~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~ 404 (1054)
++..++|+|+|.|++.+...... ......+.+..+ .++.+++.+|.|+++|+...+.+.+.|.+..+
T Consensus 102 ~~~~~~p~v~~~h~~~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~--- 168 (388)
T TIGR02149 102 KKLYDKPLVVTAHSLEPLRPWKE--------EQLGGGYKLSSW--AEKTAIEAADRVIAVSGGMREDILKYYPDLDP--- 168 (388)
T ss_pred HHhcCCCEEEEeecccccccccc--------cccccchhHHHH--HHHHHHhhCCEEEEccHHHHHHHHHHcCCCCc---
Confidence 77789999999999754321000 000111222333 26678999999999999887777665543322
Q ss_pred HHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCC
Q 001557 405 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 484 (1054)
Q Consensus 405 ~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl 484 (1054)
.++.+||||+|...|.+.. ....+.++..++++++|+++||+
T Consensus 169 ------------------~~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~i~~~Grl 210 (388)
T TIGR02149 169 ------------------EKVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGIDRSRPYILFVGRI 210 (388)
T ss_pred ------------------ceEEEecCCCChhhcCCCc--------------------hHHHHHHhCCCCCceEEEEEccc
Confidence 2899999999998876421 11123344445678899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCC-CCEEe-CCCCCCCcHHHHHH
Q 001557 485 DPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY-GQVAY-PKHHKQSDVPDIYR 562 (1054)
Q Consensus 485 d~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~-~~V~~-~g~~~~~dl~~ly~ 562 (1054)
.+.||++.+++|+.++. +...+ +++|++++. .++...+.+.+..++.. .+|.+ .+.++.+++..+|+
T Consensus 211 ~~~Kg~~~li~a~~~l~---~~~~l-~i~g~g~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 211 TRQKGVPHLLDAVHYIP---KDVQV-VLCAGAPDT-------PEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLS 279 (388)
T ss_pred ccccCHHHHHHHHHHHh---hcCcE-EEEeCCCCc-------HHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHH
Confidence 99999999999999884 23344 345555432 22345666777776652 33554 57889999999999
Q ss_pred HhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCH------HHHHHHHHHHHhCHHH
Q 001557 563 LAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ------QSIADALLKLVSDKQL 636 (1054)
Q Consensus 563 ~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~------~~la~aI~~ll~d~~~ 636 (1054)
.| |++|+||..|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|+ ++++++|.+++++++.
T Consensus 280 ~a----Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~ 355 (388)
T TIGR02149 280 NA----EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPEL 355 (388)
T ss_pred hC----CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHH
Confidence 99 9999999999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 637 WERCRQNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 637 ~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
++++++++++.+ ++|||+.++++|.++|+++
T Consensus 356 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 356 AKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999999999998 7999999999999999875
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=351.41 Aligned_cols=444 Identities=19% Similarity=0.178 Sum_probs=280.5
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcc-cc--cccc-ccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPS-EM--LNRK-NTE 242 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~-~~--l~~~-~~~ 242 (1054)
||++||.... -...+||...++..|+++|+++ | |+|.|+++.+..-...+...... .. .... ...
T Consensus 1 ~Il~v~~E~~---------p~~k~GGl~~~~~~L~~aL~~~-G-~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (476)
T cd03791 1 KVLFVASEVA---------PFAKTGGLGDVVGALPKALAKL-G-HDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPE 69 (476)
T ss_pred CEEEEEcccc---------ccccCCcHHHHHHHHHHHHHHC-C-CeEEEEecCCcchhhHhccCeEEEEEEeeccCCcee
Confidence 5999998544 1357999999999999999999 8 99999997653211100000000 00 0000 000
Q ss_pred ccccccCCCCCeEEEEccCCCCCcccccc-----cCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCc
Q 001557 243 NLMQGLGESSGAYIIRIPFGPKDKYVQKE-----LLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA 317 (1054)
Q Consensus 243 ~~~~~~~~~~g~~i~rip~g~~~~~l~k~-----~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a 317 (1054)
...-.....+|+.++++..... ..+. ...++.... ..+..+.......+... ..+|||||+|+|.+
T Consensus 70 ~~~~~~~~~~gv~~~~l~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~f~~~~~~~l~~~-----~~~pDviH~hd~~t 140 (476)
T cd03791 70 YVGVFELPVDGVPVYFLDNPDY---FDRPGLYDDSGYDYEDNA-ERFALFSRAALELLRRL-----GWKPDIIHCHDWHT 140 (476)
T ss_pred EEEEEEEEeCCceEEEEcChHH---cCCCCCCCccCCCCccHH-HHHHHHHHHHHHHHHhc-----CCCCcEEEECchHH
Confidence 0000112236888888865321 1111 112222111 11111111122222221 25699999999999
Q ss_pred hHHHHHHHcc------CCCCEEEEeCCCccchH---HHHHHhCCCC-hhhhhhHhHHHHHHHHHHhhhccCCEEEecCHH
Q 001557 318 GDAAALLSGA------LNVPMVFTGHSLGRDKL---EQLLKQGRLS-RDEINTTYKIMRRIEAEELSLDASEIVITSTRQ 387 (1054)
Q Consensus 318 ~~~a~~l~~~------~~iP~V~t~H~l~~~~~---~~l~~~g~~~-~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~ 387 (1054)
+.++.+++.. .++|+|+|+|++..... ..+...+... .......+.+...+..++.++..||.|+++|+.
T Consensus 141 ~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~ 220 (476)
T cd03791 141 GLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220 (476)
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHh
Confidence 8888887765 48999999999865431 1111111000 000000001112233467789999999999998
Q ss_pred HHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCc-hhHHH
Q 001557 388 EIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPP-IWSEI 466 (1054)
Q Consensus 388 ~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 466 (1054)
..+++...+.+. +++..+.. ...++.+||||||.+.|.|........ .+.......... ....+
T Consensus 221 ~~~~i~~~~~~~--gl~~~~~~-----------~~~ki~~I~NGid~~~~~p~~~~~~~~--~~~~~~~~~~~~~k~~l~ 285 (476)
T cd03791 221 YAREILTPEFGE--GLDGLLRA-----------RAGKLSGILNGIDYDVWNPATDPHLPA--NYSADDLEGKAENKAALQ 285 (476)
T ss_pred HHHHhCCCCCCc--chHHHHHh-----------ccCCeEEEeCCCcCcccCccccchhhh--cCCccccccHHHHHHHHH
Confidence 887764432111 11111111 123899999999999998753211000 000000000001 11122
Q ss_pred hhhcC--CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCC
Q 001557 467 MHFFS--NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 544 (1054)
Q Consensus 467 ~~~~~--~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~ 544 (1054)
.++.. .++.++|+++||+.+.||++.+++|+..+.+. ..++ +++|.++. .+...+.+++.++ .+
T Consensus 286 ~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~l-vi~G~g~~---------~~~~~~~~~~~~~--~~ 351 (476)
T cd03791 286 EELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQL-VILGSGDP---------EYEEALRELAARY--PG 351 (476)
T ss_pred HHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEE-EEEecCCH---------HHHHHHHHHHHhC--CC
Confidence 33333 36889999999999999999999999998642 2222 46787742 2345566666665 45
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCC------ceEEeCCC
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLD------NGLLVDPH 618 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~------~Gllv~p~ 618 (1054)
++.+.+..+.+++..+|+.| |++|+||..||||++++|||+||+|||+++.||..|+|.++. +|++++|.
T Consensus 352 ~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~ 427 (476)
T cd03791 352 RVAVLIGYDEALAHLIYAGA----DFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY 427 (476)
T ss_pred cEEEEEeCCHHHHHHHHHhC----CEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCC
Confidence 67766666667778999999 999999999999999999999999999999999999999887 99999999
Q ss_pred CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001557 619 DQQSIADALLKLVS---DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 619 d~~~la~aI~~ll~---d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
|+++++++|.++++ +++.++++++++++ +.|||+..+++|+++|+
T Consensus 428 ~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 428 NADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLELYR 475 (476)
T ss_pred CHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHh
Confidence 99999999999886 67778777777654 47999999999999986
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=335.63 Aligned_cols=279 Identities=19% Similarity=0.257 Sum_probs=226.3
Q ss_pred CcceEEEEcCCCchHHHHHHHc--cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEE
Q 001557 305 IWPVAIHGHYADAGDAAALLSG--ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVI 382 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~--~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi 382 (1054)
..||+||+|++.++..+..++. .++.|.++|.|+....... . ...+.. ..+..++.+|.|+
T Consensus 117 ~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~-~-----------~~~~~~-----~~~~~~~~ad~vv 179 (406)
T PRK15427 117 FVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSRE-V-----------LNHYTP-----EYQQLFRRGDLML 179 (406)
T ss_pred CCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccch-h-----------hhhhhH-----HHHHHHHhCCEEE
Confidence 5699999999877777777765 4556789999975322110 0 001110 1233578999999
Q ss_pred ecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
++|+...+.+.. + +..+ .++.+||||+|.+.|.+....
T Consensus 180 ~~S~~~~~~l~~-~-g~~~---------------------~ki~vi~nGvd~~~f~~~~~~------------------- 217 (406)
T PRK15427 180 PISDLWAGRLQK-M-GCPP---------------------EKIAVSRMGVDMTRFSPRPVK------------------- 217 (406)
T ss_pred ECCHHHHHHHHH-c-CCCH---------------------HHEEEcCCCCCHHHcCCCccc-------------------
Confidence 999977666533 2 1222 289999999999988643210
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcC
Q 001557 463 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYD 541 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~ 541 (1054)
...+...|+++||+.+.||++.+++|+..+.+ ..+++.+ |+|+++. ...+.+++.+++
T Consensus 218 --------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~--~~~~~~l~ivG~G~~-----------~~~l~~~~~~~~ 276 (406)
T PRK15427 218 --------APATPLEIISVARLTEKKGLHVAIEACRQLKE--QGVAFRYRILGIGPW-----------ERRLRTLIEQYQ 276 (406)
T ss_pred --------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHh--hCCCEEEEEEECchh-----------HHHHHHHHHHcC
Confidence 01344679999999999999999999999864 3345665 7888764 456788999999
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCC------CCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEe
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFI------EPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV 615 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~------Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv 615 (1054)
+.++|.|+|+++++++.++|+.| |+||+||.. ||||++++||||||+|||+|+.||.+|++.++.+|+++
T Consensus 277 l~~~V~~~G~~~~~el~~~l~~a----Dv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv 352 (406)
T PRK15427 277 LEDVVEMPGFKPSHEVKAMLDDA----DVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV 352 (406)
T ss_pred CCCeEEEeCCCCHHHHHHHHHhC----CEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe
Confidence 99999999999999999999999 999999974 99999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 616 DPHDQQSIADALLKLVS-DKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
+|.|+++++++|.++++ |+++++++++++++.+ ++|+|+..++++.++|+++
T Consensus 353 ~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 353 PENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQAL 406 (406)
T ss_pred CCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 99999999999999999 9999999999999999 7999999999999998753
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=330.43 Aligned_cols=367 Identities=22% Similarity=0.230 Sum_probs=265.8
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
-+|++|..+ + ..||+++++.+|+++|.+. | +++.|++.... +.-..
T Consensus 2 ~~il~ii~~-~------------~~GG~e~~~~~l~~~l~~~-~-~~~~v~~~~~~--------~~~~~----------- 47 (374)
T TIGR03088 2 PLIVHVVYR-F------------DVGGLENGLVNLINHLPAD-R-YRHAVVALTEV--------SAFRK----------- 47 (374)
T ss_pred ceEEEEeCC-C------------CCCcHHHHHHHHHhhcccc-c-cceEEEEcCCC--------ChhHH-----------
Confidence 368888753 2 3499999999999999998 7 89988874311 10000
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 325 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~ 325 (1054)
.....|+.+++++..+.. .+ .+ +..+.+.+.+ .+|||||+|... +..+..++
T Consensus 48 --~~~~~~i~~~~~~~~~~~-------~~----~~-------~~~l~~~l~~-------~~~Divh~~~~~-~~~~~~~~ 99 (374)
T TIGR03088 48 --RIQRPDVAFYALHKQPGK-------DV----AV-------YPQLYRLLRQ-------LRPDIVHTRNLA-ALEAQLPA 99 (374)
T ss_pred --HHHhcCceEEEeCCCCCC-------Ch----HH-------HHHHHHHHHH-------hCCCEEEEcchh-HHHHHHHH
Confidence 011237788877643220 00 11 1122222322 469999999753 33344455
Q ss_pred ccCCCCE-EEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHH
Q 001557 326 GALNVPM-VFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1054)
Q Consensus 326 ~~~~iP~-V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~ 404 (1054)
...++|. +++.|+....... + ....+++.+ +...+.+|.++++|+...+.+...+..
T Consensus 100 ~~~~~~~~i~~~h~~~~~~~~-----~------~~~~~~~~~-----~~~~~~~~~~i~vs~~~~~~~~~~~~~------ 157 (374)
T TIGR03088 100 ALAGVPARIHGEHGRDVFDLD-----G------SNWKYRWLR-----RLYRPLIHHYVAVSRDLEDWLRGPVKV------ 157 (374)
T ss_pred HhcCCCeEEEeecCcccccch-----h------hHHHHHHHH-----HHHHhcCCeEEEeCHHHHHHHHHhcCC------
Confidence 5567775 6677754221110 0 011222232 335567899999999877765443321
Q ss_pred HHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCC
Q 001557 405 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 484 (1054)
Q Consensus 405 ~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl 484 (1054)
+..++.+||||+|.+.|.+..... ...........++++|+++||+
T Consensus 158 ----------------~~~~~~vi~ngvd~~~~~~~~~~~------------------~~~~~~~~~~~~~~~i~~vGrl 203 (374)
T TIGR03088 158 ----------------PPAKIHQIYNGVDTERFHPSRGDR------------------SPILPPDFFADESVVVGTVGRL 203 (374)
T ss_pred ----------------ChhhEEEeccCccccccCCCccch------------------hhhhHhhcCCCCCeEEEEEecC
Confidence 123899999999998886532110 0011122234567899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCC--CcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHH
Q 001557 485 DPKKNITTLVKAFGECRPLREL--ANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIY 561 (1054)
Q Consensus 485 d~~Kgi~~ll~A~~~l~~~~~~--~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly 561 (1054)
.+.||++.+++|+..+....+. +++.| ++|+++. ...+.+.+..+++...+.|+|+ .+|+..+|
T Consensus 204 ~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~ 270 (374)
T TIGR03088 204 QAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPA-----------RGACEQMVRAAGLAHLVWLPGE--RDDVPALM 270 (374)
T ss_pred CcccCHHHHHHHHHHHHHhCcccccceEEEEecCCch-----------HHHHHHHHHHcCCcceEEEcCC--cCCHHHHH
Confidence 9999999999999998654432 35665 7788764 3456788888999889999996 67999999
Q ss_pred HHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001557 562 RLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCR 641 (1054)
Q Consensus 562 ~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~ 641 (1054)
+.| |++|+||..||||++++|||+||+|||+|+.||..|++.++.+|+++++.|+++++++|.+++++++.+.+++
T Consensus 271 ~~a----di~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~ 346 (374)
T TIGR03088 271 QAL----DLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHG 346 (374)
T ss_pred Hhc----CEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 642 QNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 642 ~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
+++++.+ ++|||+.++++|.++|.++
T Consensus 347 ~~a~~~~~~~fs~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 347 AAGRARAEQQFSINAMVAAYAGLYDQL 373 (374)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 9999998 7999999999999999875
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=331.42 Aligned_cols=366 Identities=22% Similarity=0.325 Sum_probs=263.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
|||++++. |..||.++++.+|+++|++. | |+|+|+|... +. ...
T Consensus 1 mki~~~~~--------------p~~gG~~~~~~~la~~L~~~-G-~~v~v~~~~~--~~-----~~~------------- 44 (371)
T cd04962 1 MKIGIVCY--------------PTYGGSGVVATELGKALARR-G-HEVHFITSSR--PF-----RLD------------- 44 (371)
T ss_pred CceeEEEE--------------eCCCCccchHHHHHHHHHhc-C-CceEEEecCC--Cc-----chh-------------
Confidence 78999974 45699999999999999999 8 9999998642 10 000
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHH-
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALL- 324 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l- 324 (1054)
...+++.+..++.... +......+. ......+.+.+.+ .+||+||+|++.....+..+
T Consensus 45 ---~~~~~~~~~~~~~~~~----~~~~~~~~~-------~~~~~~l~~~i~~-------~~~divh~~~~~~~~~~~~~~ 103 (371)
T cd04962 45 ---EYSPNIFFHEVEVPQY----PLFQYPPYD-------LALASKIAEVAKR-------YKLDLLHVHYAVPHAVAAYLA 103 (371)
T ss_pred ---hhccCeEEEEeccccc----chhhcchhH-------HHHHHHHHHHHhc-------CCccEEeecccCCccHHHHHH
Confidence 0112444444332111 000000110 1111112222222 56999999986433222222
Q ss_pred ---HccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCCh
Q 001557 325 ---SGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401 (1054)
Q Consensus 325 ---~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~ 401 (1054)
.+..++|+|++.|+...... +. . ..+ ++ .++.+++.+|.|+++|+...+.+.+.|..
T Consensus 104 ~~~~~~~~~~~i~~~h~~~~~~~------~~-~-----~~~---~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~~--- 163 (371)
T cd04962 104 REILGKKDLPVVTTLHGTDITLV------GQ-D-----PSF---QP--ATRFSIEKSDGVTAVSESLRQETYELFDI--- 163 (371)
T ss_pred HHhcCcCCCcEEEEEcCCccccc------cc-c-----ccc---hH--HHHHHHhhCCEEEEcCHHHHHHHHHhcCC---
Confidence 22248999999997633211 00 0 011 11 13456889999999999877765544321
Q ss_pred HHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEE
Q 001557 402 VLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILAL 481 (1054)
Q Consensus 402 ~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 481 (1054)
..++.+||||+|...|.+.... ....++...++.++|+++
T Consensus 164 --------------------~~~i~vi~n~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~il~~ 203 (371)
T cd04962 164 --------------------TKEIEVIPNFVDEDRFRPKPDE--------------------ALKRRLGAPEGEKVLIHI 203 (371)
T ss_pred --------------------cCCEEEecCCcCHhhcCCCchH--------------------HHHHhcCCCCCCeEEEEe
Confidence 1279999999998777542110 112234445678899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHH
Q 001557 482 ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIY 561 (1054)
Q Consensus 482 gRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly 561 (1054)
||+.+.||++.+++|+..+... ....+ +++|.+++ ...+.+++.++++.++|.|+|.. +++..+|
T Consensus 204 g~l~~~K~~~~li~a~~~l~~~-~~~~l-~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~ 268 (371)
T cd04962 204 SNFRPVKRIDDVIRIFAKVRKE-VPARL-LLVGDGPE-----------RSPAERLARELGLQDDVLFLGKQ--DHVEELL 268 (371)
T ss_pred cccccccCHHHHHHHHHHHHhc-CCceE-EEEcCCcC-----------HHHHHHHHHHcCCCceEEEecCc--ccHHHHH
Confidence 9999999999999999988532 22222 47788765 24466778888888899999974 6899999
Q ss_pred HHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001557 562 RLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCR 641 (1054)
Q Consensus 562 ~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~ 641 (1054)
+.| |++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|++++++|+++++++|.+++++++.+.+++
T Consensus 269 ~~~----d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~ 344 (371)
T cd04962 269 SIA----DLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFS 344 (371)
T ss_pred Hhc----CEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 642 QNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 642 ~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
+++++.+ ++|||+.++++|.+.|+++
T Consensus 345 ~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 345 RAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 9999997 7999999999999999753
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=333.46 Aligned_cols=375 Identities=18% Similarity=0.184 Sum_probs=253.0
Q ss_pred HHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcccccccCCCC
Q 001557 197 VVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPH 276 (1054)
Q Consensus 197 v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~ 276 (1054)
..+||++|+++ | |+|+++|.... +. ...|+++++++.++.. .+ ..++|
T Consensus 13 ~~~la~~L~~~-G-~~v~~~~~~~~-~~-------------------------~~~~v~~~~~~~~~~~---~~-~~~~~ 60 (396)
T cd03818 13 FRHLAPALAAQ-G-HEVVFLTEPNA-AP-------------------------PPGGVRVVRYRPPRGP---TS-GTHPY 60 (396)
T ss_pred HHHHHHHHHHC-C-CEEEEEecCCC-CC-------------------------CCCCeeEEEecCCCCC---CC-CCCcc
Confidence 35699999999 8 99999997621 00 0016899998876542 12 56777
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHc-cCCCCEEEEeCCCccchHHHHHHhCCCCh
Q 001557 277 IPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG-ALNVPMVFTGHSLGRDKLEQLLKQGRLSR 355 (1054)
Q Consensus 277 l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~-~~~iP~V~t~H~l~~~~~~~l~~~g~~~~ 355 (1054)
...+...+..... +.+.+.... .+..+|||||+|.... . +..+.. ..++|+|.+.|-+....... .+ +..
T Consensus 61 ~~~~~~~~~~~~~-~~~~~~~~~--~~~~~pdvi~~h~~~~-~-~~~l~~~~~~~~~v~~~~~~~~~~~~~---~~-~~~ 131 (396)
T cd03818 61 LREFEEAVLRGQA-VARALLALR--AKGFRPDVIVAHPGWG-E-TLFLKDVWPDAPLIGYFEFYYRAEGAD---VG-FDP 131 (396)
T ss_pred chhHHHHHHHHHH-HHHHHHHHH--hcCCCCCEEEECCccc-h-hhhHHHhCCCCCEEEEEeeeecCCCCC---CC-CCC
Confidence 7777554443222 222222221 1236799999997432 1 122332 34689998776433221000 00 000
Q ss_pred hhhhh---HhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCC
Q 001557 356 DEINT---TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGI 432 (1054)
Q Consensus 356 ~~i~~---~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGI 432 (1054)
..... ..++..+.......++.+|.||++|+...+.+...+. .++.|||||+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~-------------------------~ki~vI~ngv 186 (396)
T cd03818 132 EFPPSLDDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR-------------------------SRISVIHDGI 186 (396)
T ss_pred CCCCchhHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc-------------------------cceEEeCCCc
Confidence 00000 1111111112446799999999999987665433221 2899999999
Q ss_pred cCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcEEE
Q 001557 433 EFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALAR-PDPKKNITTLVKAFGECRPLRELANLTL 511 (1054)
Q Consensus 433 D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgR-ld~~Kgi~~ll~A~~~l~~~~~~~~l~L 511 (1054)
|.+.|.|...... .........++.++|+++|| +.+.||++.+++|+..+.+.. +++.+
T Consensus 187 d~~~f~~~~~~~~------------------~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~--~~~~l 246 (396)
T cd03818 187 DTDRLRPDPQARL------------------RLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRAR--PDARV 246 (396)
T ss_pred cccccCCCchhhh------------------cccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHC--CCcEE
Confidence 9999876431100 00000112356789999998 999999999999999986433 45554
Q ss_pred -EEecCC-CchhhhhchHHHHHHHHHHHH-HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHH
Q 001557 512 -IMGNRD-DIDEMSGTNAALLLSILKLID-KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA 588 (1054)
Q Consensus 512 -IiG~~~-~~~~~~~~~~~~~~~i~~l~~-~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAm 588 (1054)
|+|++. .+.........+...+.+... +++ .++|.|+|+++.++++.+|+.| |++|+||..|++|++++|||
T Consensus 247 vivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~V~f~G~v~~~~~~~~l~~a----dv~v~~s~~e~~~~~llEAm 321 (396)
T cd03818 247 VIVGGDGVSYGAPPPDGESWKQHMLDELGGRLD-LSRVHFLGRVPYDQYLALLQVS----DVHVYLTYPFVLSWSLLEAM 321 (396)
T ss_pred EEEcCCCcccCCCCCCcccHHHHHHHHhhcccC-cceEEEeCCCCHHHHHHHHHhC----cEEEEcCcccccchHHHHHH
Confidence 666532 111111101112222222222 222 3689999999999999999999 99999999999999999999
Q ss_pred HcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHH
Q 001557 589 AYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLS 662 (1054)
Q Consensus 589 A~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~ 662 (1054)
|||+|||+|+.||..|++.++.+|++++|.|+++++++|.+++++++.+.++++++++.+ ++|||+.++++|++
T Consensus 322 A~G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 322 ACGCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred HCCCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999 57999999999863
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-33 Score=323.07 Aligned_cols=387 Identities=20% Similarity=0.222 Sum_probs=264.5
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
|||+++.+. + ..||.++++.+||++|++. | |+|+|+|.... .. ..+.
T Consensus 1 mkIl~~~~~-~------------~~gG~e~~~~~la~~L~~~-G-~~V~v~~~~~~--~~-~~~~--------------- 47 (392)
T cd03805 1 LRVAFIHPD-L------------GIGGAERLVVDAALALQSR-G-HEVTIYTSHHD--PS-HCFE--------------- 47 (392)
T ss_pred CeEEEECCC-C------------CCchHHHHHHHHHHHHHhC-C-CeEEEEcCCCC--ch-hcch---------------
Confidence 799999752 2 2589999999999999999 8 99999996421 00 0000
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 325 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~ 325 (1054)
+. ...++.+..++.. .++. ++.....+ ..++......+...+. ...+|||||+|....+.....
T Consensus 48 -~~-~~~~~~i~~~~~~-----~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~Dvi~~~~~~~~~~~~~-- 111 (392)
T cd03805 48 -ET-KDGTLPVRVRGDW-----LPRS-IFGRFHIL----CAYLRMLYLALYLLLL--PDEKYDVFIVDQVSACVPLLK-- 111 (392)
T ss_pred -hc-cCCeeEEEEEeEE-----Ecch-hhHhHHHH----HHHHHHHHHHHHHHhc--ccCCCCEEEEcCcchHHHHHH--
Confidence 00 0112444443211 1111 11111111 1111111111100011 124699999997654433222
Q ss_pred ccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhH-HHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHH
Q 001557 326 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYK-IMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1054)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~-~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~ 404 (1054)
...+.|+|++.|.. +... .. . ...+...++ +.++ .|+++++.+|.|+++|+...+.+...|+....
T Consensus 112 ~~~~~~~i~~~h~~--~~~~---~~-~--~~~~~~~~~~~~~~--~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~--- 178 (392)
T cd03805 112 LFSPSKILFYCHFP--DQLL---AQ-R--GSLLKRLYRKPFDW--LEEFTTGMADKIVVNSNFTASVFKKTFPSLAK--- 178 (392)
T ss_pred HhcCCcEEEEEecC--hHHh---cC-C--CcHHHHHHHHHHHH--HHHHHhhCceEEEEcChhHHHHHHHHhccccc---
Confidence 22248999999932 2210 00 0 001111221 2223 37788999999999999887766555543211
Q ss_pred HHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCC
Q 001557 405 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 484 (1054)
Q Consensus 405 ~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl 484 (1054)
..+.|||||+|.+.|.+..... ........++.++|+++||+
T Consensus 179 ------------------~~~~vi~n~vd~~~~~~~~~~~--------------------~~~~~~~~~~~~~i~~~grl 220 (392)
T cd03805 179 ------------------NPREVVYPCVDTDSFESTSEDP--------------------DPGLLIPKSGKKTFLSINRF 220 (392)
T ss_pred ------------------CCcceeCCCcCHHHcCcccccc--------------------cccccccCCCceEEEEEeee
Confidence 1346999999998887532110 00112234677899999999
Q ss_pred CCCCCHHHHHHHHHhcccccC-CCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHH-cCCCCCEEeCCCCCCCcHHHHH
Q 001557 485 DPKKNITTLVKAFGECRPLRE-LANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDK-YDLYGQVAYPKHHKQSDVPDIY 561 (1054)
Q Consensus 485 d~~Kgi~~ll~A~~~l~~~~~-~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~-~~l~~~V~~~g~~~~~dl~~ly 561 (1054)
.+.||++.+++|+.++....+ .+++.| ++|+++.. .....++...+.+++++ +++.++|.|+|+++.+++..+|
T Consensus 221 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~---~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l 297 (392)
T cd03805 221 ERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPR---VAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLL 297 (392)
T ss_pred cccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCC---CchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHH
Confidence 999999999999999864321 145555 67776531 11234567788899999 8999999999999999999999
Q ss_pred HHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001557 562 RLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCR 641 (1054)
Q Consensus 562 ~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~ 641 (1054)
+.| |++|+||..|+||++++||||||+|||+++.||..|++.++.+|+++++ |+++++++|.+++++++.+++++
T Consensus 298 ~~a----d~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~ 372 (392)
T cd03805 298 SSA----RALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMG 372 (392)
T ss_pred hhC----eEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChHHHHHHH
Confidence 999 9999999999999999999999999999999999999999889999976 99999999999999999999999
Q ss_pred HHHHHHH-hcCCHHHHHHHH
Q 001557 642 QNGLKNI-HQFSWPEHCKSY 660 (1054)
Q Consensus 642 ~~~~~~v-~~fsw~~~a~~y 660 (1054)
+++++.+ ++|||+.++++|
T Consensus 373 ~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 373 AAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHHhcCHHHHhhhC
Confidence 9999998 799999998764
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=318.21 Aligned_cols=368 Identities=17% Similarity=0.215 Sum_probs=260.3
Q ss_pred EEEEEecccccccCCcCCCCCC-CCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDS-DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~-~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
||+++++--+ +-+| ..||+++++.++++.|+ ++|+++|.... ++.. .+
T Consensus 4 ~~~~~~~~~~--------~~p~~~~g~ve~~~~~~~~~l~-----~~~~~~~~~~~------~~~~-~~----------- 52 (380)
T PRK15484 4 KIIFTVTPIF--------SIPPRGAAAVETWIYQVAKRTS-----IPNRIACIKNP------GYPE-YT----------- 52 (380)
T ss_pred eEEEEeccCC--------CCCCccccHHHHHHHHhhhhcc-----CCeeEEEecCC------CCCc-hh-----------
Confidence 7888876433 2223 46999999999999993 47999997631 1111 00
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCCh--HHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHI--PEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAAL 323 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l--~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~ 323 (1054)
...+|+.++++++... |......|..+ ..+...++..+. . .....+||||+|... .+...+
T Consensus 53 ---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~vi~v~~~~-~~~~~~ 115 (380)
T PRK15484 53 ---KVNDNCDIHYIGFSRI--YKRLFQKWTRLDPLPYSQRILNIAH-------K----FTITKDSVIVIHNSM-KLYRQI 115 (380)
T ss_pred ---hccCCCceEEEEeccc--cchhhhhhhccCchhHHHHHHHHHH-------h----cCCCCCcEEEEeCcH-HhHHHH
Confidence 1124677777765321 10000011000 011111111111 1 111459999999853 344444
Q ss_pred HHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHH
Q 001557 324 LSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403 (1054)
Q Consensus 324 l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l 403 (1054)
..+..++|+|++.|+.+... .+..++.|+++|+...+.+...++.
T Consensus 116 ~~~~~~~~~v~~~h~~~~~~------------------------------~~~~~~~ii~~S~~~~~~~~~~~~~----- 160 (380)
T PRK15484 116 RERAPQAKLVMHMHNAFEPE------------------------------LLDKNAKIIVPSQFLKKFYEERLPN----- 160 (380)
T ss_pred HhhCCCCCEEEEEecccChh------------------------------HhccCCEEEEcCHHHHHHHHhhCCC-----
Confidence 55567899999999753111 1346789999998776654433221
Q ss_pred HHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeC
Q 001557 404 ERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALAR 483 (1054)
Q Consensus 404 ~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgR 483 (1054)
.++.+||||+|...|.+... .....++...++.++|+++||
T Consensus 161 -------------------~~i~vIpngvd~~~~~~~~~--------------------~~~~~~~~~~~~~~~il~~Gr 201 (380)
T PRK15484 161 -------------------ADISIVPNGFCLETYQSNPQ--------------------PNLRQQLNISPDETVLLYAGR 201 (380)
T ss_pred -------------------CCEEEecCCCCHHHcCCcch--------------------HHHHHHhCCCCCCeEEEEecc
Confidence 27999999999887764210 011223333456789999999
Q ss_pred CCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHH
Q 001557 484 PDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYR 562 (1054)
Q Consensus 484 ld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~ 562 (1054)
+.+.||++.+++|+..+.+ ..+++.| |+|+++.... .+...+...+.+++..++ .+|.|.|+++.+++..+|+
T Consensus 202 l~~~Kg~~~Li~A~~~l~~--~~p~~~lvivG~g~~~~~--~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~~~~ 275 (380)
T PRK15484 202 ISPDKGILLLMQAFEKLAT--AHSNLKLVVVGDPTASSK--GEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHNYYP 275 (380)
T ss_pred CccccCHHHHHHHHHHHHH--hCCCeEEEEEeCCccccc--cchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHHH
Confidence 9999999999999999864 3455655 6787653211 122345667777777766 5789999999999999999
Q ss_pred HhhcCCcEEEecCC-CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceE-EeCCCCHHHHHHHHHHHHhCHHHHHHH
Q 001557 563 LAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGL-LVDPHDQQSIADALLKLVSDKQLWERC 640 (1054)
Q Consensus 563 ~Aa~~~dv~v~ps~-~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gl-lv~p~d~~~la~aI~~ll~d~~~~~~~ 640 (1054)
.| |++|+||. .|+||++++||||||+|||+|+.||.+|++.++.+|+ +++|.|+++++++|.++++|++. .++
T Consensus 276 ~a----Dv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~-~~~ 350 (380)
T PRK15484 276 LA----DLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL-TQI 350 (380)
T ss_pred hC----CEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHH-HHH
Confidence 99 99999997 5999999999999999999999999999999999998 66899999999999999999985 679
Q ss_pred HHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 641 RQNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 641 ~~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
++++++.+ ++|||+.++++|++.|+..
T Consensus 351 ~~~ar~~~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 351 AEQAKDFVFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 99999988 7999999999999999754
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=333.16 Aligned_cols=391 Identities=15% Similarity=0.097 Sum_probs=261.1
Q ss_pred Ccce-EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCc-------------eEEEEEecCcCCCCCCCc
Q 001557 163 EKKL-YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGV-------------YRVDLLTRQVSAPDVDWT 228 (1054)
Q Consensus 163 ~~~m-kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv-------------~~V~vvt~~~~~p~~~~~ 228 (1054)
.++. ||++|.. ++ ..||+++++..|+.+|.++ +. ..|.+++.... +..
T Consensus 278 ~~~~~rIl~vi~-sl------------~~GGAEr~~~~La~~l~~~-~~~~~~~~g~g~~~~~~V~~~~~~~~-~g~--- 339 (694)
T PRK15179 278 ESFVGPVLMING-SL------------GAGGAERQFVNTAVALQSA-IQQGQSIAGYGVLGPVQVVCRSLRSR-EGA--- 339 (694)
T ss_pred CCCcceEEEEeC-CC------------CCCcHHHHHHHHHHHHHhc-ccCcccccCccCCCCcEEEEEecccc-cCc---
Confidence 4566 8999975 32 3489999999999999998 31 13444432100 000
Q ss_pred cCCcccccccccccccccccCCCCCeEEEEccCCCCCccccccc-CCCChHHH----HHHHHHHHHHHHHHHhhhhcCCC
Q 001557 229 YAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKEL-LWPHIPEF----VDAALTHIIQISKVLGEQVGSGQ 303 (1054)
Q Consensus 229 ~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~-l~~~l~~f----~~~~l~~i~~~~k~L~~~~~~~~ 303 (1054)
+.....+ ...|+.+..++..+. ....... ....+..+ .......+..+.+.+.+
T Consensus 340 -~~~~~~L-------------~~~Gv~v~~l~~~~~-~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~------ 398 (694)
T PRK15179 340 -DFFAATL-------------ADAGIPVSVYSDMQA-WGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS------ 398 (694)
T ss_pred -chHHHHH-------------HhCCCeEEEeccCCc-cCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHH------
Confidence 0000001 124888888765432 1111000 00111110 01122223333333333
Q ss_pred CCcceEEEEcCCCchHHHHHHHccCCCCEEE-EeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEE
Q 001557 304 PIWPVAIHGHYADAGDAAALLSGALNVPMVF-TGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVI 382 (1054)
Q Consensus 304 ~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~-t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi 382 (1054)
.+|||||+|...+..++.+.++..++|+|+ +.|++........ ....+.... .......++.++
T Consensus 399 -~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~~~----------~~~~~~~l~----~~l~~~~~~i~V 463 (694)
T PRK15179 399 -SVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRPDR----------YRVEYDIIY----SELLKMRGVALS 463 (694)
T ss_pred -cCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccchhH----------HHHHHHHHH----HHHHhcCCeEEE
Confidence 569999999987777778888778999977 5676532211100 001111111 111222345667
Q ss_pred ecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
+.|....+.+...++ .+..++.|||||||...|.+..... ..
T Consensus 464 s~S~~~~~~l~~~~g----------------------~~~~kI~VI~NGVd~~~f~~~~~~~----------------~~ 505 (694)
T PRK15179 464 SNSQFAAHRYADWLG----------------------VDERRIPVVYNGLAPLKSVQDDACT----------------AM 505 (694)
T ss_pred eCcHHHHHHHHHHcC----------------------CChhHEEEECCCcCHHhcCCCchhh----------------HH
Confidence 777766555433332 1223899999999988876421100 00
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcC
Q 001557 463 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYD 541 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~ 541 (1054)
+... +...+.+.++|+++||+.+.||++.+|+|+..+.+. .+++.| |+|+++. ...+.+++.+++
T Consensus 506 ~~~~-~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~--~p~~~LvIvG~G~~-----------~~~L~~l~~~lg 571 (694)
T PRK15179 506 MAQF-DARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAAS--HPKVRFIMVGGGPL-----------LESVREFAQRLG 571 (694)
T ss_pred HHhh-ccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHH--CcCeEEEEEccCcc-----------hHHHHHHHHHcC
Confidence 0000 111234567899999999999999999999988643 345555 7788764 356788999999
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCH-
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ- 620 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~- 620 (1054)
+.++|.|+|+. ++++.+|+.| |+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++|+|+|+
T Consensus 572 L~~~V~flG~~--~dv~~ll~aa----Dv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~ 645 (694)
T PRK15179 572 MGERILFTGLS--RRVGYWLTQF----NAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVT 645 (694)
T ss_pred CCCcEEEcCCc--chHHHHHHhc----CEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCC
Confidence 99999999995 5899999999 9999999999999999999999999999999999999999999999998774
Q ss_pred -HHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 621 -QSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 621 -~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
++++++|.+++.+......+++++++.+ ++|||+.++++|+++|+
T Consensus 646 ~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 646 APDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred hHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 6899999998887666667888999998 69999999999999985
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=311.90 Aligned_cols=243 Identities=24% Similarity=0.349 Sum_probs=185.8
Q ss_pred CEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL~---~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
++||++|+||||. ......+.+.++...+ +++.|+++|||++.++.+++++.++ +.||++||++|++||+.
T Consensus 2 ~~ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~~----~~~~~v~~TGRs~~~~~~~~~~~~l--~~Pd~~I~svGt~I~~~ 75 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGDDEALARLEELLEQQAR----PEILFVYVTGRSLESVLRLLREYNL--PQPDYIITSVGTEIYYG 75 (247)
T ss_dssp SEEEEEETBTTTBHCHHHHHHHHHHHHHHHHC----CGEEEEEE-SS-HHHHHHHHHHCT---EE-SEEEETTTTEEEES
T ss_pred CEEEEEECCCCCcCCCHHHHHHHHHHHHHhhC----CCceEEEECCCCHHHHHHHHHhCCC--CCCCEEEecCCeEEEEc
Confidence 5999999999995 3445566666662223 5899999999999999999999998 46999999999999995
Q ss_pred CCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCccHHH
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKE 925 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~~~~e 925 (1054)
. .+.+|..|..++...|..+.+++++.++++...+. ...+..||++|++........+++
T Consensus 76 ~---------~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~-----------~~~q~~~k~sy~~~~~~~~~~~~~ 135 (247)
T PF05116_consen 76 E---------NWQPDEEWQAHIDERWDRERVEEILAELPGLRPQP-----------ESEQRPFKISYYVDPDDSADILEE 135 (247)
T ss_dssp S---------TTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGG-----------CCCGCCTCECEEEETTSHCHHHHH
T ss_pred C---------CCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCC-----------ccccCCeeEEEEEecccchhHHHH
Confidence 3 57789999999999999999999988887654433 356778999999976554444789
Q ss_pred HHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcch
Q 001557 926 LRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGE 1005 (1054)
Q Consensus 926 l~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~ 1005 (1054)
|++.+++.+.++++++|++. ++||+|+++|||.||+||+++|+++++++++ +||++| | ++||.....||+|+||.
T Consensus 136 i~~~l~~~~l~~~~i~s~~~-~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~-aGDSgN-D-~~mL~~~~~~vvV~Na~- 210 (247)
T PF05116_consen 136 IRARLRQRGLRVNVIYSNGR-DLDILPKGASKGAALRYLMERWGIPPEQVLV-AGDSGN-D-LEMLEGGDHGVVVGNAQ- 210 (247)
T ss_dssp HHHHHHCCTCEEEEEECTCC-EEEEEETT-SHHHHHHHHHHHHT--GGGEEE-EESSGG-G-HHHHCCSSEEEE-TTS--
T ss_pred HHHHHHHcCCCeeEEEccce-eEEEccCCCCHHHHHHHHHHHhCCCHHHEEE-EeCCCC-c-HHHHcCcCCEEEEcCCC-
Confidence 99999999999999999885 9999999999999999999999999999999 899999 9 99999999999999999
Q ss_pred hHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhcc
Q 001557 1006 SARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGV 1050 (1054)
Q Consensus 1006 ~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~~ 1050 (1054)
.+++.+...- ....++++++ ....++||.+||+||||
T Consensus 211 -~e~~~~~~~~------~~~~~~iy~a-~~~~a~GIlegl~~~~~ 247 (247)
T PF05116_consen 211 -PELLSWLLEK------LRQQERIYFA-QGPYAAGILEGLQHFGF 247 (247)
T ss_dssp -HHHHHHHHHC------C-TTE--EE--SS-THHHHHHHHHHTTT
T ss_pred -HHHHHHHHHh------cccCCceEec-CCCCcHHHHHHHHHcCC
Confidence 3322211100 1123355555 56679999999999996
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-32 Score=309.62 Aligned_cols=360 Identities=20% Similarity=0.233 Sum_probs=255.9
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++|+.+++ +|..||+++++.+|+++|.++ | |+|+|+|.....+. .
T Consensus 1 ~i~~i~~~~~----------~~~~gG~~~~~~~la~~L~~~-g-~~v~v~~~~~~~~~-------~-------------- 47 (363)
T cd04955 1 KIAIIGTRGI----------PAKYGGFETFVEELAPRLVAR-G-HEVTVYCRSPYPKQ-------K-------------- 47 (363)
T ss_pred CeEEEecCcC----------CcccCcHHHHHHHHHHHHHhc-C-CCEEEEEccCCCCC-------c--------------
Confidence 6899988776 467899999999999999999 8 99999997531110 0
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHc
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 326 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~ 326 (1054)
.....|+.++++|..... . +..+ ...+..+.+.+.. ..++|+||...... ..+..+.+
T Consensus 48 -~~~~~~i~~~~~~~~~~~-~---------~~~~----~~~~~~~~~~~~~------~~~~~~i~~~~~~~-~~~~~~~~ 105 (363)
T cd04955 48 -ETEYNGVRLIHIPAPEIG-G---------LGTI----IYDILAILHALFV------KRDIDHVHALGPAI-APFLPLLR 105 (363)
T ss_pred -ccccCCceEEEcCCCCcc-c---------hhhh----HHHHHHHHHHHhc------cCCeEEEEecCccH-HHHHHHHH
Confidence 012358888888754310 0 0001 1111111111111 13466776665444 33334445
Q ss_pred cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHH
Q 001557 327 ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406 (1054)
Q Consensus 327 ~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 406 (1054)
..++|+|++.|+....... + +. ....+.+. .|+.+++.+|.|+++|+...+.+...|+.
T Consensus 106 ~~~~~~v~~~h~~~~~~~~-~---~~-------~~~~~~~~--~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-------- 164 (363)
T cd04955 106 LKGKKVVVNMDGLEWKRAK-W---GR-------PAKRYLKF--GEKLAVKFADRLIADSPGIKEYLKEKYGR-------- 164 (363)
T ss_pred hcCCCEEEEccCcceeecc-c---cc-------chhHHHHH--HHHHHHhhccEEEeCCHHHHHHHHHhcCC--------
Confidence 5699999999987432210 0 00 01122222 35667899999999999887776454432
Q ss_pred HHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCC
Q 001557 407 LRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDP 486 (1054)
Q Consensus 407 l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~ 486 (1054)
+..+||||+|...+.+.. ....... .++.+.|+++||+.+
T Consensus 165 -----------------~~~~i~ngv~~~~~~~~~----------------------~~~~~~~-~~~~~~i~~~G~~~~ 204 (363)
T cd04955 165 -----------------DSTYIPYGADHVVSSEED----------------------EILKKYG-LEPGRYYLLVGRIVP 204 (363)
T ss_pred -----------------CCeeeCCCcChhhcchhh----------------------hhHHhcC-CCCCcEEEEEecccc
Confidence 338999999987665300 0011111 234567899999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHH-HcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001557 487 KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID-KYDLYGQVAYPKHHKQSDVPDIYRLAA 565 (1054)
Q Consensus 487 ~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~-~~~l~~~V~~~g~~~~~dl~~ly~~Aa 565 (1054)
.||++.+++|+..+.. ...+ +++|+++.... +.+.+. .++..++|.|+|+++.+++..+|+.|
T Consensus 205 ~Kg~~~li~a~~~l~~---~~~l-~ivG~~~~~~~-----------~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~a- 268 (363)
T cd04955 205 ENNIDDLIEAFSKSNS---GKKL-VIVGNADHNTP-----------YGKLLKEKAAADPRIIFVGPIYDQELLELLRYA- 268 (363)
T ss_pred cCCHHHHHHHHHhhcc---CceE-EEEcCCCCcch-----------HHHHHHHHhCCCCcEEEccccChHHHHHHHHhC-
Confidence 9999999999998842 2233 47788754222 222222 56777899999999999999999999
Q ss_pred cCCcEEEecCCC-CCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001557 566 KTKGVFINPAFI-EPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNG 644 (1054)
Q Consensus 566 ~~~dv~v~ps~~-Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 644 (1054)
|++++||.. |+||++++||||||+|||+|+.|+..|++.+ +|+++++.|. ++++|.+++++++.+.++++++
T Consensus 269 ---d~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~~ 341 (363)
T cd04955 269 ---ALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELEADPEEVSAMAKAA 341 (363)
T ss_pred ---CEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHHhCHHHHHHHHHHH
Confidence 999999998 9999999999999999999999999999865 8999987776 9999999999999999999999
Q ss_pred HHHH-hcCCHHHHHHHHHHHHH
Q 001557 645 LKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 645 ~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
++.+ +.|||+.++++|+++|+
T Consensus 342 ~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 342 RERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHhCCHHHHHHHHHHHhC
Confidence 9998 58999999999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=313.39 Aligned_cols=278 Identities=26% Similarity=0.385 Sum_probs=224.7
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+||+||+|....+..+..+++.+|+|+|++.|+............ . .++..+. .+...++.+|.|+++
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~---~------~~~~~~~--~~~~~~~~~d~ii~~ 149 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALLLR---S------RWALYAR--RRRRLARRAALFIAV 149 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhhcc---c------chhHHHH--HHHHHHHhcCEEEEC
Confidence 5699999998777777888888899999999997533221111000 0 0111111 245578999999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+... +..+ +++.++|||+|.+.|.+...
T Consensus 150 s~~~~~~~~~~--~~~~---------------------~~i~vi~~g~d~~~~~~~~~---------------------- 184 (367)
T cd05844 150 SQFIRDRLLAL--GFPP---------------------EKVHVHPIGVDTAKFTPATP---------------------- 184 (367)
T ss_pred CHHHHHHHHHc--CCCH---------------------HHeEEecCCCCHHhcCCCCC----------------------
Confidence 99877665432 2222 27999999999988764311
Q ss_pred HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCC
Q 001557 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~ 543 (1054)
..+.+.|+++|++.+.||++.+++|+..+.+. .+++.| ++|+++. ...+.++++++++.
T Consensus 185 -------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~ 244 (367)
T cd05844 185 -------ARRPPRILFVGRFVEKKGPLLLLEAFARLARR--VPEVRLVIIGDGPL-----------LAALEALARALGLG 244 (367)
T ss_pred -------CCCCcEEEEEEeeccccChHHHHHHHHHHHHh--CCCeEEEEEeCchH-----------HHHHHHHHHHcCCC
Confidence 13567899999999999999999999998643 345555 7787642 45677888898888
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC------CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCC
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF------IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDP 617 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~------~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p 617 (1054)
++|.|.|.++.+++..+|+.| |++|+||. .|+||++++||||||+|||+++.|+..|++.++.+|+++++
T Consensus 245 ~~v~~~g~~~~~~l~~~~~~a----d~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 245 GRVTFLGAQPHAEVRELMRRA----RIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred CeEEECCCCCHHHHHHHHHhC----CEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECC
Confidence 999999999999999999999 99999996 59999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHH
Q 001557 618 HDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLS 662 (1054)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~ 662 (1054)
.|+++++++|.+++++++.+++++.++++.+ ++|||+.+++++.+
T Consensus 321 ~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 321 GDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999999999999999999999 69999999998865
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-32 Score=313.37 Aligned_cols=382 Identities=15% Similarity=0.132 Sum_probs=250.6
Q ss_pred CcHhHHHHH----HHHHHhcCCCce--------EEEEEecCcCCCCCCCccCCccccccccccccccccc--CCCCCeEE
Q 001557 191 GGQVKYVVE----LARALGSMPGVY--------RVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGL--GESSGAYI 256 (1054)
Q Consensus 191 GG~~~~v~e----La~aLa~~~Gv~--------~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~g~~i 256 (1054)
||+++.+.. +++++.+. + - -|+|+++...+ ....++ |..+. ...++..+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~-~~~~~~--------------~~~~~~~~~~~~~~~ 236 (578)
T PRK15490 174 GGAERQISRLAIEIARKYRQK-G-KIGGLKVEEPVELIIRSLTP-ELRQDF--------------FLKEVLEEQVEVLEI 236 (578)
T ss_pred CchHHHHHHHHHHHHHHHHhc-c-cccccccccceeEEEeecCc-ccCcch--------------hHHHHHhcCCceEEe
Confidence 999999994 45554443 2 2 58899987642 111111 11111 12234444
Q ss_pred EEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEE-
Q 001557 257 IRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFT- 335 (1054)
Q Consensus 257 ~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t- 335 (1054)
-.++ .+.|-.-..+.|.+..|+..+-..+..-...|..++.. .+|||||+|...+...+.+.+...++|++++
T Consensus 237 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ir~---~rpDIVHt~~~~a~l~g~laA~lagvpviv~~ 310 (578)
T PRK15490 237 AKIT---GNLFDDATIESPELRLLLSHLPPVCKYGIKHLVPHLCE---RKLDYLSVWQDGACLMIALAALIAGVPRIQLG 310 (578)
T ss_pred eccc---hhhhhhccccchHHHHHHhcCChHHHHHHHHHHHHHHH---cCCCEEEEcCcccHHHHHHHHHhcCCCEEEEe
Confidence 4444 22222222344544454443322222222223333322 6799999998777677777777779999654
Q ss_pred eCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhccc
Q 001557 336 GHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGV 415 (1054)
Q Consensus 336 ~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv 415 (1054)
.|++.......+ +...+...++ -..+...+| +++.|....+.+...+ +.
T Consensus 311 ~h~~~~~~~~r~----------~~~e~~~~~~---a~~i~~~sd-~v~~s~~v~~~l~~~l-gi---------------- 359 (578)
T PRK15490 311 LRGLPPVVRKRL----------FKPEYEPLYQ---ALAVVPGVD-FMSNNHCVTRHYADWL-KL---------------- 359 (578)
T ss_pred ecccCCcchhhH----------HHHHHHHhhh---hceeEecch-hhhccHHHHHHHHHHh-CC----------------
Confidence 665322111100 0011111100 001233344 4455554444433332 22
Q ss_pred ccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHH
Q 001557 416 SCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVK 495 (1054)
Q Consensus 416 ~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~ 495 (1054)
+..++.|||||||...|.+..... ...+... +....++.++|+++||+.+.||+..+++
T Consensus 360 -----p~~KI~VIyNGVD~~rf~p~~~~~---------------~~~r~~~-~~~l~~~~~vIg~VgRl~~~Kg~~~LI~ 418 (578)
T PRK15490 360 -----EAKHFQVVYNGVLPPSTEPSSEVP---------------HKIWQQF-TQKTQDADTTIGGVFRFVGDKNPFAWID 418 (578)
T ss_pred -----CHHHEEEEeCCcchhhcCccchhh---------------HHHHHHh-hhccCCCCcEEEEEEEEehhcCHHHHHH
Confidence 233899999999999887632100 0011111 1112356689999999999999999999
Q ss_pred HHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEec
Q 001557 496 AFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINP 574 (1054)
Q Consensus 496 A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~p 574 (1054)
++..+.+. .+++.| |+|+++. ...+.+++.++++.++|.|+|+ .+|++.+|+.| |+||+|
T Consensus 419 A~a~llk~--~pdirLvIVGdG~~-----------~eeLk~la~elgL~d~V~FlG~--~~Dv~~~LaaA----DVfVlP 479 (578)
T PRK15490 419 FAARYLQH--HPATRFVLVGDGDL-----------RAEAQKRAEQLGILERILFVGA--SRDVGYWLQKM----NVFILF 479 (578)
T ss_pred HHHHHHhH--CCCeEEEEEeCchh-----------HHHHHHHHHHcCCCCcEEECCC--hhhHHHHHHhC----CEEEEc
Confidence 99887543 355654 7788764 4567888999999999999998 57999999999 999999
Q ss_pred CCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHH---HHHHhCHHHHHHHHHHHHHHH-hc
Q 001557 575 AFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADAL---LKLVSDKQLWERCRQNGLKNI-HQ 650 (1054)
Q Consensus 575 s~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI---~~ll~d~~~~~~~~~~~~~~v-~~ 650 (1054)
|.+||||++++||||||+|||+|+.||..|+|.++.+|++|++.|++++++++ .++.........+++++++.+ ++
T Consensus 480 S~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~ 559 (578)
T PRK15490 480 SRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQER 559 (578)
T ss_pred ccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998887 344445555567889999999 69
Q ss_pred CCHHHHHHHHHHHHHH
Q 001557 651 FSWPEHCKSYLSRISS 666 (1054)
Q Consensus 651 fsw~~~a~~yl~~l~~ 666 (1054)
|||+.++++|.++|..
T Consensus 560 FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 560 FTVEHMVGTFVKTIAS 575 (578)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999999999999974
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=317.00 Aligned_cols=284 Identities=19% Similarity=0.228 Sum_probs=207.6
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+|||||+|++....+ ....+..++|+|++.|+...... ...+++. +..++.+|.+++.
T Consensus 84 ~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~~--------------~~~~~~~------~~~~~~~d~~i~~ 142 (372)
T cd03792 84 LDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSPN--------------RRVWDFL------QPYIEDYDAAVFH 142 (372)
T ss_pred CCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCCc--------------HHHHHHH------HHHHHhCCEEeec
Confidence 4699999998754322 22233348999999997532110 0111222 2346788999888
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh-
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW- 463 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~- 463 (1054)
|...+.. .+. . +..+||||||........ ..+...
T Consensus 143 ~~~~~~~------~~~---------------------~-~~~vipngvd~~~~~~~~----------------~~~~~~~ 178 (372)
T cd03792 143 LPEYVPP------QVP---------------------P-RKVIIPPSIDPLSGKNRE----------------LSPADIE 178 (372)
T ss_pred HHHhcCC------CCC---------------------C-ceEEeCCCCCCCccccCC----------------CCHHHHH
Confidence 7432211 111 1 333999999975322110 011111
Q ss_pred HHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCC
Q 001557 464 SEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~ 543 (1054)
..+.++...+++++|+++||+++.||++.+++|+..+.+..+...+ +++|+++..+.. ....+.++.+..++.
T Consensus 179 ~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l-~i~G~g~~~~~~------~~~~~~~~~~~~~~~ 251 (372)
T cd03792 179 YILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQL-VLVGSGATDDPE------GWIVYEEVLEYAEGD 251 (372)
T ss_pred HHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEE-EEEeCCCCCCch------hHHHHHHHHHHhCCC
Confidence 2233455567889999999999999999999999998653333333 477887542111 112233444456677
Q ss_pred CCEEeCCCC--CCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHH
Q 001557 544 GQVAYPKHH--KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ 621 (1054)
Q Consensus 544 ~~V~~~g~~--~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~ 621 (1054)
++|.|.|.. +.+++..+|+.| |+|++||..||||++++||||||+|||+++.||..+++.++.+|++++ +.+
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~a----d~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~ 325 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRAS----TVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVE 325 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhC----eEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcH
Confidence 789998876 788999999999 999999999999999999999999999999999999999999999997 567
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHH
Q 001557 622 SIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 622 ~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~ 666 (1054)
+++.+|.+++++++++++|++++++.+ ++|+|+..+++|+++|+.
T Consensus 326 ~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 326 EAAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 899999999999999999999999998 699999999999999975
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-31 Score=304.50 Aligned_cols=341 Identities=24% Similarity=0.290 Sum_probs=255.0
Q ss_pred CCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcccc
Q 001557 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 269 (1054)
Q Consensus 190 tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~ 269 (1054)
.||.++++.+|+++|+++ | |+|.+++.... .... ....|+.++.++.....
T Consensus 9 ~gG~e~~~~~l~~~L~~~-g-~~v~v~~~~~~----------~~~~-------------~~~~~~~~~~~~~~~~~---- 59 (355)
T cd03819 9 SGGVERGTLELARALVER-G-HRSLVASAGGR----------LVAE-------------LEAEGSRHIKLPFISKN---- 59 (355)
T ss_pred cCcHHHHHHHHHHHHHHc-C-CEEEEEcCCCc----------hHHH-------------HHhcCCeEEEccccccc----
Confidence 389999999999999999 8 99999985310 0000 11236777777654321
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHH
Q 001557 270 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLK 349 (1054)
Q Consensus 270 k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~ 349 (1054)
.+.. +..+..+.+.+.+ .+||+||+|+......+.+.++..++|+|++.|+......
T Consensus 60 ---~~~~--------~~~~~~l~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~----- 116 (355)
T cd03819 60 ---PLRI--------LLNVARLRRLIRE-------EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF----- 116 (355)
T ss_pred ---hhhh--------HHHHHHHHHHHHH-------cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH-----
Confidence 1111 1111222223322 5699999998777777777777889999999998743220
Q ss_pred hCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeC
Q 001557 350 QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 429 (1054)
Q Consensus 350 ~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIP 429 (1054)
+ ....+..+|.++++|+...+.+...|+. +..++.+||
T Consensus 117 --------------~------~~~~~~~~~~vi~~s~~~~~~~~~~~~~----------------------~~~k~~~i~ 154 (355)
T cd03819 117 --------------R------YNAIMARGDRVIAVSNFIADHIRENYGV----------------------DPDRIRVIP 154 (355)
T ss_pred --------------H------HHHHHHhcCEEEEeCHHHHHHHHHhcCC----------------------ChhhEEEec
Confidence 1 1224678999999999877765433322 223899999
Q ss_pred CCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH-HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 001557 430 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS-EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELAN 508 (1054)
Q Consensus 430 nGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~ 508 (1054)
||+|...|.+.... ...+. .+.++...++.++|+++||+.+.||++.+++|+..+... .++
T Consensus 155 ngi~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~--~~~ 216 (355)
T cd03819 155 RGVDLDRFDPGAVP----------------PERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKKD--DPD 216 (355)
T ss_pred CCccccccCccccc----------------hHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHhc--CCC
Confidence 99999888643211 01111 223333456778999999999999999999999998643 345
Q ss_pred EEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecC-CCCCCcHHHHH
Q 001557 509 LTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPA-FIEPFGLTLIE 586 (1054)
Q Consensus 509 l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps-~~Egfgl~l~E 586 (1054)
+.+ ++|.++..+. +...+.+.+.++++.++|.|+|+ .+++..+|+.| |++|+|| ..|+||++++|
T Consensus 217 ~~l~ivG~~~~~~~-------~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~a----d~~i~ps~~~e~~~~~l~E 283 (355)
T cd03819 217 VHLLIVGDAQGRRF-------YYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALA----DIVVSASTEPEAFGRTAVE 283 (355)
T ss_pred eEEEEEECCcccch-------HHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhC----CEEEecCCCCCCCchHHHH
Confidence 655 7787764322 34556678888898889999999 78999999999 9999999 79999999999
Q ss_pred HHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH-hcCCHHH
Q 001557 587 AAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNI-HQFSWPE 655 (1054)
Q Consensus 587 AmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v-~~fsw~~ 655 (1054)
|||||+|||+++.||..|++.++.+|+++++.|+++++++|..++. +++++.++++++++.+ ++|+|+.
T Consensus 284 A~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~ 354 (355)
T cd03819 284 AQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDR 354 (355)
T ss_pred HHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999999999889999999999999999976665 8999999999999999 6999975
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-31 Score=316.22 Aligned_cols=293 Identities=22% Similarity=0.288 Sum_probs=233.1
Q ss_pred CcceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHH-HHHHhCCCChhhhhh-HhHHHHHHHHHHhhhccCCEE
Q 001557 305 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLE-QLLKQGRLSRDEINT-TYKIMRRIEAEELSLDASEIV 381 (1054)
Q Consensus 305 ~~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~-~l~~~g~~~~~~i~~-~~~~~~ri~~E~~~l~~ad~V 381 (1054)
.++||||+|.. .+++++..+++..++|+|+|.|++...... .+.... +....... ..+++++ .++.+++.||.|
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~--l~~~~~~~ad~I 248 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQAD-WEMSYFRRLWIRFFES--LGRLAYQAADRI 248 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcc-cchHHHHHHHHHHHHH--HHHHHHHhCCEE
Confidence 36899999975 567788888888999999999997653322 121111 01111111 1122333 367789999999
Q ss_pred EecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCc
Q 001557 382 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPP 461 (1054)
Q Consensus 382 i~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1054)
++.|+...+.+.. + +..+ .++.|||||+|.+.|.+....
T Consensus 249 i~~s~~~~~~~~~-~-g~~~---------------------~ki~vIpNgid~~~f~~~~~~------------------ 287 (475)
T cd03813 249 TTLYEGNRERQIE-D-GADP---------------------EKIRVIPNGIDPERFAPARRA------------------ 287 (475)
T ss_pred EecCHHHHHHHHH-c-CCCH---------------------HHeEEeCCCcCHHHcCCcccc------------------
Confidence 9999976654422 2 2222 289999999999988753210
Q ss_pred hhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHc
Q 001557 462 IWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKY 540 (1054)
Q Consensus 462 ~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~ 540 (1054)
...++.++|+++||+.+.||++.+++|+..+.+. .+++.+ |+|+++.- ..+..++.++++++
T Consensus 288 --------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~p~~~l~IvG~g~~~-------~~~~~e~~~li~~l 350 (475)
T cd03813 288 --------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKK--IPDAEGWVIGPTDED-------PEYAEECRELVESL 350 (475)
T ss_pred --------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHh--CCCeEEEEECCCCcC-------hHHHHHHHHHHHHh
Confidence 0135678999999999999999999999998643 456665 77887521 34577889999999
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceee------CCceEE
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV------LDNGLL 614 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~------~~~Gll 614 (1054)
++.++|.|+| .+++.++|+.| |++|+||..|+||++++||||||+|||+|+.|+..|++.+ +.+|++
T Consensus 351 ~l~~~V~f~G---~~~v~~~l~~a----Dv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~l 423 (475)
T cd03813 351 GLEDNVKFTG---FQNVKEYLPKL----DVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEV 423 (475)
T ss_pred CCCCeEEEcC---CccHHHHHHhC----CEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEE
Confidence 9999999999 57999999999 9999999999999999999999999999999999999988 568999
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 615 VDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 615 v~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
++|.|+++++++|.++++|++.++++++++++.+ +.|+|+.++++|.++|+
T Consensus 424 v~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 424 VPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999 68999999999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-30 Score=305.77 Aligned_cols=378 Identities=15% Similarity=0.107 Sum_probs=247.6
Q ss_pred CcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCccccc
Q 001557 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQK 270 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k 270 (1054)
+|...++.+++++|++. | |+|+|++.....+ . .+.....|+.++.++..+...
T Consensus 14 ~~~~~R~~~~a~~L~~~-G-~~V~ii~~~~~~~---------~------------~~~~~~~~v~~~~~~~~~~~~---- 66 (415)
T cd03816 14 IGRSPRMQYHALSLAKH-G-WKVDLVGYLETPP---------H------------DEILSNPNITIHPLPPPPQRL---- 66 (415)
T ss_pred cCCCHHHHHHHHHHHhc-C-ceEEEEEecCCCC---------C------------HHHhcCCCEEEEECCCCcccc----
Confidence 46667779999999999 8 9999998642110 0 011123588888887653100
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCc---hHHHHHHHccCCCCEEEEeCCCccchHHHH
Q 001557 271 ELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA---GDAAALLSGALNVPMVFTGHSLGRDKLEQL 347 (1054)
Q Consensus 271 ~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a---~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l 347 (1054)
...+++..+...+......+.+.+.. ..+||+||+|.... ..++.++++..++|+|++.|+.+....
T Consensus 67 -~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~--- 136 (415)
T cd03816 67 -NKLPFLLFAPLKVLWQFFSLLWLLYK------LRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTIL--- 136 (415)
T ss_pred -ccchHHHHHHHHHHHHHHHHHHHHHh------cCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHH---
Confidence 00111111212222222222222222 14699999987432 334555666679999999998753211
Q ss_pred HHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEE
Q 001557 348 LKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVV 427 (1054)
Q Consensus 348 ~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~v 427 (1054)
..+. .. .....++.+++ |+..++.+|.||++|+...+.+.+ +. .+..++.|
T Consensus 137 -~~~~-~~--~~~~~~~~~~~--e~~~~~~ad~ii~vS~~~~~~l~~-~~----------------------~~~~ki~v 187 (415)
T cd03816 137 -ALKL-GE--NHPLVRLAKWY--EKLFGRLADYNLCVTKAMKEDLQQ-FN----------------------NWKIRATV 187 (415)
T ss_pred -hccc-CC--CCHHHHHHHHH--HHHHhhcCCEeeecCHHHHHHHHh-hh----------------------ccCCCeee
Confidence 1111 00 01112344443 777899999999999988776543 22 12238999
Q ss_pred eCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc---
Q 001557 428 IPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLR--- 504 (1054)
Q Consensus 428 IPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~--- 504 (1054)
||||. ...|.|........ ..........+............++.++++++||+.+.||++.+++|+..++...
T Consensus 188 I~Ng~-~~~f~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~ 264 (415)
T cd03816 188 LYDRP-PEQFRPLPLEEKHE--LFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATG 264 (415)
T ss_pred cCCCC-HHHceeCcHHHHHH--HHHhccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhccc
Confidence 99994 45666532110000 0000000000000000000011234567889999999999999999999986421
Q ss_pred -CCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecC---CCCC
Q 001557 505 -ELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPA---FIEP 579 (1054)
Q Consensus 505 -~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps---~~Eg 579 (1054)
..+++.| |+|+|+. ...+.++++++++.+.+.+.|+++.++++.+|+.| |++|.|+ ..|+
T Consensus 265 ~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~a----Dv~v~~~~~~~~~~ 329 (415)
T cd03816 265 PKLPKLLCIITGKGPL-----------KEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASA----DLGVSLHTSSSGLD 329 (415)
T ss_pred ccCCCEEEEEEecCcc-----------HHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhC----CEEEEccccccccC
Confidence 2356765 7798875 45677888899998777777899999999999999 9999753 3588
Q ss_pred CcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHhcCCHHH
Q 001557 580 FGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSD---KQLWERCRQNGLKNIHQFSWPE 655 (1054)
Q Consensus 580 fgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d---~~~~~~~~~~~~~~v~~fsw~~ 655 (1054)
||++++||||||+|||+++.||..|++.++.+|++++ |+++++++|.++++| ++++++|++++++.. .++|++
T Consensus 330 ~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~-~~~~~~ 405 (415)
T cd03816 330 LPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES-ELRWDE 405 (415)
T ss_pred CcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hcCHHH
Confidence 9999999999999999999999999999999999995 999999999999999 899999999999887 445543
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=292.07 Aligned_cols=367 Identities=19% Similarity=0.239 Sum_probs=266.4
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
++|++||.|.| |.+||.+.+++.|++.|-++ | |.|.++|-.+ |.....
T Consensus 1 ~~i~mVsdff~-----------P~~ggveshiy~lSq~li~l-g-hkVvvithay---------g~r~gi---------- 48 (426)
T KOG1111|consen 1 SRILMVSDFFY-----------PSTGGVESHIYALSQCLIRL-G-HKVVVITHAY---------GNRVGI---------- 48 (426)
T ss_pred CcceeeCcccc-----------cCCCChhhhHHHhhcchhhc-C-CeEEEEeccc---------cCccce----------
Confidence 47999999877 88999999999999999999 8 9999999653 332111
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHH--HHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDA--AAL 323 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~--a~~ 323 (1054)
..-.+|+.++.+|+.. ...+...|-+.+...- ++.+. +. .++.+||+|.+++.++ +.+
T Consensus 49 --rylt~glkVyylp~~v----~~n~tT~ptv~~~~Pl-lr~i~-----lr--------E~I~ivhghs~fS~lahe~l~ 108 (426)
T KOG1111|consen 49 --RYLTNGLKVYYLPAVV----GYNQTTFPTVFSDFPL-LRPIL-----LR--------ERIEIVHGHSPFSYLAHEALM 108 (426)
T ss_pred --eeecCCceEEEEeeee----eecccchhhhhccCcc-cchhh-----hh--------hceEEEecCChHHHHHHHHHH
Confidence 1123578888888732 1222233322221110 11111 11 3489999999765443 667
Q ss_pred HHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHH
Q 001557 324 LSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403 (1054)
Q Consensus 324 l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l 403 (1054)
.++.+|..+|||-|+++-.. .++....+ + .-...+...|.+||+|....+. .-+.....|
T Consensus 109 hartMGlktVfTdHSlfGfa--------d~~si~~n---~------ll~~sL~~id~~IcVshtsken-tvlr~~L~p-- 168 (426)
T KOG1111|consen 109 HARTMGLKTVFTDHSLFGFA--------DIGSILTN---K------LLPLSLANIDRIICVSHTSKEN-TVLRGALAP-- 168 (426)
T ss_pred HHHhcCceEEEecccccccc--------chhhhhhc---c------eeeeeecCCCcEEEEeecCCCc-eEEEeccCH--
Confidence 78889999999999974321 00111111 1 1234688999999998743322 112222233
Q ss_pred HHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeC
Q 001557 404 ERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALAR 483 (1054)
Q Consensus 404 ~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgR 483 (1054)
.++.+|||.++.+.|.|.++.. .+.+...|+.++|
T Consensus 169 -------------------~kvsvIPnAv~~~~f~P~~~~~--------------------------~S~~i~~ivv~sR 203 (426)
T KOG1111|consen 169 -------------------AKVSVIPNAVVTHTFTPDAADK--------------------------PSADIITIVVASR 203 (426)
T ss_pred -------------------hHeeeccceeeccccccCcccc--------------------------CCCCeeEEEEEee
Confidence 3899999999999999854321 0234478999999
Q ss_pred CCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHH
Q 001557 484 PDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYR 562 (1054)
Q Consensus 484 ld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~ 562 (1054)
|-++||++.+++++.++.. ..|++.+ |+|+||... .+++..+++.++.+|.++|.++.+++.+.|.
T Consensus 204 LvyrKGiDll~~iIp~vc~--~~p~vrfii~GDGPk~i-----------~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~ 270 (426)
T KOG1111|consen 204 LVYRKGIDLLLEIIPSVCD--KHPEVRFIIIGDGPKRI-----------DLEEMLEKLFLQDRVVMLGTVPHDRVRDVLV 270 (426)
T ss_pred eeeccchHHHHHHHHHHHh--cCCCeeEEEecCCcccc-----------hHHHHHHHhhccCceEEecccchHHHHHHHh
Confidence 9999999999999999964 4455654 779998643 4567888999999999999999999999999
Q ss_pred HhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001557 563 LAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQ 642 (1054)
Q Consensus 563 ~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 642 (1054)
.- |+|++||+.|.|++++.|||.||+|||+|..||.+|++.+. -+...+..++++++++++++..-... -.
T Consensus 271 ~G----~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~---p~ 341 (426)
T KOG1111|consen 271 RG----DIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTL---PL 341 (426)
T ss_pred cC----cEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccC---ch
Confidence 99 99999999999999999999999999999999999998643 34456678999999999998732211 23
Q ss_pred HHHHHH-hcCCHHHHHHHHHHHHHHhhhcC
Q 001557 643 NGLKNI-HQFSWPEHCKSYLSRISSCKQRQ 671 (1054)
Q Consensus 643 ~~~~~v-~~fsw~~~a~~yl~~l~~~~~~~ 671 (1054)
...+.+ +.|+|...|++-.+.|.++....
T Consensus 342 ~~h~~v~~~y~w~dVa~rTekvy~r~~~t~ 371 (426)
T KOG1111|consen 342 EFHDRVKKMYSWKDVAERTEKVYDRAATTS 371 (426)
T ss_pred hHHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence 334455 58999999999999999876543
|
|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-30 Score=296.71 Aligned_cols=332 Identities=20% Similarity=0.214 Sum_probs=233.4
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
|||++|+....+- + +|..||.++++.+|+++|.+. | |+|++++.......
T Consensus 1 MkI~~i~~~~~~~------~-~~~~GG~~~~~~~l~~~L~~~-g-~~V~v~~~~~~~~~--------------------- 50 (335)
T cd03802 1 MRIALVAPPREPV------P-PPAYGGTERVVAALTEGLVAR-G-HEVTLFASGDSKTA--------------------- 50 (335)
T ss_pred CeEEEEcCCcccC------C-CcccCcHHHHHHHHHHHHHhc-C-ceEEEEecCCCCcc---------------------
Confidence 8999999643210 0 256799999999999999999 8 99999996421100
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 325 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~ 325 (1054)
........... .... .. ...........+.+.+.+ .+|||||+|.+..... ++
T Consensus 51 --------~~~~~~~~~~~--~~~~---~~----~~~~~~~~~~~~~~~~~~-------~~~Divh~~~~~~~~~---~~ 103 (335)
T cd03802 51 --------APLVPVVPEPL--RLDA---PG----RDRAEAEALALAERALAA-------GDFDIVHNHSLHLPLP---FA 103 (335)
T ss_pred --------cceeeccCCCc--cccc---ch----hhHhhHHHHHHHHHHHhc-------CCCCEEEecCcccchh---hh
Confidence 00010000000 0000 00 000111111112222221 5699999998765544 56
Q ss_pred ccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 326 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
+..++|+|++.|+........ . .......+.++++|+...+.....
T Consensus 104 ~~~~~~~v~~~h~~~~~~~~~-----------------~-------~~~~~~~~~~~~~s~~~~~~~~~~---------- 149 (335)
T cd03802 104 RPLPVPVVTTLHGPPDPELLK-----------------L-------YYAARPDVPFVSISDAQRRPWPPL---------- 149 (335)
T ss_pred cccCCCEEEEecCCCCcccch-----------------H-------HHhhCcCCeEEEecHHHHhhcccc----------
Confidence 678999999999875432110 0 123567788999988665432111
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCC
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 485 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld 485 (1054)
.++.+||||+|.+.|.+. ...++.|+++||+.
T Consensus 150 -----------------~~~~vi~ngvd~~~~~~~-------------------------------~~~~~~i~~~Gr~~ 181 (335)
T cd03802 150 -----------------PWVATVHNGIDLDDYPFR-------------------------------GPKGDYLLFLGRIS 181 (335)
T ss_pred -----------------cccEEecCCcChhhCCCC-------------------------------CCCCCEEEEEEeec
Confidence 289999999999888641 13467899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcC-CCCCEEeCCCCCCCcHHHHHHHh
Q 001557 486 PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYD-LYGQVAYPKHHKQSDVPDIYRLA 564 (1054)
Q Consensus 486 ~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~-l~~~V~~~g~~~~~dl~~ly~~A 564 (1054)
+.||++.+++++... ...+ +++|.++..+. +........ +.++|.|+|+++.+++..+|+.|
T Consensus 182 ~~Kg~~~li~~~~~~-----~~~l-~i~G~~~~~~~-----------~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~ 244 (335)
T cd03802 182 PEKGPHLAIRAARRA-----GIPL-KLAGPVSDPDY-----------FYREIAPELLDGPDIEYLGEVGGAEKAELLGNA 244 (335)
T ss_pred cccCHHHHHHHHHhc-----CCeE-EEEeCCCCHHH-----------HHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 999999999998654 1233 47788764222 222233322 45789999999999999999999
Q ss_pred hcCCcEEEecCC-CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001557 565 AKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQN 643 (1054)
Q Consensus 565 a~~~dv~v~ps~-~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1054)
|++|+|+. .|+||++++||||||+|||+++.||..|++.++.+|+++++ +++++++|.+++..+ .++
T Consensus 245 ----d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~------~~~ 312 (335)
T cd03802 245 ----RALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLD------RAA 312 (335)
T ss_pred ----cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccH------HHH
Confidence 99999997 59999999999999999999999999999999889999985 999999999987643 235
Q ss_pred HHHHH-hcCCHHHHHHHHHHHHH
Q 001557 644 GLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 644 ~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
+++.+ ++|||+..+++|+++|+
T Consensus 313 ~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 313 CRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhC
Confidence 56666 79999999999999873
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-30 Score=298.51 Aligned_cols=352 Identities=22% Similarity=0.277 Sum_probs=254.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++|+.. + +|+.||.++++.+|+++|.+. | |+|+|++....... ..
T Consensus 1 kil~i~~~-~----------~p~~gG~~~~~~~l~~~L~~~-g-~~v~v~~~~~~~~~-------~~------------- 47 (357)
T cd03795 1 RVLHVGKF-Y----------PPDRGGIEQVIRDLAEGLAAR-G-IEVAVLCASPEPKG-------RD------------- 47 (357)
T ss_pred CeeEecCC-C----------CCCCCcHHHHHHHHHHHHHhC-C-CceEEEecCCCCcc-------hh-------------
Confidence 68899863 3 266899999999999999999 8 99999997532111 00
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHc
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 326 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~ 326 (1054)
....+..+.+++.... ....+....+ ...+. + ...+||+||+|+............
T Consensus 48 --~~~~~~~~~~~~~~~~------~~~~~~~~~~----~~~~~-----~-------~~~~~Dii~~~~~~~~~~~~~~~~ 103 (357)
T cd03795 48 --EERNGHRVIRAPSLLN------VASTPFSPSF----FKQLK-----K-------LAKKADVIHLHFPNPLADLALLLL 103 (357)
T ss_pred --hhccCceEEEeecccc------cccccccHHH----HHHHH-----h-------cCCCCCEEEEecCcchHHHHHHHh
Confidence 0113445666553211 0011111111 11110 1 125699999998644333222333
Q ss_pred cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHH
Q 001557 327 ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406 (1054)
Q Consensus 327 ~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 406 (1054)
..++|++++.|+...... ..+++.+. .++..++.+|.|+++|+...+.....+..
T Consensus 104 ~~~~~~i~~~h~~~~~~~---------------~~~~~~~~--~~~~~~~~~d~vi~~s~~~~~~~~~~~~~-------- 158 (357)
T cd03795 104 PRKKPVVVHWHSDIVKQK---------------LLLKLYRP--LQRRFLRRADAIVATSPNYAETSPVLRRF-------- 158 (357)
T ss_pred ccCceEEEEEcChhhccc---------------hhhhhhhH--HHHHHHHhcCEEEeCcHHHHHHHHHhcCC--------
Confidence 368999999997432110 01111122 24557899999999999877654333221
Q ss_pred HHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCC
Q 001557 407 LRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDP 486 (1054)
Q Consensus 407 l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~ 486 (1054)
..++.+||||+|...+.+..... ........+.+.|+++||+.+
T Consensus 159 ---------------~~~~~~i~~gi~~~~~~~~~~~~---------------------~~~~~~~~~~~~i~~~G~~~~ 202 (357)
T cd03795 159 ---------------RDKVRVIPLGLDPARYPRPDALE---------------------EAIWRRAAGRPFFLFVGRLVY 202 (357)
T ss_pred ---------------ccceEEecCCCChhhcCCcchhh---------------------hHhhcCCCCCcEEEEeccccc
Confidence 12899999999998776432100 011222456789999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001557 487 KKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 565 (1054)
Q Consensus 487 ~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa 565 (1054)
.||++.+++|+.++. ++.+ |+|+++. ...+.+++.++++..+|.|+|+++.+++..+|+.|
T Consensus 203 ~K~~~~li~a~~~l~------~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~a- 264 (357)
T cd03795 203 YKGLDVLLEAAAALP------DAPLVIVGEGPL-----------EAELEALAAALGLLDRVRFLGRLDDEEKAALLAAC- 264 (357)
T ss_pred ccCHHHHHHHHHhcc------CcEEEEEeCChh-----------HHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhC-
Confidence 999999999999984 4444 7787764 34566777788888999999999999999999999
Q ss_pred cCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCcccceee-CCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001557 566 KTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV-LDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQ 642 (1054)
Q Consensus 566 ~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~-~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 642 (1054)
|++++||. .|+||++++|||+||+|||+++.|+..+.+.. +.+|+++++.|+++++++|.+++++++.++++++
T Consensus 265 ---d~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~ 341 (357)
T cd03795 265 ---DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGE 341 (357)
T ss_pred ---CEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHH
Confidence 99999986 59999999999999999999999999998876 8899999999999999999999999999999999
Q ss_pred HHHHHH-hcCCHHHHH
Q 001557 643 NGLKNI-HQFSWPEHC 657 (1054)
Q Consensus 643 ~~~~~v-~~fsw~~~a 657 (1054)
++++.+ +.|||+.++
T Consensus 342 ~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 342 AARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHhcchHhhC
Confidence 999999 799998764
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-30 Score=297.20 Aligned_cols=385 Identities=21% Similarity=0.255 Sum_probs=271.2
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++|+.+.. |..||...++..++++|++. | |+|++++.....+....... .
T Consensus 1 kIl~i~~~~~-----------~~~~G~~~~~~~l~~~L~~~-g-~~v~~~~~~~~~~~~~~~~~---------------~ 52 (394)
T cd03794 1 KILILSQYFP-----------PELGGGAFRTTELAEELVKR-G-HEVTVITGSPNYPSGKIYKG---------------Y 52 (394)
T ss_pred CEEEEecccC-----------CccCCcceeHHHHHHHHHhC-C-ceEEEEecCCCccccccccc---------------c
Confidence 6899996433 45589999999999999999 8 99999997532221100000 0
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCC--CchHHHHHH
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA--DAGDAAALL 324 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~--~a~~~a~~l 324 (1054)
......++.+++++...... ... +..+ .....+.......+.. +..+||+||+|.+ .....+..+
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~----~~~---~~~~-~~~~~~~~~~~~~~~~-----~~~~~D~v~~~~~~~~~~~~~~~~ 119 (394)
T cd03794 53 KREEVDGVRVHRVPLPPYKK----NGL---LKRL-LNYLSFALSALLALLK-----RRRRPDVIIATSPPLLIALAALLL 119 (394)
T ss_pred eEEecCCeEEEEEecCCCCc----cch---HHHH-HhhhHHHHHHHHHHHh-----cccCCCEEEEcCChHHHHHHHHHH
Confidence 00123578888877654311 000 0010 0111111111222211 1256999999973 345556666
Q ss_pred HccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHH
Q 001557 325 SGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1054)
Q Consensus 325 ~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~ 404 (1054)
++..++|+|++.|++++....... ...... ..+++.+++ ++..++.+|.|+++|+...+.+. .+.
T Consensus 120 ~~~~~~~~i~~~h~~~~~~~~~~~---~~~~~~--~~~~~~~~~--~~~~~~~~d~vi~~s~~~~~~~~-~~~------- 184 (394)
T cd03794 120 ARLKGAPFVLEVRDLWPESAVALG---LLKNGS--LLYRLLRKL--ERLIYRRADAIVVISPGMREYLV-RRG------- 184 (394)
T ss_pred HHhcCCCEEEEehhhcchhHHHcc---Cccccc--hHHHHHHHH--HHHHHhcCCEEEEECHHHHHHHH-hcC-------
Confidence 777799999999998765543221 111110 111333333 67789999999999998877653 111
Q ss_pred HHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCC
Q 001557 405 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 484 (1054)
Q Consensus 405 ~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl 484 (1054)
.+..++.++|||++...+.+..... . ........+++.|+++|++
T Consensus 185 ---------------~~~~~~~~i~~~~~~~~~~~~~~~~-----------------~---~~~~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 185 ---------------VPPEKISVIPNGVDLELFKPPPADE-----------------S---LRKELGLDDKFVVLYAGNI 229 (394)
T ss_pred ---------------CCcCceEEcCCCCCHHHcCCccchh-----------------h---hhhccCCCCcEEEEEecCc
Confidence 1223899999999988776432110 0 1222234667889999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 001557 485 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 563 (1054)
Q Consensus 485 d~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~ 563 (1054)
.+.||++.+++|+..+.+. +++.+ ++|.++.. ..+.+.+...++ ++|.|.|+++.+++..+|+.
T Consensus 230 ~~~k~~~~l~~~~~~l~~~---~~~~l~i~G~~~~~-----------~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ 294 (394)
T cd03794 230 GRAQGLDTLLEAAALLKDR---PDIRFLIVGDGPEK-----------EELKELAKALGL-DNVTFLGRVPKEELPELLAA 294 (394)
T ss_pred ccccCHHHHHHHHHHHhhc---CCeEEEEeCCcccH-----------HHHHHHHHHcCC-CcEEEeCCCChHHHHHHHHh
Confidence 9999999999999999643 45555 67877653 334444555554 57999999999999999999
Q ss_pred hhcCCcEEEecCCCCCC-----cHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHH
Q 001557 564 AAKTKGVFINPAFIEPF-----GLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWE 638 (1054)
Q Consensus 564 Aa~~~dv~v~ps~~Egf-----gl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~ 638 (1054)
| |++|+|+..|++ |++++|||+||+|||+++.|+..+++.++.+|+++++.|+++++++|.+++.+++.++
T Consensus 295 ~----di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~ 370 (394)
T cd03794 295 A----DVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERA 370 (394)
T ss_pred h----CeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChHHHH
Confidence 9 999999998875 8889999999999999999999999988889999999999999999999999999999
Q ss_pred HHHHHHHHHH-hcCCHHHHHHHHH
Q 001557 639 RCRQNGLKNI-HQFSWPEHCKSYL 661 (1054)
Q Consensus 639 ~~~~~~~~~v-~~fsw~~~a~~yl 661 (1054)
++++++++.+ ++|||+.++++|+
T Consensus 371 ~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 371 EMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHhhcHHHHHHhcC
Confidence 9999999999 5999999998873
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-31 Score=299.07 Aligned_cols=361 Identities=23% Similarity=0.293 Sum_probs=258.9
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++|+.... |..||...++..|+++|.+. | |+|++++.....+...
T Consensus 1 kIl~i~~~~~-----------p~~~G~~~~~~~l~~~L~~~-g-~~v~~~~~~~~~~~~~-------------------- 47 (364)
T cd03814 1 RIAIVTDTFL-----------PQVNGVVRTLQRLVEHLRAR-G-HEVLVIAPGPFRESEG-------------------- 47 (364)
T ss_pred CeEEEecccC-----------ccccceehHHHHHHHHHHHC-C-CEEEEEeCCchhhccC--------------------
Confidence 6899986332 56699999999999999999 8 9999999753211100
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCC-CchHHHHHHH
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA-DAGDAAALLS 325 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~-~a~~~a~~l~ 325 (1054)
......+..++...... . ...... ...+.+.+. ..+||+||+|.. ..+..+..++
T Consensus 48 ---~~~~~~~~~~~~~~~~~-~--~~~~~~-----------~~~~~~~~~-------~~~pdii~~~~~~~~~~~~~~~~ 103 (364)
T cd03814 48 ---PARVVPVPSVPLPGYPE-I--RLALPP-----------RRRVRRLLD-------AFAPDVVHIATPGPLGLAALRAA 103 (364)
T ss_pred ---CCCceeecccccCcccc-e--Eecccc-----------hhhHHHHHH-------hcCCCEEEEeccchhhHHHHHHH
Confidence 00122222222211100 0 000000 001111111 156999999875 3455666777
Q ss_pred ccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 326 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
+..++|++++.|+.+........ .. ....+.. ..++..++.+|.+++.|+...+.+...+
T Consensus 104 ~~~~~~~i~~~~~~~~~~~~~~~-----~~----~~~~~~~--~~~~~~~~~~d~i~~~s~~~~~~~~~~~--------- 163 (364)
T cd03814 104 RRLGIPVVTSYHTDFPEYLRYYG-----LG----PLSWLAW--AYLRWFHNRADRVLVPSPSLADELRARG--------- 163 (364)
T ss_pred HHcCCCEEEEEecChHHHhhhcc-----cc----hHhHhhH--HHHHHHHHhCCEEEeCCHHHHHHHhccC---------
Confidence 78899999999987553321110 00 0111111 1245568899999999998766332211
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCC
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 485 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld 485 (1054)
.+++.++|+|+|...|.+..... .....+. .++++.|+++|++.
T Consensus 164 ----------------~~~~~~~~~g~~~~~~~~~~~~~-------------------~~~~~~~-~~~~~~i~~~G~~~ 207 (364)
T cd03814 164 ----------------FRRVRLWPRGVDTELFHPRRRDE-------------------ALRARLG-PPDRPVLLYVGRLA 207 (364)
T ss_pred ----------------CCceeecCCCccccccCcccccH-------------------HHHHHhC-CCCCeEEEEEeccc
Confidence 12789999999998886532110 1111222 35678899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001557 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 564 (1054)
Q Consensus 486 ~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A 564 (1054)
+.||++.+++++..+... +++.+ ++|.+++.+. +. +...+|.|.|+++.+++..+|+.|
T Consensus 208 ~~k~~~~~i~~~~~l~~~---~~~~l~i~G~~~~~~~-----------~~------~~~~~v~~~g~~~~~~~~~~~~~~ 267 (364)
T cd03814 208 PEKNLEALLDADLPLRRR---PPVRLVIVGDGPARAR-----------LE------ARYPNVHFLGFLDGEELAAAYASA 267 (364)
T ss_pred cccCHHHHHHHHHHhhhc---CCceEEEEeCCchHHH-----------Hh------ccCCcEEEEeccCHHHHHHHHHhC
Confidence 999999999999999653 45554 7787764221 11 445789999999999999999999
Q ss_pred hcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001557 565 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNG 644 (1054)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 644 (1054)
|++|+|+..|+||++++||||||+|||+++.|+..+++.++.+|+++++.|.++++++|.+++.+++.+.++.+++
T Consensus 268 ----d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~ 343 (364)
T cd03814 268 ----DVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARA 343 (364)
T ss_pred ----CEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999899999999999999999999999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHH
Q 001557 645 LKNIHQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 645 ~~~v~~fsw~~~a~~yl~~l 664 (1054)
++.++.|+|+.++++++++|
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 344 RAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHhhcCHHHHHHHHHHhh
Confidence 99998999999999999887
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-30 Score=297.68 Aligned_cols=286 Identities=24% Similarity=0.272 Sum_probs=218.3
Q ss_pred CcceEEEEcCC--CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEE
Q 001557 305 IWPVAIHGHYA--DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVI 382 (1054)
Q Consensus 305 ~~pDVIh~h~~--~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi 382 (1054)
.+||+||+|.. .....+..+++..++|+|++.|+....... . . ....+.......+...+..++.++
T Consensus 86 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~-----~---~~~~~~~~~~~~~~~~~~~~~~i~ 154 (375)
T cd03821 86 READIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWAL---P-----H---KALKKRLAWFLFERRLLQAAAAVH 154 (375)
T ss_pred CCCCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccc---c-----c---chhhhHHHHHHHHHHHHhcCCEEE
Confidence 46999999973 334455556667899999999987443311 0 0 001111122223556788999999
Q ss_pred ecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
+++..........+. ..++.+||||+|.+.|.+.....
T Consensus 155 ~~s~~~~~~~~~~~~------------------------~~~~~vi~~~~~~~~~~~~~~~~------------------ 192 (375)
T cd03821 155 ATSEQEAAEIRRLGL------------------------KAPIAVIPNGVDIPPFAALPSRG------------------ 192 (375)
T ss_pred ECCHHHHHHHHhhCC------------------------cccEEEcCCCcChhccCcchhhh------------------
Confidence 999766554432211 12899999999998886432110
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcC
Q 001557 463 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYD 541 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~ 541 (1054)
....+....++++|+++||+.+.||++.+++|+..+... .+++.+ ++|.++.. ....+..++.+++
T Consensus 193 --~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~~~l~i~G~~~~~---------~~~~~~~~~~~~~ 259 (375)
T cd03821 193 --RRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAER--FPDWHLVIAGPDEGG---------YRAELKQIAAALG 259 (375)
T ss_pred --hhhhccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhh--cCCeEEEEECCCCcc---------hHHHHHHHHHhcC
Confidence 012233346788999999999999999999999999643 345554 67775431 1234445568889
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHH
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ 621 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~ 621 (1054)
+.++|.|+|+++.+++..+|+.| |++|+||..|+||++++||||||+|||+++.||..+++.+ ..|+++++ +.+
T Consensus 260 ~~~~v~~~g~~~~~~~~~~~~~a----dv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~ 333 (375)
T cd03821 260 LEDRVTFTGMLYGEDKAAALADA----DLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVD 333 (375)
T ss_pred ccceEEEcCCCChHHHHHHHhhC----CEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChH
Confidence 98999999999999999999999 9999999999999999999999999999999999999987 78888864 669
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHH
Q 001557 622 SIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLS 662 (1054)
Q Consensus 622 ~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~ 662 (1054)
+++++|.+++++++.++++++++++.+ ++|+|+..+++|++
T Consensus 334 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 334 ALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhhC
Confidence 999999999999999999999999997 79999999998863
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-30 Score=297.03 Aligned_cols=268 Identities=22% Similarity=0.310 Sum_probs=218.6
Q ss_pred CcceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||+|+. ....++.+.++..++|++++.|+....... . . ..++..++.+|.|++
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~------~-------~~~~~~~~~~~~vi~ 136 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSP--------D------A-------IDLDEKLARADFVVA 136 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccC--------c------h-------HHHHHHHhhCCEEEE
Confidence 56999999986 444555555656689999999964321100 0 0 123456889999999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
+|+...+.+...+.. ...++.++|||+|.+.|.+..
T Consensus 137 ~s~~~~~~l~~~~~~----------------------~~~~~~vi~~~~d~~~~~~~~---------------------- 172 (355)
T cd03799 137 ISEYNRQQLIRLLGC----------------------DPDKIHVVHCGVDLERFPPRP---------------------- 172 (355)
T ss_pred CCHHHHHHHHHhcCC----------------------CcccEEEEeCCcCHHHcCCcc----------------------
Confidence 999888876655421 123899999999988776421
Q ss_pred HHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 464 SEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
.....+++.|+++|++.+.||++.+++++..+... .+++.+ ++|.++. ...+...+.++++
T Consensus 173 -----~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~ 234 (355)
T cd03799 173 -----PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKDR--GIDFRLDIVGDGPL-----------RDELEALIAELGL 234 (355)
T ss_pred -----ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhhc--CCCeEEEEEECCcc-----------HHHHHHHHHHcCC
Confidence 00124567899999999999999999999998643 356665 7788765 3456677788888
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCC------CCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeC
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFI------EPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVD 616 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~------Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~ 616 (1054)
.++|.|.|+++.+++..+|+.| |++|+|+.. |+||++++||||||+|||+++.|+..+++.++.+|++++
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~a----di~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~ 310 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAA----DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVP 310 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhC----CEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeC
Confidence 8999999999999999999999 999999998 999999999999999999999999999999988999999
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHH
Q 001557 617 PHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKS 659 (1054)
Q Consensus 617 p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~ 659 (1054)
+.|+++++++|.+++++++.+.++++++++.+ +.|||+..+++
T Consensus 311 ~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 311 PGDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 99999999999999999999999999999999 69999998865
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.2e-30 Score=292.57 Aligned_cols=371 Identities=25% Similarity=0.346 Sum_probs=261.9
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++++.. + +|..||...++.+++++|++. | |+|++++..........
T Consensus 1 kil~~~~~-~----------~p~~~G~~~~~~~l~~~L~~~-g-~~v~v~~~~~~~~~~~~------------------- 48 (374)
T cd03817 1 KIGIFTDT-Y----------LPQVNGVATSIRRLAEELEKR-G-HEVYVVAPSYPGAPEEE------------------- 48 (374)
T ss_pred CeeEeehh-c----------cCCCCCeehHHHHHHHHHHHc-C-CeEEEEeCCCCCCCccc-------------------
Confidence 58888863 3 378899999999999999999 8 99999997532111000
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCC-CchHHHHHHH
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA-DAGDAAALLS 325 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~-~a~~~a~~l~ 325 (1054)
...+......+.. .+ ....+.. .+... +.+.+. ..+||+||+|.. ..+..+..++
T Consensus 49 ---~~~~~~~~~~~~~---~~--~~~~~~~--~~~~~-------~~~~~~-------~~~~Div~~~~~~~~~~~~~~~~ 104 (374)
T cd03817 49 ---EVVVVRPFRVPTF---KY--PDFRLPL--PIPRA-------LIIILK-------ELGPDIVHTHTPFSLGLLGLRVA 104 (374)
T ss_pred ---ccccccccccccc---hh--hhhhccc--cHHHH-------HHHHHh-------hcCCCEEEECCchhhhhHHHHHH
Confidence 0001111111000 00 0000100 01011 111111 156999999985 3456667778
Q ss_pred ccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 326 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
+..++|+|++.|+.......... .+... ......+ ..++..+..+|.|++.|+...+.+.. +..
T Consensus 105 ~~~~~~~i~~~~~~~~~~~~~~~-~~~~~------~~~~~~~-~~~~~~~~~~d~i~~~s~~~~~~~~~-~~~------- 168 (374)
T cd03817 105 RKLGIPVVATYHTMYEDYTHYVP-LGRLL------ARAVVRR-KLSRRFYNRCDAVIAPSEKIADLLRE-YGV------- 168 (374)
T ss_pred HHcCCCEEEEecCCHHHHHHHHh-cccch------hHHHHHH-HHHHHHhhhCCEEEeccHHHHHHHHh-cCC-------
Confidence 88899999999987653322221 11100 0011110 24667899999999999976655432 211
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCC
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 485 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld 485 (1054)
. .++.++|+|+|...|.+.... ..+..+...++.+.|+++|++.
T Consensus 169 ---------------~-~~~~vi~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~i~~~G~~~ 212 (374)
T cd03817 169 ---------------K-RPIEVIPTGIDLDRFEPVDGD--------------------DERRKLGIPEDEPVLLYVGRLA 212 (374)
T ss_pred ---------------C-CceEEcCCccchhccCccchh--------------------HHHHhcCCCCCCeEEEEEeeee
Confidence 1 168999999999887643211 0122233346678899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001557 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 564 (1054)
Q Consensus 486 ~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A 564 (1054)
+.||++.+++++..+... .+++.+ ++|+++. ...+..++.++++.++|.|+|+++.+++..+|+.|
T Consensus 213 ~~k~~~~l~~~~~~~~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 279 (374)
T cd03817 213 KEKNIDFLIRAFARLLKE--EPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTGFVPREELPDYYKAA 279 (374)
T ss_pred cccCHHHHHHHHHHHHHh--CCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHc
Confidence 999999999999998643 345665 6677653 34566778888888999999999999999999999
Q ss_pred hcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001557 565 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNG 644 (1054)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 644 (1054)
|++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|+++++.+. +++++|.+++++++.++++++++
T Consensus 280 ----d~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~~ 354 (374)
T cd03817 280 ----DLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPELRRRLSKNA 354 (374)
T ss_pred ----CEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888 99999999999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHH
Q 001557 645 LKNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 645 ~~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
++.+++++ +++.+.++|++
T Consensus 355 ~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 355 EESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHH---HHHHHHHHHhc
Confidence 99997665 55566665543
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-30 Score=305.83 Aligned_cols=284 Identities=19% Similarity=0.190 Sum_probs=206.4
Q ss_pred CcceEEEEcCCCchHHHHHHH-ccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHH--HHHHHHHHhhhccCCEE
Q 001557 305 IWPVAIHGHYADAGDAAALLS-GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKI--MRRIEAEELSLDASEIV 381 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~-~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~--~~ri~~E~~~l~~ad~V 381 (1054)
.++|+||+++...+ .++. ...++|+|++.|++....+.++......... ..|++ ......|+.+++.+|.|
T Consensus 103 ~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~e~~~~~~ad~v 176 (397)
T TIGR03087 103 EPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLR---WIYRREGRLLLAYERAIAARFDAA 176 (397)
T ss_pred CCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcchh---HHHHHHHHHHHHHHHHHHhhCCeE
Confidence 45999999975322 2222 3458999999999865554443322221111 11211 11123488899999999
Q ss_pred EecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCc
Q 001557 382 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPP 461 (1054)
Q Consensus 382 i~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1054)
+++|+.+.+.+.+.+.. ...++.+||||+|.+.|.+.....
T Consensus 177 i~~S~~~~~~l~~~~~~----------------------~~~~v~vipngvd~~~f~~~~~~~----------------- 217 (397)
T TIGR03087 177 TFVSRAEAELFRRLAPE----------------------AAGRITAFPNGVDADFFSPDRDYP----------------- 217 (397)
T ss_pred EEcCHHHHHHHHHhCCC----------------------CCCCeEEeecccchhhcCCCcccc-----------------
Confidence 99999888766543321 112799999999999887532110
Q ss_pred hhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHH----HHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHH
Q 001557 462 IWSEIMHFFSNPRKPMILALARPDPKKNITTLVK----AFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKL 536 (1054)
Q Consensus 462 ~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~----A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l 536 (1054)
.. ..+++++|+|+||+++.||++.++. ++..+.+ ..+++.+ |+|+++. ..
T Consensus 218 -----~~--~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~--~~p~~~l~ivG~g~~------------~~---- 272 (397)
T TIGR03087 218 -----NP--YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRA--RRPAAEFYIVGAKPS------------PA---- 272 (397)
T ss_pred -----CC--CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHH--HCCCcEEEEECCCCh------------HH----
Confidence 00 0245689999999999999999884 4555543 2345554 7788763 11
Q ss_pred HHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC-CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEe
Q 001557 537 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV 615 (1054)
Q Consensus 537 ~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~-~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv 615 (1054)
+.++...++|.|.|+++ ++..+|+.| |++|+|+. .||+|++++||||||+|||+|+.|+. .+....++|+++
T Consensus 273 ~~~l~~~~~V~~~G~v~--~~~~~~~~a----dv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv 345 (397)
T TIGR03087 273 VRALAALPGVTVTGSVA--DVRPYLAHA----AVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLV 345 (397)
T ss_pred HHHhccCCCeEEeeecC--CHHHHHHhC----CEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEe
Confidence 22333456799999985 799999999 99999996 69999999999999999999997542 333344679999
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHH
Q 001557 616 DPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~ 666 (1054)
. .|+++++++|.++++|++.++++++++++.+ ++|||+.++++|.++|..
T Consensus 346 ~-~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~~ 396 (397)
T TIGR03087 346 A-ADPADFAAAILALLANPAEREELGQAARRRVLQHYHWPRNLARLDALLEQ 396 (397)
T ss_pred C-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcC
Confidence 6 8999999999999999999999999999999 699999999999998864
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-30 Score=296.35 Aligned_cols=344 Identities=19% Similarity=0.194 Sum_probs=245.5
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++++.. + ..||..+++.+++++|++. | |+|++++...... ...
T Consensus 1 kIl~~~~~-~------------~~GG~~~~~~~l~~~L~~~-~-~~v~~i~~~~~~~-------~~~------------- 45 (358)
T cd03812 1 KILHIVGT-M------------NRGGIETFIMNYYRNLDRS-K-IQFDFLVTSKEEG-------DYD------------- 45 (358)
T ss_pred CEEEEeCC-C------------CCccHHHHHHHHHHhcCcc-c-eEEEEEEeCCCCc-------chH-------------
Confidence 58888752 1 3599999999999999988 8 9999999642110 000
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHc
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 326 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~ 326 (1054)
......++.+.+++.... ....+ +..+.+.+.. .+|||||+|....+.++..+++
T Consensus 46 ~~~~~~~~~~~~~~~~~~-----------~~~~~-------~~~~~~~~~~-------~~~Dvv~~~~~~~~~~~~~~~~ 100 (358)
T cd03812 46 DEIEKLGGKIYYIPARKK-----------NPLKY-------FKKLYKLIKK-------NKYDIVHVHGSSASGFILLAAK 100 (358)
T ss_pred HHHHHcCCeEEEecCCCc-----------cHHHH-------HHHHHHHHhc-------CCCCEEEEeCcchhHHHHHHHh
Confidence 001123666666443211 01111 1112222221 5699999999766666666666
Q ss_pred cCCCCE-EEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 327 ALNVPM-VFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 327 ~~~iP~-V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
..+.|. +++.|+....... .. ..... ...+...++.++.++++|+...+.+... ..
T Consensus 101 ~~~~~~~v~~~~~~~~~~~~--------~~----~~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~---~~----- 157 (358)
T cd03812 101 KAGVKVRIAHSHNTSDSHDK--------KK----KILKY---KVLRKLINRLATDYLACSEEAGKWLFGK---VK----- 157 (358)
T ss_pred hCCCCeEEEEeccccccccc--------cc----hhhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhC---CC-----
Confidence 677776 6688876443210 00 00000 1124457888999999999877665433 11
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCC
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 485 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld 485 (1054)
..++.+||||+|...|.+.... ..........++++.|+++||+.
T Consensus 158 ----------------~~~~~vi~ngvd~~~~~~~~~~-------------------~~~~~~~~~~~~~~~i~~vGr~~ 202 (358)
T cd03812 158 ----------------NKKFKVIPNGIDLEKFIFNEEI-------------------RKKRRELGILEDKFVIGHVGRFS 202 (358)
T ss_pred ----------------cccEEEEeccCcHHHcCCCchh-------------------hhHHHHcCCCCCCEEEEEEeccc
Confidence 1289999999999887643211 01122333456788999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001557 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 564 (1054)
Q Consensus 486 ~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A 564 (1054)
+.||++.+++|+..+.+.. +++.+ |+|+++. ...+.+.++++++.++|.|+|+ .+++..+|+.|
T Consensus 203 ~~Kg~~~li~a~~~l~~~~--~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a 267 (358)
T cd03812 203 EQKNHEFLIEIFAELLKKN--PNAKLLLVGDGEL-----------EEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAM 267 (358)
T ss_pred cccChHHHHHHHHHHHHhC--CCeEEEEEeCCch-----------HHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhc
Confidence 9999999999999996433 45554 7788774 3456777888999999999998 78999999999
Q ss_pred hcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001557 565 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNG 644 (1054)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 644 (1054)
|++|+||..|+||++++||||+|+|||+|+.||..+++.+ ..|++..+.++++++++|.+++++|+..+.+...+
T Consensus 268 ----di~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~ 342 (358)
T cd03812 268 ----DVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIK 342 (358)
T ss_pred ----CEEEecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhh
Confidence 9999999999999999999999999999999999999988 56677767789999999999999999888777776
Q ss_pred HHHH
Q 001557 645 LKNI 648 (1054)
Q Consensus 645 ~~~v 648 (1054)
....
T Consensus 343 ~~~~ 346 (358)
T cd03812 343 KKGL 346 (358)
T ss_pred hccc
Confidence 6654
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-30 Score=299.52 Aligned_cols=267 Identities=17% Similarity=0.177 Sum_probs=203.7
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCC--EEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEE
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVP--MVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVI 382 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP--~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi 382 (1054)
.+||+||+|...+..++..+++..++| ++.+.|....... .+. . ..+..+|.++
T Consensus 83 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~----------------~~~-~-------~~~~~~d~~i 138 (359)
T PRK09922 83 TQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKK----------------HAE-C-------KKITCADYHL 138 (359)
T ss_pred cCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccc----------------hhh-h-------hhhhcCCEEE
Confidence 569999999876556666666655655 4666674321110 000 0 1146899999
Q ss_pred ecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
++|+...+.+.. + +..+ .++.+||||+|.+.+....+.
T Consensus 139 ~~S~~~~~~~~~-~-~~~~---------------------~ki~vi~N~id~~~~~~~~~~------------------- 176 (359)
T PRK09922 139 AISSGIKEQMMA-R-GISA---------------------QRISVIYNPVEIKTIIIPPPE------------------- 176 (359)
T ss_pred EcCHHHHHHHHH-c-CCCH---------------------HHEEEEcCCCCHHHccCCCcc-------------------
Confidence 999987766543 2 1222 289999999997654311100
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHH
Q 001557 463 WSEIMHFFSNPRKPMILALARPD--PKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDK 539 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~ 539 (1054)
..++++|+++||+. ..||+..+++|+..+. + ++.+ ++|++++ ...+.+++++
T Consensus 177 ---------~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~--~~~l~ivG~g~~-----------~~~l~~~~~~ 231 (359)
T PRK09922 177 ---------RDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---G--EWQLHIIGDGSD-----------FEKCKAYSRE 231 (359)
T ss_pred ---------cCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---C--CeEEEEEeCCcc-----------HHHHHHHHHH
Confidence 13467899999986 4699999999999873 2 4444 7888875 3457788899
Q ss_pred cCCCCCEEeCCCCCC--CcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc-ccCcccceeeCCceEEeC
Q 001557 540 YDLYGQVAYPKHHKQ--SDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-NGGPVDIHRVLDNGLLVD 616 (1054)
Q Consensus 540 ~~l~~~V~~~g~~~~--~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~-~Gg~~eiv~~~~~Gllv~ 616 (1054)
+++.++|.|+|+++. ++++.+|+.| |++|+||..||||++++||||||+|||+++ .||+.|+|.++.+|++++
T Consensus 232 ~~l~~~v~f~G~~~~~~~~~~~~~~~~----d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~ 307 (359)
T PRK09922 232 LGIEQRIIWHGWQSQPWEVVQQKIKNV----SALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYT 307 (359)
T ss_pred cCCCCeEEEecccCCcHHHHHHHHhcC----cEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEEC
Confidence 999999999998754 6889999999 999999999999999999999999999999 899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 001557 617 PHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCK 668 (1054)
Q Consensus 617 p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~ 668 (1054)
|+|+++++++|.+++++++.+ ......+.+.+|+-+..++++...|..+.
T Consensus 308 ~~d~~~la~~i~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (359)
T PRK09922 308 PGNIDEFVGKLNKVISGEVKY--QHDAIPNSIERFYEVLYFKNLNNALFSKL 357 (359)
T ss_pred CCCHHHHHHHHHHHHhCcccC--CHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 999999999999999998754 22333334478899999999999998765
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-29 Score=287.39 Aligned_cols=289 Identities=27% Similarity=0.365 Sum_probs=229.3
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+||+||++.+.........++..++|++++.|+......... ......+ ....+...++.+|.+++.
T Consensus 84 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~----------~~~~~~~--~~~~~~~~~~~~d~~i~~ 151 (374)
T cd03801 84 ERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPGNE----------LGLLLKL--ARALERRALRRADRIIAV 151 (374)
T ss_pred cCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhccccc----------hhHHHHH--HHHHHHHHHHhCCEEEEe
Confidence 4699999999766555546677789999999999765432110 0001111 111355678999999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+...+... ..++.++|||+|...+.+.. ..
T Consensus 152 s~~~~~~~~~~~~~~----------------------~~~~~~i~~~~~~~~~~~~~---------------------~~ 188 (374)
T cd03801 152 SEATREELRELGGVP----------------------PEKITVIPNGVDTERFRPAP---------------------RA 188 (374)
T ss_pred cHHHHHHHHhcCCCC----------------------CCcEEEecCcccccccCccc---------------------hH
Confidence 998887765554321 12899999999998775321 00
Q ss_pred HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCC
Q 001557 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~ 543 (1054)
.........+.+.|+++|++.+.||++.+++|+..+.... +++.+ ++|+++. ...+..++.+++..
T Consensus 189 ~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~--~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~ 255 (374)
T cd03801 189 ARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEY--PDVRLVIVGDGPL-----------REELEALAAELGLG 255 (374)
T ss_pred HHhhcCCcCCCeEEEEecchhhhcCHHHHHHHHHHHhhhc--CCeEEEEEeCcHH-----------HHHHHHHHHHhCCC
Confidence 1111222356789999999999999999999999986433 55665 6675543 45566677788888
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHH
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSI 623 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~l 623 (1054)
.+|.+.|+++.+++..+|+.| |++|+|+..|++|++++|||++|+|||+++.++..+++.++.+|+++++.|++++
T Consensus 256 ~~v~~~g~~~~~~~~~~~~~~----di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l 331 (374)
T cd03801 256 DRVTFLGFVPDEDLPALYAAA----DVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEAL 331 (374)
T ss_pred cceEEEeccChhhHHHHHHhc----CEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHH
Confidence 999999999999999999999 9999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 624 ADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 624 a~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
+++|.+++++++.+.++++++++.+ +.|+|+.+++++.++|+
T Consensus 332 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 332 AEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 9999999999999999999999777 79999999999998763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-30 Score=296.07 Aligned_cols=345 Identities=23% Similarity=0.216 Sum_probs=245.3
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
|||++++.. +..||.++++..++++|.++ | |+|++++...
T Consensus 1 MkIl~~~~~-------------~~~gG~~~~~~~l~~~l~~~-G-~~v~v~~~~~------------------------- 40 (365)
T cd03825 1 MKVLHLNTS-------------DISGGAARAAYRLHRALQAA-G-VDSTMLVQEK------------------------- 40 (365)
T ss_pred CeEEEEecC-------------CCCCcHHHHHHHHHHHHHhc-C-CceeEEEeec-------------------------
Confidence 899999852 23489999999999999999 8 9999998531
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 325 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~ 325 (1054)
. . + ...+ ...+|||||+|+...+.+.....
T Consensus 41 -------~----------~--------~-----------~~~~--------------~~~~~diih~~~~~~~~~~~~~~ 70 (365)
T cd03825 41 -------K----------A--------L-----------ISKI--------------EIINADIVHLHWIHGGFLSIEDL 70 (365)
T ss_pred -------c----------h--------h-----------hhCh--------------hcccCCEEEEEccccCccCHHHH
Confidence 0 0 0 0000 11569999999865444333333
Q ss_pred cc--CCCCEEEEeCCCccchHHHHHH--------hCC---CC--hhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHH
Q 001557 326 GA--LNVPMVFTGHSLGRDKLEQLLK--------QGR---LS--RDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIE 390 (1054)
Q Consensus 326 ~~--~~iP~V~t~H~l~~~~~~~l~~--------~g~---~~--~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~ 390 (1054)
.. .++|+|+|.|+.+......... .+. .. ...........++. .......++.++++|+...+
T Consensus 71 ~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~s~~~~~ 148 (365)
T cd03825 71 SKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRK--RKAWADLNLTIVAPSRWLAD 148 (365)
T ss_pred HHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHH--HHHhccCCcEEEehhHHHHH
Confidence 23 3999999999875432110000 000 00 00000011111111 11123567788888886655
Q ss_pred HHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhc
Q 001557 391 EQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFF 470 (1054)
Q Consensus 391 ~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (1054)
.....+. + ...++.++|||+|.+.|.+... ......+.
T Consensus 149 ~~~~~~~-~---------------------~~~~~~vi~ngi~~~~~~~~~~--------------------~~~~~~~~ 186 (365)
T cd03825 149 CARSSSL-F---------------------KGIPIEVIPNGIDTTIFRPRDK--------------------REARKRLG 186 (365)
T ss_pred HHHhccc-c---------------------CCCceEEeCCCCcccccCCCcH--------------------HHHHHHhC
Confidence 5433321 1 1138999999999988764321 11123333
Q ss_pred CCCCCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEE
Q 001557 471 SNPRKPMILALARPDP--KKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVA 547 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~ 547 (1054)
.+++.+++++.|+... .||++.+++|+..+... ..+++.+ ++|+++... ..++..+|.
T Consensus 187 ~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~-~~~~~~~~i~G~~~~~~------------------~~~~~~~v~ 247 (365)
T cd03825 187 LPADKKIILFGAVGGTDPRKGFDELIEALKRLAER-WKDDIELVVFGASDPEI------------------PPDLPFPVH 247 (365)
T ss_pred CCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhc-cCCCeEEEEeCCCchhh------------------hccCCCceE
Confidence 4556677777777765 89999999999988542 2356665 667665311 014456899
Q ss_pred eCCCCC-CCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHH
Q 001557 548 YPKHHK-QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADA 626 (1054)
Q Consensus 548 ~~g~~~-~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~a 626 (1054)
|+|+++ .+++..+|+.| |++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++
T Consensus 248 ~~g~~~~~~~~~~~~~~a----d~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 323 (365)
T cd03825 248 YLGSLNDDESLALIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEG 323 (365)
T ss_pred ecCCcCCHHHHHHHHHhC----CEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHH
Confidence 999998 77899999999 9999999999999999999999999999999999999998889999999999999999
Q ss_pred HHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 627 LLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 627 I~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
|.+++.+++.+.++++++++.+ +.|||+.++++|+++|+++
T Consensus 324 l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 324 IEWLLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999999999999999999998 6899999999999999863
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.4e-30 Score=294.99 Aligned_cols=282 Identities=25% Similarity=0.386 Sum_probs=217.9
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+||+||+++...... +..++|+|+++|++.+....... ... .....+. .++.+++.+|.++++
T Consensus 84 ~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd~~~~~~~~~~-----~~~----~~~~~~~--~~~~~~~~~d~~i~~ 147 (365)
T cd03809 84 LGLDLLHSPHNTAPLL-----RLRGVPVVVTIHDLIPLRFPEYF-----SPG----FRRYFRR--LLRRALRRADAIITV 147 (365)
T ss_pred cCCCeeeecccccCcc-----cCCCCCEEEEeccchhhhCcccC-----CHH----HHHHHHH--HHHHHHHHcCEEEEc
Confidence 4699999998754443 56799999999998654422111 000 1111222 256689999999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+...|.. .+. ++.++|||+|...+.+.... .
T Consensus 148 s~~~~~~~~~~~~~-~~~---------------------~~~vi~~~~~~~~~~~~~~~------------------~-- 185 (365)
T cd03809 148 SEATKRDLLRYLGV-PPD---------------------KIVVIPLGVDPRFRPPPAEA------------------E-- 185 (365)
T ss_pred cHHHHHHHHHHhCc-CHH---------------------HEEeeccccCccccCCCchH------------------H--
Confidence 99888887666542 121 89999999999877642100 0
Q ss_pred HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCC
Q 001557 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 544 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~ 544 (1054)
.......++++.|+++||+.+.||++.+++++..+....+...+ +++|.+..... .....+.+.++..
T Consensus 186 -~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l-~i~G~~~~~~~----------~~~~~~~~~~~~~ 253 (365)
T cd03809 186 -VLRALYLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKL-VIVGKRGWLNE----------ELLARLRELGLGD 253 (365)
T ss_pred -HHHHhcCCCCCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCE-EEecCCccccH----------HHHHHHHHcCCCC
Confidence 11222346778999999999999999999999999754332333 36676543221 1222235678888
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHH
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIA 624 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la 624 (1054)
+|.++|+++.+++..+|+.| |++|+|+..|+||++++|||++|+|||+++.|+..|++. .+|+++++.|+++++
T Consensus 254 ~v~~~g~~~~~~~~~~~~~~----d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~ 327 (365)
T cd03809 254 RVRFLGYVSDEELAALYRGA----RAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALA 327 (365)
T ss_pred eEEECCCCChhHHHHHHhhh----hhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHH
Confidence 99999999999999999999 999999999999999999999999999999999999974 579999999999999
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 001557 625 DALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLS 662 (1054)
Q Consensus 625 ~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~ 662 (1054)
++|.+++.+++.+.++++++++.++.|+|+.++++|++
T Consensus 328 ~~i~~l~~~~~~~~~~~~~~~~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 328 AAIERLLEDPALREELRERGLARAKRFSWEKTARRTLD 365 (365)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHhC
Confidence 99999999999999999999987789999999998863
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-29 Score=295.57 Aligned_cols=412 Identities=16% Similarity=0.177 Sum_probs=271.0
Q ss_pred hhhhhccCcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCce--EEEEEecCcCCCCCCCccCCcc
Q 001557 156 NWAIQYKEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVY--RVDLLTRQVSAPDVDWTYAEPS 233 (1054)
Q Consensus 156 ~~~~~~~~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~--~V~vvt~~~~~p~~~~~~~~~~ 233 (1054)
.|-.....++++|+++.++ + ...||.++.+.+.+++|.+. | + .|.++|...+ + +. .
T Consensus 24 ~~~~~~~~~~~~v~f~HP~-~-----------~~ggG~ERvl~~a~~~l~~~-~-~~~~v~iyt~~~d-~----~~---~ 81 (463)
T PLN02949 24 SVLRARRSRKRAVGFFHPY-T-----------NDGGGGERVLWCAVRAIQEE-N-PDLDCVIYTGDHD-A----SP---D 81 (463)
T ss_pred HHHhcccCCCcEEEEECCC-C-----------CCCCChhhHHHHHHHHHHhh-C-CCCeEEEEcCCCC-C----CH---H
Confidence 3445556678899999663 1 12369999999999999998 6 6 7888886532 1 11 1
Q ss_pred cccccccccccccccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEc
Q 001557 234 EMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGH 313 (1054)
Q Consensus 234 ~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h 313 (1054)
+.+... .+.|.-++. ....++++..+ .++ ....||++.-+ ...++.+....+.+.. ..|||+.-.
T Consensus 82 ~~l~~~-~~~~~i~~~--~~~~~v~l~~~---~~~-~~~~~~~~t~~-~~~~~~~~l~~~~~~~-------~~p~v~vDt 146 (463)
T PLN02949 82 SLAARA-RDRFGVELL--SPPKVVHLRKR---KWI-EEETYPRFTMI-GQSLGSVYLAWEALCK-------FTPLYFFDT 146 (463)
T ss_pred HHHHHH-HhhcceecC--CCceEEEeccc---ccc-ccccCCceehH-HHHHHHHHHHHHHHHh-------cCCCEEEeC
Confidence 111000 001111111 12233333211 334 33456664322 2223333322233322 236544433
Q ss_pred CC-CchHHHHHHHccCCCCEEEEeCCCccch--HHHHHHhCC--------CChhh-hhhHhHHHHHHH--HHHhhhccCC
Q 001557 314 YA-DAGDAAALLSGALNVPMVFTGHSLGRDK--LEQLLKQGR--------LSRDE-INTTYKIMRRIE--AEELSLDASE 379 (1054)
Q Consensus 314 ~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~--~~~l~~~g~--------~~~~~-i~~~~~~~~ri~--~E~~~l~~ad 379 (1054)
.. ..++. +.+..++|+++++|...-.. +... ..+. ..... ......+.++.. .++++.+.||
T Consensus 147 ~~~~~~~p---l~~~~~~~v~~yvH~p~~~~dm~~~v-~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad 222 (463)
T PLN02949 147 SGYAFTYP---LARLFGCKVVCYTHYPTISSDMISRV-RDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAH 222 (463)
T ss_pred CCcccHHH---HHHhcCCcEEEEEeCCcchHHHHHHH-hhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 22 12222 22345899999999532111 1110 0000 00000 011111111211 3677889999
Q ss_pred EEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCC
Q 001557 380 IVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPD 459 (1054)
Q Consensus 380 ~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~ 459 (1054)
.|+++|+...+.+.+.+.. + .++.+++||+|...+......
T Consensus 223 ~ii~nS~~t~~~l~~~~~~--~---------------------~~i~vvyp~vd~~~~~~~~~~---------------- 263 (463)
T PLN02949 223 LAMVNSSWTKSHIEALWRI--P---------------------ERIKRVYPPCDTSGLQALPLE---------------- 263 (463)
T ss_pred EEEECCHHHHHHHHHHcCC--C---------------------CCeEEEcCCCCHHHcccCCcc----------------
Confidence 9999999887776544422 1 278999999998766321100
Q ss_pred CchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc--CCCcEEE-EEecCCCchhhhhchHHHHHHHHHH
Q 001557 460 PPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLR--ELANLTL-IMGNRDDIDEMSGTNAALLLSILKL 536 (1054)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~--~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l 536 (1054)
..++.++|+++||+.+.||++.+|+||..+.+.. ..+++.| |+|++.. .++.++..+++++
T Consensus 264 -----------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~-----~~~~~~~~eL~~l 327 (463)
T PLN02949 264 -----------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN-----KEDEERLQKLKDR 327 (463)
T ss_pred -----------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC-----cccHHHHHHHHHH
Confidence 0134678999999999999999999999875421 2345655 6777642 1224567789999
Q ss_pred HHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc-cceee---CCce
Q 001557 537 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV-DIHRV---LDNG 612 (1054)
Q Consensus 537 ~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~-eiv~~---~~~G 612 (1054)
++++++.++|.|+|+++.+++..+|+.| +++|+|+..|+||++++||||||+|||+++.||+. |++.+ +.+|
T Consensus 328 a~~l~L~~~V~f~g~v~~~el~~ll~~a----~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG 403 (463)
T PLN02949 328 AKELGLDGDVEFHKNVSYRDLVRLLGGA----VAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTG 403 (463)
T ss_pred HHHcCCCCcEEEeCCCCHHHHHHHHHhC----cEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCccc
Confidence 9999999999999999999999999999 99999999999999999999999999999999975 77765 5689
Q ss_pred EEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001557 613 LLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 613 llv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~ 669 (1054)
++++ |+++++++|.++++ +++.++++++++++.+++|||+..+++|.+.+..+.+
T Consensus 404 ~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~ 459 (463)
T PLN02949 404 FLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILN 459 (463)
T ss_pred ccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 9985 99999999999998 5788889999999999889999999999999987764
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-30 Score=296.13 Aligned_cols=379 Identities=16% Similarity=0.129 Sum_probs=242.1
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccc
Q 001557 163 EKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTE 242 (1054)
Q Consensus 163 ~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~ 242 (1054)
.++|||+++|.-++ |..+|....+..++..|+++ |-|+|+||++.....+....|+. +.. .....
T Consensus 2 ~~~mrIaivTdt~l-----------P~vnGva~s~~~~a~~L~~~-G~heV~vvaP~~~~~~~~~~~~~--~~~-f~~~~ 66 (462)
T PLN02846 2 QKKQHIAIFTTASL-----------PWMTGTAVNPLFRAAYLAKD-GDREVTLVIPWLSLKDQKLVYPN--KIT-FSSPS 66 (462)
T ss_pred CCCCEEEEEEcCCC-----------CCCCCeeccHHHHHHHHHhc-CCcEEEEEecCCccccccccccc--ccc-ccCch
Confidence 35799999997443 88999999999999999999 73499999975421110001110 000 00000
Q ss_pred ccccccCCCCCeEEEEccCCCCCcccc-----cccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCC-C
Q 001557 243 NLMQGLGESSGAYIIRIPFGPKDKYVQ-----KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA-D 316 (1054)
Q Consensus 243 ~~~~~~~~~~g~~i~rip~g~~~~~l~-----k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~-~ 316 (1054)
.....+.+..+-++.++|.-+...|-. ...+++. . .+.+.+.+ .+|||||.|.+ .
T Consensus 67 ~~e~~~~~~~~~~v~r~~s~~~p~yp~r~~~~~r~~~~~-----~-------~i~~~l~~-------~~pDVIHv~tP~~ 127 (462)
T PLN02846 67 EQEAYVRQWLEERISFLPKFSIKFYPGKFSTDKRSILPV-----G-------DISETIPD-------EEADIAVLEEPEH 127 (462)
T ss_pred hhhhhhhhhccCeEEEecccccccCcccccccccccCCh-----H-------HHHHHHHh-------cCCCEEEEcCchh
Confidence 000011111233555555433311111 1111111 1 12222222 67999999986 4
Q ss_pred chHH--HHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHh
Q 001557 317 AGDA--AALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR 394 (1054)
Q Consensus 317 a~~~--a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~ 394 (1054)
.|.. +...++++++ +|.+.|.-..+..... ..|...........++++| .++|.|++.|....+ +.+
T Consensus 128 LG~~~~g~~~~~k~~~-vV~tyHT~y~~Y~~~~-~~g~~~~~l~~~~~~~~~r--------~~~d~vi~pS~~~~~-l~~ 196 (462)
T PLN02846 128 LTWYHHGKRWKTKFRL-VIGIVHTNYLEYVKRE-KNGRVKAFLLKYINSWVVD--------IYCHKVIRLSAATQD-YPR 196 (462)
T ss_pred hhhHHHHHHHHhcCCc-EEEEECCChHHHHHHh-ccchHHHHHHHHHHHHHHH--------HhcCEEEccCHHHHH-Hhh
Confidence 4554 6666766655 8889998544333221 1111111011111222222 248999999974332 210
Q ss_pred hhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCC
Q 001557 395 LYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPR 474 (1054)
Q Consensus 395 ~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1054)
.+.+.++|||.+.|.+.... .. ......+
T Consensus 197 -----------------------------~~i~~v~GVd~~~f~~~~~~-------------------~~---~~~~~~~ 225 (462)
T PLN02846 197 -----------------------------SIICNVHGVNPKFLEIGKLK-------------------LE---QQKNGEQ 225 (462)
T ss_pred -----------------------------CEEecCceechhhcCCCccc-------------------Hh---hhcCCCC
Confidence 34556799999988754211 00 0111122
Q ss_pred --CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 475 --KPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 475 --~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~-LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
.+.++|+||+.+.||++.+|+|+..+.. ..+++. +|+|+|++ ..++++++.++++..++ |.|.
T Consensus 226 ~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~--~~~~~~l~ivGdGp~-----------~~~L~~~a~~l~l~~~v-f~G~ 291 (462)
T PLN02846 226 AFTKGAYYIGKMVWSKGYKELLKLLHKHQK--ELSGLEVDLYGSGED-----------SDEVKAAAEKLELDVRV-YPGR 291 (462)
T ss_pred CcceEEEEEecCcccCCHHHHHHHHHHHHh--hCCCeEEEEECCCcc-----------HHHHHHHHHhcCCcEEE-ECCC
Confidence 3579999999999999999999998853 234555 48899987 45567788888876444 7775
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHH
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLV 631 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1054)
. +..++|+.+ ||||+||..|+||++++||||||+|||+++.++ .+++.++.+|++++ |.++++++|.+++
T Consensus 292 ~---~~~~~~~~~----DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l 361 (462)
T PLN02846 292 D---HADPLFHDY----KVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKAL 361 (462)
T ss_pred C---CHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHH
Confidence 3 445799999 999999999999999999999999999999998 59999999999995 8999999999999
Q ss_pred hCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001557 632 SDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 632 ~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
+++. ..++..+ .+.|||+..+++|++.++-
T Consensus 362 ~~~~--~~~~~~a---~~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 362 AEEP--APLTDAQ---RHELSWEAATERFLRVADL 391 (462)
T ss_pred ccCc--hhHHHHH---HHhCCHHHHHHHHHHHhcc
Confidence 8532 2222222 2599999999999999984
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=300.24 Aligned_cols=282 Identities=16% Similarity=0.149 Sum_probs=188.0
Q ss_pred CcceEEEEcCCCchHHHH---------HHHccCCCCEEEEeCCCccchH--------HHHHHhCC--------CChhhhh
Q 001557 305 IWPVAIHGHYADAGDAAA---------LLSGALNVPMVFTGHSLGRDKL--------EQLLKQGR--------LSRDEIN 359 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~---------~l~~~~~iP~V~t~H~l~~~~~--------~~l~~~g~--------~~~~~i~ 359 (1054)
.+|||||.|....+++.. ...+..++|+|+|.|+.+.-.- ..+ +.+- .+.....
T Consensus 93 ~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~-~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 93 PGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGW-KTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred cCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccc-cccCCCCCCccCCCCCccc
Confidence 679999999764432211 1124568999999999875420 001 0000 0000000
Q ss_pred hH-hHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcc
Q 001557 360 TT-YKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIV 438 (1054)
Q Consensus 360 ~~-~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~ 438 (1054)
.. ..+.++...-...++.++.+|++|+...+.+...+.. .++.|||||||...+.
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~~------------------------~~i~vI~NGid~~~~~ 227 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGP------------------------GRCRIINNGIDMATEA 227 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcCC------------------------CCEEEeCCCcCccccc
Confidence 00 0111111112223456789999999887765443321 2899999999975433
Q ss_pred cCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCC--CCCCCHHHHHHHHHhcccccCCCcEEE-EEec
Q 001557 439 RHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP--DPKKNITTLVKAFGECRPLRELANLTL-IMGN 515 (1054)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl--d~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~ 515 (1054)
+..... + ....+++++|+++|+. ++.||+..+++|+..+. +++.| ++|.
T Consensus 228 ~~~~~~---------------~--------~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-----~~~~L~ivG~ 279 (405)
T PRK10125 228 ILAELP---------------P--------VRETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-----DKIELHTFGK 279 (405)
T ss_pred cccccc---------------c--------cccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-----CCeEEEEEcC
Confidence 211000 0 0012567889999994 47899999999999873 24554 6787
Q ss_pred CCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCC-CCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCE
Q 001557 516 RDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH-KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPI 594 (1054)
Q Consensus 516 ~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~-~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PV 594 (1054)
++... ...+.++|+. +..++..+|+.| |+||+||..|+||++++||||||+||
T Consensus 280 g~~~~----------------------~~~v~~~g~~~~~~~l~~~y~~a----DvfV~pS~~Egfp~vilEAmA~G~PV 333 (405)
T PRK10125 280 FSPFT----------------------AGNVVNHGFETDKRKLMSALNQM----DALVFSSRVDNYPLILCEALSIGVPV 333 (405)
T ss_pred CCccc----------------------ccceEEecCcCCHHHHHHHHHhC----CEEEECCccccCcCHHHHHHHcCCCE
Confidence 64210 1357778875 456899999999 99999999999999999999999999
Q ss_pred EEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 595 VATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 595 Iat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
|+|+.||++|++.+. +|++|+|.|++++|+++...+.+.. ...+..++++.+ +.|||+.++++|+++|+++
T Consensus 334 Vat~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~~~~~~~~~-~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 334 IATHSDAAREVLQKS-GGKTVSEEEVLQLAQLSKPEIAQAV-FGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred EEeCCCChHHhEeCC-cEEEECCCCHHHHHhccCHHHHHHh-hhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 999999999999764 8999999999999986533222110 011234577776 6899999999999999863
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=296.78 Aligned_cols=375 Identities=18% Similarity=0.216 Sum_probs=249.3
Q ss_pred CcHhHHHHHHHHHHhcC-CCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEcc-CCCCCccc
Q 001557 191 GGQVKYVVELARALGSM-PGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIP-FGPKDKYV 268 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~-~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip-~g~~~~~l 268 (1054)
||.++.+.+.+.+|.+. ++ ++|+|+|....... .+.+. .....|. ....+++.++++. .+ .++
T Consensus 14 gg~ervl~~a~~~l~~~~~~-~~v~i~t~~~~~~~--------~~~l~-~~~~~f~--~~~~~~~~~~~~~~~~---~~~ 78 (419)
T cd03806 14 GGGERVLWCAVRALQKRYPN-NIVVIYTGDLDATP--------EEILE-KVESRFN--IELDRPRIVFFLLKYR---KLV 78 (419)
T ss_pred CCchHHHHHHHHHHHHhCCC-cEEEEECCCCCCCH--------HHHHH-HHHHhcC--eecCCCceEEEEecce---eee
Confidence 69999999999999886 46 89999998642110 00000 0000111 1223466666653 21 122
Q ss_pred ccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcC-CCchHHHHHHHccCCCCEEEEeCCCcc----ch
Q 001557 269 QKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHY-ADAGDAAALLSGALNVPMVFTGHSLGR----DK 343 (1054)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~-~~a~~~a~~l~~~~~iP~V~t~H~l~~----~~ 343 (1054)
....|+++..+...+ ..+....+.+.. ..||||..|. +..++....+ ..++|+|+.+| ++ +.
T Consensus 79 -~~~~~~r~~~~~~~~-~~~~~~~~~~~~-------~~pDv~i~~~g~~~~~~~~~~--~~~~~~i~y~h--~P~~~~d~ 145 (419)
T cd03806 79 -EASTYPRFTLLGQAL-GSMILGLEALLK-------LVPDIFIDTMGYPFTYPLVRL--LGGCPVGAYVH--YPTISTDM 145 (419)
T ss_pred -ccccCCceeeHHHHH-HHHHHHHHHHHh-------cCCCEEEEcCCcccHHHHHHH--hcCCeEEEEec--CCcchHHH
Confidence 223555533221211 111111222211 4599998886 4333333222 22889999999 44 22
Q ss_pred HHHHHHhCC--------CChhh----hhhHh-HHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHh
Q 001557 344 LEQLLKQGR--------LSRDE----INTTY-KIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRAR 410 (1054)
Q Consensus 344 ~~~l~~~g~--------~~~~~----i~~~~-~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r 410 (1054)
+.. +..+. +.+.. +...| +++.+ .|+++++.||.|+++|+...+.+...+...
T Consensus 146 l~~-~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~--~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~----------- 211 (419)
T cd03806 146 LQK-VRSREASYNNSATIARSPVLSKAKLLYYRLFAF--LYGLAGSFADVVMVNSTWTRNHIRSLWKRN----------- 211 (419)
T ss_pred HHH-HhhccccccCccchhccchHHHHHHHHHHHHHH--HHHHHhhcCCEEEECCHHHHHHHHHHhCcC-----------
Confidence 211 11111 11111 11111 12222 478899999999999998777665444321
Q ss_pred HhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCH
Q 001557 411 IKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNI 490 (1054)
Q Consensus 411 ~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi 490 (1054)
.++.|||||+|.+.|.+.... ...+.++|+++||+.+.||+
T Consensus 212 ------------~~~~vi~~gvd~~~~~~~~~~---------------------------~~~~~~~il~vgr~~~~K~~ 252 (419)
T cd03806 212 ------------TKPSIVYPPCDVEELLKLPLD---------------------------EKTRENQILSIAQFRPEKNH 252 (419)
T ss_pred ------------CCcEEEcCCCCHHHhcccccc---------------------------cccCCcEEEEEEeecCCCCH
Confidence 278999999999877632110 02456899999999999999
Q ss_pred HHHHHHHHhcccccCC---CcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhc
Q 001557 491 TTLVKAFGECRPLREL---ANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 566 (1054)
Q Consensus 491 ~~ll~A~~~l~~~~~~---~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~ 566 (1054)
..+|+||..+.+..+. +++.| |+|++... +..++...++++++++++.++|.|+|.++.+++..+|+.|
T Consensus 253 ~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~-----~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l~~a-- 325 (419)
T cd03806 253 PLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE-----DDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEELSTA-- 325 (419)
T ss_pred HHHHHHHHHHHHhCcccccCceEEEEEcCCCCc-----ccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHHHHhC--
Confidence 9999999999754443 35665 66765421 1234678889999999999999999999999999999999
Q ss_pred CCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCc-cccee---eCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001557 567 TKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP-VDIHR---VLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQ 642 (1054)
Q Consensus 567 ~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~-~eiv~---~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 642 (1054)
|++|+|+..|+||++++||||||+|||+++.||+ .|++. ++.+|++++ |+++++++|.+++++++...++..
T Consensus 326 --dv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~ 401 (419)
T cd03806 326 --SIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIR 401 (419)
T ss_pred --eEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHH
Confidence 9999999999999999999999999999999876 47887 789999985 999999999999997655444344
Q ss_pred HHHHHH-hcCCHHHHH
Q 001557 643 NGLKNI-HQFSWPEHC 657 (1054)
Q Consensus 643 ~~~~~v-~~fsw~~~a 657 (1054)
++.+.+ ++|||+...
T Consensus 402 ~~~~~~~~~fs~~~f~ 417 (419)
T cd03806 402 RAARSSVKRFSDEEFE 417 (419)
T ss_pred HHHHHHHHhhCHHHhc
Confidence 444445 899998764
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=285.36 Aligned_cols=344 Identities=24% Similarity=0.341 Sum_probs=248.7
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++++.+.. + .||..+++.+|+++|.+. | |+|++++..... . ..
T Consensus 1 kI~i~~~~~~-----------~-~gG~~~~~~~l~~~L~~~-g-~~v~v~~~~~~~---~-----~~------------- 45 (348)
T cd03820 1 KILFVIPSLG-----------N-AGGAERVLSNLANALAEK-G-HEVTIISLDKGE---P-----PF------------- 45 (348)
T ss_pred CeEEEecccc-----------C-CCChHHHHHHHHHHHHhC-C-CeEEEEecCCCC---C-----Cc-------------
Confidence 5788885321 2 699999999999999998 8 999999975321 0 00
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHc
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 326 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~ 326 (1054)
.....++.+..++..+.. ..+... .....+.+.+.. .+||+||++.... .......
T Consensus 46 -~~~~~~~~~~~~~~~~~~------~~~~~~--------~~~~~~~~~l~~-------~~~d~i~~~~~~~--~~~~~~~ 101 (348)
T cd03820 46 -YELDPKIKVIDLGDKRDS------KLLARF--------KKLRRLRKLLKN-------NKPDVVISFLTSL--LTFLASL 101 (348)
T ss_pred -cccCCccceeeccccccc------chhccc--------cchHHHHHhhcc-------cCCCEEEEcCchH--HHHHHHH
Confidence 001235566665543221 000000 001111122211 5699999998652 1122222
Q ss_pred cCC-CCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 327 ALN-VPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 327 ~~~-iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
..+ +|++++.|+......... .+...++..++.+|.+++.|+...... +..
T Consensus 102 ~~~~~~~i~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~d~ii~~s~~~~~~~---~~~------- 153 (348)
T cd03820 102 GLKIVKLIVSEHNSPDAYKKRL------------------RRLLLRRLLYRRADAVVVLTEEDRALY---YKK------- 153 (348)
T ss_pred hhccccEEEecCCCccchhhhh------------------HHHHHHHHHHhcCCEEEEeCHHHHHHh---hcc-------
Confidence 234 599999998644331110 000135567999999999998765211 111
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCC
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 485 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld 485 (1054)
+..++.++|||++...+.+. ...+.+.|+++|++.
T Consensus 154 ---------------~~~~~~vi~~~~~~~~~~~~------------------------------~~~~~~~i~~~g~~~ 188 (348)
T cd03820 154 ---------------FNKNVVVIPNPLPFPPEEPS------------------------------SDLKSKRILAVGRLV 188 (348)
T ss_pred ---------------CCCCeEEecCCcChhhcccc------------------------------CCCCCcEEEEEEeec
Confidence 11289999999998766532 125578899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001557 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 564 (1054)
Q Consensus 486 ~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A 564 (1054)
+.||++.+++|+..+.+ ..+++.+ ++|.++. ...+.+++.++++.+.|.+.|. .+++..+|+.|
T Consensus 189 ~~K~~~~l~~~~~~l~~--~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a 253 (348)
T cd03820 189 PQKGFDLLIEAWAKIAK--KHPDWKLRIVGDGPE-----------REALEALIKELGLEDRVILLGF--TKNIEEYYAKA 253 (348)
T ss_pred cccCHHHHHHHHHHHHh--cCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhC
Confidence 99999999999999964 3455555 6787765 2345567888899899999998 78999999999
Q ss_pred hcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcccc-CcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001557 565 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQN 643 (1054)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~G-g~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1054)
|++|+||..|+||++++|||+||+|||+++.+ +..+++.++.+|+++++.|+++++++|.+++++++.+++++++
T Consensus 254 ----d~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~ 329 (348)
T cd03820 254 ----SIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGAN 329 (348)
T ss_pred ----CEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999964 5677777777999999999999999999999999999999999
Q ss_pred HHHHHhcCCHHHHHHHHH
Q 001557 644 GLKNIHQFSWPEHCKSYL 661 (1054)
Q Consensus 644 ~~~~v~~fsw~~~a~~yl 661 (1054)
+++.++.|+|+.++++|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 330 ARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHhCHHHHHHHhc
Confidence 977778999999999885
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-29 Score=287.38 Aligned_cols=356 Identities=20% Similarity=0.234 Sum_probs=248.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++|+.+ + |..||.++++.+|+++|++. | |+|.+++.....+... ..
T Consensus 1 kI~~v~~~-~-----------~~~gG~~~~~~~l~~~L~~~-g-~~v~v~~~~~~~~~~~--------~~---------- 48 (366)
T cd03822 1 RIALVSPY-P-----------PRKCGIATFTTDLVNALSAR-G-PDVLVVSVAALYPSLL--------YG---------- 48 (366)
T ss_pred CeEEecCC-C-----------CCCCcHHHHHHHHHHHhhhc-C-CeEEEEEeecccCccc--------CC----------
Confidence 68999863 2 45799999999999999999 8 9999998653211110 00
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCC---chH---H
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD---AGD---A 320 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~---a~~---~ 320 (1054)
.......... .. .+ .....+ .+.+.. .+||+||++.+. ... .
T Consensus 49 --~~~~~~~~~~-~~------------~~---~~~~~~-------~~~~~~-------~~~dii~~~~~~~~~~~~~~~~ 96 (366)
T cd03822 49 --GEQEVVRVIV-LD------------NP---LDYRRA-------ARAIRL-------SGPDVVVIQHEYGIFGGEAGLY 96 (366)
T ss_pred --Ccccceeeee-cC------------Cc---hhHHHH-------HHHHhh-------cCCCEEEEeeccccccchhhHH
Confidence 0000111110 00 00 000111 111111 569999998732 112 2
Q ss_pred HHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCC
Q 001557 321 AALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400 (1054)
Q Consensus 321 a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~ 400 (1054)
.....+..++|+|++.|+...... . ... .+ .++..++.+|.|+++|.....++.....
T Consensus 97 ~~~~~~~~~~~~i~~~h~~~~~~~-------~-------~~~---~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~--- 154 (366)
T cd03822 97 LLLLLRGLGIPVVVTLHTVLLHEP-------R-------PGD---RA--LLRLLLRRADAVIVMSSELLRALLLRAY--- 154 (366)
T ss_pred HHHHHhhcCCCEEEEEecCCcccc-------c-------hhh---hH--HHHHHHhcCCEEEEeeHHHHHHHHhhcC---
Confidence 222234579999999999711110 0 000 11 2344688999999997444333322111
Q ss_pred hHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEE
Q 001557 401 PVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILA 480 (1054)
Q Consensus 401 ~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 480 (1054)
..++.+||||++...+.+... ........++++|++
T Consensus 155 ---------------------~~~~~~i~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~ 190 (366)
T cd03822 155 ---------------------PEKIAVIPHGVPDPPAEPPES-----------------------LKALGGLDGRPVLLT 190 (366)
T ss_pred ---------------------CCcEEEeCCCCcCcccCCchh-----------------------hHhhcCCCCCeEEEE
Confidence 128999999999876653210 012222456789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC-CCCCcHH
Q 001557 481 LARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH-HKQSDVP 558 (1054)
Q Consensus 481 vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~-~~~~dl~ 558 (1054)
+||+.+.||++.+++|+..+... .+++.+ ++|.+....... .....+++.++++.++|.|+|. ++.+++.
T Consensus 191 ~G~~~~~K~~~~ll~a~~~~~~~--~~~~~l~i~G~~~~~~~~~------~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 191 FGLLRPYKGLELLLEALPLLVAK--HPDVRLLVAGETHPDLERY------RGEAYALAERLGLADRVIFINRYLPDEELP 262 (366)
T ss_pred EeeccCCCCHHHHHHHHHHHHhh--CCCeEEEEeccCccchhhh------hhhhHhHHHhcCCCCcEEEecCcCCHHHHH
Confidence 99999999999999999998643 345555 677765321110 1111145788899999999987 9999999
Q ss_pred HHHHHhhcCCcEEEecCCCC--CCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHH
Q 001557 559 DIYRLAAKTKGVFINPAFIE--PFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQL 636 (1054)
Q Consensus 559 ~ly~~Aa~~~dv~v~ps~~E--gfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 636 (1054)
.+|+.| |++++|+..| +||++++||||||+|||+++.|+ .+.+.+..+|+++++.|+++++++|.+++++++.
T Consensus 263 ~~~~~a----d~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~ 337 (366)
T cd03822 263 ELFSAA----DVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPEL 337 (366)
T ss_pred HHHhhc----CEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHH
Confidence 999999 9999999999 99999999999999999999999 6777778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001557 637 WERCRQNGLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 637 ~~~~~~~~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
+.++++++++.++.|||+.++++|.++|+
T Consensus 338 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 338 AQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 99999999999966999999999998873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=286.63 Aligned_cols=350 Identities=21% Similarity=0.279 Sum_probs=253.9
Q ss_pred CcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCccccc
Q 001557 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQK 270 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k 270 (1054)
||.++++..|+++|.+. | ++|.+++.....+ .... ....++.++.++....
T Consensus 12 gG~~~~~~~l~~~l~~~-~-~~v~~~~~~~~~~--------~~~~-------------~~~~~i~v~~~~~~~~------ 62 (365)
T cd03807 12 GGAERMLVRLLKGLDRD-R-FEHVVISLTDRGE--------LGEE-------------LEEAGVPVYCLGKRPG------ 62 (365)
T ss_pred ccHHHHHHHHHHHhhhc-c-ceEEEEecCcchh--------hhHH-------------HHhcCCeEEEEecccc------
Confidence 89999999999999988 7 9999998642110 0000 0113677777664321
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHcc-CCCCEEEEeCCCccchHHHHHH
Q 001557 271 ELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLK 349 (1054)
Q Consensus 271 ~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~ 349 (1054)
+... .+.. ++.+.+.+ .+||+||+|.......+...+.. .++|++++.|+......
T Consensus 63 ---~~~~-~~~~-------~~~~~~~~-------~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----- 119 (365)
T cd03807 63 ---RPDP-GALL-------RLYKLIRR-------LRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG----- 119 (365)
T ss_pred ---cccH-HHHH-------HHHHHHHh-------hCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc-----
Confidence 1111 1111 12222222 56999999986655555555544 68999999998755421
Q ss_pred hCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeC
Q 001557 350 QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 429 (1054)
Q Consensus 350 ~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIP 429 (1054)
+. ...+..+ .+....+.++.++++|+...+.+... ++.. .++.++|
T Consensus 120 -~~--------~~~~~~~--~~~~~~~~~~~~i~~s~~~~~~~~~~--~~~~---------------------~~~~vi~ 165 (365)
T cd03807 120 -KK--------STRLVAR--LRRLLSSFIPLIVANSAAAAEYHQAI--GYPP---------------------KKIVVIP 165 (365)
T ss_pred -ch--------hHhHHHH--HHHHhccccCeEEeccHHHHHHHHHc--CCCh---------------------hheeEeC
Confidence 00 0011111 24456788999999998776655432 2222 2899999
Q ss_pred CCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcE
Q 001557 430 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANL 509 (1054)
Q Consensus 430 nGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l 509 (1054)
||+|...|.+.... ....+..+..+++.++|+++||+.+.||++.+++|+..+.+. .+++
T Consensus 166 ~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~~ 225 (365)
T cd03807 166 NGVDTERFSPDLDA------------------RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLKK--FPNA 225 (365)
T ss_pred CCcCHHhcCCcccc------------------hHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHHHh--CCCe
Confidence 99998877643211 111123344456778999999999999999999999998643 4456
Q ss_pred EE-EEecCCCchhhhhchHHHHHHHHHHHH-HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHH
Q 001557 510 TL-IMGNRDDIDEMSGTNAALLLSILKLID-KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEA 587 (1054)
Q Consensus 510 ~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~-~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EA 587 (1054)
.+ ++|.++... .+..... .+++.++|.+.|. .+++..+|+.| |++|+|+..|+||++++||
T Consensus 226 ~l~i~G~~~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~e~~~~~~~Ea 288 (365)
T cd03807 226 RLLLVGDGPDRA-----------NLELLALKELGLEDKVILLGE--RSDVPALLNAL----DVFVLSSLSEGFPNVLLEA 288 (365)
T ss_pred EEEEecCCcchh-----------HHHHHHHHhcCCCceEEEccc--cccHHHHHHhC----CEEEeCCccccCCcHHHHH
Confidence 65 667765422 2233333 7788889999996 57899999999 9999999999999999999
Q ss_pred HHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 588 AAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 588 mA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
|+||+|||+++.|+..+++.+ +|+++++.|+++++++|.+++++++.+.++++++++.+ +.|||+..+++|.++|+
T Consensus 289 ~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 289 MACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999999876 89999999999999999999999999999999999999 68999999999999873
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-29 Score=287.89 Aligned_cols=278 Identities=21% Similarity=0.248 Sum_probs=209.9
Q ss_pred CcceEEEEcCCCchHHHHHHHc-cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYADAGDAAALLSG-ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~-~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||+|...+..++.++.. ..++|+|++.|+...... ...+. .+.....++.+++
T Consensus 78 ~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~----------------~~~~~-----~~~~~~~~~~~~~ 136 (360)
T cd04951 78 FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGR----------------LRMLA-----YRLTDFLSDLTTN 136 (360)
T ss_pred cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhH----------------HHHHH-----HHHHhhccCceEE
Confidence 5699999998766555554443 347899999998643210 01111 1223455778888
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
+|....+.+..... .+..++.+||||+|...|.+... ...
T Consensus 137 ~s~~~~~~~~~~~~----------------------~~~~~~~~i~ng~~~~~~~~~~~------------------~~~ 176 (360)
T cd04951 137 VSKEALDYFIASKA----------------------FNANKSFVVYNGIDTDRFRKDPA------------------RRL 176 (360)
T ss_pred EcHHHHHHHHhccC----------------------CCcccEEEEccccchhhcCcchH------------------HHH
Confidence 88876665543321 11238999999999887764211 111
Q ss_pred HHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 464 SEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
.....+...+++++++++||+.+.||++.+++|+..+.+.. +++.+ |+|+++. ...+.+.+.++++
T Consensus 177 ~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~--~~~~l~i~G~g~~-----------~~~~~~~~~~~~~ 243 (360)
T cd04951 177 KIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDY--LDIKLLIAGDGPL-----------RATLERLIKALGL 243 (360)
T ss_pred HHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhC--CCeEEEEEcCCCc-----------HHHHHHHHHhcCC
Confidence 12223334567789999999999999999999999886433 45565 7788765 3456677788888
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHH
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 622 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~ 622 (1054)
.++|.|+|. .+++..+|+.| |++|+||..|+||++++||||+|+|||+++.|+..|++.+ +|+++++.|+++
T Consensus 244 ~~~v~~~g~--~~~~~~~~~~a----d~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~ 315 (360)
T cd04951 244 SNRVKLLGL--RDDIAAYYNAA----DLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEA 315 (360)
T ss_pred CCcEEEecc--cccHHHHHHhh----ceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHH
Confidence 889999997 46899999999 9999999999999999999999999999999999999875 899999999999
Q ss_pred HHHHHHHHHh-CHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 623 IADALLKLVS-DKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 623 la~aI~~ll~-d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
++++|.++++ ++..+..++.+ ++.+ +.|||+.++++|.++|.
T Consensus 316 ~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 316 LANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 9999999995 55555555555 6666 79999999999999985
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-32 Score=304.92 Aligned_cols=255 Identities=33% Similarity=0.494 Sum_probs=180.5
Q ss_pred hhhhhhhccCcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCc-----------eEEEEEecCcCC
Q 001557 154 MENWAIQYKEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGV-----------YRVDLLTRQVSA 222 (1054)
Q Consensus 154 ~~~~~~~~~~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv-----------~~V~vvt~~~~~ 222 (1054)
++.+-... +|-.+|+++|+||++++++| ||| ||||||+.||+++|++|.+. ++ -+|.++|+.+.+
T Consensus 262 LE~Fl~Ri-Pmvf~vvliSpHG~f~q~nv-LG~-pDTGGQVvYVleqarALe~e-~~~ri~~~gl~i~p~i~i~TRlIpd 337 (550)
T PF00862_consen 262 LEKFLSRI-PMVFNVVLISPHGYFGQENV-LGR-PDTGGQVVYVLEQARALENE-MLYRIKLQGLDITPKIDIVTRLIPD 337 (550)
T ss_dssp HHHHHHHS----SEEEEE--SS--STTST-TSS-TTSSHHHHHHHHHHHHHHHH-THHHHHHTT-----EEEEEEE--TB
T ss_pred HHHHhhhc-ceeEEEEEEcCccccccccc-cCC-CCCCCcEEEEeHHHHHHHHH-HHHHHHhcCCCCCCceeeecccccC
Confidence 34433333 55679999999999999999 999 99999999999999999874 21 259999998743
Q ss_pred CCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCC----cccccccCCCChHHHHHHHHHHHHHHHHHHhhh
Q 001557 223 PDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKD----KYVQKELLWPHIPEFVDAALTHIIQISKVLGEQ 298 (1054)
Q Consensus 223 p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~----~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~ 298 (1054)
.. ...+.++. +.+...++++|+|+||++.+ +|+.|+.+|||+.+|++.+...+..- +
T Consensus 338 ~~-~t~~~q~l------------e~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e---~--- 398 (550)
T PF00862_consen 338 AK-GTTCNQRL------------EKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAE---L--- 398 (550)
T ss_dssp TT-CGGGTSSE------------EEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHH---H---
T ss_pred Cc-CCCccccc------------cccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHH---h---
Confidence 22 22334443 33455679999999999963 68999999999999999887776531 1
Q ss_pred hcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccC
Q 001557 299 VGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDAS 378 (1054)
Q Consensus 299 ~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~a 378 (1054)
..+||+||+||++++++|.++++++|+|+.+|.|+++..|+. .+.+.++.+...|+|++++.+|+.++++|
T Consensus 399 -----~~~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~----~s~~~w~e~e~~Yhfs~qftAd~iamn~a 469 (550)
T PF00862_consen 399 -----QGKPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYE----DSDLYWKEIEEKYHFSCQFTADLIAMNAA 469 (550)
T ss_dssp -----TS--SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHH----TTTTTSHHHHHHH-HHHHHHHHHHHHHHS
T ss_pred -----CCCCcEEEeccCcchHHHHHHHhhcCCceehhhhcccccccc----ccCCCHHHHHhhccchhhhhHHHHHhhcC
Confidence 156999999999999999999999999999999999998865 47778999999999999999999999999
Q ss_pred CEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCC
Q 001557 379 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHN 441 (1054)
Q Consensus 379 d~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~ 441 (1054)
|.|||||.|++..++..|+.|+.-....+.. ..+.|++++++.||+.++|||+|...|.|..
T Consensus 470 dfIItST~QEI~g~~~~~gqyes~~~ftlpg-Lyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt 531 (550)
T PF00862_consen 470 DFIITSTYQEIAGQKDTVGQYESHKAFTLPG-LYRVVNGIDVFDPKFNIVSPGADESIYFPYT 531 (550)
T ss_dssp SEEEESSHHHHHB-SSSBHTTGGGSSEEETT-TEEEEES--TT-TTEEE------TTTS--TT
T ss_pred CEEEEcchHhhcCCccccCCccchhhcchHh-HHhhhccccccCCcccccCCCCCcceecCCc
Confidence 9999999999999888777765532222222 5788999999999999999999999999865
|
4.1.13 from EC in the following reaction: |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-28 Score=280.03 Aligned_cols=355 Identities=24% Similarity=0.330 Sum_probs=259.8
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++++.. .||...++..|+++|.+. | |+|++++....... .
T Consensus 1 kIl~i~~~---------------~~g~~~~~~~l~~~L~~~-g-~~v~~~~~~~~~~~----------~----------- 42 (359)
T cd03808 1 KILHIVTV---------------DGGLYSFRLPLIKALRAA-G-YEVHVVAPPGDELE----------E----------- 42 (359)
T ss_pred CeeEEEec---------------chhHHHHHHHHHHHHHhc-C-CeeEEEecCCCccc----------c-----------
Confidence 58888852 379999999999999999 8 99999997532110 0
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHc
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 326 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~ 326 (1054)
....++.++.++..... . ..+.. +..+..+.+.+.+ .+||+||+|......++...++
T Consensus 43 --~~~~~~~~~~~~~~~~~--~---~~~~~--------~~~~~~~~~~~~~-------~~~dvv~~~~~~~~~~~~~~~~ 100 (359)
T cd03808 43 --LEALGVKVIPIPLDRRG--I---NPFKD--------LKALLRLYRLLRK-------ERPDIVHTHTPKPGILGRLAAR 100 (359)
T ss_pred --cccCCceEEeccccccc--c---ChHhH--------HHHHHHHHHHHHh-------cCCCEEEEccccchhHHHHHHH
Confidence 11247777777764310 0 00100 1112222333322 5699999998766666665555
Q ss_pred -cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 327 -ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 327 -~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
..+.+++++.|+......... . ...+... .++..++.+|.+++.|+...+.+...+...
T Consensus 101 ~~~~~~~i~~~~~~~~~~~~~~----------~--~~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~------ 160 (359)
T cd03808 101 LAGVPKVIYTVHGLGFVFTSGG----------L--KRRLYLL--LERLALRFTDKVIFQNEDDRDLALKLGIIK------ 160 (359)
T ss_pred HcCCCCEEEEecCcchhhccch----------h--HHHHHHH--HHHHHHhhccEEEEcCHHHHHHHHHhcCCC------
Confidence 456778888888654321100 0 1112222 256678899999999998877655443211
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCC
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 485 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld 485 (1054)
...++.++|+|+|...+.+.... ..++.+.|+++|++.
T Consensus 161 ---------------~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~i~~~G~~~ 198 (359)
T cd03808 161 ---------------KKKTVLIPGSGVDLDRFSPSPEP---------------------------IPEDDPVFLFVARLL 198 (359)
T ss_pred ---------------cCceEEecCCCCChhhcCccccc---------------------------cCCCCcEEEEEeccc
Confidence 01278889999998877643210 125678999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001557 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 564 (1054)
Q Consensus 486 ~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A 564 (1054)
+.||++.+++++..+.+ ..+++.+ ++|.++...... .. ++..++....|.|.|+ .+++..+|+.|
T Consensus 199 ~~k~~~~li~~~~~l~~--~~~~~~l~i~G~~~~~~~~~--------~~--~~~~~~~~~~v~~~g~--~~~~~~~~~~a 264 (359)
T cd03808 199 KDKGIDELLEAARILKA--KGPNVRLLLVGDGDEENPAA--------IL--EIEKLGLEGRVEFLGF--RDDVPELLAAA 264 (359)
T ss_pred cccCHHHHHHHHHHHHh--cCCCeEEEEEcCCCcchhhH--------HH--HHHhcCCcceEEEeec--cccHHHHHHhc
Confidence 99999999999999864 2345555 667776432211 11 3566777789999998 68999999999
Q ss_pred hcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001557 565 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNG 644 (1054)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 644 (1054)
|++|+|+..|+||++++|||+||+|||+++.|+..+++.++.+|+++++.|+++++++|.+++.+++.+.++++++
T Consensus 265 ----di~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~ 340 (359)
T cd03808 265 ----DVFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAA 340 (359)
T ss_pred ----cEEEecCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred HHHH-hcCCHHHHHHHHH
Q 001557 645 LKNI-HQFSWPEHCKSYL 661 (1054)
Q Consensus 645 ~~~v-~~fsw~~~a~~yl 661 (1054)
++.+ ++|+|+.++++|+
T Consensus 341 ~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 341 RKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHhcCHHHHHHHhh
Confidence 9997 7999999999886
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=299.94 Aligned_cols=247 Identities=20% Similarity=0.224 Sum_probs=190.3
Q ss_pred CCCEEEEEEecCCC-Ch----hhHHHHHHHH-HHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCc
Q 001557 767 RRKYVFVIAADCDT-TS----DFLEIIKKVV-EAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGS 840 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL-~~----~i~~~~~~al-~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa 840 (1054)
.++.+|++|+|||| ++ .++....+++ +++.++ |+.||+||||++..+.++++++++ ..||++||+||+
T Consensus 7 ~~~~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~----gi~fv~aTGR~~~~~~~l~~~~~l--~~p~~~I~~nGt 80 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRH----DSLLVFSTGRSPTLYKELRKEKPL--LTPDITIMSVGT 80 (413)
T ss_pred CCCEEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcC----CeeEEEEcCCCHHHHHHHHHhCCC--CCCCEEEEcCCc
Confidence 34689999999999 32 4664454554 777775 999999999999999999999988 468999999999
Q ss_pred EEEcCCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCC
Q 001557 841 ELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMI 920 (1054)
Q Consensus 841 ~I~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~ 920 (1054)
+|+|.+ .+..|..|..++...|....+.+.+..++.... +....+..+|++|+..+....
T Consensus 81 ~I~~~~---------~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~-----------q~~~~~~~~Ki~~~~~~~~~~ 140 (413)
T PLN02382 81 EIAYGE---------SMVPDHGWVEYLNKKWDREIVVEETSKFPELKL-----------QPETEQRPHKVSFYVDKKKAQ 140 (413)
T ss_pred EEEeCC---------CCccChhHHHHHhccCChhhHHHHHhcCCCccc-----------CCcccCCCeEEEEEechHHhH
Confidence 999865 455788999999999987655544444433222 223345688999987532222
Q ss_pred ccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHh---CCCccCEEEEeCcCCCccccccccCcc-e
Q 001557 921 PPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRW---GIDLSNVVVIAGECGDTDYEGLLGGVH-K 996 (1054)
Q Consensus 921 ~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~---gI~~e~vvaf~GD~~d~D~~eML~~ag-~ 996 (1054)
....++.+.+...+..+.++++++. ++||+|+++|||+||++|++++ |+++++++| +||++| | ++||+.+| +
T Consensus 141 ~~~~~l~~~~~~~g~~~~i~~s~~~-~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~ia-fGDs~N-D-leMl~~ag~~ 216 (413)
T PLN02382 141 EVIKELSERLEKRGLDVKIIYSGGI-DLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLV-CGDSGN-D-AELFSVPDVY 216 (413)
T ss_pred HHHHHHHHHHHhcCCcEEEEEECCc-EEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEE-EeCCHH-H-HHHHhcCCCC
Confidence 2344566666666678899999886 9999999999999999999999 999999999 889999 9 99999999 8
Q ss_pred EEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhcccc
Q 001557 997 TVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLK 1052 (1054)
Q Consensus 997 gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~~~~ 1052 (1054)
||||+||. .+++.+++.+ ....++++ .+.+.+++||++||+||+++.
T Consensus 217 gvam~NA~--~elk~~a~~~------~~~~~~~~-~a~~~~~~GI~~al~~f~l~~ 263 (413)
T PLN02382 217 GVMVSNAQ--EELLQWYAEN------AKDNPKII-HATERCAAGIIQAIGHFNLGP 263 (413)
T ss_pred EEEEcCCc--HHHHHHHHhh------ccCCCcEE-EcCCCCccHHHHHHHHhCCCC
Confidence 99999999 6555543321 12234444 446778999999999999874
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-30 Score=280.89 Aligned_cols=242 Identities=18% Similarity=0.241 Sum_probs=187.2
Q ss_pred CEEEEEEecCCCC------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEE
Q 001557 769 KYVFVIAADCDTT------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSEL 842 (1054)
Q Consensus 769 kkLiv~DiDGTL~------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I 842 (1054)
+.+|++|+||||. ..+++.+.+++++++++ |+.||+||||++.++..+++++++ ..|+++||+||+.|
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~----gi~fv~aTGR~~~~~~~~~~~~~~--~~p~~~I~~NGa~I 74 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGE----DSLLVYSTGRSPHSYKELQKQKPL--LTPDIWVTSVGSEI 74 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhcc----CceEEEEcCCCHHHHHHHHhcCCC--CCCCEEEEcCCceE
Confidence 3689999999993 46899999999999986 899999999999999999999988 45889999999999
Q ss_pred EcCCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCcc
Q 001557 843 YYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPP 922 (1054)
Q Consensus 843 ~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~~ 922 (1054)
++++ ....+..|..++...|..+.+......++.... ........+|++|..........
T Consensus 75 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~~~~k~~~~~~~~~~~~~ 134 (249)
T TIGR01485 75 YYGG---------AEVPDQHWAEYLSEKWQRDIVVAITDKFEELKP-----------QPDLEQRPHKVSFFLDPEAAPEV 134 (249)
T ss_pred EeCC---------CCcCCHHHHHHHhcccCHHHHHHHHhcCccccc-----------CCccccCCeeEEEEechhhhhHH
Confidence 9864 234577888888888986655444332222111 11123457888887643221223
Q ss_pred HHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccC-cceEEEec
Q 001557 923 VKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGG-VHKTVILK 1001 (1054)
Q Consensus 923 ~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~-ag~gVaMg 1001 (1054)
+.++.+.+...+..+.++++.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+. ++.+|+|+
T Consensus 135 ~~~l~~~l~~~~~~~~~~~~~~~-~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~-~GD~~N-D-~~ml~~~~~~~va~~ 210 (249)
T TIGR01485 135 IKQLTEMLKETGLDVKLIYSSGK-DLDILPQGSGKGQALQYLLQKLAMEPSQTLV-CGDSGN-D-IELFEIGSVRGVIVS 210 (249)
T ss_pred HHHHHHHHHhcCCCEEEEEECCc-eEEEEeCCCChHHHHHHHHHHcCCCccCEEE-EECChh-H-HHHHHccCCcEEEEC
Confidence 56677777776778888888875 9999999999999999999999999999999 888888 8 999997 67999999
Q ss_pred CcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhccc
Q 001557 1002 GVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVL 1051 (1054)
Q Consensus 1002 Na~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~~~ 1051 (1054)
||. .+++.... ..+.+.+ |+|+.+.++||++||+||+|+
T Consensus 211 na~--~~~k~~~~--------~~~~~~~-~~~~~~~~~Gi~e~l~~~~~~ 249 (249)
T TIGR01485 211 NAQ--EELLQWYD--------ENAKDKI-YHASERCAGGIIEAIAHFDLL 249 (249)
T ss_pred CCH--HHHHHHHH--------hcccCcE-EEecCCCcHHHHHHHHHcCCC
Confidence 998 44432221 1122333 577999999999999999985
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=281.01 Aligned_cols=283 Identities=30% Similarity=0.433 Sum_probs=227.1
Q ss_pred CcceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||+|+. ..+.++..+++..++|++++.|+......... .+.+. .++..+..+|.+++
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---------------~~~~~--~~~~~~~~~d~ii~ 154 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRK---------------RLLRA--LLRRALRRADAVIA 154 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCch---------------hhHHH--HHHHHHhcCCeEEe
Confidence 57999999975 45666777788889999999998755432110 01111 24557899999999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
.|+...+.+...+ . +..++.++|||+|...+.+.....
T Consensus 155 ~s~~~~~~~~~~~--~---------------------~~~~~~~i~~~~~~~~~~~~~~~~------------------- 192 (377)
T cd03798 155 VSEALADELKALG--I---------------------DPEKVTVIPNGVDTERFSPADRAE------------------- 192 (377)
T ss_pred CCHHHHHHHHHhc--C---------------------CCCceEEcCCCcCcccCCCcchHH-------------------
Confidence 9998877765543 1 112899999999998876432110
Q ss_pred HHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 464 SEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
. .+.....+++.|+++|++.+.||++.+++++..+... .+++.+ ++|.++. ...+..++.++++
T Consensus 193 ~--~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~--~~~~~l~i~g~~~~-----------~~~~~~~~~~~~~ 257 (377)
T cd03798 193 A--RKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKK--RPDVHLVIVGDGPL-----------REALEALAAELGL 257 (377)
T ss_pred H--HhccCCCCceEEEEeccCccccCHHHHHHHHHHHHhc--CCCeEEEEEcCCcc-----------hHHHHHHHHhcCC
Confidence 0 1122245678999999999999999999999998643 456666 6677654 2345667778888
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHH
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 622 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~ 622 (1054)
.++|.+.|+++.+++..+|+.| |++|+|+..|++|++++|||+||+|||+++.|+..+++.++.+|+++++.|+++
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~a----d~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~ 333 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAA----DVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEA 333 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhc----CeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHH
Confidence 8999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 623 IADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 623 la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
++++|.++++++.. ++..++++.+ +.|+|+.++++|.++|+++
T Consensus 334 l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 334 LAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 99999999999887 6777777777 7999999999999998753
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.1e-29 Score=281.92 Aligned_cols=261 Identities=24% Similarity=0.294 Sum_probs=203.3
Q ss_pred CcceEEEEcCCC-chHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYAD-AGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~~-a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||+|... .+......++..++|+|++.|+.+...... .+ .....|.+++
T Consensus 95 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~~----------------~~---------~~~~~d~ii~ 149 (359)
T cd03823 95 FRPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPRQ----------------GL---------FKKGGDAVIA 149 (359)
T ss_pred cCCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecchh----------------hh---------hccCCCEEEE
Confidence 569999999863 233344455667899999999875432110 00 1223399999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
+|+...+.+...... ..++.+||||+|...+.+...
T Consensus 150 ~s~~~~~~~~~~~~~-----------------------~~~~~vi~n~~~~~~~~~~~~--------------------- 185 (359)
T cd03823 150 PSRFLLDRYVANGLF-----------------------AEKISVIRNGIDLDRAKRPRR--------------------- 185 (359)
T ss_pred eCHHHHHHHHHcCCC-----------------------ccceEEecCCcChhhcccccc---------------------
Confidence 999776665433211 128999999999987764211
Q ss_pred HHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 464 SEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
....++++|+++||+.+.||++.+++++..+.+ +++.+ ++|.++..... .... +.
T Consensus 186 ------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~----~~~~l~i~G~~~~~~~~-----------~~~~---~~ 241 (359)
T cd03823 186 ------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR----GDIELVIVGNGLELEEE-----------SYEL---EG 241 (359)
T ss_pred ------CCCCCceEEEEEecCccccCHHHHHHHHHHHHh----cCcEEEEEcCchhhhHH-----------HHhh---cC
Confidence 013567789999999999999999999999853 45554 67877642221 1111 45
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC-CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHH
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ 621 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~-~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~ 621 (1054)
..+|.+.|+++.+++..+|+.| |++|+|+. .|+||++++|||+||+|||+++.|+..|++.++.+|+++++.|++
T Consensus 242 ~~~v~~~g~~~~~~~~~~~~~a----d~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~ 317 (359)
T cd03823 242 DPRVEFLGAYPQEEIDDFYAEI----DVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAE 317 (359)
T ss_pred CCeEEEeCCCCHHHHHHHHHhC----CEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHH
Confidence 6789999999999999999999 99999997 799999999999999999999999999999988899999999999
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001557 622 SIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 622 ~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
+++++|.+++++++.++++++++++.... +.++++|+++|+
T Consensus 318 ~l~~~i~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 358 (359)
T cd03823 318 DLAAALERLIDDPDLLERLRAGIEPPRSI---EDQAEEYLKLYR 358 (359)
T ss_pred HHHHHHHHHHhChHHHHHHHHhHHHhhhH---HHHHHHHHHHhh
Confidence 99999999999999999999998877643 888999988875
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-29 Score=288.65 Aligned_cols=447 Identities=20% Similarity=0.237 Sum_probs=294.4
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccc-c--c--
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNR-K--N-- 240 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~-~--~-- 240 (1054)
|||+++|.... | -.++||....+..|.++|++. | ++|.|+.+.+. .+...+....+.+.. . .
T Consensus 1 M~Il~v~~E~~----p-----~vK~GGLaDv~~alpk~L~~~-g-~~v~v~lP~y~--~~~~~~~~~~~~~~~~~~~~~~ 67 (487)
T COG0297 1 MKILFVASEIF----P-----FVKTGGLADVVGALPKALAKR-G-VDVRVLLPSYP--KVQKEWRDLLKVVGKFGVLKGG 67 (487)
T ss_pred Ccceeeeeeec----C-----ccccCcHHHHHHHhHHHHHhc-C-CeEEEEcCCch--hhhhhhccccceeeEeeeeecc
Confidence 88999987544 2 278999999999999999999 8 89999998754 221111111011000 0 0
Q ss_pred -ccccc-cccCCCCCeEEEEccCCCCCccccc--ccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCC-CCcceEEEEcCC
Q 001557 241 -TENLM-QGLGESSGAYIIRIPFGPKDKYVQK--ELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQ-PIWPVAIHGHYA 315 (1054)
Q Consensus 241 -~~~~~-~~~~~~~g~~i~rip~g~~~~~l~k--~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~-~~~pDVIh~h~~ 315 (1054)
..-+. +......++.+.-+... .+..+ ...+.+- +...++.. +.++-.+.+..+. ...|||||+|+|
T Consensus 68 ~~~~~~~~~~~~~~~v~~~lid~~---~~f~r~~~~~~~~~----d~~~Rf~~-F~~a~~~~~~~~~~~~~pDIvH~hDW 139 (487)
T COG0297 68 RAQLFIVKEYGKDGGVDLYLIDNP---ALFKRPDSTLYGYY----DNAERFAF-FSLAAAELAPLGLISWLPDIVHAHDW 139 (487)
T ss_pred cceEEEEEeecccCCCcEEEecCh---hhcCccccccCCCC----cHHHHHHH-HHHHHHHHhhhcCCCCCCCEEEeecH
Confidence 00000 00111111333333311 12222 1233332 33333332 2222223232221 146999999999
Q ss_pred CchHHHHHHHc----cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhH-----HHHHHHHHHhhhccCCEEEecCH
Q 001557 316 DAGDAAALLSG----ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYK-----IMRRIEAEELSLDASEIVITSTR 386 (1054)
Q Consensus 316 ~a~~~a~~l~~----~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~-----~~~ri~~E~~~l~~ad~Vi~~S~ 386 (1054)
.+++++.+++. ...+|.|+|+|++..+..........+.... ..|. ..-.+..++..+..||.|.++|+
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~--~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSp 217 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPF--EAYASFGLEFYGQISFLKGGLYYADAVTTVSP 217 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCH--HHhhhceeeecCcchhhhhhheeccEEEEECH
Confidence 99999999987 4589999999998766543211111111110 0111 00112335668999999999999
Q ss_pred HHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHH
Q 001557 387 QEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEI 466 (1054)
Q Consensus 387 ~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (1054)
.++.+++ ++.+...++..++.+.+ ++.-|-||||.+.+.|.....-. ..+........+.....+
T Consensus 218 tYa~Ei~--t~~~g~gl~g~l~~~~~-----------~l~GI~NgiD~~~wnp~~d~~~~--~~y~~~~~~~k~~nk~~L 282 (487)
T COG0297 218 TYAGEIY--TPEYGEGLEGLLSWRSG-----------KLSGILNGIDYDLWNPETDPYIA--ANYSAEVLPAKAENKVAL 282 (487)
T ss_pred HHHHhhc--cccccccchhhhhhccc-----------cEEEEEeeEEecccCcccccchh--ccCCccchhhhHHHHHHH
Confidence 9999987 55555555555555542 89999999999999986432100 000000000111111222
Q ss_pred -hhhcCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCC
Q 001557 467 -MHFFSN--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543 (1054)
Q Consensus 467 -~~~~~~--~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~ 543 (1054)
.++..+ .+.|++.++||+..+||++.+++|+..+.+.. ..+ +++|.++ ..+...+..+..++.-
T Consensus 283 ~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~-vilG~gd---------~~le~~~~~la~~~~~- 349 (487)
T COG0297 283 QERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQL-VLLGTGD---------PELEEALRALASRHPG- 349 (487)
T ss_pred HHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceE-EEEecCc---------HHHHHHHHHHHHhcCc-
Confidence 233333 36799999999999999999999999996532 333 4778873 3457788888888764
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceee--------CCceEEe
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--------LDNGLLV 615 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~--------~~~Gllv 615 (1054)
++...-..+..-...+|+.| |++++||++|||||+-++||++|+++|+..+||..|.|.+ ..+|+++
T Consensus 350 -~~~~~i~~~~~la~~i~aga----D~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f 424 (487)
T COG0297 350 -RVLVVIGYDEPLAHLIYAGA----DVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLF 424 (487)
T ss_pred -eEEEEeeecHHHHHHHHhcC----CEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEE
Confidence 55554444444556777877 9999999999999999999999999999999999999875 4789999
Q ss_pred CCCCHHHHHHHHHHHHh---CHHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 001557 616 DPHDQQSIADALLKLVS---DKQL-WERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQR 670 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll~---d~~~-~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~~ 670 (1054)
.+.++++++.+|.+++. .+.. |+.+..+++. ..|+|+..|.+|.+.|+.++..
T Consensus 425 ~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~ 481 (487)
T COG0297 425 LQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKPLLSK 481 (487)
T ss_pred ecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHHHHHhcc
Confidence 99999999999999987 4444 8888888887 6999999999999999998764
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=287.41 Aligned_cols=346 Identities=17% Similarity=0.166 Sum_probs=244.5
Q ss_pred ccccCCCChHHH----------HHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccC-CCCEEEEeC
Q 001557 269 QKELLWPHIPEF----------VDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGAL-NVPMVFTGH 337 (1054)
Q Consensus 269 ~k~~l~~~l~~f----------~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~-~iP~V~t~H 337 (1054)
.+..+||.+..+ ..........++.++.+.+.. -|+|.+|++...+++.++.+.. ..++.|..|
T Consensus 85 ~n~~lWPl~H~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-----~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH 159 (456)
T TIGR02400 85 SNSTLWPLFHYRPDLIRYDRKAWEAYRRVNRLFAEALAPLLQP-----GDIVWVHDYHLMLLPAMLRELGVQNKIGFFLH 159 (456)
T ss_pred hhhhcchhhcccccccccCHHHHHHHHHHHHHHHHHHHHhCCC-----CCEEEEecchhhHHHHHHHhhCCCCeEEEEEe
Confidence 456677754321 222333344456666665332 4899999988778888887654 568889999
Q ss_pred CCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHh-Hhcccc
Q 001557 338 SLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRAR-IKRGVS 416 (1054)
Q Consensus 338 ~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r-~~~gv~ 416 (1054)
-.++.. +-+ ....+.+.| -..+-.||+|.+.|..+++.+..... +.++.. ...|+.
T Consensus 160 ipfP~~-e~f------------~~lp~r~~i---l~gll~~dligF~t~~~~~~Fl~~~~-------~~l~~~~~~~~~~ 216 (456)
T TIGR02400 160 IPFPSS-EIY------------RTLPWRREL---LEGLLAYDLVGFQTYDDARNFLSAVS-------RELGLETLPNGVE 216 (456)
T ss_pred CCCCCh-HHH------------hhCCcHHHH---HHHHhcCCEEEECCHHHHHHHHHHHH-------HHhCCcccCCceE
Confidence 765533 111 011111111 23578999999999999887655321 111111 123444
Q ss_pred cCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHH
Q 001557 417 CHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKA 496 (1054)
Q Consensus 417 ~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A 496 (1054)
..|+.. ++.+||||||++.|.+..... ........++..+ +++++|+++||+++.||++.+++|
T Consensus 217 ~~g~~~-~v~viP~GID~~~f~~~~~~~-------------~~~~~~~~lr~~~--~~~~vIl~VgRLd~~KGi~~ll~A 280 (456)
T TIGR02400 217 SGGRTV-RVGAFPIGIDVDRFAEQAKKP-------------SVQKRIAELRESL--KGRKLIIGVDRLDYSKGLPERLLA 280 (456)
T ss_pred ECCcEE-EEEEecCcCCHHHHHHHhcCh-------------hHHHHHHHHHHHc--CCCeEEEEccccccccCHHHHHHH
Confidence 445554 899999999999998542110 0111112233333 578899999999999999999999
Q ss_pred HHhcccccCCC--cEEE-EE-----ecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCC
Q 001557 497 FGECRPLRELA--NLTL-IM-----GNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTK 568 (1054)
Q Consensus 497 ~~~l~~~~~~~--~l~L-Ii-----G~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~ 568 (1054)
|+.+.+.++.. +++| ++ |+++.+..++....+..++++...+..++.+.+.+.+.++.+++.++|+.|
T Consensus 281 ~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aa---- 356 (456)
T TIGR02400 281 FERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAA---- 356 (456)
T ss_pred HHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhC----
Confidence 99987555543 3444 33 344555555555555556666666667777878888999999999999999
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCC----EEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHH
Q 001557 569 GVFINPAFIEPFGLTLIEAAAYGLP----IVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQN 643 (1054)
Q Consensus 569 dv~v~ps~~Egfgl~l~EAmA~G~P----VIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~ 643 (1054)
|+||+||+.||||+|++||||||+| +|+|+.+|..+.+. +|++|+|+|++++|+||.++|+ ++++++++.+.
T Consensus 357 Dv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~ 433 (456)
T TIGR02400 357 DVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMADAIARALTMPLEEREERHRA 433 (456)
T ss_pred cEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999999999999999999 88888777777653 7999999999999999999999 55677778888
Q ss_pred HHHHHhcCCHHHHHHHHHHHHH
Q 001557 644 GLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 644 ~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
+++.+..||+..|+++|++.+.
T Consensus 434 ~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 434 MMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHHhhCCHHHHHHHHHHHhh
Confidence 8888888999999999998664
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-27 Score=274.42 Aligned_cols=332 Identities=15% Similarity=0.101 Sum_probs=221.8
Q ss_pred CcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCccccc
Q 001557 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQK 270 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k 270 (1054)
+|.+..+.+++..|+++++ ++|++++.... +... +.....|++|+++|. +....
T Consensus 15 ~g~~~r~~~~~~~l~~~~~-~~v~vi~~~~~--------~~~~-------------~~~~~~~v~v~r~~~-~~~~~--- 68 (371)
T PLN02275 15 FGRSPRMQYHALSLARQAS-FQVDVVAYGGS--------EPIP-------------ALLNHPSIHIHLMVQ-PRLLQ--- 68 (371)
T ss_pred CCCCHHHHHHHHHHHhcCC-ceEEEEEecCC--------CCCH-------------HHhcCCcEEEEECCC-ccccc---
Confidence 3555577889999998844 58999985311 1111 112345899999986 33111
Q ss_pred ccCCCChH--HHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCc---hHHHHHHHccCCCCEEEEeCCCccchHH
Q 001557 271 ELLWPHIP--EFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA---GDAAALLSGALNVPMVFTGHSLGRDKLE 345 (1054)
Q Consensus 271 ~~l~~~l~--~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a---~~~a~~l~~~~~iP~V~t~H~l~~~~~~ 345 (1054)
.+...+. .+.......+..+.+.+.. +..+||+||+|.... ..++.++++..++|+|+|.|+++..
T Consensus 69 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--- 139 (371)
T PLN02275 69 -RLPRVLYALALLLKVAIQFLMLLWFLCV-----KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--- 139 (371)
T ss_pred -ccccchHHHHHHHHHHHHHHHHHHHHHh-----hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH---
Confidence 1112221 0111111111222222111 125699999987432 3456667777899999999997521
Q ss_pred HHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcE
Q 001557 346 QLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRM 425 (1054)
Q Consensus 346 ~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv 425 (1054)
....|.... ...+++.+++ |+..++.+|.|+++|+...+.+.+.+.. ++
T Consensus 140 -~~~~~~~~~---~~~~~~~~~~--e~~~~~~ad~ii~~S~~~~~~l~~~~g~-------------------------~i 188 (371)
T PLN02275 140 -LLALSLGRS---HPLVRLYRWY--ERHYGKMADGHLCVTKAMQHELDQNWGI-------------------------RA 188 (371)
T ss_pred -HHhcccCCC---CHHHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHHhcCC-------------------------Ce
Confidence 111121111 1122344443 7778999999999999887765332211 37
Q ss_pred EEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc--
Q 001557 426 VVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPL-- 503 (1054)
Q Consensus 426 ~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~-- 503 (1054)
.+||||+ .+.|.|..... ....+...+|+++||+.+.||++.+++|+..+...
T Consensus 189 ~vi~n~~-~~~f~~~~~~~------------------------~~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~ 243 (371)
T PLN02275 189 TVLYDQP-PEFFRPASLEI------------------------RLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVA 243 (371)
T ss_pred EEECCCC-HHHcCcCCchh------------------------cccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhh
Confidence 8999995 46665432100 00113345788999999999999999999877311
Q ss_pred -------------cCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEe-CCCCCCCcHHHHHHHhhcCC
Q 001557 504 -------------RELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTK 568 (1054)
Q Consensus 504 -------------~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~-~g~~~~~dl~~ly~~Aa~~~ 568 (1054)
...+++.| |+|+|+. ..+++++++++++.+ +.| .++++.++++.+|+.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~a---- 307 (371)
T PLN02275 244 ARLNESDSASGKQSLYPRLLFIITGKGPQ-----------KAMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGSA---- 307 (371)
T ss_pred hccccccccccccccCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHhC----
Confidence 12356665 7899986 456778889999977 665 5578999999999999
Q ss_pred cEEEecC---CCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHH
Q 001557 569 GVFINPA---FIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLV 631 (1054)
Q Consensus 569 dv~v~ps---~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1054)
|++|+|+ ..|+||++++||||||+|||+++.||..|+|.++.+|++++ |+++++++|.++|
T Consensus 308 Dv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 308 DLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred CEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 9999863 24899999999999999999999999999999999999996 7999999998874
|
|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-28 Score=282.51 Aligned_cols=276 Identities=17% Similarity=0.240 Sum_probs=218.3
Q ss_pred CcceEEEEcCCC-chHHHHHHHccCCCC-EEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEE
Q 001557 305 IWPVAIHGHYAD-AGDAAALLSGALNVP-MVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVI 382 (1054)
Q Consensus 305 ~~pDVIh~h~~~-a~~~a~~l~~~~~iP-~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi 382 (1054)
..+|++|+++.. .++.+..+.+..+.+ +|.+.|+..... .. ....+... .+.+++.+|.|+
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--~~----------~~~~~~~~-----~~~~~~~~d~ii 188 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--DR----------YPSGYIPL-----RRYLLSSLDAVF 188 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--hh----------ccccchHH-----HHHHHhcCCEEE
Confidence 457899997653 344455566666666 999999753211 00 00011111 233588999999
Q ss_pred ecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
++|+...+.+...|+.. ..++.++|+|++...+.+..
T Consensus 189 ~~S~~~~~~l~~~~~~~----------------------~~ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 189 PCSEQGRNYLQKRYPAY----------------------KEKIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred ECCHHHHHHHHHHCCCc----------------------cccEEEEECCcccccccCCC---------------------
Confidence 99999888776666432 23889999999987665320
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcC
Q 001557 463 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYD 541 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~ 541 (1054)
...+.+.|+++||+.+.||++.+++|+..+.+..+..++.+ ++|+++. ...+.+++...+
T Consensus 226 --------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-----------~~~l~~~~~~~~ 286 (407)
T cd04946 226 --------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-----------EDTLKELAESKP 286 (407)
T ss_pred --------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-----------HHHHHHHHHhcC
Confidence 02456789999999999999999999999976555556665 6788764 345667777777
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCC-CH
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPH-DQ 620 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~-d~ 620 (1054)
..++|.|+|+++.+++..+|+.+ ..|+|++||..||||++++||||||+|||+|+.||..|++.++.+|+++++. |+
T Consensus 287 ~~~~V~f~G~v~~~e~~~~~~~~--~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 287 ENISVNFTGELSNSEVYKLYKEN--PVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred CCceEEEecCCChHHHHHHHhhc--CCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 78899999999999999999863 1189999999999999999999999999999999999999998899999864 89
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHH
Q 001557 621 QSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYL 661 (1054)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl 661 (1054)
++++++|.++++|++++++|+++|++.+ ++|||+...++|+
T Consensus 365 ~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999999999999999999999999999 7999999998885
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-29 Score=269.82 Aligned_cols=233 Identities=21% Similarity=0.370 Sum_probs=177.5
Q ss_pred EEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCC
Q 001557 771 VFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSS 847 (1054)
Q Consensus 771 Liv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~ 847 (1054)
||++|+|||| ++.+++.+ ++++ +++ .|+.|++||||++.++.++++.+++. .||++||+||+.|++..
T Consensus 1 li~~DlDgTLl~~~~~~~~~~-~~~~-~~~----~gi~~viaTGR~~~~v~~~~~~l~l~--~~~~~I~~nGa~i~~~~- 71 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFV-ELLR-GSG----DAVGFGIATGRSVESAKSRYAKLNLP--SPDVLIARVGTEIYYGP- 71 (236)
T ss_pred CeEEeccccccCCHHHHHHHH-HHHH-hcC----CCceEEEEeCCCHHHHHHHHHhCCCC--CCCEEEECCCceEEeCC-
Confidence 5899999999 35577666 6776 455 48999999999999999999999983 57899999999998754
Q ss_pred CCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCccHHHHH
Q 001557 848 STEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELR 927 (1054)
Q Consensus 848 ~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~~~~el~ 927 (1054)
....+..|..++...|..+.+...+..+++... +.......++++|... ++....+.++.
T Consensus 72 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~i~~~~~-~~~~~~~~~~~ 131 (236)
T TIGR02471 72 --------ELQPDRFWQKHIDHDWRRQAVVEALADIPGLTL-----------QDDQEQGPFKISYLLD-PEGEPILPQIR 131 (236)
T ss_pred --------CCCCChhHHHHHhcCCCHHHHHHHHhcCCCcEe-----------CChhcCCCeeEEEEEC-cccchHHHHHH
Confidence 223355576677777876655544433333221 1122234678888763 43334456777
Q ss_pred HHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchhH
Q 001557 928 KLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESA 1007 (1054)
Q Consensus 928 ~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~ 1007 (1054)
+.+...+..+.++.+++. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+.+|+||+|+||. .
T Consensus 132 ~~l~~~~~~~~~~~~~~~-~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~-~GD~~n-D-~~ml~~~~~~iav~na~--~ 205 (236)
T TIGR02471 132 QRLRQQSQAAKVILSCGW-FLDVLPLRASKGLALRYLSYRWGLPLEQILV-AGDSGN-D-EEMLRGLTLGVVVGNHD--P 205 (236)
T ss_pred HHHHhccCCEEEEEECCc-eEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-EcCCcc-H-HHHHcCCCcEEEEcCCc--H
Confidence 777776677788888875 8999999999999999999999999999988 888888 8 99999999999999998 4
Q ss_pred HhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhcc
Q 001557 1008 RKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGV 1050 (1054)
Q Consensus 1008 ~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~~ 1050 (1054)
+++..++. ...++|.+..++||+++|+||++
T Consensus 206 ~~k~~a~~------------~~~~v~~~~~~~Gv~~~i~~~~~ 236 (236)
T TIGR02471 206 ELEGLRHQ------------QRIYFANNPHAFGILEGINHYDF 236 (236)
T ss_pred HHHHhhcC------------CcEEEcCCCChhHHHHHHHhhCC
Confidence 44443331 12257788899999999999985
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-27 Score=264.72 Aligned_cols=267 Identities=25% Similarity=0.293 Sum_probs=208.2
Q ss_pred CcceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||+|.. ....++....+. ++|+|++.|+.......... . .. ..+...+..+|.+++
T Consensus 80 ~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~------~-----~~------~~~~~~~~~~d~ii~ 141 (353)
T cd03811 80 EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKRKL------R-----LL------LLIRKLYRRADKIVA 141 (353)
T ss_pred cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhccch------h-----HH------HHHHhhccccceEEE
Confidence 46999999987 444454444444 89999999998654422110 0 00 124557899999999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
.|+...+.+...+.. +..++.+||||+|...+.+..... .
T Consensus 142 ~s~~~~~~~~~~~~~----------------------~~~~~~vi~~~~~~~~~~~~~~~~-----------------~- 181 (353)
T cd03811 142 VSEGVKEDLLKLLGI----------------------PPDKIEVIYNPIDIEEIRALAEEP-----------------L- 181 (353)
T ss_pred eccchhhhHHHhhcC----------------------CccccEEecCCcChhhcCcccchh-----------------h-
Confidence 999888776665542 112899999999998776432110 0
Q ss_pred HHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 464 SEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
......++++|+++||+.+.||++.+++|+..+... .+++.+ ++|+++. ...+.+++.++++
T Consensus 182 ----~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~ 244 (353)
T cd03811 182 ----ELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKE--GPDARLVILGDGPL-----------REELEALAKELGL 244 (353)
T ss_pred ----hcCCCCCceEEEEEecchhhcChHHHHHHHHHhhhc--CCCceEEEEcCCcc-----------HHHHHHHHHhcCC
Confidence 112245678999999999999999999999999643 345554 6787664 3445578888899
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHH
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 622 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~ 622 (1054)
.++|.+.|. .+++..+|+.| |++|+||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|.++
T Consensus 245 ~~~v~~~g~--~~~~~~~~~~~----d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~ 318 (353)
T cd03811 245 ADRVHFLGF--QSNPYPYLKAA----DLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAA 318 (353)
T ss_pred CccEEEecc--cCCHHHHHHhC----CEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHH
Confidence 999999998 46899999999 999999999999999999999999999999999999999999999999999999
Q ss_pred H---HHHHHHHHhCHHHHHHHHHHHHHHH-hcCC
Q 001557 623 I---ADALLKLVSDKQLWERCRQNGLKNI-HQFS 652 (1054)
Q Consensus 623 l---a~aI~~ll~d~~~~~~~~~~~~~~v-~~fs 652 (1054)
+ +.+|..++.+++.++++++++++.+ ++|+
T Consensus 319 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 319 LAAAALALLDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred HHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 9 7778788889999999999777777 5665
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-27 Score=270.64 Aligned_cols=265 Identities=19% Similarity=0.231 Sum_probs=196.7
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchH---HHHHH-hCCCChhhhhhHhHHHHHHHHHHhhhccCCE
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKL---EQLLK-QGRLSRDEINTTYKIMRRIEAEELSLDASEI 380 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~---~~l~~-~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~ 380 (1054)
.+||+||++.... +..+....++|.++++|+..+..+ ..+.. .+...........+..++ .|..+++.+|.
T Consensus 82 ~~~D~v~~~~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~ 156 (351)
T cd03804 82 SGYDLVISSSHAV---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRI--WDRRSAARVDY 156 (351)
T ss_pred cCCCEEEEcCcHH---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHH--HHHHHhcCCCE
Confidence 4699999886422 222225568999999997432111 11111 111111111112222333 36678999999
Q ss_pred EEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCC
Q 001557 381 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDP 460 (1054)
Q Consensus 381 Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~ 460 (1054)
|+++|+...+.+.+.+.. +..+||||+|.+.|.+..
T Consensus 157 ii~~S~~~~~~~~~~~~~-------------------------~~~vi~~~~d~~~~~~~~------------------- 192 (351)
T cd03804 157 FIANSRFVARRIKKYYGR-------------------------DATVIYPPVDTDRFTPAE------------------- 192 (351)
T ss_pred EEECCHHHHHHHHHHhCC-------------------------CcEEECCCCCHhhcCcCC-------------------
Confidence 999999888876554432 568999999998776421
Q ss_pred chhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHc
Q 001557 461 PIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY 540 (1054)
Q Consensus 461 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~ 540 (1054)
...+.++++||+.+.||++.+++|+..+. ..+ +|+|+++..+ .+.+
T Consensus 193 ------------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l-~ivG~g~~~~-----------~l~~----- 238 (351)
T cd03804 193 ------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRL-VVIGDGPELD-----------RLRA----- 238 (351)
T ss_pred ------------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcE-EEEECChhHH-----------HHHh-----
Confidence 23567999999999999999999999873 233 4778876422 2222
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCH
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 620 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~ 620 (1054)
+..++|.|+|+++.+++..+|+.| |++|+|+. |+||++++||||||+|||+++.||..|++.++.+|++++|.|+
T Consensus 239 ~~~~~V~~~g~~~~~~~~~~~~~a----d~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 239 KAGPNVTFLGRVSDEELRDLYARA----RAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred hcCCCEEEecCCCHHHHHHHHHhC----CEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 345789999999999999999999 99999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 001557 621 QSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 660 (1054)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~y 660 (1054)
++++++|.+++++++ .+++++.+.++.|+|+.+.+++
T Consensus 314 ~~la~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFEKNED---FDPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHHhCcc---cCHHHHHHHHHhcCHHHHHHHh
Confidence 999999999999884 2344555556789999988765
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-27 Score=281.97 Aligned_cols=279 Identities=17% Similarity=0.200 Sum_probs=210.5
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhh--hhhHhHHHHHHHHHHhhhccCCEEE
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDE--INTTYKIMRRIEAEELSLDASEIVI 382 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~--i~~~~~~~~ri~~E~~~l~~ad~Vi 382 (1054)
.++||+|++.......+ .+.....+|.++++|+-..... ...... +...|... ....+.+|.||
T Consensus 210 ~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~-------~~~~~~~~~~~~y~~~------~~~~~~~D~iI 275 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSES-------ATNETYILWNNYYEYQ------FSNADYIDFFI 275 (500)
T ss_pred CCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCc-------cCcchhHHHHHHHHHH------HhchhhCCEEE
Confidence 45899999875432222 3345568999999997432211 000000 11111111 12467789999
Q ss_pred ecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
++|+...+.+...++.. +...+++.+||+|++...+.+..
T Consensus 276 ~~S~~~~~~l~~~~~~~-------------------~~~~~ki~viP~g~~~~~~~~~~--------------------- 315 (500)
T TIGR02918 276 TATDIQNQILKNQFKKY-------------------YNIEPRIYTIPVGSLDELQYPEQ--------------------- 315 (500)
T ss_pred ECCHHHHHHHHHHhhhh-------------------cCCCCcEEEEcCCCcccccCccc---------------------
Confidence 99998776655544321 11223899999998654433210
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcC
Q 001557 463 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYD 541 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~ 541 (1054)
......|+++||+.+.||++.+|+|+..+.+ ..|++.| |+|+++. ...+.+++.+++
T Consensus 316 ---------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~--~~p~~~l~i~G~G~~-----------~~~l~~~i~~~~ 373 (500)
T TIGR02918 316 ---------ERKPFSIITASRLAKEKHIDWLVKAVVKAKK--SVPELTFDIYGEGGE-----------KQKLQKIINENQ 373 (500)
T ss_pred ---------ccCCeEEEEEeccccccCHHHHHHHHHHHHh--hCCCeEEEEEECchh-----------HHHHHHHHHHcC
Confidence 1234579999999999999999999999864 3456665 7788764 356778899999
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcccc-CcccceeeCCceEEeCCC--
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG-GPVDIHRVLDNGLLVDPH-- 618 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~G-g~~eiv~~~~~Gllv~p~-- 618 (1054)
+.+.|.|.|+. ++.++|+.| |++|+||..||||++++||||||+|||+++.+ |++|+|.++.+|+++++.
T Consensus 374 l~~~V~f~G~~---~~~~~~~~a----dv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~ 446 (500)
T TIGR02918 374 AQDYIHLKGHR---NLSEVYKDY----ELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEE 446 (500)
T ss_pred CCCeEEEcCCC---CHHHHHHhC----CEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCcc
Confidence 99999999963 799999999 99999999999999999999999999999985 899999999999999743
Q ss_pred --C----HHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 001557 619 --D----QQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 619 --d----~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~ 667 (1054)
| ++++|++|.++++ ++.++++++++++.++.|||+..+++|.++++++
T Consensus 447 ~~d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 447 EDDEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred ccchhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 3 8899999999995 5578999999999889999999999999998753
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=272.53 Aligned_cols=234 Identities=18% Similarity=0.135 Sum_probs=159.9
Q ss_pred CCEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEc
Q 001557 768 RKYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYY 844 (1054)
Q Consensus 768 ~kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~ 844 (1054)
..|+|++|+|||| ++.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||+.|++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~----g~~v~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~ 73 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKTISPETKEALARLREK----GVKVVLATGRPLPDVLSILEELGLD----GPLITFNGALIYN 73 (264)
T ss_pred CeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCC----ccEEEeCCeEEec
Confidence 3599999999999 467999999999999987 9999999999999999999999984 3799999999998
Q ss_pred CCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhh---c---cCCCCcc----C-------------cccccc
Q 001557 845 PSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAAS---V---NDKKGEE----G-------------KIVEED 901 (1054)
Q Consensus 845 ~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~---~---~~~~~~~----~-------------~~v~~~ 901 (1054)
.+ +.+ ....+..+.+..++...... . ....... . ......
T Consensus 74 ~~---------~~i--------~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (264)
T COG0561 74 GG---------ELL--------FQKPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGRE 136 (264)
T ss_pred CC---------cEE--------eeecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccc
Confidence 73 121 11222333333332221110 0 0000000 0 000000
Q ss_pred cccCcceEEEEEecCCCCCccHHHHHHHHHHhcC--eEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEe
Q 001557 902 ESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQAL--RCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIA 979 (1054)
Q Consensus 902 ~~~~~~~kis~~~~~~~~~~~~~el~~~l~~~~~--~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~ 979 (1054)
.......++...... .....++.+.+..... ...+..+.+. ++||+|+++|||.||++|+++||++++++|| |
T Consensus 137 ~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~s~~~-~lei~~~g~~K~~al~~l~~~lgi~~~~v~a-f 211 (264)
T COG0561 137 AAELEDNKIIALDKD---HEILEELVEALRKRFPDLGLTVSSSGPI-SLDITPKGVSKGYALQRLAKLLGIKLEEVIA-F 211 (264)
T ss_pred hhhcCcceEEEEecC---hHhHHHHHHHHhhhccccceEEEEcCCc-eEEEecCCCchHHHHHHHHHHhCCCHHHeEE-e
Confidence 000000111111111 1234555555555433 2333444443 5999999999999999999999999999999 8
Q ss_pred CcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhccc
Q 001557 980 GECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVL 1051 (1054)
Q Consensus 980 GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~~~ 1051 (1054)
||+.| | ++||+.+|+|||||||. .+++ ..+.++|.+.+++||+++|+++.++
T Consensus 212 GD~~N-D-~~Ml~~ag~gvam~Na~--~~~k----------------~~A~~vt~~n~~~Gv~~~l~~~~~~ 263 (264)
T COG0561 212 GDSTN-D-IEMLEVAGLGVAMGNAD--EELK----------------ELADYVTTSNDEDGVAEALEKLLLL 263 (264)
T ss_pred CCccc-c-HHHHHhcCeeeeccCCC--HHHH----------------hhCCcccCCccchHHHHHHHHHhcc
Confidence 88888 8 99999999999999998 3333 3334889999999999999998764
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=273.16 Aligned_cols=244 Identities=14% Similarity=0.099 Sum_probs=160.6
Q ss_pred CEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
.|||++|+|||| ++.+++.++++|++++++ |+.|+|||||++.++.++++.++++ +++||+||+.|+..
T Consensus 2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~~ 73 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTAR----GIHFVFATGRHHVDVGQIRDNLEIK----SYMITSNGARVHDT 73 (266)
T ss_pred ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CeEEEcCCcEEECC
Confidence 489999999999 467999999999999997 9999999999999999999999983 47899999999964
Q ss_pred CCCCC--CCCC-------CccccC-ccc--hhhhccccCh----hhHHHHHHHhhhhccCCCCccCcccccccccCcceE
Q 001557 846 SSSTE--DNHG-------LPFLVD-LDY--RFHTEYRWGG----EGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHC 909 (1054)
Q Consensus 846 ~~~~~--~~~~-------~~~~~d-~~~--~~~i~~~w~~----e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~k 909 (1054)
.+..- .... +.+... ... .......|.. .......... ..... .............|
T Consensus 74 ~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~i~k 146 (266)
T PRK10976 74 DGNLIFSHNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEA---VFKYQ----LYEPGLLEPDGVSK 146 (266)
T ss_pred CCCEehhhcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhc---CCcce----eechhhcccCCceE
Confidence 32110 0000 000000 000 0000001100 0000000000 00000 00000001112445
Q ss_pred EEEEecCCCCCccHHHHHHHHHHh-cCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCcccc
Q 001557 910 YAFEVTNPQMIPPVKELRKLMRIQ-ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYE 988 (1054)
Q Consensus 910 is~~~~~~~~~~~~~el~~~l~~~-~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~ 988 (1054)
+.+...++ ..+.++.+.+... +..+.++.+.+. ++||+|+++|||.||++|++++||++++++| +||+.| | +
T Consensus 147 i~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~lgi~~~~via-fGD~~N-D-i 219 (266)
T PRK10976 147 VFFTCDSH---EKLLPLEQAINARWGDRVNVSFSTLT-CLEVMAGGVSKGHALEAVAKKLGYSLKDCIA-FGDGMN-D-A 219 (266)
T ss_pred EEEEcCCH---HHHHHHHHHHHHHhCCcEEEEEeCCc-eEEEEcCCCChHHHHHHHHHHcCCCHHHeEE-EcCCcc-c-H
Confidence 54443221 2334555555443 345777777775 9999999999999999999999999999999 888989 8 9
Q ss_pred ccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhcc
Q 001557 989 GLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGV 1050 (1054)
Q Consensus 989 eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~~ 1050 (1054)
+||+.+|+||||+||. .+++..++ ..++|.++++||++++|++|.+
T Consensus 220 ~Ml~~ag~~vAm~NA~--~~vK~~A~--------------~~~v~~~n~edGVa~~l~~~~~ 265 (266)
T PRK10976 220 EMLSMAGKGCIMGNAH--QRLKDLLP--------------ELEVIGSNADDAVPHYLRKLYL 265 (266)
T ss_pred HHHHHcCCCeeecCCc--HHHHHhCC--------------CCeecccCchHHHHHHHHHHhh
Confidence 9999999999999999 44444332 1157789999999999999854
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=271.61 Aligned_cols=242 Identities=15% Similarity=0.155 Sum_probs=160.6
Q ss_pred CEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
.|||++|+|||| ++.+++.++++|++++++ |+.|+|||||++.++.+++++++++ +++||+||+.|+..
T Consensus 2 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~I~~~ 73 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDHHLGEKTLSTLARLRER----DITLTFATGRHVLEMQHILGALSLD----AYLITGNGTRVHSL 73 (272)
T ss_pred ccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCCC----CcEEecCCcEEEcC
Confidence 489999999999 467999999999999997 9999999999999999999999984 47999999999964
Q ss_pred CCCCC--CCCC-------CccccCcc--chhhhccccC----hhhHHHHHHHhhhhccCCCCccCcccccccccCcceEE
Q 001557 846 SSSTE--DNHG-------LPFLVDLD--YRFHTEYRWG----GEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCY 910 (1054)
Q Consensus 846 ~~~~~--~~~~-------~~~~~d~~--~~~~i~~~w~----~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ki 910 (1054)
.+..- .... +....... +.......|. ........ ......... .. .........+|+
T Consensus 74 ~~~~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~-~~~~~~~~~~ki 146 (272)
T PRK15126 74 EGELLHRQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAH-VYSGFRYQL-----ID-LKRLPAHGVTKI 146 (272)
T ss_pred CCCEEEeecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHH-HhcCCceEE-----ec-HHHccccCceEE
Confidence 32110 0000 00000000 0000000010 00000000 000000000 00 000011234566
Q ss_pred EEEecCCCCCccHHHHHHHHHHh-cCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccc
Q 001557 911 AFEVTNPQMIPPVKELRKLMRIQ-ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEG 989 (1054)
Q Consensus 911 s~~~~~~~~~~~~~el~~~l~~~-~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~e 989 (1054)
.+.. ++ ..++++.+.+... ...+.+++|.+. ++||+|+++|||+||++|++++||++++++| |||+.| | ++
T Consensus 147 ~~~~-~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~g~sKg~al~~l~~~~gi~~~~v~a-fGD~~N-D-i~ 218 (272)
T PRK15126 147 CFCG-DH---DDLTRLQIQLNEALGERAHLCFSATD-CLEVLPVGCNKGAALAVLSQHLGLSLADCMA-FGDAMN-D-RE 218 (272)
T ss_pred EEEC-CH---HHHHHHHHHHHHHhcCCEEEEEcCCc-EEEeecCCCChHHHHHHHHHHhCCCHHHeEE-ecCCHH-H-HH
Confidence 5442 22 2345666666543 345777777775 9999999999999999999999999999999 888989 8 99
Q ss_pred cccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhc
Q 001557 990 LLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 990 ML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 1049 (1054)
||+.+|+||||+||. .+++..++ .+ .+|.++++|||+++|+++-
T Consensus 219 Ml~~ag~~vAm~Na~--~~vK~~A~-------------~~-~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 219 MLGSVGRGFIMGNAM--PQLRAELP-------------HL-PVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred HHHHcCCceeccCCh--HHHHHhCC-------------CC-eecCCCcchHHHHHHHHHh
Confidence 999999999999998 55555444 11 2667999999999999874
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=272.88 Aligned_cols=245 Identities=13% Similarity=0.084 Sum_probs=159.5
Q ss_pred CEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
.|||++|+|||| ++.+++.++++|++++++ |+.|+|||||++.++.++++++++.. ..+++||+||+.|++.
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~~-~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDHTISPAVKQAIAAARAK----GVNVVLTTGRPYAGVHRYLKELHMEQ-PGDYCITNNGALVQKA 77 (270)
T ss_pred eEEEEEecCCcCcCCCCccCHHHHHHHHHHHHC----CCEEEEecCCChHHHHHHHHHhCCCC-CCCeEEEcCCeEEEEC
Confidence 589999999999 467999999999999997 99999999999999999999999841 1358999999999963
Q ss_pred C-CCC--CCCCCC-------ccccCccchhhh--ccccC-----hhhHHHHHHHhhhhccCCCCccCcccccccccCcce
Q 001557 846 S-SST--EDNHGL-------PFLVDLDYRFHT--EYRWG-----GEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIH 908 (1054)
Q Consensus 846 ~-~~~--~~~~~~-------~~~~d~~~~~~i--~~~w~-----~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 908 (1054)
. +.. ...... .+.........+ ...+. ...... ...... ...... ..+.+-.......
T Consensus 78 ~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~---~~~~~~~~~~~~~ 152 (270)
T PRK10513 78 ADGETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTV-HESFLT-GIPLVF---REVEKMDPNLQFP 152 (270)
T ss_pred CCCCEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHH-Hhhhhc-cCCccc---cchhhccccCCce
Confidence 2 110 000000 000000000000 00000 000000 000000 000000 0000000011234
Q ss_pred EEEEEecCCCCCccHHHHHHHHHHh-cCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccc
Q 001557 909 CYAFEVTNPQMIPPVKELRKLMRIQ-ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDY 987 (1054)
Q Consensus 909 kis~~~~~~~~~~~~~el~~~l~~~-~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~ 987 (1054)
|+.+. ..+ ..+.++.+.+... ...+.++.+.+. ++||+|+++|||+||++|++++||++++++| +||+.| |
T Consensus 153 k~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~~gi~~~~v~a-fGD~~N-D- 224 (270)
T PRK10513 153 KVMMI-DEP---EILDAAIARIPAEVKERYTVLKSAPY-FLEILDKRVNKGTGVKSLAEHLGIKPEEVMA-IGDQEN-D- 224 (270)
T ss_pred EEEEe-CCH---HHHHHHHHHhHHHhcCcEEEEEecCe-eEEEeCCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-
Confidence 44432 211 1234444444332 345777788775 9999999999999999999999999999999 888888 8
Q ss_pred cccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhc
Q 001557 988 EGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 988 ~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 1049 (1054)
++||+.+|+||||+||. .+++..++ +||.+++++||+++|+++.
T Consensus 225 i~Ml~~ag~~vAm~NA~--~~vK~~A~----------------~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 225 IAMIEYAGVGVAMGNAI--PSVKEVAQ----------------FVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHHHHhCCceEEecCcc--HHHHHhcC----------------eeccCCCcchHHHHHHHHh
Confidence 99999999999999999 44444444 8999999999999999975
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-26 Score=268.96 Aligned_cols=374 Identities=16% Similarity=0.154 Sum_probs=238.4
Q ss_pred ceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccC------Cccccccc
Q 001557 165 KLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYA------EPSEMLNR 238 (1054)
Q Consensus 165 ~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~------~~~~~l~~ 238 (1054)
+-.|.+++.-.+ |. -||-.+.-.. =|-.|++.++ ++|+++.+=....+..-.|+ .|.+...-
T Consensus 322 ~r~~~ivTtAsl--------PW--mTGtavnpL~-rAayLa~~~~-~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ 389 (794)
T PLN02501 322 KRHVAIVTTASL--------PW--MTGTAVNPLF-RAAYLAKSAK-QNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESY 389 (794)
T ss_pred CCeEEEEEcccC--------cc--cccccccHHH-HHHHhcccCC-ceEEEEEecCCccccccccCCCcccCCHHHHHHH
Confidence 346888887544 22 4555554433 4667898866 99999986433212111222 11111000
Q ss_pred -ccccccccccCCCCCeEEEEccCCCCCcc-cccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCC-
Q 001557 239 -KNTENLMQGLGESSGAYIIRIPFGPKDKY-VQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA- 315 (1054)
Q Consensus 239 -~~~~~~~~~~~~~~g~~i~rip~g~~~~~-l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~- 315 (1054)
..+ +.+.++-..+..|...|- +| ..+..+.|- .. +.+.|. .+.|||||.+.+
T Consensus 390 ir~w--l~~r~g~~~~~~i~fYpg----~~~~~~~SI~p~-----gd-------I~~~L~-------~f~PDVVHLatP~ 444 (794)
T PLN02501 390 IRNW--LEERIGFKADFKISFYPG----KFSKERRSIIPA-----GD-------TSQFIP-------SKDADIAILEEPE 444 (794)
T ss_pred HHHH--HHHhcCCCCCceEEeecc----hhccCCccccch-----HH-------HHHHhh-------ccCCCEEEECCch
Confidence 000 112233344555555443 22 223333332 11 112222 267999999986
Q ss_pred CchHH--HHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhc-cCCEEEecCHHHHHHH
Q 001557 316 DAGDA--AALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLD-ASEIVITSTRQEIEEQ 392 (1054)
Q Consensus 316 ~a~~~--a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~-~ad~Vi~~S~~~~~~~ 392 (1054)
..|+. +...+++++ |+|.++|.-...++... ..|.+. ...+++++++ ..+ +||.|+++|.... .+
T Consensus 445 ~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~y-~~g~L~----~~llk~l~~~-----v~r~hcD~VIaPS~atq-~L 512 (794)
T PLN02501 445 HLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKRE-KNGALQ----AFFVKHINNW-----VTRAYCHKVLRLSAATQ-DL 512 (794)
T ss_pred hhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHh-cchhHH----HHHHHHHHHH-----HHHhhCCEEEcCCHHHH-Hh
Confidence 45666 788888889 99999998766544332 112111 1111122221 111 2899999996544 21
Q ss_pred HhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCC
Q 001557 393 WRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSN 472 (1054)
Q Consensus 393 ~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (1054)
.. ++....+|||.+.|.|..... ...++...
T Consensus 513 ----~~-------------------------~vI~nVnGVDte~F~P~~r~~--------------------~~r~lgi~ 543 (794)
T PLN02501 513 ----PK-------------------------SVICNVHGVNPKFLKIGEKVA--------------------EERELGQQ 543 (794)
T ss_pred ----cc-------------------------cceeecccccccccCCcchhH--------------------HHHhcCCc
Confidence 10 222222699999998753210 11222222
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 473 PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 473 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
...+.++|+||+.+.||++.||+|+..+.. ..+++.| |+|+|++ ...+.+++.++++ .|.|+|.
T Consensus 544 ~~~kgiLfVGRLa~EKGld~LLeAla~L~~--~~pnvrLvIVGDGP~-----------reeLe~la~eLgL--~V~FLG~ 608 (794)
T PLN02501 544 AFSKGAYFLGKMVWAKGYRELIDLLAKHKN--ELDGFNLDVFGNGED-----------AHEVQRAAKRLDL--NLNFLKG 608 (794)
T ss_pred cccCceEEEEcccccCCHHHHHHHHHHHHh--hCCCeEEEEEcCCcc-----------HHHHHHHHHHcCC--EEEecCC
Confidence 334568999999999999999999998853 3356665 8899986 3456677777776 4889888
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHH
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLV 631 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1054)
.+++..+|+.+ ||||+||..|+||++++||||||+|||+++.||. +++.++.+|+++ .|+++++++|.+++
T Consensus 609 --~dd~~~lyasa----DVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI~~LL 679 (794)
T PLN02501 609 --RDHADDSLHGY----KVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKVKEAL 679 (794)
T ss_pred --CCCHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHHHHHH
Confidence 45677899999 9999999999999999999999999999999985 446677788876 59999999999999
Q ss_pred hCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001557 632 SDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 632 ~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
+++.....+. ....|||+..++++++.-+
T Consensus 680 sd~~~rl~~~-----a~~~~SWeAaadrLle~~~ 708 (794)
T PLN02501 680 ANEPQPLTPE-----QRYNLSWEAATQRFMEYSD 708 (794)
T ss_pred hCchhhhHHH-----HHhhCCHHHHHHHHHHhhc
Confidence 9876443222 1348999999999987654
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=269.18 Aligned_cols=325 Identities=17% Similarity=0.212 Sum_probs=213.5
Q ss_pred CcceEEEEcCCCchHHHHHHH-ccCCCCEEEEeCCCccchHHHHHHhCC---------CChhhhhhHhHHHHHHHHHHhh
Q 001557 305 IWPVAIHGHYADAGDAAALLS-GALNVPMVFTGHSLGRDKLEQLLKQGR---------LSRDEINTTYKIMRRIEAEELS 374 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~-~~~~iP~V~t~H~l~~~~~~~l~~~g~---------~~~~~i~~~~~~~~ri~~E~~~ 374 (1054)
..+||+|+|.|.++..+..++ +..++|+|+|.|....... +..|. +........+.+..+...|+.+
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~---l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~a 223 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRY---LCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAA 223 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccc---cccCCcccchhhhhcchhhhhhcccchHHHHHHHHH
Confidence 569999999999999999998 6689999999997643221 11111 0011111223455666679999
Q ss_pred hccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCC
Q 001557 375 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGS 454 (1054)
Q Consensus 375 l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~ 454 (1054)
...||.|+++|+.+..+...+|+. +. .. |||||+|...|.+.... ++.
T Consensus 224 a~~Ad~fttVS~it~~E~~~Ll~~----------------------~p-d~-ViPNGid~~~f~~~~e~--------~~~ 271 (590)
T cd03793 224 AHCAHVFTTVSEITAYEAEHLLKR----------------------KP-DV-VLPNGLNVKKFSALHEF--------QNL 271 (590)
T ss_pred HhhCCEEEECChHHHHHHHHHhCC----------------------CC-CE-EeCCCcchhhcccchhh--------hhh
Confidence 999999999999999998877754 22 23 99999999999753211 001
Q ss_pred CCCCCCchhHH-----HhhhcCCCCCcEEEE-EeCCCC-CCCHHHHHHHHHhcccccC--CC--cEE-EEE-ecC---CC
Q 001557 455 PASPDPPIWSE-----IMHFFSNPRKPMILA-LARPDP-KKNITTLVKAFGECRPLRE--LA--NLT-LIM-GNR---DD 518 (1054)
Q Consensus 455 ~~~~~~~~~~~-----~~~~~~~~~~~~Il~-vgRld~-~Kgi~~ll~A~~~l~~~~~--~~--~l~-LIi-G~~---~~ 518 (1054)
.......+.+. +.++..++++++++| +||+.+ .||++.+|+|+.++...-. .. .++ +|+ -.. -.
T Consensus 272 ~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~ 351 (590)
T cd03793 272 HAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFN 351 (590)
T ss_pred hHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcC
Confidence 11122222332 223344568888888 799999 9999999999999864211 12 233 333 211 11
Q ss_pred chhhhhch-----HHHHHHHHHH---------------------------------------------------------
Q 001557 519 IDEMSGTN-----AALLLSILKL--------------------------------------------------------- 536 (1054)
Q Consensus 519 ~~~~~~~~-----~~~~~~i~~l--------------------------------------------------------- 536 (1054)
.+.++.+. .+.+..|++.
T Consensus 352 ~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~i 431 (590)
T cd03793 352 VESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPI 431 (590)
T ss_pred HHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHH
Confidence 22222211 1111111111
Q ss_pred ---HHHcCCCC----C--EEe-CCCCCC------CcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcccc
Q 001557 537 ---IDKYDLYG----Q--VAY-PKHHKQ------SDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG 600 (1054)
Q Consensus 537 ---~~~~~l~~----~--V~~-~g~~~~------~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~G 600 (1054)
+.+.++.+ + |.| |-+++. .+..++|+.| |++|+||++||||++++||||||+|||+|+.+
T Consensus 432 l~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~----dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~ 507 (590)
T cd03793 432 LNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSITTNLS 507 (590)
T ss_pred HHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhc----eEEEeccccCCCCcHHHHHHHcCCCEEEccCc
Confidence 12222211 1 222 222222 2478999999 99999999999999999999999999999999
Q ss_pred Cc----ccceeeC-CceEEeC-------CCCHHHHHHHHHHHHhCHHHHHHHHHHHH--HHHhcCCHHHHHHHHHHHHHH
Q 001557 601 GP----VDIHRVL-DNGLLVD-------PHDQQSIADALLKLVSDKQLWERCRQNGL--KNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 601 g~----~eiv~~~-~~Gllv~-------p~d~~~la~aI~~ll~d~~~~~~~~~~~~--~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
|+ .|++.++ ..|++|. +.++++|+++|.+++.. ..++++..++. +..+.|+|++.+..|.+.+..
T Consensus 508 gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 508 GFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred chhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 88 5665544 3578886 45678899999998864 45666665555 555799999999999999986
Q ss_pred hhh
Q 001557 667 CKQ 669 (1054)
Q Consensus 667 ~~~ 669 (1054)
.+.
T Consensus 587 Al~ 589 (590)
T cd03793 587 ALS 589 (590)
T ss_pred Hhh
Confidence 543
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=281.98 Aligned_cols=357 Identities=15% Similarity=0.144 Sum_probs=238.4
Q ss_pred CCeEEEEccCCCCC-----cccccccCCCChHHH----------HHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCC
Q 001557 252 SGAYIIRIPFGPKD-----KYVQKELLWPHIPEF----------VDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD 316 (1054)
Q Consensus 252 ~g~~i~rip~g~~~-----~~l~k~~l~~~l~~f----------~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~ 316 (1054)
.++.++.+...+.. .-..++.+||.+..+ ..........++..+.+.+. ..|+||.|++.
T Consensus 67 ~~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~-----~~d~iwihDyh 141 (460)
T cd03788 67 GEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLARFDREDWEAYVRVNRKFADAIAEVLR-----PGDLVWVHDYH 141 (460)
T ss_pred CCceEEEeeCCHHHHHHHHHHhhhhhcchhhcCCCCccccCHHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEeChh
Confidence 35666666654321 113356778755432 22223333444555555432 36999999987
Q ss_pred chHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhh
Q 001557 317 AGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRL 395 (1054)
Q Consensus 317 a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~ 395 (1054)
...++.++.+. .+.|+++..|-.++..- .+... .....+. ..+..+|+|.+.|...+..+...
T Consensus 142 l~llp~~lr~~~~~~~i~~f~HipfP~~e-~~~~l--------p~~~~ll-------~~~l~~D~igF~t~~~~~~Fl~~ 205 (460)
T cd03788 142 LLLLPQMLRERGPDARIGFFLHIPFPSSE-IFRCL--------PWREELL-------RGLLGADLIGFQTERYARNFLSC 205 (460)
T ss_pred hhHHHHHHHhhCCCCeEEEEEeCCCCChH-HHhhC--------CChHHHH-------HHHhcCCEEEECCHHHHHHHHHH
Confidence 77777776544 46899999997765431 11100 0011111 23556999999998877765543
Q ss_pred hcCCChHHHHHHHHh--HhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhh-hcCC
Q 001557 396 YDGFDPVLERKLRAR--IKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMH-FFSN 472 (1054)
Q Consensus 396 y~~~~~~l~~~l~~r--~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 472 (1054)
... .+... ...++...|+.. ++.+||||||.+.|.+.... +......++ ....
T Consensus 206 ~~~-------~l~~~~~~~~~i~~~g~~~-~i~vip~GID~~~f~~~~~~----------------~~~~~~~~~~~~~~ 261 (460)
T cd03788 206 CSR-------LLGLEVTDDGGVEYGGRRV-RVGAFPIGIDPDAFRKLAAS----------------PEVQERAAELRERL 261 (460)
T ss_pred HHH-------HcCCcccCCceEEECCEEE-EEEEEeCeEcHHHHHHHhcC----------------chhHHHHHHHHHhc
Confidence 211 11000 013444455443 79999999999999753211 111111111 1224
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecCC--CchhhhhchHHHHHHHHHHHHHc-------
Q 001557 473 PRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSGTNAALLLSILKLIDKY------- 540 (1054)
Q Consensus 473 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~L-IiG~~~--~~~~~~~~~~~~~~~i~~l~~~~------- 540 (1054)
+++++|+++||+++.||+..+|+||+.+.+..+.. +++| ++|+.. +... ..++...+.++++++
T Consensus 262 ~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~----~~~l~~~l~~~v~~in~~~g~~ 337 (460)
T cd03788 262 GGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPE----YQELRREVEELVGRINGKFGTL 337 (460)
T ss_pred CCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHH----HHHHHHHHHHHHHHHHhccCCC
Confidence 67899999999999999999999999987544432 3444 454321 1111 122344444444443
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCC----EEEccccCcccceeeCCceEEeC
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLP----IVATKNGGPVDIHRVLDNGLLVD 616 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~P----VIat~~Gg~~eiv~~~~~Gllv~ 616 (1054)
++.+.+.+.|.++.+++.++|+.| |+||+||..||||++++||||||+| ||+|+.+|..+. +.+|++|+
T Consensus 338 ~~~~v~~~~g~v~~~el~~~y~~a----Dv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~ 410 (460)
T cd03788 338 DWTPVRYLYRSLPREELAALYRAA----DVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVN 410 (460)
T ss_pred CceeEEEEeCCCCHHHHHHHHHhc----cEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEEC
Confidence 245566777889999999999999 9999999999999999999999999 898888777776 46899999
Q ss_pred CCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001557 617 PHDQQSIADALLKLVSDK-QLWERCRQNGLKNIHQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 617 p~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l 664 (1054)
|+|++++|++|.++++++ ++++.+++++++.++.|||..|+++|+..+
T Consensus 411 p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 411 PYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 999999999999999965 667777888888889999999999998764
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-26 Score=268.80 Aligned_cols=362 Identities=13% Similarity=0.106 Sum_probs=255.2
Q ss_pred CeEEEEccCCCCC-----cccccccCCCChHH----------HHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCc
Q 001557 253 GAYIIRIPFGPKD-----KYVQKELLWPHIPE----------FVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA 317 (1054)
Q Consensus 253 g~~i~rip~g~~~-----~~l~k~~l~~~l~~----------f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a 317 (1054)
++....++..+.. ....+..+||.+.. ...........++.++.+.+.. -|+|-.|++..
T Consensus 69 ~~~~~~v~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-----~d~vWVhDYhL 143 (487)
T TIGR02398 69 KLTAARIPLSKEQVDIFYHITSKEAFWPILHTFPERFQFREDDWQVFLKVNRAFAEAACLEAAE-----GATVWVHDYNL 143 (487)
T ss_pred ceeEEEEeCCHHHHHHHHhhhhhccccccccCCccccCcCHHHHHHHHHHHHHHHHHHHHhcCC-----CCEEEEecchh
Confidence 4555666654321 12345667775432 2222333344455555554322 37999999877
Q ss_pred hHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhh
Q 001557 318 GDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLY 396 (1054)
Q Consensus 318 ~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y 396 (1054)
.+++.++.+. ...++-|..|-.++..- -+. .....+.| -..+-.+|+|-+.|..+++.+....
T Consensus 144 ~llp~~LR~~~~~~~IgfFlHiPFPs~e-ifr------------~LP~r~~l---l~glL~aDliGFqt~~y~~~Fl~~~ 207 (487)
T TIGR02398 144 WLVPGYIRQLRPDLKIAFFHHTPFPSAD-VFN------------ILPWREQI---IGSLLCCDYIGFHIPRYVENFVDAA 207 (487)
T ss_pred hHHHHHHHHhCCCCeEEEEeeCCCCChH-HHh------------hCCchHHH---HHHHhcCCeEEeCCHHHHHHHHHHH
Confidence 7788877654 45788899998765431 110 00011111 2357789999999999988766532
Q ss_pred cCCChHHHHHHHHhH----------------------hcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCC
Q 001557 397 DGFDPVLERKLRARI----------------------KRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGS 454 (1054)
Q Consensus 397 ~~~~~~l~~~l~~r~----------------------~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~ 454 (1054)
. +.|+.+. .-+|...|+.. ++.++|+|||++.|.+.....
T Consensus 208 ~-------r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v-~v~~~PiGID~~~f~~~~~~~---------- 269 (487)
T TIGR02398 208 R-------GLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVV-KLGAHPVGTDPERIRSALAAA---------- 269 (487)
T ss_pred H-------HHhCCccccccccccccccccccccccccccceeECCEEE-EEEEEECEecHHHHHHHhcCc----------
Confidence 2 2222111 11355556666 799999999999997532110
Q ss_pred CCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecC-----CCchhhhhch
Q 001557 455 PASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNR-----DDIDEMSGTN 526 (1054)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~L-IiG~~-----~~~~~~~~~~ 526 (1054)
......+.++..+ .++++|+++||+|+.|||..+|+||+++++.+|.. +++| ++|.. +.|++++.+.
T Consensus 270 ---~~~~~~~~lr~~~--~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v 344 (487)
T TIGR02398 270 ---SIREMMERIRSEL--AGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQI 344 (487)
T ss_pred ---hHHHHHHHHHHHc--CCceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHH
Confidence 1112223334333 37899999999999999999999999997666654 4555 34432 5667788888
Q ss_pred HHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCC----CEEEccccCc
Q 001557 527 AALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGL----PIVATKNGGP 602 (1054)
Q Consensus 527 ~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~----PVIat~~Gg~ 602 (1054)
.+...+||+..++.++.+.+++.+.++.+++.++|+.| ||+++||++||||||.+||+||+. |+|.|..+|.
T Consensus 345 ~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~A----DV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGa 420 (487)
T TIGR02398 345 EQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMA----DVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGA 420 (487)
T ss_pred HHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhC----CEEEECccccccCcchhhHHhhhcCCCCCEEEeccccc
Confidence 88888999999999999999999999999999999999 999999999999999999999976 7777776665
Q ss_pred ccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHH-HHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001557 603 VDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWER-CRQNGLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 603 ~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~-~~~~~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
.+.+ .++++|||+|++++|++|.++|++|...++ ..+..++.+..++...|++.|+..+.
T Consensus 421 a~~l---~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 421 AVEL---KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVS 481 (487)
T ss_pred hhhc---CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 5443 469999999999999999999997775544 44555566699999999999998775
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-26 Score=258.89 Aligned_cols=255 Identities=13% Similarity=0.099 Sum_probs=184.3
Q ss_pred EcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhh-hccCCEEEecCHHHHH
Q 001557 312 GHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELS-LDASEIVITSTRQEIE 390 (1054)
Q Consensus 312 ~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~-l~~ad~Vi~~S~~~~~ 390 (1054)
.|+.......+......|+|+|++.|+..+ +.+. .+.+. .+.+|.|+++|+...+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~----------------------l~~~--~~~~~~~~~ad~ii~~S~~~~~ 107 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA----------------------ISHT--ALYFFRNQPVDEIVVPSQWSKN 107 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech----------------------hhHH--HHHHHhhccCCEEEECCHHHHH
Confidence 444445556665566679999999998321 1111 13345 6789999999998877
Q ss_pred HHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhc
Q 001557 391 EQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFF 470 (1054)
Q Consensus 391 ~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (1054)
.+..... . ...++.+||||||.+.|.+....
T Consensus 108 ~l~~~g~--~--------------------~~~~i~vIpNGVd~~~f~~~~~~--------------------------- 138 (331)
T PHA01630 108 AFYTSGL--K--------------------IPQPIYVIPHNLNPRMFEYKPKE--------------------------- 138 (331)
T ss_pred HHHHcCC--C--------------------CCCCEEEECCCCCHHHcCCCccc---------------------------
Confidence 6533211 0 01279999999999888643210
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeC
Q 001557 471 SNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYP 549 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~ 549 (1054)
..+..+++++|++.+.||++.+|+|+..+.+. .+++.+ ++|++.. . .++ .++.+ +.
T Consensus 139 -~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~--~~~~~llivG~~~~--~---------~~l------~~~~~---~~ 195 (331)
T PHA01630 139 -KPHPCVLAILPHSWDRKGGDIVVKIFHELQNE--GYDFYFLIKSSNML--D---------PRL------FGLNG---VK 195 (331)
T ss_pred -cCCCEEEEEeccccccCCHHHHHHHHHHHHhh--CCCEEEEEEeCccc--c---------hhh------ccccc---ee
Confidence 12345666778899999999999999998643 345554 6675432 1 011 12222 34
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCC------------
Q 001557 550 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDP------------ 617 (1054)
Q Consensus 550 g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p------------ 617 (1054)
+.++.+++..+|+.| |+||+||..|+||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 196 ~~v~~~~l~~~y~~a----Dv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~ 271 (331)
T PHA01630 196 TPLPDDDIYSLFAGC----DILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPI 271 (331)
T ss_pred ccCCHHHHHHHHHhC----CEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCc
Confidence 567889999999999 9999999999999999999999999999999999999999888777642
Q ss_pred -------CCHHHHHHHHHHHHhCH--HHHH-HHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001557 618 -------HDQQSIADALLKLVSDK--QLWE-RCRQNGLKNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 618 -------~d~~~la~aI~~ll~d~--~~~~-~~~~~~~~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
.|.+++++++.+++.++ +.++ .+..++....++|||+.++++|+++|++
T Consensus 272 ~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 272 HVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred ccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 37888999999999863 4444 4444444445899999999999999874
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=256.58 Aligned_cols=242 Identities=12% Similarity=0.081 Sum_probs=159.4
Q ss_pred CCCEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEE
Q 001557 767 RRKYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELY 843 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~ 843 (1054)
+.+++|++|||||| .+.+++.++++|++++++ |+.|+|||||++.++.+++++++++ .+++||+||+.||
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~~~~l~~~---~~~~I~~NGa~I~ 77 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREA----QVPVILCSSKTAAEMLPLQQTLGLQ---GLPLIAENGAVIQ 77 (271)
T ss_pred CCCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHHhCCC---CCcEEEeCCCEEE
Confidence 56799999999999 356889999999999997 9999999999999999999999983 2469999999999
Q ss_pred cCCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhh-ccC--C-CCc-----------c-CcccccccccCcc
Q 001557 844 YPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAAS-VND--K-KGE-----------E-GKIVEEDESRSTI 907 (1054)
Q Consensus 844 ~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~-~~~--~-~~~-----------~-~~~v~~~~~~~~~ 907 (1054)
......... .+ .. .......+.+..++..+... ... . ... . ....... .....
T Consensus 78 ~~~~~~~~~---~~---~~----~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 146 (271)
T PRK03669 78 LDEQWQDHP---DF---PR----IISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALAR-LHEAS 146 (271)
T ss_pred ecCcccCCC---Cc---eE----eecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHh-ccccC
Confidence 753211000 00 00 01111222222222111100 000 0 000 0 0000000 00011
Q ss_pred eEEEEEecCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCC---CccCEEEEeCcCCC
Q 001557 908 HCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGI---DLSNVVVIAGECGD 984 (1054)
Q Consensus 908 ~kis~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI---~~e~vvaf~GD~~d 984 (1054)
.++.+. .. ...+.++.+.+... .++++.+ + .++||+|+++|||+||++|++++|| ++++++| +||+.|
T Consensus 147 ~~~~~~-~~---~~~~~~~~~~l~~~--~~~~~~~-~-~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~via-fGDs~N 217 (271)
T PRK03669 147 VTLIWR-DS---DERMAQFTARLAEL--GLQFVQG-A-RFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLG-LGDGPN 217 (271)
T ss_pred ceeEec-CC---HHHHHHHHHHHHHC--CCEEEec-C-eeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEE-EcCCHH
Confidence 233222 11 12345566666543 4555553 3 3899999999999999999999999 9999999 888999
Q ss_pred ccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhc
Q 001557 985 TDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 985 ~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 1049 (1054)
| ++||+.+|+||||||+....+ -++..+....|+|...++|||.++|+||-
T Consensus 218 -D-i~Ml~~ag~gvAM~~~~~~~~------------~l~~~~~~~~~~~~~~~~~g~~~~l~~~~ 268 (271)
T PRK03669 218 -D-APLLDVMDYAVVVKGLNREGV------------HLQDDDPARVYRTQREGPEGWREGLDHFF 268 (271)
T ss_pred -H-HHHHHhCCEEEEecCCCCCCc------------ccccccCCceEeccCCCcHHHHHHHHHHH
Confidence 8 999999999999998771100 11234556778999999999999999973
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.1e-26 Score=261.42 Aligned_cols=422 Identities=15% Similarity=0.117 Sum_probs=287.3
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
++++||. =+ |+.-++.+..||.... |...|.+.+| +.+--.....+ ....+.
T Consensus 3 rLivVSN-Rl----p~~~~~~~~~GGL~~a---L~~~l~~~~g---~WvGW~g~~~~--------~~~~~~--------- 54 (474)
T PRK10117 3 RLVVVSN-RI----APPDEHKASAGGLAVG---ILGALKAAGG---LWFGWSGETGN--------EDQPLK--------- 54 (474)
T ss_pred CEEEEEC-CC----cCCCCCCcCCCCcHHH---HHHHHHhcCc---eEEEecCCCCC--------Ccccch---------
Confidence 6778885 33 2333445667998876 4555666644 44433221000 000000
Q ss_pred ccCCCCCeEEEEccCCCCC-----cccccccCCCChHH----------HHHHHHHHHHHHHHHHhhhhcCCCCCcceEEE
Q 001557 247 GLGESSGAYIIRIPFGPKD-----KYVQKELLWPHIPE----------FVDAALTHIIQISKVLGEQVGSGQPIWPVAIH 311 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~-----~~l~k~~l~~~l~~----------f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh 311 (1054)
.....++....++..+.+ ....++.+||.+.. ...........++..+.+.+.. -|+|-
T Consensus 55 -~~~~~~~~~~~v~L~~~~~~~yY~gfsn~~LWPlfHy~~~~~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-----~D~VW 128 (474)
T PRK10117 55 -KVKKGNITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWEGYLRVNALLADKLLPLLKD-----DDIIW 128 (474)
T ss_pred -hhhcCCceEEEecCCHHHHHHHHhhhhhcchhhhhCCCCCccCcCHHHHHHHHHHHHHHHHHHHHhcCC-----CCEEE
Confidence 011124566666654321 12345667775432 2223333344455555554332 38999
Q ss_pred EcCCCchHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHH
Q 001557 312 GHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIE 390 (1054)
Q Consensus 312 ~h~~~a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~ 390 (1054)
.|++....++.++.+. ...++-|..|-.++..- -+. .....+.| -..+-.+|+|-+.|..+++
T Consensus 129 VHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~e-ifr------------~LP~r~ei---l~glL~aDlIGFqt~~y~r 192 (474)
T PRK10117 129 IHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPE-IFN------------ALPPHDEL---LEQLCDYDLLGFQTENDRL 192 (474)
T ss_pred EeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChH-HHh------------hCCChHHH---HHHHHhCccceeCCHHHHH
Confidence 9998777777777544 46789999998766431 110 00011111 2357789999999999888
Q ss_pred HHHhhhcCCChHHHHHHHHhHh--cccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhh
Q 001557 391 EQWRLYDGFDPVLERKLRARIK--RGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMH 468 (1054)
Q Consensus 391 ~~~~~y~~~~~~l~~~l~~r~~--~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (1054)
.+..... +.++.+.. ..+...|+.. ++.++|.|||++.|...... +.......++.
T Consensus 193 nFl~~~~-------~~lg~~~~~~~~v~~~gr~v-~v~~~PigID~~~~~~~a~~--------------~~~~~~~~lr~ 250 (474)
T PRK10117 193 AFLDCLS-------NLTRVTTRSGKSHTAWGKAF-RTEVYPIGIEPDEIAKQAAG--------------PLPPKLAQLKA 250 (474)
T ss_pred HHHHHHH-------HHcCCcccCCCeEEECCeEE-EEEEEECeEcHHHHHHHhhc--------------hHHHHHHHHHH
Confidence 7665322 22221111 1233446555 79999999999998742210 11122233333
Q ss_pred hcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE-E-----ecCCCchhhhhchHHHHHHHHHHHHHc
Q 001557 469 FFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-M-----GNRDDIDEMSGTNAALLLSILKLIDKY 540 (1054)
Q Consensus 469 ~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~LI-i-----G~~~~~~~~~~~~~~~~~~i~~l~~~~ 540 (1054)
.+ .++++|+.++|+|+.|||...++||+++++.+|.. +++|+ + ++.+.|.+++.+..+.+++||+..++.
T Consensus 251 ~~--~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~ 328 (474)
T PRK10117 251 EL--KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQL 328 (474)
T ss_pred Hc--CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCC
Confidence 33 46889999999999999999999999998777765 45543 2 445677888889999999999999999
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHc------CCCEEEccccCcccceeeCCceEE
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY------GLPIVATKNGGPVDIHRVLDNGLL 614 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~------G~PVIat~~Gg~~eiv~~~~~Gll 614 (1054)
+|.+..++...++++++.++|+.| ||++++|+.||||||.+||+|| |+.|++..+|+..++ ..+++
T Consensus 329 ~w~Pv~y~~~~~~~~~l~alyr~A----Dv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L----~~All 400 (474)
T PRK10117 329 GWTPLYYLNQHFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL----TSALI 400 (474)
T ss_pred CceeEEEecCCCCHHHHHHHHHhc----cEEEecccccccccccchheeeecCCCCccEEEecccchHHHh----CCCeE
Confidence 999999999999999999999999 9999999999999999999999 678899999998888 46999
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHH-HHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 001557 615 VDPHDQQSIADALLKLVSDKQLWER-CRQNGLKNIHQFSWPEHCKSYLSRISSCKQR 670 (1054)
Q Consensus 615 v~p~d~~~la~aI~~ll~d~~~~~~-~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~~ 670 (1054)
|||+|.+++|+||.++|++|...++ ..+..++.+..++...|++.|++.+..+...
T Consensus 401 VNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 401 VNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 457 (474)
T ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999997665544 4455556669999999999999999877543
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=250.30 Aligned_cols=218 Identities=17% Similarity=0.157 Sum_probs=153.3
Q ss_pred EEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCCC
Q 001557 772 FVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSS 848 (1054)
Q Consensus 772 iv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~~ 848 (1054)
|++|+|||| ++.+++.++++|+++++. |+.|+|||||++.++.++++.+++ ++++||+||+.|++.+..
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----Gi~~~~aTGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~~~~~ 72 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESV----GIPVVLVTGNSVQFARALAKLIGT----PDPVIAENGGEISYNEGM 72 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCC----CCeEEEecCcEEEeCCCC
Confidence 589999999 356999999999999986 999999999999999999999987 468999999999975310
Q ss_pred CCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCccHHHHHH
Q 001557 849 TEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRK 928 (1054)
Q Consensus 849 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~~~~el~~ 928 (1054)
...|...+...|....+.......... ..........+++.+. . ..+.+..
T Consensus 73 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~-~------~~~~~~~ 123 (225)
T TIGR01482 73 -----------DDIFLAYLEEEWFLDIVIAKTFPFSRL-----------KVQYPRRASLVKMRYG-I------DVDTVRE 123 (225)
T ss_pred -----------ceEEecccCHHHHHHHHHhcccchhhh-----------ccccccccceEEEeec-C------CHHHHHH
Confidence 112222232222221111100000000 0000011122333221 1 1123444
Q ss_pred HHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchhHH
Q 001557 929 LMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESAR 1008 (1054)
Q Consensus 929 ~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~ 1008 (1054)
.+...+..+.+. +.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+.+|+||||+||. .+
T Consensus 124 ~~~~~~~~~~~~-~~~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~--~~ 196 (225)
T TIGR01482 124 IIKELGLNLVAV-DSGF-DIHILPQGVNKGVAVKKLKEKLGIKPGETLV-CGDSEN-D-IDLFEVPGFGVAVANAQ--PE 196 (225)
T ss_pred HHHhcCceEEEe-cCCc-EEEEeeCCCCHHHHHHHHHHHhCCCHHHEEE-ECCCHh-h-HHHHHhcCceEEcCChh--HH
Confidence 444444444333 4454 8999999999999999999999999999998 889999 9 99999999999999998 45
Q ss_pred hhhhccCCCcccccccCCCceEEeccccCHHH----HHHHHHHhc
Q 001557 1009 KLHANRNYSLEDVISFDSHNVIQVDEACDSYD----IRASLEKLG 1049 (1054)
Q Consensus 1009 ~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~g----I~~al~~~~ 1049 (1054)
++..++ +||.+..++| |.++|++||
T Consensus 197 ~k~~A~----------------~vt~~~~~~G~~~~v~~~l~~~~ 225 (225)
T TIGR01482 197 LKEWAD----------------YVTESPYGEGGAEAIGEILQAIG 225 (225)
T ss_pred HHHhcC----------------eecCCCCCCcHHHHHHHHHHhhC
Confidence 555555 8999999999 999999987
|
catalyze the same reaction as SPP. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=258.76 Aligned_cols=273 Identities=24% Similarity=0.330 Sum_probs=209.5
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
..+|+|+++....... ..+......+.++++|+.......... ...+...++ + ....+..+|.|+++
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~------~~~~~~~~~---~---~~~~~~~~d~ii~~ 164 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPV------HSLINNFYE---Y---VFENLDKVDGVIVA 164 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCccccc------ccccchhhH---H---HHhChhhCCEEEEc
Confidence 4599999998644333 233444566788999974322211000 000111111 1 12246789999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+...++.. .++.+||+|++...+.+..
T Consensus 165 s~~~~~~l~~~~~~~-----------------------~~v~~ip~g~~~~~~~~~~----------------------- 198 (372)
T cd04949 165 TEQQKQDLQKQFGNY-----------------------NPIYTIPVGSIDPLKLPAQ----------------------- 198 (372)
T ss_pred cHHHHHHHHHHhCCC-----------------------CceEEEcccccChhhcccc-----------------------
Confidence 998877766555421 1589999999988765421
Q ss_pred HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCC
Q 001557 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~ 543 (1054)
......+.|+++||+.+.||++.+++|+..+.... +++.| |+|.++. ...+..++.++++.
T Consensus 199 -----~~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~--~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~ 260 (372)
T cd04949 199 -----FKQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQV--PDATLDIYGYGDE-----------EEKLKELIEELGLE 260 (372)
T ss_pred -----hhhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhC--CCcEEEEEEeCch-----------HHHHHHHHHHcCCc
Confidence 00235678999999999999999999999996433 45554 6787764 23456667888888
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcccc-CcccceeeCCceEEeCCCCHHH
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQS 622 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~G-g~~eiv~~~~~Gllv~p~d~~~ 622 (1054)
..|.|.|+ .+++..+|+.| |++|+||..||||++++|||+||+|||+++.| |+.+++.++.+|+++++.|+++
T Consensus 261 ~~v~~~g~--~~~~~~~~~~a----d~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~ 334 (372)
T cd04949 261 DYVFLKGY--TRDLDEVYQKA----QLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEA 334 (372)
T ss_pred ceEEEcCC--CCCHHHHHhhh----hEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHH
Confidence 99999995 67899999999 99999999999999999999999999999987 8999999999999999999999
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 001557 623 IADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 660 (1054)
Q Consensus 623 la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~y 660 (1054)
++++|.+++++++.++++++++++.+++|||+.++++|
T Consensus 335 la~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 335 LAEAIIELLNDPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 99999999999999999999999998899999998764
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=273.96 Aligned_cols=248 Identities=15% Similarity=0.118 Sum_probs=159.5
Q ss_pred CCEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCc-------EEEEc
Q 001557 768 RKYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFD-------AFICN 837 (1054)
Q Consensus 768 ~kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d-------~lI~~ 837 (1054)
..|+|++|||||| ++.+++.++++|++++++ |+.|+|||||++.++.++++++++. .++ ++||+
T Consensus 307 ~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ek----Gi~~vIATGR~~~~i~~~l~~L~l~--~~~~~I~~~~p~I~~ 380 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKSQISETNAKALKEALSR----GVKVVIATGKARPAVIDILKMVDLA--GKDGIISESSPGVFL 380 (580)
T ss_pred CccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHhCcc--cccceEeecccEEee
Confidence 4699999999999 467999999999999997 9999999999999999999999873 233 35677
Q ss_pred CCcEEEcCCCCC--CCCCC-------CccccCccc--hhhhccccC---hhhHHHHHHHhhhhccCCCCccCcccccccc
Q 001557 838 SGSELYYPSSST--EDNHG-------LPFLVDLDY--RFHTEYRWG---GEGLRKTLVRWAASVNDKKGEEGKIVEEDES 903 (1054)
Q Consensus 838 nGa~I~~~~~~~--~~~~~-------~~~~~d~~~--~~~i~~~w~---~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~ 903 (1054)
||+.||...+.. ..... +.+...... .......|. .+......... ...........+.+...
T Consensus 381 NGA~I~d~~g~~I~~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~---~~~~~~~~i~~l~~~~~ 457 (580)
T PLN02887 381 QGLLVYGRQGREIYRSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTI---YHEPKAEIMSSVDQLLA 457 (580)
T ss_pred cCeEEEECCCcEEEEEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHh---hccccccccCCHHHhhc
Confidence 999998533211 00000 000000000 000000000 00000000000 00000000000000000
Q ss_pred cCcceEEEEEecCCCCCccHHHHHHHHHHh-cCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcC
Q 001557 904 RSTIHCYAFEVTNPQMIPPVKELRKLMRIQ-ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGEC 982 (1054)
Q Consensus 904 ~~~~~kis~~~~~~~~~~~~~el~~~l~~~-~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~ 982 (1054)
.....|+.+.. .++ ....++.+.+... ...+.++.+.++ ++||+|+++|||.||++|++++||+++++|| |||+
T Consensus 458 ~~~i~Ki~~~~-~~e--~~~~~l~~~l~~~~~~~~~v~~S~~~-~lEI~p~gvSKG~ALk~L~e~lGI~~eeviA-FGDs 532 (580)
T PLN02887 458 AADIQKVIFLD-TAE--GVSSVLRPYWSEATGDRANVVQAQPD-MLEIVPPGTSKGNGVKMLLNHLGVSPDEIMA-IGDG 532 (580)
T ss_pred ccCeeEEEEEc-ChH--HHHHHHHHHHHHHhcCcEEEEEecCc-EEEEecCCCCHHHHHHHHHHHcCCCHHHEEE-Eecc
Confidence 11234554432 221 1123344444332 346788888876 9999999999999999999999999999999 8888
Q ss_pred CCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhc
Q 001557 983 GDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 983 ~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 1049 (1054)
.| | ++||+.+|+|||||||. .+++..++ +||.++++|||+++|++|-
T Consensus 533 ~N-D-IeMLe~AG~gVAMgNA~--eeVK~~Ad----------------~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 533 EN-D-IEMLQLASLGVALSNGA--EKTKAVAD----------------VIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred hh-h-HHHHHHCCCEEEeCCCC--HHHHHhCC----------------EEeCCCCcCHHHHHHHHhh
Confidence 88 8 99999999999999999 45555555 8999999999999999873
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=248.97 Aligned_cols=225 Identities=16% Similarity=0.114 Sum_probs=156.4
Q ss_pred CEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
.|+|++|+|||| ++.+++.++++|+++++. |+.|+|||||++..+.++++.++++ +++||+||+.|+..
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~i~~nGa~i~~~ 74 (230)
T PRK01158 3 IKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKL----GIPVILATGNVLCFARAAAKLIGTS----GPVIAENGGVISVG 74 (230)
T ss_pred eeEEEEecCCCcCCCCCccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCCC----CcEEEecCeEEEEc
Confidence 489999999999 466999999999999986 9999999999999999999999983 57999999999975
Q ss_pred CCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCccHHH
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKE 925 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~~~~e 925 (1054)
... ... +...+. .....+..+........ ..+..........++.+ .. . ...++
T Consensus 75 ~~~-------~~~----~~~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~-~---~~~~~ 128 (230)
T PRK01158 75 FDG-------KRI----FLGDIE------ECEKAYSELKKRFPEAS----TSLTKLDPDYRKTEVAL-RR-T---VPVEE 128 (230)
T ss_pred CCC-------CEE----EEcchH------HHHHHHHHHHHhccccc----eeeecCCcccccceeee-cc-c---ccHHH
Confidence 210 111 111111 11111211111110000 00000000000111211 11 1 12345
Q ss_pred HHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcch
Q 001557 926 LRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGE 1005 (1054)
Q Consensus 926 l~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~ 1005 (1054)
+.+.+...+..+.++.+ +. ++||+|+++|||.|+++|++++|++++++++ +||+.| | ++||+.+|+||||+||.
T Consensus 129 ~~~~l~~~~~~~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~- 202 (230)
T PRK01158 129 VRELLEELGLDLEIVDS-GF-AIHIKSPGVNKGTGLKKLAELMGIDPEEVAA-IGDSEN-D-LEMFEVAGFGVAVANAD- 202 (230)
T ss_pred HHHHHHHcCCcEEEEec-ce-EEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-HHHHHhcCceEEecCcc-
Confidence 66666654444555554 33 7999999999999999999999999999999 899999 9 99999999999999999
Q ss_pred hHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhcc
Q 001557 1006 SARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGV 1050 (1054)
Q Consensus 1006 ~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~~ 1050 (1054)
.+++..+ .++|.+++++||+++|++|.+
T Consensus 203 -~~vk~~a----------------~~v~~~n~~~Gv~~~l~~~~~ 230 (230)
T PRK01158 203 -EELKEAA----------------DYVTEKSYGEGVAEAIEHLLL 230 (230)
T ss_pred -HHHHHhc----------------ceEecCCCcChHHHHHHHHhC
Confidence 4444444 489999999999999999864
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-24 Score=241.35 Aligned_cols=222 Identities=14% Similarity=0.176 Sum_probs=163.6
Q ss_pred hccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCC
Q 001557 375 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGS 454 (1054)
Q Consensus 375 l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~ 454 (1054)
+...+.+|++|+...+.+.+. |+. . .+ +||+|+|++.|.|....
T Consensus 90 m~~~~~vIavS~~t~~~L~~~------------------G~~-----~-~i-~I~~GVD~~~f~p~~~~----------- 133 (335)
T PHA01633 90 LLQDVKFIPNSKFSAENLQEV------------------GLQ-----V-DL-PVFHGINFKIVENAEKL----------- 133 (335)
T ss_pred HhcCCEEEeCCHHHHHHHHHh------------------CCC-----C-ce-eeeCCCChhhcCccchh-----------
Confidence 444668899999877765432 111 1 33 47899999988753210
Q ss_pred CCCCCCchhHHHhhhcC-CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEEecCCCchhhhhchHHHHH
Q 001557 455 PASPDPPIWSEIMHFFS-NPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIMGNRDDIDEMSGTNAALLL 531 (1054)
Q Consensus 455 ~~~~~~~~~~~~~~~~~-~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~LIiG~~~~~~~~~~~~~~~~~ 531 (1054)
.+ +.+.++.. .++.++|+++||+.+.||++.+++|+..+.+..+.. ++.+++.+.
T Consensus 134 ----~~---~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~--------------- 191 (335)
T PHA01633 134 ----VP---QLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH--------------- 191 (335)
T ss_pred ----hH---HHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH---------------
Confidence 01 11112221 146788999999999999999999999986544432 355533321
Q ss_pred HHHHHHHHcCCCCCEEeC---CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceee
Q 001557 532 SILKLIDKYDLYGQVAYP---KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV 608 (1054)
Q Consensus 532 ~i~~l~~~~~l~~~V~~~---g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~ 608 (1054)
....++++.++|.|. |+.+.+++.++|+.| |+||+||..||||++++||||||+|||+++.||.+|++..
T Consensus 192 ---~~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~a----DifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~ 264 (335)
T PHA01633 192 ---KQFTQLEVPANVHFVAEFGHNSREYIFAFYGAM----DFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSW 264 (335)
T ss_pred ---HHHHHcCCCCcEEEEecCCCCCHHHHHHHHHhC----CEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCC
Confidence 113456677889998 555778999999999 9999999999999999999999999999999999886431
Q ss_pred ------------------CCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 001557 609 ------------------LDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLS 662 (1054)
Q Consensus 609 ------------------~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~ 662 (1054)
...|+++++.|+++|+++|.+++...+ ...+++++++.++.|+|+..+++|++
T Consensus 265 ~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~-~~~~~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 265 QWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD-REERSMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred ccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC-hhhhhHHHHHHHHhcCHHHHHHHhhC
Confidence 234778999999999999999976432 23347788888899999999999863
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=243.77 Aligned_cols=224 Identities=17% Similarity=0.224 Sum_probs=156.3
Q ss_pred EEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCCC
Q 001557 772 FVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSS 848 (1054)
Q Consensus 772 iv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~~ 848 (1054)
||+|+|||| ...+++.++++|+.++++ |+.|+|||||++..+.++++++++. +++||+||+.|+...+.
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~~~----~~~I~~nGa~i~~~~~~ 72 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEK----GIKLVIATGRSYSSIKRLLKELGID----DYFICSNGALIDDPKGK 72 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHT----TCEEEEECSSTHHHHHHHHHHTTHC----SEEEEGGGTEEEETTTE
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhccc----ceEEEEEccCcccccccccccccch----hhhcccccceeeecccc
Confidence 689999999 467999999999999997 9999999999999999999999983 68999999999443211
Q ss_pred CCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccC-----------CCC--------------ccCcc-ccccc
Q 001557 849 TEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVND-----------KKG--------------EEGKI-VEEDE 902 (1054)
Q Consensus 849 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~-----------~~~--------------~~~~~-v~~~~ 902 (1054)
.+ .......+.+..++......... ... ..... .....
T Consensus 73 --------~l--------~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (254)
T PF08282_consen 73 --------IL--------YEKPIDSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDL 136 (254)
T ss_dssp --------EE--------EEESB-HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHH
T ss_pred --------cc--------hhhheeccchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccccc
Confidence 11 00011111111111111000000 000 00000 00011
Q ss_pred ccCcceEEEEEecCCCCCccHHHHHHHHHHhc-CeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCc
Q 001557 903 SRSTIHCYAFEVTNPQMIPPVKELRKLMRIQA-LRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE 981 (1054)
Q Consensus 903 ~~~~~~kis~~~~~~~~~~~~~el~~~l~~~~-~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD 981 (1054)
......++.+. .++ ..+..+.+.+.... ..+.++.+.+. ++||+|+++|||.||++|++++|++++++++ +||
T Consensus 137 ~~~~i~ki~~~-~~~---~~~~~l~~~l~~~~~~~~~~~~~~~~-~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~-~GD 210 (254)
T PF08282_consen 137 EDEEIFKILFF-PDP---EDLEQLREELKKKFPNLIDVVRSSPY-FLEITPKGVSKGSAIKYLLEYLGISPEDIIA-FGD 210 (254)
T ss_dssp HCSSESEEEEE-SCH---HHHHHHHHHHHHHHTTTEEEEEEETT-EEEEEETTSSHHHHHHHHHHHHTTSGGGEEE-EES
T ss_pred ccccceeeecc-ccc---hhhhhhhhhhccccCcceeEEEeccc-ceEEeeCCCCHHHHHHHHhhhcccccceeEE-eec
Confidence 22345677744 222 24556666666543 33577778876 9999999999999999999999999999999 788
Q ss_pred CCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHH
Q 001557 982 CGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASL 1045 (1054)
Q Consensus 982 ~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al 1045 (1054)
+.| | ++||+.+|.||||+||. .+++..++ +++..+..+||+++|
T Consensus 211 ~~N-D-~~Ml~~~~~~~am~na~--~~~k~~a~----------------~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 211 SEN-D-IEMLELAGYSVAMGNAT--PELKKAAD----------------YITPSNNDDGVAKAI 254 (254)
T ss_dssp SGG-G-HHHHHHSSEEEEETTS---HHHHHHSS----------------EEESSGTCTHHHHHH
T ss_pred ccc-c-HhHHhhcCeEEEEcCCC--HHHHHhCC----------------EEecCCCCChHHHhC
Confidence 888 8 99999999999999999 55555555 788999999999986
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-25 Score=245.89 Aligned_cols=246 Identities=15% Similarity=0.142 Sum_probs=154.0
Q ss_pred CEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
.|+|++|+|||| ++.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||+.|+..
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~d~ 74 (272)
T PRK10530 3 YRVIALDLDGTLLTPKKTILPESLEALARAREA----GYKVIIVTGRHHVAIHPFYQALALD----TPAICCNGTYLYDY 74 (272)
T ss_pred ccEEEEeCCCceECCCCccCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CCEEEcCCcEEEec
Confidence 489999999999 467999999999999997 9999999999999999999999984 36999999999963
Q ss_pred CCCC---CCCCC-------CccccCccchhh--hcccc-Chh---hHHHHHHHhhhhccCCCCccCccc---ccc-cccC
Q 001557 846 SSST---EDNHG-------LPFLVDLDYRFH--TEYRW-GGE---GLRKTLVRWAASVNDKKGEEGKIV---EED-ESRS 905 (1054)
Q Consensus 846 ~~~~---~~~~~-------~~~~~d~~~~~~--i~~~w-~~e---~l~~~~~~~~~~~~~~~~~~~~~v---~~~-~~~~ 905 (1054)
.... ..... +.+......... ....| ... ...... .+..............+ .+. ....
T Consensus 75 ~~~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
T PRK10530 75 QAKKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTL-NWAQTLPPEQRPTFTQVDSLAQAARQVN 153 (272)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHh-hhhhccchhcccceEEcccHHHHHhhcC
Confidence 2111 00000 000000000000 00000 000 000000 00000000000000000 000 0011
Q ss_pred cceEEEEEecCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCc
Q 001557 906 TIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDT 985 (1054)
Q Consensus 906 ~~~kis~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~ 985 (1054)
...++... .++ ....+++.+.+... ..+.+..+... ++||+|.++|||.||+++++++|++++++++ +||+.|
T Consensus 154 ~~~~i~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~s~~~-~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~-~GD~~N- 226 (272)
T PRK10530 154 AIWKFALT--HED-LPQLQHFAKHVEHE-LGLECEWSWHD-QVDIARKGNSKGKRLTQWVEAQGWSMKNVVA-FGDNFN- 226 (272)
T ss_pred CcEEEEEe--cCC-HHHHHHHHHHHhhh-cCceEEEecCc-eEEEecCCCChHHHHHHHHHHcCCCHHHeEE-eCCChh-
Confidence 12333222 111 11233444444332 22445555554 8999999999999999999999999999999 899999
Q ss_pred cccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhc
Q 001557 986 DYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 986 D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 1049 (1054)
| ++||+.+|+|||||||. .+++..++ +++.++++|||+++|+++-
T Consensus 227 D-i~m~~~ag~~vamgna~--~~lk~~Ad----------------~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 227 D-ISMLEAAGLGVAMGNAD--DAVKARAD----------------LVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred h-HHHHHhcCceEEecCch--HHHHHhCC----------------EEEecCCCCcHHHHHHHHh
Confidence 9 99999999999999987 44444444 8889999999999999873
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.7e-24 Score=244.42 Aligned_cols=344 Identities=19% Similarity=0.157 Sum_probs=238.1
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
|||++++. |. ||......+|+++|.++ | |+|++++.... + ..+
T Consensus 2 ~~i~i~~~-g~--------------gG~~~~~~~la~~L~~~-g-~ev~vv~~~~~-~--------~~~----------- 44 (357)
T PRK00726 2 KKILLAGG-GT--------------GGHVFPALALAEELKKR-G-WEVLYLGTARG-M--------EAR----------- 44 (357)
T ss_pred cEEEEEcC-cc--------------hHhhhHHHHHHHHHHhC-C-CEEEEEECCCc-h--------hhh-----------
Confidence 88888874 33 89999999999999999 8 99999986421 0 000
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 325 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~ 325 (1054)
.....|+.+++++..... ....+..+..+ ...+..+..+.+.+.+ .+|||||+|.+..+..+..++
T Consensus 45 --~~~~~g~~~~~~~~~~~~----~~~~~~~l~~~-~~~~~~~~~~~~~ik~-------~~pDvv~~~~~~~~~~~~~~~ 110 (357)
T PRK00726 45 --LVPKAGIEFHFIPSGGLR----RKGSLANLKAP-FKLLKGVLQARKILKR-------FKPDVVVGFGGYVSGPGGLAA 110 (357)
T ss_pred --ccccCCCcEEEEeccCcC----CCChHHHHHHH-HHHHHHHHHHHHHHHh-------cCCCEEEECCCcchhHHHHHH
Confidence 011148888888764321 00111111111 1112222223333322 569999999876666677777
Q ss_pred ccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 326 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
+..++|+|++.|+..... . +++.+..+|.++++++... .. .
T Consensus 111 ~~~~~p~v~~~~~~~~~~---------------------~-----~r~~~~~~d~ii~~~~~~~---~~----~------ 151 (357)
T PRK00726 111 RLLGIPLVIHEQNAVPGL---------------------A-----NKLLARFAKKVATAFPGAF---PE----F------ 151 (357)
T ss_pred HHcCCCEEEEcCCCCccH---------------------H-----HHHHHHHhchheECchhhh---hc----c------
Confidence 788999999888642211 1 2234667899999887432 11 1
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCC
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 485 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld 485 (1054)
+..++.++|||+|.+.+.+... ..++...++.++|+++|+..
T Consensus 152 ---------------~~~~i~vi~n~v~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~~gg~~ 193 (357)
T PRK00726 152 ---------------FKPKAVVTGNPVREEILALAAP-----------------------PARLAGREGKPTLLVVGGSQ 193 (357)
T ss_pred ---------------CCCCEEEECCCCChHhhcccch-----------------------hhhccCCCCCeEEEEECCcH
Confidence 1128999999999876543110 01122235678899999998
Q ss_pred CCCCHHHHH-HHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001557 486 PKKNITTLV-KAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 564 (1054)
Q Consensus 486 ~~Kgi~~ll-~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A 564 (1054)
..|++..++ +|+.++.. .+...+++|+++. ..+.+..+ +++. |.+.|++ ++++.+|..|
T Consensus 194 ~~~~~~~~l~~a~~~~~~---~~~~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~~--~~~~~~~~~~ 253 (357)
T PRK00726 194 GARVLNEAVPEALALLPE---ALQVIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPFI--DDMAAAYAAA 253 (357)
T ss_pred hHHHHHHHHHHHHHHhhh---CcEEEEEcCCCcH------------HHHHHHhh-cCCc--EEEeehH--hhHHHHHHhC
Confidence 888876666 99988843 1333346788752 33444444 6653 8999996 7899999999
Q ss_pred hcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCc--------ccceeeCCceEEeCCCC--HHHHHHHHHHHHhCH
Q 001557 565 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP--------VDIHRVLDNGLLVDPHD--QQSIADALLKLVSDK 634 (1054)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~--------~eiv~~~~~Gllv~p~d--~~~la~aI~~ll~d~ 634 (1054)
|++|.++- +.+++|||+||+|+|++..++. .+.+.+.++|+++++.| +++++++|.++++|+
T Consensus 254 ----d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~ 325 (357)
T PRK00726 254 ----DLVICRAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDP 325 (357)
T ss_pred ----CEEEECCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCH
Confidence 99998762 6899999999999999986531 25566778899999888 999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001557 635 QLWERCRQNGLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 635 ~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
+.+++|++++++..+.++....++.+++.+.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 326 ERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 9999999999998889999999999888764
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.3e-25 Score=241.55 Aligned_cols=233 Identities=18% Similarity=0.078 Sum_probs=156.1
Q ss_pred EEEEEecCCC--C-hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCC
Q 001557 771 VFVIAADCDT--T-SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSS 847 (1054)
Q Consensus 771 Liv~DiDGTL--~-~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~ 847 (1054)
||++|+|||| . +...+.++++|++++++ |+.|+|||||++..+.+++++++++ +++||+||+.|+..+.
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~----g~~~~~~TgR~~~~~~~~~~~~~~~----~~~I~~NGa~i~~~~~ 72 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQEL----GIPVIPCTSKTAAEVEYLRKELGLE----DPFIVENGGAIYGPRG 72 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCCC----CcEEEcCCeEEEeCCC
Confidence 5899999999 2 32455799999999987 9999999999999999999999983 6899999999998642
Q ss_pred CCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhc-cCCCCccC------------cc-cccccccCcceEEEEE
Q 001557 848 STEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASV-NDKKGEEG------------KI-VEEDESRSTIHCYAFE 913 (1054)
Q Consensus 848 ~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~-~~~~~~~~------------~~-v~~~~~~~~~~kis~~ 913 (1054)
.. ..+..| .+...|..+.+.+++..+.... ........ .. ...........++ +.
T Consensus 73 ~~--------~~~~~~--~~~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 141 (256)
T TIGR01486 73 WF--------TEPEYP--VIALGIPYEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSET-IL 141 (256)
T ss_pred cc--------cCCCeE--EEEcCCCHHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCc-ee
Confidence 10 001011 1333455555544443321100 00000000 00 0000000011222 22
Q ss_pred ecCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCC--ccCEEEEeCcCCCccccccc
Q 001557 914 VTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGID--LSNVVVIAGECGDTDYEGLL 991 (1054)
Q Consensus 914 ~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~--~e~vvaf~GD~~d~D~~eML 991 (1054)
. ++ ..+..+.+.+... .+.+..+. . ++||+|+++|||.||++|++++|++ .+++++ +||+.| | ++||
T Consensus 142 ~-~~---~~~~~~~~~~~~~--~~~~~~s~-~-~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a-~GD~~N-D-~~Ml 210 (256)
T TIGR01486 142 W-SE---ERRERFTEALVEL--GLEVTHGN-R-FYHVLGAGSDKGKAANALKQFYNQPGGAIKVVG-LGDSPN-D-LPLL 210 (256)
T ss_pred c-Ch---HHHHHHHHHHHHc--CCEEEeCC-c-eEEEecCCCCHHHHHHHHHHHHhhcCCCceEEE-EcCCHh-h-HHHH
Confidence 2 22 2345666666543 34555543 3 8999999999999999999999999 999999 888999 9 9999
Q ss_pred cCcceEEEecCcchhHHhhhhccCCCcccccccCCCc---eEEeccccCHHHHHHHHHHh
Q 001557 992 GGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHN---VIQVDEACDSYDIRASLEKL 1048 (1054)
Q Consensus 992 ~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~t~~~~~~gI~~al~~~ 1048 (1054)
+.+|+||||+||... .+..+.. ..++|.+.++|||+++|+||
T Consensus 211 ~~ag~~vam~Na~~~---------------~~~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 211 EVVDLAVVVPGPNGP---------------NVSLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred HHCCEEEEeCCCCCC---------------ccccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 999999999999711 1133433 24899999999999999986
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-24 Score=236.82 Aligned_cols=221 Identities=16% Similarity=0.144 Sum_probs=152.2
Q ss_pred EEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCC
Q 001557 771 VFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSS 847 (1054)
Q Consensus 771 Liv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~ 847 (1054)
||++|+|||| ++.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||+.|++.++
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----G~~~~iaTGR~~~~~~~~~~~~~~~----~~~I~~NGa~i~~~~~ 72 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREK----GIKVVLATGRPYKEVKNILKELGLD----TPFITANGAAVIDDQG 72 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCC----CCEEEcCCcEEECCCC
Confidence 5899999999 467999999999999997 9999999999999999999999883 3799999999997632
Q ss_pred CCCCCCCCccccCccchhhhccccChhhHHHHHHHhh----------------------------hhccCCCCccCcccc
Q 001557 848 STEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWA----------------------------ASVNDKKGEEGKIVE 899 (1054)
Q Consensus 848 ~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~----------------------------~~~~~~~~~~~~~v~ 899 (1054)
.. + .......+.+.+++..+. ....... ..+.
T Consensus 73 ~~--------i--------~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 132 (256)
T TIGR00099 73 EI--------L--------YKKPLDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPK----LEVV 132 (256)
T ss_pred CE--------E--------eecCCCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCc----ceec
Confidence 11 0 000011111111111000 0000000 0000
Q ss_pred c--ccccCcceEEEEEecCCCCCccHHHHHHHHHH--hcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCE
Q 001557 900 E--DESRSTIHCYAFEVTNPQMIPPVKELRKLMRI--QALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNV 975 (1054)
Q Consensus 900 ~--~~~~~~~~kis~~~~~~~~~~~~~el~~~l~~--~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~v 975 (1054)
. ........++.+. .++ ..++++.+.+.. ....+.++.+.+. ++||+|+++|||.||+++++++|++++++
T Consensus 133 ~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~-~leI~~~~~~K~~~i~~~~~~~~~~~~~~ 207 (256)
T TIGR00099 133 DIQYLPDDILKILLLF-LDP---EDLDLLIEALNKLELEENVSVVSSGPY-SIEITAKGVSKGSALQSLAEALGISLEDV 207 (256)
T ss_pred cchhhhcccceEEEEE-CCH---HHHHHHHHHhhhhhhcCCEEEEEecCc-eEEecCCCCChHHHHHHHHHHcCCCHHHE
Confidence 0 0001112223222 222 234555555542 2345777788775 99999999999999999999999999999
Q ss_pred EEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHH
Q 001557 976 VVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASL 1045 (1054)
Q Consensus 976 vaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al 1045 (1054)
++ +||+.| | ++||+.+|.+|||+||. ..++..++ +++.+++++||+++|
T Consensus 208 ~~-~GD~~n-D-~~m~~~~~~~~a~~na~--~~~k~~a~----------------~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 208 IA-FGDGMN-D-IEMLEAAGYGVAMGNAD--EELKALAD----------------YVTDSNNEDGVALAL 256 (256)
T ss_pred EE-eCCcHH-h-HHHHHhCCceeEecCch--HHHHHhCC----------------EEecCCCCcchhhhC
Confidence 99 888888 8 99999999999999988 44444444 788899999999875
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.3e-23 Score=235.78 Aligned_cols=330 Identities=18% Similarity=0.187 Sum_probs=225.6
Q ss_pred CCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcccc
Q 001557 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 269 (1054)
Q Consensus 190 tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~ 269 (1054)
+||..+++.+|+++|.+. | |+|+++|.... .... .....|++++++++....
T Consensus 9 ~gG~~~~~~~la~~l~~~-G-~ev~v~~~~~~---------~~~~-------------~~~~~~~~~~~~~~~~~~---- 60 (350)
T cd03785 9 TGGHIFPALALAEELRER-G-AEVLFLGTKRG---------LEAR-------------LVPKAGIPLHTIPVGGLR---- 60 (350)
T ss_pred chhhhhHHHHHHHHHHhC-C-CEEEEEECCCc---------chhh-------------cccccCCceEEEEecCcC----
Confidence 489999999999999999 8 99999987421 0000 011237788888864321
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHH
Q 001557 270 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLK 349 (1054)
Q Consensus 270 k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~ 349 (1054)
+...+..+..+.. ++..+..+.+.+.+ .+||+||+|...++..+..+++..++|++++.|+....
T Consensus 61 ~~~~~~~~~~~~~-~~~~~~~~~~~i~~-------~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~------- 125 (350)
T cd03785 61 RKGSLKKLKAPFK-LLKGVLQARKILKK-------FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPG------- 125 (350)
T ss_pred CCChHHHHHHHHH-HHHHHHHHHHHHHh-------cCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCcc-------
Confidence 1111111111111 12222222233322 56999999987666767777888899999877754221
Q ss_pred hCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeC
Q 001557 350 QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 429 (1054)
Q Consensus 350 ~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIP 429 (1054)
.. +++.++.+|.|+++|+...+. + .+ .++.+||
T Consensus 126 --------------~~-----~~~~~~~~~~vi~~s~~~~~~----~---~~---------------------~~~~~i~ 158 (350)
T cd03785 126 --------------LA-----NRLLARFADRVALSFPETAKY----F---PK---------------------DKAVVTG 158 (350)
T ss_pred --------------HH-----HHHHHHhhCEEEEcchhhhhc----C---CC---------------------CcEEEEC
Confidence 01 122456799999999866543 1 11 2899999
Q ss_pred CCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCc
Q 001557 430 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELAN 508 (1054)
Q Consensus 430 nGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~~~~~~~ 508 (1054)
||+|.+.+.+... ..++..++++++|+++|+....|+... +++|+..+. .+...
T Consensus 159 n~v~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~--~~~~~ 213 (350)
T cd03785 159 NPVREEILALDRE-----------------------RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL--RKRLQ 213 (350)
T ss_pred CCCchHHhhhhhh-----------------------HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh--ccCeE
Confidence 9999876653210 122333567788888888777777765 458888874 22233
Q ss_pred EEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHH
Q 001557 509 LTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA 588 (1054)
Q Consensus 509 l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAm 588 (1054)
+.+++|.++ ...+.+.+.++ .++|.+.|++ +++..+|+.| |++|.++- +.+++|||
T Consensus 214 ~~~i~G~g~------------~~~l~~~~~~~--~~~v~~~g~~--~~~~~~l~~a----d~~v~~sg----~~t~~Eam 269 (350)
T cd03785 214 VIHQTGKGD------------LEEVKKAYEEL--GVNYEVFPFI--DDMAAAYAAA----DLVISRAG----ASTVAELA 269 (350)
T ss_pred EEEEcCCcc------------HHHHHHHHhcc--CCCeEEeehh--hhHHHHHHhc----CEEEECCC----HhHHHHHH
Confidence 334667762 23444555554 4679999986 7999999999 99998762 68999999
Q ss_pred HcCCCEEEccccC--------cccceeeCCceEEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 001557 589 AYGLPIVATKNGG--------PVDIHRVLDNGLLVDPH--DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCK 658 (1054)
Q Consensus 589 A~G~PVIat~~Gg--------~~eiv~~~~~Gllv~p~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~ 658 (1054)
++|+|||+++.++ ..+.+.+..+|+++++. |+++++++|..++.+++.++++++++++.++.+.-+++++
T Consensus 270 ~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~ 349 (350)
T cd03785 270 ALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLARPDAAERIAD 349 (350)
T ss_pred HhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHh
Confidence 9999999987654 23556667899999987 8999999999999999999999999998888777776654
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-23 Score=235.88 Aligned_cols=326 Identities=19% Similarity=0.191 Sum_probs=216.2
Q ss_pred CcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCccccc
Q 001557 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQK 270 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k 270 (1054)
||......+|+++|.++ | |+|+++|+.. +...+ .....|+.+++++..+.. .
T Consensus 11 ~g~~~~~~~La~~L~~~-g-~eV~vv~~~~---------~~~~~-------------~~~~~g~~~~~i~~~~~~----~ 62 (348)
T TIGR01133 11 GGHIFPALAVAEELIKR-G-VEVLWLGTKR---------GLEKR-------------LVPKAGIEFYFIPVGGLR----R 62 (348)
T ss_pred HHHHhHHHHHHHHHHhC-C-CEEEEEeCCC---------cchhc-------------ccccCCCceEEEeccCcC----C
Confidence 66666667999999999 8 9999998521 00000 011247888888865421 0
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHh
Q 001557 271 ELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQ 350 (1054)
Q Consensus 271 ~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~ 350 (1054)
..+...+..+ ...+..+.++.+.+.+ .+||+||+|.......+..+++..++|+|++.|+....
T Consensus 63 ~~~~~~l~~~-~~~~~~~~~l~~~i~~-------~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~-------- 126 (348)
T TIGR01133 63 KGSFRLIKTP-LKLLKAVFQARRILKK-------FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVPG-------- 126 (348)
T ss_pred CChHHHHHHH-HHHHHHHHHHHHHHHh-------cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCcc--------
Confidence 0110011100 1112222233333332 67999999987666666667777899998655532110
Q ss_pred CCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCC
Q 001557 351 GRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPP 430 (1054)
Q Consensus 351 g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPn 430 (1054)
. .+++..+.+|.+++.|+...+.+ +..+|||
T Consensus 127 -------------~-----~~~~~~~~~d~ii~~~~~~~~~~-------------------------------~~~~i~n 157 (348)
T TIGR01133 127 -------------L-----TNKLLSRFAKKVLISFPGAKDHF-------------------------------EAVLVGN 157 (348)
T ss_pred -------------H-----HHHHHHHHhCeeEECchhHhhcC-------------------------------CceEEcC
Confidence 0 02335678999999998654321 3478999
Q ss_pred CCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCcE
Q 001557 431 GIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELANL 509 (1054)
Q Consensus 431 GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~~~~~~~l 509 (1054)
|++...+.+.. . ..++..+++.++|+++|+....|++.. +++|+..+.. ....+
T Consensus 158 ~v~~~~~~~~~-~----------------------~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~--~~~~~ 212 (348)
T TIGR01133 158 PVRQEIRSLPV-P----------------------RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAE--KGIQI 212 (348)
T ss_pred CcCHHHhcccc-h----------------------hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh--cCcEE
Confidence 99876554211 0 012333467789999998888888765 5588887743 23344
Q ss_pred EEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHH
Q 001557 510 TLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAA 589 (1054)
Q Consensus 510 ~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA 589 (1054)
.++.|+++ ...+.+.+.++++...+.|. . .+++.+|..| |++|.++ | +.+++|||+
T Consensus 213 ~~~~g~~~------------~~~l~~~~~~~~l~~~v~~~---~-~~~~~~l~~a----d~~v~~~---g-~~~l~Ea~~ 268 (348)
T TIGR01133 213 VHQTGKND------------LEKVKNVYQELGIEAIVTFI---D-ENMAAAYAAA----DLVISRA---G-ASTVAELAA 268 (348)
T ss_pred EEECCcch------------HHHHHHHHhhCCceEEecCc---c-cCHHHHHHhC----CEEEECC---C-hhHHHHHHH
Confidence 33445442 24566667777775555565 2 3899999999 9999864 2 789999999
Q ss_pred cCCCEEEccccC-------cccceeeCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 001557 590 YGLPIVATKNGG-------PVDIHRVLDNGLLVDPHD--QQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCK 658 (1054)
Q Consensus 590 ~G~PVIat~~Gg-------~~eiv~~~~~Gllv~p~d--~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~ 658 (1054)
+|+|+|+++.++ ..+++.++.+|+++++.| +++++++|.++++|++.+++|++++++.++.+.-+++++
T Consensus 269 ~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 269 AGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred cCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCccHHHHHHh
Confidence 999999998754 235777888999999876 999999999999999999999999988776666555553
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-22 Score=241.55 Aligned_cols=529 Identities=16% Similarity=0.092 Sum_probs=351.8
Q ss_pred ceEEEEcCCCchHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecC
Q 001557 307 PVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITST 385 (1054)
Q Consensus 307 pDVIh~h~~~a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S 385 (1054)
-|+|-.|++...++..++... ..+.+-+..|+-.+.. +.+. .....+.| -..+..++.+-..+
T Consensus 141 ~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpss-Ei~r------------~lp~r~eI---l~gll~~~~i~f~t 204 (732)
T KOG1050|consen 141 GDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSS-EIYR------------CLPVRKEI---LRGLLYDDLLGFHT 204 (732)
T ss_pred CCcEEEEcchhhccchhhhcccccceEEEeccCCCChH-HHHH------------hcccHHHH---HHhhhccCcccccc
Confidence 577777766444444444443 4556667778754422 1110 00011111 23577888888888
Q ss_pred HHHHHHHHhhhcCCChHHHHHHHHhHh-----cccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCC
Q 001557 386 RQEIEEQWRLYDGFDPVLERKLRARIK-----RGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDP 460 (1054)
Q Consensus 386 ~~~~~~~~~~y~~~~~~l~~~l~~r~~-----~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~ 460 (1054)
.+....+.... -|.+..... -||+..|+.. .+..+|.|||..+|....... ...
T Consensus 205 ~d~arhFls~c-------~R~l~~~~~s~~~~~~v~~rgr~~-~v~~~pigid~~r~v~~~~~~-------------~~~ 263 (732)
T KOG1050|consen 205 DDYARHFLSTC-------SRLLGLEVASKFPTAGVSGRGRDV-SVKALPIGIDVQRFVKLLELP-------------YVG 263 (732)
T ss_pred ccHHHHHHHHH-------HHHHHhhhhccCCcceEEecccee-eeeecccccchHHhhccccch-------------hHH
Confidence 77666544332 233333333 4566667655 789999999999987432110 111
Q ss_pred chhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE------ecCCCchhhhhchHHHHHH
Q 001557 461 PIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM------GNRDDIDEMSGTNAALLLS 532 (1054)
Q Consensus 461 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~LIi------G~~~~~~~~~~~~~~~~~~ 532 (1054)
....+++..+ .++++|+.++|+++.||+..-+.||+++....+.. +++++. +.+..++.++......+.+
T Consensus 264 ~~~~ei~~~~--~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~r 341 (732)
T KOG1050|consen 264 SKGMEIKEPF--KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRR 341 (732)
T ss_pred HHHHHHhhhc--cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhh
Confidence 1222333332 57899999999999999999999999998666554 344322 3444556677777788888
Q ss_pred HHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHc-----CCCEEEccccCccccee
Q 001557 533 ILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY-----GLPIVATKNGGPVDIHR 607 (1054)
Q Consensus 533 i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~-----G~PVIat~~Gg~~eiv~ 607 (1054)
+++........+.+.+...++..++.++|..| |++++.++.+|++++.+|+.+| |..|++..+|.. +..
T Consensus 342 In~~f~~~~~~pV~~~~~~~~~~~l~a~~~Va----ev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~-~tl- 415 (732)
T KOG1050|consen 342 INEKFGSASYQPVHSLLKDLPFLELLALYKVA----EVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDD-TTL- 415 (732)
T ss_pred hhhccCCcccceEEEeeccCCHHHHhhhHHhh----hheeecccccccchhhhHHHHhhcccCCceEEeeecccc-ccc-
Confidence 88888888877778889999999999999999 9999999999999999999999 344555555554 443
Q ss_pred eCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH-HHHhcCCHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCC
Q 001557 608 VLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGL-KNIHQFSWPEHCKSYLSRISSCKQRQPRWQRSDDGLDNSES 686 (1054)
Q Consensus 608 ~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~-~~v~~fsw~~~a~~yl~~l~~~~~~~~~~~~~~~~~~~s~~ 686 (1054)
+...++++|+|.++++.+|..++++++...+++.... +.+..++...|+..++..+.++........+..+
T Consensus 416 -~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~~~~~~~~~~------- 487 (732)
T KOG1050|consen 416 -EDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKVGFLGFRVTP------- 487 (732)
T ss_pred -cccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhhccccccccc-------
Confidence 3468899999999999999999998777666555444 3446788888998888855444322210011100
Q ss_pred CCCCCCccccccccccccccccCCCCCCCCCCCCCcchhhhhccchhhhHHHHHHhhccccCCCccCccCccCCCCCccc
Q 001557 687 DSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALR 766 (1054)
Q Consensus 687 ~~~~~~lr~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 766 (1054)
+ ++ .+.++..|+++++
T Consensus 488 ------~-----l~----------------------------------~~~~i~~y~~s~~------------------- 503 (732)
T KOG1050|consen 488 ------L-----LT----------------------------------AEHIVSDYKKSKK------------------- 503 (732)
T ss_pred ------c-----cC----------------------------------hhHhhhhhhhccc-------------------
Confidence 0 11 2345666776555
Q ss_pred CCCEEEEEEecCCCChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHh-CCCCCCCCcEEEEcCCcEEEcC
Q 001557 767 RRKYVFVIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVS-GGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~-l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
|+|++|+|+|+....+..+...|+.|..+ ++..+.|++||....+..++.. .++ +++++||..+..+
T Consensus 504 ---rli~ldyd~t~~~~~~~~~~~~l~~L~~d---p~n~v~i~s~~~r~~l~~~~~~~~~l------gl~aEhG~f~r~~ 571 (732)
T KOG1050|consen 504 ---RLILLDYDLTLIPPRSIKAISILKDLCSD---PKNIVYIVSGRGRSVLEKWFFGCKNL------GLAAEHGYFVRIP 571 (732)
T ss_pred ---eEEEecccccccCCCCchHHHHHHHHhcC---CCCeEEEEEccCchhhhhhccccccc------eeecccCceeccC
Confidence 99999999999433333377888888887 7788889999999998777633 233 7999999999987
Q ss_pred CCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCC---cc
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMI---PP 922 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~---~~ 922 (1054)
+. |.... .|.+|...+ .+..+.+.++++++..+.+ ...+.|++.+.+.. ..
T Consensus 572 ~~-----w~~~~-~~~~w~~~v-----~~i~~~~~ert~GS~ie~k---------------~~~l~~hy~~ad~~~g~~q 625 (732)
T KOG1050|consen 572 GK-----WETCV-LDLDWKDLV-----KDIFQYYTERTPGSYIERK---------------ETALVWHYRNADPEFGELQ 625 (732)
T ss_pred Cc-----eeeec-ccccHHHHH-----HHHHHHHHhcCCCceeccc---------------CceEEEeeeccCcchhHHH
Confidence 52 11111 233443322 2345667778888777654 34566777655322 23
Q ss_pred HHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcc
Q 001557 923 VKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVH 995 (1054)
Q Consensus 923 ~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag 995 (1054)
+.++...|......+++.. +...+||-|.++|||.|...+...+.-+++.+++ .||... | ++||....
T Consensus 626 A~el~~~l~~~~~~~~v~~--g~~~Vev~~~gvsk~~~~~~~~~~~~~~~df~~c-~g~d~t-D-ed~~~~~~ 693 (732)
T KOG1050|consen 626 AKELLEHLESKNEPVEVVR--GKHIVEVRPQGVSKGLAAERILSEMVKEPDFVLC-IGDDRT-D-EDMFEFIS 693 (732)
T ss_pred HHHHHHHhcccCCCeEEEe--cCceEEEcccccchHHHHHHHHHhcCCCcceEEE-ecCCCC-h-HHHHHHHh
Confidence 4566666655223344433 3348999999999999999999999833444555 777444 8 99998653
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=225.14 Aligned_cols=211 Identities=16% Similarity=0.155 Sum_probs=148.6
Q ss_pred EEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCC
Q 001557 770 YVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPS 846 (1054)
Q Consensus 770 kLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~ 846 (1054)
|+|++|+|||| ++.+++.++++|+++++. |+.|+|||||++..+..+++.++++ .++||+||+.|++.+
T Consensus 2 k~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----g~~~~~~TGR~~~~~~~~~~~l~~~----~~~i~~NGa~i~~~~ 73 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNRMISERAIEAIRKAEKK----GIPVSLVTGNTVPFARALAVLIGTS----GPVVAENGGVIFYNK 73 (215)
T ss_pred cEEEEecCCCcCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCcchhHHHHHHHhCCC----CcEEEccCcEEEeCC
Confidence 79999999999 467999999999999986 9999999999999999999999883 379999999999863
Q ss_pred CCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCccHHHH
Q 001557 847 SSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKEL 926 (1054)
Q Consensus 847 ~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~~~~el 926 (1054)
. ... +.. ....|....... ..++.... .. ........+.. .. ...+.+
T Consensus 74 ~--------~~~----~~~-~~~~~~~~~~~~--~~~~~~~~-----------~~--~~~~~~~~~~~-~~---~~~~~~ 121 (215)
T TIGR01487 74 E--------DIF----LAN-MEEEWFLDEEKK--KRFPRDRL-----------SN--EYPRASLVIMR-EG---KDVDEV 121 (215)
T ss_pred C--------cEE----Eec-ccchhhHHHhhh--hhhhhhhc-----------cc--ccceeEEEEec-CC---ccHHHH
Confidence 1 000 000 000010000000 00000000 00 00011122222 11 234566
Q ss_pred HHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchh
Q 001557 927 RKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGES 1006 (1054)
Q Consensus 927 ~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~ 1006 (1054)
++.+... .+.+..+ +. .+||+|.+++||.|++++++++|++++++++ +||+.| | ++||+.+|.||||+||.
T Consensus 122 ~~~l~~~--~~~~~~~-~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-iGDs~N-D-~~ml~~ag~~vam~na~-- 192 (215)
T TIGR01487 122 REIIKER--GLNLVDS-GF-AIHIMKKGVDKGVGVEKLKELLGIKPEEVAA-IGDSEN-D-IDLFRVVGFKVAVANAD-- 192 (215)
T ss_pred HHHHHhC--CeEEEec-Cc-eEEEecCCCChHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHhCCCeEEcCCcc--
Confidence 6666543 3455444 43 8999999999999999999999999999999 999999 9 99999999999999998
Q ss_pred HHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHH
Q 001557 1007 ARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASL 1045 (1054)
Q Consensus 1007 ~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al 1045 (1054)
.+++..++ ++|.+.+.+||+++|
T Consensus 193 ~~~k~~A~----------------~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 193 DQLKEIAD----------------YVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHHHhCC----------------EEcCCCCCchhhhhC
Confidence 45555444 888899999999875
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-22 Score=231.44 Aligned_cols=347 Identities=17% Similarity=0.177 Sum_probs=253.7
Q ss_pred ccccCCCChHHH----------HHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccC-CCCEEEEeC
Q 001557 269 QKELLWPHIPEF----------VDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGAL-NVPMVFTGH 337 (1054)
Q Consensus 269 ~k~~l~~~l~~f----------~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~-~iP~V~t~H 337 (1054)
.+..|||-+..+ .++.......++..+.+....+ |+|-.|++...+++.++.... ..++.|..|
T Consensus 105 sn~iLWP~~Hy~~~~~~~~~~~w~~Y~~vN~~FAd~i~~~~~~g-----DiIWVhDYhL~L~P~mlR~~~~~~~IgfFlH 179 (486)
T COG0380 105 SNAILWPLFHYFIDDVAYERNWWDAYVKVNRKFADKIVEIYEPG-----DIIWVHDYHLLLVPQMLRERIPDAKIGFFLH 179 (486)
T ss_pred hHhhhcceeeeecCccccchHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEEechhhhhHHHHHHhCCCceEEEEEe
Confidence 345677754432 2333334444555555543332 899999987777777776543 467888999
Q ss_pred CCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhccccc
Q 001557 338 SLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSC 417 (1054)
Q Consensus 338 ~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~ 417 (1054)
-.++..- +.....+.+.| -..+-.||.|-+.|+..+..+..... +.+......++..
T Consensus 180 iPfPssE-------------vfr~lP~r~eI---l~gll~~dligFqt~~y~~nF~~~~~-------r~~~~~~~~~~~~ 236 (486)
T COG0380 180 IPFPSSE-------------VFRCLPWREEI---LEGLLGADLIGFQTESYARNFLDLCS-------RLLGVTGDADIRF 236 (486)
T ss_pred CCCCCHH-------------HHhhCchHHHH---HHHhhcCCeeEecCHHHHHHHHHHHH-------Hhccccccccccc
Confidence 7665431 11111111111 23577999999999998887665543 2332222233333
Q ss_pred C---CCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHH
Q 001557 418 H---GRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLV 494 (1054)
Q Consensus 418 ~---g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll 494 (1054)
- |+. .++..+|.|||+..|.....+ ......+.++.+.+. .++++|+.++|+|+.||+...+
T Consensus 237 ~~~~~~~-v~v~a~PIgID~~~~~~~~~~-------------~~v~~~~~el~~~~~-~~~kiivgvDRlDy~kGi~~rl 301 (486)
T COG0380 237 NGADGRI-VKVGAFPIGIDPEEFERALKS-------------PSVQEKVLELKAELG-RNKKLIVGVDRLDYSKGIPQRL 301 (486)
T ss_pred cccCCce-EEEEEEeeecCHHHHHHhhcC-------------CchhhHHHHHHHHhc-CCceEEEEehhcccccCcHHHH
Confidence 3 233 389999999999999743211 112234555655553 3389999999999999999999
Q ss_pred HHHHhcccccCCC--cEEEEE------ecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhc
Q 001557 495 KAFGECRPLRELA--NLTLIM------GNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 566 (1054)
Q Consensus 495 ~A~~~l~~~~~~~--~l~LIi------G~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~ 566 (1054)
.||++|+..+|.. +++++. ++.+.|..+..+..+.+++|++.++..++.|..++...++++++.++|+.|
T Consensus 302 ~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~a-- 379 (486)
T COG0380 302 LAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAA-- 379 (486)
T ss_pred HHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhh--
Confidence 9999998767665 444432 334455567788889999999999999999999999999999999999999
Q ss_pred CCcEEEecCCCCCCcHHHHHHHHc-----CCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001557 567 TKGVFINPAFIEPFGLTLIEAAAY-----GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCR 641 (1054)
Q Consensus 567 ~~dv~v~ps~~Egfgl~l~EAmA~-----G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~ 641 (1054)
|+++++|++|||+||.+||.|| |..|++..+|+..++ ..+++|||+|.+++|++|.++|+++.+.++.+
T Consensus 380 --Dv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L----~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r 453 (486)
T COG0380 380 --DVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL----RDALIVNPWDTKEVADAIKRALTMSLEERKER 453 (486)
T ss_pred --ceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhh----ccCEeECCCChHHHHHHHHHHhcCCHHHHHHH
Confidence 9999999999999999999999 889999999999988 45999999999999999999999766655554
Q ss_pred -HHHHHHHhcCCHHHHHHHHHHHHHH
Q 001557 642 -QNGLKNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 642 -~~~~~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
+..++.+..++...|+..|++.+..
T Consensus 454 ~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 454 HEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 4455556899999999999998885
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-23 Score=242.26 Aligned_cols=325 Identities=16% Similarity=0.135 Sum_probs=208.2
Q ss_pred HHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHH
Q 001557 289 IQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRR 367 (1054)
Q Consensus 289 ~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~r 367 (1054)
..++..+.+.+. .-|+|-.|++...+++.++.+. .+.++.|..|-.++..- .+ ....+...
T Consensus 129 ~~FA~~i~~~~~-----~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e-~f------------r~lP~r~e 190 (474)
T PF00982_consen 129 RRFADAIAEVYR-----PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSE-IF------------RCLPWREE 190 (474)
T ss_dssp HHHHHHHGGG-------TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HH-HH------------TTSTTHHH
T ss_pred HHHHHHHHHhCc-----CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHH-HH------------hhCCcHHH
Confidence 445555555544 2589999998777777777654 46788999998765331 11 01111111
Q ss_pred HHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhc---ccccCCCCCCcEEEeCCCCcCCCcccCCCCC
Q 001557 368 IEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKR---GVSCHGRFMPRMVVIPPGIEFHHIVRHNGDV 444 (1054)
Q Consensus 368 i~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~---gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~ 444 (1054)
| -..+-.||+|-+.|...++.+.... .+.++.+... ++...|+.. ++.++|.|||++.|......
T Consensus 191 i---L~glL~aDlIgFqt~~~~~nFl~~~-------~r~lg~~~~~~~~~v~~~Gr~v-~v~~~pigId~~~~~~~~~~- 258 (474)
T PF00982_consen 191 I---LRGLLGADLIGFQTFEYARNFLSCC-------KRLLGLEVDSDRGTVEYNGRRV-RVGVFPIGIDPDAFAQLARS- 258 (474)
T ss_dssp H---HHHHTTSSEEEESSHHHHHHHHHHH-------HHHS-EEEEETTE-EEETTEEE-EEEE------HHHHHHHHH--
T ss_pred H---HHHhhcCCEEEEecHHHHHHHHHHH-------HHHcCCcccCCCceEEECCEEE-EEEEeeccCChHHHHhhccC-
Confidence 1 2357799999999999888765532 2232222222 466666666 89999999999998732111
Q ss_pred CCcccccCCCCCCCCCchhHHHhhhcCCCC-CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE------ec
Q 001557 445 DGEVERDEGSPASPDPPIWSEIMHFFSNPR-KPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM------GN 515 (1054)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~LIi------G~ 515 (1054)
.........++..+ .+ .++|+.++|+|+.|||...++||+.|.+.+|.. +++|+- .+
T Consensus 259 ------------~~v~~~~~~l~~~~--~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~ 324 (474)
T PF00982_consen 259 ------------PEVQERAEELREKF--KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSRED 324 (474)
T ss_dssp ------------S---HHHHHHHHHT--TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STT
T ss_pred ------------hHHHHHHHHHHHhc--CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCcc
Confidence 12233344454444 34 589999999999999999999999998777664 465532 23
Q ss_pred CCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHc-----
Q 001557 516 RDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY----- 590 (1054)
Q Consensus 516 ~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~----- 590 (1054)
.++|++++.+..+.+++||+..++.++.+.+++.+.++++++.++|+.| ||++++|++|||+|+.+||+||
T Consensus 325 ~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~a----Dv~lvTslrDGmNLva~Eyva~q~~~~ 400 (474)
T PF00982_consen 325 VPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAA----DVALVTSLRDGMNLVAKEYVACQDDNP 400 (474)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-----SEEEE--SSBS--HHHHHHHHHS-TS-
T ss_pred chhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhh----hhEEecchhhccCCcceEEEEEecCCC
Confidence 3456678888899999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCEEEccccCcccceeeCCce-EEeCCCCHHHHHHHHHHHHhCHHHHHHH-HHHHHHHHhcCCHHHHHHHHHHHHH
Q 001557 591 GLPIVATKNGGPVDIHRVLDNG-LLVDPHDQQSIADALLKLVSDKQLWERC-RQNGLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 591 G~PVIat~~Gg~~eiv~~~~~G-llv~p~d~~~la~aI~~ll~d~~~~~~~-~~~~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
|+.|++..+|+..++ ..| ++|||+|++++|+||.++|+++.+.++. .+..++.+..++...|++.|++.++
T Consensus 401 GvLiLSefaGaa~~L----~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 401 GVLILSEFAGAAEQL----SEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLK 473 (474)
T ss_dssp -EEEEETTBGGGGT-----TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHH
T ss_pred CceEeeccCCHHHHc----CCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhh
Confidence 778899989988777 434 9999999999999999999977655444 4555666799999999999999876
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.4e-23 Score=226.78 Aligned_cols=245 Identities=16% Similarity=0.119 Sum_probs=153.7
Q ss_pred CEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
.|+|++|+|||| .+.+++.++++|++++++ |+.|+|||||++..+..+++++++. +++||.||+.||++
T Consensus 4 ~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~----Gi~~~iaTgR~~~~~~~~~~~l~l~----~~~i~~nGa~i~~~ 75 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHTYSYEPAKPALKALKEK----GIPVIPCTSKTAAEVEVLRKELGLE----DPFIVENGAAIYIP 75 (273)
T ss_pred ceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCCC----CCEEEEcCcEEEec
Confidence 689999999999 356888999999999986 9999999999999999999999983 47999999999975
Q ss_pred CCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhh-c--cCCC-Ccc-------Cccccc--ccccCcceEEEE
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAAS-V--NDKK-GEE-------GKIVEE--DESRSTIHCYAF 912 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~-~--~~~~-~~~-------~~~v~~--~~~~~~~~kis~ 912 (1054)
+.............+..|. +......+.+.+++..+... . .... ... ...-.+ ........+..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PRK00192 76 KNYFPFQPDGERLKGDYWV--IELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPF 153 (273)
T ss_pred ccccccCCccccccCCceE--EEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCce
Confidence 4210000000000000110 11122333333333222110 0 0000 000 000000 000001111112
Q ss_pred E-ecCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCc-cCEEEEeCcCCCcccccc
Q 001557 913 E-VTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDL-SNVVVIAGECGDTDYEGL 990 (1054)
Q Consensus 913 ~-~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~-e~vvaf~GD~~d~D~~eM 990 (1054)
. ... ....+.+.+.+...+ +.++.+ + +++||+|.+ |||.|+++|++++|+++ +++++ +||+.| | ++|
T Consensus 154 ~~~~~---~~~~~~~~~~l~~~~--~~~~~~-~-~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~-~GDs~N-D-i~m 222 (273)
T PRK00192 154 LWNGS---EAAKERFEEALKRLG--LKVTRG-G-RFLHLLGGG-DKGKAVRWLKELYRRQDGVETIA-LGDSPN-D-LPM 222 (273)
T ss_pred eecCc---hHHHHHHHHHHHHcC--CEEEEC-C-eEEEEeCCC-CHHHHHHHHHHHHhccCCceEEE-EcCChh-h-HHH
Confidence 2 111 124556666665433 444443 4 499999999 99999999999999999 99999 888888 8 999
Q ss_pred ccCcceEEEecCcchhHHhh----hhccCCCcccccccCCCceEEeccccCHHHHHHHHHH-hc
Q 001557 991 LGGVHKTVILKGVGESARKL----HANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEK-LG 1049 (1054)
Q Consensus 991 L~~ag~gVaMgNa~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~-~~ 1049 (1054)
|+.+|++|||+||. .+++ ..++ ...++|.+...|||+++|++ ||
T Consensus 223 ~~~ag~~vam~NA~--~~~k~~~~~~a~-------------~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 223 LEAADIAVVVPGPD--GPNPPLLPGIAD-------------GEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred HHhCCeeEEeCCCC--CCCcccCccccC-------------CceEEecCCCcHHHHHHHHHHHh
Confidence 99999999999999 2111 1110 23345578889999999997 44
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=216.20 Aligned_cols=195 Identities=12% Similarity=0.040 Sum_probs=133.0
Q ss_pred CCEEEEEEecCCCC--------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCC
Q 001557 768 RKYVFVIAADCDTT--------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSG 839 (1054)
Q Consensus 768 ~kkLiv~DiDGTL~--------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nG 839 (1054)
.+.+|++|+||||. +.+++.++++|++|++. +|+.|+|+|||++..+.++++.+++ .+||+||
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~---~g~~v~i~SGR~~~~~~~~~~~~~~------~~i~~nG 83 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATA---NDGALALISGRSMVELDALAKPYRF------PLAGVHG 83 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhC---CCCcEEEEeCCCHHHHHHhcCcccc------eEEEeCC
Confidence 36899999999992 36889999999999984 5899999999999999999987765 4899999
Q ss_pred cEEEcCCCCCCCCCCCccccCccchhhhccccChhh---HHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecC
Q 001557 840 SELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEG---LRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTN 916 (1054)
Q Consensus 840 a~I~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~---l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~ 916 (1054)
++|+..++ .. +...+...|..+. +++.+.+.++...+.+ ...++++++.
T Consensus 84 a~i~~~~~--------~~-----~~~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k---------------~~~~~~h~r~ 135 (266)
T PRK10187 84 AERRDING--------KT-----HIVHLPDAIARDISVQLHTALAQLPGAELEAK---------------GMAFALHYRQ 135 (266)
T ss_pred CeeecCCC--------Ce-----eeccCChhHHHHHHHHHHHHhccCCCcEEEeC---------------CcEEEEECCC
Confidence 99986531 00 1111222221111 1111222223222221 2334455533
Q ss_pred CCC-CccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCc-
Q 001557 917 PQM-IPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV- 994 (1054)
Q Consensus 917 ~~~-~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~a- 994 (1054)
... ...+.++.+.+......+ .+.+.+ .++||.|+++|||.||++|++++|++.+++++ +||+.| | ++||+.+
T Consensus 136 ~~~~~~~~~~l~~~i~~~~~~~-~~~~g~-~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~-~GD~~n-D-~~mf~~~~ 210 (266)
T PRK10187 136 APQHEDALLALAQRITQIWPQL-ALQPGK-CVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF-VGDDLT-D-EAGFAVVN 210 (266)
T ss_pred CCccHHHHHHHHHHHHhhCCce-EEeCCC-EEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE-EcCCcc-H-HHHHHHHH
Confidence 221 122334444443333222 334444 59999999999999999999999999999888 788888 8 9999999
Q ss_pred ---ceEEEecCcc
Q 001557 995 ---HKTVILKGVG 1004 (1054)
Q Consensus 995 ---g~gVaMgNa~ 1004 (1054)
|.||+|||+.
T Consensus 211 ~~~g~~vavg~a~ 223 (266)
T PRK10187 211 RLGGISVKVGTGA 223 (266)
T ss_pred hcCCeEEEECCCC
Confidence 9999999987
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-20 Score=219.56 Aligned_cols=283 Identities=15% Similarity=0.196 Sum_probs=188.5
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+||+||++...........++..++|+|++.|.+....... ++...+ .++..++.+|.|++.
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~s~~~---------------~~~~~~--~~r~~~~~~d~ii~~ 185 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSERSFKR---------------YQKFKR--FYRLLFKNIDLVLAQ 185 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChhhHHH---------------HHHHHH--HHHHHHHhCCEEEEC
Confidence 569999988543222223345667999998876543222111 111111 234568899999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+.. +|.+.. +.++||+ +++.+.+.. .......
T Consensus 186 S~~~~~~l~~-----------------------~g~~~~-i~vi~n~-~~d~~~~~~----------------~~~~~~~ 224 (425)
T PRK05749 186 SEEDAERFLA-----------------------LGAKNE-VTVTGNL-KFDIEVPPE----------------LAARAAT 224 (425)
T ss_pred CHHHHHHHHH-----------------------cCCCCC-cEecccc-cccCCCChh----------------hHHHHHH
Confidence 9987766432 122223 7788874 333332110 0001111
Q ss_pred HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCC
Q 001557 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~ 543 (1054)
.+..+. +++++|+++|+. .|+...+++|+..+.+. .+++.| |+|.++.. ..++.+++.++++.
T Consensus 225 ~r~~~~--~~~~vil~~~~~--~~~~~~ll~A~~~l~~~--~~~~~liivG~g~~r----------~~~l~~~~~~~gl~ 288 (425)
T PRK05749 225 LRRQLA--PNRPVWIAASTH--EGEEELVLDAHRALLKQ--FPNLLLILVPRHPER----------FKEVEELLKKAGLS 288 (425)
T ss_pred HHHHhc--CCCcEEEEeCCC--chHHHHHHHHHHHHHHh--CCCcEEEEcCCChhh----------HHHHHHHHHhCCCc
Confidence 122222 567888888874 68899999999988543 356655 66776531 24577778888875
Q ss_pred CCEEeCCCCC------------CCcHHHHHHHhhcCCcEEEe-cCCCCCCcHHHHHHHHcCCCEEEccc-cCcccceeeC
Q 001557 544 GQVAYPKHHK------------QSDVPDIYRLAAKTKGVFIN-PAFIEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRVL 609 (1054)
Q Consensus 544 ~~V~~~g~~~------------~~dl~~ly~~Aa~~~dv~v~-ps~~Egfgl~l~EAmA~G~PVIat~~-Gg~~eiv~~~ 609 (1054)
. +.+.+... ..+++.+|+.| |++++ +|+.|++|++++||||||+|||+++. ++..+++...
T Consensus 289 ~-~~~~~~~~~~~~~~v~l~~~~~el~~~y~~a----Di~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~ 363 (425)
T PRK05749 289 Y-VRRSQGEPPSADTDVLLGDTMGELGLLYAIA----DIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL 363 (425)
T ss_pred E-EEccCCCCCCCCCcEEEEecHHHHHHHHHhC----CEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH
Confidence 2 44443211 35899999999 99655 67889999999999999999999875 5566665442
Q ss_pred -CceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 001557 610 -DNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCK 668 (1054)
Q Consensus 610 -~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~ 668 (1054)
.+|+++.|.|+++++++|.++++|++.+++|++++++.++.. ...++++++.+...+
T Consensus 364 ~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~~~l 421 (425)
T PRK05749 364 LQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN--QGALQRTLQLLEPYL 421 (425)
T ss_pred HHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHhc
Confidence 468888899999999999999999999999999999999533 255677777776544
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-20 Score=220.35 Aligned_cols=257 Identities=12% Similarity=0.163 Sum_probs=167.5
Q ss_pred CccCCCCCcccCCCEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCc
Q 001557 756 NVASGKFPALRRRKYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFD 832 (1054)
Q Consensus 756 ~~~~~~~p~~~~~kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d 832 (1054)
+.+++..|.....+|+|++|+|||| ++.+++.++++|++++++ |+.|++||||++..+..+++++++. +
T Consensus 403 ~~~~~~~~~~~~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ek----GI~~VIATGRs~~~i~~l~~~Lgl~----~ 474 (694)
T PRK14502 403 AARPSRLPSSGQFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDK----ELPLVFCSAKTMGEQDLYRNELGIK----D 474 (694)
T ss_pred hhhcccCCCcCceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHcCCC----C
Confidence 4567777877888999999999999 245677899999999987 9999999999999999999999983 5
Q ss_pred EEEEcCCcEEEcCCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhcc---C----C-----CCccCc----
Q 001557 833 AFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVN---D----K-----KGEEGK---- 896 (1054)
Q Consensus 833 ~lI~~nGa~I~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~---~----~-----~~~~~~---- 896 (1054)
++||+||+.|+.+.+.........-..+ .+. .....+..+.+++++..+..... . . ......
T Consensus 475 ~~I~eNGA~I~~~~~~~~~~~~~~~~~~-~~i-I~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~e 552 (694)
T PRK14502 475 PFITENGGAIFIPKDYFRLPFAYDRVAG-NYL-VIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVED 552 (694)
T ss_pred eEEEcCCCEEEECCCcccccccccccCC-CeE-EEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHH
Confidence 7999999999986531100000000000 000 11223344444444433222100 0 0 000000
Q ss_pred ----------ccccccccCcceEEEEEecCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHH
Q 001557 897 ----------IVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHV 966 (1054)
Q Consensus 897 ----------~v~~~~~~~~~~kis~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~ 966 (1054)
...+........|+.+. .++ ..++++.+.+...+ +++.. +.+++||+ .++|||+||++|++
T Consensus 553 i~~~TgL~~~~a~~a~~Re~seKIl~~-gd~---e~Leel~~~L~~~~--l~v~~--g~rfleI~-~gvdKG~AL~~L~e 623 (694)
T PRK14502 553 VSRLTDLNLKQAELAKQREYSETVHIE-GDK---RSTNIVLNHIQQSG--LEYSF--GGRFYEVT-GGNDKGKAIKILNE 623 (694)
T ss_pred HHHhhCCCHHHHHHHhhccCceeEEEc-CCH---HHHHHHHHHHHHcC--cEEEE--CCEEEEeC-CCCCHHHHHHHHHH
Confidence 00000001122455443 222 35667777777653 44443 44699999 59999999999999
Q ss_pred HhCCCccCEEEE-eCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHH
Q 001557 967 RWGIDLSNVVVI-AGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASL 1045 (1054)
Q Consensus 967 ~~gI~~e~vvaf-~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al 1045 (1054)
++|++.+++++| +||+.| | ++||+.+|.||||++-. ..|+ ++ ..++.. .|+.+.+.|=.+|+
T Consensus 624 ~~gI~~~eViafalGDs~N-D-isMLe~Ag~gVAM~~~~---------~~~~--~l---~~~~~~-~~~~~GP~GW~eai 686 (694)
T PRK14502 624 LFRLNFGNIHTFGLGDSEN-D-YSMLETVDSPILVQRPG---------NKWH--KM---RLRNPS-YVKGVGPEGFSRAV 686 (694)
T ss_pred HhCCCccceEEEEcCCcHh-h-HHHHHhCCceEEEcCCC---------CCCC--cc---CCCCce-ecCCCCcHHHHHHH
Confidence 999999999994 299999 9 99999999999998766 1111 11 123444 55889999999998
Q ss_pred HHh
Q 001557 1046 EKL 1048 (1054)
Q Consensus 1046 ~~~ 1048 (1054)
.++
T Consensus 687 ~~~ 689 (694)
T PRK14502 687 TDI 689 (694)
T ss_pred HHH
Confidence 775
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-19 Score=208.32 Aligned_cols=266 Identities=19% Similarity=0.163 Sum_probs=177.4
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
....|++++.+.+..++.. ..+.++|+.+++.+.... +. .. ... ..|+.+++.||.|+++
T Consensus 101 ~~~~i~~~~~P~~~~~~~~---~~~~~~Vyd~~D~~~~~~------~~-~~--------~~~--~~e~~~~~~ad~vi~~ 160 (373)
T cd04950 101 FGRPILWYYTPYTLPVAAL---LQASLVVYDCVDDLSAFP------GG-PP--------ELL--EAERRLLKRADLVFTT 160 (373)
T ss_pred CCCcEEEEeCccHHHHHhh---cCCCeEEEEcccchhccC------CC-CH--------HHH--HHHHHHHHhCCEEEEC
Confidence 3456777665544433333 568899999998644321 10 11 001 3477789999999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+.. +. +++.+||||+|.+.|.+..... ..
T Consensus 161 S~~l~~~~~~-~~-------------------------~~i~~i~ngvd~~~f~~~~~~~--------------~~---- 196 (373)
T cd04950 161 SPSLYEAKRR-LN-------------------------PNVVLVPNGVDYEHFAAARDPP--------------PP---- 196 (373)
T ss_pred CHHHHHHHhh-CC-------------------------CCEEEcccccCHHHhhcccccC--------------CC----
Confidence 9977654322 11 2899999999999987532110 00
Q ss_pred HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCC
Q 001557 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 544 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~ 544 (1054)
.+.....++++|+|+|++++.++++.+.++... .++..+ +++|.++..... ..+.-.+
T Consensus 197 --~~~~~~~~~~~i~y~G~l~~~~d~~ll~~la~~----~p~~~~-vliG~~~~~~~~---------------~~~~~~~ 254 (373)
T cd04950 197 --PADLAALPRPVIGYYGAIAEWLDLELLEALAKA----RPDWSF-VLIGPVDVSIDP---------------SALLRLP 254 (373)
T ss_pred --hhHHhcCCCCEEEEEeccccccCHHHHHHHHHH----CCCCEE-EEECCCcCccCh---------------hHhccCC
Confidence 001123567899999999998888766555443 233333 367776321110 1111246
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCC-----CCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCC
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFI-----EPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHD 619 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~-----Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d 619 (1054)
+|.|+|+++.++++.+|+.| |++|+|+.. +++|++++||||||+|||+|+.++..+. ...++++ +.|
T Consensus 255 nV~~~G~~~~~~l~~~l~~~----Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~~---~~~~~~~-~~d 326 (373)
T cd04950 255 NVHYLGPKPYKELPAYLAGF----DVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRRY---EDEVVLI-ADD 326 (373)
T ss_pred CEEEeCCCCHHHHHHHHHhC----CEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHhh---cCcEEEe-CCC
Confidence 89999999999999999999 999999753 4679999999999999999987655443 3334444 679
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001557 620 QQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 620 ~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
+++++++|.+++.++...... +..+.++.|||+..++++++.+.+
T Consensus 327 ~~~~~~ai~~~l~~~~~~~~~--~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 327 PEEFVAAIEKALLEDGPARER--RRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHHHHHhcCCchHHH--HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 999999999987643222111 222245799999999999977654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.8e-19 Score=207.18 Aligned_cols=263 Identities=14% Similarity=0.091 Sum_probs=179.2
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+||+||++++......+..+...++|++.+.++++... .++++.+|.++++
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~----------------------------~~~~~~ad~i~~~ 154 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK----------------------------IWVHREVDRYFVA 154 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc----------------------------ccccCCCCEEEEC
Confidence 569999998765544444444567899887666643211 1246789999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+.+ + |.+..++.++++.++. .|.+.. ....
T Consensus 155 s~~~~~~l~~-~----------------------gi~~~ki~v~G~p~~~-~f~~~~-------------------~~~~ 191 (380)
T PRK13609 155 TDHVKKVLVD-I----------------------GVPPEQVVETGIPIRS-SFELKI-------------------NPDI 191 (380)
T ss_pred CHHHHHHHHH-c----------------------CCChhHEEEECcccCh-HHcCcC-------------------CHHH
Confidence 9877665432 1 1122377777655543 232110 0112
Q ss_pred HHhhhcCCCCCcE-EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 465 EIMHFFSNPRKPM-ILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 465 ~~~~~~~~~~~~~-Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
.+.++..++++++ +++.|++...||+..+++++... +++.+ ++|++. ......+.+++..++
T Consensus 192 ~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~~------~~~~~viv~G~~---------~~~~~~l~~~~~~~~- 255 (380)
T PRK13609 192 IYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMSV------PDLQVVVVCGKN---------EALKQSLEDLQETNP- 255 (380)
T ss_pred HHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC------CCcEEEEEeCCC---------HHHHHHHHHHHhcCC-
Confidence 2334444556665 45568888889999999988643 33443 343322 112345566665554
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc-ccCcc----cceeeCCceEEeCC
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-NGGPV----DIHRVLDNGLLVDP 617 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~-~Gg~~----eiv~~~~~Gllv~p 617 (1054)
.+|.|+|++ ++++++|+.| |++|. ++.|++++||||||+|||+++ .+|.. +++. .+|+.+.+
T Consensus 256 -~~v~~~g~~--~~~~~l~~~a----D~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~--~~G~~~~~ 322 (380)
T PRK13609 256 -DALKVFGYV--ENIDELFRVT----SCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFE--RKGAAVVI 322 (380)
T ss_pred -CcEEEEech--hhHHHHHHhc----cEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH--hCCcEEEE
Confidence 579999996 4799999999 99884 566999999999999999986 55532 2222 24555556
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 001557 618 HDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~ 667 (1054)
.|+++++++|.++++|++.+++|++++++....++++.+++.+++.+...
T Consensus 323 ~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 323 RDDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred CCHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 79999999999999999999999999988777889999999999888654
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-20 Score=204.73 Aligned_cols=206 Identities=12% Similarity=0.056 Sum_probs=127.0
Q ss_pred CCEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEc
Q 001557 768 RKYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYY 844 (1054)
Q Consensus 768 ~kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~ 844 (1054)
..|||++|+|||| ++++++.++++|++++++ |+.|+|||||++..+.+.++..... ..+++||+||+.|+.
T Consensus 4 ~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~l~~~~~~--~~~~~I~~NGa~I~~ 77 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSK----GFKIGVVGGSDYPKIKEQLGEDVLE--DFDYVFSENGLVAYK 77 (247)
T ss_pred CCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHhhhhhc--ccCeEEeCCceEEEE
Confidence 4699999999999 467999999999999997 9999999999999998888754321 235789999999996
Q ss_pred CCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhh----hccCCCCccCcccccccccCcceEEEEEecC----
Q 001557 845 PSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAA----SVNDKKGEEGKIVEEDESRSTIHCYAFEVTN---- 916 (1054)
Q Consensus 845 ~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~---- 916 (1054)
.+ +.+ +...+......+.+.+++..... ...... ...+...... ..........
T Consensus 78 ~~---------~~i----~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~ 139 (247)
T PTZ00174 78 DG---------ELF----HSQSILKFLGEEKLKKFINFCLRYIADLDIPVK---RGTFIEYRNG--MINISPIGRNCSQE 139 (247)
T ss_pred CC---------eEE----EEEcchhcCCHHHHHHHHHHHHHHHHhcCCccc---eeeeEEcCCc--eEEeccccccCCHH
Confidence 42 111 11111111122333333321111 000000 0001000000 0000000000
Q ss_pred --------CCCCccHHHHHHHHHHhcCeEEEEEeeC-CeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCc----CC
Q 001557 917 --------PQMIPPVKELRKLMRIQALRCHVIYCQN-GTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE----CG 983 (1054)
Q Consensus 917 --------~~~~~~~~el~~~l~~~~~~~~v~~s~~-~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD----~~ 983 (1054)
........++.+.+......+.+.++.+ ..++||+|+++|||.||++|+++ +++++| ||| +.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----~~evia-fGD~~~~~~ 214 (247)
T PTZ00174 140 ERDEFEKYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----FKEIHF-FGDKTFEGG 214 (247)
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----hhhEEE-EcccCCCCC
Confidence 0001123456666655444456666654 24899999999999999999998 589999 888 78
Q ss_pred CccccccccCc-ceEEEecCcc
Q 001557 984 DTDYEGLLGGV-HKTVILKGVG 1004 (1054)
Q Consensus 984 d~D~~eML~~a-g~gVaMgNa~ 1004 (1054)
| | ++||+.+ -.|+.++||.
T Consensus 215 N-D-ieMl~~~~~~g~~v~n~~ 234 (247)
T PTZ00174 215 N-D-YEIYNDPRTIGHSVKNPE 234 (247)
T ss_pred C-c-HhhhhcCCCceEEeCCHH
Confidence 8 8 9999965 3556666887
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-20 Score=201.95 Aligned_cols=204 Identities=15% Similarity=0.068 Sum_probs=129.0
Q ss_pred EEEEEecCCC-C--hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCC
Q 001557 771 VFVIAADCDT-T--SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSS 847 (1054)
Q Consensus 771 Liv~DiDGTL-~--~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~ 847 (1054)
+|++|+|||| + +.+++.++++|+++++. |+.|++||||++..+..+++.+++. ..++||+||+.|+....
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~----gi~~~i~TgR~~~~~~~~~~~l~~~---~~~~I~~NGa~i~~~~~ 73 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEA----GIPVILCTSKTAAEVEYLQKALGLT---GDPYIAENGAAIHLEEL 73 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCCC---CCcEEEeCCcEEEcCcc
Confidence 5899999999 2 33555599999999986 9999999999999999999999983 14799999999997531
Q ss_pred CCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhh---ccCCCCcc-C-------ccccc--ccccCcceEEEEEe
Q 001557 848 STEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAAS---VNDKKGEE-G-------KIVEE--DESRSTIHCYAFEV 914 (1054)
Q Consensus 848 ~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~---~~~~~~~~-~-------~~v~~--~~~~~~~~kis~~~ 914 (1054)
... . ..|.. +......+.+.+.+..+... ........ . ..-.. ........++.+..
T Consensus 74 ~~~-------~--~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (221)
T TIGR02463 74 WRE-------E--PGYPR-IILGISYGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLW 143 (221)
T ss_pred ccc-------C--CCceE-EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEe
Confidence 100 0 00000 01111222222222111000 00000000 0 00000 00000112223333
Q ss_pred -cCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccC
Q 001557 915 -TNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGG 993 (1054)
Q Consensus 915 -~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ 993 (1054)
.+ ....+++++.+...+ +.+..+ +. ++||+|.+++||.|+++|++++||+++++++ +||+.| | ++||+.
T Consensus 144 ~~~---~~~~~~~~~~l~~~~--~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~-~GD~~N-D-i~ml~~ 213 (221)
T TIGR02463 144 RDS---DSRMPRFTALLADLG--LAIVQG-NR-FSHVLGASSSKGKAANWLKATYNQPDVKTLG-LGDGPN-D-LPLLEV 213 (221)
T ss_pred cCc---hhHHHHHHHHHHHcC--CeEEec-CC-eeEEecCCCCHHHHHHHHHHHhCCCCCcEEE-ECCCHH-H-HHHHHh
Confidence 21 124556666665543 444444 43 8999999999999999999999999999999 999999 9 999999
Q ss_pred cceEEEec
Q 001557 994 VHKTVILK 1001 (1054)
Q Consensus 994 ag~gVaMg 1001 (1054)
+|.|||+.
T Consensus 214 ag~~va~~ 221 (221)
T TIGR02463 214 ADYAVVIK 221 (221)
T ss_pred CCceEEeC
Confidence 99999973
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.3e-19 Score=204.02 Aligned_cols=264 Identities=14% Similarity=0.086 Sum_probs=183.3
Q ss_pred CcceEEEEcCCC-chHHHHHHH-----ccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccC
Q 001557 305 IWPVAIHGHYAD-AGDAAALLS-----GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDAS 378 (1054)
Q Consensus 305 ~~pDVIh~h~~~-a~~~a~~l~-----~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~a 378 (1054)
.+||+||++.+. .+..+..++ ...++|++.++++++... ..+..+.+
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~---------------------------~~w~~~~~ 151 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH---------------------------PTWFHKGV 151 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC---------------------------cccccCCC
Confidence 569999997642 222222222 235899998888763110 01246789
Q ss_pred CEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCC
Q 001557 379 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASP 458 (1054)
Q Consensus 379 d~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~ 458 (1054)
|.++++|+...+.+... +.. .+++.+++++++.+.+.+.
T Consensus 152 d~~~~~s~~~~~~l~~~--g~~---------------------~~ki~v~g~~v~~~f~~~~------------------ 190 (382)
T PLN02605 152 TRCFCPSEEVAKRALKR--GLE---------------------PSQIRVYGLPIRPSFARAV------------------ 190 (382)
T ss_pred CEEEECCHHHHHHHHHc--CCC---------------------HHHEEEECcccCHhhccCC------------------
Confidence 99999998776654332 122 2389999999986543321
Q ss_pred CCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc----cCCCcEEEEEecCCCchhhhhchHHHHHHHH
Q 001557 459 DPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPL----RELANLTLIMGNRDDIDEMSGTNAALLLSIL 534 (1054)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~----~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~ 534 (1054)
......+.++..++++++|+++|+....|++..+++++..+... .+...+.+++|.++. ...++.
T Consensus 191 -~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~----------~~~~L~ 259 (382)
T PLN02605 191 -RPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK----------LQSKLE 259 (382)
T ss_pred -CCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH----------HHHHHH
Confidence 11122345566677899999999999999999999999765310 122234346665421 122232
Q ss_pred HHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc------cCcccceee
Q 001557 535 KLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN------GGPVDIHRV 608 (1054)
Q Consensus 535 ~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~------Gg~~eiv~~ 608 (1054)
+. .....|.|+|++ ++++++|++| |++|.++ .|+++.||||||+|||+++. |+...++ +
T Consensus 260 ~~----~~~~~v~~~G~~--~~~~~l~~aa----Dv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~-~ 324 (382)
T PLN02605 260 SR----DWKIPVKVRGFV--TNMEEWMGAC----DCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNVPYVV-D 324 (382)
T ss_pred hh----cccCCeEEEecc--ccHHHHHHhC----CEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhHHHHH-h
Confidence 22 223468999997 4899999999 9999865 48899999999999999984 4443344 4
Q ss_pred CCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001557 609 LDNGLLVDPHDQQSIADALLKLVSD-KQLWERCRQNGLKNIHQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 609 ~~~Gllv~p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l 664 (1054)
.+.|+++ .|+++++++|.+++.+ ++.+++|++++++.....+++.+++.+.+..
T Consensus 325 ~g~g~~~--~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 325 NGFGAFS--ESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHELV 379 (382)
T ss_pred CCceeec--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHh
Confidence 5567665 6999999999999998 9999999999999888888888887776554
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.3e-19 Score=204.51 Aligned_cols=267 Identities=14% Similarity=0.139 Sum_probs=180.1
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+||+||++.+.........++.+++|++...++..... + +..+.+|.+++.
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~~----------------------~------w~~~~~d~~~v~ 154 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHK----------------------N------WITPYSTRYYVA 154 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCccc----------------------c------cccCCCCEEEEC
Confidence 579999998654432222334557899876555531110 1 236789999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+... +..+ .++.+++++++.. |.+.. ....
T Consensus 155 s~~~~~~l~~~--gi~~---------------------~ki~v~GiPv~~~-f~~~~-------------------~~~~ 191 (391)
T PRK13608 155 TKETKQDFIDV--GIDP---------------------STVKVTGIPIDNK-FETPI-------------------DQKQ 191 (391)
T ss_pred CHHHHHHHHHc--CCCH---------------------HHEEEECeecChH-hcccc-------------------cHHH
Confidence 98877665331 2222 2788887777633 32110 0112
Q ss_pred HHhhhcCCCCCcE-EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCC
Q 001557 465 EIMHFFSNPRKPM-ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543 (1054)
Q Consensus 465 ~~~~~~~~~~~~~-Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~ 543 (1054)
.+.++..++++++ +++.|++...||+..+++++... .+...+.+++|..+. ...++. +.++..
T Consensus 192 ~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~---~~~~~~vvv~G~~~~----------l~~~l~---~~~~~~ 255 (391)
T PRK13608 192 WLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAK---SANAQVVMICGKSKE----------LKRSLT---AKFKSN 255 (391)
T ss_pred HHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhc---CCCceEEEEcCCCHH----------HHHHHH---HHhccC
Confidence 2334444556665 55789999999999999986332 222344334453321 122233 233344
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc-cCccc-----ceeeCCceEEeCC
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GGPVD-----IHRVLDNGLLVDP 617 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~-Gg~~e-----iv~~~~~Gllv~p 617 (1054)
++|.+.|+. ++++.+|+.| |++|. .+.|+++.||||||+|+|+++. +| .| ++.+.+.|+++
T Consensus 256 ~~v~~~G~~--~~~~~~~~~a----Dl~I~----k~gg~tl~EA~a~G~PvI~~~~~pg-qe~~N~~~~~~~G~g~~~-- 322 (391)
T PRK13608 256 ENVLILGYT--KHMNEWMASS----QLMIT----KPGGITISEGLARCIPMIFLNPAPG-QELENALYFEEKGFGKIA-- 322 (391)
T ss_pred CCeEEEecc--chHHHHHHhh----hEEEe----CCchHHHHHHHHhCCCEEECCCCCC-cchhHHHHHHhCCcEEEe--
Confidence 679999986 6899999999 99996 4579999999999999999964 33 23 22344455554
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcC
Q 001557 618 HDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQ 671 (1054)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~~~ 671 (1054)
.|+++++++|.++++|++.+++|++++++..+.|+++..++.+++.+..+.+.+
T Consensus 323 ~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 323 DTPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 599999999999999999999999999998888999999999999998765544
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.6e-20 Score=194.67 Aligned_cols=193 Identities=16% Similarity=0.196 Sum_probs=130.1
Q ss_pred EEEEEecCCC---C-hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCC
Q 001557 771 VFVIAADCDT---T-SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPS 846 (1054)
Q Consensus 771 Liv~DiDGTL---~-~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~ 846 (1054)
||++|+|||| . ..+++.++++|++|+++ |+.|+|+|||++..+.++++.++ +++||+||+.|++++
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~------~~~i~~nGa~i~~~~ 70 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREA----GVKVVLVTGRSLAEIKELLKQLP------LPLIAENGALIFYPG 70 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHhCC------CCEEECCCcEEEECC
Confidence 5899999999 2 46999999999999997 79999999999999999999843 469999999999754
Q ss_pred CCCCCCCCCccccCccchhhhccccChhhHHHHH---HHhhhhccCCCCccCcccccccccCcceEEEEEecCCC-CCcc
Q 001557 847 SSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTL---VRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQ-MIPP 922 (1054)
Q Consensus 847 ~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~-~~~~ 922 (1054)
. . .|.. ..+.....+ .++........ .............+++|++.... ....
T Consensus 71 ~---------~----~~~~------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 127 (204)
T TIGR01484 71 E---------I----LYIE------PSDVFEEILGIKEEIGAELKSLS----EHYVGTFIEDKAIAVAIHYVGAELGQEL 127 (204)
T ss_pred E---------E----EEEc------ccccHHHHHHhhhhcCceeeeec----cccccceeecccceeeEEEeccchhhHH
Confidence 1 1 1110 001111111 01000000000 00000001123455666654321 1112
Q ss_pred HHHHHHHHHHhc---CeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 923 VKELRKLMRIQA---LRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 923 ~~el~~~l~~~~---~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
..++...+.... ..++++++++. ++||+|++++|+.|++++++++|++++++++ +||+.| | ++||+.+|.+||
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~s~~~-~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~-~GD~~n-D-~~~~~~~~~~va 203 (204)
T TIGR01484 128 DSKMRERLEKIGRNDLELEAIYVGKT-DLEVLPAGVDKGSALQALLKELNGKRDEILA-FGDSGN-D-EEMFEVAGLAVA 203 (204)
T ss_pred HHHHHHHHHhhccccCcEEEEEecCC-EEEEecCCCChHHHHHHHHHHhCCCHHHEEE-EcCCHH-H-HHHHHHcCCceE
Confidence 234444444432 34777767775 9999999999999999999999999999988 888888 8 999999999999
Q ss_pred e
Q 001557 1000 L 1000 (1054)
Q Consensus 1000 M 1000 (1054)
|
T Consensus 204 m 204 (204)
T TIGR01484 204 V 204 (204)
T ss_pred C
Confidence 8
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.7e-20 Score=190.51 Aligned_cols=162 Identities=31% Similarity=0.520 Sum_probs=141.6
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEe
Q 001557 470 FSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAY 548 (1054)
Q Consensus 470 ~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~ 548 (1054)
....++++|+++||+++.||+..+++|+..+... ..+++.+ |+|.++. ...+..++..+++..++.|
T Consensus 10 ~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~-~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 10 KIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEK-KNPNYKLVIVGDGEY-----------KKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp TT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHH-HHTTEEEEEESHCCH-----------HHHHHHHHHHTTCGTTEEE
T ss_pred CCCCCCeEEEEEecCccccCHHHHHHHHHHHHhh-cCCCeEEEEEccccc-----------ccccccccccccccccccc
Confidence 3357789999999999999999999999998642 2345555 7785542 4567788899999899999
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHH
Q 001557 549 PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALL 628 (1054)
Q Consensus 549 ~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~ 628 (1054)
++..+.+++..+|+.| |++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|+++++.|+++++++|.
T Consensus 78 ~~~~~~~~l~~~~~~~----di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~ 153 (172)
T PF00534_consen 78 LGYVPDDELDELYKSS----DIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIE 153 (172)
T ss_dssp EESHSHHHHHHHHHHT----SEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHH
T ss_pred cccccccccccccccc----eeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHH
Confidence 9999888999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCHHHHHHHHHHHHHH
Q 001557 629 KLVSDKQLWERCRQNGLKN 647 (1054)
Q Consensus 629 ~ll~d~~~~~~~~~~~~~~ 647 (1054)
+++.+++.++.|+++++++
T Consensus 154 ~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 154 KLLNDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHhcCC
Confidence 9999999999999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-16 Score=169.03 Aligned_cols=389 Identities=19% Similarity=0.289 Sum_probs=254.9
Q ss_pred CcHhHHHHHHHHHHhcC-CCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcccc
Q 001557 191 GGQVKYVVELARALGSM-PGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 269 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~-~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~ 269 (1054)
||.++....-.+.+.+. |. +...|.|..++ + .|.+.+.... ..| +--.+++++.++.+.. +++-
T Consensus 57 GGGErVLW~Avr~~q~k~~n-~~~viYsGD~n---~-----t~~~IL~k~k-~~F-~idlDs~nI~Fi~Lk~----R~lV 121 (465)
T KOG1387|consen 57 GGGERVLWKAVRITQRKFPN-NVIVIYSGDFN---V-----TPENILNKVK-NKF-DIDLDSDNIFFIYLKL----RYLV 121 (465)
T ss_pred CCcceehhHHHHHHHHhCCC-ceEEEEeCCCC---C-----CHHHHHHHHH-Hhc-CceecccceEEEEEEe----eeee
Confidence 67777766666665544 65 45555655431 1 1111121100 000 1112456788887765 5666
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcC-CCchHHHHHHHccCCCCEEEEeCCCcc--chHHH
Q 001557 270 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHY-ADAGDAAALLSGALNVPMVFTGHSLGR--DKLEQ 346 (1054)
Q Consensus 270 k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~-~~a~~~a~~l~~~~~iP~V~t~H~l~~--~~~~~ 346 (1054)
....|++..-+-..+-..+. .+...+. +.|||..-.. .+..+.+ +++..++|++..+|-.-- +-+..
T Consensus 122 ea~~~~hfTllgQaigsmIl----~~Eai~r----~~Pdi~IDtMGY~fs~p~--~r~l~~~~V~aYvHYP~iS~DML~~ 191 (465)
T KOG1387|consen 122 EASTWKHFTLLGQAIGSMIL----AFEAIIR----FPPDIFIDTMGYPFSYPI--FRRLRRIPVVAYVHYPTISTDMLKK 191 (465)
T ss_pred ecccccceehHHHHHHHHHH----HHHHHHh----CCchheEecCCCcchhHH--HHHHccCceEEEEecccccHHHHHH
Confidence 66778775433222222222 2222211 5699887553 2222222 223458999999995322 11222
Q ss_pred HH---HhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCC
Q 001557 347 LL---KQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMP 423 (1054)
Q Consensus 347 l~---~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~ 423 (1054)
+. ..|.+.+..+. .|+++.++ -..+-.+||.|.+.|......+..+++.+
T Consensus 192 l~qrq~s~~l~~~Kla-Y~rlFa~l--Y~~~G~~ad~vm~NssWT~nHI~qiW~~~------------------------ 244 (465)
T KOG1387|consen 192 LFQRQKSGILVWGKLA-YWRLFALL--YQSAGSKADIVMTNSSWTNNHIKQIWQSN------------------------ 244 (465)
T ss_pred HHhhhhcchhhhHHHH-HHHHHHHH--HHhccccceEEEecchhhHHHHHHHhhcc------------------------
Confidence 21 12222222111 23333332 34567789999998876666665555432
Q ss_pred cEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 001557 424 RMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPL 503 (1054)
Q Consensus 424 rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~ 503 (1054)
.+.++.|..+.+........ ...+.+.+|++|.+.|.||.. +|+.+.....+
T Consensus 245 ~~~iVyPPC~~e~lks~~~t---------------------------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~ 296 (465)
T KOG1387|consen 245 TCSIVYPPCSTEDLKSKFGT---------------------------EGERENQLLSLAQFRPEKNHK-ILQLFALYLKN 296 (465)
T ss_pred ceeEEcCCCCHHHHHHHhcc---------------------------cCCcceEEEEEeecCcccccH-HHHHHHHHHhc
Confidence 56667776776644321100 024568899999999999999 55555444334
Q ss_pred cCC----CcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCC
Q 001557 504 REL----ANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIE 578 (1054)
Q Consensus 504 ~~~----~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~E 578 (1054)
.+. +++.| ++|+-... +..+.+..++.++..+++..+|.|...+|.+++..+|..| .+.|++-..|
T Consensus 297 ~pl~a~~~~iKL~ivGScRne-----eD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a----~iGvh~MwNE 367 (465)
T KOG1387|consen 297 EPLEASVSPIKLIIVGSCRNE-----EDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKA----TIGVHTMWNE 367 (465)
T ss_pred CchhhccCCceEEEEeccCCh-----hhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccc----eeehhhhhhh
Confidence 454 45665 55664432 3356789999999999999999999999999999999999 8999999999
Q ss_pred CCcHHHHHHHHcCCCEEEccccCcc-cceeeC---CceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCH
Q 001557 579 PFGLTLIEAAAYGLPIVATKNGGPV-DIHRVL---DNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSW 653 (1054)
Q Consensus 579 gfgl~l~EAmA~G~PVIat~~Gg~~-eiv~~~---~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw 653 (1054)
-||+.+.||||+|+-+|+-+.||+. |||... .+|++.. +.++.|+++.+++. +++++..++++++..+.+|+-
T Consensus 368 HFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE 445 (465)
T KOG1387|consen 368 HFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGE 445 (465)
T ss_pred hcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhH
Confidence 9999999999999999999988876 777643 3699985 78899999999998 777788999999999999999
Q ss_pred HHHHHHHHHHHHHhhhc
Q 001557 654 PEHCKSYLSRISSCKQR 670 (1054)
Q Consensus 654 ~~~a~~yl~~l~~~~~~ 670 (1054)
....+.|...+..+++.
T Consensus 446 ~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 446 LKFDKDWENPICKLLEE 462 (465)
T ss_pred HHHHHhHhHHHHHhhcc
Confidence 99999999888877653
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-18 Score=187.50 Aligned_cols=209 Identities=13% Similarity=0.014 Sum_probs=127.0
Q ss_pred EEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCCC
Q 001557 771 VFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSS 848 (1054)
Q Consensus 771 Liv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~~ 848 (1054)
+|++|+|||| ...+++.++++|++++++ |+.|++||||++..+..+++++++. +++||+||+.|+.+...
T Consensus 1 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~----G~~~vi~TgR~~~~~~~~~~~lg~~----~~~I~~NGa~I~~~~~~ 72 (225)
T TIGR02461 1 VIFTDLDGTLLPPGYEPGPAREALEELKDL----GFPIVFVSSKTRAEQEYYREELGVE----PPFIVENGGAIFIPRGY 72 (225)
T ss_pred CEEEeCCCCCcCCCCCchHHHHHHHHHHHC----CCEEEEEeCCCHHHHHHHHHHcCCC----CcEEEcCCcEEEecCcc
Confidence 5899999999 355777899999999997 9999999999999999999999983 57999999999986421
Q ss_pred CCCCCCCccccCccchhhhccccChhhHHHHHHHhhh-hccCCCC-ccC----------cccccccccCcceEEEEEecC
Q 001557 849 TEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAA-SVNDKKG-EEG----------KIVEEDESRSTIHCYAFEVTN 916 (1054)
Q Consensus 849 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~-~~~~~~~-~~~----------~~v~~~~~~~~~~kis~~~~~ 916 (1054)
........-. +..+ ..+...+..+.+++++..... ....... ... .............|+.+. .+
T Consensus 73 ~~~~~~~~~~-~~~~-~i~~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~-~~ 149 (225)
T TIGR02461 73 FPFPVGAGRE-VGNY-EVIELGKPVAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFL-WS 149 (225)
T ss_pred cccccccccc-CCCe-EEEEcCCCHHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccC-CC
Confidence 0000000000 0000 001223334444333322221 0000000 000 000000000112233222 22
Q ss_pred CCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCC--CccCEEEEeCcCCCccccccccCc
Q 001557 917 PQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGI--DLSNVVVIAGECGDTDYEGLLGGV 994 (1054)
Q Consensus 917 ~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI--~~e~vvaf~GD~~d~D~~eML~~a 994 (1054)
+ ..+.++.+.+.. ..+++..+.. ++++ +.++|||.|++.|++.+++ +.+++++ +||+.| | ++||+.+
T Consensus 150 ~---e~~~~~~~~~~~--~~~~~~~s~~--~~~i-~~~~sK~~al~~l~~~~~~~~~~~~~i~-~GD~~n-D-~~ml~~a 218 (225)
T TIGR02461 150 R---EGWEAILVTARA--RGLKYTHGGR--FYTV-HGGSDKGKAIKRLLDLYKLRPGAIESVG-LGDSEN-D-FPMFEVV 218 (225)
T ss_pred H---HHHHHHHHHHHH--cCCcEEECCE--EEEE-CCCCCHHHHHHHHHHHhccccCcccEEE-EcCCHH-H-HHHHHhC
Confidence 2 234555556633 3345555443 5675 5599999999999999987 5668888 888988 8 9999999
Q ss_pred ceEEEec
Q 001557 995 HKTVILK 1001 (1054)
Q Consensus 995 g~gVaMg 1001 (1054)
|+||++|
T Consensus 219 g~~v~v~ 225 (225)
T TIGR02461 219 DLAFLVG 225 (225)
T ss_pred CCcEecC
Confidence 9999986
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.3e-18 Score=191.82 Aligned_cols=207 Identities=12% Similarity=0.153 Sum_probs=134.0
Q ss_pred CCCEEEEEEecCCC--------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcC
Q 001557 767 RRKYVFVIAADCDT--------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL--------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~n 838 (1054)
.++.+||+|+|||| ...+++.++++|++|.+. ..++|.|||+...+.+++.-.++ +++++|
T Consensus 117 ~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-----~~VAIVSGR~~~~L~~~l~~~~l------~laGsH 185 (384)
T PLN02580 117 GKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-----FPTAIISGRSRDKVYELVGLTEL------YYAGSH 185 (384)
T ss_pred cCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-----CCEEEEeCCCHHHHHHHhCCCCc------cEEEeC
Confidence 45689999999999 256899999999999975 36999999999999999976665 699999
Q ss_pred CcEEEcCCCCCCC-CCC-CccccCc---cchh-hhccccChh--hH----HHHHHHhhhhccCCCCccCcccccccccCc
Q 001557 839 GSELYYPSSSTED-NHG-LPFLVDL---DYRF-HTEYRWGGE--GL----RKTLVRWAASVNDKKGEEGKIVEEDESRST 906 (1054)
Q Consensus 839 Ga~I~~~~~~~~~-~~~-~~~~~d~---~~~~-~i~~~w~~e--~l----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 906 (1054)
|.++..+.+.... .+. .....|. .|.. .....|... .+ .+...+.++...+.|
T Consensus 186 G~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K--------------- 250 (384)
T PLN02580 186 GMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENH--------------- 250 (384)
T ss_pred CceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEec---------------
Confidence 9999765321100 000 0000011 1110 001122211 11 112223344444333
Q ss_pred ceEEEEEecCCCCC--c-cHHHHHHHHHHhcCeEEEEEeeCCeEEEEec-CCCCHHHHHHHHHHHhCCCccC-E-EEEeC
Q 001557 907 IHCYAFEVTNPQMI--P-PVKELRKLMRIQALRCHVIYCQNGTKLHVIP-VLASRSQALRYLHVRWGIDLSN-V-VVIAG 980 (1054)
Q Consensus 907 ~~kis~~~~~~~~~--~-~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p-~~asKg~AL~~L~~~~gI~~e~-v-vaf~G 980 (1054)
.+++++|++..+.. . ..++++..+... ..+.+ .++.+++||.| .++|||.|+++|++++|++..+ + .+|+|
T Consensus 251 ~~svavHYR~a~~~~~~~~~~~l~~~l~~~-~~l~v--~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iG 327 (384)
T PLN02580 251 KFCVSVHYRNVDEKNWPLVAQCVHDVLKKY-PRLRL--THGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIG 327 (384)
T ss_pred CcEEEEEeCCCCchHHHHHHHHHHHHHHhC-CceEE--EeCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEEC
Confidence 68899999765421 1 112233333221 22443 34445999999 5999999999999999998774 3 36689
Q ss_pred cCCCccccccccC-----cceEEEecCcc
Q 001557 981 ECGDTDYEGLLGG-----VHKTVILKGVG 1004 (1054)
Q Consensus 981 D~~d~D~~eML~~-----ag~gVaMgNa~ 1004 (1054)
|+.| | ++||+. .|.||+|+|+.
T Consensus 328 DD~T-D-edmF~~L~~~~~G~~I~Vgn~~ 354 (384)
T PLN02580 328 DDRT-D-EDAFKVLREGNRGYGILVSSVP 354 (384)
T ss_pred CCch-H-HHHHHhhhccCCceEEEEecCC
Confidence 9888 8 999996 58999999876
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.5e-17 Score=171.19 Aligned_cols=119 Identities=31% Similarity=0.460 Sum_probs=97.2
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCC-CcH
Q 001557 480 ALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQ-SDV 557 (1054)
Q Consensus 480 ~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~-~dl 557 (1054)
++|++.+.||++.+++|+..+.+.. +++.+ ++|.+.+. ......+.+++...+|.+.++++. +++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~--~~~~~~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 175 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERG--PDLKLVIAGDGPER-----------EYLEELLAALLLLDRVIFLGGLDPEELL 175 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhC--CCeEEEEEeCCCCh-----------HHHHHHHHhcCCcccEEEeCCCCcHHHH
Confidence 8999999999999999999996433 45565 67777652 222333567777889999999855 455
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEe
Q 001557 558 PDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV 615 (1054)
Q Consensus 558 ~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv 615 (1054)
..+++.| |++++|+..|++|++++|||+||+|||+|+.++..|++.++.+|++|
T Consensus 176 ~~~~~~~----di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 176 ALLLAAA----DVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHhhcC----CEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 5555558 99999999999999999999999999999999999999888899875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.3e-17 Score=180.07 Aligned_cols=195 Identities=13% Similarity=0.072 Sum_probs=125.8
Q ss_pred CCEEEEEEecCCCC--------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCC
Q 001557 768 RKYVFVIAADCDTT--------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSG 839 (1054)
Q Consensus 768 ~kkLiv~DiDGTL~--------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nG 839 (1054)
++++|++|+||||. ..+++.++++|++|.+. +++.|+|+|||++.++...+.-.++ +++++||
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~---~~~~v~ivSGR~~~~~~~~~~~~~~------~l~g~hG 72 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAAR---PHNAIWIISGRKFLEKWLGVKLPGL------GLAGEHG 72 (244)
T ss_pred CcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhC---CCCeEEEEECCChhhccccCCCCce------eEEeecC
Confidence 56999999999992 34679999999999987 7788999999988776544321122 5999999
Q ss_pred cEEEcCCCCCCCCCCCccccCccchhh--hccccCh--hhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEec
Q 001557 840 SELYYPSSSTEDNHGLPFLVDLDYRFH--TEYRWGG--EGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVT 915 (1054)
Q Consensus 840 a~I~~~~~~~~~~~~~~~~~d~~~~~~--i~~~w~~--e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~ 915 (1054)
++++..+.. ..|... ....|.. ..+.++....+++..+.+ .++++|+++
T Consensus 73 ~~~~~~g~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K---------------~~s~~~hyr 125 (244)
T TIGR00685 73 CEMKDNGSC------------QDWVNLTEKIPSWKVRANELREEITTRPGVFIERK---------------GVALAWHYR 125 (244)
T ss_pred EEEecCCCc------------ceeeechhhhhhHHHHHHHHHHHHhcCCCcEEEec---------------ceEEEEEec
Confidence 999863310 011110 0012321 112222222244433332 567888886
Q ss_pred CC-CCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCc
Q 001557 916 NP-QMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV 994 (1054)
Q Consensus 916 ~~-~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~a 994 (1054)
.. +......++.+.+........+....+..++|+.|.++|||.|++.++++++++.+++++ +||+.| | ++||+.+
T Consensus 126 ~a~d~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~-iGD~~~-D-~~~~~~~ 202 (244)
T TIGR00685 126 QAPVPELARFRAKELKEKILSFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVY-LGDDIT-D-EDAFRVV 202 (244)
T ss_pred cCCCcHHHHHHHHHHHHHHhcCCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEE-EcCCCc-H-HHHHHHH
Confidence 54 211122222333322111112233344458999999999999999999999999888877 888888 8 9999988
Q ss_pred --------ceEEEec
Q 001557 995 --------HKTVILK 1001 (1054)
Q Consensus 995 --------g~gVaMg 1001 (1054)
+.+|.|+
T Consensus 203 ~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 203 NNQWGNYGFYPVPIG 217 (244)
T ss_pred hcccCCCCeEEEEEe
Confidence 5888885
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.3e-17 Score=179.76 Aligned_cols=208 Identities=12% Similarity=0.093 Sum_probs=124.6
Q ss_pred cCCCEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEE
Q 001557 766 RRRKYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSEL 842 (1054)
Q Consensus 766 ~~~kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I 842 (1054)
|..+.++++|+|||| ++.+++.++++|+++++ + +.|++||||++..+.+.+..... .+++++||+||+.|
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~----~-i~fviaTGR~~~~~~~~~~~~~~--~~~~~~I~~NGa~i 76 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKEATPEMLEFMKELRK----V-VTVGVVGGSDLSKISEQLGKTVI--NDYDYVFSENGLVA 76 (245)
T ss_pred CccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHh----C-CEEEEECCcCHHHHHHHhccccc--ccCCEEEECCceEE
Confidence 344567779999999 47799999999999994 3 99999999999988777765411 12357999999999
Q ss_pred EcCCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhc--cCCCCccCcccccccccCcceEEEEEecCC---
Q 001557 843 YYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASV--NDKKGEEGKIVEEDESRSTIHCYAFEVTNP--- 917 (1054)
Q Consensus 843 ~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~kis~~~~~~--- 917 (1054)
+..+ +.+ +...+......+.+++++....... .......... .+........+ +...+.
T Consensus 77 ~~~g---------~~i----~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~-ie~~~~i~~~~--~~~~~~~~~ 140 (245)
T PLN02423 77 HKDG---------KLI----GTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTF-IEFRSGMLNVS--PIGRNCSQE 140 (245)
T ss_pred EeCC---------EEE----EEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCe-EEccCCccccC--cccccCCHh
Confidence 8543 111 1111212223333333332211100 0000000000 11000000000 000000
Q ss_pred -----C----CCccHHHHHHHHHHhcCeEEEEEeeCC-eEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCc----CC
Q 001557 918 -----Q----MIPPVKELRKLMRIQALRCHVIYCQNG-TKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE----CG 983 (1054)
Q Consensus 918 -----~----~~~~~~el~~~l~~~~~~~~v~~s~~~-~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD----~~ 983 (1054)
. ......++.+.+......+.+..+.++ +++||+|+|+|||.||+.|+ +++++|| ||| ++
T Consensus 141 ~~~~~~~i~~i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~-----~~~e~~a-FGD~~~~~~ 214 (245)
T PLN02423 141 ERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE-----DFDEIHF-FGDKTYEGG 214 (245)
T ss_pred HHhhHHhhCccchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc-----CcCeEEE-EeccCCCCC
Confidence 0 011234555556555445667666653 59999999999999999999 8999999 777 67
Q ss_pred CccccccccC-cceEEEecCcc
Q 001557 984 DTDYEGLLGG-VHKTVILKGVG 1004 (1054)
Q Consensus 984 d~D~~eML~~-ag~gVaMgNa~ 1004 (1054)
| | ++||+. .-.++.+.+=.
T Consensus 215 N-D-~eMl~~~~~~~~~~~~~~ 234 (245)
T PLN02423 215 N-D-HEIFESERTIGHTVTSPD 234 (245)
T ss_pred C-c-HHHHhCCCcceEEeCCHH
Confidence 8 8 999996 55677776533
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.1e-16 Score=172.34 Aligned_cols=289 Identities=26% Similarity=0.300 Sum_probs=206.1
Q ss_pred ceEEEEcCCCch---HHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 307 PVAIHGHYADAG---DAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 307 pDVIh~h~~~a~---~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
+|++|.+..... ..........+.+.+...|........... . ........+.+ ... ........+.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~-~~~--~~~~~~~~~~~~~ 156 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPR--L--LLLLGLLRLLL-KRL--KKALRLLADRVIA 156 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCccccccccc--c--hhhHHHHHHHH-HHH--HHhccccccEEEE
Confidence 589998875332 235555667789999999987553211000 0 00000000000 110 1111224788888
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
.+..........+.. .++.++|++++...+.+....
T Consensus 157 ~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~-------------------- 192 (381)
T COG0438 157 VSPALKELLEALGVP------------------------NKIVVIPNGIDTEKFAPARIG-------------------- 192 (381)
T ss_pred CCHHHHHHHHHhCCC------------------------CCceEecCCcCHHHcCccccC--------------------
Confidence 887653322111111 168899999999887642100
Q ss_pred HHHhhhcCCCC--CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCchhhhhchHHHHHHHHHHHHHc
Q 001557 464 SEIMHFFSNPR--KPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSGTNAALLLSILKLIDKY 540 (1054)
Q Consensus 464 ~~~~~~~~~~~--~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~-LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~ 540 (1054)
..++ .+.++++||+.+.||+..+++++..+....+. +. +++|.++.. ...+..++..+
T Consensus 193 -------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~--~~~~~~g~~~~~----------~~~~~~~~~~~ 253 (381)
T COG0438 193 -------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD--IKLVIVGDGPER----------REELEKLAKKL 253 (381)
T ss_pred -------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC--eEEEEEcCCCcc----------HHHHHHHHHHh
Confidence 0122 47899999999999999999999999643222 44 477877653 13344477777
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCH
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 620 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~ 620 (1054)
...+.+.|+|.++.+++..+|+.| |++++|+..|+||++++|||++|+|||+++.++..+++.++.+|+++.+.+.
T Consensus 254 ~~~~~v~~~g~~~~~~~~~~~~~~----~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~ 329 (381)
T COG0438 254 GLEDNVKFLGYVPDEELAELLASA----DVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDV 329 (381)
T ss_pred CCCCcEEEecccCHHHHHHHHHhC----CEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCH
Confidence 777889999999888899999999 9999999889999999999999999999999999999988767888887789
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhhh
Q 001557 621 QSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~~~ 669 (1054)
+++++++..++++++.++.+.+.+++.+ +.|+|+..++.+.+.+..+..
T Consensus 330 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 330 EELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 9999999999999887888888777777 699999999999999887653
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.9e-17 Score=194.04 Aligned_cols=335 Identities=16% Similarity=0.186 Sum_probs=221.5
Q ss_pred CcceEEEEcCCCchHHHHHHHcc--------------CCCCEEEEeCCCccchHHHH----HH---------hCCCChhh
Q 001557 305 IWPVAIHGHYADAGDAAALLSGA--------------LNVPMVFTGHSLGRDKLEQL----LK---------QGRLSRDE 357 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~--------------~~iP~V~t~H~l~~~~~~~l----~~---------~g~~~~~~ 357 (1054)
.+|||||+|.|.++++...+.+. ....+|||.|++.++..+.+ +. .| ++...
T Consensus 160 ~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~g-l~~~~ 238 (601)
T TIGR02094 160 IDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLG-LPREQ 238 (601)
T ss_pred CCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhC-CCHHH
Confidence 47999999999988887774221 14678999999866554211 11 01 11111
Q ss_pred hhhHhHHH----HHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCc
Q 001557 358 INTTYKIM----RRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIE 433 (1054)
Q Consensus 358 i~~~~~~~----~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID 433 (1054)
+....... ..+..-+.++..|+.|.++|+.+.+-..+++..+.+.. ..+ ..++.-|-||||
T Consensus 239 ~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~----~~~-----------~~~i~gItNGId 303 (601)
T TIGR02094 239 LLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGY----EEE-----------EVPIGYVTNGVH 303 (601)
T ss_pred HHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhc----ccc-----------cCCccceeCCcc
Confidence 10000000 11333466899999999999987763333222211100 000 115788999999
Q ss_pred CCCcccCCCCCCCcccccCCCC---------------CCCCCchhH-------HHhh-----------------------
Q 001557 434 FHHIVRHNGDVDGEVERDEGSP---------------ASPDPPIWS-------EIMH----------------------- 468 (1054)
Q Consensus 434 ~~~f~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~-------~~~~----------------------- 468 (1054)
...+.|..... ...++.... .......|+ .+.+
T Consensus 304 ~~~W~~~~~~~--l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~ 381 (601)
T TIGR02094 304 NPTWVAPELRD--LYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMAT 381 (601)
T ss_pred ccccCCHHHHH--HHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhh
Confidence 99988532100 000000000 000000110 1111
Q ss_pred -hcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc--cCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCC
Q 001557 469 -FFSNPRKPMILALARPDPKKNITTLVKAFGECRPL--RELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 544 (1054)
Q Consensus 469 -~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~--~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~ 544 (1054)
...+++.++|++++|+...||+++++.++.++.+. .+...+++ ++|.+...+.+ ..++...+..+..+....+
T Consensus 382 gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~---gk~~i~~i~~la~~~~~~~ 458 (601)
T TIGR02094 382 DRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGE---GKEIIQRIVEFSKRPEFRG 458 (601)
T ss_pred ccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccch---HHHHHHHHHHHHhcccCCC
Confidence 11457889999999999999999999999888642 22234555 56766543332 2456778888888766777
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEe-cCC-CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCC-----
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFIN-PAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDP----- 617 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~-ps~-~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p----- 617 (1054)
+|.|+-..+.+--..+|+.| |++++ |+. .|++|++-+-||..|.+.+++..|...|.. ++.||+.+.+
T Consensus 459 kv~f~~~Yd~~lA~~i~aG~----Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~ 533 (601)
T TIGR02094 459 RIVFLENYDINLARYLVSGV----DVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYD 533 (601)
T ss_pred CEEEEcCCCHHHHHHHhhhh----eeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCcccc
Confidence 88887666544444566666 99999 888 999999999999999999999999999876 5689999984
Q ss_pred -------CCHHHHHHHHHHHH-----hC-----HHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 618 -------HDQQSIADALLKLV-----SD-----KQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 618 -------~d~~~la~aI~~ll-----~d-----~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
.|.++|-++|++.+ ++ |..|.++.+++++.. ..|||..++++|.+.|-
T Consensus 534 ~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 534 DEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY 599 (601)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence 89999999998766 23 667999999999987 69999999999999873
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-16 Score=172.86 Aligned_cols=251 Identities=16% Similarity=0.093 Sum_probs=153.7
Q ss_pred CEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
.|+||+|||||| ++.+.+.++++|++|+++ |+.||+||||++.++..+++++++. +++||+||+.|+.+
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~----GI~vVlaTGRt~~ev~~l~~~Lgl~----~p~I~eNGA~I~~p 72 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERR----SIPLVLYSLRTRAQLEHLCRQLRLE----HPFICEDGSAIYVP 72 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHhCCC----CeEEEeCCcEEEEc
Confidence 389999999999 356888899999999997 9999999999999999999999984 47999999999977
Q ss_pred CCCCCCCC-CCcc-ccCccchhhhccccChhhHHHHHHHhhhhcc-CCCCcc---Ccccc-------cc--cccCcceEE
Q 001557 846 SSSTEDNH-GLPF-LVDLDYRFHTEYRWGGEGLRKTLVRWAASVN-DKKGEE---GKIVE-------ED--ESRSTIHCY 910 (1054)
Q Consensus 846 ~~~~~~~~-~~~~-~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~-~~~~~~---~~~v~-------~~--~~~~~~~ki 910 (1054)
........ .... ..+..|. +........++..+..+..... ...+.+ ...+. +. ...++.|.-
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~--~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SE 150 (302)
T PRK12702 73 EHYFPAGILDEQWQHRPPYYV--CALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSE 150 (302)
T ss_pred cccccccccccccccCCCceE--EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCc
Confidence 42210000 0000 1111121 1112233444444444332211 000000 00000 00 001223333
Q ss_pred EEEecCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEec------------------C---CCCHHHHHHHHHHHhC
Q 001557 911 AFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIP------------------V---LASRSQALRYLHVRWG 969 (1054)
Q Consensus 911 s~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p------------------~---~asKg~AL~~L~~~~g 969 (1054)
.|.....+ ..+++.+.+.+.++ .++++++.++. . +++||+|++.|.+.+.
T Consensus 151 p~~w~~~~-----~~~~~~~~~~g~~~----~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~ 221 (302)
T PRK12702 151 IFSYSGDP-----ARLREAFAQQEANL----TQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQ 221 (302)
T ss_pred ceEecCCH-----HHHHHHHHHcCCeE----EecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHH
Confidence 33332211 13366677665432 24445788886 5 9999999999999987
Q ss_pred CCcc--CEEEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCccccc-ccCCCceEEeccccCHHHHHHHHH
Q 001557 970 IDLS--NVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVI-SFDSHNVIQVDEACDSYDIRASLE 1046 (1054)
Q Consensus 970 I~~e--~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~t~~~~~~gI~~al~ 1046 (1054)
-... .+++ .||+.| | ++||+.+..+|++.+.....--+.+- .++ |...+... .|..+.+.|=.+++.
T Consensus 222 ~~~~~~~tia-LGDspN-D-~~mLe~~D~~vvi~~~~~~~~~~~~~------~l~~~~~~~~~~-~a~~~GP~GW~e~v~ 291 (302)
T PRK12702 222 RHLGPIKALG-IGCSPP-D-LAFLRWSEQKVVLPSPIADSLWKEAL------RLGGPEVQPQWQ-LAQLPGPEGWNEVVL 291 (302)
T ss_pred hccCCceEEE-ecCChh-h-HHHHHhCCeeEEecCCCCCCcccccc------cccCcccCccce-ecCCCCcHHHHHHHH
Confidence 6423 5667 899999 9 99999999999998777111000000 010 33444555 668889999998887
Q ss_pred Hh
Q 001557 1047 KL 1048 (1054)
Q Consensus 1047 ~~ 1048 (1054)
++
T Consensus 292 ~~ 293 (302)
T PRK12702 292 MW 293 (302)
T ss_pred HH
Confidence 64
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-16 Score=179.52 Aligned_cols=205 Identities=12% Similarity=0.091 Sum_probs=131.2
Q ss_pred CCCEEEEEEecCCCC-------h-hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcC
Q 001557 767 RRKYVFVIAADCDTT-------S-DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL~-------~-~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~n 838 (1054)
.++.+||+|+||||. + .+++.++++|++|. + ++.|+|+|||++..+.+++.-.+ -++||+|
T Consensus 109 ~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~----~~~vaIvSGR~~~~l~~~~~l~~------l~l~g~h 177 (366)
T PLN03017 109 GKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-K----CFPTAIVTGRCIDKVYNFVKLAE------LYYAGSH 177 (366)
T ss_pred CCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-c----CCcEEEEeCCCHHHHHHhhcccC------ceEEEcC
Confidence 456899999999993 2 69999999999999 4 67899999999999998854322 2799999
Q ss_pred CcEEEcCCCCCC-C--CCC-CccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEe
Q 001557 839 GSELYYPSSSTE-D--NHG-LPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEV 914 (1054)
Q Consensus 839 Ga~I~~~~~~~~-~--~~~-~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~ 914 (1054)
|++|..++.... . +.. ..+.....|...+.. + ...+.....+.++...+.| .+++++|+
T Consensus 178 Ga~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~-v-~~~L~~~~~~~pGa~VE~K---------------~~~vavHy 240 (366)
T PLN03017 178 GMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDE-V-YRQLLEKTKSTPGAKVENH---------------KFCASVHF 240 (366)
T ss_pred CcEEecCCCcceeccccccccccccchhhHHHHHH-H-HHHHHHHHhcCCCCEEEec---------------CcEEEEEc
Confidence 999987642100 0 000 000001111111110 0 0112233334455544443 68899999
Q ss_pred cCCCCCccHHHHHHHHHHhcCe-EEEEEeeCCeEEEEecC-CCCHHHHHHHHHHHhCCCc--cCEEEEeCcCCCcccccc
Q 001557 915 TNPQMIPPVKELRKLMRIQALR-CHVIYCQNGTKLHVIPV-LASRSQALRYLHVRWGIDL--SNVVVIAGECGDTDYEGL 990 (1054)
Q Consensus 915 ~~~~~~~~~~el~~~l~~~~~~-~~v~~s~~~~~lEV~p~-~asKg~AL~~L~~~~gI~~--e~vvaf~GD~~d~D~~eM 990 (1054)
+..+. ....++...+...... ..+...++.+.+||.|. +.+||.|+++|++.+|..- ..+++|+||+-+ | ++|
T Consensus 241 R~ad~-~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~T-D-EDa 317 (366)
T PLN03017 241 RCVDE-KKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRT-D-EDA 317 (366)
T ss_pred CcCCH-HHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCc-c-HHH
Confidence 76532 1223333333321111 11334456569999995 9999999999999998763 346788999888 9 999
Q ss_pred ccCc-----ceEEEecC
Q 001557 991 LGGV-----HKTVILKG 1002 (1054)
Q Consensus 991 L~~a-----g~gVaMgN 1002 (1054)
|+.+ |.||.+|.
T Consensus 318 F~~L~~~~~G~gI~VG~ 334 (366)
T PLN03017 318 FKMLRDRGEGFGILVSK 334 (366)
T ss_pred HHHHhhcCCceEEEECC
Confidence 9965 57888874
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.1e-16 Score=183.23 Aligned_cols=271 Identities=14% Similarity=0.077 Sum_probs=172.1
Q ss_pred CcceEEEEcC-CCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHY-ADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~-~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||+|. ...++++++++..+|+|++++.+++-.. +.... . ...+.+++ ..+.+|.+++
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~--------~~~~~--~--~~~~~r~~-----~~~~ad~~~~ 147 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTG--------DRYSP--M--PEEINRQL-----TGHIADLHFA 147 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcC--------CCCCC--C--ccHHHHHH-----HHHHHHhccC
Confidence 6799999996 4667778888889999998775543110 00000 0 00011211 2335899999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCC-cCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGI-EFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGI-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
+|+...+.+.+. |.+..++.+++||+ |...+..... ..
T Consensus 148 ~s~~~~~~l~~~-----------------------G~~~~~I~vign~~~d~~~~~~~~~------------------~~ 186 (365)
T TIGR00236 148 PTEQAKDNLLRE-----------------------NVKADSIFVTGNTVIDALLTNVEIA------------------YS 186 (365)
T ss_pred CCHHHHHHHHHc-----------------------CCCcccEEEeCChHHHHHHHHHhhc------------------cc
Confidence 999887765432 22223899999997 4322211100 00
Q ss_pred hHHHhhhcCCCCCcEEEEEe-CC-CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHH
Q 001557 463 WSEIMHFFSNPRKPMILALA-RP-DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDK 539 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vg-Rl-d~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~ 539 (1054)
...+.++. .+++++++.+ |. ...||+..+++|+..+.+.. +++.+ +.+.+.. + .... +...
T Consensus 187 ~~~~~~~~--~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~--~~~~~vi~~~~~~-~--------~~~~---~~~~ 250 (365)
T TIGR00236 187 SPVLSEFG--EDKRYILLTLHRRENVGEPLENIFKAIREIVEEF--EDVQIVYPVHLNP-V--------VREP---LHKH 250 (365)
T ss_pred hhHHHhcC--CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHC--CCCEEEEECCCCh-H--------HHHH---HHHH
Confidence 01112222 2345666665 43 24589999999999985433 34443 3333211 0 1111 2333
Q ss_pred cCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEc-cccCcccceeeCCceEEeCCC
Q 001557 540 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT-KNGGPVDIHRVLDNGLLVDPH 618 (1054)
Q Consensus 540 ~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat-~~Gg~~eiv~~~~~Gllv~p~ 618 (1054)
++..++|.|.+.++..++..+|+.| |++|.+| |.+++|||+||+|||++ +.|+.++++..+ .++++ +.
T Consensus 251 ~~~~~~v~~~~~~~~~~~~~~l~~a----d~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~ 319 (365)
T TIGR00236 251 LGDSKRVHLIEPLEYLDFLNLAANS----HLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GT 319 (365)
T ss_pred hCCCCCEEEECCCChHHHHHHHHhC----CEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CC
Confidence 4555689999999989999999999 9998877 56689999999999996 678888888754 56677 57
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 001557 619 DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 660 (1054)
Q Consensus 619 d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~y 660 (1054)
|+++++++|.+++++++.+++++++...+....+++.+++..
T Consensus 320 d~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l 361 (365)
T TIGR00236 320 DKENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEEL 361 (365)
T ss_pred CHHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHH
Confidence 999999999999999988877766552222334444444433
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.2e-15 Score=167.25 Aligned_cols=243 Identities=11% Similarity=0.065 Sum_probs=161.8
Q ss_pred Ccc-eEEEEcCCCc-h--HHHHH--HHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccC
Q 001557 305 IWP-VAIHGHYADA-G--DAAAL--LSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDAS 378 (1054)
Q Consensus 305 ~~p-DVIh~h~~~a-~--~~a~~--l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~a 378 (1054)
.+| |+||.|++.. + ..... ..+..|+|+|+++|++++..... .+ ..+ ..|...++.|
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~---~~------------~~~--~~~~~~~~~a 124 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS---NY------------YLM--KEEIDMLNLA 124 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc---cc------------hhh--HHHHHHHHhC
Confidence 446 9999998633 2 11222 22334899999999987643210 00 001 2356689999
Q ss_pred CEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCC
Q 001557 379 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASP 458 (1054)
Q Consensus 379 d~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~ 458 (1054)
|.||++|+.+.+.+... |....++.++++..+.....+. .
T Consensus 125 D~iI~~S~~~~~~l~~~-----------------------g~~~~~i~~~~~~~~~~~~~~~-----------------~ 164 (333)
T PRK09814 125 DVLIVHSKKMKDRLVEE-----------------------GLTTDKIIVQGIFDYLNDIELV-----------------K 164 (333)
T ss_pred CEEEECCHHHHHHHHHc-----------------------CCCcCceEeccccccccccccc-----------------c
Confidence 99999999887765331 1111266666654433111100 0
Q ss_pred CCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHH
Q 001557 459 DPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLI 537 (1054)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~ 537 (1054)
.....+.|+|+|++...+++.. . . +++.+ |+|+++...
T Consensus 165 ------------~~~~~~~i~yaG~l~k~~~l~~-------~---~--~~~~l~i~G~g~~~~----------------- 203 (333)
T PRK09814 165 ------------TPSFQKKINFAGNLEKSPFLKN-------W---S--QGIKLTVFGPNPEDL----------------- 203 (333)
T ss_pred ------------cccCCceEEEecChhhchHHHh-------c---C--CCCeEEEECCCcccc-----------------
Confidence 0134568999999995432211 1 2 23443 778886411
Q ss_pred HHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC-----------CCCCcHHHHHHHHcCCCEEEccccCcccce
Q 001557 538 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF-----------IEPFGLTLIEAAAYGLPIVATKNGGPVDIH 606 (1054)
Q Consensus 538 ~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~-----------~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv 606 (1054)
...++|.|.|+++.++++.+|+.. +.+++.. .-.+|.++.||||||+|||+++.|+..++|
T Consensus 204 ---~~~~~V~f~G~~~~eel~~~l~~~-----~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V 275 (333)
T PRK09814 204 ---ENSANISYKGWFDPEELPNELSKG-----FGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFI 275 (333)
T ss_pred ---ccCCCeEEecCCCHHHHHHHHhcC-----cCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHH
Confidence 234689999999999999999873 4444321 235788899999999999999999999999
Q ss_pred eeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHH
Q 001557 607 RVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHC 657 (1054)
Q Consensus 607 ~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a 657 (1054)
+++.+|++++ +.++++++|..+ +++++++|++++++..+.+.--...
T Consensus 276 ~~~~~G~~v~--~~~el~~~l~~~--~~~~~~~m~~n~~~~~~~~~~g~~~ 322 (333)
T PRK09814 276 VENGLGFVVD--SLEELPEIIDNI--TEEEYQEMVENVKKISKLLRNGYFT 322 (333)
T ss_pred HhCCceEEeC--CHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhcchhH
Confidence 9999999998 788999999985 3567888999999887544433333
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.2e-15 Score=174.09 Aligned_cols=265 Identities=13% Similarity=0.028 Sum_probs=160.9
Q ss_pred CcceEEEEcCCC-chHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYAD-AGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~~-a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||++... .....+..++..++|+++..|...... .....++ ..+.+|.|++
T Consensus 84 ~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~~~-----------------~~~~~~~------~~~~~d~i~~ 140 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVWAW-----------------RQGRAFK------IAKATDHVLA 140 (380)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchhhc-----------------CchHHHH------HHHHHhhhee
Confidence 679999998642 222222334556999998766431100 0001111 2567899999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
+++...+.+.. +. + ++.+++|.+....... +...
T Consensus 141 ~~~~~~~~~~~-~g-----------------~--------~~~~~G~p~~~~~~~~--------------------~~~~ 174 (380)
T PRK00025 141 LFPFEAAFYDK-LG-----------------V--------PVTFVGHPLADAIPLL--------------------PDRA 174 (380)
T ss_pred CCccCHHHHHh-cC-----------------C--------CeEEECcCHHHhcccc--------------------cChH
Confidence 99865544311 11 1 4556665543221100 0011
Q ss_pred HHHhhhcCCCCCcEEEEE-e-CCCCC-CCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHH
Q 001557 464 SEIMHFFSNPRKPMILAL-A-RPDPK-KNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDK 539 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~v-g-Rld~~-Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~ 539 (1054)
..+.++..+++.++|+.+ | |.... ++++.+++|+..+.+. .+++.+ ++|+.+. ....+.+++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~--~~~~~~ii~~~~~~----------~~~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQR--YPDLRFVLPLVNPK----------RREQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEecCChh----------hHHHHHHHHhh
Confidence 122334445566765443 4 34343 4578999999988543 345554 4443221 12345555565
Q ss_pred c-CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEc-----------------cccC
Q 001557 540 Y-DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT-----------------KNGG 601 (1054)
Q Consensus 540 ~-~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat-----------------~~Gg 601 (1054)
+ ++. +.+. ..++..+|+.| |++|.+| |.+.+|||+||+|+|+. +.++
T Consensus 243 ~~~~~--v~~~----~~~~~~~~~~a----Dl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~ 307 (380)
T PRK00025 243 YAGLE--VTLL----DGQKREAMAAA----DAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVS 307 (380)
T ss_pred cCCCC--eEEE----cccHHHHHHhC----CEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeee
Confidence 5 443 4442 25899999999 9999987 88888999999999987 5667
Q ss_pred cccceeeCC--ceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001557 602 PVDIHRVLD--NGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 602 ~~eiv~~~~--~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
.++++.++. .+++.+..|+++++++|.++++|++.++++++++.+..+.. -..-+++..+.+.+
T Consensus 308 l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~ 373 (380)
T PRK00025 308 LPNLLAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQQL-RCGADERAAQAVLE 373 (380)
T ss_pred hHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHH
Confidence 778776543 45777888999999999999999999999999876555332 12234444444443
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.1e-15 Score=174.39 Aligned_cols=250 Identities=16% Similarity=0.107 Sum_probs=163.7
Q ss_pred CcceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||+|.. ...+++...++..++|++++.|+..... .+. . +...++ ...+.+|.+++
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~------~~~-----~---~~~~r~-----~~~~~ad~~~~ 147 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD------RGM-----P---DEENRH-----AIDKLSDLHFA 147 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC------CCC-----C---chHHHH-----HHHHHhhhccC
Confidence 46999999964 4556677778888999998777542110 000 0 001111 13567899999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCC-cCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGI-EFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGI-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
+|+...+.+.+. |.+..++.+++|++ |...+.+..... .
T Consensus 148 ~s~~~~~~l~~~-----------------------G~~~~kI~vign~v~d~~~~~~~~~~~----------------~- 187 (363)
T cd03786 148 PTEEARRNLLQE-----------------------GEPPERIFVVGNTMIDALLRLLELAKK----------------E- 187 (363)
T ss_pred CCHHHHHHHHHc-----------------------CCCcccEEEECchHHHHHHHHHHhhcc----------------c-
Confidence 999876654321 22234899999985 543332211000 0
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHH
Q 001557 463 WSEIMHFFSNPRKPMILALARPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDK 539 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~---~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~ 539 (1054)
..+..+..+++..++++.||+.. .||++.+++|+..+.. . ++.+++++.+. ....+.+.+.+
T Consensus 188 -~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~--~--~~~vi~~~~~~----------~~~~l~~~~~~ 252 (363)
T cd03786 188 -LILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAELAE--E--DVPVVFPNHPR----------TRPRIREAGLE 252 (363)
T ss_pred -hhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHHHHHh--c--CCEEEEECCCC----------hHHHHHHHHHh
Confidence 00112233344456778898875 7999999999998842 1 45554433221 12445666666
Q ss_pred cCC-CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc-cCcccceeeCCceEEeCC
Q 001557 540 YDL-YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRVLDNGLLVDP 617 (1054)
Q Consensus 540 ~~l-~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~-Gg~~eiv~~~~~Gllv~p 617 (1054)
+++ .++|.|.++...++++.+|..| |++|.+|. | +..|||++|+|+|+++. +..++.++ +|+.+.+
T Consensus 253 ~~~~~~~v~~~~~~~~~~~~~l~~~a----d~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~---~g~~~~~ 320 (363)
T cd03786 253 FLGHHPNVLLISPLGYLYFLLLLKNA----DLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVE---SGTNVLV 320 (363)
T ss_pred hccCCCCEEEECCcCHHHHHHHHHcC----cEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhh---eeeEEec
Confidence 665 5689999988888999999999 99999984 4 47899999999999975 44566654 3443333
Q ss_pred -CCHHHHHHHHHHHHhCHHHHHHH
Q 001557 618 -HDQQSIADALLKLVSDKQLWERC 640 (1054)
Q Consensus 618 -~d~~~la~aI~~ll~d~~~~~~~ 640 (1054)
.|+++++++|.++++++..+..+
T Consensus 321 ~~~~~~i~~~i~~ll~~~~~~~~~ 344 (363)
T cd03786 321 GTDPEAILAAIEKLLSDEFAYSLM 344 (363)
T ss_pred CCCHHHHHHHHHHHhcCchhhhcC
Confidence 37999999999999988766554
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.4e-13 Score=147.82 Aligned_cols=381 Identities=16% Similarity=0.134 Sum_probs=240.1
Q ss_pred HHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcccccccCCC
Q 001557 196 YVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWP 275 (1054)
Q Consensus 196 ~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~ 275 (1054)
.+..-|..|++. | ++|+++.-..+.| . +++...+.++|+.+|..|.-.+.++
T Consensus 28 RMqYHA~Sla~~-g-f~VdliGy~~s~p---------~------------e~l~~hprI~ih~m~~l~~~~~~p~----- 79 (444)
T KOG2941|consen 28 RMQYHALSLAKL-G-FQVDLIGYVESIP---------L------------EELLNHPRIRIHGMPNLPFLQGGPR----- 79 (444)
T ss_pred HHHHHHHHHHHc-C-CeEEEEEecCCCC---------h------------HHHhcCCceEEEeCCCCcccCCCch-----
Confidence 344467888999 8 9999997442211 1 3344568999999987654222221
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCC---chHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCC
Q 001557 276 HIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD---AGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGR 352 (1054)
Q Consensus 276 ~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~---a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~ 352 (1054)
+....-.++..+..+..+|-. . ..||+|..+.++ .-.++.+.+...|.++++..|++++.. .--+..|.
T Consensus 80 -~~~l~lKvf~Qfl~Ll~aL~~---~---~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl-~l~~~~g~ 151 (444)
T KOG2941|consen 80 -VLFLPLKVFWQFLSLLWALFV---L---RPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSL-QLKLKLGF 151 (444)
T ss_pred -hhhhHHHHHHHHHHHHHHHHh---c---cCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHH-HHHhhcCC
Confidence 111222222222222222222 1 458999998863 455666777888999999999998762 11122232
Q ss_pred CChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCC
Q 001557 353 LSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGI 432 (1054)
Q Consensus 353 ~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGI 432 (1054)
. +...++.++. |+..-+.|+.-+|+|+.+.+++...+... +-..+|.++.. .+.
T Consensus 152 ~-----h~lV~l~~~~--E~~fgk~a~~nLcVT~AMr~dL~qnWgi~-------------ra~v~YDrPps------~~~ 205 (444)
T KOG2941|consen 152 Q-----HPLVRLVRWL--EKYFGKLADYNLCVTKAMREDLIQNWGIN-------------RAKVLYDRPPS------KPT 205 (444)
T ss_pred C-----CchHHHHHHH--HHHhhcccccchhhHHHHHHHHHHhcCCc-------------eeEEEecCCCC------CCC
Confidence 1 1233444553 77788999999999999988876665421 11233344332 111
Q ss_pred cCCC----cccCCCCCCCcccccCCCCCCCCCchhHHHhh------hcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhc--
Q 001557 433 EFHH----IVRHNGDVDGEVERDEGSPASPDPPIWSEIMH------FFSNPRKPMILALARPDPKKNITTLVKAFGEC-- 500 (1054)
Q Consensus 433 D~~~----f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l-- 500 (1054)
+.+. |-+...+-.....+.. . .+.-..-+...+ +.......++++--...+..++..|++|+...
T Consensus 206 ~l~~~H~lf~~l~~d~~~f~ar~~-q--~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~ 282 (444)
T KOG2941|consen 206 PLDEQHELFMKLAGDHSPFRAREP-Q--DKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEE 282 (444)
T ss_pred chhHHHHHHhhhccccchhhhccc-c--cchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhh
Confidence 1111 2221110000000000 0 000000011111 11123344566667788999999999999833
Q ss_pred ---ccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC
Q 001557 501 ---RPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF 576 (1054)
Q Consensus 501 ---~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~ 576 (1054)
.+-...|++.. |-|.|+. .+.+.+.+.++++...-....++..+|.+.++..|+ .+|++.+|.
T Consensus 283 ~~~~~~~~lP~llciITGKGPl-----------kE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saD--lGVcLHtSS 349 (444)
T KOG2941|consen 283 QLYDKTHNLPSLLCIITGKGPL-----------KEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASAD--LGVCLHTSS 349 (444)
T ss_pred hhhhccCCCCcEEEEEcCCCch-----------hHHHHHHHHHhcccceeeeecccccccchhHhhccc--cceEeeecC
Confidence 23345577765 5577775 445667888999987777788999999999999993 356667764
Q ss_pred -CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHhcC
Q 001557 577 -IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS----DKQLWERCRQNGLKNIHQF 651 (1054)
Q Consensus 577 -~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~----d~~~~~~~~~~~~~~v~~f 651 (1054)
.=-.|+++.....||+||+|-+.....|+|+++.||++|+ |.+++++.|.-+++ +.++..++.++.++. +..
T Consensus 350 SGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~-~e~ 426 (444)
T KOG2941|consen 350 SGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE-QEL 426 (444)
T ss_pred cccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH-Hhh
Confidence 3457899999999999999999999999999999999998 99999999999999 888888888888887 445
Q ss_pred CHHHHH
Q 001557 652 SWPEHC 657 (1054)
Q Consensus 652 sw~~~a 657 (1054)
.|+..-
T Consensus 427 RW~~~W 432 (444)
T KOG2941|consen 427 RWDESW 432 (444)
T ss_pred hHHHHH
Confidence 555433
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-15 Score=170.67 Aligned_cols=204 Identities=11% Similarity=0.113 Sum_probs=130.5
Q ss_pred CCCEEEEEEecCCCC--------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcC
Q 001557 767 RRKYVFVIAADCDTT--------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL~--------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~n 838 (1054)
.++.+||+|+||||. ..+++.++++|++|.+ +..|+|+|||++..+.+++.-.++ +++++|
T Consensus 96 ~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~-----~~~vaIvSGR~~~~l~~~~~~~~l------~laGsH 164 (354)
T PLN02151 96 GKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK-----CFPTAIVSGRCREKVSSFVKLTEL------YYAGSH 164 (354)
T ss_pred CCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc-----CCCEEEEECCCHHHHHHHcCCccc------eEEEeC
Confidence 456899999999992 4689999999999995 457999999999999999865455 699999
Q ss_pred CcEEEcCCCCC-CC-CCC-CccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEec
Q 001557 839 GSELYYPSSST-ED-NHG-LPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVT 915 (1054)
Q Consensus 839 Ga~I~~~~~~~-~~-~~~-~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~ 915 (1054)
|+++..++... .. ... .....+..|...+.. -...+.+...+.++...+.| .+++++|++
T Consensus 165 G~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~--v~~~l~~~~~~~pG~~VE~K---------------~~slavHYR 227 (354)
T PLN02151 165 GMDIKGPEQGSKYKKENQSLLCQPATEFLPVINE--VYKKLVEKTKSIPGAKVENN---------------KFCASVHFR 227 (354)
T ss_pred CceeecCCCCccccccccccccccchhhHHHHHH--HHHHHHHHHhcCCCCEEEec---------------CcEEEEEeC
Confidence 99998653110 00 000 000111122111110 00012222234455444433 688999997
Q ss_pred CCCCCccHHHHHHHHHHhcCeE-EEEEeeCCeEEEEecC-CCCHHHHHHHHHHHhCCCc--cCEEEEeCcCCCccccccc
Q 001557 916 NPQMIPPVKELRKLMRIQALRC-HVIYCQNGTKLHVIPV-LASRSQALRYLHVRWGIDL--SNVVVIAGECGDTDYEGLL 991 (1054)
Q Consensus 916 ~~~~~~~~~el~~~l~~~~~~~-~v~~s~~~~~lEV~p~-~asKg~AL~~L~~~~gI~~--e~vvaf~GD~~d~D~~eML 991 (1054)
..+.. ...++...+....... .+...++.+.+||.|. +++||.|+++|++.++..- ..+++|+||+-+ | ++||
T Consensus 228 ~a~~~-~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~T-D-EDaF 304 (354)
T PLN02151 228 CVEEN-KWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRT-D-EDAF 304 (354)
T ss_pred CCChH-HHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCc-H-HHHH
Confidence 65421 1233434433211111 1334456569999995 9999999999999988653 246788999888 9 9999
Q ss_pred cCc-----ceEEEec
Q 001557 992 GGV-----HKTVILK 1001 (1054)
Q Consensus 992 ~~a-----g~gVaMg 1001 (1054)
+.+ |.||.++
T Consensus 305 ~~L~~~~~G~gI~Vg 319 (354)
T PLN02151 305 KILRDKKQGLGILVS 319 (354)
T ss_pred HHHhhcCCCccEEec
Confidence 854 5667776
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.7e-15 Score=160.25 Aligned_cols=196 Identities=19% Similarity=0.161 Sum_probs=136.5
Q ss_pred ccCCCEEEEEEecCCCC--------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEE
Q 001557 765 LRRRKYVFVIAADCDTT--------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 836 (1054)
Q Consensus 765 ~~~~kkLiv~DiDGTL~--------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~ 836 (1054)
...++++|++|+||||+ ..+++.++++|+.|.++ +.+.++|+|||+..++..++.-.++ ++||
T Consensus 14 ~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~---~~~~v~iiSGR~~~~l~~~~~v~~i------~l~a 84 (266)
T COG1877 14 LNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASD---PRNVVAIISGRSLAELERLFGVPGI------GLIA 84 (266)
T ss_pred ccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhc---CCCeEEEEeCCCHHHHHHhcCCCCc------cEEE
Confidence 35678999999999992 55889999999999998 6778999999999999999985555 6999
Q ss_pred cCCcEEEcCCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecC
Q 001557 837 NSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTN 916 (1054)
Q Consensus 837 ~nGa~I~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~ 916 (1054)
+||+++..+.+..... .....+..|...+ .+.++.++.++|++..+.| .+.++||+++
T Consensus 85 ehGa~~r~~~g~~~~~--~~~~~~~~~~~~v-----~~~l~~~v~r~pGs~iE~K---------------~~a~~~Hyr~ 142 (266)
T COG1877 85 EHGAEVRDPNGKWWIN--LAEEADLRWLKEV-----AAILEYYVERTPGSYIERK---------------GFAVALHYRN 142 (266)
T ss_pred ecceEEecCCCCeeEe--cCHHHHhhHHHHH-----HHHHHHHhhcCCCeEEEEc---------------CcEEEEeecc
Confidence 9999997554211000 0011111222222 2356777788888877665 5778888876
Q ss_pred CCCCcc-HHHHHHHHHHhcCe-EEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCc
Q 001557 917 PQMIPP-VKELRKLMRIQALR-CHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV 994 (1054)
Q Consensus 917 ~~~~~~-~~el~~~l~~~~~~-~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~a 994 (1054)
.+.... ...+.......... +++ ..+...+|+.|.++|||.|+++++++.+.+- .+++|.||+-+ | ++||+.+
T Consensus 143 a~~~~~~~~a~~~~~~~~~~~~~~v--~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~-~~~~~aGDD~T-D-E~~F~~v 217 (266)
T COG1877 143 AEDDEGAALALAEAATLINELKLRV--TPGKMVVELRPPGVSKGAAIKYIMDELPFDG-RFPIFAGDDLT-D-EDAFAAV 217 (266)
T ss_pred CCchhhHHHHHHHHHhccccccEEE--EeCceEEEEeeCCcchHHHHHHHHhcCCCCC-CcceecCCCCc-c-HHHHHhh
Confidence 553221 11222222222112 333 3333489999999999999999999887664 56667899888 9 9999988
Q ss_pred ce
Q 001557 995 HK 996 (1054)
Q Consensus 995 g~ 996 (1054)
..
T Consensus 218 ~~ 219 (266)
T COG1877 218 NK 219 (266)
T ss_pred cc
Confidence 63
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.5e-15 Score=163.16 Aligned_cols=204 Identities=16% Similarity=0.177 Sum_probs=110.0
Q ss_pred EEEecCCC--------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEc
Q 001557 773 VIAADCDT--------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYY 844 (1054)
Q Consensus 773 v~DiDGTL--------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~ 844 (1054)
|+|+|||| ...+++.++++|++|.+. +++.|+|+|||+...+..+..-.++ .++++||+++..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~---~~~~v~IvSGR~~~~~~~~~~~~~i------~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAAD---PNNTVAIVSGRSLDDLERFGGIPNI------GLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHH---SE--EEEE-SS-HHHHHHH-S-SS-------EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhcc---CCCEEEEEEeCCHHHhHHhcCCCCc------eEEEEeeEEecc
Confidence 68999999 256889999999999998 7788999999999996555543334 699999999998
Q ss_pred CCCCCCCCCCCccccCccchh---hhccccChh---hHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCC
Q 001557 845 PSSSTEDNHGLPFLVDLDYRF---HTEYRWGGE---GLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQ 918 (1054)
Q Consensus 845 ~~~~~~~~~~~~~~~d~~~~~---~i~~~w~~e---~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~ 918 (1054)
++.. .|.. .....|... .++.+..+++++..+.| .++++||++...
T Consensus 72 ~~~~-------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K---------------~~sv~~Hyr~~~ 123 (235)
T PF02358_consen 72 PGGS-------------EWTNLPADEDLEWKDEVREILEYFAERTPGSFIEDK---------------EFSVAFHYRNAP 123 (235)
T ss_dssp TTE--------------EEE-TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEE---------------TTEEEEE-TTS-
T ss_pred Cccc-------------cccccccccchHHHHHHHHHHHHHHhhccCcEEEEC---------------CeEEEEEecCCC
Confidence 7521 1110 111223322 23334445566555443 678899987655
Q ss_pred CC---ccHHHHHHHHHHh---cCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCC--ccCEEEEeCcCCCcccccc
Q 001557 919 MI---PPVKELRKLMRIQ---ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGID--LSNVVVIAGECGDTDYEGL 990 (1054)
Q Consensus 919 ~~---~~~~el~~~l~~~---~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~--~e~vvaf~GD~~d~D~~eM 990 (1054)
.. ..+.++.+.+... ...++++. +...+||.|.+.+||.|+++|++.++.. ..++++|+||+-+ | ++|
T Consensus 124 ~~~~~~~~~~l~~~l~~~~~~~~~~~v~~--g~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~t-D-E~~ 199 (235)
T PF02358_consen 124 PEFGEAQARELAEQLREILASHPGLEVVP--GKKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRT-D-EDA 199 (235)
T ss_dssp ST----THHHHHHHHHHHHHHH-T-EEEE---SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHH-H-HHH
T ss_pred cchhhhHHHHHHHHHHHHHHhCCCEEEEE--CCCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCC-C-HHH
Confidence 33 1345555555442 12344433 3348999999999999999999998764 1235555888777 8 999
Q ss_pred ccCc------ceEEEecCcchhHHhhhhccCCCcc
Q 001557 991 LGGV------HKTVILKGVGESARKLHANRNYSLE 1019 (1054)
Q Consensus 991 L~~a------g~gVaMgNa~~~~~~~~~~~~~~~~ 1019 (1054)
|+.+ |.+|.++... ...++++.+|-+.
T Consensus 200 f~~~~~~~~~~~~i~V~~~~--~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 200 FRALRELEEGGFGIKVGSVS--VGEKPTAASYRLD 232 (235)
T ss_dssp HHTTTTS----EEEEES------------------
T ss_pred HHHHHhcccCCCCeEEEeec--ccccccccccccc
Confidence 9874 4577887544 1334455555443
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.58 E-value=1e-13 Score=161.37 Aligned_cols=325 Identities=19% Similarity=0.235 Sum_probs=182.0
Q ss_pred cceEEEEcCCCchHHHHHHHc-cCCCCEEEEeCCCccchHHHHHHhC---------CCChhhhhhHhHHHHHHHHHHhhh
Q 001557 306 WPVAIHGHYADAGDAAALLSG-ALNVPMVFTGHSLGRDKLEQLLKQG---------RLSRDEINTTYKIMRRIEAEELSL 375 (1054)
Q Consensus 306 ~pDVIh~h~~~a~~~a~~l~~-~~~iP~V~t~H~l~~~~~~~l~~~g---------~~~~~~i~~~~~~~~ri~~E~~~l 375 (1054)
..-|.|+|-|++|....++.+ ...|.+|||.|..-.. +.+..| .+........+.+..+...|+.+.
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lG---R~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA 219 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLG---RYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAA 219 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHH---HHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHH
T ss_pred CcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchh---hHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHH
Confidence 456889999998887766653 4578899999975322 122211 112233344556777888899999
Q ss_pred ccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCC
Q 001557 376 DASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSP 455 (1054)
Q Consensus 376 ~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~ 455 (1054)
..||++.++|+-.+.+-..+.+.. .=.|+|||++.+.|.... ++++..
T Consensus 220 ~~AdvFTTVSeITa~Ea~~LL~r~------------------------pDvV~pNGl~v~~~~~~~--------efqnl~ 267 (633)
T PF05693_consen 220 HYADVFTTVSEITAKEAEHLLKRK------------------------PDVVTPNGLNVDKFPALH--------EFQNLH 267 (633)
T ss_dssp HHSSEEEESSHHHHHHHHHHHSS--------------------------SEE----B-GGGTSSTT--------HHHHHH
T ss_pred HhcCeeeehhhhHHHHHHHHhCCC------------------------CCEEcCCCccccccccch--------HHHHHH
Confidence 999999999998777755544331 236889999998776321 000000
Q ss_pred CCCCCchhHHHhhhc-C----CCC-CcEEEEEeCCCC-CCCHHHHHHHHHhcccc----cCCCcEE-EEEecC----CCc
Q 001557 456 ASPDPPIWSEIMHFF-S----NPR-KPMILALARPDP-KKNITTLVKAFGECRPL----RELANLT-LIMGNR----DDI 519 (1054)
Q Consensus 456 ~~~~~~~~~~~~~~~-~----~~~-~~~Il~vgRld~-~Kgi~~ll~A~~~l~~~----~~~~~l~-LIiG~~----~~~ 519 (1054)
......+.+..+..+ . +++ ..+|+..||... .||++.+|+|+.+|... .....++ +|+-.. -..
T Consensus 268 ~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~v 347 (633)
T PF05693_consen 268 AKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNV 347 (633)
T ss_dssp HHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-H
T ss_pred HHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCH
Confidence 011223333333322 1 123 345777899994 79999999999998531 1122233 333100 011
Q ss_pred hhhh---------hchHHH--------------------------------------------------------HHHHH
Q 001557 520 DEMS---------GTNAAL--------------------------------------------------------LLSIL 534 (1054)
Q Consensus 520 ~~~~---------~~~~~~--------------------------------------------------------~~~i~ 534 (1054)
+.++ ....++ -..|.
T Consensus 348 e~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpIL 427 (633)
T PF05693_consen 348 ESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPIL 427 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHH
Confidence 1111 111100 01122
Q ss_pred HHHHHcCCCC----C--EEe-CCCCCCC------cHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccC
Q 001557 535 KLIDKYDLYG----Q--VAY-PKHHKQS------DVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG 601 (1054)
Q Consensus 535 ~l~~~~~l~~----~--V~~-~g~~~~~------dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg 601 (1054)
..+.++++.+ + |.| +-+++.. +..++++.| |+.|+||++||+|.|.+|+.|+|+|.|+|+..|
T Consensus 428 n~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~Gc----dLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsG 503 (633)
T PF05693_consen 428 NMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGC----DLGVFPSYYEPWGYTPLECTAFGVPSITTNLSG 503 (633)
T ss_dssp HHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHS----SEEEE--SSBSS-HHHHHHHHTT--EEEETTBH
T ss_pred HHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccC----ceeeeccccccccCChHHHhhcCCceeeccchh
Confidence 2233333321 1 222 2223222 578999999 999999999999999999999999999999877
Q ss_pred cccceee-----CCceEEe-C--CCCHH----HHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 001557 602 PVDIHRV-----LDNGLLV-D--PHDQQ----SIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCK 668 (1054)
Q Consensus 602 ~~eiv~~-----~~~Gllv-~--p~d~~----~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~ 668 (1054)
+-..+.. ...|+.| + -.+.+ ++++.|.+... ++.++..+++++.+.....+|......|.+.+.-.+
T Consensus 504 FG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL 583 (633)
T PF05693_consen 504 FGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLAL 583 (633)
T ss_dssp HHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 7544432 3457755 2 23444 45555555555 566677778888777789999999999999988555
Q ss_pred h
Q 001557 669 Q 669 (1054)
Q Consensus 669 ~ 669 (1054)
.
T Consensus 584 ~ 584 (633)
T PF05693_consen 584 R 584 (633)
T ss_dssp H
T ss_pred H
Confidence 4
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-13 Score=169.42 Aligned_cols=330 Identities=18% Similarity=0.223 Sum_probs=220.0
Q ss_pred CcceEEEEcCCCchHHHH-----HHHcc----------CCCCEEEEeCCCccchHHH----HH--------H-hCCCChh
Q 001557 305 IWPVAIHGHYADAGDAAA-----LLSGA----------LNVPMVFTGHSLGRDKLEQ----LL--------K-QGRLSRD 356 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~-----~l~~~----------~~iP~V~t~H~l~~~~~~~----l~--------~-~g~~~~~ 356 (1054)
..|||||+|.+.+++++. ++... ....+|||.|++.+...+. ++ . .| ++..
T Consensus 247 ~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lg-l~~~ 325 (778)
T cd04299 247 IKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELG-LSRD 325 (778)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcC-CCHH
Confidence 469999999999988887 44321 1467899999986654221 11 0 11 1111
Q ss_pred hhhhHhHHH-----HHHHHHHhhhccCCEEEecCHHH---HHHHHhh-hcCCChHHHHHHHHhHhcccccCCCCCCcEEE
Q 001557 357 EINTTYKIM-----RRIEAEELSLDASEIVITSTRQE---IEEQWRL-YDGFDPVLERKLRARIKRGVSCHGRFMPRMVV 427 (1054)
Q Consensus 357 ~i~~~~~~~-----~ri~~E~~~l~~ad~Vi~~S~~~---~~~~~~~-y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~v 427 (1054)
.+....... ..+..-+.++..|+.|.++|+-. .++++.. ++++.. ...++.-
T Consensus 326 ~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~-------------------~~~~i~~ 386 (778)
T cd04299 326 RFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPV-------------------EEVPIGH 386 (778)
T ss_pred HHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCc-------------------ccCceec
Confidence 110000000 01233456899999999999866 3333322 332211 1126889
Q ss_pred eCCCCcCCCcc-cCCCCCCCcccccC---------------CCCCCCCCchhH-------HHhhh---------------
Q 001557 428 IPPGIEFHHIV-RHNGDVDGEVERDE---------------GSPASPDPPIWS-------EIMHF--------------- 469 (1054)
Q Consensus 428 IPnGID~~~f~-~~~~~~~~~~~~~~---------------~~~~~~~~~~~~-------~~~~~--------------- 469 (1054)
|-|||+...+. |.... .+.++. ....-.+...|+ .+.++
T Consensus 387 ITNGVh~~~W~~P~~~~---l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~ 463 (778)
T cd04299 387 VTNGVHVPTWVAPEMRE---LYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGAS 463 (778)
T ss_pred eeCCcchhhhcCHHHHH---HHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCc
Confidence 99999999887 42100 110000 000001111121 11111
Q ss_pred ---------cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc--CCCcEEE-EEecCCCchhhhhchHHHHHHHHHHH
Q 001557 470 ---------FSNPRKPMILALARPDPKKNITTLVKAFGECRPLR--ELANLTL-IMGNRDDIDEMSGTNAALLLSILKLI 537 (1054)
Q Consensus 470 ---------~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~--~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~ 537 (1054)
..+|+.++|+++.|+...|+.++++..+.++.++- +...+++ ++|.....++. ..++...|..+.
T Consensus 464 ~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~---gK~iIk~i~~~a 540 (778)
T cd04299 464 AEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEP---GKELIQEIVEFS 540 (778)
T ss_pred hhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchH---HHHHHHHHHHHH
Confidence 14577789999999999999999999988885422 2234555 55665433332 356778888888
Q ss_pred HHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEe
Q 001557 538 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV 615 (1054)
Q Consensus 538 ~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv 615 (1054)
+.....++|.|+-..+-+--..+++.| ||+++||+ .|++|++-+-||..|.+-+++..|...|-. ++.||+.+
T Consensus 541 ~~p~~~~kVvfle~Yd~~lA~~LvaG~----DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwai 615 (778)
T cd04299 541 RRPEFRGRIVFLEDYDMALARHLVQGV----DVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAI 615 (778)
T ss_pred hCcCCCCcEEEEcCCCHHHHHHHHhhh----hhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEe
Confidence 877777888887776554445667777 99999999 999999999999999999999999999987 78999999
Q ss_pred CC------------CCHHHHHHHHHHHHh----C------HHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 616 DP------------HDQQSIADALLKLVS----D------KQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 616 ~p------------~d~~~la~aI~~ll~----d------~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
.+ .|.++|-+.|++.+. + |..|.++.++++..+ -.|||..++++|.+.+.
T Consensus 616 g~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 616 GDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred CCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 87 566777777765443 3 778999999999998 69999999999998876
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.7e-13 Score=159.39 Aligned_cols=166 Identities=13% Similarity=0.182 Sum_probs=139.9
Q ss_pred EEEEEe--CCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCC----------
Q 001557 477 MILALA--RPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY---------- 543 (1054)
Q Consensus 477 ~Il~vg--Rld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~---------- 543 (1054)
.+++++ |+ +.|.++.+|+|+..+.. ..|++.| +.|-+.+ . +....++++++++++.
T Consensus 321 ~~I~v~idrL-~ek~~~~~I~av~~~~~--~~p~~~L~~~gy~~~-~-------~~~~~l~~~i~~~~~~~~~~~~~~~~ 389 (519)
T TIGR03713 321 TEIGFWIDGL-SDEELQQILQQLLQYIL--KNPDYELKILTYNND-N-------DITQLLEDILEQINEEYNQDKNFFSL 389 (519)
T ss_pred eEEEEEcCCC-ChHHHHHHHHHHHHHHh--hCCCeEEEEEEecCc-h-------hHHHHHHHHHHHHHhhhchhhhcccc
Confidence 466666 99 99999999999999964 4455555 3565542 1 1234555555665554
Q ss_pred -------------------CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc
Q 001557 544 -------------------GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD 604 (1054)
Q Consensus 544 -------------------~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e 604 (1054)
..|.|.|.++..++...|..| .++|.+|..|+|+ +++||+++|+|+| +-|+.+
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~a----rl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~ 461 (519)
T TIGR03713 390 SEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKL----RLIIDLSKEPDLY-TQISGISAGIPQI---NKVETD 461 (519)
T ss_pred chhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhh----eEEEECCCCCChH-HHHHHHHcCCCee---ecCCce
Confidence 689999998777999999999 9999999999999 9999999999999 667799
Q ss_pred ceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 001557 605 IHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSR 663 (1054)
Q Consensus 605 iv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~ 663 (1054)
+|.++.||++| +|..+|++||..+|.+++.|+++...+.+.++.||-+.+++++.+.
T Consensus 462 ~V~d~~NG~li--~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 462 YVEHNKNGYII--DDISELLKALDYYLDNLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred eeEcCCCcEEe--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 99999999999 4999999999999999999999999999999999999999887664
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.37 E-value=7e-13 Score=130.65 Aligned_cols=131 Identities=31% Similarity=0.448 Sum_probs=93.1
Q ss_pred CcEEEEEeCCCCCCCHHHHHH-HHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001557 475 KPMILALARPDPKKNITTLVK-AFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH 552 (1054)
Q Consensus 475 ~~~Il~vgRld~~Kgi~~ll~-A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 552 (1054)
.++|+++|++.+.|+++.+++ |+.++.+.. +++.| |+|++++ . +.++ ..++|.|+|++
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~--p~~~l~i~G~~~~--~-----------l~~~-----~~~~v~~~g~~ 61 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKH--PDIELIIIGNGPD--E-----------LKRL-----RRPNVRFHGFV 61 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHS--TTEEEEEECESS---H-----------HCCH-----HHCTEEEE-S-
T ss_pred cccccccccccccccccchhhhHHHHHHHHC--cCEEEEEEeCCHH--H-----------HHHh-----cCCCEEEcCCH
Confidence 467999999999999999999 999996544 55665 7788654 1 1122 23589999998
Q ss_pred CCCcHHHHHHHhhcCCcEEEecCC-CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHH
Q 001557 553 KQSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLV 631 (1054)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~-~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1054)
+++.++|+.| |++|+|+. .++++.+++|||++|+|||+++. +..+++.....|+++ ++|+++++++|.+++
T Consensus 62 --~e~~~~l~~~----dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 62 --EELPEILAAA----DVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp --HHHHHHHHC-----SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred --HHHHHHHHhC----CEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 5899999999 99999985 78999999999999999999999 566777656778888 889999999999998
Q ss_pred hC
Q 001557 632 SD 633 (1054)
Q Consensus 632 ~d 633 (1054)
+|
T Consensus 134 ~d 135 (135)
T PF13692_consen 134 ND 135 (135)
T ss_dssp H-
T ss_pred cC
Confidence 75
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.37 E-value=8.2e-11 Score=137.23 Aligned_cols=251 Identities=14% Similarity=-0.006 Sum_probs=148.6
Q ss_pred CcceEEEEcCCCc-hHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYADA-GDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~~a-~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+|+++.... ....+..++.+|+|+|+.+. ..-+.+ .+. .. +...+.+|.|++
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P~~waw-----~~~--------~~---------r~l~~~~d~v~~ 144 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-PQVWAW-----RKW--------RA---------KKIEKATDFLLA 144 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-CcHhhc-----Ccc--------hH---------HHHHHHHhHhhc
Confidence 6799999988522 33344466778999997653 110000 000 01 123567999999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
+++.+.+.+. .+.. ++.++.|++-..... . .+...
T Consensus 145 ~~~~e~~~~~-~~g~-------------------------~~~~vGnPv~~~~~~-~------------------~~~~~ 179 (385)
T TIGR00215 145 ILPFEKAFYQ-KKNV-------------------------PCRFVGHPLLDAIPL-Y------------------KPDRK 179 (385)
T ss_pred cCCCcHHHHH-hcCC-------------------------CEEEECCchhhhccc-c------------------CCCHH
Confidence 9987655432 1111 566677776221110 0 00111
Q ss_pred HHHhhhcCCCCCcEEEEE--eCCCC-CCCHHHHHHHHHhcccccCCCcEEE-E-EecCCCchhhhhchHHHHHHHHHHHH
Q 001557 464 SEIMHFFSNPRKPMILAL--ARPDP-KKNITTLVKAFGECRPLRELANLTL-I-MGNRDDIDEMSGTNAALLLSILKLID 538 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~v--gRld~-~Kgi~~ll~A~~~l~~~~~~~~l~L-I-iG~~~~~~~~~~~~~~~~~~i~~l~~ 538 (1054)
..+.++..++++++|+.+ +|..+ .|++..+++|+..+.+.. +++.+ + +++... ...+.++..
T Consensus 180 ~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~--p~~~~vi~~~~~~~-----------~~~~~~~~~ 246 (385)
T TIGR00215 180 SAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQE--PDLRRVLPVVNFKR-----------RLQFEQIKA 246 (385)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhC--CCeEEEEEeCCchh-----------HHHHHHHHH
Confidence 223345555677887766 37776 789999999999886433 45543 3 333322 123344445
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc-ccC----------------
Q 001557 539 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-NGG---------------- 601 (1054)
Q Consensus 539 ~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~-~Gg---------------- 601 (1054)
.+++...|.+... +...+|++| |++|.+| |.+.+|+|++|+|+|... ...
T Consensus 247 ~~~~~~~v~~~~~----~~~~~l~aA----Dl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~ 313 (385)
T TIGR00215 247 EYGPDLQLHLIDG----DARKAMFAA----DAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYIS 313 (385)
T ss_pred HhCCCCcEEEECc----hHHHHHHhC----CEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeee
Confidence 5554445655432 677899999 9999999 777779999999988872 111
Q ss_pred cccceeeCCce-EEe-CCCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHHh
Q 001557 602 PVDIHRVLDNG-LLV-DPHDQQSIADALLKLVSDK----QLWERCRQNGLKNIH 649 (1054)
Q Consensus 602 ~~eiv~~~~~G-llv-~p~d~~~la~aI~~ll~d~----~~~~~~~~~~~~~v~ 649 (1054)
.+.++.+..-. .++ +--+++.|++++.+++.|+ +.++++.+...+..+
T Consensus 314 ~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 367 (385)
T TIGR00215 314 LPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQ 367 (385)
T ss_pred ccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHH
Confidence 11112111111 111 2346889999999999999 877777766655543
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.2e-10 Score=118.28 Aligned_cols=250 Identities=14% Similarity=0.112 Sum_probs=148.5
Q ss_pred CEEEEEEecCCC-C-hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCC
Q 001557 769 KYVFVIAADCDT-T-SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPS 846 (1054)
Q Consensus 769 kkLiv~DiDGTL-~-~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~ 846 (1054)
.++||+|+|||| . .--.+.....+..|++. |+.||+||.-+..++..+-+.++++ +-.+|++||+.||-+.
T Consensus 7 ~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~----G~~Vi~~SSKT~aE~~~l~~~l~v~---~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 7 PLLIFTDLDGTLLPHSYEWQPAAPVLLELKDA----GVPVILCSSKTRAEMLYLQKSLGVQ---GLPLIAENGAAIYLPK 79 (274)
T ss_pred ceEEEEcccCcccCCCCCCCccchHHHHHHHc----CCeEEEeccchHHHHHHHHHhcCCC---CCceeecCCceEEecc
Confidence 389999999999 2 22334445667777776 9999999999999999999999996 2469999999999775
Q ss_pred CCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccC---CCCccCccccc--c-c------ccCcceEEEEEe
Q 001557 847 SSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVND---KKGEEGKIVEE--D-E------SRSTIHCYAFEV 914 (1054)
Q Consensus 847 ~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~---~~~~~~~~v~~--~-~------~~~~~~kis~~~ 914 (1054)
++.......... .+ ..|++-.-.-+.+++.+.++.....- .+.+. ..+.+ . . ...+.+..+.+-
T Consensus 80 ~~~~~~~~~r~~--~g-~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~-~ei~e~TGlpre~aaLa~~rEyseti~~ 155 (274)
T COG3769 80 GWFPFDGKPREI--SG-ISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDD-EEIAEWTGLPREQAALAMLREYSETIIW 155 (274)
T ss_pred cccccCCCCcee--cc-eEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCH-HHHHHHhCCChHHhHHHHHHHhhhheee
Confidence 432110000000 00 11122222223344333333221110 00000 00000 0 0 000112222222
Q ss_pred cCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHh-CCCccCEEEEeCcCCCccccccccC
Q 001557 915 TNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRW-GIDLSNVVVIAGECGDTDYEGLLGG 993 (1054)
Q Consensus 915 ~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~-gI~~e~vvaf~GD~~d~D~~eML~~ 993 (1054)
.+.+ .....+...|...+ +.+.++..+.-|+...+.||+|+..|.+-+ -.+...+.+..||+.| | .+||+.
T Consensus 156 rs~d--~~~~~~~~~L~e~g----lt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~n-D-~Pl~ev 227 (274)
T COG3769 156 RSSD--ERMAQFTARLNERG----LTFVHGARFWHVLDASAGKGQAANWLLETYRRLGGARTTLGLGDGPN-D-APLLEV 227 (274)
T ss_pred cccc--hHHHHHHHHHHhcC----ceEEeccceEEEeccccCccHHHHHHHHHHHhcCceeEEEecCCCCC-c-ccHHHh
Confidence 2222 23345666666654 356666668899999999999999987764 4455554555999999 9 999999
Q ss_pred cceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhc
Q 001557 994 VHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 994 ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 1049 (1054)
..+.++++|-...-..++... |-+...++.-..+|..++|+||.
T Consensus 228 ~d~AfiV~~lnre~~~lv~~i------------~~vv~~~~~~~~~~~~e~~~~~~ 271 (274)
T COG3769 228 MDYAFIVKGLNREGVHLVSSI------------PAVVERIQREGPEGWREGLDHFF 271 (274)
T ss_pred hhhheeecccchhhhhccccc------------hhheeeccccCchHHHHHhhhhc
Confidence 999999997761111122111 23334556777899999999974
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.8e-11 Score=121.55 Aligned_cols=160 Identities=29% Similarity=0.387 Sum_probs=87.2
Q ss_pred CcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCccccc
Q 001557 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQK 270 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k 270 (1054)
||.++++.+|+++|++. | |+|+|+++..... ... ....++.+.++|+.+.....
T Consensus 1 GG~~~~~~~l~~~L~~~-G-~~V~v~~~~~~~~-------~~~---------------~~~~~~~~~~~~~~~~~~~~-- 54 (160)
T PF13579_consen 1 GGIERYVRELARALAAR-G-HEVTVVTPQPDPE-------DDE---------------EEEDGVRVHRLPLPRRPWPL-- 54 (160)
T ss_dssp SHHHHHHHHHHHHHHHT-T--EEEEEEE---GG-------G-S---------------EEETTEEEEEE--S-SSSGG--
T ss_pred CCHHHHHHHHHHHHHHC-C-CEEEEEecCCCCc-------ccc---------------cccCCceEEeccCCccchhh--
Confidence 79999999999999999 8 9999999753211 000 11258999999976552100
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHh
Q 001557 271 ELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQ 350 (1054)
Q Consensus 271 ~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~ 350 (1054)
..+ .+...+ .+.+ .....+||+||+|++.++.++.++++..++|+|++.|+........
T Consensus 55 -~~~----~~~~~~-------~~~l-----~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~---- 113 (160)
T PF13579_consen 55 -RLL----RFLRRL-------RRLL-----AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRGSR---- 113 (160)
T ss_dssp -GHC----CHHHHH-------HHHC-----HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------
T ss_pred -hhH----HHHHHH-------HHHH-----hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhccc----
Confidence 011 111111 1111 0012569999999976666676666577999999999854322100
Q ss_pred CCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCC
Q 001557 351 GRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPP 430 (1054)
Q Consensus 351 g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPn 430 (1054)
....+.++ .|+..++.||.|+++|+...+.+.. +. ..+ +++.||||
T Consensus 114 ---------~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~l~~-~g-~~~---------------------~ri~vipn 159 (160)
T PF13579_consen 114 ---------WKRRLYRW--LERRLLRRADRVIVVSEAMRRYLRR-YG-VPP---------------------DRIHVIPN 159 (160)
T ss_dssp ---------HHHHHHHH--HHHHHHHH-SEEEESSHHHHHHHHH-H----G---------------------GGEEE---
T ss_pred ---------hhhHHHHH--HHHHHHhcCCEEEECCHHHHHHHHH-hC-CCC---------------------CcEEEeCc
Confidence 11122233 2677899999999999998887766 43 222 39999999
Q ss_pred C
Q 001557 431 G 431 (1054)
Q Consensus 431 G 431 (1054)
|
T Consensus 160 G 160 (160)
T PF13579_consen 160 G 160 (160)
T ss_dssp -
T ss_pred C
Confidence 8
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.5e-11 Score=110.64 Aligned_cols=91 Identities=18% Similarity=0.359 Sum_probs=86.0
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-
Q 001557 570 VFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI- 648 (1054)
Q Consensus 570 v~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v- 648 (1054)
++|+|+..++++..++|+||||+|||++..++..+++.++.+++.++ |++++.++|..+++||++++++++++++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~ 78 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARERVL 78 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999888999998 999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHH
Q 001557 649 HQFSWPEHCKSYLS 662 (1054)
Q Consensus 649 ~~fsw~~~a~~yl~ 662 (1054)
++|+|++.++++++
T Consensus 79 ~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 79 KRHTWEHRAEQILE 92 (92)
T ss_pred HhCCHHHHHHHHHC
Confidence 69999999999874
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.23 E-value=9.9e-09 Score=118.24 Aligned_cols=329 Identities=10% Similarity=0.108 Sum_probs=184.4
Q ss_pred CCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCccc
Q 001557 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYV 268 (1054)
Q Consensus 189 ~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l 268 (1054)
-|||+..-...+++.|.+. | |+|.++++.. +...+.+ ...|+.++.++..+.
T Consensus 10 GTGGHi~Pala~a~~l~~~-g-~~v~~vg~~~---------~~e~~l~-------------~~~g~~~~~~~~~~l---- 61 (352)
T PRK12446 10 GSAGHVTPNLAIIPYLKED-N-WDISYIGSHQ---------GIEKTII-------------EKENIPYYSISSGKL---- 61 (352)
T ss_pred CcHHHHHHHHHHHHHHHhC-C-CEEEEEECCC---------ccccccC-------------cccCCcEEEEeccCc----
Confidence 3799999999999999998 8 9999998642 1111111 123566666664332
Q ss_pred ccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHH
Q 001557 269 QKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLL 348 (1054)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~ 348 (1054)
.+...+..+ .+.-.++....+..+.+.+ .+||+||++...++..+.+.++.+++|+++.-.+.....
T Consensus 62 ~~~~~~~~~-~~~~~~~~~~~~~~~i~~~-------~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~g~----- 128 (352)
T PRK12446 62 RRYFDLKNI-KDPFLVMKGVMDAYVRIRK-------LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPGL----- 128 (352)
T ss_pred CCCchHHHH-HHHHHHHHHHHHHHHHHHh-------cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCccH-----
Confidence 111111111 1222222333333333333 789999998766666677888889999987665542211
Q ss_pred HhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEe
Q 001557 349 KQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVI 428 (1054)
Q Consensus 349 ~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vI 428 (1054)
..+ ...+.++.|+++-+.... .++ + .++.+.
T Consensus 129 ----------------~nr-----~~~~~a~~v~~~f~~~~~----~~~---~---------------------~k~~~t 159 (352)
T PRK12446 129 ----------------ANK-----IALRFASKIFVTFEEAAK----HLP---K---------------------EKVIYT 159 (352)
T ss_pred ----------------HHH-----HHHHhhCEEEEEccchhh----hCC---C---------------------CCeEEE
Confidence 111 246678888776532211 111 1 166777
Q ss_pred CCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHH-HHHHHhcccccCCC
Q 001557 429 PPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTL-VKAFGECRPLRELA 507 (1054)
Q Consensus 429 PnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~l-l~A~~~l~~~~~~~ 507 (1054)
.|.|..+..... .......+...+++|+||.+|.---.+.+..+ .+++..+. ...
T Consensus 160 G~Pvr~~~~~~~---------------------~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~ 215 (352)
T PRK12446 160 GSPVREEVLKGN---------------------REKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL---LKY 215 (352)
T ss_pred CCcCCccccccc---------------------chHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCc
Confidence 666654332110 01112233345678888887764444555433 33444442 224
Q ss_pred cEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHH
Q 001557 508 NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEA 587 (1054)
Q Consensus 508 ~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EA 587 (1054)
+++++.|..+ .+. .. ..+ ..+...+++ .++++++|+.| |++|.- +-+.|+.|+
T Consensus 216 ~vv~~~G~~~-~~~-----------~~---~~~---~~~~~~~f~-~~~m~~~~~~a----dlvIsr----~G~~t~~E~ 268 (352)
T PRK12446 216 QIVHLCGKGN-LDD-----------SL---QNK---EGYRQFEYV-HGELPDILAIT----DFVISR----AGSNAIFEF 268 (352)
T ss_pred EEEEEeCCch-HHH-----------HH---hhc---CCcEEecch-hhhHHHHHHhC----CEEEEC----CChhHHHHH
Confidence 4544556542 211 11 111 122333442 25799999999 988854 457899999
Q ss_pred HHcCCCEEEcccc-Cc---cc-----ceeeCCceEEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHH
Q 001557 588 AAYGLPIVATKNG-GP---VD-----IHRVLDNGLLVDPH--DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEH 656 (1054)
Q Consensus 588 mA~G~PVIat~~G-g~---~e-----iv~~~~~Gllv~p~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~ 656 (1054)
+++|+|+|.-... .+ .+ .+...+.|..+... +++.++++|.+++.|++.+++ ..+.+....-
T Consensus 269 ~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~~-------~~~~~~~~~a 341 (352)
T PRK12446 269 LTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYKT-------ALKKYNGKEA 341 (352)
T ss_pred HHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHHH-------HHHHcCCCCH
Confidence 9999999988642 11 11 22333456666432 578999999999988765432 2233444455
Q ss_pred HHHHHHHHH
Q 001557 657 CKSYLSRIS 665 (1054)
Q Consensus 657 a~~yl~~l~ 665 (1054)
++++.+.+.
T Consensus 342 a~~i~~~i~ 350 (352)
T PRK12446 342 IQTIIDHIS 350 (352)
T ss_pred HHHHHHHHH
Confidence 555555543
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.2e-08 Score=116.72 Aligned_cols=330 Identities=17% Similarity=0.133 Sum_probs=197.2
Q ss_pred CCCcHhHHHHHHHHHHhcCCCceE-EEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcc
Q 001557 189 DTGGQVKYVVELARALGSMPGVYR-VDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKY 267 (1054)
Q Consensus 189 ~tGG~~~~v~eLa~aLa~~~Gv~~-V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~ 267 (1054)
-|||+..-...|+++|.++ | ++ |.++.... +.. .......++.+..++.++..++
T Consensus 9 GTGGHv~pAlAl~~~l~~~-g-~~~v~~~~~~~---------~~e-------------~~l~~~~~~~~~~I~~~~~~~~ 64 (357)
T COG0707 9 GTGGHVFPALALAEELAKR-G-WEQVIVLGTGD---------GLE-------------AFLVKQYGIEFELIPSGGLRRK 64 (357)
T ss_pred CCccchhHHHHHHHHHHhh-C-ccEEEEecccc---------cce-------------eeeccccCceEEEEeccccccc
Confidence 3699999999999999999 8 74 55552210 000 0111223788888888654322
Q ss_pred cccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHH
Q 001557 268 VQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQL 347 (1054)
Q Consensus 268 l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l 347 (1054)
..+..+.. .-..+.-+.+..+.|.+ .+||+|.+........+.+.+..+++|+++.-.+.......
T Consensus 65 ----~~~~~~~~-~~~~~~~~~~a~~il~~-------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~an-- 130 (357)
T COG0707 65 ----GSLKLLKA-PFKLLKGVLQARKILKK-------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGLAN-- 130 (357)
T ss_pred ----CcHHHHHH-HHHHHHHHHHHHHHHHH-------cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcchhH--
Confidence 22221111 12233344444455554 78999999877666677777888899999998887544321
Q ss_pred HHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEE
Q 001557 348 LKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVV 427 (1054)
Q Consensus 348 ~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~v 427 (1054)
++ ..+.|+.|.+.-+. .. .+ + ...++.+
T Consensus 131 ---------------k~---------~~~~a~~V~~~f~~-~~----~~--~---------------------~~~~~~~ 158 (357)
T COG0707 131 ---------------KI---------LSKFAKKVASAFPK-LE----AG--V---------------------KPENVVV 158 (357)
T ss_pred ---------------HH---------hHHhhceeeecccc-cc----cc--C---------------------CCCceEE
Confidence 11 24567777665432 11 11 0 1115667
Q ss_pred eCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Q 001557 428 IPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA 507 (1054)
Q Consensus 428 IPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~ 507 (1054)
..+.|..+.+. .... ..++....++++|+.+|.---.+.+..++....... .+..
T Consensus 159 tG~Pvr~~~~~-~~~~----------------------~~~~~~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l--~~~~ 213 (357)
T COG0707 159 TGIPVRPEFEE-LPAA----------------------EVRKDGRLDKKTILVTGGSQGAKALNDLVPEALAKL--ANRI 213 (357)
T ss_pred ecCcccHHhhc-cchh----------------------hhhhhccCCCcEEEEECCcchhHHHHHHHHHHHHHh--hhCe
Confidence 77766655443 1100 011111237888888876433333444443332221 1122
Q ss_pred cEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHH
Q 001557 508 NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEA 587 (1054)
Q Consensus 508 ~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EA 587 (1054)
++..+.|... +.++.....+++. +...++ .++++.+|++| |++|.= +-++|+.|.
T Consensus 214 ~v~~~~G~~~------------~~~~~~~~~~~~~---~~v~~f--~~dm~~~~~~A----DLvIsR----aGa~Ti~E~ 268 (357)
T COG0707 214 QVIHQTGKND------------LEELKSAYNELGV---VRVLPF--IDDMAALLAAA----DLVISR----AGALTIAEL 268 (357)
T ss_pred EEEEEcCcch------------HHHHHHHHhhcCc---EEEeeH--HhhHHHHHHhc----cEEEeC----CcccHHHHH
Confidence 3323344432 2344445555544 666666 46899999999 998854 447999999
Q ss_pred HHcCCCEEEccccCcc--------cceeeCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHH
Q 001557 588 AAYGLPIVATKNGGPV--------DIHRVLDNGLLVDPHD--QQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHC 657 (1054)
Q Consensus 588 mA~G~PVIat~~Gg~~--------eiv~~~~~Gllv~p~d--~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a 657 (1054)
.++|+|+|--..+... ..+++...|++++..+ ++.+.+.|.+++++|+..++|.+++++....-.-..++
T Consensus 269 ~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~i~ 348 (357)
T COG0707 269 LALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAERIA 348 (357)
T ss_pred HHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 9999999987754431 1233445677777555 88999999999999999999998888775443433333
Q ss_pred H
Q 001557 658 K 658 (1054)
Q Consensus 658 ~ 658 (1054)
+
T Consensus 349 ~ 349 (357)
T COG0707 349 D 349 (357)
T ss_pred H
Confidence 3
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.2e-10 Score=117.01 Aligned_cols=169 Identities=21% Similarity=0.265 Sum_probs=85.2
Q ss_pred CCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcc
Q 001557 188 SDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKY 267 (1054)
Q Consensus 188 ~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~ 267 (1054)
+..||.++++.+|+++|+++ | |+|++++.....+... .........+....
T Consensus 9 ~~~GG~e~~~~~l~~~l~~~-G-~~v~v~~~~~~~~~~~------------------------~~~~~~~~~~~~~~--- 59 (177)
T PF13439_consen 9 PNIGGAERVVLNLARALAKR-G-HEVTVVSPGVKDPIEE------------------------ELVKIFVKIPYPIR--- 59 (177)
T ss_dssp TSSSHHHHHHHHHHHHHHHT-T--EEEEEESS-TTS-SS------------------------TEEEE---TT-SST---
T ss_pred CCCChHHHHHHHHHHHHHHC-C-CEEEEEEcCCCccchh------------------------hccceeeeeecccc---
Confidence 56799999999999999999 8 9999998753221110 00111111111100
Q ss_pred cccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHH
Q 001557 268 VQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQL 347 (1054)
Q Consensus 268 l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l 347 (1054)
...... ......+.+.+.+ .+|||||+|.+.....+..... ++|+|+|.|+..... .
T Consensus 60 ------~~~~~~-----~~~~~~~~~~i~~-------~~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~---~ 116 (177)
T PF13439_consen 60 ------KRFLRS-----FFFMRRLRRLIKK-------EKPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFER---R 116 (177)
T ss_dssp ------SS--HH-----HHHHHHHHHHHHH-------HT-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--H---H
T ss_pred ------cccchh-----HHHHHHHHHHHHH-------cCCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccc---c
Confidence 001111 1112223333333 3599999998644333332222 999999999875320 0
Q ss_pred HHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEE
Q 001557 348 LKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVV 427 (1054)
Q Consensus 348 ~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~v 427 (1054)
........ ...+..+ .+...++.+|.++|+|+...+++.+ |+. . ..++.|
T Consensus 117 ~~~~~~~~-----~~~~~~~--~~~~~~~~~~~ii~vS~~~~~~l~~-~~~-~---------------------~~ki~v 166 (177)
T PF13439_consen 117 FLKSKLSP-----YSYLNFR--IERKLYKKADRIIAVSESTKDELIK-FGI-P---------------------PEKIHV 166 (177)
T ss_dssp TTTTSCCC-----HHHHHHC--TTHHHHCCSSEEEESSHHHHHHHHH-HT------------------------SS-EEE
T ss_pred ccccccch-----hhhhhhh--hhhhHHhcCCEEEEECHHHHHHHHH-hCC-c---------------------ccCCEE
Confidence 00000000 0111111 1334588999999999998888766 542 1 138999
Q ss_pred eCCCCcCCCcc
Q 001557 428 IPPGIEFHHIV 438 (1054)
Q Consensus 428 IPnGID~~~f~ 438 (1054)
||||||.+.|.
T Consensus 167 I~ngid~~~F~ 177 (177)
T PF13439_consen 167 IYNGIDTDRFR 177 (177)
T ss_dssp ----B-CCCH-
T ss_pred EECCccHHHcC
Confidence 99999999873
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.5e-11 Score=130.45 Aligned_cols=214 Identities=19% Similarity=0.143 Sum_probs=111.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccc-----
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNT----- 241 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~----- 241 (1054)
||++||.... |+ ..+||...++..|+++|+++ | ++|.|+++.+...........+...+.....
T Consensus 1 kIl~vt~E~~----P~-----~k~GGLgdv~~~L~kaL~~~-G-~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~ 69 (245)
T PF08323_consen 1 KILMVTSEYA----PF-----AKVGGLGDVVGSLPKALAKQ-G-HDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPV 69 (245)
T ss_dssp EEEEE-S-BT----TT-----B-SSHHHHHHHHHHHHHHHT-T--EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEE
T ss_pred CEEEEEcccC----cc-----cccCcHhHHHHHHHHHHHhc-C-CeEEEEEccchhhhhhhhcceEEEEecccccccccc
Confidence 7999998654 22 58999999999999999999 8 9999999865321100000000000000000
Q ss_pred ---cccccccCCCCCeEEEEccCCCCCcccccccCCCC-hHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCc
Q 001557 242 ---ENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPH-IPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA 317 (1054)
Q Consensus 242 ---~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~-l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a 317 (1054)
..+.-.....+|+.++.+... .|..+..++.. ...+.+.+.++.. ++++..+.+... ..+|||||+|+|.+
T Consensus 70 ~~~~~~~v~~~~~~~v~v~~i~~~---~~f~r~~iY~~~~~~~~d~~~rf~~-fs~a~le~~~~l-~~~pDIIH~hDW~t 144 (245)
T PF08323_consen 70 GVWYEVRVYRYPVDGVPVYFIDNP---EYFDRPGIYGDNGGDYPDNAERFAF-FSRAALELLKKL-GWKPDIIHCHDWHT 144 (245)
T ss_dssp E----EEEEEEEETTEEEEEEESH---HHHGSSSSSBSTSSBHTTHHHHHHH-HHHHHHHHHCTC-T-S-SEEEEECGGG
T ss_pred ccceEEEEEEEEcCCccEEEecCh---hhccccceeccCCCcchhHHHHHHH-HHHHHHHHHHhh-CCCCCEEEecCchH
Confidence 000000011257777776643 23333333321 0123344444442 345555544442 24699999999999
Q ss_pred hHHHHHHHccC-------CCCEEEEeCCCccchHHHH--HHhCCCChhhh--hhHhHHHHHHHHHHhhhccCCEEEecCH
Q 001557 318 GDAAALLSGAL-------NVPMVFTGHSLGRDKLEQL--LKQGRLSRDEI--NTTYKIMRRIEAEELSLDASEIVITSTR 386 (1054)
Q Consensus 318 ~~~a~~l~~~~-------~iP~V~t~H~l~~~~~~~l--~~~g~~~~~~i--~~~~~~~~ri~~E~~~l~~ad~Vi~~S~ 386 (1054)
++++.++.... ++|+|+|+|++..+..... +..-.++.... ...+.....+...+..+..||.|+|+|+
T Consensus 145 al~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~ 224 (245)
T PF08323_consen 145 ALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIVYADKVTTVSP 224 (245)
T ss_dssp TTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHHHSSEEEESSH
T ss_pred HHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHHhcCEeeeCCH
Confidence 99999988765 6999999999755432110 00000010000 0000000112223457999999999999
Q ss_pred HHHHHHHhhh
Q 001557 387 QEIEEQWRLY 396 (1054)
Q Consensus 387 ~~~~~~~~~y 396 (1054)
.+++++...+
T Consensus 225 ~Ya~Ei~~~~ 234 (245)
T PF08323_consen 225 TYAREIQTPE 234 (245)
T ss_dssp HHHHHTTSHH
T ss_pred HHHHHHhCcc
Confidence 9999876654
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.3e-08 Score=117.37 Aligned_cols=192 Identities=14% Similarity=0.236 Sum_probs=139.3
Q ss_pred ccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCC
Q 001557 376 DASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSP 455 (1054)
Q Consensus 376 ~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~ 455 (1054)
...|.||++|+++.+.+..+++.. .++.+||-|+=+. +. ..
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~~-----------------------~~~~~ip~g~i~~-~~-~~-------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDNE-----------------------YQEQISQLGYLYP-FK-KD-------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCcc-----------------------cCceEEEEEEEEe-ec-cc--------------
Confidence 678999999987777666555421 1677888887522 11 00
Q ss_pred CCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHH
Q 001557 456 ASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILK 535 (1054)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~ 535 (1054)
+...+-++.++. ...|++++.+. ...|++.|-+|-+.+. -..+.+
T Consensus 279 ----------------~r~~~~~l~~t~-------s~~I~~i~~Lv--~~lPd~~f~Iga~te~----------s~kL~~ 323 (438)
T TIGR02919 279 ----------------NKYRKQALILTN-------SDQIEHLEEIV--QALPDYHFHIAALTEM----------SSKLMS 323 (438)
T ss_pred ----------------cCCcccEEEECC-------HHHHHHHHHHH--HhCCCcEEEEEecCcc----------cHHHHH
Confidence 122334666661 88999999885 4557777744666531 245556
Q ss_pred HHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc-cCcccceeeCCceEE
Q 001557 536 LIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRVLDNGLL 614 (1054)
Q Consensus 536 l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~-Gg~~eiv~~~~~Gll 614 (1054)
+ .++ .+.+.|++.. ..++.++|..| |++|.++..|+|++++.||+.+|+|||+.+. -|+.+++.+ |.+
T Consensus 324 L-~~y--~nvvly~~~~-~~~l~~ly~~~----dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l 392 (438)
T TIGR02919 324 L-DKY--DNVKLYPNIT-TQKIQELYQTC----DIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENI 392 (438)
T ss_pred H-Hhc--CCcEEECCcC-hHHHHHHHHhc----cEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Cce
Confidence 6 666 4566666664 45799999999 9999999999999999999999999999985 355677654 899
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCC
Q 001557 615 VDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFS 652 (1054)
Q Consensus 615 v~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fs 652 (1054)
+++.++++|+++|.++|++++.+++.-..-++.+..-+
T Consensus 393 ~~~~~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a~~~~ 430 (438)
T TIGR02919 393 FEHNEVDQLISKLKDLLNDPNQFRELLEQQREHANDIS 430 (438)
T ss_pred ecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999887766555555543333
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.3e-07 Score=108.67 Aligned_cols=150 Identities=17% Similarity=0.274 Sum_probs=95.9
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE--EEecCCCchhhhhchHHHHHHHHHHHHHcCCCC--------------CEEeC
Q 001557 486 PKKNITTLVKAFGECRPLRELANLTL--IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG--------------QVAYP 549 (1054)
Q Consensus 486 ~~Kgi~~ll~A~~~l~~~~~~~~l~L--IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~--------------~V~~~ 549 (1054)
..++++.+++++..+.+. +++.+ .+.+..+ ...+.+.+...++.. .+.+.
T Consensus 219 ~~~~lp~~l~al~~L~~~---~~~~~v~~~~~~~~-----------~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~ 284 (396)
T TIGR03492 219 AYRNLKLLLRALEALPDS---QPFVFLAAIVPSLS-----------LEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVL 284 (396)
T ss_pred HHccHHHHHHHHHHHhhC---CCeEEEEEeCCCCC-----------HHHHHHHHHhcCceecCCccccchhhccCceEEE
Confidence 457888999999998532 45544 3323333 233444444444421 23333
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc---cceee----CCceEEeCCCCHHH
Q 001557 550 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV---DIHRV----LDNGLLVDPHDQQS 622 (1054)
Q Consensus 550 g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~---eiv~~----~~~Gllv~p~d~~~ 622 (1054)
.+ ..++..+|+.| |++|..| |.+..|++++|+|+|.....+.. .+.+. ...++.+...+++.
T Consensus 285 ~~--~~~~~~~l~~A----DlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~ 353 (396)
T TIGR03492 285 LG--RGAFAEILHWA----DLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQ 353 (396)
T ss_pred ec--hHhHHHHHHhC----CEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHH
Confidence 33 35789999999 9999875 56669999999999998744331 11121 12455555678899
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHH
Q 001557 623 IADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSY 660 (1054)
Q Consensus 623 la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~y 660 (1054)
++++|.+++.|++.++++.+++++.. .....+.+++..
T Consensus 354 l~~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i 392 (396)
T TIGR03492 354 AAQVVRQLLADPELLERCRRNGQERMGPPGASARIAESI 392 (396)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 99999999999988877775555544 344555555443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.5e-07 Score=107.55 Aligned_cols=132 Identities=17% Similarity=0.105 Sum_probs=87.3
Q ss_pred hhcCCCCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCC
Q 001557 468 HFFSNPRKPMILALARPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 544 (1054)
Q Consensus 468 ~~~~~~~~~~Il~vgRld~---~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~ 544 (1054)
.+......+++++.|.... .+-...+++|+..+ ...+.+.+|...... ....+
T Consensus 233 ~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~~~-------------------~~~~~ 288 (401)
T cd03784 233 LFLAAGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGLGA-------------------EDLPD 288 (401)
T ss_pred HHHhCCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccccc-------------------cCCCC
Confidence 3333345567788888754 34445666666654 123434556543210 23456
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCc----ccceeeCCceEEeCCC--
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP----VDIHRVLDNGLLVDPH-- 618 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~----~eiv~~~~~Gllv~p~-- 618 (1054)
+|.+.+++++ ..+|..| |++|.- |-..++.||+++|+|+|....++- ...+...+.|+.+++.
T Consensus 289 ~v~~~~~~p~---~~ll~~~----d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~ 357 (401)
T cd03784 289 NVRVVDFVPH---DWLLPRC----AAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPREL 357 (401)
T ss_pred ceEEeCCCCH---HHHhhhh----heeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccC
Confidence 8999898764 4678889 999933 335889999999999999987652 2233445567777655
Q ss_pred CHHHHHHHHHHHHhCH
Q 001557 619 DQQSIADALLKLVSDK 634 (1054)
Q Consensus 619 d~~~la~aI~~ll~d~ 634 (1054)
+.++++++|.++++++
T Consensus 358 ~~~~l~~al~~~l~~~ 373 (401)
T cd03784 358 TAERLAAALRRLLDPP 373 (401)
T ss_pred CHHHHHHHHHHHhCHH
Confidence 6899999999999854
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.4e-07 Score=93.55 Aligned_cols=180 Identities=18% Similarity=0.151 Sum_probs=113.7
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
+|++|...|. |+..||.++.+.+|+..|++. | ++|+|.|+....+. .
T Consensus 3 kIaIiGtrGI----------Pa~YGGfET~ve~L~~~l~~~-g-~~v~Vyc~~~~~~~-------~-------------- 49 (185)
T PF09314_consen 3 KIAIIGTRGI----------PARYGGFETFVEELAPRLVSK-G-IDVTVYCRSDYYPY-------K-------------- 49 (185)
T ss_pred eEEEEeCCCC----------CcccCcHHHHHHHHHHHHhcC-C-ceEEEEEccCCCCC-------C--------------
Confidence 6999998776 466799999999999999999 8 89999998632111 0
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCC-chHHHHHHH
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD-AGDAAALLS 325 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~-a~~~a~~l~ 325 (1054)
..+..|++++.+|..... .+..+.-. +..+..++.- ...+..+.||||.+... .+++..++.
T Consensus 50 -~~~y~gv~l~~i~~~~~g----------~~~si~yd----~~sl~~al~~--~~~~~~~~~ii~ilg~~~g~~~~~~~r 112 (185)
T PF09314_consen 50 -EFEYNGVRLVYIPAPKNG----------SAESIIYD----FLSLLHALRF--IKQDKIKYDIILILGYGIGPFFLPFLR 112 (185)
T ss_pred -CcccCCeEEEEeCCCCCC----------chHHHHHH----HHHHHHHHHH--HhhccccCCEEEEEcCCccHHHHHHHH
Confidence 122359999999865331 11121111 1111112110 00112357899998865 344444443
Q ss_pred c--cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHH
Q 001557 326 G--ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403 (1054)
Q Consensus 326 ~--~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l 403 (1054)
. ..|.|++++.|++..... .| +. .....+++ .|+.+.+.||.+|+-|+...+.+...|..
T Consensus 113 ~~~~~g~~v~vN~DGlEWkR~-KW------~~-~~k~~lk~-----~E~~avk~ad~lIaDs~~I~~y~~~~y~~----- 174 (185)
T PF09314_consen 113 KLRKKGGKVVVNMDGLEWKRA-KW------GR-PAKKYLKF-----SEKLAVKYADRLIADSKGIQDYIKERYGR----- 174 (185)
T ss_pred hhhhcCCcEEECCCcchhhhh-hc------CH-HHHHHHHH-----HHHHHHHhCCEEEEcCHHHHHHHHHHcCC-----
Confidence 2 357799999998855331 11 11 01112222 47779999999999999877777666651
Q ss_pred HHHHHHhHhcccccCCCCCCcEEEeCCCCc
Q 001557 404 ERKLRARIKRGVSCHGRFMPRMVVIPPGIE 433 (1054)
Q Consensus 404 ~~~l~~r~~~gv~~~g~~~~rv~vIPnGID 433 (1054)
++..+||.|.|
T Consensus 175 -------------------~~s~~IaYGad 185 (185)
T PF09314_consen 175 -------------------KKSTFIAYGAD 185 (185)
T ss_pred -------------------CCcEEecCCCC
Confidence 27899999976
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.9e-08 Score=101.94 Aligned_cols=74 Identities=15% Similarity=0.058 Sum_probs=59.1
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccc
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEA 1035 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~ 1035 (1054)
+|..++..+++++|++++++++ +||+.| | ++|++.+|.+++|.|+. ..+. +...+++.+
T Consensus 76 ~k~~~~~~~~~~~~~~~~~~~~-vGDs~~-D-~~~~~~ag~~~~v~~~~--~~~~----------------~~a~~i~~~ 134 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPENVAY-IGDDLI-D-WPVMEKVGLSVAVADAH--PLLI----------------PRADYVTRI 134 (154)
T ss_pred chHHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCCcC--HHHH----------------HhCCEEecC
Confidence 4888999999999999999888 999999 9 99999999999999998 2222 223366676
Q ss_pred cCH-HHHHHHHHHhcc
Q 001557 1036 CDS-YDIRASLEKLGV 1050 (1054)
Q Consensus 1036 ~~~-~gI~~al~~~~~ 1050 (1054)
... +|++++++++=.
T Consensus 135 ~~~~g~~~~~~~~~~~ 150 (154)
T TIGR01670 135 AGGRGAVREVCELLLL 150 (154)
T ss_pred CCCCcHHHHHHHHHHH
Confidence 654 449999887643
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.5e-06 Score=96.55 Aligned_cols=109 Identities=21% Similarity=0.207 Sum_probs=73.2
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc----ceeeCCceEEeCCC
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD----IHRVLDNGLLVDPH 618 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e----iv~~~~~Gllv~p~ 618 (1054)
.++|.+.+++++ ..++..| |++|..+ |. .++.||+++|+|+|+....+-.. .+...+.|..++..
T Consensus 274 ~~~v~~~~~~p~---~~ll~~~----~~~I~hg---G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~ 342 (392)
T TIGR01426 274 PPNVEVRQWVPQ---LEILKKA----DAFITHG---GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPE 342 (392)
T ss_pred CCCeEEeCCCCH---HHHHhhC----CEEEECC---Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccc
Confidence 467888888875 3778888 9988653 33 47899999999999987654332 23344567777643
Q ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 001557 619 --DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLS 662 (1054)
Q Consensus 619 --d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~ 662 (1054)
+.++++++|.+++.+++.++++.+-+.+....-.-+..++...+
T Consensus 343 ~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~ 388 (392)
T TIGR01426 343 EVTAEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIEG 388 (392)
T ss_pred cCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 57899999999999987555543333322234455555544443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.9e-06 Score=97.35 Aligned_cols=263 Identities=18% Similarity=0.162 Sum_probs=150.2
Q ss_pred CcceEEEEcC-CCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHY-ADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~-~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+|.++. -...+.+++.+..++||+++.--+.-.. |. .+ ...|++ +-+-|+..++
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs~--------~~--~e------E~~r~~-----i~~la~l~f~ 150 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVTE--------GA--ID------ESIRHA-----ITKLSHLHFV 150 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccCC--------CC--ch------HHHHHH-----HHHHHhhccC
Confidence 6799999987 4677788888899999998544332110 00 00 011221 2345778888
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCC-CCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPP-GIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPn-GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
+++...+.+.+. |....++.++.| ++|.-..... . ..
T Consensus 151 ~t~~~~~~L~~e-----------------------g~~~~~i~~tG~~~iD~l~~~~~-----------------~--~~ 188 (365)
T TIGR03568 151 ATEEYRQRVIQM-----------------------GEDPDRVFNVGSPGLDNILSLDL-----------------L--SK 188 (365)
T ss_pred CCHHHHHHHHHc-----------------------CCCCCcEEEECCcHHHHHHhhhc-----------------c--CH
Confidence 888776654321 111226766655 4553222110 0 01
Q ss_pred hHHHhhhcCCCCCcEEEE-EeCC-----CCCCCHHHHHHHHHhcccccCCCcEEEEEecC-CCchhhhhchHHHHHHHHH
Q 001557 463 WSEIMHFFSNPRKPMILA-LARP-----DPKKNITTLVKAFGECRPLRELANLTLIMGNR-DDIDEMSGTNAALLLSILK 535 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~-vgRl-----d~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~-~~~~~~~~~~~~~~~~i~~ 535 (1054)
......+..++++++++. +-+- ...+.+..+++++..+ . .++.++.-.. +.. ..+...+..
T Consensus 189 ~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---~--~~~~vi~P~~~p~~-------~~i~~~i~~ 256 (365)
T TIGR03568 189 EELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL---N--KNYIFTYPNADAGS-------RIINEAIEE 256 (365)
T ss_pred HHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---c--cCCEEEEeCCCCCc-------hHHHHHHHH
Confidence 112233333334455443 3332 2223455666666554 2 1333443222 211 122333433
Q ss_pred HHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEe
Q 001557 536 LIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV 615 (1054)
Q Consensus 536 l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv 615 (1054)
+... .+++.+.+.++..++..+++.| +++|-- .-|.. .||.+.|+|+|+- |.-+|.+..+.+.++|
T Consensus 257 ~~~~---~~~v~l~~~l~~~~~l~Ll~~a----~~vitd----SSggi-~EA~~lg~Pvv~l--~~R~e~~~~g~nvl~v 322 (365)
T TIGR03568 257 YVNE---HPNFRLFKSLGQERYLSLLKNA----DAVIGN----SSSGI-IEAPSFGVPTINI--GTRQKGRLRADSVIDV 322 (365)
T ss_pred HhcC---CCCEEEECCCChHHHHHHHHhC----CEEEEc----ChhHH-HhhhhcCCCEEee--cCCchhhhhcCeEEEe
Confidence 3211 3679999999999999999999 888833 22333 8999999999954 5677887777888888
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHH
Q 001557 616 DPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSR 663 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~ 663 (1054)
+.|+++|.+++.+++ ++..++. +... ..|-....+++..+.
T Consensus 323 -g~~~~~I~~a~~~~~-~~~~~~~-----~~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 323 -DPDKEEIVKAIEKLL-DPAFKKS-----LKNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred -CCCHHHHHHHHHHHh-ChHHHHH-----HhhCCCCCCCChHHHHHHHh
Confidence 679999999999954 4433222 1222 356555566665553
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.63 E-value=1e-07 Score=97.53 Aligned_cols=71 Identities=17% Similarity=0.080 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccc
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEA 1035 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~ 1035 (1054)
.|...++.+++++|++++++++ +||+.| | ++|++.+|.++||+||. ..++..++ +++..
T Consensus 82 pkp~~~~~~~~~l~~~~~ev~~-iGD~~n-D-i~~~~~ag~~~am~nA~--~~lk~~A~----------------~I~~~ 140 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDAEVCY-VGDDLV-D-LSMMKRVGLAVAVGDAV--ADVKEAAA----------------YVTTA 140 (169)
T ss_pred CCHHHHHHHHHHcCcCHHHEEE-ECCCHH-H-HHHHHHCCCeEECcCch--HHHHHhCC----------------EEcCC
Confidence 4567899999999999999988 888888 9 99999999999999998 44444444 67666
Q ss_pred cCHHHH-HHHHHH
Q 001557 1036 CDSYDI-RASLEK 1047 (1054)
Q Consensus 1036 ~~~~gI-~~al~~ 1047 (1054)
...+|+ .+.+++
T Consensus 141 ~~~~g~v~e~~e~ 153 (169)
T TIGR02726 141 RGGHGAVREVAEL 153 (169)
T ss_pred CCCCCHHHHHHHH
Confidence 666654 444433
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.5e-08 Score=114.36 Aligned_cols=71 Identities=13% Similarity=0.156 Sum_probs=59.8
Q ss_pred CCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEec
Q 001557 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVD 1033 (1054)
Q Consensus 954 ~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t 1033 (1054)
+..|+.+++.+++++|++++++++ +||+.| | ++|++.+|.|||| ||. +.++..++ +++
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIa-VGDg~N-D-l~m~~~AGlgiA~-nAk--p~Vk~~Ad----------------~~i 303 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVA-IGDGAN-D-LPMIKAAGLGIAY-HAK--PKVNEQAQ----------------VTI 303 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEE-EECCHH-H-HHHHHHCCCeEEe-CCC--HHHHhhCC----------------EEe
Confidence 458999999999999999999999 888888 8 9999999999999 998 44444444 666
Q ss_pred cccCHHHHHHHHH
Q 001557 1034 EACDSYDIRASLE 1046 (1054)
Q Consensus 1034 ~~~~~~gI~~al~ 1046 (1054)
...+-+||..-|.
T Consensus 304 ~~~~l~~~l~~~~ 316 (322)
T PRK11133 304 RHADLMGVLCILS 316 (322)
T ss_pred cCcCHHHHHHHhc
Confidence 7778888887663
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.55 E-value=7.5e-05 Score=84.94 Aligned_cols=264 Identities=16% Similarity=0.205 Sum_probs=159.5
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+||++...-...-.....-++..|+|+++----+ +.... ..|....+ ..+..++..|.|++.
T Consensus 122 ~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRL--------------S~rS~-~~y~k~~~--~~~~~~~~i~li~aQ 184 (419)
T COG1519 122 WRPKLLIIMETELWPNLINELKRRGIPLVLVNARL--------------SDRSF-ARYAKLKF--LARLLFKNIDLILAQ 184 (419)
T ss_pred cCCCEEEEEeccccHHHHHHHHHcCCCEEEEeeee--------------chhhh-HHHHHHHH--HHHHHHHhcceeeec
Confidence 55897775532111122223456799987632211 21111 11222222 245568999999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+..+ |. +++.+.-| ........ ...+...+
T Consensus 185 se~D~~Rf~~L------------------Ga-------~~v~v~GN---lKfd~~~~---------------~~~~~~~~ 221 (419)
T COG1519 185 SEEDAQRFRSL------------------GA-------KPVVVTGN---LKFDIEPP---------------PQLAAELA 221 (419)
T ss_pred CHHHHHHHHhc------------------CC-------cceEEecc---eeecCCCC---------------hhhHHHHH
Confidence 99877765432 11 13455444 22211111 01122223
Q ss_pred HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCC
Q 001557 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 544 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~ 544 (1054)
..+.... ++++++++.+.- ..--+.+++++..+++ ..+++.+|+-.+. .+-...+.+++.+.++.-
T Consensus 222 ~~r~~l~-~~r~v~iaaSTH--~GEeei~l~~~~~l~~--~~~~~llIlVPRH---------pERf~~v~~l~~~~gl~~ 287 (419)
T COG1519 222 ALRRQLG-GHRPVWVAASTH--EGEEEIILDAHQALKK--QFPNLLLILVPRH---------PERFKAVENLLKRKGLSV 287 (419)
T ss_pred HHHHhcC-CCCceEEEecCC--CchHHHHHHHHHHHHh--hCCCceEEEecCC---------hhhHHHHHHHHHHcCCeE
Confidence 3344443 338999998882 2334568899999864 4567777666654 233667888888887631
Q ss_pred CEEeCCC-CC-----------CCcHHHHHHHhhcCCcEEEec-CCCCCCcHHHHHHHHcCCCEEEccc-cCcccc---ee
Q 001557 545 QVAYPKH-HK-----------QSDVPDIYRLAAKTKGVFINP-AFIEPFGLTLIEAAAYGLPIVATKN-GGPVDI---HR 607 (1054)
Q Consensus 545 ~V~~~g~-~~-----------~~dl~~ly~~Aa~~~dv~v~p-s~~Egfgl~l~EAmA~G~PVIat~~-Gg~~ei---v~ 607 (1054)
..+-.. .+ .-|+..+|..| |+.++- |+.+--|--++|++++|+|||.-.. --..|+ +.
T Consensus 288 -~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~a----diAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~ 362 (419)
T COG1519 288 -TRRSQGDPPFSDTDVLLGDTMGELGLLYGIA----DIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLL 362 (419)
T ss_pred -EeecCCCCCCCCCcEEEEecHhHHHHHHhhc----cEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHH
Confidence 111111 01 23789999999 887665 6665557889999999999999663 223333 23
Q ss_pred eCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHh
Q 001557 608 VLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIH 649 (1054)
Q Consensus 608 ~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~ 649 (1054)
..+.|+.|+ |.+.++.++..++++++.++++++++...+.
T Consensus 363 ~~ga~~~v~--~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 363 QAGAGLQVE--DADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred hcCCeEEEC--CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 334578887 6889999999999999999999999999884
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.54 E-value=9.6e-06 Score=92.52 Aligned_cols=112 Identities=14% Similarity=0.222 Sum_probs=74.0
Q ss_pred CCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcC
Q 001557 488 KNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 567 (1054)
Q Consensus 488 Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~ 567 (1054)
.+...+++++..+ +++.+++|+.+.. .+ .+.+++.+.++.+ +++.++|..|
T Consensus 198 ~~~~~l~~~l~~~------~~~~~i~~~~~~~-----------------~~--~~~~~v~~~~~~~-~~~~~~l~~a--- 248 (321)
T TIGR00661 198 EYRYKILELLGKI------ANVKFVCYSYEVA-----------------KN--SYNENVEIRRITT-DNFKELIKNA--- 248 (321)
T ss_pred CCHHHHHHHHHhC------CCeEEEEeCCCCC-----------------cc--ccCCCEEEEECCh-HHHHHHHHhC---
Confidence 3556777877665 3455666643210 01 1235788877755 6899999999
Q ss_pred CcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc------ceeeCCceEEeCCCCHHHHHHHHHHHHhCH
Q 001557 568 KGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD------IHRVLDNGLLVDPHDQQSIADALLKLVSDK 634 (1054)
Q Consensus 568 ~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e------iv~~~~~Gllv~p~d~~~la~aI~~ll~d~ 634 (1054)
|++|.-+ | ..++.||+++|+|+|.....+..| .+...+.|+.++..+. ++.+++...++++
T Consensus 249 -d~vI~~~---G-~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~~~~~~~ 315 (321)
T TIGR00661 249 -ELVITHG---G-FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAILDIRNMK 315 (321)
T ss_pred -CEEEECC---C-hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHHhccccc
Confidence 9999765 2 247999999999999988765434 2344466888877666 5555555555443
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.2e-06 Score=84.84 Aligned_cols=128 Identities=22% Similarity=0.327 Sum_probs=80.9
Q ss_pred hHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcccccccC
Q 001557 194 VKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELL 273 (1054)
Q Consensus 194 ~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l 273 (1054)
..++.++++.|.+. | ++|+++|.... + .. .....++.+++++.+.+ . .
T Consensus 10 ~~~~~~~~~~L~~~-g-~~V~ii~~~~~-------~-~~---------------~~~~~~i~~~~~~~~~k------~-~ 57 (139)
T PF13477_consen 10 STFIYNLAKELKKR-G-YDVHIITPRND-------Y-EK---------------YEIIEGIKVIRLPSPRK------S-P 57 (139)
T ss_pred HHHHHHHHHHHHHC-C-CEEEEEEcCCC-------c-hh---------------hhHhCCeEEEEecCCCC------c-c
Confidence 45788999999999 8 99999997421 1 00 11235889998865422 0 1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCc-hHHHHHHHccCC-CCEEEEeCCCccchHHHHHHhC
Q 001557 274 WPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA-GDAAALLSGALN-VPMVFTGHSLGRDKLEQLLKQG 351 (1054)
Q Consensus 274 ~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a-~~~a~~l~~~~~-iP~V~t~H~l~~~~~~~l~~~g 351 (1054)
++++ . ...+.+.+.+ .+|||||+|...+ ++++.++++..+ +|+|++.|+...... +
T Consensus 58 ~~~~--------~-~~~l~k~ik~-------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~------~ 115 (139)
T PF13477_consen 58 LNYI--------K-YFRLRKIIKK-------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNS------S 115 (139)
T ss_pred HHHH--------H-HHHHHHHhcc-------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecC------C
Confidence 2221 1 1123333333 5699999999754 788888878888 999999998643110 0
Q ss_pred CCChhhhhhHhHHHHHHHHHHhhhccCCEEEecC
Q 001557 352 RLSRDEINTTYKIMRRIEAEELSLDASEIVITST 385 (1054)
Q Consensus 352 ~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S 385 (1054)
. ..++.+. .++.+++.+|.|++.|
T Consensus 116 ~--------~~~~~~~--~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 116 K--------KKKLKKF--IIKFAFKRADKIIVQS 139 (139)
T ss_pred c--------hHHHHHH--HHHHHHHhCCEEEEcC
Confidence 0 0011222 2556899999999865
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.3e-08 Score=99.77 Aligned_cols=45 Identities=18% Similarity=0.079 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcc
Q 001557 957 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVG 1004 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~ 1004 (1054)
|..+++.+++++|++++++++ +||+.+ | ++|++.+|.+++|+++.
T Consensus 97 k~~~l~~~~~~~gl~~~ev~~-VGDs~~-D-~~~a~~aG~~~~v~~~~ 141 (183)
T PRK09484 97 KLIAFSDLLEKLAIAPEQVAY-IGDDLI-D-WPVMEKVGLSVAVADAH 141 (183)
T ss_pred HHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCChh
Confidence 568899999999999999988 888888 9 99999999999998665
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.1e-05 Score=91.58 Aligned_cols=118 Identities=19% Similarity=0.305 Sum_probs=78.8
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001557 473 PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH 552 (1054)
Q Consensus 473 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 552 (1054)
+...+++++|..+.. .+++++..+. ...+. ++|.... +. -.++|.+.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~~----~~~~~-v~g~~~~-~~--------------------~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKALP----DYQFI-VFGPNAA-DP--------------------RPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhCC----CCeEE-EEcCCcc-cc--------------------cCCCEEEeecC
Confidence 345688999988776 6677777762 33443 4465421 00 04678877763
Q ss_pred CCCcHHHHHHHhhcCCcEEEecCCCCCCcH-HHHHHHHcCCCEEEccccCcccc------eeeCCceEEeCCC--CHHHH
Q 001557 553 KQSDVPDIYRLAAKTKGVFINPAFIEPFGL-TLIEAAAYGLPIVATKNGGPVDI------HRVLDNGLLVDPH--DQQSI 623 (1054)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl-~l~EAmA~G~PVIat~~Gg~~ei------v~~~~~Gllv~p~--d~~~l 623 (1054)
..++.+++..| |++|.-+ |. ++.|++++|+|+|.-...+..|- ++..+.|..+++. +++.+
T Consensus 241 -~~~~~~~m~~a----d~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l 310 (318)
T PF13528_consen 241 -TPDFAELMAAA----DLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERL 310 (318)
T ss_pred -hHHHHHHHHhC----CEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHH
Confidence 36899999999 9998653 54 49999999999999887554442 2233456666533 57888
Q ss_pred HHHHHHH
Q 001557 624 ADALLKL 630 (1054)
Q Consensus 624 a~aI~~l 630 (1054)
+++|.++
T Consensus 311 ~~~l~~~ 317 (318)
T PF13528_consen 311 AEFLERL 317 (318)
T ss_pred HHHHhcC
Confidence 8888653
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.9e-06 Score=95.97 Aligned_cols=318 Identities=18% Similarity=0.228 Sum_probs=176.8
Q ss_pred eEEEEcCCCchHHHHHH-HccCCCCEEEEeCCCccchHHHHHHhCCC---------ChhhhhhHhHHHHHHHHHHhhhcc
Q 001557 308 VAIHGHYADAGDAAALL-SGALNVPMVFTGHSLGRDKLEQLLKQGRL---------SRDEINTTYKIMRRIEAEELSLDA 377 (1054)
Q Consensus 308 DVIh~h~~~a~~~a~~l-~~~~~iP~V~t~H~l~~~~~~~l~~~g~~---------~~~~i~~~~~~~~ri~~E~~~l~~ 377 (1054)
-|.|.|.|.+|....+. ++++.|-+|||.|..-. .+++..|.. .-+.-.....+..|...|+.+...
T Consensus 176 vVahFHEW~AGVgL~l~R~rrl~iaTifTTHATLL---GRyLCA~~~DfYNnLd~f~vD~EAGkr~IYHrYC~ERaa~h~ 252 (692)
T KOG3742|consen 176 VVAHFHEWQAGVGLILCRARRLDIATIFTTHATLL---GRYLCAGNVDFYNNLDSFDVDKEAGKRQIYHRYCLERAAAHT 252 (692)
T ss_pred HHHHHHHHHhccchheehhcccceEEEeehhHHHH---HHHHhcccchhhhchhhcccchhhccchhHHHHHHHHHhhhh
Confidence 45677778766533322 34456667999996421 112222211 111112234567788888888999
Q ss_pred CCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCC
Q 001557 378 SEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPAS 457 (1054)
Q Consensus 378 ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~ 457 (1054)
|+...++|+-.+-+-..+... ..=.+.|||.+...|.. +.++++..+.
T Consensus 253 AhVFTTVSeITa~EAeHlLkR------------------------KPD~itPNGLNV~KFsA--------~HEFQNLHA~ 300 (692)
T KOG3742|consen 253 AHVFTTVSEITALEAEHLLKR------------------------KPDVITPNGLNVKKFSA--------VHEFQNLHAQ 300 (692)
T ss_pred hhhhhhHHHHHHHHHHHHHhc------------------------CCCeeCCCCcceeehhH--------HHHHHHHHHH
Confidence 998888887444332222111 03467899999999873 2233333333
Q ss_pred CCCchhHHHhhhcC-----C-CCCcEEEEEeCCCC-CCCHHHHHHHHHhcccc---cCCCc-EE-E-EEec---CCCchh
Q 001557 458 PDPPIWSEIMHFFS-----N-PRKPMILALARPDP-KKNITTLVKAFGECRPL---RELAN-LT-L-IMGN---RDDIDE 521 (1054)
Q Consensus 458 ~~~~~~~~~~~~~~-----~-~~~~~Il~vgRld~-~Kgi~~ll~A~~~l~~~---~~~~~-l~-L-IiG~---~~~~~~ 521 (1054)
....+.+.++..|. + ....+++..||... .||-+.+|+++.++.-+ ...+. ++ + |+-. .-..+.
T Consensus 301 ~KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVes 380 (692)
T KOG3742|consen 301 KKEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVES 380 (692)
T ss_pred HHHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhh
Confidence 44555555555432 1 23345666788884 79999999999988421 22222 22 2 4421 111222
Q ss_pred hhhch---------HHHHHHH--------------------------------------------------------HHH
Q 001557 522 MSGTN---------AALLLSI--------------------------------------------------------LKL 536 (1054)
Q Consensus 522 ~~~~~---------~~~~~~i--------------------------------------------------------~~l 536 (1054)
++.+. .++.+.+ +..
T Consensus 381 LkgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~ 460 (692)
T KOG3742|consen 381 LKGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSS 460 (692)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHH
Confidence 22111 0111110 000
Q ss_pred HHHcCC----CCC--EEeCC-CC------CCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc
Q 001557 537 IDKYDL----YGQ--VAYPK-HH------KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV 603 (1054)
Q Consensus 537 ~~~~~l----~~~--V~~~g-~~------~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~ 603 (1054)
+.+.++ .++ |.|++ ++ =.-|..++.+.| ++.|+||.+||+|.+..|.-.+|+|-|+|+..|.-
T Consensus 461 iRr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGC----HLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFG 536 (692)
T KOG3742|consen 461 IRRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFG 536 (692)
T ss_pred hHhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccc----cccccccccCCCCCCchheEEeccccccccccchh
Confidence 111111 011 11211 11 112677888999 99999999999999999999999999999987654
Q ss_pred c----ceeeC-CceEEe-C------CCCHHHHHHHHHHHHhCHHHHHHHHHHHH-HHH-hcCCHHHHHHHHHHHHH
Q 001557 604 D----IHRVL-DNGLLV-D------PHDQQSIADALLKLVSDKQLWERCRQNGL-KNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 604 e----iv~~~-~~Gllv-~------p~d~~~la~aI~~ll~d~~~~~~~~~~~~-~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
- .|++. ..|+.+ + ..+.+++++-+...... ..+|++-++.+ +.+ ...+|......|.+.=.
T Consensus 537 cfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F~~q-sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~ 611 (692)
T KOG3742|consen 537 CFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEFCKQ-SRRQRIIQRNRTERLSDLLDWKYLGRYYRKARH 611 (692)
T ss_pred hhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHHHHH-HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHH
Confidence 3 33322 246654 2 23456677777666542 33454444444 334 47899988888876543
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.33 E-value=8.3e-07 Score=90.05 Aligned_cols=67 Identities=12% Similarity=0.018 Sum_probs=56.2
Q ss_pred EEEEEecCCC---C-----------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHH---HHHHh-----CCCCC
Q 001557 771 VFVIAADCDT---T-----------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELH---SLLVS-----GGLSP 828 (1054)
Q Consensus 771 Liv~DiDGTL---~-----------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~---~~l~~-----l~l~~ 828 (1054)
+|++|||||| + ..+++.+.+++++++++ |+.|+++|||+...+. +++.. .+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~----G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp- 75 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN----GYKILYLTARPIGQADRTRSYLSQIKQDGHNLP- 75 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc----CCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC-
Confidence 5899999999 2 46799999999999997 8999999999999884 78887 3352
Q ss_pred CCCcEEEEcCCcEEEc
Q 001557 829 LAFDAFICNSGSELYY 844 (1054)
Q Consensus 829 ~~~d~lI~~nGa~I~~ 844 (1054)
+..+||+||+.++.
T Consensus 76 --~g~li~~~g~~~~~ 89 (157)
T smart00775 76 --HGPVLLSPDRLFAA 89 (157)
T ss_pred --CceEEEcCCcchhh
Confidence 25899999998863
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.29 E-value=0.0001 Score=82.39 Aligned_cols=98 Identities=20% Similarity=0.306 Sum_probs=73.9
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001557 475 KPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQ 554 (1054)
Q Consensus 475 ~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~ 554 (1054)
+.+++++|..++.+....+++++..+ ....++.+|+|..... ..++.+.+... +++.+.+++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~i~vv~G~~~~~----------~~~l~~~~~~~---~~i~~~~~~-- 232 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAES---QINISITLVTGSSNPN----------LDELKKFAKEY---PNIILFIDV-- 232 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhcc---ccCceEEEEECCCCcC----------HHHHHHHHHhC---CCEEEEeCH--
Confidence 45789999999977667888888765 2345677788876421 23455555543 468887774
Q ss_pred CcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc
Q 001557 555 SDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 599 (1054)
Q Consensus 555 ~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~ 599 (1054)
++++++|+.| |++|.+ .|.|+.|++++|+|+|+-..
T Consensus 233 ~~m~~lm~~a----Dl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 233 ENMAELMNEA----DLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred HHHHHHHHHC----CEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 6899999999 999974 47999999999999998765
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=98.17 E-value=7e-06 Score=90.06 Aligned_cols=70 Identities=16% Similarity=0.149 Sum_probs=59.2
Q ss_pred EEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEcC---CCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEc
Q 001557 770 YVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTA---LTILELHSLLVSGGLSPLAFDAFICNSGSELYY 844 (1054)
Q Consensus 770 kLiv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaTG---R~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~ 844 (1054)
|+|+||+|||| .....+.+.++|++++++ |+.|+++|| |+...+...++.+|++. .+|-+|+++|+.+.|
T Consensus 2 ~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~----g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~-~~~~iit~~~~~~~~ 76 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKERIPEAETFVHELQKR----DIPYLFVTNNSTRTPESVAEMLASFDIPA-TLETVFTASMATADY 76 (249)
T ss_pred CEEEEeCCCceEcCCeeCcCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEeeHHHHHHHH
Confidence 68999999999 333445789999999997 899999995 99999999999999974 567899999987644
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.12 E-value=4.1e-06 Score=81.52 Aligned_cols=52 Identities=19% Similarity=0.210 Sum_probs=46.3
Q ss_pred EEEEEecCCC--Ch---------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 771 VFVIAADCDT--TS---------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 771 Liv~DiDGTL--~~---------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
+++||+|||| .. .+.+.+.+.|+.++++ |+.++|+|||....+..+++.+++
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK----GIKLALATNKSRREVLELLEELGL 63 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC----CCeEEEEeCchHHHHHHHHHHcCC
Confidence 4899999999 22 6778899999999986 899999999999999999999887
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00043 Score=77.65 Aligned_cols=124 Identities=14% Similarity=0.148 Sum_probs=102.7
Q ss_pred CCCCCEEeCCCCCC-CcHHHHHHHhhcCCcEEEecCC---CCC---CcHHHHHHHHcCCCEEEccccCcccceeeCCceE
Q 001557 541 DLYGQVAYPKHHKQ-SDVPDIYRLAAKTKGVFINPAF---IEP---FGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGL 613 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~-~dl~~ly~~Aa~~~dv~v~ps~---~Eg---fgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gl 613 (1054)
.+.+++.+.|+.+. ..++..++-- +++++-+. .++ ++.-+.|+++||.|.|+...-+..-.+..+..-+
T Consensus 234 ~~~~~~~yIg~~~~~~~v~~~~~~~----~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~i 309 (373)
T COG4641 234 TWEPNVQYIGYYNPKDGVPNAFKRD----DVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDII 309 (373)
T ss_pred cccchhhhhhccCccchhhhccccc----ceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheE
Confidence 35567778888777 7788888888 88887654 222 3778999999999999999888888877765544
Q ss_pred EeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhhhc
Q 001557 614 LVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSCKQR 670 (1054)
Q Consensus 614 lv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~~~~ 670 (1054)
+. .|..++.+.+..++..+++++++.+.+++.+ ..|+.++-+..++..+..+..+
T Consensus 310 v~--~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI~~r 365 (373)
T COG4641 310 VY--QDSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIASINIR 365 (373)
T ss_pred Ee--cCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHh
Confidence 44 5999999999999999999999999999999 5899999999999999886654
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.07 E-value=3.3e-05 Score=77.97 Aligned_cols=195 Identities=14% Similarity=0.130 Sum_probs=110.6
Q ss_pred CCCEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCC-CCCcEEEEcCCcEE
Q 001557 767 RRKYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSP-LAFDAFICNSGSEL 842 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL~---~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~-~~~d~lI~~nGa~I 842 (1054)
.++-|+.||+||||+ ..++++..+.|+.+++ .+.+.++-|-.++-+.+-+ |-+. ..|||.-++||-.-
T Consensus 9 ~~~~l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~-----~v~ig~VggsDl~k~~eql---G~~Vl~~fDY~F~ENGl~~ 80 (252)
T KOG3189|consen 9 DEETLCLFDVDGTLTPPRQKVTPEMLEFLQKLRK-----KVTIGFVGGSDLSKQQEQL---GDNVLEEFDYVFSENGLVA 80 (252)
T ss_pred CCceEEEEecCCccccccccCCHHHHHHHHHHhh-----heEEEEeecHHHHHHHHHh---chhHHhhhcccccCCCeeE
Confidence 455799999999995 6789999999999886 4777788887766555544 4221 56899999999988
Q ss_pred EcCCCCCCCCCCCccccCccchhhhccccChhhHHHHHH----HhhhhccCCCCccCcccccccccCcceEEEEEecCC-
Q 001557 843 YYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLV----RWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNP- 917 (1054)
Q Consensus 843 ~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~- 917 (1054)
|..+ +.+.......|+. .+.+++++. -+.......+- ...+ +-.... ..+|=.-++.
T Consensus 81 yk~g---------k~~~~Qsi~~~LG----ee~~q~liNF~LrYlsdidlPiKR--GtFi-EFRNgM--iNvsPIGR~cs 142 (252)
T KOG3189|consen 81 YKGG---------KLLSKQSIINHLG----EEKLQELINFCLRYLSDIDLPIKR--GTFI-EFRNGM--INVSPIGRNCS 142 (252)
T ss_pred eeCC---------cchhHHHHHHHHh----HHHHHHHHHHHHHHHHhcCCcccc--cceE-EecCCc--eeccccccccC
Confidence 8765 2332222222332 223333322 11111111110 0111 100000 0000000000
Q ss_pred ----------CCCc-cHHHHHHHHHHhcCeEEEEEeeCCe-EEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCc----
Q 001557 918 ----------QMIP-PVKELRKLMRIQALRCHVIYCQNGT-KLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE---- 981 (1054)
Q Consensus 918 ----------~~~~-~~~el~~~l~~~~~~~~v~~s~~~~-~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD---- 981 (1054)
+... .-+.+-+.|+.......+++|-++. .+||.|.|-.|-.-|++|-.. |.+ ++-|+||
T Consensus 143 ~EER~eF~e~Dkk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-gf~---~IhFFGDkT~~ 218 (252)
T KOG3189|consen 143 QEERNEFEELDKKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-GFD---TIHFFGDKTMP 218 (252)
T ss_pred HHHHHHHHHhhhhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-CCc---eEEEeccccCC
Confidence 0000 1112233344444456667776643 699999999999999998776 776 7788988
Q ss_pred CCCccccccccC
Q 001557 982 CGDTDYEGLLGG 993 (1054)
Q Consensus 982 ~~d~D~~eML~~ 993 (1054)
++| | .+.|.-
T Consensus 219 GGN-D-yEIf~d 228 (252)
T KOG3189|consen 219 GGN-D-YEIFAD 228 (252)
T ss_pred CCC-c-ceeeeC
Confidence 468 8 677753
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.0014 Score=74.45 Aligned_cols=66 Identities=26% Similarity=0.262 Sum_probs=50.2
Q ss_pred cHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccC---cccceeeCCceEEeCCCCHHHHHHHHHHHHh
Q 001557 556 DVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG---PVDIHRVLDNGLLVDPHDQQSIADALLKLVS 632 (1054)
Q Consensus 556 dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg---~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~ 632 (1054)
+...++..| |++| -+-|....||+..|+|.|++..|- .-+.+. ..|+++.-.|++++.+.+.+.+.
T Consensus 241 d~~~Ll~~a----~l~I-----g~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 241 DGLDLLYYA----DLVI-----GGGGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLG 309 (335)
T ss_pred CHHHHHHhc----CEEE-----eCCcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhh
Confidence 566889999 8988 344777899999999999987653 223332 45889998999999987766554
|
They are found in archaea and some bacteria and have no known function. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.6e-06 Score=83.09 Aligned_cols=62 Identities=15% Similarity=0.089 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccc
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEA 1035 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~ 1035 (1054)
+|-.|...|+++++++++++.. +||+-+ | +++|+.+|.++|+.+|. |...+.+.|||..
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ay-iGDD~~-D-lpvm~~vGls~a~~dAh------------------~~v~~~a~~Vt~~ 141 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAY-VGDDLV-D-LPVMEKVGLSVAVADAH------------------PLLKQRADYVTSK 141 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhh-hcCccc-c-HHHHHHcCCcccccccC------------------HHHHHhhHhhhhc
Confidence 3777888899999999999977 777777 7 99999999999999999 5555666677655
Q ss_pred cCH
Q 001557 1036 CDS 1038 (1054)
Q Consensus 1036 ~~~ 1038 (1054)
-.-
T Consensus 142 ~GG 144 (170)
T COG1778 142 KGG 144 (170)
T ss_pred cCc
Confidence 443
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.0024 Score=77.30 Aligned_cols=164 Identities=12% Similarity=0.109 Sum_probs=99.5
Q ss_pred HHhhhcCCCC-CcEEEEEeCCCC-----CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHH
Q 001557 465 EIMHFFSNPR-KPMILALARPDP-----KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 538 (1054)
Q Consensus 465 ~~~~~~~~~~-~~~Il~vgRld~-----~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~ 538 (1054)
++..+..... ..++++.|.... .+-+..+++|++.+. .++.+-.++ +.. .
T Consensus 286 ~l~~fl~~~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~-~~~------------------~ 341 (507)
T PHA03392 286 YLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDG-EVE------------------A 341 (507)
T ss_pred HHHHHHhcCCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECC-CcC------------------c
Confidence 3444443333 367788888643 234567778887762 133222232 110 0
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHH--HhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCc----ccceeeCCce
Q 001557 539 KYDLYGQVAYPKHHKQSDVPDIYR--LAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP----VDIHRVLDNG 612 (1054)
Q Consensus 539 ~~~l~~~V~~~g~~~~~dl~~ly~--~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~----~eiv~~~~~G 612 (1054)
.++.++|.+.+++|+. ++++ .+ ++||. -|-..++.||+.+|+|+|+-...+= ...+...+.|
T Consensus 342 -~~~p~Nv~i~~w~Pq~---~lL~hp~v----~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G 409 (507)
T PHA03392 342 -INLPANVLTQKWFPQR---AVLKHKNV----KAFVT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIG 409 (507)
T ss_pred -ccCCCceEEecCCCHH---HHhcCCCC----CEEEe----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcE
Confidence 1345789999999875 4553 35 77773 2446789999999999999886431 1223344568
Q ss_pred EEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHH
Q 001557 613 LLVDPH--DQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 613 llv~p~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l 664 (1054)
+.++.. +.+++.+||.+++++|.-++.+.+-+.... +..+-.+-|-.+.+.+
T Consensus 410 ~~l~~~~~t~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v 464 (507)
T PHA03392 410 RALDTVTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHV 464 (507)
T ss_pred EEeccCCcCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 887653 678999999999999876555544444433 3344444444444443
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00015 Score=83.48 Aligned_cols=272 Identities=17% Similarity=0.190 Sum_probs=138.6
Q ss_pred CcceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+|..+.- ...+++++.+..++||+++---++-. +......... ..|.. +-+-|+..++
T Consensus 66 ~~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs---------~d~~~g~~de---~~R~~-----i~~la~lhf~ 128 (346)
T PF02350_consen 66 EKPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRS---------GDRTEGMPDE---INRHA-----IDKLAHLHFA 128 (346)
T ss_dssp HT-SEEEEETTSHHHHHHHHHHHHTT-EEEEES--------------S-TTSSTTHH---HHHHH-----HHHH-SEEEE
T ss_pred cCCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCc---------cccCCCCchh---hhhhh-----hhhhhhhhcc
Confidence 46999998863 56777788888999996554433211 1111001111 22222 4567999999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCC-CcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPG-IEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnG-ID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
+|+...+.+.+. +. +..+|.++-+- +|.-...... ..+.
T Consensus 129 ~t~~~~~~L~~~--G~---------------------~~~rI~~vG~~~~D~l~~~~~~----------------~~~~- 168 (346)
T PF02350_consen 129 PTEEARERLLQE--GE---------------------PPERIFVVGNPGIDALLQNKEE----------------IEEK- 168 (346)
T ss_dssp SSHHHHHHHHHT--T-----------------------GGGEEE---HHHHHHHHHHHT----------------TCC--
T ss_pred CCHHHHHHHHhc--CC---------------------CCCeEEEEChHHHHHHHHhHHH----------------Hhhh-
Confidence 999888776442 22 22378877663 3432111100 0000
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCC----CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHH
Q 001557 463 WSEIMHFFSNPRKPMILALARPDP----KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 538 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~----~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~ 538 (1054)
.. ...+.....++++|...-... ......+.+++..+.+. ....+.+.+.+-| .....+.+.+.
T Consensus 169 ~~-~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~~i~~~l~ 236 (346)
T PF02350_consen 169 YK-NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSDIIIEKLK 236 (346)
T ss_dssp HH-HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHHHHHHHHT
T ss_pred hh-hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHHHHHHHhc
Confidence 00 011211245566555543222 23456777777777543 2223333334322 22344555555
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHH-HHHHcCCCEEEcc-ccCcccceeeCCceEEeC
Q 001557 539 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLI-EAAAYGLPIVATK-NGGPVDIHRVLDNGLLVD 616 (1054)
Q Consensus 539 ~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~-EAmA~G~PVIat~-~Gg~~eiv~~~~~Gllv~ 616 (1054)
++ +++.+..+++..++..+++.| +++|- ..| .+. ||..+|+|+|.-. .|.-++.+..+ ...+|.
T Consensus 237 ~~---~~v~~~~~l~~~~~l~ll~~a----~~vvg-----dSs-GI~eEa~~lg~P~v~iR~~geRqe~r~~~-~nvlv~ 302 (346)
T PF02350_consen 237 KY---DNVRLIEPLGYEEYLSLLKNA----DLVVG-----DSS-GIQEEAPSLGKPVVNIRDSGERQEGRERG-SNVLVG 302 (346)
T ss_dssp T----TTEEEE----HHHHHHHHHHE----SEEEE-----SSH-HHHHHGGGGT--EEECSSS-S-HHHHHTT-SEEEET
T ss_pred cc---CCEEEECCCCHHHHHHHHhcc----eEEEE-----cCc-cHHHHHHHhCCeEEEecCCCCCHHHHhhc-ceEEeC
Confidence 55 389999999999999999999 78763 236 666 9999999999985 45555655544 445575
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001557 617 PHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 617 p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l 664 (1054)
.|.++|.++|.+++.+++.+.++.. ....|.=...+++..+++
T Consensus 303 -~~~~~I~~ai~~~l~~~~~~~~~~~----~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 303 -TDPEAIIQAIEKALSDKDFYRKLKN----RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp -SSHHHHHHHHHHHHH-HHHHHHHHC----S--TT-SS-HHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhChHHHHhhcc----CCCCCCCCcHHHHHHHhh
Confidence 7999999999999987544433221 113454445555555554
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.92 E-value=2.5e-05 Score=83.23 Aligned_cols=52 Identities=23% Similarity=0.286 Sum_probs=45.9
Q ss_pred EEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 947 KLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 947 ~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
.+-.+-.+-+|..+|+.++..+|++++++++ .||+.| | ++||+.+|++||..
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a-~gDs~n-D-lpml~~ag~~ia~n 186 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELGIPLEETVA-YGDSAN-D-LPMLEAAGLPIAVN 186 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcCCCHHHeEE-EcCchh-h-HHHHHhCCCCeEeC
Confidence 3444555568999999999999999999999 999999 9 99999999999995
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.87 E-value=3.1e-05 Score=84.62 Aligned_cols=72 Identities=18% Similarity=0.012 Sum_probs=58.4
Q ss_pred CCCEEEEEEecCCC-C--hhh---HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCc
Q 001557 767 RRKYVFVIAADCDT-T--SDF---LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGS 840 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL-~--~~i---~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa 840 (1054)
...++||||+|||| + +.+ ++.+.++|++|+++ |+.++|+|+++...+...++.+|+. .-|| .|+++|.
T Consensus 124 ~~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~Lkek----GikLaIaTS~~Re~v~~~L~~lGLd-~YFd-vIIs~Gd 197 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKR----GCILVLWSYGDRDHVVESMRKVKLD-RYFD-IIISGGH 197 (301)
T ss_pred ccceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHcCCC-cccC-EEEECCc
Confidence 44599999999999 2 334 59999999999997 9999999999999999999999995 2345 4555776
Q ss_pred EEEc
Q 001557 841 ELYY 844 (1054)
Q Consensus 841 ~I~~ 844 (1054)
....
T Consensus 198 v~~~ 201 (301)
T TIGR01684 198 KAEE 201 (301)
T ss_pred cccC
Confidence 6554
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.026 Score=67.71 Aligned_cols=142 Identities=9% Similarity=0.034 Sum_probs=80.0
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 474 RKPMILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 474 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
+..+++++|.... .+-+..++++++.+. ..+.+++. .+ .. .+.+. . .+++.+.++
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~-----~~~lw~~~-~~-~~-----------~~~~~---~--~~~~~v~~w 330 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDSG-----VRFLWVAR-GE-AS-----------RLKEI---C--GDMGLVVPW 330 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhCC-----CCEEEEEc-Cc-hh-----------hHhHh---c--cCCEEEecc
Confidence 3456778887632 233566777776652 24433332 21 00 01111 1 135667788
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccc----eee-CCceEEeC-------CCC
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDI----HRV-LDNGLLVD-------PHD 619 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~ei----v~~-~~~Gllv~-------p~d 619 (1054)
.|+.+ ++..++ .++||. -+-..+++||+++|+|+|+-...+=.-. +.+ .+.|+-+. .-+
T Consensus 331 ~pQ~~---iL~h~~--v~~fvt----HgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~ 401 (459)
T PLN02448 331 CDQLK---VLCHSS--VGGFWT----HCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVG 401 (459)
T ss_pred CCHHH---HhccCc--cceEEe----cCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCc
Confidence 88775 444441 023552 2334588999999999999886543222 222 23566653 237
Q ss_pred HHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001557 620 QQSIADALLKLVSDK-QLWERCRQNGLKN 647 (1054)
Q Consensus 620 ~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 647 (1054)
.+++++++++++.++ ++..++++++.+.
T Consensus 402 ~~~l~~av~~vl~~~~~~~~~~r~~a~~~ 430 (459)
T PLN02448 402 REEIAELVKRFMDLESEEGKEMRRRAKEL 430 (459)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 899999999999864 3444555555443
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.84 E-value=3.3e-05 Score=74.84 Aligned_cols=54 Identities=11% Similarity=0.007 Sum_probs=43.7
Q ss_pred EEEEEEecCCCC----h-----hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHH---------------HHHHHHHhCC
Q 001557 770 YVFVIAADCDTT----S-----DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL---------------ELHSLLVSGG 825 (1054)
Q Consensus 770 kLiv~DiDGTL~----~-----~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~---------------~i~~~l~~l~ 825 (1054)
|+|++|+||||. + .+.+.++++|++++++ |+.|+++|||+.. .+..||.+.+
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~----G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ 77 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKAL----GFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHN 77 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHC----CCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcC
Confidence 689999999992 1 2457888888888776 8999999999876 4468888888
Q ss_pred CC
Q 001557 826 LS 827 (1054)
Q Consensus 826 l~ 827 (1054)
++
T Consensus 78 ip 79 (126)
T TIGR01689 78 VP 79 (126)
T ss_pred CC
Confidence 85
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0023 Score=72.63 Aligned_cols=274 Identities=18% Similarity=0.198 Sum_probs=171.1
Q ss_pred CcceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+|..|.- .+.+++++.+...+||+.+---++-. +... ..--+.|++ .-.-|+.-++
T Consensus 91 ~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt---------~~~~-----~PEE~NR~l-----~~~~S~~hfa 151 (383)
T COG0381 91 EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT---------GDLY-----FPEEINRRL-----TSHLSDLHFA 151 (383)
T ss_pred hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc---------CCCC-----CcHHHHHHH-----HHHhhhhhcC
Confidence 67999988863 55667788888889999886665411 1111 001112332 4456888899
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCC-cCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGI-EFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGI-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
+|....+.+.+ .|.+..++.|+.|-+ |.-....... ......
T Consensus 152 pte~ar~nLl~-----------------------EG~~~~~IfvtGnt~iDal~~~~~~~--------------~~~~~~ 194 (383)
T COG0381 152 PTEIARKNLLR-----------------------EGVPEKRIFVTGNTVIDALLNTRDRV--------------LEDSKI 194 (383)
T ss_pred ChHHHHHHHHH-----------------------cCCCccceEEeCChHHHHHHHHHhhh--------------ccchhh
Confidence 99877666532 233334788888864 3222210000 001111
Q ss_pred hHHHhhhcCCCCCcEEEEEe-CCCC-CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHH-HHH
Q 001557 463 WSEIMHFFSNPRKPMILALA-RPDP-KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKL-IDK 539 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vg-Rld~-~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l-~~~ 539 (1054)
.. .++...++++|+..+ |-.- .+++..+++|+.++.+.. +++.+|.-..+. ..++.. ...
T Consensus 195 ~~---~~~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~--~~~~viyp~H~~------------~~v~e~~~~~ 257 (383)
T COG0381 195 LA---KGLDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEY--PDVIVIYPVHPR------------PRVRELVLKR 257 (383)
T ss_pred HH---hhhccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhC--CCceEEEeCCCC------------hhhhHHHHHH
Confidence 11 112344555655544 3332 288899999998887544 566666665543 122233 355
Q ss_pred cCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc-cCcccceeeCCceEEeCCC
Q 001557 540 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRVLDNGLLVDPH 618 (1054)
Q Consensus 540 ~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~-Gg~~eiv~~~~~Gllv~p~ 618 (1054)
++-.++|.+...+...+...|+..| .++++ -.|-..-||-..|+||++-+. ..-+|-+.. +.-.+|. .
T Consensus 258 L~~~~~v~li~pl~~~~f~~L~~~a-----~~ilt----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~a-gt~~lvg-~ 326 (383)
T COG0381 258 LKNVERVKLIDPLGYLDFHNLMKNA-----FLILT----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEA-GTNILVG-T 326 (383)
T ss_pred hCCCCcEEEeCCcchHHHHHHHHhc-----eEEEe----cCCchhhhHHhcCCcEEeeccCCCCccceec-CceEEeC-c
Confidence 6656679999999999999999999 55655 337778899999999998774 344565543 4556775 5
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001557 619 DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 619 d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
+.+.+.+++.+++++++..++|+... ..|.=...++++++.+..
T Consensus 327 ~~~~i~~~~~~ll~~~~~~~~m~~~~----npYgdg~as~rIv~~l~~ 370 (383)
T COG0381 327 DEENILDAATELLEDEEFYERMSNAK----NPYGDGNASERIVEILLN 370 (383)
T ss_pred cHHHHHHHHHHHhhChHHHHHHhccc----CCCcCcchHHHHHHHHHH
Confidence 88999999999999998877655422 356555566666666653
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00033 Score=76.74 Aligned_cols=64 Identities=9% Similarity=-0.009 Sum_probs=50.4
Q ss_pred EEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHH---HHHhCCCCCCCCcEEEEcC
Q 001557 770 YVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHS---LLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 770 kLiv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~---~l~~l~l~~~~~d~lI~~n 838 (1054)
++|+||+|||| ...+.+.+.++|++|+++ |+.|+++|+|+.....+ .|..+|++. +++-++++.
T Consensus 2 ~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~----g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~-~~~~i~ts~ 70 (248)
T PRK10444 2 KNVICDIDGVLMHDNVAVPGAAEFLHRILDK----GLPLVLLTNYPSQTGQDLANRFATAGVDV-PDSVFYTSA 70 (248)
T ss_pred cEEEEeCCCceEeCCeeCccHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-CHhhEecHH
Confidence 68999999999 457888999999999997 89999999998765544 455678863 355566653
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00018 Score=84.33 Aligned_cols=185 Identities=11% Similarity=0.062 Sum_probs=116.0
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 463 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
...+..+..+.+..+++++.++ .|=-+..++++.++.+.- |+-+|++...+.. -...+.+.+.+.|+
T Consensus 273 ~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~v--P~S~L~L~~~~~~---------~~~~l~~~~~~~Gv 339 (468)
T PF13844_consen 273 VTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAV--PNSRLWLLRFPAS---------GEARLRRRFAAHGV 339 (468)
T ss_dssp EEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHS--TTEEEEEEETSTT---------HHHHHHHHHHHTTS
T ss_pred ccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhC--CCcEEEEeeCCHH---------HHHHHHHHHHHcCC
Confidence 4455667777776666666655 677788999998886444 4444433333221 12567788888888
Q ss_pred C-CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc-----ceee-CCceEEe
Q 001557 543 Y-GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD-----IHRV-LDNGLLV 615 (1054)
Q Consensus 543 ~-~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e-----iv~~-~~~Gllv 615 (1054)
. +++.|.+..+.++-...|+.+ ||+|=|..+- -+.+.+||+.+|+|||+-.-..... ++.. |-.-++.
T Consensus 340 ~~~Ri~f~~~~~~~ehl~~~~~~----DI~LDT~p~n-G~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA 414 (468)
T PF13844_consen 340 DPDRIIFSPVAPREEHLRRYQLA----DICLDTFPYN-GGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA 414 (468)
T ss_dssp -GGGEEEEE---HHHHHHHGGG-----SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-
T ss_pred ChhhEEEcCCCCHHHHHHHhhhC----CEEeeCCCCC-CcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC
Confidence 6 579998888877888888888 9999874333 3789999999999999865322211 1111 1122334
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-h--cCCHHHHHHHHHHHHHHh
Q 001557 616 DPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-H--QFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~--~fsw~~~a~~yl~~l~~~ 667 (1054)
. |.++..+.-.++.+|++.++++++..++.. + .|+-..+++.+.+.|+.+
T Consensus 415 ~--s~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 415 D--SEEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp S--SHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 3 889999988899999999999999998776 3 699999999999998764
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0023 Score=75.28 Aligned_cols=105 Identities=16% Similarity=0.184 Sum_probs=74.1
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cceeeCCceEEeC
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIHRVLDNGLLVD 616 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv~~~~~Gllv~ 616 (1054)
++..++...+++|+. +++..| |++|.. |-..+..||+.+|+|+|+-..+.=. +-++..+.|..+.
T Consensus 281 ~~p~n~~v~~~~p~~---~~l~~a----d~vI~h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~ 349 (406)
T COG1819 281 NVPDNVIVADYVPQL---ELLPRA----DAVIHH----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALP 349 (406)
T ss_pred cCCCceEEecCCCHH---HHhhhc----CEEEec----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecC
Confidence 456688888888766 588899 999976 3345778999999999998876322 2344556787776
Q ss_pred --CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHH
Q 001557 617 --PHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHC 657 (1054)
Q Consensus 617 --p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a 657 (1054)
+.+.+.++++|.++|+|+... +..+..++..+...-.+.+
T Consensus 350 ~~~l~~~~l~~av~~vL~~~~~~-~~~~~~~~~~~~~~g~~~~ 391 (406)
T COG1819 350 FEELTEERLRAAVNEVLADDSYR-RAAERLAEEFKEEDGPAKA 391 (406)
T ss_pred cccCCHHHHHHHHHHHhcCHHHH-HHHHHHHHHhhhcccHHHH
Confidence 689999999999999987644 3444444454333333333
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.099 Score=63.12 Aligned_cols=140 Identities=16% Similarity=0.176 Sum_probs=76.7
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 474 RKPMILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 474 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
+..+.+++|.... .+.+..++++++.+. .++.++++......... ..+-..+.+... ...+...++
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~~-----~~flw~~~~~~~~~~~~---~~lp~~~~~r~~----~~g~~v~~w 352 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGSG-----QNFIWVVRKNENQGEKE---EWLPEGFEERTK----GKGLIIRGW 352 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHCC-----CCEEEEEecCCcccchh---hcCCHHHHHHhc----cCCEEEecC
Confidence 4466788887643 345666666666552 35555666422110000 000011111111 245777889
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccce-----eeCCceEEe--------C--
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIH-----RVLDNGLLV--------D-- 616 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv-----~~~~~Gllv--------~-- 616 (1054)
+|+. .++..++ .++||.= -| -.+++||+++|+|+|+-...+=.-.- +...-|+-+ +
T Consensus 353 ~PQ~---~iL~h~~--v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~ 423 (482)
T PLN03007 353 APQV---LILDHQA--TGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGD 423 (482)
T ss_pred CCHH---HHhccCc--cceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccC
Confidence 8875 5666651 0235421 23 35889999999999998864322211 111234333 1
Q ss_pred CCCHHHHHHHHHHHHhCH
Q 001557 617 PHDQQSIADALLKLVSDK 634 (1054)
Q Consensus 617 p~d~~~la~aI~~ll~d~ 634 (1054)
.-+.++++++|++++.++
T Consensus 424 ~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 424 FISREKVEKAVREVIVGE 441 (482)
T ss_pred cccHHHHHHHHHHHhcCc
Confidence 237889999999999875
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.085 Score=62.81 Aligned_cols=111 Identities=14% Similarity=0.099 Sum_probs=66.7
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cc-eeeCCceEEeCC--
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DI-HRVLDNGLLVDP-- 617 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----ei-v~~~~~Gllv~p-- 617 (1054)
.+.+.++.|+.+ +++..+ .++|| + -+--.+++||+++|+|+|+-..-+=. .+ +...+-|+.++.
T Consensus 312 g~~v~~W~PQ~~---iL~H~~--v~~Fv--t--HcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 382 (442)
T PLN02208 312 GVVWGGWVQQPL---ILDHPS--IGCFV--N--HCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK 382 (442)
T ss_pred CcEeeccCCHHH---HhcCCc--cCeEE--c--cCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence 455678888875 444441 13444 2 12236889999999999998753321 22 222355777753
Q ss_pred ---CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHH----hcCCHHHHHHHHHHHH
Q 001557 618 ---HDQQSIADALLKLVSDK-QLWERCRQNGLKNI----HQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 618 ---~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~v----~~fsw~~~a~~yl~~l 664 (1054)
-+.++++.+|.++++++ ++.+++++++.+.- +.-|-....++|++.+
T Consensus 383 ~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~~gsS~~~l~~~v~~l 437 (442)
T PLN02208 383 TGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVSPGLLTGYVDKFVEEL 437 (442)
T ss_pred CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 37789999999999865 34556666665443 2223333444554444
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00013 Score=79.97 Aligned_cols=74 Identities=15% Similarity=-0.018 Sum_probs=59.4
Q ss_pred cCCCEEEEEEecCCC---Chhh---HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCC
Q 001557 766 RRRKYVFVIAADCDT---TSDF---LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSG 839 (1054)
Q Consensus 766 ~~~kkLiv~DiDGTL---~~~i---~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nG 839 (1054)
....|+|+||+|||| +..+ .+.+.++|++|+++ |+.++|+|+.+...+...++.+|+. .-||. |+++|
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkek----GikLaIvTNg~Re~v~~~Le~lgL~-~yFDv-II~~g 198 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKER----GCVLVLWSYGNREHVVHSLKETKLE-GYFDI-IICGG 198 (303)
T ss_pred eeeccEEEEecCCCccCCCCccccCChhHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHHcCCC-ccccE-EEECC
Confidence 456799999999999 3445 68999999999997 9999999988888889999999995 23454 55577
Q ss_pred cEEEcC
Q 001557 840 SELYYP 845 (1054)
Q Consensus 840 a~I~~~ 845 (1054)
......
T Consensus 199 ~i~~k~ 204 (303)
T PHA03398 199 RKAGEY 204 (303)
T ss_pred Cccccc
Confidence 766544
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.16 Score=60.93 Aligned_cols=185 Identities=12% Similarity=0.103 Sum_probs=100.3
Q ss_pred hHHHhhhcCCC--CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHH
Q 001557 463 WSEIMHFFSNP--RKPMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 538 (1054)
Q Consensus 463 ~~~~~~~~~~~--~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~ 538 (1054)
|.....++... ..-+.+++|.+. ..+-+..+..+++.+. . .+..++....... ......+-..+..
T Consensus 265 ~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~----~-~FlWv~r~~~~~~--~~~~~~lp~~f~~--- 334 (472)
T PLN02670 265 WVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSE----T-PFFWVLRNEPGTT--QNALEMLPDGFEE--- 334 (472)
T ss_pred hHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCcccc--cchhhcCChHHHH---
Confidence 34455555332 345667778764 3345666777777663 1 4434554211100 0000000011111
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cceeeCCceEE
Q 001557 539 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIHRVLDNGLL 614 (1054)
Q Consensus 539 ~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv~~~~~Gll 614 (1054)
+..-. -+.+.++.|+.+ ++...+ .++||. -+--.+++||+++|+|+|+-...+=. ..+...+.|+.
T Consensus 335 ~~~~r-G~vv~~W~PQ~~---IL~H~~--v~~Fvt----HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~ 404 (472)
T PLN02670 335 RVKGR-GMIHVGWVPQVK---ILSHES--VGGFLT----HCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLE 404 (472)
T ss_pred hccCC-CeEEeCcCCHHH---HhcCcc--cceeee----cCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEE
Confidence 11111 255678888775 444441 133552 12346889999999999998754321 22233467877
Q ss_pred eCC------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH----hcCCHHHHHHHHHHHHHHhh
Q 001557 615 VDP------HDQQSIADALLKLVSDKQLWERCRQNGLKNI----HQFSWPEHCKSYLSRISSCK 668 (1054)
Q Consensus 615 v~p------~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v----~~fsw~~~a~~yl~~l~~~~ 668 (1054)
++. -+.+++.++|++++.+++ -.++++++++.. ..=.-.+.++.+++.+.+..
T Consensus 405 l~~~~~~~~~~~e~i~~av~~vm~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 405 VPRDERDGSFTSDSVAESVRLAMVDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR 467 (472)
T ss_pred eeccccCCcCcHHHHHHHHHHHhcCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence 753 358999999999998642 234555555443 24466667777777666543
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.31 Score=57.71 Aligned_cols=89 Identities=9% Similarity=0.095 Sum_probs=57.7
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc----cCcccceeeCCceEEeC--CCCHHH
Q 001557 549 PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN----GGPVDIHRVLDNGLLVD--PHDQQS 622 (1054)
Q Consensus 549 ~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~----Gg~~eiv~~~~~Gllv~--p~d~~~ 622 (1054)
....+..++..++..| |++|-.-+ -.++=|+++|+|+|+-.. -++-+.+. -..++++ .-+.++
T Consensus 313 ~~~~~~~e~~~iIs~~----dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg--~~~~~~~~~~l~~~~ 381 (426)
T PRK10017 313 MDELNDLEMGKILGAC----ELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLG--LPEMAIDIRHLLDGS 381 (426)
T ss_pred cCCCChHHHHHHHhhC----CEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcC--CccEEechhhCCHHH
Confidence 3334456888999999 99885432 357889999999998663 12222221 1223343 446788
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH
Q 001557 623 IADALLKLVSDKQLWERCRQNGLKNI 648 (1054)
Q Consensus 623 la~aI~~ll~d~~~~~~~~~~~~~~v 648 (1054)
+.+.+.+++++.+..++.-+......
T Consensus 382 Li~~v~~~~~~r~~~~~~l~~~v~~~ 407 (426)
T PRK10017 382 LQAMVADTLGQLPALNARLAEAVSRE 407 (426)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 99999999998877655444444333
|
|
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00039 Score=72.88 Aligned_cols=183 Identities=13% Similarity=0.077 Sum_probs=95.8
Q ss_pred HHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHH-hCCCCCCCCcEEEEcCCcEEEcCCCCCCCCCCCccccCccchhhh
Q 001557 789 KKVVEAAGKDNSAGFIGFVLSTALTILELHSLLV-SGGLSPLAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHT 867 (1054)
Q Consensus 789 ~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~-~l~l~~~~~d~lI~~nGa~I~~~~~~~~~~~~~~~~~d~~~~~~i 867 (1054)
.++|.+|++ .+.|+++||-.+.-+.+-+. .--+ ..+|++-+.||+..|..+ ... |...+
T Consensus 2 ~~~L~~L~~-----~~~vgvVgGsd~~k~~eQl~~~~~~--~~fdy~f~enG~~~y~~~---------~~~----~~~~~ 61 (220)
T PF03332_consen 2 AELLQKLRK-----KVPVGVVGGSDLPKIQEQLGGDDVL--DNFDYVFPENGLVAYKNG---------ELI----WSQSI 61 (220)
T ss_dssp HHHHHHHHT-----TSEEEEEESS-HHHHHHHHSTTTHH--HH-SEEEEGGGTEEEETT---------EEE----EE--H
T ss_pred HHHHHHHHh-----cCeEEEEcchhHHHHHHHHcccchH--hhCCeeecCCCCeEEECC---------Cch----hhHhH
Confidence 567888886 58999999999988776663 2112 357899999999999764 222 22222
Q ss_pred ccccChhhHHHHHHH----hhhhccCCCCccCcccccccccCcceEEEEEe--cCCCCC-----------c-cHHHHHHH
Q 001557 868 EYRWGGEGLRKTLVR----WAASVNDKKGEEGKIVEEDESRSTIHCYAFEV--TNPQMI-----------P-PVKELRKL 929 (1054)
Q Consensus 868 ~~~w~~e~l~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~--~~~~~~-----------~-~~~el~~~ 929 (1054)
......+.+++++.- +.......+ .-.++|.. .-.+.|.- ++.... . .-+.+.+.
T Consensus 62 ~~~lgee~~~~~in~~l~~~~~l~lp~k---rGtfIE~R----~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~ 134 (220)
T PF03332_consen 62 AEFLGEEKLQKLINFCLRYISDLDLPVK---RGTFIEFR----GGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEA 134 (220)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT---S------S-SEEEE----SSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHHHHHHHhCCCCcc---CCCceeec----CCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHH
Confidence 222222333333321 111111111 01112211 11222221 111000 0 01234455
Q ss_pred HHHhcCeEEEEEe-eCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCc----CCCccccccccCc-ceEEEecCc
Q 001557 930 MRIQALRCHVIYC-QNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE----CGDTDYEGLLGGV-HKTVILKGV 1003 (1054)
Q Consensus 930 l~~~~~~~~v~~s-~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD----~~d~D~~eML~~a-g~gVaMgNa 1003 (1054)
|+.....+.+.++ ++...+||.|+|.+|..+|++|.+.. .+ .|.|+|| +|| | .+.+... -.|+.|.+=
T Consensus 135 L~~~f~d~~L~~siGGqiSiDvfp~GwDKty~Lr~l~~~~---~~-~I~FfGDkt~pGGN-D-yei~~~~rt~g~~V~~p 208 (220)
T PF03332_consen 135 LKKEFPDFGLTFSIGGQISIDVFPKGWDKTYCLRHLEDEG---FD-EIHFFGDKTFPGGN-D-YEIFEDPRTIGHTVTSP 208 (220)
T ss_dssp HHHHTCCCSEEEEEETTTEEEEEETT-SGGGGGGGTTTTT----S-EEEEEESS-STTST-T-HHHHHSTTSEEEE-SSH
T ss_pred HHHHCCCCceEEecCCceEEccccCCccHHHHHHHHHhcc---cc-eEEEEehhccCCCC-C-ceeeecCCccEEEeCCH
Confidence 5656565555444 44568999999999999999997743 33 5566887 578 8 7777654 357777643
Q ss_pred c
Q 001557 1004 G 1004 (1054)
Q Consensus 1004 ~ 1004 (1054)
.
T Consensus 209 ~ 209 (220)
T PF03332_consen 209 E 209 (220)
T ss_dssp H
T ss_pred H
Confidence 3
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.22 Score=59.49 Aligned_cols=137 Identities=12% Similarity=0.117 Sum_probs=80.3
Q ss_pred CcEEEEEeCCC---CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 475 KPMILALARPD---PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 475 ~~~Il~vgRld---~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
..+++++|... +.+-+..++.+++.+. . .+.+++..... ..+.. ...++. .+++.+.++
T Consensus 274 svvyvsfGS~~~~~~~~~~~~l~~~l~~~g----~-~fiW~~~~~~~-~~l~~----------~~~~~~--~~~~~v~~w 335 (448)
T PLN02562 274 SVIYISFGSWVSPIGESNVRTLALALEASG----R-PFIWVLNPVWR-EGLPP----------GYVERV--SKQGKVVSW 335 (448)
T ss_pred ceEEEEecccccCCCHHHHHHHHHHHHHCC----C-CEEEEEcCCch-hhCCH----------HHHHHh--ccCEEEEec
Confidence 45778888853 4455777778877763 1 34344443210 01110 111111 246677788
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cceee-CCceEEeCCCCHHHHHHH
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIHRV-LDNGLLVDPHDQQSIADA 626 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv~~-~~~Gllv~p~d~~~la~a 626 (1054)
+|+.+ ++...+ .++||. -+--.+.+||+.+|+|+|+-...+=. ..+.+ ...|+-+..-+.++++++
T Consensus 336 ~PQ~~---iL~h~~--v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~~ 406 (448)
T PLN02562 336 APQLE---VLKHQA--VGCYLT----HCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEEG 406 (448)
T ss_pred CCHHH---HhCCCc--cceEEe----cCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHHH
Confidence 88774 454440 034442 12246889999999999998754322 12221 245676655688999999
Q ss_pred HHHHHhCHHHHH
Q 001557 627 LLKLVSDKQLWE 638 (1054)
Q Consensus 627 I~~ll~d~~~~~ 638 (1054)
|++++.+++.++
T Consensus 407 v~~~l~~~~~r~ 418 (448)
T PLN02562 407 LRKVMEDSGMGE 418 (448)
T ss_pred HHHHhCCHHHHH
Confidence 999998865433
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.025 Score=65.33 Aligned_cols=145 Identities=19% Similarity=0.275 Sum_probs=89.0
Q ss_pred CCCCCcEEEEE--eCCCC-CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEE
Q 001557 471 SNPRKPMILAL--ARPDP-KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVA 547 (1054)
Q Consensus 471 ~~~~~~~Il~v--gRld~-~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~ 547 (1054)
.++++++|..+ +|-.+ ++.++.+++++..+.+ ..+++.+++...+.. ....+.......+....+.
T Consensus 180 l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~--~~p~l~fvvp~a~~~---------~~~~i~~~~~~~~~~~~~~ 248 (373)
T PF02684_consen 180 LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKK--QRPDLQFVVPVAPEV---------HEELIEEILAEYPPDVSIV 248 (373)
T ss_pred CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEecCCHH---------HHHHHHHHHHhhCCCCeEE
Confidence 45677765444 34443 4566889999999964 446677666544321 1222444444444322232
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc-cc----------------CcccceeeCC
Q 001557 548 YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-NG----------------GPVDIHRVLD 610 (1054)
Q Consensus 548 ~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~-~G----------------g~~eiv~~~~ 610 (1054)
.. ..+-.+.++.| |+.+..| |.+.+|++.+|+|.|..- .. +.+.|+.+..
T Consensus 249 ~~----~~~~~~~m~~a----d~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 249 II----EGESYDAMAAA----DAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred Ec----CCchHHHHHhC----cchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 22 34677899999 9999877 999999999999987643 22 2222221100
Q ss_pred --ceEEeCCCCHHHHHHHHHHHHhCHHHHHH
Q 001557 611 --NGLLVDPHDQQSIADALLKLVSDKQLWER 639 (1054)
Q Consensus 611 --~Gllv~p~d~~~la~aI~~ll~d~~~~~~ 639 (1054)
.=++=+.-+++.++.++..++.|++.++.
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~ 346 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELLENPEKRKK 346 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHhcCHHHHHH
Confidence 01222345899999999999999876443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.35 Score=57.77 Aligned_cols=92 Identities=17% Similarity=0.268 Sum_probs=56.9
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cceeeC-CceEEe-CC
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIHRVL-DNGLLV-DP 617 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv~~~-~~Gllv-~p 617 (1054)
++....+++|+.+ ++...+ .++||.= -|+ .+++||+++|+|+|+-...+=. ..+.+. +.|+.+ ..
T Consensus 324 ~~g~v~~w~PQ~~---iL~h~~--v~~fvtH---~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 394 (451)
T PLN02410 324 GRGYIVKWAPQKE---VLSHPA--VGGFWSH---CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD 394 (451)
T ss_pred CCeEEEccCCHHH---HhCCCc--cCeeeec---Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence 4556668988875 444431 1456632 233 5788999999999998754322 122111 456666 34
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001557 618 HDQQSIADALLKLVSDKQLWERCRQNGL 645 (1054)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~ 645 (1054)
-+.++++++|++++.+++ .++++++++
T Consensus 395 ~~~~~v~~av~~lm~~~~-~~~~r~~a~ 421 (451)
T PLN02410 395 LDRGAVERAVKRLMVEEE-GEEMRKRAI 421 (451)
T ss_pred ccHHHHHHHHHHHHcCCc-HHHHHHHHH
Confidence 478899999999998753 233444433
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.015 Score=68.52 Aligned_cols=180 Identities=13% Similarity=0.092 Sum_probs=121.9
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCC-CCEEe
Q 001557 470 FSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY-GQVAY 548 (1054)
Q Consensus 470 ~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~-~~V~~ 548 (1054)
+.+++..+++++ -.+.|-.+.+++-+-++.+.-|+.-+ ++.|++++ .++...+++++++.|+. .++.|
T Consensus 425 glp~~avVf~c~--~n~~K~~pev~~~wmqIL~~vP~Svl-~L~~~~~~--------~~~~~~l~~la~~~Gv~~eRL~f 493 (620)
T COG3914 425 GLPEDAVVFCCF--NNYFKITPEVFALWMQILSAVPNSVL-LLKAGGDD--------AEINARLRDLAEREGVDSERLRF 493 (620)
T ss_pred CCCCCeEEEEec--CCcccCCHHHHHHHHHHHHhCCCcEE-EEecCCCc--------HHHHHHHHHHHHHcCCChhheee
Confidence 334444333443 45577777777777776543343333 45566543 56789999999999975 57999
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc-------ccCcccceee-CCceEEeCCCCH
Q 001557 549 PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-------NGGPVDIHRV-LDNGLLVDPHDQ 620 (1054)
Q Consensus 549 ~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~-------~Gg~~eiv~~-~~~Gllv~p~d~ 620 (1054)
.+..+.++-.+.|..| |+++=+-- -|-..|.+|++.+|+|||+-- +|+. |+.. |..-++++ +.
T Consensus 494 ~p~~~~~~h~a~~~iA----DlvLDTyP-Y~g~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~vA~--s~ 564 (620)
T COG3914 494 LPPAPNEDHRARYGIA----DLVLDTYP-YGGHTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELVAD--SR 564 (620)
T ss_pred cCCCCCHHHHHhhchh----heeeeccc-CCCccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhhcC--CH
Confidence 9999999999999999 99986632 233689999999999999732 3331 2221 12223343 55
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHH-h--cCCHHHHHHHHHHHHHHhhh
Q 001557 621 QSIADALLKLVSDKQLWERCRQNGLKNI-H--QFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v-~--~fsw~~~a~~yl~~l~~~~~ 669 (1054)
++..+.-..+-.|...+++.+....+.. . .|+....++++.++|..+-.
T Consensus 565 ~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~ 616 (620)
T COG3914 565 ADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWS 616 (620)
T ss_pred HHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHH
Confidence 5555444445557777777777766666 3 69999999999999987754
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.21 Score=55.98 Aligned_cols=336 Identities=17% Similarity=0.165 Sum_probs=167.3
Q ss_pred ceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcC-CCceEEEEEecCcCCCCCCCccCCcccccccccccc
Q 001557 165 KLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSM-PGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTEN 243 (1054)
Q Consensus 165 ~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~-~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~ 243 (1054)
.+||++.|.|.+ |- |.-+....+|.+|.+. .| .+|.++|.....+...
T Consensus 9 ~~Ri~~Yshd~~--------Gl-----GHlrR~~~Ia~aLv~d~~~-~~Il~IsG~~~~~~F~----------------- 57 (400)
T COG4671 9 RPRILFYSHDLL--------GL-----GHLRRALRIAHALVEDYLG-FDILIISGGPPAGGFP----------------- 57 (400)
T ss_pred cceEEEEehhhc--------cc-----hHHHHHHHHHHHHhhcccC-ceEEEEeCCCccCCCC-----------------
Confidence 469999996533 32 8889999999999987 45 7999999753211111
Q ss_pred cccccCCCCCeEEEEccCCCCC---cccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHH
Q 001557 244 LMQGLGESSGAYIIRIPFGPKD---KYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDA 320 (1054)
Q Consensus 244 ~~~~~~~~~g~~i~rip~g~~~---~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~ 320 (1054)
...|+..+.+|+-.+. .|-.. .+-.-+.++.. +-.++ +... .+.++|||+.+...+.|.-
T Consensus 58 ------~~~gVd~V~LPsl~k~~~G~~~~~-d~~~~l~e~~~----~Rs~l---il~t---~~~fkPDi~IVd~~P~Glr 120 (400)
T COG4671 58 ------GPAGVDFVKLPSLIKGDNGEYGLV-DLDGDLEETKK----LRSQL---ILST---AETFKPDIFIVDKFPFGLR 120 (400)
T ss_pred ------CcccCceEecCceEecCCCceeee-ecCCCHHHHHH----HHHHH---HHHH---HHhcCCCEEEEeccccchh
Confidence 1248888888873221 11111 11111333322 11111 1111 1237899999987665532
Q ss_pred H------HHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHh
Q 001557 321 A------ALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR 394 (1054)
Q Consensus 321 a------~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~ 394 (1054)
. .++ +..+.+.|.-..++-..- . ...+-.++-..++.+-++-|.|.+...........
T Consensus 121 ~EL~ptL~yl-~~~~t~~vL~lr~i~D~p-~--------------~~~~~w~~~~~~~~I~r~yD~V~v~GdP~f~d~~~ 184 (400)
T COG4671 121 FELLPTLEYL-KTTGTRLVLGLRSIRDIP-Q--------------ELEADWRRAETVRLINRFYDLVLVYGDPDFYDPLT 184 (400)
T ss_pred hhhhHHHHHH-hhcCCcceeehHhhhhch-h--------------hhccchhhhHHHHHHHHhheEEEEecCccccChhh
Confidence 1 122 223455666555541100 0 00011122223344566788998876544433333
Q ss_pred hhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCC
Q 001557 395 LYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPR 474 (1054)
Q Consensus 395 ~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1054)
.|+-. +. + +-.+.+.|.= ..-.+.. ..|..+. +..
T Consensus 185 ~~~~~-~~----i----------------~~k~~ytG~v-q~~~~~~----------------~~p~~~~-------pE~ 219 (400)
T COG4671 185 EFPFA-PA----I----------------RAKMRYTGFV-QRSLPHL----------------PLPPHEA-------PEG 219 (400)
T ss_pred cCCcc-Hh----h----------------hhheeEeEEe-eccCcCC----------------CCCCcCC-------Ccc
Confidence 33321 11 1 1222233321 0000100 0111110 233
Q ss_pred CcEEEEEeCCC-CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCC
Q 001557 475 KPMILALARPD-PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHK 553 (1054)
Q Consensus 475 ~~~Il~vgRld-~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~ 553 (1054)
..+++++|.-. -..=+.+.++|...+..+.+ +..+|.|.-- + ..+.+++.....-.+.|.+..+
T Consensus 220 ~~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~--~~~ivtGP~M-----P------~~~r~~l~~~A~~~p~i~I~~f-- 284 (400)
T COG4671 220 FDILVSVGGGADGAELIETALAAAQLLAGLNH--KWLIVTGPFM-----P------EAQRQKLLASAPKRPHISIFEF-- 284 (400)
T ss_pred ceEEEecCCChhhHHHHHHHHHHhhhCCCCCc--ceEEEeCCCC-----C------HHHHHHHHHhcccCCCeEEEEh--
Confidence 55667776432 22223444555554432221 3545656532 2 1233344444433467777777
Q ss_pred CCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc--ceeeC---Cce---EEe-CCCCHHHHH
Q 001557 554 QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD--IHRVL---DNG---LLV-DPHDQQSIA 624 (1054)
Q Consensus 554 ~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e--iv~~~---~~G---llv-~p~d~~~la 624 (1054)
.+++..|+..| +..|.- -|+ .|.+|-+.+|+|-+.-..+.+.+ +++.. .-| .+. +.-.++.+|
T Consensus 285 ~~~~~~ll~gA----~~vVSm---~GY-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La 356 (400)
T COG4671 285 RNDFESLLAGA----RLVVSM---GGY-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLA 356 (400)
T ss_pred hhhHHHHHHhh----heeeec---ccc-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHH
Confidence 68999999999 887743 244 46779999999987776554443 22110 012 121 222466777
Q ss_pred HHHHHHHh
Q 001557 625 DALLKLVS 632 (1054)
Q Consensus 625 ~aI~~ll~ 632 (1054)
++|..+++
T Consensus 357 ~al~~~l~ 364 (400)
T COG4671 357 DALKAALA 364 (400)
T ss_pred HHHHhccc
Confidence 77777776
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.86 Score=54.38 Aligned_cols=94 Identities=16% Similarity=0.148 Sum_probs=58.3
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cceee-CCceEEeCC-
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIHRV-LDNGLLVDP- 617 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv~~-~~~Gllv~p- 617 (1054)
.++.+.++.|+.+ ++...+ .++||. -+-..+++||+++|+|+|+-...+=. ..+.+ -..|+-+..
T Consensus 317 ~~~~i~~W~PQ~~---iL~H~~--v~~Fvt----HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~ 387 (449)
T PLN02173 317 DKSLVLKWSPQLQ---VLSNKA--IGCFMT----HCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE 387 (449)
T ss_pred CceEEeCCCCHHH---HhCCCc--cceEEe----cCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence 4577779988764 555541 135552 23357899999999999998754322 12222 145666532
Q ss_pred -----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001557 618 -----HDQQSIADALLKLVSDKQLWERCRQNGLKN 647 (1054)
Q Consensus 618 -----~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 647 (1054)
-+.+++++++++++.+++ .+++++++.+.
T Consensus 388 ~~~~~~~~e~v~~av~~vm~~~~-~~~~r~~a~~~ 421 (449)
T PLN02173 388 KESGIAKREEIEFSIKEVMEGEK-SKEMKENAGKW 421 (449)
T ss_pred ccCCcccHHHHHHHHHHHhcCCh-HHHHHHHHHHH
Confidence 167999999999997643 24444444433
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.09 E-value=1.2 Score=53.76 Aligned_cols=170 Identities=13% Similarity=0.123 Sum_probs=88.0
Q ss_pred CcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001557 475 KPMILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH 552 (1054)
Q Consensus 475 ~~~Il~vgRld~--~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 552 (1054)
..+.+++|.+.. .+-+..++.+++... ..+.++++...+.... .......+.+... ...+.+.+++
T Consensus 284 svVyvsfGS~~~~~~~~~~ela~gL~~~~-----~~flw~~~~~~~~~~~---~~~lp~~~~~r~~----~~g~~v~~w~ 351 (477)
T PLN02863 284 KVVYVCFGSQVVLTKEQMEALASGLEKSG-----VHFIWCVKEPVNEESD---YSNIPSGFEDRVA----GRGLVIRGWA 351 (477)
T ss_pred ceEEEEeeceecCCHHHHHHHHHHHHhCC-----CcEEEEECCCcccccc---hhhCCHHHHHHhc----cCCEEecCCC
Confidence 446677787642 233666777776552 3454566532211000 0001111222211 2347777898
Q ss_pred CCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc----c-eeeCCceEEeC-----CCCHHH
Q 001557 553 KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD----I-HRVLDNGLLVD-----PHDQQS 622 (1054)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e----i-v~~~~~Gllv~-----p~d~~~ 622 (1054)
|+. .++...+ .++||.= -| -.+.+||+++|+|+|+-...+=.- . ++..+.|+.+. ..+.++
T Consensus 352 PQ~---~vL~h~~--v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~ 422 (477)
T PLN02863 352 PQV---AILSHRA--VGAFLTH---CG-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDE 422 (477)
T ss_pred CHH---HHhcCCC--cCeEEec---CC-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHH
Confidence 875 4555420 1566632 23 357889999999999987543221 1 22235676662 236789
Q ss_pred HHHHHHHHHh-CHHH---HHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 623 IADALLKLVS-DKQL---WERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 623 la~aI~~ll~-d~~~---~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
+++++.+++. +++. .+++++.+++.+ +.=|-.+-.++|++.+.
T Consensus 423 v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~ 470 (477)
T PLN02863 423 LARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVV 470 (477)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence 9999999884 3322 223333334444 22233344455655554
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.6 Score=55.71 Aligned_cols=93 Identities=15% Similarity=0.133 Sum_probs=59.8
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cce-eeCCceEEeCC---
Q 001557 546 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIH-RVLDNGLLVDP--- 617 (1054)
Q Consensus 546 V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv-~~~~~Gllv~p--- 617 (1054)
..+.+++|+.+ +++.++ .++||.= +-..+++||+++|+|+|+-...+=. ..+ +....|+.+..
T Consensus 314 ~vv~~w~PQ~~---vL~h~~--v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~ 384 (446)
T PLN00414 314 IVWEGWVEQPL---ILSHPS--VGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDS 384 (446)
T ss_pred eEEeccCCHHH---HhcCCc--cceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccC
Confidence 44567888775 444431 1456632 3347889999999999998754322 222 23456776642
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001557 618 --HDQQSIADALLKLVSDK-QLWERCRQNGLKN 647 (1054)
Q Consensus 618 --~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 647 (1054)
-+.+++++++++++.++ +..+++++++++.
T Consensus 385 ~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 385 GWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKL 417 (446)
T ss_pred CccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH
Confidence 47899999999999864 4455666666654
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.045 Score=62.23 Aligned_cols=151 Identities=14% Similarity=0.118 Sum_probs=87.6
Q ss_pred HhhhcCCCCCcEEEE-Ee-CCCC-CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 466 IMHFFSNPRKPMILA-LA-RPDP-KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 466 ~~~~~~~~~~~~Il~-vg-Rld~-~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
+..+..+.+++++.. .| |-.. .+.++.+++|++++.. ..+++.+++--.... +...+....+....
T Consensus 179 r~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~--~~~~~~~vlp~~~~~---------~~~~~~~~~~~~~~ 247 (381)
T COG0763 179 REKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKA--RYPDLKFVLPLVNAK---------YRRIIEEALKWEVA 247 (381)
T ss_pred HHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHh--hCCCceEEEecCcHH---------HHHHHHHHhhcccc
Confidence 444555566665443 34 3332 4567788899999864 445666666544321 11112222222221
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc-c----------------cCcccc
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-N----------------GGPVDI 605 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~-~----------------Gg~~ei 605 (1054)
...+.+ ...+-.+.|..| |+.+..| |.+.+|++.+|+|+|++= . -+.+.|
T Consensus 248 ~~~~~~----~~~~~~~a~~~a----D~al~aS-----GT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNI 314 (381)
T COG0763 248 GLSLIL----IDGEKRKAFAAA----DAALAAS-----GTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNI 314 (381)
T ss_pred CceEEe----cCchHHHHHHHh----hHHHHhc-----cHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHH
Confidence 112222 234677899999 9988776 999999999999987753 2 233333
Q ss_pred eeeCCceEEe-----CCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001557 606 HRVLDNGLLV-----DPHDQQSIADALLKLVSDKQLWERCRQN 643 (1054)
Q Consensus 606 v~~~~~Gllv-----~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1054)
+.+ -.+| ..-.++.|+.++..++.|...++++.+.
T Consensus 315 i~~---~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~ 354 (381)
T COG0763 315 LAG---REIVPELIQEDCTPENLARALEELLLNGDRREALKEK 354 (381)
T ss_pred hcC---CccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHH
Confidence 221 1112 1235889999999999988554444433
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.00055 Score=75.52 Aligned_cols=64 Identities=11% Similarity=-0.014 Sum_probs=51.7
Q ss_pred EEEEEEecCCC--Chh----hHHHHHHHHHHHhccCCCCceEEEEEcCCCHH---HHHHHHHhCCCCCCCCcEEEEcC
Q 001557 770 YVFVIAADCDT--TSD----FLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL---ELHSLLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 770 kLiv~DiDGTL--~~~----i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~---~i~~~l~~l~l~~~~~d~lI~~n 838 (1054)
|+|+||+|||| ... +.+.+.++|++++++ |+.|+++|||+.. .+...++.+|++. .++-++++.
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~----G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~-~~~~i~ts~ 74 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGA----SVKVRFVTNTTKESKQDLLERLQRLGFDI-SEDEVFTPA 74 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHcCCCC-CHHHeEcHH
Confidence 68999999999 233 788999999999997 9999999987555 5778888899863 456666654
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PF08550 DUF1752: Fungal protein of unknown function (DUF1752); InterPro: IPR013860 This entry represents fungal proteins of unknown function | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.00041 Score=48.80 Aligned_cols=24 Identities=33% Similarity=0.807 Sum_probs=18.0
Q ss_pred HhhcChhhhhhhhhhhhHHHHHhh
Q 001557 63 AATRSPQERNTRLENMCWRIWNLA 86 (1054)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1054)
+.++..-+=..||||++||+|+.+
T Consensus 6 ~~~k~~l~~~~RLeN~sWR~w~~~ 29 (29)
T PF08550_consen 6 TKCKDSLPNGERLENLSWRLWNKN 29 (29)
T ss_pred hhhhhhcCcchhHHHHHHHHHhcC
Confidence 344445555789999999999864
|
This short section domain is bounded by two highly conserved tryptophans. The entry contains P34072 from SWISSPROT that is thought to be a negative regulator of RAS-cAMP pathway in S. cerevisiae and the S. pombe member is a GAF1 transcription factor Q10280 from SWISSPROT that is also associated with the zinc finger family GATA PF00320 from PFAM. |
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.005 Score=76.46 Aligned_cols=148 Identities=15% Similarity=0.128 Sum_probs=107.3
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCchhhhhchHHHHHHHHHHHHHc----
Q 001557 471 SNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY---- 540 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~~~~~~-----~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~---- 540 (1054)
.+|+...++++-|+...|...+ ++..+..+.++...| ..++|.|+....... ....+...|+.+++..
T Consensus 526 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~in~Dp 603 (797)
T cd04300 526 VDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYY--MAKLIIKLINAVADVVNNDP 603 (797)
T ss_pred cCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 4688899999999999998887 666655554333332 355666665432221 2245677777777742
Q ss_pred CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCcccceee--CCceEE
Q 001557 541 DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDNGLL 614 (1054)
Q Consensus 541 ~l~~--~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~--~~~Gll 614 (1054)
.+.+ +|.|+....-+--..++.+| ||-.+.|. .|..|..-+-+|.-|.+.|+|..|+..|+.+. ..|+++
T Consensus 604 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fi 679 (797)
T cd04300 604 DVGDKLKVVFLPNYNVSLAEKIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFI 679 (797)
T ss_pred hcCCceEEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEE
Confidence 2444 68887776655555677777 99999886 79999999999999999999999999999876 789999
Q ss_pred eCCCCHHHHHH
Q 001557 615 VDPHDQQSIAD 625 (1054)
Q Consensus 615 v~p~d~~~la~ 625 (1054)
|- .+.+++.+
T Consensus 680 FG-~~~~ev~~ 689 (797)
T cd04300 680 FG-LTAEEVEA 689 (797)
T ss_pred eC-CCHHHHHH
Confidence 95 35555543
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.037 Score=61.32 Aligned_cols=85 Identities=15% Similarity=0.154 Sum_probs=56.2
Q ss_pred cceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCcc-chHHHHHHhCCC-Chhhhhh-HhHHHHHHHHHHhhhccCCEE
Q 001557 306 WPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGR-DKLEQLLKQGRL-SRDEINT-TYKIMRRIEAEELSLDASEIV 381 (1054)
Q Consensus 306 ~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~-~~~~~l~~~g~~-~~~~i~~-~~~~~~ri~~E~~~l~~ad~V 381 (1054)
+.||+|+... .+|++++..+...|+|+++|-|++.. +....+...... ....+.. ..++++.+ -+.++++||.|
T Consensus 172 ~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l--~~~~Y~~Ad~I 249 (268)
T PF11997_consen 172 KADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESL--SRLAYRAADRI 249 (268)
T ss_pred CCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHH--HHHHHHhhCee
Confidence 4699999875 68899999999999999999999854 333344443332 0111111 11233222 35589999999
Q ss_pred EecCHHHHHHH
Q 001557 382 ITSTRQEIEEQ 392 (1054)
Q Consensus 382 i~~S~~~~~~~ 392 (1054)
++.++.....|
T Consensus 250 ~~l~~~n~~~q 260 (268)
T PF11997_consen 250 TPLYEYNREWQ 260 (268)
T ss_pred cccchhhHHHH
Confidence 99998655444
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=96.84 E-value=1.8 Score=51.95 Aligned_cols=136 Identities=12% Similarity=0.163 Sum_probs=75.7
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 474 RKPMILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 474 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
...+.+++|.... .+-+..+..+++.. ...+.++++.....+. ...+.+... .++..+.++
T Consensus 269 ~svvyvsfGS~~~~~~~~~~e~a~~l~~~-----~~~flw~~~~~~~~~~--------~~~~~~~~~----~~~g~v~~w 331 (456)
T PLN02210 269 SSVVYISFGSMLESLENQVETIAKALKNR-----GVPFLWVIRPKEKAQN--------VQVLQEMVK----EGQGVVLEW 331 (456)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEEeCCccccc--------hhhHHhhcc----CCCeEEEec
Confidence 3457788887643 23345555666544 2355455553211000 111111111 133345588
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc----ceee-CCceEEeC------CCCH
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD----IHRV-LDNGLLVD------PHDQ 620 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e----iv~~-~~~Gllv~------p~d~ 620 (1054)
.|+. .++..++ .++||.= -|+ .+++|++++|+|+|+-...+=.- .+.+ .+.|+.++ .-+.
T Consensus 332 ~PQ~---~iL~h~~--vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 332 SPQE---KILSHMA--ISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred CCHH---HHhcCcC--cCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 8876 4566651 1355522 233 47889999999999987644221 2222 45777774 2378
Q ss_pred HHHHHHHHHHHhCHH
Q 001557 621 QSIADALLKLVSDKQ 635 (1054)
Q Consensus 621 ~~la~aI~~ll~d~~ 635 (1054)
+++++++++++.+++
T Consensus 403 ~~l~~av~~~m~~~~ 417 (456)
T PLN02210 403 EEVERCIEAVTEGPA 417 (456)
T ss_pred HHHHHHHHHHhcCch
Confidence 899999999997643
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=96.81 E-value=1.9 Score=51.87 Aligned_cols=81 Identities=17% Similarity=0.178 Sum_probs=53.6
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc----ce-eeCCceEEeCC--
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD----IH-RVLDNGLLVDP-- 617 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e----iv-~~~~~Gllv~p-- 617 (1054)
.+.+.+++|+.+ ++...+ .+.||. -+-..+++||+.+|+|+|+-...+=.- .+ ...+.|+.++.
T Consensus 339 g~vv~~W~PQ~~---iL~h~~--vg~Fit----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 409 (481)
T PLN02992 339 GFVVPSWAPQAE---ILAHQA--VGGFLT----HCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK 409 (481)
T ss_pred CEEEeecCCHHH---HhCCcc--cCeeEe----cCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC
Confidence 477788988775 444441 023442 233458899999999999988644222 22 23456777743
Q ss_pred --CCHHHHHHHHHHHHhCH
Q 001557 618 --HDQQSIADALLKLVSDK 634 (1054)
Q Consensus 618 --~d~~~la~aI~~ll~d~ 634 (1054)
-+.++++++|.+++.++
T Consensus 410 ~~~~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 410 EVISRSKIEALVRKVMVEE 428 (481)
T ss_pred CcccHHHHHHHHHHHhcCC
Confidence 47889999999999763
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.058 Score=65.30 Aligned_cols=154 Identities=15% Similarity=0.135 Sum_probs=86.7
Q ss_pred HhhhcCCCCCcEEE-EE-eCCCC-CCCHHHHHHHHH--hcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHc
Q 001557 466 IMHFFSNPRKPMIL-AL-ARPDP-KKNITTLVKAFG--ECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY 540 (1054)
Q Consensus 466 ~~~~~~~~~~~~Il-~v-gRld~-~Kgi~~ll~A~~--~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~ 540 (1054)
++++..++++++|. .. +|-.+ ++.++.+++|+. .+. + ++.+++...+.. ....+.+..+..
T Consensus 404 r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~--~l~fvvp~a~~~---------~~~~i~~~~~~~ 469 (608)
T PRK01021 404 KEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---S--THQLLVSSANPK---------YDHLILEVLQQE 469 (608)
T ss_pred HHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---c--CeEEEEecCchh---------hHHHHHHHHhhc
Confidence 34444455666653 33 34433 457788888887 553 2 355555433221 123344444433
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEc-ccc------------------C
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT-KNG------------------G 601 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat-~~G------------------g 601 (1054)
+.. .+.+.. ..+-.+++++| |+.+..| |.+.+|++.+|+|+|.. +.+ +
T Consensus 470 ~~~-~~~ii~---~~~~~~~m~aa----D~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIs 536 (608)
T PRK01021 470 GCL-HSHIVP---SQFRYELMREC----DCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYS 536 (608)
T ss_pred CCC-CeEEec---CcchHHHHHhc----CeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeee
Confidence 211 122221 11246899999 9999887 99999999999998773 222 1
Q ss_pred cccceeeCC-ceEEe---CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001557 602 PVDIHRVLD-NGLLV---DPHDQQSIADALLKLVSDKQLWERCRQNGLKN 647 (1054)
Q Consensus 602 ~~eiv~~~~-~Gllv---~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 647 (1054)
.+.|+.+.. ---++ +.-+++.+++++ +++.|++.++++.+...+.
T Consensus 537 LpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~l 585 (608)
T PRK01021 537 LPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRDL 585 (608)
T ss_pred hhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHHH
Confidence 122221100 01122 234789999996 8888888776666555444
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.80 E-value=1.9 Score=51.56 Aligned_cols=113 Identities=13% Similarity=0.099 Sum_probs=68.0
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cce-eeCCceEEeCC---
Q 001557 546 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIH-RVLDNGLLVDP--- 617 (1054)
Q Consensus 546 V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv-~~~~~Gllv~p--- 617 (1054)
+...+++|+.+| ++..+ .++||.= +-..+++||+++|+|+|+-...+=. ..+ +....|+.+.+
T Consensus 319 ~v~~~W~PQ~~v---L~h~~--v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~ 389 (453)
T PLN02764 319 VVWGGWVQQPLI---LSHPS--VGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREET 389 (453)
T ss_pred cEEeCCCCHHHH---hcCcc--cCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccC
Confidence 556688888754 44430 1456632 3346889999999999998864422 222 22345665532
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHh
Q 001557 618 --HDQQSIADALLKLVSDK-QLWERCRQNGLKNIH----QFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 618 --~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~v~----~fsw~~~a~~yl~~l~~~ 667 (1054)
-+.+++.+++++++.++ ++.+++++++++..+ .=|-....++|++.+.+.
T Consensus 390 ~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~ 446 (453)
T PLN02764 390 GWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQDL 446 (453)
T ss_pred CccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 37899999999999865 445556666655432 223333445555555443
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.18 Score=55.99 Aligned_cols=166 Identities=13% Similarity=0.068 Sum_probs=106.9
Q ss_pred cEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcEEEEE--ecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEE-eCCC
Q 001557 476 PMILALAR-PDPKKNITTLVKAFGECRPLRELANLTLIM--GNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVA-YPKH 551 (1054)
Q Consensus 476 ~~Il~vgR-ld~~Kgi~~ll~A~~~l~~~~~~~~l~LIi--G~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~-~~g~ 551 (1054)
++.+-+|. -|+.-+....|+++.+.. ..++.+++ |-+ .++++|..++.+...++--.+++. +..+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~----~~~v~ii~PlsYp-------~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~ 214 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQF----GDNVKIIVPMGYP-------ANNQAYIEEVRQAGLALFGAENFQILTEK 214 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHh----CCCeEEEEECCcC-------CCCHHHHHHHHHHHHHhcCcccEEehhhh
Confidence 44444554 678888988999987763 24555544 432 234678888888888876434544 5667
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecC-CCCCCcHHHHHHHHcCCCEEEcc-ccCcccceeeCCceEEeCCCCH--HHHHHHH
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPA-FIEPFGLTLIEAAAYGLPIVATK-NGGPVDIHRVLDNGLLVDPHDQ--QSIADAL 627 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps-~~Egfgl~l~EAmA~G~PVIat~-~Gg~~eiv~~~~~Gllv~p~d~--~~la~aI 627 (1054)
++.+|..++++.| |+.++-- +-.|+|..++ .+..|+||+.+. +.-..++.+.+ --++++..+. ..+.++
T Consensus 215 l~f~eYl~lL~~~----Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~g-v~Vlf~~d~L~~~~v~e~- 287 (322)
T PRK02797 215 LPFDDYLALLRQC----DLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQG-LPVLFTGDDLDEDIVREA- 287 (322)
T ss_pred CCHHHHHHHHHhC----CEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCC-CeEEecCCcccHHHHHHH-
Confidence 8999999999999 9998874 5688886554 678899998875 66666664432 3344443322 222211
Q ss_pred HHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001557 628 LKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 628 ~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~ 669 (1054)
.+++...-++.+. |+-+...+.+.++++....
T Consensus 288 ---------~rql~~~dk~~I~-Ff~pn~~~~W~~~l~~~~g 319 (322)
T PRK02797 288 ---------QRQLASVDKNIIA-FFSPNYLQGWRNALAIAAG 319 (322)
T ss_pred ---------HHHHHhhCcceee-ecCHhHHHHHHHHHHHhhC
Confidence 1122222223333 9999999999988886543
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0017 Score=73.73 Aligned_cols=65 Identities=12% Similarity=0.082 Sum_probs=51.3
Q ss_pred CCEEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCC---HHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 768 RKYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT---ILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 768 ~kkLiv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~---~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
..++|+||+|||| ...+.+...++|++++++ |+.|+++|+|+ ...+.+-++.+|++. .++-++++
T Consensus 27 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr~~----g~~~~~~TN~~~~~~~~~~~~l~~lGi~~-~~~~I~ts 96 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDKLIEGVPETLDMLRSM----GKKLVFVTNNSTKSRAQYGKKFESLGLNV-TEEEIFSS 96 (311)
T ss_pred hCCEEEEeCcCCeEeCCccCcCHHHHHHHHHHC----CCEEEEEeCCCCCCHHHHHHHHHHCCCCC-ChhhEeeh
Confidence 3589999999999 456778889999999997 89999999998 555555567888863 45655554
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=2.1 Score=51.63 Aligned_cols=93 Identities=14% Similarity=0.197 Sum_probs=56.5
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc-----ceeeCCceEEeCC---
Q 001557 546 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD-----IHRVLDNGLLVDP--- 617 (1054)
Q Consensus 546 V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e-----iv~~~~~Gllv~p--- 617 (1054)
+.+.++.|+. .++...+ .++||.= -|+ .+++||+++|+|+|+-..-+=.- +++..+.|+.++.
T Consensus 341 ~~v~~w~PQ~---~iL~h~~--vg~fvtH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~ 411 (480)
T PLN00164 341 LVWPTWAPQK---EILAHAA--VGGFVTH---CGW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRK 411 (480)
T ss_pred eEEeecCCHH---HHhcCcc--cCeEEee---ccc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccc
Confidence 5566788776 4555541 1344421 233 47889999999999977533211 2223356776642
Q ss_pred ----CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHH
Q 001557 618 ----HDQQSIADALLKLVSDKQ-LWERCRQNGLKN 647 (1054)
Q Consensus 618 ----~d~~~la~aI~~ll~d~~-~~~~~~~~~~~~ 647 (1054)
-+.++++++|.+++.+++ +.+++++++.+.
T Consensus 412 ~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~ 446 (480)
T PLN00164 412 RDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEM 446 (480)
T ss_pred cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 267999999999998643 244444444433
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.017 Score=59.23 Aligned_cols=146 Identities=16% Similarity=0.186 Sum_probs=73.9
Q ss_pred CCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcC-CCchHHHHHHHccC-C
Q 001557 252 SGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHY-ADAGDAAALLSGAL-N 329 (1054)
Q Consensus 252 ~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~-~~a~~~a~~l~~~~-~ 329 (1054)
+|+++++....+. ......+++..|-..+++- ....+++.++... .+.||||.+|. |-.++ .+.... +
T Consensus 19 ~GV~~~~y~~~~~----~~~~~~~~~~~~e~~~~rg-~av~~a~~~L~~~--Gf~PDvI~~H~GWGe~L---flkdv~P~ 88 (171)
T PF12000_consen 19 PGVRVVRYRPPRG----PTPGTHPYVRDFEAAVLRG-QAVARAARQLRAQ--GFVPDVIIAHPGWGETL---FLKDVFPD 88 (171)
T ss_pred CCcEEEEeCCCCC----CCCCCCcccccHHHHHHHH-HHHHHHHHHHHHc--CCCCCEEEEcCCcchhh---hHHHhCCC
Confidence 4888888765322 2334556666664443332 2233333333333 37799999997 43222 233333 7
Q ss_pred CCEEEEeC----CCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 330 VPMVFTGH----SLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 330 iP~V~t~H----~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
+|+|..+- .-+.+.- + ...+. .......++..+=..-...+..||..++.|....+ .|+..-
T Consensus 89 a~li~Y~E~~y~~~g~d~~--F--Dpe~p-~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~----~fP~~~----- 154 (171)
T PF12000_consen 89 APLIGYFEFYYRASGADVG--F--DPEFP-PSLDDRARLRMRNAHNLLALEQADAGISPTRWQRS----QFPAEF----- 154 (171)
T ss_pred CcEEEEEEEEecCCCCcCC--C--CCCCC-CCHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHH----hCCHHH-----
Confidence 88875432 2111100 0 00000 00111111111111234578899999999986544 343211
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCc
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHI 437 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f 437 (1054)
.+|+.||+-|||++.+
T Consensus 155 ----------------r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 155 ----------------RSKISVIHDGIDTDRF 170 (171)
T ss_pred ----------------HcCcEEeecccchhhc
Confidence 1289999999999865
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.72 E-value=2.3 Score=51.45 Aligned_cols=83 Identities=14% Similarity=0.118 Sum_probs=51.9
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc-----cceeeCCceEEeC--
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV-----DIHRVLDNGLLVD-- 616 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~-----eiv~~~~~Gllv~-- 616 (1054)
+++.+.++.|+.+ +++..+ .++||. .-| -.+++||+.+|+|+|+-...+=. .+++..+.|+.++
T Consensus 342 ~~g~v~~W~PQ~~---iL~H~~--v~~Fvt---H~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~ 412 (481)
T PLN02554 342 DIGKVIGWAPQVA---VLAKPA--IGGFVT---HCG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKY 412 (481)
T ss_pred cCceEEeeCCHHH---HhCCcc--cCcccc---cCc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecc
Confidence 4555668888764 442220 145552 123 35889999999999998754321 2233335576663
Q ss_pred -----------CCCHHHHHHHHHHHHh-CHH
Q 001557 617 -----------PHDQQSIADALLKLVS-DKQ 635 (1054)
Q Consensus 617 -----------p~d~~~la~aI~~ll~-d~~ 635 (1054)
.-+.++++++|++++. ++.
T Consensus 413 ~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~ 443 (481)
T PLN02554 413 WRGDLLAGEMETVTAEEIERGIRCLMEQDSD 443 (481)
T ss_pred ccccccccccCeEcHHHHHHHHHHHhcCCHH
Confidence 1268899999999996 543
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.059 Score=58.41 Aligned_cols=93 Identities=29% Similarity=0.523 Sum_probs=63.5
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001557 473 PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH 552 (1054)
Q Consensus 473 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 552 (1054)
+.+-+++++|.-|+ ||+. ++.+..+.+ ...|+.+|+|...+. ...+++.+.++ +++.++-.
T Consensus 157 ~~r~ilI~lGGsDp-k~lt--~kvl~~L~~--~~~nl~iV~gs~~p~----------l~~l~k~~~~~---~~i~~~~~- 217 (318)
T COG3980 157 PKRDILITLGGSDP-KNLT--LKVLAELEQ--KNVNLHIVVGSSNPT----------LKNLRKRAEKY---PNINLYID- 217 (318)
T ss_pred chheEEEEccCCCh-hhhH--HHHHHHhhc--cCeeEEEEecCCCcc----------hhHHHHHHhhC---CCeeeEec-
Confidence 34557888898777 5544 444555532 225777888865431 34455555554 56665554
Q ss_pred CCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCE
Q 001557 553 KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPI 594 (1054)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PV 594 (1054)
.++++.|+..| |++|..+ |.++.||...|+|.
T Consensus 218 -~~dma~LMke~----d~aI~Aa-----GstlyEa~~lgvP~ 249 (318)
T COG3980 218 -TNDMAELMKEA----DLAISAA-----GSTLYEALLLGVPS 249 (318)
T ss_pred -chhHHHHHHhc----chheecc-----chHHHHHHHhcCCc
Confidence 57899999999 8988654 89999999999993
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.016 Score=71.15 Aligned_cols=139 Identities=15% Similarity=0.109 Sum_probs=106.3
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHH----HHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCE
Q 001557 471 SNPRKPMILALARPDPKKNITTLVK----AFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQV 546 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~~Kgi~~ll~----A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V 546 (1054)
.+|+...++++=|+...|.....+. .+..+++ ...|.+++|.|+....... ........|+..++..+...+|
T Consensus 483 ~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~-d~~prv~~iFaGKAhP~y~--~aK~iIk~I~~~a~~in~~lkV 559 (750)
T COG0058 483 VDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKE-DWVPRVQIIFAGKAHPADY--AAKEIIKLINDVADVINNKLKV 559 (750)
T ss_pred cCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhc-CCCCceEEEEeccCCCcch--HHHHHHHHHHHHHHhhcccceE
Confidence 3577889999999999997665443 3334432 3446777676665433222 2356788888888888877788
Q ss_pred EeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCccccee--eCCceEEeC
Q 001557 547 AYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHR--VLDNGLLVD 616 (1054)
Q Consensus 547 ~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~--~~~~Gllv~ 616 (1054)
.|+...+-+--..++.+| ||-.+.|. .|..|..-+-|+.-|.|-|+|..|+..|+.+ .+.||++|-
T Consensus 560 vFl~nYdvslA~~iipa~----Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 560 VFLPNYDVSLAELLIPAA----DVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred EEeCCCChhHHHhhcccc----cccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 888887655555666777 99999886 7999999999999999999999999999986 788999995
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0026 Score=62.42 Aligned_cols=54 Identities=13% Similarity=0.012 Sum_probs=47.4
Q ss_pred EEEEEEecCCCC-----------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCC--------HHHHHHHHHhCCCC
Q 001557 770 YVFVIAADCDTT-----------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT--------ILELHSLLVSGGLS 827 (1054)
Q Consensus 770 kLiv~DiDGTL~-----------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~--------~~~i~~~l~~l~l~ 827 (1054)
|+++||+||||. ..+.+.+.++|+.|++. |+.++|+|+++ ...+..+++.+++.
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~----g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA----GYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC----CCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 689999999994 35678889999999986 89999999999 78889999999984
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0027 Score=62.15 Aligned_cols=52 Identities=17% Similarity=0.018 Sum_probs=43.8
Q ss_pred EEEEEEecCCC-Ch--------------hhHHHHHHHHHHHhccCCCCceEEEEEcCC-CHHHHHHHHHhCC
Q 001557 770 YVFVIAADCDT-TS--------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTAL-TILELHSLLVSGG 825 (1054)
Q Consensus 770 kLiv~DiDGTL-~~--------------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR-~~~~i~~~l~~l~ 825 (1054)
|+|++|+|||| +. .+-+.+.+.|+.++++ |+.++|+|++ +...+...++..+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~----g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN----GFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC----CeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999 22 2577999999999986 8999999999 7777778888776
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.014 Score=64.17 Aligned_cols=66 Identities=12% Similarity=0.084 Sum_probs=50.2
Q ss_pred CCCEEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEc---CCCHHHHHHHHHh-CCCCCCCCcEEEEc
Q 001557 767 RRKYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLST---ALTILELHSLLVS-GGLSPLAFDAFICN 837 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaT---GR~~~~i~~~l~~-l~l~~~~~d~lI~~ 837 (1054)
.+++.++||+|||+ ..+.-+...++|+.|+++ |+.+++.| .|+...+..-|+. .+++ ..+|.++++
T Consensus 6 ~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~----g~~~iflTNn~~~s~~~~~~~L~~~~~~~-~~~~~i~TS 77 (269)
T COG0647 6 DKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAA----GKPVIFLTNNSTRSREVVAARLSSLGGVD-VTPDDIVTS 77 (269)
T ss_pred hhcCEEEEcCcCceEeCCccCchHHHHHHHHHHc----CCeEEEEeCCCCCCHHHHHHHHHhhcCCC-CCHHHeecH
Confidence 45678999999999 577888999999999997 78777765 6677767788888 4443 345555553
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.60 E-value=2.7 Score=50.75 Aligned_cols=148 Identities=15% Similarity=0.195 Sum_probs=79.6
Q ss_pred HhhhcCCC--CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcC
Q 001557 466 IMHFFSNP--RKPMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYD 541 (1054)
Q Consensus 466 ~~~~~~~~--~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~ 541 (1054)
..+++... +..+.+++|.+. ..+.+..++.+++.+. ..+.++++...... ......+-..+.+.+
T Consensus 270 ~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~-----~~flw~~~~~~~~~--~~~~~~lp~~~~er~---- 338 (475)
T PLN02167 270 IMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVG-----CRFLWSIRTNPAEY--ASPYEPLPEGFMDRV---- 338 (475)
T ss_pred HHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCC-----CcEEEEEecCcccc--cchhhhCChHHHHHh----
Confidence 44444322 345667888764 3345677777777662 24545555321100 000000001111111
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc-----ceeeCCceEEeC
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD-----IHRVLDNGLLVD 616 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e-----iv~~~~~Gllv~ 616 (1054)
.++..+.+++|+.+ ++...+ .++||.= -|+ .+++||+++|+|+|+-...+=.- ++...+.|+.+.
T Consensus 339 -~~rg~v~~w~PQ~~---iL~h~~--vg~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 408 (475)
T PLN02167 339 -MGRGLVCGWAPQVE---ILAHKA--IGGFVSH---CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELR 408 (475)
T ss_pred -ccCeeeeccCCHHH---HhcCcc--cCeEEee---CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEee
Confidence 23445568887764 554431 1455522 233 47889999999999987543221 133335577664
Q ss_pred C---------CCHHHHHHHHHHHHhCH
Q 001557 617 P---------HDQQSIADALLKLVSDK 634 (1054)
Q Consensus 617 p---------~d~~~la~aI~~ll~d~ 634 (1054)
. -+.++++++|.+++.++
T Consensus 409 ~~~~~~~~~~~~~~~l~~av~~~m~~~ 435 (475)
T PLN02167 409 LDYVSAYGEIVKADEIAGAVRSLMDGE 435 (475)
T ss_pred cccccccCCcccHHHHHHHHHHHhcCC
Confidence 2 26889999999999753
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0039 Score=77.10 Aligned_cols=149 Identities=13% Similarity=0.103 Sum_probs=107.3
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCchhhhhchHHHHHHHHHHHHHcC---
Q 001557 471 SNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYD--- 541 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~~~~~~-----~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~--- 541 (1054)
.+|+...++++-|+...|...+ ++..+..+.++...| ..++|.|+....... ....+...|+.+++..+
T Consensus 523 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~iN~Dp 600 (794)
T TIGR02093 523 VDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYH--MAKLIIKLINSVAEVVNNDP 600 (794)
T ss_pred cCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 4678888999999999998777 666655554433332 345666665432221 22456777777775532
Q ss_pred -CCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCcccceee--CCceEE
Q 001557 542 -LYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDNGLL 614 (1054)
Q Consensus 542 -l~~--~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~--~~~Gll 614 (1054)
+.+ +|.|+....-+--..++.+| ||-.+.|. .|..|..-+-+|.-|.+.|+|..|+..|+.++ ..|+++
T Consensus 601 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fi 676 (794)
T TIGR02093 601 AVGDKLKVVFVPNYNVSLAELIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFI 676 (794)
T ss_pred hhCCceeEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEE
Confidence 344 68887776655556677777 99999886 79999999999999999999999999999876 779999
Q ss_pred eCCCCHHHHHHH
Q 001557 615 VDPHDQQSIADA 626 (1054)
Q Consensus 615 v~p~d~~~la~a 626 (1054)
|- .+.+++.+.
T Consensus 677 FG-~~~~ev~~~ 687 (794)
T TIGR02093 677 FG-LTVEEVEAL 687 (794)
T ss_pred cC-CCHHHHHHH
Confidence 95 466665543
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0061 Score=54.26 Aligned_cols=72 Identities=22% Similarity=0.236 Sum_probs=46.3
Q ss_pred CCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchH--HHHHHHccC
Q 001557 251 SSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGD--AAALLSGAL 328 (1054)
Q Consensus 251 ~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~--~a~~l~~~~ 328 (1054)
.+|++|+.+|+.+. ......|-+-.. +..+ ...+.+ .++||||+|.+.+.+ -+.+.++.+
T Consensus 13 tngLKVYYlP~~~~----~~~~t~Pt~~~~----~pl~---R~Ilir-------E~I~IVHgH~a~S~l~hE~i~hA~~m 74 (90)
T PF08288_consen 13 TNGLKVYYLPLKVF----YNQCTLPTLFGS----FPLL---RNILIR-------ERIDIVHGHQAFSTLCHEAILHARTM 74 (90)
T ss_pred CCCeEEEeecchhh----hcCcchHHHHHh----hHHH---HHHHHH-------cCeeEEEeehhhhHHHHHHHHHHHhC
Confidence 46999999998653 223333332221 1111 112222 459999999975544 467778899
Q ss_pred CCCEEEEeCCCc
Q 001557 329 NVPMVFTGHSLG 340 (1054)
Q Consensus 329 ~iP~V~t~H~l~ 340 (1054)
|+++|+|-||+.
T Consensus 75 GlktVfTDHSLf 86 (90)
T PF08288_consen 75 GLKTVFTDHSLF 86 (90)
T ss_pred CCcEEeeccccc
Confidence 999999999984
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=96.45 E-value=2.5 Score=50.95 Aligned_cols=94 Identities=19% Similarity=0.164 Sum_probs=58.5
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----ccee-eCCceEEeC--
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIHR-VLDNGLLVD-- 616 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv~-~~~~Gllv~-- 616 (1054)
+++.+.++.|+.+|-.. ..+ ++||.= +--.+++||+.+|+|+|+-..-+=. ..+. .-..|+.+.
T Consensus 337 ~~g~v~~W~PQ~~iL~H-~~v----~~FvtH----~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~ 407 (480)
T PLN02555 337 DKGKIVQWCPQEKVLAH-PSV----ACFVTH----CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRG 407 (480)
T ss_pred CceEEEecCCHHHHhCC-Ccc----CeEEec----CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCC
Confidence 46666788887653322 223 566632 2245889999999999998754311 1122 225676662
Q ss_pred -----CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001557 617 -----PHDQQSIADALLKLVSDKQLWERCRQNGLKN 647 (1054)
Q Consensus 617 -----p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 647 (1054)
.-+.++++.+|++++.+++ .+++++++++.
T Consensus 408 ~~~~~~v~~~~v~~~v~~vm~~~~-g~~~r~ra~~l 442 (480)
T PLN02555 408 EAENKLITREEVAECLLEATVGEK-AAELKQNALKW 442 (480)
T ss_pred ccccCcCcHHHHHHHHHHHhcCch-HHHHHHHHHHH
Confidence 1257899999999997643 45566555544
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0031 Score=70.46 Aligned_cols=68 Identities=9% Similarity=0.035 Sum_probs=50.8
Q ss_pred CCEEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCC---HHHHHHHHHhCCCCCCCCcEEEEcCCc
Q 001557 768 RKYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT---ILELHSLLVSGGLSPLAFDAFICNSGS 840 (1054)
Q Consensus 768 ~kkLiv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~---~~~i~~~l~~l~l~~~~~d~lI~~nGa 840 (1054)
|.++|+||+|||| .....+.+.++|++|+++ |+.|+++|+|+ ...+...++.+|++. .++-+++++.+
T Consensus 1 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~----g~~~~~~Tnns~~~~~~~~~~l~~~G~~~-~~~~i~ts~~~ 73 (279)
T TIGR01452 1 RAQGFIFDCDGVLWLGERVVPGAPELLDRLARA----GKAALFVTNNSTKSRAEYALKFARLGFNG-LAEQLFSSALC 73 (279)
T ss_pred CccEEEEeCCCceEcCCeeCcCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEecHHHH
Confidence 4579999999999 445566699999999986 89999999975 555556778888863 34455554333
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0072 Score=64.73 Aligned_cols=43 Identities=19% Similarity=0.290 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
.|...++.+++++|++++++++ +||+.+ | ++|++.+|.+|+|+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-i~aa~~ag~~i~~~ 194 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVA-VGDGAN-D-LSMIKAAGLGIAFN 194 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEE-EECCHH-H-HHHHHhCCCeEEeC
Confidence 4899999999999999999988 888887 8 99999999999995
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.44 Score=52.57 Aligned_cols=136 Identities=17% Similarity=0.249 Sum_probs=78.1
Q ss_pred HHhhhcCCCCCcEEEEE------eCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHH
Q 001557 465 EIMHFFSNPRKPMILAL------ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 538 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~v------gRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~ 538 (1054)
.++++...++.++|+.= .-....+++..+.+.+.+|.+. . . |+=.++. ...+.+.
T Consensus 172 vlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~---g-i--V~ipr~~-------------~~~eife 232 (346)
T COG1817 172 VLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKY---G-I--VLIPREK-------------EQAEIFE 232 (346)
T ss_pred HHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHhC---c-E--EEecCch-------------hHHHHHh
Confidence 45556666666666541 1122366777788888887532 2 2 3333332 1223344
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcccc---CcccceeeCCceEEe
Q 001557 539 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG---GPVDIHRVLDNGLLV 615 (1054)
Q Consensus 539 ~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~G---g~~eiv~~~~~Gllv 615 (1054)
.+. ++..+.. ..|--.|+--| ++++ .+-|.-.-||++.|+|.|++..| +..+... ..|+++
T Consensus 233 ~~~---n~i~pk~--~vD~l~Llyya----~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~ 296 (346)
T COG1817 233 GYR---NIIIPKK--AVDTLSLLYYA----TLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLY 296 (346)
T ss_pred hhc---cccCCcc--cccHHHHHhhh----heee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCcee
Confidence 432 2322222 22322344444 4655 34466678999999999999966 3333322 469999
Q ss_pred CCCCHHHHHHHHHHHHhCHH
Q 001557 616 DPHDQQSIADALLKLVSDKQ 635 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll~d~~ 635 (1054)
+-.|+.++.+...+.+.++.
T Consensus 297 ~s~~~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 297 HSTDEIAIVEYAVRNLKYRR 316 (346)
T ss_pred ecCCHHHHHHHHHHHhhchh
Confidence 98888877777777776554
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.38 Score=54.13 Aligned_cols=144 Identities=12% Similarity=0.052 Sum_probs=92.0
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEe-CCCCC
Q 001557 475 KPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAY-PKHHK 553 (1054)
Q Consensus 475 ~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~-~g~~~ 553 (1054)
+..|+---.-++.-+....++++.... ...-++.+-+|-+.. +++|..++.+...++--.+++.. ..++|
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~~-------n~~Yi~~V~~~~~~lF~~~~~~iL~e~mp 255 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGAN-------NQAYIQQVIQAGKELFGAENFQILTEFMP 255 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCCc-------hHHHHHHHHHHHHHhcCccceeEhhhhCC
Confidence 344544444778888988888887642 222233333454432 35678888888888754456654 56899
Q ss_pred CCcHHHHHHHhhcCCcEEEecCC-CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEe--CCCCHHHHHHHHHHH
Q 001557 554 QSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV--DPHDQQSIADALLKL 630 (1054)
Q Consensus 554 ~~dl~~ly~~Aa~~~dv~v~ps~-~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv--~p~d~~~la~aI~~l 630 (1054)
.+|..++++.| |++++... ..++|..+ =.+.+|+||+.+.....-..+.+..--+++ +.-|...+++|=+++
T Consensus 256 f~eYl~lL~~c----Dl~if~~~RQQgiGnI~-lLl~~G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql 330 (360)
T PF07429_consen 256 FDEYLALLSRC----DLGIFNHNRQQGIGNIC-LLLQLGKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQL 330 (360)
T ss_pred HHHHHHHHHhC----CEEEEeechhhhHhHHH-HHHHcCCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHH
Confidence 99999999999 99999974 67887654 468899999888755444433332222333 334455555554444
Q ss_pred Hh
Q 001557 631 VS 632 (1054)
Q Consensus 631 l~ 632 (1054)
..
T Consensus 331 ~~ 332 (360)
T PF07429_consen 331 AN 332 (360)
T ss_pred hh
Confidence 43
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.022 Score=73.41 Aligned_cols=54 Identities=11% Similarity=0.051 Sum_probs=46.6
Q ss_pred CEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 769 KYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 769 kkLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...+++..||++ ...+.+..+++|+.+++. |+.++++||.+...+..+++++|+
T Consensus 630 ~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~----gi~v~~~Tgd~~~~a~~ia~~lgi 689 (834)
T PRK10671 630 ATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKA----GYRLVMLTGDNPTTANAIAKEAGI 689 (834)
T ss_pred CeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCC
Confidence 367788888886 466778888999999886 899999999999999999999887
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.006 Score=57.10 Aligned_cols=52 Identities=15% Similarity=0.057 Sum_probs=42.9
Q ss_pred EEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEc---CCCHHHHHHHHHhCCCC
Q 001557 772 FVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLST---ALTILELHSLLVSGGLS 827 (1054)
Q Consensus 772 iv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaT---GR~~~~i~~~l~~l~l~ 827 (1054)
|+||+|||| ..++.+...++|++|++. |..|++.| +|+...+...|+.+|++
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~----g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRER----GKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHT----TSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHc----CCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999 577889999999999997 77777775 56778888888999995
|
... |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.059 Score=70.71 Aligned_cols=42 Identities=10% Similarity=0.045 Sum_probs=39.4
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...+.+.++++|+++++. |+.++++|||++..+..+.+++|+
T Consensus 566 ~Dplr~~v~~aI~~l~~~----Gi~v~~~TGd~~~ta~~ia~~~gi 607 (997)
T TIGR01106 566 IDPPRAAVPDAVGKCRSA----GIKVIMVTGDHPITAKAIAKGVGI 607 (997)
T ss_pred cCCChHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 467889999999999997 999999999999999999999998
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.0083 Score=61.59 Aligned_cols=64 Identities=11% Similarity=0.064 Sum_probs=47.1
Q ss_pred CCEEEEEEecCCCC---h-h-----------hHHHHHHHHHHHhccCCCCceEEEEEcCCCH------------HHHHHH
Q 001557 768 RKYVFVIAADCDTT---S-D-----------FLEIIKKVVEAAGKDNSAGFIGFVLSTALTI------------LELHSL 820 (1054)
Q Consensus 768 ~kkLiv~DiDGTL~---~-~-----------i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~------------~~i~~~ 820 (1054)
.+|+++||+||||. + . +-+.+.++|+.|+++ |+.++|+|..+. ..+..+
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~ 87 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE----GYKIVIFTNQSGIGRGKLSAESFKNKIEAF 87 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC----CCEEEEEeCCcccccCcccHHHHHHHHHHH
Confidence 46899999999992 1 1 226789999999986 899999996443 246788
Q ss_pred HHhCCCCCCCCcEEEEcC
Q 001557 821 LVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 821 l~~l~l~~~~~d~lI~~n 838 (1054)
++.+|+. ++.+|+++
T Consensus 88 l~~~gl~---~~~ii~~~ 102 (166)
T TIGR01664 88 LEKLKVP---IQVLAATH 102 (166)
T ss_pred HHHcCCC---EEEEEecC
Confidence 9999984 35555544
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.031 Score=60.02 Aligned_cols=44 Identities=11% Similarity=0.194 Sum_probs=34.6
Q ss_pred cCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEe
Q 001557 952 PVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 1000 (1054)
Q Consensus 952 p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaM 1000 (1054)
+.+.+|..+++.+++++|+ +++++ +||+.+ | +.|.+.++..++.
T Consensus 151 ~~~~~K~~~i~~~~~~~~~--~~~i~-iGDs~~-D-i~aa~~~~~~~~~ 194 (224)
T PLN02954 151 SRSGGKAEAVQHIKKKHGY--KTMVM-IGDGAT-D-LEARKPGGADLFI 194 (224)
T ss_pred cCCccHHHHHHHHHHHcCC--CceEE-EeCCHH-H-HHhhhcCCCCEEE
Confidence 3456799999999999986 57877 899999 9 9998776555444
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.86 Score=49.07 Aligned_cols=203 Identities=14% Similarity=0.089 Sum_probs=112.7
Q ss_pred CCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEE
Q 001557 302 GQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIV 381 (1054)
Q Consensus 302 ~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~V 381 (1054)
..+.+||++.+....+..++.++.++.+.+.|+.+.+- + .-.+.-|+|
T Consensus 66 ~p~~~Pdl~I~aGrrta~l~~~lkk~~~~~~vVqI~~P------------r--------------------lp~~~fDlv 113 (329)
T COG3660 66 KPEQRPDLIITAGRRTAPLAFYLKKKFGGIKVVQIQDP------------R--------------------LPYNHFDLV 113 (329)
T ss_pred CccCCCceEEecccchhHHHHHHHHhcCCceEEEeeCC------------C--------------------CCcccceEE
Confidence 33467999999988888888899888887766665542 0 014567999
Q ss_pred EecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCc
Q 001557 382 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPP 461 (1054)
Q Consensus 382 i~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1054)
|.+-++.++++-.. ...++|.-=.+....+. ....
T Consensus 114 ivp~HD~~~~~s~~----------------------------~~Nilpi~Gs~h~Vt~~-----------------~lAa 148 (329)
T COG3660 114 IVPYHDWREELSDQ----------------------------GPNILPINGSPHNVTSQ-----------------RLAA 148 (329)
T ss_pred eccchhhhhhhhcc----------------------------CCceeeccCCCCcccHH-----------------Hhhh
Confidence 99888766652111 11223321112222211 1122
Q ss_pred hhHHHhhhcCCCCCcEEEEEeCCCCCCCH-H----HHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHH
Q 001557 462 IWSEIMHFFSNPRKPMILALARPDPKKNI-T----TLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKL 536 (1054)
Q Consensus 462 ~~~~~~~~~~~~~~~~Il~vgRld~~Kgi-~----~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l 536 (1054)
..+..++++..+...+-+.||.-.+.=.. + .+..++.+..+ +....+ |+--.+-.. ..+...
T Consensus 149 ~~e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~-~~g~~~-lisfSRRTp-----------~~~~s~ 215 (329)
T COG3660 149 LREAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILE-NQGGSF-LISFSRRTP-----------DTVKSI 215 (329)
T ss_pred hHHHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHH-hCCceE-EEEeecCCc-----------HHHHHH
Confidence 23334445445677788999987655444 2 23333332221 112223 233333222 223333
Q ss_pred HHH-cCCCCCEEeCCC-CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccC
Q 001557 537 IDK-YDLYGQVAYPKH-HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG 601 (1054)
Q Consensus 537 ~~~-~~l~~~V~~~g~-~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg 601 (1054)
+.. +.-.+.+.+.+. -...-..+++.+| |.+|.+.-.-. -+.||++.|+||-+-...+
T Consensus 216 l~~~l~s~~~i~w~~~d~g~NPY~~~La~A----dyii~TaDSin---M~sEAasTgkPv~~~~~~~ 275 (329)
T COG3660 216 LKNNLNSSPGIVWNNEDTGYNPYIDMLAAA----DYIISTADSIN---MCSEAASTGKPVFILEPPN 275 (329)
T ss_pred HHhccccCceeEeCCCCCCCCchHHHHhhc----ceEEEecchhh---hhHHHhccCCCeEEEecCC
Confidence 333 444455666554 1334577899999 99999854222 3679999999997755433
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.05 Score=67.51 Aligned_cols=53 Identities=17% Similarity=0.075 Sum_probs=48.7
Q ss_pred EEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 770 YVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 770 kLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
+.++++.|+++ ...+.+..+++++++++. |+.+++.||-....+..+.+++|+
T Consensus 427 r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~----Gi~v~miTGD~~~ta~~iA~~lGI 485 (675)
T TIGR01497 427 TPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKM----GIKTIMITGDNRLTAAAIAAEAGV 485 (675)
T ss_pred eEEEEEECCEEEEEEEecccchhHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 77888888887 578999999999999997 999999999999999999999998
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.022 Score=70.92 Aligned_cols=148 Identities=12% Similarity=0.114 Sum_probs=108.0
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCchhhhhchHHHHHHHHHHHH----Hc
Q 001557 471 SNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDDIDEMSGTNAALLLSILKLID----KY 540 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~~~~~~-----~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~----~~ 540 (1054)
.+|+...++++-|+...|...+ ++..+.++.++...| ..++|.|+....... ....+...|+.+++ ..
T Consensus 539 ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIk~I~~va~~in~Dp 616 (815)
T PRK14986 539 VNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYY--MAKHIIHLINDVAKVINNDP 616 (815)
T ss_pred cCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 5678889999999999998887 667665554433332 355666665432221 23457777888777 23
Q ss_pred CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCcccceee--CCceEE
Q 001557 541 DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDNGLL 614 (1054)
Q Consensus 541 ~l~~--~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~--~~~Gll 614 (1054)
.+.+ +|.|+....-+--..++..| ||-.+.|. .|..|..-+-+|.-|.+.++|..|...|+.++ +.||++
T Consensus 617 ~v~~~lkVVFlenY~vslAe~lipg~----Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~ 692 (815)
T PRK14986 617 QIGDKLKVVFIPNYSVSLAQLIIPAA----DLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFI 692 (815)
T ss_pred hhcCceeEEEeCCCCHHHHHHhhhhh----hhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEE
Confidence 3444 68887776655555677777 99999886 79999999999999999999999999999876 789999
Q ss_pred eCCCCHHHHHH
Q 001557 615 VDPHDQQSIAD 625 (1054)
Q Consensus 615 v~p~d~~~la~ 625 (1054)
|- .+.+++.+
T Consensus 693 fG-~~~~ev~~ 702 (815)
T PRK14986 693 FG-NTAEEVEA 702 (815)
T ss_pred eC-CCHHHHHH
Confidence 95 45555544
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.06 Score=66.89 Aligned_cols=140 Identities=16% Similarity=0.168 Sum_probs=102.5
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCchhhhhchHHHHHHHHHHHHHcC---
Q 001557 471 SNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYD--- 541 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~~~~~~-----~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~--- 541 (1054)
.+|+...++++-|+...|...+ ++..+.++.+....| ..++|.|+....... ....+...|+.+++..+
T Consensus 525 ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~in~Dp 602 (798)
T PRK14985 525 INPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY--LAKNIIFAINKVAEVINNDP 602 (798)
T ss_pred cCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH--HHHHHHHHHHHHHHHhcCCh
Confidence 5678888999999999998777 666655554433333 255666665432211 22456777777775553
Q ss_pred -CCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCcccceee--CCceEE
Q 001557 542 -LYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDNGLL 614 (1054)
Q Consensus 542 -l~~--~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~--~~~Gll 614 (1054)
+.+ +|.|+....-+--..++.+| ||-.+.|. .|..|..-+-+|.-|.+.|+|-.|+..|+.+. +.||++
T Consensus 603 ~v~~~lkVVFlenY~VslAe~lipaa----Dvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~ 678 (798)
T PRK14985 603 LVGDKLKVVFLPDYCVSAAELLIPAA----DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFI 678 (798)
T ss_pred hhCCceeEEEeCCCChHHHHHHhhhh----hhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEE
Confidence 334 68888776655556677777 99999886 79999999999999999999999999999875 678999
Q ss_pred eC
Q 001557 615 VD 616 (1054)
Q Consensus 615 v~ 616 (1054)
|-
T Consensus 679 fG 680 (798)
T PRK14985 679 FG 680 (798)
T ss_pred eC
Confidence 84
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.68 E-value=6.9 Score=46.89 Aligned_cols=146 Identities=16% Similarity=0.165 Sum_probs=77.4
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhh-hchHHHHHHHHHHHHHcCCCCCEEeCC
Q 001557 474 RKPMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMS-GTNAALLLSILKLIDKYDLYGQVAYPK 550 (1054)
Q Consensus 474 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~-~~~~~~~~~i~~l~~~~~l~~~V~~~g 550 (1054)
+.-+.+++|.+. +.+-+..+..+++.+. . .+..++......+... ..............++. .++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~----~-~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~--~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGK----R-PFLWVITDKLNREAKIEGEEETEIEKIAGFRHEL--EEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcC----C-CeEEEEecCcccccccccccccccccchhHHHhc--cCCeEEEe
Confidence 345677788754 3456777888888773 1 4444555321100000 00000000011222222 34556668
Q ss_pred CCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc----ceee-CCceEEeC-----CCCH
Q 001557 551 HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD----IHRV-LDNGLLVD-----PHDQ 620 (1054)
Q Consensus 551 ~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e----iv~~-~~~Gllv~-----p~d~ 620 (1054)
++|+.+ ++...+ .++||.= +-..+++||+.+|+|+|+-...+=.- .+.+ -+.|+-+. .-+.
T Consensus 334 W~PQ~~---iL~h~~--vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~ 404 (455)
T PLN02152 334 WCSQIE---VLRHRA--VGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVER 404 (455)
T ss_pred eCCHHH---HhCCcc--cceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcH
Confidence 888764 555551 1344422 22458899999999999987543221 1111 12455442 2367
Q ss_pred HHHHHHHHHHHhCHH
Q 001557 621 QSIADALLKLVSDKQ 635 (1054)
Q Consensus 621 ~~la~aI~~ll~d~~ 635 (1054)
++++++|++++.++.
T Consensus 405 e~l~~av~~vm~~~~ 419 (455)
T PLN02152 405 GEIRRCLEAVMEEKS 419 (455)
T ss_pred HHHHHHHHHHHhhhH
Confidence 999999999997543
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.19 Score=61.86 Aligned_cols=146 Identities=12% Similarity=0.165 Sum_probs=88.5
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHH---HHHhccccc--CCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHc----
Q 001557 471 SNPRKPMILALARPDPKKNITT-LVK---AFGECRPLR--ELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY---- 540 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~~Kgi~~-ll~---A~~~l~~~~--~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~---- 540 (1054)
.+|+...++++-|+...|...+ ++. -+.+++... ....+++|+|+....... ...++...|..+++..
T Consensus 440 ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~--~gK~iIk~I~~va~~in~Dp 517 (713)
T PF00343_consen 440 LDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDY--MGKEIIKLINNVAEVINNDP 517 (713)
T ss_dssp --TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-H--HHHHHHHHHHHHHHHHCT-T
T ss_pred CCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHHHhcCh
Confidence 4678888999999999998776 333 444444321 112455666665432221 1245666676666543
Q ss_pred CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCcccceee--CCceEE
Q 001557 541 DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDNGLL 614 (1054)
Q Consensus 541 ~l~~--~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~--~~~Gll 614 (1054)
.+.+ +|.|+...+-+--..++..| ||-++.|+ .|..|..-+-+|.-|.+.++|..|...||.+. .+|.++
T Consensus 518 ~v~~~lkVvFlenYdvslA~~lipg~----DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fi 593 (713)
T PF00343_consen 518 EVGDRLKVVFLENYDVSLAEKLIPGV----DVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFI 593 (713)
T ss_dssp TTCCGEEEEEETT-SHHHHHHHGGG-----SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEE
T ss_pred hhccceeEEeecCCcHHHHHHHhhhh----hhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEE
Confidence 3444 67887776554445566666 99999986 79999999999999999999999999999753 357788
Q ss_pred eCCCCHHHH
Q 001557 615 VDPHDQQSI 623 (1054)
Q Consensus 615 v~p~d~~~l 623 (1054)
+- .+.+++
T Consensus 594 FG-~~~~ev 601 (713)
T PF00343_consen 594 FG-LTAEEV 601 (713)
T ss_dssp ES--BHHHH
T ss_pred cC-CCHHHH
Confidence 74 344443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.013 Score=63.83 Aligned_cols=66 Identities=14% Similarity=0.046 Sum_probs=53.0
Q ss_pred EEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEc---CCCHHHHHHHHHh-CCCCCCCCcEEEEcCCcEE
Q 001557 772 FVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLST---ALTILELHSLLVS-GGLSPLAFDAFICNSGSEL 842 (1054)
Q Consensus 772 iv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaT---GR~~~~i~~~l~~-l~l~~~~~d~lI~~nGa~I 842 (1054)
++||+|||| ...+.+.+.++|+.++++ |+.+++.| ||+...+.+.+.+ ++++ ..++-+|++..+..
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~----g~~~~~~tN~~~~~~~~~~~~l~~~~g~~-~~~~~iits~~~~~ 72 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAAEALNRLRAK----GKPVVFLTNNSSRSEEDYAEKLSSLLGVD-VSPDQIITSGSVTK 72 (236)
T ss_pred CEEeCcCccCcCCccCcCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHhcCCC-CCHHHeeeHHHHHH
Confidence 579999999 455666889999999986 78888887 9999999998888 7876 35677777755433
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.26 Score=64.54 Aligned_cols=43 Identities=12% Similarity=0.096 Sum_probs=39.9
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
...+.+.++++++++++. |+.+++.||-+...+..+.+++|+.
T Consensus 577 ~Dplr~~~~~aI~~l~~a----GI~v~miTGD~~~tA~~iA~~~GI~ 619 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRA----GITVRMVTGDNIDTAKAIARNCGIL 619 (941)
T ss_pred cCCCchhHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCC
Confidence 467889999999999997 9999999999999999999999983
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.11 Score=55.68 Aligned_cols=46 Identities=13% Similarity=0.090 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcce-EEEecCcc
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKGVG 1004 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~-gVaMgNa~ 1004 (1054)
.+..+++.++++++++++++++ +||+.+ | +++.+.+|. +|.+..+.
T Consensus 150 p~~~~~~~~~~~~~~~~~~~i~-igD~~~-D-i~~a~~~g~~~i~v~~g~ 196 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPEEMLF-VGDSRN-D-IQAARAAGCPSVGVTYGY 196 (226)
T ss_pred cChHHHHHHHHHcCCChhheEE-ECCCHH-H-HHHHHHCCCcEEEECcCC
Confidence 3578999999999999999988 999988 9 999999997 66665443
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.022 Score=62.19 Aligned_cols=67 Identities=13% Similarity=0.005 Sum_probs=50.3
Q ss_pred CCCEEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEcCC--CHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 767 RRKYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTAL--TILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR--~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
.+.++++||+|||+ ...+.+.+.++|++|+++ |+.++|+|.- +...+.+.++.+|++...+|.++++
T Consensus 6 ~~~~~~~~D~dG~l~~~~~~~pga~e~L~~L~~~----G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s 76 (242)
T TIGR01459 6 NDYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQ----GKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISS 76 (242)
T ss_pred hcCCEEEEecccccccCCccCccHHHHHHHHHHC----CCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEcc
Confidence 34578999999999 356789999999999986 8888886554 4444447899999952146655553
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.12 Score=65.94 Aligned_cols=55 Identities=13% Similarity=-0.063 Sum_probs=47.1
Q ss_pred CEEEEEEe---cCCC--------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 769 KYVFVIAA---DCDT--------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 769 kkLiv~Di---DGTL--------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
.+.+++++ ++.| ...+.+.++++++++++. |+.+++.||.+...+..+.+++|+.
T Consensus 417 ~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI~ 482 (755)
T TIGR01647 417 YRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHL----GVEVKMVTGDHLAIAKETARRLGLG 482 (755)
T ss_pred CEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 37777777 3333 478999999999999997 9999999999999999999999983
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.3 Score=63.30 Aligned_cols=43 Identities=16% Similarity=0.019 Sum_probs=39.9
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
...+.+.++++++++++. |+.+++.||-+...+..+.+++|+.
T Consensus 513 ~Dp~R~~~~~aI~~l~~a----GI~vvmiTGD~~~tA~aIA~~lGI~ 555 (867)
T TIGR01524 513 LDPPKESTKEAIAALFKN----GINVKVLTGDNEIVTARICQEVGID 555 (867)
T ss_pred eCCCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 467899999999999997 9999999999999999999999983
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.03 Score=62.38 Aligned_cols=51 Identities=18% Similarity=0.109 Sum_probs=42.1
Q ss_pred ecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcce-EEEecCcc
Q 001557 951 IPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKGVG 1004 (1054)
Q Consensus 951 ~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~-gVaMgNa~ 1004 (1054)
++..-.+...+.++++++|++++++++ +||+.+ | ++|-+.+|. ++.+.++.
T Consensus 153 ~~~~Kp~p~~~~~~~~~~g~~~~~~l~-IGD~~~-D-i~aA~~aGi~~i~v~~G~ 204 (272)
T PRK13223 153 LPQKKPDPAALLFVMKMAGVPPSQSLF-VGDSRS-D-VLAAKAAGVQCVALSYGY 204 (272)
T ss_pred CCCCCCCcHHHHHHHHHhCCChhHEEE-ECCCHH-H-HHHHHHCCCeEEEEecCC
Confidence 455566788999999999999999998 888888 9 999999996 55665543
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.082 Score=56.46 Aligned_cols=45 Identities=13% Similarity=-0.044 Sum_probs=33.7
Q ss_pred ecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 951 IPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 951 ~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
...|..|...|+.++ |.+.+..++ -||+-+ | ++||+.+++++++.
T Consensus 158 ~c~g~~K~~~l~~~~---~~~~~~~~a-Y~Ds~~-D-~pmL~~a~~~~~vn 202 (211)
T PRK11590 158 RCLGHEKVAQLERKI---GTPLRLYSG-YSDSKQ-D-NPLLYFCQHRWRVT 202 (211)
T ss_pred cCCChHHHHHHHHHh---CCCcceEEE-ecCCcc-c-HHHHHhCCCCEEEC
Confidence 345556666666544 667777777 788888 8 99999999999985
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.12 Score=63.59 Aligned_cols=54 Identities=19% Similarity=0.167 Sum_probs=48.8
Q ss_pred CEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCc-eEEEEEcCCCHHHHHHHHHhCCC
Q 001557 769 KYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGF-IGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 769 kkLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~g-i~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
.+.++++.||++ ...+-+..+++|+.|++. | +.++|+||.+...+..+++++|+
T Consensus 364 ~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~----g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 364 KTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRA----GGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred cEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHc----CCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 478889999987 467899999999999987 7 99999999999999999999987
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.21 Score=65.82 Aligned_cols=43 Identities=12% Similarity=-0.089 Sum_probs=39.7
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
...+.+.++++|+.+++. ||.+++.||.+...+..+.+++|+.
T Consensus 644 ~Dp~r~~v~~aI~~l~~a----GIkv~MiTGD~~~tA~~iA~~~Gi~ 686 (1053)
T TIGR01523 644 YDPPRNESAGAVEKCHQA----GINVHMLTGDFPETAKAIAQEVGII 686 (1053)
T ss_pred ecCCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCCC
Confidence 467889999999999997 9999999999999999999999983
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.099 Score=69.10 Aligned_cols=43 Identities=16% Similarity=0.098 Sum_probs=39.5
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
...+.+.++++|+.+++. ||.++++||.+...+..+.+++|+-
T Consensus 654 ~d~lr~~~~~~I~~l~~a----gi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 654 ENPLKPDTKEVIKELKRA----SIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred ecCCCccHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 366889999999999997 9999999999999999999999983
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.32 Score=63.12 Aligned_cols=42 Identities=14% Similarity=-0.021 Sum_probs=39.6
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...+.+.++++++++++. |+.+++.||=+...+..+.+++|+
T Consensus 548 ~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI 589 (902)
T PRK10517 548 LDPPKETTAPALKALKAS----GVTVKILTGDSELVAAKVCHEVGL 589 (902)
T ss_pred hCcchhhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 477899999999999997 999999999999999999999998
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.097 Score=64.46 Aligned_cols=54 Identities=15% Similarity=0.103 Sum_probs=48.9
Q ss_pred CEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 769 KYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 769 kkLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...++++.||++ ...+.+..+++|++|++. |+.++++||.+...+..+++++|+
T Consensus 385 ~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~----Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 385 STSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRR----GIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred CEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHHcCC
Confidence 477889999988 577899999999999986 899999999999999999999887
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.11 Score=65.92 Aligned_cols=54 Identities=13% Similarity=0.015 Sum_probs=49.1
Q ss_pred CEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 769 KYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 769 kkLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
++.+++..|+++ ...+.+..+++|++|++. |+.+++.||.+...+..+.+++|+
T Consensus 548 ~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~----gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 548 KTVVLVLRNDDVLGLIALQDTLRADARQAISELKAL----GIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred CEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 478889999987 477899999999999987 899999999999999999999987
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.12 Score=67.20 Aligned_cols=42 Identities=10% Similarity=-0.005 Sum_probs=38.5
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...+.+.+.++|+++++. |+.+++.||.+...+..+.+++|+
T Consensus 535 ~Dplr~~v~e~I~~l~~a----GI~v~miTGD~~~tA~~ia~~~gi 576 (917)
T TIGR01116 535 LDPPRPEVADAIEKCRTA----GIRVIMITGDNKETAEAICRRIGI 576 (917)
T ss_pred eCCCchhHHHHHHHHHHC----CCEEEEecCCCHHHHHHHHHHcCC
Confidence 356788999999999986 999999999999999999999998
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.062 Score=54.08 Aligned_cols=50 Identities=18% Similarity=-0.001 Sum_probs=41.0
Q ss_pred EEEEEecCCCC--------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHH---HHHHHhC
Q 001557 771 VFVIAADCDTT--------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILEL---HSLLVSG 824 (1054)
Q Consensus 771 Liv~DiDGTL~--------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i---~~~l~~l 824 (1054)
++++|||||+| ....+.+.++..+++++ |..|+..|+|+.... +.||...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~----GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN----GYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC----CeEEEEECcCcHHHHHHHHHHHHHH
Confidence 48999999994 23667888999999987 999999999997654 5678777
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.28 Score=54.68 Aligned_cols=42 Identities=24% Similarity=0.202 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEe
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 1000 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaM 1000 (1054)
.|..++.++++++|++++++++ +||+.+ | +.+-..+|..++.
T Consensus 196 ~k~~~~~~~l~~~~~~p~~~l~-IGDs~~-D-i~aA~~AG~~~I~ 237 (273)
T PRK13225 196 SKRRALSQLVAREGWQPAAVMY-VGDETR-D-VEAARQVGLIAVA 237 (273)
T ss_pred CCHHHHHHHHHHhCcChhHEEE-ECCCHH-H-HHHHHHCCCeEEE
Confidence 4678999999999999999988 899988 9 8888888876543
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.055 Score=58.69 Aligned_cols=36 Identities=8% Similarity=-0.003 Sum_probs=30.6
Q ss_pred HHHHHHHHhccCCCCceEEEEEcCC----CHHHHHHHHHhCCCC
Q 001557 788 IKKVVEAAGKDNSAGFIGFVLSTAL----TILELHSLLVSGGLS 827 (1054)
Q Consensus 788 ~~~al~~l~~~~~~~gi~fvIaTGR----~~~~i~~~l~~l~l~ 827 (1054)
.+++|+.++++ |+.++|+|+| .-..+..+++.+|++
T Consensus 119 a~elL~~l~~~----G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 119 ARQLIDMHQRR----GDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred HHHHHHHHHHC----CCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 77888888886 8999999999 556788888889984
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.41 Score=62.25 Aligned_cols=55 Identities=13% Similarity=-0.017 Sum_probs=48.1
Q ss_pred CEEEEEEecC-----CC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 769 KYVFVIAADC-----DT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 769 kkLiv~DiDG-----TL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
.|.++++++. ++ ...+-+.++++|+.+++. |+.+++.||-+...+..+.+++|+.
T Consensus 503 ~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~----Gi~v~miTGD~~~tA~~ia~~~Gi~ 568 (884)
T TIGR01522 503 LRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITG----GVRIIMITGDSQETAVSIARRLGMP 568 (884)
T ss_pred CEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 3788888775 33 478899999999999986 9999999999999999999999984
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.071 Score=57.22 Aligned_cols=56 Identities=13% Similarity=-0.032 Sum_probs=46.0
Q ss_pred CCEEEEEEecCCC--C---------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHH--
Q 001557 768 RKYVFVIAADCDT--T---------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILE-- 816 (1054)
Q Consensus 768 ~kkLiv~DiDGTL--~---------------------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~-- 816 (1054)
.+-++|||+|-|+ + ....+.++++++.++++ |+.|+++|||+...
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~----G~~Vf~lTGR~e~~r~ 151 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIEL----GIKIFLLSGRWEELRN 151 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHC----CCEEEEEcCCChHHHH
Confidence 4578999999997 0 33567788899999987 99999999999766
Q ss_pred -HHHHHHhCCCC
Q 001557 817 -LHSLLVSGGLS 827 (1054)
Q Consensus 817 -i~~~l~~l~l~ 827 (1054)
+.+.|.+.|++
T Consensus 152 ~T~~nL~~~G~~ 163 (229)
T TIGR01675 152 ATLDNLINAGFT 163 (229)
T ss_pred HHHHHHHHcCCC
Confidence 77888888883
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.066 Score=57.93 Aligned_cols=40 Identities=15% Similarity=0.101 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 957 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
+...+.++++++|++++++++ +||+.+ | +.+-+.+|..++
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~-IGDs~~-D-i~aA~~aG~~~i 192 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVY-VGDDER-D-ILAARAAGMPSV 192 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEE-eCCCHH-H-HHHHHHCCCcEE
Confidence 456789999999999999998 888888 9 999999987654
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.41 Score=62.21 Aligned_cols=42 Identities=12% Similarity=-0.009 Sum_probs=39.6
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...+.+.++++++++++. ||.+++.||=+...+..+.+++|+
T Consensus 548 ~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~aIA~~lGI 589 (903)
T PRK15122 548 LDPPKESAAPAIAALREN----GVAVKVLTGDNPIVTAKICREVGL 589 (903)
T ss_pred cCccHHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 477899999999999997 999999999999999999999998
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.28 Score=61.12 Aligned_cols=53 Identities=21% Similarity=0.095 Sum_probs=48.4
Q ss_pred EEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 770 YVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 770 kLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
+.+++..|+++ ...+.+..+++++++++. |+.+++.||=+...+..+.+++|+
T Consensus 426 ~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 484 (679)
T PRK01122 426 TPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKM----GIKTVMITGDNPLTAAAIAAEAGV 484 (679)
T ss_pred cEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 66788888887 577899999999999997 999999999999999999999998
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.057 Score=55.75 Aligned_cols=53 Identities=9% Similarity=-0.017 Sum_probs=45.7
Q ss_pred EEEEEEecCCC-C----------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCC-CHHHHHH
Q 001557 770 YVFVIAADCDT-T----------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTAL-TILELHS 819 (1054)
Q Consensus 770 kLiv~DiDGTL-~----------------------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR-~~~~i~~ 819 (1054)
||+|||+|+|+ + ..+-+.+.++|+.|+++ |+.++|+|+. +...+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~----G~~l~I~Sn~~~~~~~~~ 78 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDA----GTYLATASWNDVPEWAYE 78 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHC----CCEEEEEeCCCChHHHHH
Confidence 89999999999 0 23557889999999986 9999999988 8888889
Q ss_pred HHHhCCC
Q 001557 820 LLVSGGL 826 (1054)
Q Consensus 820 ~l~~l~l 826 (1054)
+++.+++
T Consensus 79 ~L~~~~l 85 (174)
T TIGR01685 79 ILGTFEI 85 (174)
T ss_pred HHHhCCc
Confidence 9999887
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.11 E-value=1.8 Score=49.78 Aligned_cols=80 Identities=14% Similarity=0.059 Sum_probs=49.8
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhc
Q 001557 487 KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 566 (1054)
Q Consensus 487 ~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~ 566 (1054)
.+.++.+++|+.++.+. . +.+++....+. +.+.....+. ..+.+.+ +..++|+.|
T Consensus 182 ~~llP~~~~aa~~L~~~--~--~~~~i~~a~~~-----------~~i~~~~~~~---~~~~~~~-----~~~~~m~~a-- 236 (347)
T PRK14089 182 KRLMPIFKELAKKLEGK--E--KILVVPSFFKG-----------KDLKEIYGDI---SEFEISY-----DTHKALLEA-- 236 (347)
T ss_pred HHHHHHHHHHHHHHhhc--C--cEEEEeCCCcH-----------HHHHHHHhcC---CCcEEec-----cHHHHHHhh--
Confidence 35567777888888532 1 34443332221 2233333322 1333332 557899999
Q ss_pred CCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc
Q 001557 567 TKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 598 (1054)
Q Consensus 567 ~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~ 598 (1054)
|++|..| |.+.+|++.+|+|.|..-
T Consensus 237 --Dlal~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 237 --EFAFICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred --hHHHhcC-----cHHHHHHHHhCCCEEEEE
Confidence 9999776 888889999999988743
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.069 Score=53.51 Aligned_cols=53 Identities=11% Similarity=-0.038 Sum_probs=42.0
Q ss_pred EEEEEEecCCCC-h------------hhHHHHHHHHHHHhccCCCCceEEEEEcCCC---------------HHHHHHHH
Q 001557 770 YVFVIAADCDTT-S------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALT---------------ILELHSLL 821 (1054)
Q Consensus 770 kLiv~DiDGTL~-~------------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~---------------~~~i~~~l 821 (1054)
++++||+||||+ . .+-+.+.++|+.|+++ |+.++|+|..+ ...+...+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~----g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l 76 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA----GYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELL 76 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC----CCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHH
Confidence 468999999993 1 2367889999999986 89999999865 25667778
Q ss_pred HhCCC
Q 001557 822 VSGGL 826 (1054)
Q Consensus 822 ~~l~l 826 (1054)
+.+++
T Consensus 77 ~~~~l 81 (147)
T TIGR01656 77 RQLGV 81 (147)
T ss_pred HhCCC
Confidence 88887
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=93.88 E-value=4.1 Score=44.19 Aligned_cols=83 Identities=19% Similarity=0.274 Sum_probs=57.4
Q ss_pred EecCCCCHHHHHHHHHHHh---CCCccCEEEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccC-
Q 001557 950 VIPVLASRSQALRYLHVRW---GIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFD- 1025 (1054)
Q Consensus 950 V~p~~asKg~AL~~L~~~~---gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~- 1025 (1054)
--|.+.-||..|+.+.... |++-++++. +||+.| ||-.+++--..-++|.-- +|++.+.+...
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviY-iGDG~n-D~Cp~~~L~~~D~v~~R~-----------~~~l~~~i~~~~ 210 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIY-IGDGRN-DFCPALRLRPRDVVFPRK-----------GYPLHKLIQKNP 210 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEE-ECCCCC-CcCcccccCCCCEEecCC-----------CChHHHHHhcCC
Confidence 4477788999999998874 777777877 999999 988998877777888633 35555555432
Q ss_pred ---CCceEEeccccCHHHHHHHHHHh
Q 001557 1026 ---SHNVIQVDEACDSYDIRASLEKL 1048 (1054)
Q Consensus 1026 ---~~~~~~~t~~~~~~gI~~al~~~ 1048 (1054)
+..+..= .+..+|.+-|+++
T Consensus 211 ~~~~a~v~~W---~~g~~i~~~l~~~ 233 (234)
T PF06888_consen 211 GEVKAEVVPW---SSGEEILEILLQL 233 (234)
T ss_pred CcceeEEEec---CCHHHHHHHHHhh
Confidence 2222222 3466777777654
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.1 Score=62.97 Aligned_cols=66 Identities=12% Similarity=0.135 Sum_probs=51.1
Q ss_pred cCCCEEEEEEecCCCC--h-------------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCH------------HHHH
Q 001557 766 RRRKYVFVIAADCDTT--S-------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTI------------LELH 818 (1054)
Q Consensus 766 ~~~kkLiv~DiDGTL~--~-------------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~------------~~i~ 818 (1054)
..+.|+++||+||||. + -+-+.+.++|+.|.++ |+.++|+|--+- ..+.
T Consensus 165 ~~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~----Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~ 240 (526)
T TIGR01663 165 KGQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD----GFKICIFTNQGGIARGKINADDFKAKIE 240 (526)
T ss_pred CccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC----CCEEEEEECCcccccCcccHHHHHHHHH
Confidence 3556999999999992 1 1357788999999987 899999987544 3477
Q ss_pred HHHHhCCCCCCCCcEEEEcC
Q 001557 819 SLLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 819 ~~l~~l~l~~~~~d~lI~~n 838 (1054)
.+++.+|++ ++.++|..
T Consensus 241 ~iL~~lgip---fdviia~~ 257 (526)
T TIGR01663 241 AIVAKLGVP---FQVFIAIG 257 (526)
T ss_pred HHHHHcCCc---eEEEEeCC
Confidence 889999984 67777754
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.14 Score=54.15 Aligned_cols=40 Identities=20% Similarity=0.337 Sum_probs=29.0
Q ss_pred CCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 955 ASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 955 asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
..|..+++ .++...+++++ +||+.+ | +.|.+.+|.||+.+
T Consensus 131 ~~k~~~l~----~~~~~~~~~v~-iGDs~~-D-~~~~~aa~~~v~~~ 170 (205)
T PRK13582 131 DGKRQAVK----ALKSLGYRVIA-AGDSYN-D-TTMLGEADAGILFR 170 (205)
T ss_pred chHHHHHH----HHHHhCCeEEE-EeCCHH-H-HHHHHhCCCCEEEC
Confidence 34544544 44444567777 899988 9 99999999998764
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.17 Score=55.83 Aligned_cols=66 Identities=11% Similarity=0.061 Sum_probs=49.0
Q ss_pred CCEEEEEEecCCC-C----------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCH---H
Q 001557 768 RKYVFVIAADCDT-T----------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTI---L 815 (1054)
Q Consensus 768 ~kkLiv~DiDGTL-~----------------------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~---~ 815 (1054)
++..|++|||+|+ + ..+-+.+.++|+.+++. |+.++|+|+|+. .
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~----G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSK----GVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHC----CCeEEEEeCCCcchHH
Confidence 3579999999999 1 22446778899999886 899999999984 4
Q ss_pred HHHHHHHhCCCCCCCCcEEEEc
Q 001557 816 ELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 816 ~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
.+...|+.+|++...++.++..
T Consensus 150 ~T~~~Lkk~Gi~~~~~d~lllr 171 (266)
T TIGR01533 150 ATLKNLKRFGFPQADEEHLLLK 171 (266)
T ss_pred HHHHHHHHcCcCCCCcceEEeC
Confidence 4558888999853234556554
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=93.55 E-value=0.11 Score=52.96 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=45.0
Q ss_pred CEEEEEEecCCCChh--------------hHHHHHHHHHHHhccCCCCceEEEEEcCC---------------CHHHHHH
Q 001557 769 KYVFVIAADCDTTSD--------------FLEIIKKVVEAAGKDNSAGFIGFVLSTAL---------------TILELHS 819 (1054)
Q Consensus 769 kkLiv~DiDGTL~~~--------------i~~~~~~al~~l~~~~~~~gi~fvIaTGR---------------~~~~i~~ 819 (1054)
+|+++||.||||... +-+.+.++|+.|+++ |+.++|+|-- +...+..
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~----g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~ 76 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA----GYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQ 76 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC----CCeEEEEeCCccccCCcCCHHHHHHHHHHHHH
Confidence 378999999999321 336688999999986 8888888864 3456778
Q ss_pred HHHhCCCCCCCCcEEE
Q 001557 820 LLVSGGLSPLAFDAFI 835 (1054)
Q Consensus 820 ~l~~l~l~~~~~d~lI 835 (1054)
+++.+|+. ||.++
T Consensus 77 ~l~~~gl~---fd~ii 89 (161)
T TIGR01261 77 IFRSQGII---FDDVL 89 (161)
T ss_pred HHHHCCCc---eeEEE
Confidence 89999983 55443
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.41 Score=51.34 Aligned_cols=45 Identities=9% Similarity=0.014 Sum_probs=37.7
Q ss_pred CCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 954 ~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
+=.+...++.+++++|++++++++ +||+.+ | +++-+.+|..++.-
T Consensus 147 ~Kp~~~~~~~~~~~~~~~~~~~~~-igDs~~-D-i~aA~~aG~~~i~v 191 (222)
T PRK10826 147 SKPHPEVYLNCAAKLGVDPLTCVA-LEDSFN-G-MIAAKAARMRSIVV 191 (222)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEE-EcCChh-h-HHHHHHcCCEEEEe
Confidence 334567999999999999999998 999998 9 99999999765553
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.27 Score=50.41 Aligned_cols=36 Identities=11% Similarity=0.257 Sum_probs=29.1
Q ss_pred CCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCc
Q 001557 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV 994 (1054)
Q Consensus 954 ~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~a 994 (1054)
+-.|+.+|+.|++ |.+.+.++. +||+.| | ++|..-+
T Consensus 157 sggKa~~i~~lrk--~~~~~~~~m-vGDGat-D-lea~~pa 192 (227)
T KOG1615|consen 157 SGGKAEVIALLRK--NYNYKTIVM-VGDGAT-D-LEAMPPA 192 (227)
T ss_pred CCccHHHHHHHHh--CCChheeEE-ecCCcc-c-cccCCch
Confidence 3379999999999 777777777 999999 9 8877653
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.55 Score=58.53 Aligned_cols=53 Identities=13% Similarity=0.075 Sum_probs=46.1
Q ss_pred EEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 770 YVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 770 kLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
+.+++..|+++ ...+.+..+++++++++. |+.+++.||-+...+..+.+++|+
T Consensus 422 ~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 422 TPLVVLEDNEILGVIYLKDVIKDGLVERFRELREM----GIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred eEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 44555567776 477899999999999997 999999999999999999999998
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=93.32 E-value=1.6 Score=44.23 Aligned_cols=101 Identities=17% Similarity=0.127 Sum_probs=55.8
Q ss_pred cceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 306 WPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 306 ~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+|+|.+.+. +...+..+.....++|.++.+|.-...+-. ..+. ..++ .|.+..- ...-.||.|+..
T Consensus 59 ~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~YP~---~~~~--~rd~--~~~~~ni-----~saLaAD~v~FN 126 (168)
T PF12038_consen 59 SYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLAYPV---SPGQ--ERDF--QYGMNNI-----YSALAADRVVFN 126 (168)
T ss_pred CCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcccCCC---CCCc--cccc--cHHHHHH-----HHHHhceeeeec
Confidence 4799999875 434443444455689999999974222100 0010 0111 2222222 245689999999
Q ss_pred CHHHHHHHHh-------hhcCCC-hHHHHHHHHhHhcccccCCCCCCcEEEeCCCC
Q 001557 385 TRQEIEEQWR-------LYDGFD-PVLERKLRARIKRGVSCHGRFMPRMVVIPPGI 432 (1054)
Q Consensus 385 S~~~~~~~~~-------~y~~~~-~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGI 432 (1054)
|....+.+.. .++.+. ..+.+.|++ |..|+|.||
T Consensus 127 S~~nr~sFL~~~~~fL~~~PD~~p~~~~~~I~~--------------Ks~VL~~pi 168 (168)
T PF12038_consen 127 SAFNRDSFLDGIPSFLKRMPDHRPKGLVERIRA--------------KSQVLPVPI 168 (168)
T ss_pred chhhHHHHHHHHHHHHHHCCCCCchhHHHHHhc--------------cCeecCCCC
Confidence 9876655433 233332 333344433 788999886
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=93.30 E-value=0.79 Score=53.29 Aligned_cols=109 Identities=12% Similarity=0.189 Sum_probs=64.2
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEc--cc-------cCcccceeeCCce
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT--KN-------GGPVDIHRVLDNG 612 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat--~~-------Gg~~eiv~~~~~G 612 (1054)
..++|.+... ..++.+++..| |++| --++-++.|++.++.|||-- +. |...++ .....|
T Consensus 250 ~~~~i~~~~~--~~~~~~ll~~a----DiLI-----TDySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-~~~~pg 317 (369)
T PF04464_consen 250 DNSNIIFVSD--NEDIYDLLAAA----DILI-----TDYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-EEDLPG 317 (369)
T ss_dssp -TTTEEE-TT---S-HHHHHHT-----SEEE-----ESS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-TTSSSS
T ss_pred cCCcEEECCC--CCCHHHHHHhc----CEEE-----EechhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-HhhCCC
Confidence 3466776654 34899999999 9977 35678999999999999953 22 333332 122346
Q ss_pred EEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001557 613 LLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 613 llv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l 664 (1054)
-.+. +.+++.++|..++.++....+.++...+..-.|.=...+++..+.+
T Consensus 318 ~~~~--~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 318 PIVY--NFEELIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYI 367 (369)
T ss_dssp -EES--SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHH
T ss_pred ceeC--CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 6665 8999999999999877655544444444443344445566655544
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.13 Score=53.52 Aligned_cols=41 Identities=7% Similarity=-0.106 Sum_probs=33.7
Q ss_pred CEEEEEEecCCCC------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCC
Q 001557 769 KYVFVIAADCDTT------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT 813 (1054)
Q Consensus 769 kkLiv~DiDGTL~------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~ 813 (1054)
.|+++||.||||. -.+.+.+.++|++|+++ |+.++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA----GYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC----CCEEEEEeCCc
Confidence 4999999999991 23456778999999986 89999999875
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=93.23 E-value=25 Score=42.62 Aligned_cols=93 Identities=22% Similarity=0.153 Sum_probs=54.2
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc-----ceeeCCceEEeC---
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD-----IHRVLDNGLLVD--- 616 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e-----iv~~~~~Gllv~--- 616 (1054)
.+.+.+++|+.+ ++...+ .++||. -+-..+++||+++|+|+|+-...+-.- +++.-..|+-+.
T Consensus 345 g~~v~~w~pq~~---iL~h~~--v~~fvt----H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~ 415 (491)
T PLN02534 345 GLLIKGWAPQVL---ILSHPA--IGGFLT----HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEV 415 (491)
T ss_pred CeeccCCCCHHH---HhcCCc--cceEEe----cCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccc
Confidence 466778988854 555551 123552 233468899999999999987543211 111122344331
Q ss_pred ------------CCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Q 001557 617 ------------PHDQQSIADALLKLVSD-KQLWERCRQNGLK 646 (1054)
Q Consensus 617 ------------p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~ 646 (1054)
--+.++++.++++++.+ .++-+++++++.+
T Consensus 416 ~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~e 458 (491)
T PLN02534 416 PVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQE 458 (491)
T ss_pred cccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 12678999999999962 2223344444443
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=93.16 E-value=25 Score=42.36 Aligned_cols=92 Identities=14% Similarity=0.157 Sum_probs=54.1
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cce-eeCCceEEeC----
Q 001557 546 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIH-RVLDNGLLVD---- 616 (1054)
Q Consensus 546 V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv-~~~~~Gllv~---- 616 (1054)
+.+.++.|+.+|.. ..+ .+.||.= +--.+.+||+.+|+|+|+-...+=. ..+ +....|+-+.
T Consensus 337 l~v~~W~PQ~~vL~---h~~--vg~fvtH----~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~ 407 (470)
T PLN03015 337 LVVTQWAPQVEILS---HRS--IGGFLSH----CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS 407 (470)
T ss_pred eEEEecCCHHHHhc---cCc--cCeEEec----CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc
Confidence 45668888876544 331 1455522 2235888999999999998753321 111 2234565553
Q ss_pred --CCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Q 001557 617 --PHDQQSIADALLKLVSD-KQLWERCRQNGLK 646 (1054)
Q Consensus 617 --p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~ 646 (1054)
.-..++++.+|++++.. .++-+++++++.+
T Consensus 408 ~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~ 440 (470)
T PLN03015 408 EKVIGREEVASLVRKIVAEEDEEGQKIRAKAEE 440 (470)
T ss_pred CCccCHHHHHHHHHHHHccCcccHHHHHHHHHH
Confidence 23678999999999952 1223344444443
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.43 Score=58.49 Aligned_cols=53 Identities=11% Similarity=-0.036 Sum_probs=46.9
Q ss_pred EEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCce-EEEEEcCCCHHHHHHHHHhCCC
Q 001557 770 YVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFI-GFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 770 kLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi-~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
..+++..|+++ ...+.+..+++|+.|++. |+ .++++||.+...+..+++++|+
T Consensus 343 ~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~----Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 343 TIVHVARDGTYLGYILLSDEPRPDAAEAIAELKAL----GIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred eEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHc----CCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 56777788877 467889999999999987 89 9999999999999999999987
|
. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.18 Score=50.63 Aligned_cols=54 Identities=15% Similarity=0.078 Sum_probs=45.2
Q ss_pred CCEEEEEEecCCC--C----------h-----------------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHH
Q 001557 768 RKYVFVIAADCDT--T----------S-----------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELH 818 (1054)
Q Consensus 768 ~kkLiv~DiDGTL--~----------~-----------------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~ 818 (1054)
||+++++|+|+|| . . .+-+.+.+.|+.|+ + ++.++|+|.-+...+.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~----~~~l~I~Ts~~~~~~~ 75 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-E----LFELVVFTAGLRMYAD 75 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-h----ccEEEEEeCCcHHHHH
Confidence 5789999999999 1 0 23567888999997 3 6899999999999999
Q ss_pred HHHHhCCC
Q 001557 819 SLLVSGGL 826 (1054)
Q Consensus 819 ~~l~~l~l 826 (1054)
.+++.+++
T Consensus 76 ~il~~l~~ 83 (148)
T smart00577 76 PVLDLLDP 83 (148)
T ss_pred HHHHHhCc
Confidence 99999877
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=92.87 E-value=3 Score=47.30 Aligned_cols=195 Identities=16% Similarity=0.121 Sum_probs=110.8
Q ss_pred CCcceEEEEcCCCchHHHHHHHccCCC--CEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEE
Q 001557 304 PIWPVAIHGHYADAGDAAALLSGALNV--PMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIV 381 (1054)
Q Consensus 304 ~~~pDVIh~h~~~a~~~a~~l~~~~~i--P~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~V 381 (1054)
+-+||+|.+....+..++..+++..|- +.|+..+--. ..+..|+|
T Consensus 55 ~~~pdLiIsaGr~t~~~~~~l~r~~gg~~~~V~i~~P~~---------------------------------~~~~FDlv 101 (311)
T PF06258_consen 55 PPWPDLIISAGRRTAPAALALRRASGGRTKTVQIMDPRL---------------------------------PPRPFDLV 101 (311)
T ss_pred CCCCcEEEECCCchHHHHHHHHHHcCCCceEEEEcCCCC---------------------------------CccccCEE
Confidence 357999999998888888888887766 5666555210 14578999
Q ss_pred EecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEE---EeCCCCcCCCcccCCCCCCCcccccCCCCCCC
Q 001557 382 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMV---VIPPGIEFHHIVRHNGDVDGEVERDEGSPASP 458 (1054)
Q Consensus 382 i~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~---vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~ 458 (1054)
|+..++... .+ +++. ..||.|+.+......
T Consensus 102 i~p~HD~~~------~~------------------------~Nvl~t~ga~~~i~~~~l~~a~----------------- 134 (311)
T PF06258_consen 102 IVPEHDRLP------RG------------------------PNVLPTLGAPNRITPERLAEAA----------------- 134 (311)
T ss_pred EECcccCcC------CC------------------------CceEecccCCCcCCHHHHHHHH-----------------
Confidence 998764210 00 1332 233444433322100
Q ss_pred CCchhHHHhhhcCCCCCcEEEEEeCCCCCC--CHH---HHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHH
Q 001557 459 DPPIWSEIMHFFSNPRKPMILALARPDPKK--NIT---TLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSI 533 (1054)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~K--gi~---~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i 533 (1054)
.+...++...+...+.+.||.....- +-+ .+++.+..+.+... ..+ +|...+-.. .+....+
T Consensus 135 ----~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~-~vttSRRTp-------~~~~~~L 201 (311)
T PF06258_consen 135 ----AAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSL-LVTTSRRTP-------PEAEAAL 201 (311)
T ss_pred ----HhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeE-EEEcCCCCc-------HHHHHHH
Confidence 00012233334555667888755332 223 45555555533222 233 344444321 2334444
Q ss_pred HHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccC
Q 001557 534 LKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG 601 (1054)
Q Consensus 534 ~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg 601 (1054)
.+..+ -.+.+.+...-+.+=+..+|..| |.++++.- . =.-+.||+++|+||..-...+
T Consensus 202 ~~~~~---~~~~~~~~~~~~~nPy~~~La~a----d~i~VT~D--S-vSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 202 RELLK---DNPGVYIWDGTGENPYLGFLAAA----DAIVVTED--S-VSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred HHhhc---CCCceEEecCCCCCcHHHHHHhC----CEEEEcCc--c-HHHHHHHHHcCCCEEEecCCC
Confidence 44443 33566555665666799999999 99999943 2 223679999999998877655
|
The function of this family is unknown. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=92.87 E-value=0.21 Score=56.98 Aligned_cols=63 Identities=13% Similarity=0.044 Sum_probs=50.4
Q ss_pred CEEEEEEecCCC------Ch--------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHh----CCCCCCC
Q 001557 769 KYVFVIAADCDT------TS--------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVS----GGLSPLA 830 (1054)
Q Consensus 769 kkLiv~DiDGTL------~~--------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~----l~l~~~~ 830 (1054)
+|+|++|+|+|| +. ..-+.+.++|+.|++. |+.++|||..+...+...++. +++. ..
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~----Gi~lai~S~n~~~~a~~~l~~~~~~~~~~-~~ 77 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQ----GFLLALASKNDEDDAKKVFERRKDFILQA-ED 77 (320)
T ss_pred eEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhC----CCEEEEEcCCCHHHHHHHHHhCccccCcH-HH
Confidence 599999999999 11 2457899999999986 999999999999999999998 7763 22
Q ss_pred CcEEEE
Q 001557 831 FDAFIC 836 (1054)
Q Consensus 831 ~d~lI~ 836 (1054)
|+.+++
T Consensus 78 f~~~~~ 83 (320)
T TIGR01686 78 FDARSI 83 (320)
T ss_pred eeEEEE
Confidence 444433
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=92.81 E-value=0.12 Score=58.24 Aligned_cols=56 Identities=4% Similarity=-0.125 Sum_probs=48.3
Q ss_pred CCCEEEEEEecCCCC---------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 767 RRKYVFVIAADCDTT---------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL~---------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
.+.+++++|+|||+. ..+.+.+.++|+.|++. |+.++|+|||+.......++.+++
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~i~T~r~~~~~~~~l~~l~~ 226 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA----GYEIIVVSGRDGVCEEDTVEWLRQ 226 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC----CCEEEEEeCCChhhHHHHHHHHHH
Confidence 345899999999992 24678999999999986 899999999999999999988877
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=92.80 E-value=0.18 Score=52.01 Aligned_cols=54 Identities=7% Similarity=0.018 Sum_probs=45.1
Q ss_pred CEEEEEEecCCCC----hhhHHHHHHHHHHHhccCCCCceEEEEEcCCC-HHHHHHHHHhCCC
Q 001557 769 KYVFVIAADCDTT----SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT-ILELHSLLVSGGL 826 (1054)
Q Consensus 769 kkLiv~DiDGTL~----~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~-~~~i~~~l~~l~l 826 (1054)
-+++++|+|||++ ..+.+.+.++|+.|++. |+.++|+|+.+ ...+..+++.+++
T Consensus 25 v~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~----g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 25 IKGVVLDKDNTLVYPDHNEAYPALRDWIEELKAA----GRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCEEEEecCCccccCCCCCcChhHHHHHHHHHHc----CCEEEEEeCCchHHHHHHHHHHcCC
Confidence 4899999999993 35778899999999986 89999999988 5666677777776
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.16 Score=52.51 Aligned_cols=40 Identities=15% Similarity=0.163 Sum_probs=32.8
Q ss_pred EEEEEEecCCCCh-----------hhHHHHHHHHHHHhccCCCCceEEEEEcCCC
Q 001557 770 YVFVIAADCDTTS-----------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALT 813 (1054)
Q Consensus 770 kLiv~DiDGTL~~-----------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~ 813 (1054)
|++|+|.||||.. .+.+.+.++|+.|+++ |+.++|+|.-+
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~i~TN~~ 52 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKM----GYALVLVTNQS 52 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHC----CCEEEEEeCCc
Confidence 7899999999931 1346789999999986 89999999765
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.078 Score=55.65 Aligned_cols=45 Identities=16% Similarity=0.257 Sum_probs=41.3
Q ss_pred CCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecC
Q 001557 955 ASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKG 1002 (1054)
Q Consensus 955 asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgN 1002 (1054)
.+|+.+++.+++++|++++++++ +||+.+ | ++|++.+|.++|+..
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-~~~a~~ag~~~a~~~ 190 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVA-VGDSKN-D-LPMFEVADISISLGD 190 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEE-EcCCHh-H-HHHHHhcCCeEEECC
Confidence 47999999999999999999988 889988 9 999999999999964
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.29 E-value=0.63 Score=58.24 Aligned_cols=52 Identities=17% Similarity=0.098 Sum_probs=48.6
Q ss_pred EEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 771 VFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 771 Liv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
++++.+||.+ ...+.+..++++++|++. |+.+++.||=+...++.+.+++|+
T Consensus 519 ~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~----Gi~~~mLTGDn~~~A~~iA~~lGI 576 (713)
T COG2217 519 VVFVAVDGKLVGVIALADELRPDAKEAIAALKAL----GIKVVMLTGDNRRTAEAIAKELGI 576 (713)
T ss_pred EEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCh
Confidence 7999999977 578999999999999997 999999999999999999999998
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=92.20 E-value=0.63 Score=49.56 Aligned_cols=45 Identities=7% Similarity=-0.052 Sum_probs=37.8
Q ss_pred cCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 952 PVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 952 p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
...-.|...++++++++|++++++++ +||+.+ | +.+-..+|..++
T Consensus 135 ~~~Kp~p~~~~~~~~~~~~~~~~~~~-iGDs~~-D-i~aa~~aG~~~i 179 (214)
T PRK13288 135 EHAKPDPEPVLKALELLGAKPEEALM-VGDNHH-D-ILAGKNAGTKTA 179 (214)
T ss_pred CCCCCCcHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEE
Confidence 34445788999999999999999998 999988 9 999988887554
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.02 E-value=0.71 Score=60.14 Aligned_cols=43 Identities=14% Similarity=0.057 Sum_probs=39.5
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
...+.+.++++|+.+++. ||.+..+||=....+..+.+++|+.
T Consensus 545 ~Dppr~~v~~aI~~l~~A----GI~v~MiTGD~~~TA~aIa~~~Gi~ 587 (917)
T COG0474 545 EDPPREDVKEAIEELREA----GIKVWMITGDHVETAIAIAKECGIE 587 (917)
T ss_pred cCCCCccHHHHHHHHHHC----CCcEEEECCCCHHHHHHHHHHcCCC
Confidence 467888999999999997 9999999999999999999999984
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=91.91 E-value=0.091 Score=53.69 Aligned_cols=90 Identities=18% Similarity=0.217 Sum_probs=58.1
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc--------cceeeCCceEEe
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV--------DIHRVLDNGLLV 615 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~--------eiv~~~~~Gllv 615 (1054)
.+|.+.++. +++..+|+.| |++|.- +-+.|+.|++++|+|.|.-...... ..+.....|+.+
T Consensus 55 ~~v~~~~~~--~~m~~~m~~a----DlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~ 124 (167)
T PF04101_consen 55 PNVKVFGFV--DNMAELMAAA----DLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML 124 (167)
T ss_dssp CCCEEECSS--SSHHHHHHHH----SEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred CcEEEEech--hhHHHHHHHc----CEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence 567788874 5799999999 988853 3358999999999999887665521 112222334444
Q ss_pred CC--CCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001557 616 DP--HDQQSIADALLKLVSDKQLWERCRQN 643 (1054)
Q Consensus 616 ~p--~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1054)
.. .+++.|.++|.+++.++....++.++
T Consensus 125 ~~~~~~~~~L~~~i~~l~~~~~~~~~~~~~ 154 (167)
T PF04101_consen 125 DESELNPEELAEAIEELLSDPEKLKEMAKA 154 (167)
T ss_dssp ECCC-SCCCHHHHHHCHCCCHH-SHHHCCC
T ss_pred CcccCCHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 32 23678999999999998875555444
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=91.42 E-value=0.4 Score=57.62 Aligned_cols=48 Identities=23% Similarity=0.225 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcE
Q 001557 786 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSE 841 (1054)
Q Consensus 786 ~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~ 841 (1054)
+...+.+++++++ |..++|+|+.+...++.+++.+|+ ||.+||+++..
T Consensus 75 pga~e~L~~lk~~----G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~ 122 (479)
T PRK08238 75 EEVLDYLRAERAA----GRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTT 122 (479)
T ss_pred hhHHHHHHHHHHC----CCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCcc
Confidence 6778899999886 999999999999999999999997 68899988754
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.96 Score=52.50 Aligned_cols=41 Identities=7% Similarity=0.050 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEe
Q 001557 957 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 1000 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaM 1000 (1054)
+...+.+.++++|++++++++ +||+.. | +..=+.+|..++.
T Consensus 274 ~Peifl~A~~~lgl~Peecl~-IGDS~~-D-IeAAk~AGm~~Ig 314 (381)
T PLN02575 274 DPEMFIYAAQLLNFIPERCIV-FGNSNQ-T-VEAAHDARMKCVA 314 (381)
T ss_pred CHHHHHHHHHHcCCCcccEEE-EcCCHH-H-HHHHHHcCCEEEE
Confidence 567888999999999999999 899888 8 8888888865444
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.00 E-value=0.53 Score=47.40 Aligned_cols=57 Identities=9% Similarity=-0.016 Sum_probs=51.6
Q ss_pred CCCEEEEEEecCCC----ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 767 RRKYVFVIAADCDT----TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL----~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
.-.|-|++|+|.|| ....+++.++-+..+++. |+.++|.|-.+..-+..+.+.++++
T Consensus 26 ~Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~----gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 26 HGIKGVILDLDNTLVPWDNPDATPELRAWLAELKEA----GIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred cCCcEEEEeccCceecccCCCCCHHHHHHHHHHHhc----CCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 34589999999999 577999999999999997 9999999999999999999999994
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=90.95 E-value=0.33 Score=58.95 Aligned_cols=92 Identities=16% Similarity=0.171 Sum_probs=55.9
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccC----cccceeeCCceEEeCCC-
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVDIHRVLDNGLLVDPH- 618 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg----~~eiv~~~~~Gllv~p~- 618 (1054)
.++...+++|+.+ +++.. +.++||. =|--.++.||+.+|+|+|+-+.-| ....+...+.|+.++..
T Consensus 323 ~n~~~~~W~PQ~~---lL~hp--~v~~fit----HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~ 393 (500)
T PF00201_consen 323 KNVLIVKWLPQND---LLAHP--RVKLFIT----HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKND 393 (500)
T ss_dssp TTEEEESS--HHH---HHTST--TEEEEEE----S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC
T ss_pred ceEEEeccccchh---hhhcc--cceeeee----ccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecC
Confidence 4678889998864 45443 1145552 233468999999999999987533 12233344568877644
Q ss_pred -CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 001557 619 -DQQSIADALLKLVSDKQLWERCRQNGLKNI 648 (1054)
Q Consensus 619 -d~~~la~aI~~ll~d~~~~~~~~~~~~~~v 648 (1054)
+.+++.+||.++++|+. +++++.+..
T Consensus 394 ~~~~~l~~ai~~vl~~~~----y~~~a~~ls 420 (500)
T PF00201_consen 394 LTEEELRAAIREVLENPS----YKENAKRLS 420 (500)
T ss_dssp -SHHHHHHHHHHHHHSHH----HHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhhH----HHHHHHHHH
Confidence 56899999999999875 344444443
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=90.72 E-value=28 Score=38.27 Aligned_cols=140 Identities=15% Similarity=0.088 Sum_probs=76.4
Q ss_pred EEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHH-----------HHHcCCC--CC
Q 001557 479 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKL-----------IDKYDLY--GQ 545 (1054)
Q Consensus 479 l~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l-----------~~~~~l~--~~ 545 (1054)
+++||....||...+++.-+...+ + +++.-++-+-+-... .-.|... +++..+. ..
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK--~-~~~~t~~~GierS~A--------~~~i~d~~~~~~y~~~~~~~~~~~~pN~~ 255 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILK--P-AGFKTIMEGIERSPA--------KISIKDHGIPYEYYPKLDCDEPKPAPNSP 255 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTT--T-TT-EEEEE---SSTH--------HHHHHHTT--EEEE-CTGGGG---SSS--
T ss_pred eeeeeeeeecCcHHHhhhHHHhcC--C-cchhHHhhhhhcCCc--------eeeeecCCcccccCccccccCcccCCCCc
Confidence 899999999999999999988743 3 677766655432111 0111111 1122222 23
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecC------CCCCCcHHHHHHHHcCC-CEEEccccCccc-------ceeeCCc
Q 001557 546 VAYPKHHKQSDVPDIYRLAAKTKGVFINPA------FIEPFGLTLIEAAAYGL-PIVATKNGGPVD-------IHRVLDN 611 (1054)
Q Consensus 546 V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps------~~Egfgl~l~EAmA~G~-PVIat~~Gg~~e-------iv~~~~~ 611 (1054)
+-.+|..=.+|..+.++.+ .+...-+ +.+.+-.+-+|..|||+ ||.-...|..-. ++.....
T Consensus 256 ~~v~~~Yi~~E~~~~Maks----~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~ 331 (355)
T PF11440_consen 256 VPVYGPYIRSEGLERMAKS----LFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYS 331 (355)
T ss_dssp EEEESS--HHHHHHHHHTE----EEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S
T ss_pred ceecchhhhHHHHHHHhhc----cceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcc
Confidence 5566766677888888888 5554333 23568899999999997 555555554322 2223345
Q ss_pred eEEeCCCCHHHHHHHHHHHHhC
Q 001557 612 GLLVDPHDQQSIADALLKLVSD 633 (1054)
Q Consensus 612 Gllv~p~d~~~la~aI~~ll~d 633 (1054)
.+.++..|.++-.+.|.++.++
T Consensus 332 ~I~~De~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 332 AIYFDENDLESTVEKLIEVANN 353 (355)
T ss_dssp -EEE-TTSHHHHHHHHHHHHT-
T ss_pred eeEeccchHHHHHHHHHHHhcc
Confidence 7889989999888888877654
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=90.54 E-value=0.41 Score=49.42 Aligned_cols=55 Identities=13% Similarity=0.072 Sum_probs=41.0
Q ss_pred CCEEEEEEecCCCC----------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHH--------HHHHHHHhCCC
Q 001557 768 RKYVFVIAADCDTT----------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL--------ELHSLLVSGGL 826 (1054)
Q Consensus 768 ~kkLiv~DiDGTL~----------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~--------~i~~~l~~l~l 826 (1054)
..|+|++|.||||. -.+-+.++++|++|++. |+.++|+|+-+.. .+...++.+|+
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~ 75 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN----HIKIFSFTNQPGIADGIATIADFVQELKGFGF 75 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC----CCEEEEEECCchhcCCcCCHHHHHHHHHhCCc
Confidence 45899999999992 12457889999999986 8999999986531 23444666666
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=90.35 E-value=0.17 Score=53.24 Aligned_cols=48 Identities=23% Similarity=0.138 Sum_probs=42.8
Q ss_pred ecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 951 IPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 951 ~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
...+-.|..+++.++++.+++++++++ +||+.+ | ++|++.+|.++++.
T Consensus 150 ~~~g~~K~~~l~~~~~~~~~~~~~~~~-~gDs~~-D-~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 150 NCKGEGKVHALAELLAEEQIDLKDSYA-YGDSIS-D-LPLLSLVGHPYVVN 197 (202)
T ss_pred CCCChHHHHHHHHHHHHcCCCHHHcEe-eeCCcc-c-HHHHHhCCCcEEeC
Confidence 345678999999999999999999999 788888 9 99999999999885
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=90.06 E-value=42 Score=38.72 Aligned_cols=105 Identities=11% Similarity=0.093 Sum_probs=60.8
Q ss_pred CCcEEEEEeCCCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 474 RKPMILALARPDPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 474 ~~~~Il~vgRld~~Kgi~--~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
+..++++.|.-.+.|..+ ...+.+..+.+ ....+ +++|+..+.+ ......+.+.......+.+.|.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~v-vl~ggp~e~e---------~~~~~~i~~~~~~~~~~~l~g~ 250 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEV-VLTSGPDKDD---------LACVNEIAQGCQTPPVTALAGK 250 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeE-EEEcCCChHH---------HHHHHHHHHhcCCCccccccCC
Confidence 344566777656667654 55555555532 23344 3444432111 1112223332222234667888
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 599 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~ 599 (1054)
.+-.++.++++.| +++|-.- . -.+-=|.|.|+|+|+-.-
T Consensus 251 ~sL~el~ali~~a----~l~v~nD---S--Gp~HlAaA~g~P~v~lfG 289 (352)
T PRK10422 251 TTFPELGALIDHA----QLFIGVD---S--APAHIAAAVNTPLICLFG 289 (352)
T ss_pred CCHHHHHHHHHhC----CEEEecC---C--HHHHHHHHcCCCEEEEEC
Confidence 8889999999999 9999652 2 234446788999998653
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=90.03 E-value=0.46 Score=50.94 Aligned_cols=37 Identities=14% Similarity=0.100 Sum_probs=28.7
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
.|..+++ +++.+.+++++ +||+.+ | +.|.+.+|..++
T Consensus 148 ~K~~~l~----~~~~~~~~~i~-iGDs~~-D-i~aa~~Ag~~~a 184 (219)
T PRK09552 148 CKPSLIR----KLSDTNDFHIV-IGDSIT-D-LEAAKQADKVFA 184 (219)
T ss_pred chHHHHH----HhccCCCCEEE-EeCCHH-H-HHHHHHCCccee
Confidence 4666554 45777888888 899999 9 999999988555
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=89.88 E-value=1.4 Score=47.05 Aligned_cols=42 Identities=14% Similarity=0.123 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhCCCccCEEEEeCcCC-CccccccccCcceE-EEec
Q 001557 957 RSQALRYLHVRWGIDLSNVVVIAGECG-DTDYEGLLGGVHKT-VILK 1001 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~~e~vvaf~GD~~-d~D~~eML~~ag~g-VaMg 1001 (1054)
+......+++++|++++++++ +||+. + | +..=+.+|.. |.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-igDs~~~-d-i~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPEEAVM-VGDRLDK-D-IKGAKNLGMKTVWIN 195 (221)
T ss_pred CHHHHHHHHHHcCCChhhEEE-ECCChHH-H-HHHHHHCCCEEEEEC
Confidence 456889999999999999988 88886 6 7 8888888864 4443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.59 E-value=0.55 Score=54.05 Aligned_cols=55 Identities=15% Similarity=0.097 Sum_probs=43.3
Q ss_pred CEEEEEEecCCCCh--------------hhHHHHHHHHHHHhccCCCCceEEEEEcCC---------------CHHHHHH
Q 001557 769 KYVFVIAADCDTTS--------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTAL---------------TILELHS 819 (1054)
Q Consensus 769 kkLiv~DiDGTL~~--------------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR---------------~~~~i~~ 819 (1054)
+|++|||.||||.. .+-+.+.++|..|+++ |+.++|+|.- +...+..
T Consensus 2 ~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~----G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~ 77 (354)
T PRK05446 2 QKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKA----GYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQ 77 (354)
T ss_pred CcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhC----CCeEEEEECCccccCccccHHHHhhHHHHHHH
Confidence 68999999999932 3456689999999886 8999999983 3445677
Q ss_pred HHHhCCCC
Q 001557 820 LLVSGGLS 827 (1054)
Q Consensus 820 ~l~~l~l~ 827 (1054)
+++.+++.
T Consensus 78 iL~~~gl~ 85 (354)
T PRK05446 78 IFESQGIK 85 (354)
T ss_pred HHHHcCCc
Confidence 88888883
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=89.50 E-value=1 Score=48.90 Aligned_cols=36 Identities=11% Similarity=-0.044 Sum_probs=28.2
Q ss_pred HHHHHHHHhccCCCCceEEEEEcCCC----HHHHHHHHHhCCCC
Q 001557 788 IKKVVEAAGKDNSAGFIGFVLSTALT----ILELHSLLVSGGLS 827 (1054)
Q Consensus 788 ~~~al~~l~~~~~~~gi~fvIaTGR~----~~~i~~~l~~l~l~ 827 (1054)
.+++|+.++++ |+.++++|||+ ...+..+++.+|++
T Consensus 119 a~elL~~L~~~----G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 119 ARQLIDMHVKR----GDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred HHHHHHHHHHC----CCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 78889999886 89999999996 33555666668883
|
|
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=89.02 E-value=5 Score=44.22 Aligned_cols=152 Identities=20% Similarity=0.250 Sum_probs=86.1
Q ss_pred eC-CCCCCCHHHHHHHHHhcccccCCCcEEE---EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCC------C
Q 001557 482 AR-PDPKKNITTLVKAFGECRPLRELANLTL---IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPK------H 551 (1054)
Q Consensus 482 gR-ld~~Kgi~~ll~A~~~l~~~~~~~~l~L---IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g------~ 551 (1054)
+| ++...|+..++.++..+..... .+++ ++..-+ +..+..+.++-+|.+.-...+ +
T Consensus 234 sR~pea~~nl~~il~slcal~~~~a--~vvfw~ai~~~lp------------l~~l~~l~e~~gWq~~ad~~~kdnc~l~ 299 (412)
T COG4370 234 SRVPEAQTNLAVILGSLCALPAMFA--LVVFWAAIAPELP------------LLLLWTLEERQGWQPLADRFGKDNCSLW 299 (412)
T ss_pred CCChHHHhhHHHHHHHHhhhHHHHH--HHHHHhccCcCCC------------HHHHHHHHHhcCcchhhhhhccCceEEE
Confidence 45 5567899998887766643211 2222 222222 233444555555543222111 2
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCC-cHHHHHHHHcCCCEEEccccCcccce-------e-eCCceEEeCCCCHHH
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPF-GLTLIEAAAYGLPIVATKNGGPVDIH-------R-VLDNGLLVDPHDQQS 622 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egf-gl~l~EAmA~G~PVIat~~Gg~~eiv-------~-~~~~Gllv~p~d~~~ 622 (1054)
+++....+++..| |+.+ +| |...=.|.-.|+|||+...-|+.=.- . -+..-++++|. .+.
T Consensus 300 lsqqsfadiLH~a----daal------gmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~~-aq~ 368 (412)
T COG4370 300 LSQQSFADILHAA----DAAL------GMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRPE-AQA 368 (412)
T ss_pred EeHHHHHHHHHHH----HHHH------HhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCCc-hhh
Confidence 3466788999999 7755 33 33344467779999999866653110 0 02223566653 333
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHH
Q 001557 623 IADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCK 658 (1054)
Q Consensus 623 la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~ 658 (1054)
-+.+..+++.|++..+.++.|+.+++ +.=.-..+++
T Consensus 369 a~~~~q~ll~dp~r~~air~nGqrRiGqaGaa~rIAe 405 (412)
T COG4370 369 AAQAVQELLGDPQRLTAIRHNGQRRIGQAGAARRIAE 405 (412)
T ss_pred HHHHHHHHhcChHHHHHHHhcchhhccCcchHHHHHH
Confidence 33444449999999999999999998 5433333333
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=88.79 E-value=1.2 Score=48.78 Aligned_cols=67 Identities=18% Similarity=0.134 Sum_probs=50.3
Q ss_pred CCCEEEEEEecCCC-C----hh-hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcC
Q 001557 767 RRKYVFVIAADCDT-T----SD-FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL-~----~~-i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~n 838 (1054)
....+||||+|.|| + .+ ..+.+.+.|..|++. +-+.+..++|-. ..+..-++++++. .-||.+||.+
T Consensus 120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~---g~vLvLWSyG~~-eHV~~sl~~~~L~-~~Fd~ii~~G 192 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQ---GCVLVLWSYGNR-EHVRHSLKELKLE-GYFDIIICGG 192 (297)
T ss_pred CCCcEEEEECCCcccccCCccccCChHHHHHHHHHHHc---CCEEEEecCCCH-HHHHHHHHHhCCc-cccEEEEeCC
Confidence 45689999999999 2 12 457888999999997 447776777764 5556778888886 5589888843
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=88.63 E-value=0.67 Score=52.91 Aligned_cols=66 Identities=8% Similarity=-0.018 Sum_probs=45.3
Q ss_pred EEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEE---cCCCHHHHHHHH-HhCCCCCCCCcEEEEc
Q 001557 771 VFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLS---TALTILELHSLL-VSGGLSPLAFDAFICN 837 (1054)
Q Consensus 771 Liv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIa---TGR~~~~i~~~l-~~l~l~~~~~d~lI~~ 837 (1054)
.|+||+|||| ...+.+...++++.++.....-|+.+++. +|++.......+ +.+|++. .++-++++
T Consensus 2 ~~ifD~DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~-~~~~i~~s 73 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV-SPLQVIQS 73 (321)
T ss_pred EEEEeCcCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC-CHHHHHhh
Confidence 5899999999 56778999999999986210115555554 578888876665 8888863 33334443
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=88.52 E-value=0.22 Score=51.07 Aligned_cols=42 Identities=21% Similarity=0.257 Sum_probs=36.7
Q ss_pred EecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCc
Q 001557 950 VIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV 994 (1054)
Q Consensus 950 V~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~a 994 (1054)
..|.+.+|+.+++.+++.+|++++++++ +||+.+ | ++|++.+
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~-iGDs~~-D-~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIA-VGDSVN-D-LPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEE-EeCCHH-H-HHHHhcC
Confidence 3567889999999999999999999988 888888 8 9998764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=87.90 E-value=0.85 Score=47.11 Aligned_cols=40 Identities=10% Similarity=0.057 Sum_probs=30.5
Q ss_pred cCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceE
Q 001557 952 PVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKT 997 (1054)
Q Consensus 952 p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~g 997 (1054)
+.+..|+..++.+...+ ++++++ +||+.+ | +++.+.++.-
T Consensus 145 ~~g~~K~~~~~~~~~~~---~~~~i~-iGD~~~-D-~~aa~~~d~~ 184 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---YQHIIY-IGDGVT-D-VCPAKLSDVV 184 (188)
T ss_pred CCCCCHHHHHHHHHhhc---CceEEE-ECCCcc-h-hchHhcCCcc
Confidence 56677999999888765 566666 899999 9 8888777543
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=87.63 E-value=0.63 Score=45.66 Aligned_cols=117 Identities=24% Similarity=0.214 Sum_probs=60.6
Q ss_pred CCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCC-CCCccc
Q 001557 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFG-PKDKYV 268 (1054)
Q Consensus 190 tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g-~~~~~l 268 (1054)
++|...-...|+++|.++ | |+|.+.|... +.+. + ...|+.++.++.. +.....
T Consensus 8 t~Ghv~P~lala~~L~~r-G-h~V~~~~~~~--------~~~~---------------v-~~~Gl~~~~~~~~~~~~~~~ 61 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRR-G-HEVRLATPPD--------FRER---------------V-EAAGLEFVPIPGDSRLPRSL 61 (139)
T ss_dssp SHHHHHHHHHHHHHHHHT-T--EEEEEETGG--------GHHH---------------H-HHTT-EEEESSSCGGGGHHH
T ss_pred ChhHHHHHHHHHHHHhcc-C-CeEEEeeccc--------ceec---------------c-cccCceEEEecCCcCcCccc
Confidence 389999999999999999 8 9999998631 1111 1 2348888887765 111100
Q ss_pred -ccccCCCChHHHHHHHHHHHHHHHHHHhhhh-----cCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCC
Q 001557 269 -QKELLWPHIPEFVDAALTHIIQISKVLGEQV-----GSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSL 339 (1054)
Q Consensus 269 -~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~-----~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l 339 (1054)
....+.. +... ...+.+..+.+.+.. ..+....+|++.++. ....+..++..+++|.+.+....
T Consensus 62 ~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 62 EPLANLRR----LARL-IRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAP--LAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp HHHHHHHC----HHHH-HHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHH--HHTHHHHHHHHHTS-EEEEESSG
T ss_pred chhhhhhh----HHHH-hhhhhHHHHHhhccCcchhhhccCcccchHHHhhh--hcCccceeEhhhCchHHHHhhCC
Confidence 1111111 1111 111222222222211 112223455554332 34566778888999999887754
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=87.50 E-value=1.8 Score=47.90 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 957 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
+...+.+.++++|++++++++ +||+.. | +..=..+|..++
T Consensus 167 ~Pe~~~~a~~~l~~~p~~~l~-IgDs~~-D-i~aA~~aG~~~i 206 (260)
T PLN03243 167 DPEMFMYAAERLGFIPERCIV-FGNSNS-S-VEAAHDGCMKCV 206 (260)
T ss_pred CHHHHHHHHHHhCCChHHeEE-EcCCHH-H-HHHHHHcCCEEE
Confidence 456888999999999999999 999988 8 888888887554
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=87.33 E-value=1.4 Score=48.43 Aligned_cols=55 Identities=13% Similarity=0.000 Sum_probs=41.8
Q ss_pred CEEEEEEecCCC--C----------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCH---H
Q 001557 769 KYVFVIAADCDT--T----------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTI---L 815 (1054)
Q Consensus 769 kkLiv~DiDGTL--~----------------------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~---~ 815 (1054)
+-+++||||.|+ + ....+.+.+..+.+++. |+.+++.|||+- .
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~----G~kIf~VSgR~e~~r~ 176 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSL----GFKIIFLSGRLKDKQA 176 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHC----CCEEEEEeCCchhHHH
Confidence 478999999998 0 11245677888888886 999999999974 3
Q ss_pred HHHHHHHhCCCC
Q 001557 816 ELHSLLVSGGLS 827 (1054)
Q Consensus 816 ~i~~~l~~l~l~ 827 (1054)
.....|...|++
T Consensus 177 aT~~NL~kaGy~ 188 (275)
T TIGR01680 177 VTEANLKKAGYH 188 (275)
T ss_pred HHHHHHHHcCCC
Confidence 456677888884
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.84 E-value=5.6 Score=49.55 Aligned_cols=89 Identities=18% Similarity=0.200 Sum_probs=55.6
Q ss_pred cHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 922 PVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 922 ~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
.-+++.+.++.+ .+.-+.++.+...+=|+- =|++.| ++|+..||+-| | -+-|+.++.|||||
T Consensus 670 ~~~qld~il~nh-~eIVFARTSPqQKLiIVe-----------~cQr~G----aiVaVTGDGVN-D-sPALKKADIGVAMG 731 (1019)
T KOG0203|consen 670 SSEQLDELLQNH-QEIVFARTSPQQKLIIVE-----------GCQRQG----AIVAVTGDGVN-D-SPALKKADIGVAMG 731 (1019)
T ss_pred CHHHHHHHHHhC-CceEEEecCccceEEeEh-----------hhhhcC----cEEEEeCCCcC-C-Chhhcccccceeec
Confidence 345677777654 334445555543444432 155555 57887999999 9 99999999999999
Q ss_pred CcchhH-HhhhhccCCCcccccccCCCceEEeccccC
Q 001557 1002 GVGESA-RKLHANRNYSLEDVISFDSHNVIQVDEACD 1037 (1054)
Q Consensus 1002 Na~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~ 1037 (1054)
=|. | .-++++| ++=.|...+..|| +++
T Consensus 732 iaG--SDvsKqAAD------mILLDDNFASIVt-GVE 759 (1019)
T KOG0203|consen 732 IAG--SDVSKQAAD------MILLDDNFASIVT-GVE 759 (1019)
T ss_pred ccc--chHHHhhcc------eEEecCcchhhee-ecc
Confidence 666 5 3345554 3444444455553 443
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=86.72 E-value=0.44 Score=48.49 Aligned_cols=53 Identities=15% Similarity=0.088 Sum_probs=36.5
Q ss_pred EEEEEEecCCC--C-------------hhhHHHHHHHHHHHhccCCCCceEEEEEc-----CC--CH-------HHHHHH
Q 001557 770 YVFVIAADCDT--T-------------SDFLEIIKKVVEAAGKDNSAGFIGFVLST-----AL--TI-------LELHSL 820 (1054)
Q Consensus 770 kLiv~DiDGTL--~-------------~~i~~~~~~al~~l~~~~~~~gi~fvIaT-----GR--~~-------~~i~~~ 820 (1054)
|+.+||+|||| + .-+.+.+.++|+++.++ |..+||.| |+ .. .-+..+
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~----Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~i 76 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK----GYKIVIVTNQSGIGRGMGEKDLENFHEKIENI 76 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT----TEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc----CCeEEEEeCccccccccccchHHHHHHHHHHH
Confidence 68999999999 1 11455789999999886 88888887 55 11 233456
Q ss_pred HHhCCC
Q 001557 821 LVSGGL 826 (1054)
Q Consensus 821 l~~l~l 826 (1054)
++.+++
T Consensus 77 l~~l~i 82 (159)
T PF08645_consen 77 LKELGI 82 (159)
T ss_dssp HHHCTS
T ss_pred HHHcCC
Confidence 777777
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=86.58 E-value=2.9 Score=55.82 Aligned_cols=42 Identities=14% Similarity=-0.009 Sum_probs=38.2
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...+.+.+.++++++++. |+.+.+.||-....+..+..++++
T Consensus 724 ~D~lr~~v~~~I~~l~~a----gi~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 724 EDKLQQGVPEAIESLRTA----GIKVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred ecCCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHhCC
Confidence 456788899999999986 999999999999999999999998
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=86.44 E-value=0.67 Score=49.22 Aligned_cols=54 Identities=13% Similarity=0.241 Sum_probs=40.9
Q ss_pred CCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCC
Q 001557 953 VLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNY 1016 (1054)
Q Consensus 953 ~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~ 1016 (1054)
..-.|...++.+ +..|. ++++ +||+.| | +.|++.+|.+|+|. ..+.+...++.+
T Consensus 129 ~~~~K~~~l~~l-~~~~~---~~v~-vGDs~n-D-l~ml~~Ag~~ia~~---ak~~~~~~~~~~ 182 (203)
T TIGR02137 129 QKDPKRQSVIAF-KSLYY---RVIA-AGDSYN-D-TTMLSEAHAGILFH---APENVIREFPQF 182 (203)
T ss_pred CcchHHHHHHHH-HhhCC---CEEE-EeCCHH-H-HHHHHhCCCCEEec---CCHHHHHhCCCC
Confidence 345799999988 45664 5776 899999 9 99999999999997 334555555543
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=86.18 E-value=0.77 Score=47.14 Aligned_cols=53 Identities=9% Similarity=0.045 Sum_probs=36.9
Q ss_pred EEEEEEecCCC------Ch----------------------hhHHHHHHHHHHHhccCCCCceEEEEEcCC-CHHHHHHH
Q 001557 770 YVFVIAADCDT------TS----------------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTAL-TILELHSL 820 (1054)
Q Consensus 770 kLiv~DiDGTL------~~----------------------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR-~~~~i~~~ 820 (1054)
||||||+|+|| +. .+-+.+..+|+.|++. |+.+++||-- .+.-++++
T Consensus 4 klvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~----gv~lavASRt~~P~~A~~~ 79 (169)
T PF12689_consen 4 KLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKER----GVKLAVASRTDEPDWAREL 79 (169)
T ss_dssp SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHC----T--EEEEE--S-HHHHHHH
T ss_pred cEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHC----CCEEEEEECCCChHHHHHH
Confidence 89999999999 11 2346778899999986 9999999854 46788999
Q ss_pred HHhCCC
Q 001557 821 LVSGGL 826 (1054)
Q Consensus 821 l~~l~l 826 (1054)
|+.+++
T Consensus 80 L~~l~i 85 (169)
T PF12689_consen 80 LKLLEI 85 (169)
T ss_dssp HHHTT-
T ss_pred HHhcCC
Confidence 999888
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.14 E-value=5.2 Score=42.69 Aligned_cols=44 Identities=9% Similarity=-0.069 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcce-EEEecCc
Q 001557 957 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKGV 1003 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~-gVaMgNa 1003 (1054)
+.......++++|++++++++ +||+-. | +..=..+|. .|++.+.
T Consensus 140 ~p~~~~~~~~~~g~~p~~~l~-igDs~~-d-i~aA~~aG~~~i~v~~~ 184 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQECVV-VEDAPA-G-VLSGLAAGCHVIAVNAP 184 (218)
T ss_pred CcHHHHHHHHHcCCCcccEEE-Eecchh-h-hHHHHHCCCEEEEECCC
Confidence 456777888999999999998 888888 8 888888885 5666543
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=85.02 E-value=0.75 Score=49.80 Aligned_cols=56 Identities=11% Similarity=0.014 Sum_probs=42.7
Q ss_pred CCEEEEEEecCCC-C----------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHH---
Q 001557 768 RKYVFVIAADCDT-T----------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL--- 815 (1054)
Q Consensus 768 ~kkLiv~DiDGTL-~----------------------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~--- 815 (1054)
.+..++||||.|+ + ....+...+.++.+++. |+.|+++|||+-.
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~----G~~V~~iT~R~~~~r~ 146 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSR----GVKVFFITGRPESQRE 146 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHT----TEEEEEEEEEETTCHH
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHC----CCeEEEEecCCchhHH
Confidence 4578999999997 1 22344577899999987 9999999999654
Q ss_pred HHHHHHHhCCCC
Q 001557 816 ELHSLLVSGGLS 827 (1054)
Q Consensus 816 ~i~~~l~~l~l~ 827 (1054)
.....|...|+.
T Consensus 147 ~T~~nL~~~G~~ 158 (229)
T PF03767_consen 147 ATEKNLKKAGFP 158 (229)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHcCCC
Confidence 555677777873
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.98 E-value=0.98 Score=48.60 Aligned_cols=45 Identities=16% Similarity=0.138 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEE
Q 001557 786 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFI 835 (1054)
Q Consensus 786 ~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI 835 (1054)
+.+.++|..|+++ |+.++++|+.+...+...++.+|+. ..|+.+|
T Consensus 89 pGv~~~l~~L~~~----~i~~avaS~s~~~~~~~~L~~~gl~-~~f~~~v 133 (221)
T COG0637 89 PGVVELLEQLKAR----GIPLAVASSSPRRAAERVLARLGLL-DYFDVIV 133 (221)
T ss_pred ccHHHHHHHHHhc----CCcEEEecCChHHHHHHHHHHccCh-hhcchhc
Confidence 3445667777775 6888888888888888888888874 2344443
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=84.83 E-value=0.83 Score=47.37 Aligned_cols=38 Identities=8% Similarity=0.026 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 786 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 786 ~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
+.+.+.|+.++++ |+.++|+||-+...+..+++.++++
T Consensus 92 ~~~~e~i~~~~~~----~~~v~IvS~~~~~~i~~~~~~~~i~ 129 (192)
T PF12710_consen 92 PDAMELIRELKDN----GIKVVIVSGSPDEIIEPIAERLGID 129 (192)
T ss_dssp TTHHHHHHHHHHT----TSEEEEEEEEEHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHHC----CCEEEEECCCcHHHHHHHHHHcCCC
Confidence 4556888888876 8999999999999999999999883
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=84.33 E-value=3.7 Score=54.68 Aligned_cols=42 Identities=14% Similarity=0.016 Sum_probs=38.1
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...+-+.+.++|+.+++. ||.+.+.||=....+..+..++|+
T Consensus 629 eD~lq~~v~etI~~L~~A----GIkv~mlTGD~~~TA~~IA~~~~i 670 (1057)
T TIGR01652 629 EDKLQEGVPETIELLRQA----GIKIWVLTGDKVETAINIGYSCRL 670 (1057)
T ss_pred hhhhhhccHHHHHHHHHC----CCeEEEEcCCcHHHHHHHHHHhCC
Confidence 356778889999999996 999999999999999999999998
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=84.19 E-value=2.1 Score=50.01 Aligned_cols=56 Identities=9% Similarity=0.115 Sum_probs=47.0
Q ss_pred cCCCEEEEEEecCCC-------C------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCC
Q 001557 766 RRRKYVFVIAADCDT-------T------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGG 825 (1054)
Q Consensus 766 ~~~kkLiv~DiDGTL-------~------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~ 825 (1054)
...+|.+|+|+|+|| + ...-...++.|+.+.++ |+.++|||=-+...+++.+...+
T Consensus 219 g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kq----GVlLav~SKN~~~da~evF~khp 293 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQ----GVLLAVCSKNTEKDAKEVFRKHP 293 (574)
T ss_pred CcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhc----cEEEEEecCCchhhHHHHHhhCC
Confidence 366799999999999 1 34556788889999987 99999999999999999987643
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=83.95 E-value=1.3 Score=46.94 Aligned_cols=39 Identities=18% Similarity=0.078 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 784 i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
+.+.+.++|+.+++. + .++|+||-....+.++++.+|++
T Consensus 69 l~pga~ell~~lk~~----~-~~~IVS~~~~~~~~~il~~lgi~ 107 (203)
T TIGR02137 69 PLEGAVEFVDWLRER----F-QVVILSDTFYEFSQPLMRQLGFP 107 (203)
T ss_pred CCccHHHHHHHHHhC----C-eEEEEeCChHHHHHHHHHHcCCc
Confidence 344556677777764 4 78899999999999999999984
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=83.31 E-value=19 Score=43.42 Aligned_cols=133 Identities=13% Similarity=0.178 Sum_probs=74.1
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCC--chhhhhchHHHHHHHHHHHHHcCCCCCEEeC
Q 001557 474 RKPMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDD--IDEMSGTNAALLLSILKLIDKYDLYGQVAYP 549 (1054)
Q Consensus 474 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~--~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~ 549 (1054)
+..+.+++|... ..+-+..+..+++.+. ..+.+++.+... .+.+. . ...++. .+++.+.
T Consensus 275 ~sVVyvSfGS~~~~~~~q~~ela~~l~~~~-----~~flW~~r~~~~~~~~~lp-------~---~f~er~--~~~g~i~ 337 (468)
T PLN02207 275 ASVVFLCFGSMGRLRGPLVKEIAHGLELCQ-----YRFLWSLRTEEVTNDDLLP-------E---GFLDRV--SGRGMIC 337 (468)
T ss_pred CcEEEEEeccCcCCCHHHHHHHHHHHHHCC-----CcEEEEEeCCCccccccCC-------H---HHHhhc--CCCeEEE
Confidence 345677778654 2334667777777662 245455553211 00111 1 111222 2455566
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc-----ceeeCCceEEeC--------
Q 001557 550 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD-----IHRVLDNGLLVD-------- 616 (1054)
Q Consensus 550 g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e-----iv~~~~~Gllv~-------- 616 (1054)
++.|+.+|-. ..+ .++||.= -|+ .+++||+.+|+|+|+-...+=.- ++...+.|+-+.
T Consensus 338 ~W~PQ~~IL~---H~~--vg~FvTH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~ 408 (468)
T PLN02207 338 GWSPQVEILA---HKA--VGGFVSH---CGW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSD 408 (468)
T ss_pred EeCCHHHHhc---ccc--cceeeec---Ccc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccC
Confidence 8888875443 331 1445521 233 46789999999999987644221 122234565331
Q ss_pred -CCCHHHHHHHHHHHHh
Q 001557 617 -PHDQQSIADALLKLVS 632 (1054)
Q Consensus 617 -p~d~~~la~aI~~ll~ 632 (1054)
.-+.++++++|++++.
T Consensus 409 ~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 409 EIVNANEIETAIRCVMN 425 (468)
T ss_pred CcccHHHHHHHHHHHHh
Confidence 2277899999999996
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=83.23 E-value=1.5 Score=46.15 Aligned_cols=50 Identities=8% Similarity=0.080 Sum_probs=38.1
Q ss_pred EecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcce-EEEecC
Q 001557 950 VIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKG 1002 (1054)
Q Consensus 950 V~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~-gVaMgN 1002 (1054)
+.|.-..|..=++++++++|+++++++. +||... . ++--+..|. ++...+
T Consensus 156 ~KPdp~iK~yHle~ll~~~gl~peE~LF-IDD~~~-N-VeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDFNVNPDEILF-IDDDMN-N-CKNALKEGYIALHVTG 206 (219)
T ss_pred cCCCccchHHHHHHHHHHcCCCHHHeEe-ecCCHH-H-HHHHHHCCCEEEEcCC
Confidence 3466778888899999999999999977 888766 5 777777774 444443
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=83.00 E-value=2.2 Score=45.51 Aligned_cols=40 Identities=13% Similarity=0.014 Sum_probs=29.9
Q ss_pred CCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEe
Q 001557 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 1000 (1054)
Q Consensus 954 ~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaM 1000 (1054)
|..|..+++.+. ...+++++ +||+.+ | +.|++.++..+|=
T Consensus 142 g~~K~~~l~~~~----~~~~~~i~-iGDg~~-D-~~~a~~Ad~~~ar 181 (214)
T TIGR03333 142 GCCKPSLIRKLS----EPNDYHIV-IGDSVT-D-VEAAKQSDLCFAR 181 (214)
T ss_pred CCCHHHHHHHHh----hcCCcEEE-EeCCHH-H-HHHHHhCCeeEeh
Confidence 346888887654 34566766 999999 9 9999999985553
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=82.76 E-value=2.3 Score=43.57 Aligned_cols=58 Identities=7% Similarity=-0.032 Sum_probs=44.7
Q ss_pred CCCEEEEEEecCCC----ChhhHHHHHHHHHHHhccCCCCce-EEEEEcCC-------CHHHHHHHHHhCCCC
Q 001557 767 RRKYVFVIAADCDT----TSDFLEIIKKVVEAAGKDNSAGFI-GFVLSTAL-------TILELHSLLVSGGLS 827 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL----~~~i~~~~~~al~~l~~~~~~~gi-~fvIaTGR-------~~~~i~~~l~~l~l~ 827 (1054)
...|.|+||.|.|| ..++++...+.++++++. .+. .++|.|=- ....+..+-+.+|++
T Consensus 39 ~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~---~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 39 KGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQ---FGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred cCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHH---CCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 34599999999999 477999999999999987 332 35555543 367788888888984
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=81.70 E-value=9.9 Score=45.78 Aligned_cols=177 Identities=12% Similarity=0.127 Sum_probs=118.9
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCC-CEEeCCC
Q 001557 473 PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG-QVAYPKH 551 (1054)
Q Consensus 473 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~-~V~~~g~ 551 (1054)
.+..++..+-.+ .|=-+..++.+..+.+ .-||-+|++=.-+..- .++++..+..+|+.+ +|.|..-
T Consensus 757 ~d~vvf~~FNqL--yKidP~~l~~W~~ILk--~VPnS~LwllrfPa~g---------e~rf~ty~~~~Gl~p~riifs~v 823 (966)
T KOG4626|consen 757 EDAVVFCNFNQL--YKIDPSTLQMWANILK--RVPNSVLWLLRFPAVG---------EQRFRTYAEQLGLEPDRIIFSPV 823 (966)
T ss_pred CCeEEEeechhh--hcCCHHHHHHHHHHHH--hCCcceeEEEeccccc---------hHHHHHHHHHhCCCccceeeccc
Confidence 333334444433 3433567777777653 3344333332211110 257888899999875 6888887
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc-------ccCcccceeeCCceEEeCCCCHHHHH
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-------NGGPVDIHRVLDNGLLVDPHDQQSIA 624 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~-------~Gg~~eiv~~~~~Gllv~p~d~~~la 624 (1054)
...+|=..-++.| ||++-+++.-|- .|-+|.+.+|+|+|+-. +++. ++...+.|-+| ..+.++..
T Consensus 824 a~k~eHvrr~~La----Dv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~S--ll~~~Gl~hli-ak~~eEY~ 895 (966)
T KOG4626|consen 824 AAKEEHVRRGQLA----DVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAAS--LLTALGLGHLI-AKNREEYV 895 (966)
T ss_pred cchHHHHHhhhhh----hhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHH--HHHHcccHHHH-hhhHHHHH
Confidence 7778888889999 999998876663 56678999999998744 2221 22222344455 24788888
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHH-h--cCCHHHHHHHHHHHHHHhhhc
Q 001557 625 DALLKLVSDKQLWERCRQNGLKNI-H--QFSWPEHCKSYLSRISSCKQR 670 (1054)
Q Consensus 625 ~aI~~ll~d~~~~~~~~~~~~~~v-~--~fsw~~~a~~yl~~l~~~~~~ 670 (1054)
+.-.++-+|.+..+.++...+... . .|+-..++..+.+.|.++=..
T Consensus 896 ~iaV~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~ 944 (966)
T KOG4626|consen 896 QIAVRLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKK 944 (966)
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHH
Confidence 887888889998888888887765 2 799999999999999876544
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.46 E-value=6.9 Score=48.82 Aligned_cols=53 Identities=8% Similarity=-0.057 Sum_probs=44.5
Q ss_pred CEEEEEEecCCCChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 769 KYVFVIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 769 kkLiv~DiDGTL~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
..|.|+-+=|=++ .+.++++++++.+++. ||.|...||-+...+..+.+++|+
T Consensus 571 ~~LtFvGlVGi~D-PPR~ev~~ai~~c~~a----GIrV~mITGD~~~TA~AI~r~iGi 623 (972)
T KOG0202|consen 571 SDLTFVGLVGILD-PPRPEVADAIELCRQA----GIRVIMITGDNKETAEAIAREIGI 623 (972)
T ss_pred cceEEEEEeeccC-CCchhHHHHHHHHHHc----CCEEEEEcCCCHHHHHHHHHHhCC
Confidence 3677766666553 4567889999999986 999999999999999999999997
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=80.21 E-value=2.4 Score=42.81 Aligned_cols=52 Identities=13% Similarity=0.063 Sum_probs=38.8
Q ss_pred EEEEEEecCCC----Chh------------------hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 770 YVFVIAADCDT----TSD------------------FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 770 kLiv~DiDGTL----~~~------------------i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
|++|+|+|||| ... .-|.+.+.|+.+.+ ...++|.|..+..-+..+++.+.-
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~-----~~ev~i~T~~~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK-----HYEVVIWTSASEEYAEPVLDALDP 74 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH-----HCEEEEE-SS-HHHHHHHHHHHTT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH-----hceEEEEEeehhhhhhHHHHhhhh
Confidence 68999999999 111 56788889998865 578889999999999999988763
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1054 | ||||
| 2r60_A | 499 | Structure Of Apo Sucrose Phosphate Synthase (Sps) O | 1e-45 | ||
| 3s28_A | 816 | The Crystal Structure Of Sucrose Synthase-1 In Comp | 5e-30 | ||
| 3s27_A | 816 | The Crystal Structure Of Sucrose Synthase-1 From Ar | 1e-28 | ||
| 3c4q_A | 426 | Structure Of The Retaining Glycosyltransferase Msha | 1e-10 | ||
| 3c48_A | 438 | Structure Of The Retaining Glycosyltransferase Msha | 2e-10 | ||
| 3fro_A | 439 | Crystal Structure Of Pyrococcus Abyssi Glycogen Syn | 1e-05 | ||
| 2bis_A | 440 | Structure Of Glycogen Synthase From Pyrococcus Abys | 1e-05 | ||
| 3l01_A | 428 | Crystal Structure Of Monomeric Glycogen Synthase Fr | 2e-05 | ||
| 3mbo_A | 414 | Crystal Structure Of The Glycosyltransferase Babsha | 6e-05 | ||
| 2jjm_A | 394 | Crystal Structure Of A Family Gt4 Glycosyltransfera | 7e-05 | ||
| 3oka_A | 381 | Crystal Structure Of Corynebacterium Glutamicum Pim | 2e-04 | ||
| 3okc_A | 394 | Crystal Structure Of Corynebacterium Glutamicum Pim | 2e-04 |
| >pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii Length = 499 | Back alignment and structure |
|
| >pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816 | Back alignment and structure |
|
| >pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. Length = 816 | Back alignment and structure |
|
| >pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426 | Back alignment and structure |
|
| >pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438 | Back alignment and structure |
|
| >pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439 | Back alignment and structure |
|
| >pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440 | Back alignment and structure |
|
| >pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428 | Back alignment and structure |
|
| >pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414 | Back alignment and structure |
|
| >pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394 | Back alignment and structure |
|
| >pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381 | Back alignment and structure |
|
| >pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1054 | |||
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 1e-171 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 1e-160 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 7e-94 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 2e-35 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 7e-34 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 4e-30 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 4e-29 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 4e-29 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 8e-27 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 1e-24 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 3e-20 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 1e-18 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-04 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 1e-08 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 2e-07 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 5e-07 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 1e-06 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 9e-05 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 3e-04 |
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 510 bits (1314), Expect = e-171
Identities = 149/541 (27%), Positives = 233/541 (43%), Gaps = 68/541 (12%)
Query: 164 KKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAP 223
+ ++ ++ G + D GGQ+ YV E++ AL M +VD++TR++
Sbjct: 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG--VQVDIITRRIKDE 63
Query: 224 DVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDA 283
+ E E++ I+RIPFG DK++ KE LWP++ E+V+
Sbjct: 64 NWPEFSGEIDYY-------------QETNKVRIVRIPFGG-DKFLPKEELWPYLHEYVNK 109
Query: 284 ALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDK 343
+ + + +P + HY D G A LL +P FTGHSLG K
Sbjct: 110 IINFYRE------------EGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQK 157
Query: 344 LEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR--LYDGFDP 401
+E+L + E++ +K RRI AE L++ ++ +I ST QE Q+ LY G
Sbjct: 158 MEKLNVNTS-NFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVN 216
Query: 402 VLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPP 461
V + + VIPPG+ GD
Sbjct: 217 VEDD-----------------DKFSVIPPGVNTRVFDGEYGD-------------KIKAK 246
Query: 462 IWSEIMHFFSNPR--KPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGN---- 515
I + + R P I+A +R D KKN LV+A+ + + L++ ANL L +
Sbjct: 247 ITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENP 306
Query: 516 RDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPA 575
+D +L I++LID D G+V+ + Q ++ Y A VF +
Sbjct: 307 FEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTS 366
Query: 576 FIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQ 635
F EPFGL +EA A GLP V T+NGGP +I G+LVDP D + IA LLK ++
Sbjct: 367 FYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEE 426
Query: 636 LWERCRQNGLKNIHQ-FSWPEHCKSYLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWR 694
W ++ G + + + ++W E + YL I R+ +PG S
Sbjct: 427 TWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDEEDEGGSLNIPDYFTNPGASND 486
Query: 695 D 695
+
Sbjct: 487 E 487
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 493 bits (1270), Expect = e-160
Identities = 140/628 (22%), Positives = 254/628 (40%), Gaps = 73/628 (11%)
Query: 86 ARKKKQIEGEEAQRKAKRRLERERGRKEASADMSEDLSEG----------DKGDVSGELS 135
+ K + E+ Q + + + + SE L E ++G G+ +
Sbjct: 189 HQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGW--GDNA 246
Query: 136 AH-GGSTRGRMPRISSVD--TMENWAIQYKEKKLYIVLISLHGLIRGENMELGRDSDTGG 192
R + + + D T+E + + +V++S HG +N+ LG DTGG
Sbjct: 247 ERVLDMIRLLLDLLEAPDPCTLETFLGR-VPMVFNVVILSPHGYFAQDNV-LGY-PDTGG 303
Query: 193 QVKYVVELARALGSMPG----------VYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTE 242
QV Y+++ RAL R+ +LTR + V T E E +
Sbjct: 304 QVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLL-PDAVGTTCGERLERV------ 356
Query: 243 NLMQGLGESSGAYIIRIPFGPK----DKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQ 298
+S I+R+PF + K++ + +WP++ + + A + +
Sbjct: 357 ------YDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKE------- 403
Query: 299 VGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEI 358
P I G+Y+D A+LL+ L V H+L + K + ++
Sbjct: 404 ----LNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKY----PDSDIYWKKL 455
Query: 359 NTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCH 418
+ Y + A+ +++ ++ +ITST QEI ++ + R V
Sbjct: 456 DDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFT-LPGLYRVVHGI 514
Query: 419 GRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEG-SPASPDPPIWSEIMHFFSNPRKPM 477
F P+ ++ PG + + + + E + + +KP+
Sbjct: 515 DVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPI 574
Query: 478 ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLI 537
+ +AR D KN++ LV+ +G+ LRELANL ++ G+R + A + + LI
Sbjct: 575 LFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRK-ESKDNEEKAEMKKMYDLI 633
Query: 538 DKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVA 596
++Y L GQ + + ++YR TKG F+ PA E FGLT++EA GLP A
Sbjct: 634 EEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA 693
Query: 597 TKNGGPVDIHRVLDNGLLVDPHD----QQSIADALLKLVSDKQLWERCRQNGLKNIHQ-F 651
T GGP +I +G +DP+ ++AD K D W+ + GL+ I + +
Sbjct: 694 TCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKY 753
Query: 652 SWPEHCKSYLSRISSCKQRQPRWQRSDD 679
+W + + L + W+ +
Sbjct: 754 TWQIYSQRLL----TLTGVYGFWKHVSN 777
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 304 bits (782), Expect = 7e-94
Identities = 94/522 (18%), Positives = 170/522 (32%), Gaps = 103/522 (19%)
Query: 162 KEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS 221
+ + + +IS+H ++ D+GG Y++ A L VD+ TR
Sbjct: 17 RGSHMRVAMISMHT----SPLQQPGTGDSGGMNVYILSTATELAKQG--IEVDIYTRATR 70
Query: 222 APDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFV 281
+ +I I GP + + KE L + F
Sbjct: 71 PSQGEIVRVAE--------------------NLRVINIAAGPYE-GLSKEELPTQLAAFT 109
Query: 282 DAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGR 341
L+ + + + IH HY +G LL +P++ T H+L
Sbjct: 110 GGMLSFTRR------------EKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAA 157
Query: 342 DKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401
K T + R E+ +D ++++ +T++E+++ Y DP
Sbjct: 158 VKNSYRDDSD---------TPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHY-DADP 207
Query: 402 VLERKLRARIKRGVSCHGRFMPRMVVIPPGI---EFHHIVRHNGDVDGEVERDEGSPASP 458
R+ V+ PG +
Sbjct: 208 ---------------------DRISVVSPGADVELYSP--------------------GN 226
Query: 459 DPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDD 518
D ++ + R P K L+KA NL +I+
Sbjct: 227 DRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPS 286
Query: 519 IDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIE 578
A + + ++ + ++ + S++ +YR A + P+F E
Sbjct: 287 GPN------ATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAA----DIVAVPSFNE 336
Query: 579 PFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWE 638
FGL +EA A G P++A + GG + GLLVD H + ADAL L+ D +
Sbjct: 337 SFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRI 396
Query: 639 RCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQPRWQRSDDG 680
R ++ +++ FSW S + + + G
Sbjct: 397 RMGEDAVEHARTFSWAATAAQLSSLYNDAIANENVDGETHHG 438
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 2e-35
Identities = 61/466 (13%), Positives = 127/466 (27%), Gaps = 125/466 (26%)
Query: 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGE 250
GG + + +A + + G V + T+
Sbjct: 14 GGLQRDFMRIASTVAAR-GH-HVRVYTQSWEGDCPK------------------------ 47
Query: 251 SSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAI 310
+I++P + E+ H+ + +
Sbjct: 48 --AFELIQVPVKSHTNH-------GRNAEYYAWVQNHLKEHP--------------ADRV 84
Query: 311 HGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEA 370
G G + V G L R + + Y+ E
Sbjct: 85 VGFNKMPGLDVYFAADVCYAEKVAQEK-------------GFLYR--LTSRYRHYAAFER 129
Query: 371 EELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPP 430
S ++ T ++I + + Y +P R ++PP
Sbjct: 130 ATFEQGKSTKLMMLTDKQIADFQKHY-QTEP---------------------ERFQILPP 167
Query: 431 GIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNI 490
GI E+ R + ++ ++L + +K +
Sbjct: 168 GIYPDRKYSEQIPNSREIYRQK----------------NGIKEQQNLLLQVGSDFGRKGV 211
Query: 491 TTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPK 550
++A L ++G L +K + V +
Sbjct: 212 DRSIEALASLPESLRHNTLLFVVG---------QDKPRKFE---ALAEKLGVRSNVHFFS 259
Query: 551 HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLD 610
++DV ++ A + ++PA+ E G+ L+EA GLP++ T G + D
Sbjct: 260 G--RNDVSELMAAAD----LLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHY--IAD 311
Query: 611 --NGLLV-DPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSW 653
G ++ +P Q+ + + L K ++ L +N
Sbjct: 312 ANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDL 357
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 7e-34
Identities = 63/478 (13%), Positives = 148/478 (30%), Gaps = 132/478 (27%)
Query: 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGE 250
GG EL + L G + + +T +
Sbjct: 27 GGSGVVGTELGKQLAER-G-HEIHFITSGLPFRLNK-----------------------V 61
Query: 251 SSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAI 310
Y + P + A + + ++++ + +
Sbjct: 62 YPNIYFHEVTVNQYSV--------FQYPPYDLALASKMAEVAQRENLDI----------L 103
Query: 311 HGHYADAGDAAALLSGAL---NVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRR 367
H HYA A L+ + + +V T H +I
Sbjct: 104 HVHYAIPHAICAYLAKQMIGERIKIVTTLHGT-----------------DITVLGSDPSL 146
Query: 368 IEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVV 427
++ S++V + I E L +
Sbjct: 147 NNLIRFGIEQSDVVTAVSHSLINETHELVKPNK-----------------------DIQT 183
Query: 428 IPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPK 487
+ I+ + + +++++ G + +++ ++
Sbjct: 184 VYNFIDERVYFKRDMT---QLKKEYGIS-----------------ESEKILIHISNFRKV 223
Query: 488 KNITTLVKAFGECRPLRELANLTLIM-GNRDDIDEMSGTNAALLLSILKLIDKYDLYGQV 546
K + +V+AF + + + L++ G+ + IL+L+ + +V
Sbjct: 224 KRVQDVVQAFAK---IVTEVDAKLLLVGDGPEFCT-----------ILQLVKNLHIEDRV 269
Query: 547 AYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIH 606
+ KQ +V ++ ++ + + + E FGL L+EA A G+P + T+ GG ++
Sbjct: 270 LF--LGKQDNVAELLAMSD----LMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEV- 322
Query: 607 RVLD--NGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQ-FSWPEHCKSYL 661
+ G L + D +AD ++L+ D++L + +++++ F + Y
Sbjct: 323 -IQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYE 379
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 4e-30
Identities = 83/468 (17%), Positives = 126/468 (26%), Gaps = 136/468 (29%)
Query: 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGE 250
GG +V++LA L G V +L + + +
Sbjct: 35 GGVQSHVLQLAEVLRDA-GH-EVSVLAP-------ASPHVKLPD--------------YV 71
Query: 251 SSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAI 310
SG + IP+ + P I +
Sbjct: 72 VSGGKAVPIPYNGSVARL------RFGPATHRKVKKWI--------------AEGDFDVL 111
Query: 311 HGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEA 370
H H +A + L A P+V T H+ L + QG L +I
Sbjct: 112 HIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSLTLSVFQGILRP--------YHEKI-- 161
Query: 371 EELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPP 430
V R+ E V IP
Sbjct: 162 -----IGRIAVSDLARRWQME----------------------------ALGSDAVEIPN 188
Query: 431 GIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD-PKKN 489
G+ DV + A +L L R D P+K
Sbjct: 189 GV----------DVA------SFADAPLLDGY---------PREGRTVLFLGRYDEPRKG 223
Query: 490 ITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYP 549
+ L+ A + + LI+G G L L GQV
Sbjct: 224 MAVLLAALPKLVARFPDVEI-LIVG--------RGDEDELREQAGDLAGHLRFLGQVD-- 272
Query: 550 KHHKQSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV 608
+ R A V+ P E FG+ L+EA A G +VA+ + +
Sbjct: 273 ----DATKASAMRSAD----VYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRV--L 322
Query: 609 LD--NGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWP 654
D G LV D +A AL+ ++ D QL + +H++ W
Sbjct: 323 ADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWS 370
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 4e-29
Identities = 57/356 (16%), Positives = 109/356 (30%), Gaps = 79/356 (22%)
Query: 310 IHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIE 369
+ H P ++ H I+ + E
Sbjct: 130 VLVHDPQPAALIEFY--EKKSPWLWRCH--------------------IDLSSPNREFWE 167
Query: 370 AEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 429
++ + I + ++ D + V++P
Sbjct: 168 FLRRFVEKYDRYIFHLPEYVQ------PELDR---------------------NKAVIMP 200
Query: 430 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKN 489
P I D E + I + F +P KP+I ++R DP K
Sbjct: 201 PSI----------DPLSEKNVEL-----KQTEILRILERFDVDPEKPIITQVSRFDPWKG 245
Query: 490 ITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYP 549
I +++ + + + L L+ D E L K+ + YD+
Sbjct: 246 IFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLR---KIGEDYDVKVLTNLI 302
Query: 550 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVL 609
H + +V R + V + + E FGLT+ EA G P++ GG ++
Sbjct: 303 GVHAR-EVNAFQRASD----VILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQ--IV 355
Query: 610 D--NGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQ-FSWPEHCKSYLS 662
D G LV + + +L L+ ++ + + + + F +H + YL
Sbjct: 356 DGETGFLVRDAN--EAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLD 409
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 4e-29
Identities = 68/481 (14%), Positives = 133/481 (27%), Gaps = 136/481 (28%)
Query: 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGE 250
GG Y+ + + + +A +
Sbjct: 19 GGIQSYLRDFIATQDPE----SIVVFASTQNAEEAHAYDKTL------------------ 56
Query: 251 SSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAI 310
+IR P +L A+ II+ + +
Sbjct: 57 --DYEVIRWPRSV--------MLPTP---TTAHAMAEIIRERE-------------IDNV 90
Query: 311 HGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIE 369
A A A ++ + H E SR + +R+I
Sbjct: 91 WFGAAAPLALMAGTAKQAGASKVIASTHGH-----EVGWSMLPGSR-------QSLRKI- 137
Query: 370 AEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 429
+++ ++ R K P +P
Sbjct: 138 -----GTEVDVLTYISQYT-------------------LRRFKS----AFGSHPTFEHLP 169
Query: 430 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKN 489
G++ + + G P+I +R P+K
Sbjct: 170 SGVDVKRFTPATPEDKSATRKKLGFT-----------------DTTPVIACNSRLVPRKG 212
Query: 490 ITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYP 549
+L+KA + R A L LI+G+ + + ++ G++ Y
Sbjct: 213 QDSLIKAMPQVIAARPDAQL-LIVGSGRYESTLRRLATDVSQNVK-------FLGRLEYQ 264
Query: 550 KHHKQSDVPDIYRLAAKTKGVFINPAFI-------EPFGLTLIEAAAYGLPIVATKNGGP 602
D+ + A +F PA E G+ +EA A G+P++A +GG
Sbjct: 265 ------DMINTLAAAD----IFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGA 314
Query: 603 VDIHRVLD-NGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIH-QFSWPEHCKSY 660
+ V GL+V+ D +++ L++L+ D G ++ ++SW +
Sbjct: 315 PET--VTPATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERL 372
Query: 661 L 661
Sbjct: 373 T 373
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 8e-27
Identities = 28/180 (15%), Positives = 70/180 (38%), Gaps = 24/180 (13%)
Query: 476 PMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSIL 534
I + R +KN + L+KA + ++ L + G G + +
Sbjct: 3 FKIAMVGRYSNEKNQSVLIKAVAL---SKYKQDIVLLLKG--------KGPDEKKIK--- 48
Query: 535 KLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGL-P 593
L K + + + +++ +I + ++++ A +E + +EA + G+ P
Sbjct: 49 LLAQKLGVKAEFGFVNS---NELLEILKTCT----LYVHAANVESEAIACLEAISVGIVP 101
Query: 594 IVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSW 653
++A LD L +P++ + ++ + + +K ER + K+ ++
Sbjct: 102 VIANSPLSATRQF-ALDERSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTL 160
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 1e-24
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 30/195 (15%)
Query: 460 PPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIM-GNRDD 518
P+ E F L++ R P+K I ++ F ++L + L + G
Sbjct: 10 HPV--ETSKFKFKCYGDFWLSVNRIYPEKRIELQLEVF------KKLQDEKLYIVGWFSK 61
Query: 519 IDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIE 578
D A ++ I D G V + ++ D+Y K + A E
Sbjct: 62 GDHAE-RYARKIMKIAP--DNVKFLGSV------SEEELIDLYS-RCK---GLLCTAKDE 108
Query: 579 PFGLTLIEAAAYGLPIVATKNGGPVDIHRVLD--NGLLVDPHDQQSIADALLKLVSDKQL 636
FGLT IEA A G P++A GG + V++ G LV+ D I DA+ K+ +
Sbjct: 109 DFGLTPIEAMASGKPVIAVNEGGFKET--VINEKTGYLVNA-DVNEIIDAMKKVSKNP-- 163
Query: 637 WERCRQNGLKNIHQF 651
++ +++ + +F
Sbjct: 164 -DKFKKDCFRRAKEF 177
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 93.7 bits (232), Expect = 3e-20
Identities = 29/230 (12%), Positives = 75/230 (32%), Gaps = 30/230 (13%)
Query: 434 FHHIVRHNGDVDGEVERDEGSPASP----DPPIWSEIMHF--FSNPRKPMILALARPD-P 486
I N ++ + ++G + P I + + ++ ++ +IL RP
Sbjct: 194 GPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYINDKRQKEKIILVYGRPSVK 253
Query: 487 KKNITTLVKAFGE-CRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQ 545
+ T +V+A + +I D L + G+
Sbjct: 254 RNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDIA-----------LGKGIHLNSLGK 302
Query: 546 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDI 605
+ D D+ + ++ + I+ +E A +GL ++ D+
Sbjct: 303 LT------LEDYADLLKRSS----IGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDL 351
Query: 606 HRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPE 655
N + ++ + ++IA+ L++L + ++ + +
Sbjct: 352 SNWHSNIVSLEQLNPENIAETLVELCMSFNNRDVDKKESSNMMFYINEFN 401
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 88.3 bits (218), Expect = 1e-18
Identities = 33/249 (13%), Positives = 67/249 (26%), Gaps = 27/249 (10%)
Query: 455 PASPDPPIWSEIMHFFSNP---RKPMILALARPDPKKNITTLVKAFGECRPLRELANLT- 510
D + + L + R +K + V A A +
Sbjct: 161 SHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRF 220
Query: 511 LIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGV 570
L + + ++ L++ L + V +Y V
Sbjct: 221 LCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACD----V 276
Query: 571 FINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIAD----- 625
+N + E FGL E A G P++ + GG D D + P S+ D
Sbjct: 277 IVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFS-GDCVYKIKPSAWISVDDRDGIG 335
Query: 626 ------------ALLKLVSDKQLWERCRQNGLKNIHQ-FSWPEHCKSYLSRISSCKQRQP 672
D++ + + + +W + + +S + +
Sbjct: 336 GIEGIIDVDDLVEAFTFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVES 395
Query: 673 RWQRSDDGL 681
R ++
Sbjct: 396 RETPGNEEH 404
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.8 bits (149), Expect = 1e-09
Identities = 91/651 (13%), Positives = 176/651 (27%), Gaps = 213/651 (32%)
Query: 341 RDKLEQLLKQGRLSRD-EINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGF 399
+D L + + + + I ++E + I+++ + RL+
Sbjct: 19 KDILSVFEDA--FVDNFDCKDVQDMPKSILSKE---EIDHIIMSKDA--VSGTLRLFW-- 69
Query: 400 DPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEF--HHIVRHNGDVDGEVER--DEGSP 455
L ++ + V +F+ V+ +F I ++
Sbjct: 70 ------TLLSKQEEMVQ---KFVEE--VLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118
Query: 456 ASPDPPIWSEIMHFFSNPRKPMIL----ALARPDPKKNI----------TTLVKAFGECR 501
D ++++ ++ R L AL P KN+ T + C
Sbjct: 119 LYNDNQVFAK----YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV--CL 172
Query: 502 PLRELANLT-----LIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSD 556
+ + L + N + + +L +L+ L Q+ P +SD
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPET--------VLEMLQ-----KLLYQID-PNWTSRSD 218
Query: 557 VPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVD 616
+L I+ L++ + +N LLV
Sbjct: 219 HSSNIKL---------RIHSIQAELRRLLK-------------------SKPYENCLLV- 249
Query: 617 PHDQQSIADALLKLVSDKQLWE----RCR-----QNGLKNIHQFSWPEHCKSYLSRISSC 667
L V + + W C+ + K +S+
Sbjct: 250 -----------LLNVQNAKAWNAFNLSCKILLTTRF--------------KQVTDFLSAA 284
Query: 668 KQRQPRWQRSDDGLDNSESDS---------PGDSWRDIHDLSLNLKLSLEGDK-NEGGST 717
L E S P D R++ + +LS+ + +G +T
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP-RRLSIIAESIRDGLAT 343
Query: 718 LDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYV--FVIA 775
DN + +T +E+++ L PA R+ + V
Sbjct: 344 WDNWKHVNCDKLT--TIIESSLNVLE-------------------PAEYRKMFDRLSVFP 382
Query: 776 ADCDTTSDFLEII------------------KKVVEAAGKDNSAGFIGFVLSTALTILE- 816
+ L +I +VE K+++ L + +
Sbjct: 383 PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENE 442
Query: 817 --LHSLLV----------SGGLSPLAFDAFICNSGSELYY---PSSSTEDNHGLPFLVDL 861
LH +V S L P D + S + + E + L
Sbjct: 443 YALHRSIVDHYNIPKTFDSDDLIPPYLDQYFY---SHIGHHLKNIEHPERMTLFRMVF-L 498
Query: 862 DYRF------HTEYRWGGEG-LRKTLVRWAASVNDKKGEEGKIVEEDESRS 905
D+RF H W G + TL K + I + D
Sbjct: 499 DFRFLEQKIRHDSTAWNASGSILNTL-------QQLKFYKPYICDNDPKYE 542
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 9e-08
Identities = 75/568 (13%), Positives = 150/568 (26%), Gaps = 210/568 (36%)
Query: 151 VDTMENWAIQYKEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGV 210
+D E QY+ K I+ + + + D K V ++ +++
Sbjct: 7 MDF-ETGEHQYQYKD--ILSVFEDAFVD--------NFD----CKDVQDMPKSI------ 45
Query: 211 YRVDLLTRQVSAPDVDWTYAEPSE---------MLNRKNTENLMQGLGE----------S 251
+S ++D L K E + + + E S
Sbjct: 46 ---------LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMS 96
Query: 252 SGAYIIRIPFGPKDKYV-QKELLWPHIPEFVDAALT---HIIQISKVLGEQVGSGQPIWP 307
R P Y+ Q++ L+ F ++ +++ + L E +P
Sbjct: 97 PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL----RPAKN 152
Query: 308 VAIHGHYADAGD------AAALLSGALNVPMVFTGH--SLGR-DKLEQLLKQGRLSRDEI 358
V I G G LS + M F +L + E +L+ L
Sbjct: 153 VLIDG---VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM--LQ---- 203
Query: 359 NTTYKIMRRIEAEELSLDASEIVITSTRQEIEE--QWRLY----------------DGFD 400
Y+I + ++ I S + E+ + + Y + F+
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN 263
Query: 401 PVLERKLRARIKRGVSCHGRFMPRMVV----------IPPGIEFHHIVRHNGDVDGEVER 450
+SC ++++ + H + H+ E
Sbjct: 264 --------------LSC------KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303
Query: 451 DE------GSPASPDPPIWSEIMHFFSNPRK-PMILALARPDP----------KKNITTL 493
P NPR+ +I R +TT+
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTT-----NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358
Query: 494 VKAF------GECRPL-RELA-----------NLTLIMGNRDDIDEMSGTNA-------- 527
+++ E R + L+ L+LI + D M N
Sbjct: 359 IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE 418
Query: 528 -----------ALLLSIL-----------KLIDKYDLYGQVAYPKHHKQSDVPDIY---- 561
++ L + ++D Y++ + D Y
Sbjct: 419 KQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNI--PKTFDSDDLIPPYLDQYFYSH 476
Query: 562 --------RLAAKT---KGVFINPAFIE 578
+ + VF++ F+E
Sbjct: 477 IGHHLKNIEHPERMTLFRMVFLDFRFLE 504
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 4e-07
Identities = 65/508 (12%), Positives = 143/508 (28%), Gaps = 161/508 (31%)
Query: 42 FVEQVITGFDE---TDLHRSWIRAA------ATRSPQERNTRLENMCWRIWNLARKKKQI 92
F + + FD D+ +S + ++ RL W L K++++
Sbjct: 25 FEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL------FWTLLSKQEEM 78
Query: 93 EGEEAQRKAKRRLER------ERGRKEA---SADMSEDLSEGDKGDVSGELSAHGGSTRG 143
Q+ + L + E S + + D+ ++ +
Sbjct: 79 ----VQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF-----AKY 129
Query: 144 RMPRISSVDTMENWAIQYKEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARA 203
+ R+ + ++ + K +++ G + LG +G +++ +
Sbjct: 130 NVSRLQPYLKLRQALLELRPAK-NVLI---DG------V-LG----SGKTW-VALDVCLS 173
Query: 204 LG---SMP-GVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRI 259
M ++ ++L + ++P+ E + L + N + S +RI
Sbjct: 174 YKVQCKMDFKIFWLNL--KNCNSPETV---LEMLQKLLYQIDPNWTS-RSDHSSNIKLRI 227
Query: 260 PFGP-------KDKYVQKELL-----WPHIPEFVDA--------ALTHIIQISKVLGEQV 299
K K + LL + +A T Q++ L
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQ--NAKAWNAFNLSCKILLTTRFKQVTDFLSAAT 285
Query: 300 GSGQPIWPVAIHGHYADA---GDAAALLSGALNVPM------VFTGHSL----------- 339
+ + H++ + +LL L+ V T +
Sbjct: 286 TTHISL------DHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRD 339
Query: 340 -----------GRDKLEQLLKQG--RLSRDEINTTYK---IMR---RIEAEELSL----- 375
DKL +++ L E + + I LSL
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDV 399
Query: 376 ---DASEIVITSTRQEIEEQW------RLYDGF---------DPVLERKLRAR--IKRGV 415
D +V + + E+ + + + L R + I +
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF 459
Query: 416 SCHGRFMPRMVVIPPGIE---FHHIVRH 440
+IPP ++ + HI H
Sbjct: 460 DSDD-------LIPPYLDQYFYSHIGHH 480
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 5e-06
Identities = 70/610 (11%), Positives = 165/610 (27%), Gaps = 172/610 (28%)
Query: 551 HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLD 610
HH + + VF AF++ F ++ + +K +D
Sbjct: 5 HHMDFETGEHQYQYKDILSVFE-DAFVDNFDCKDVQDM---PKSILSK--------EEID 52
Query: 611 NGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQ--FSWPEHCKSYLSRISS-C 667
+ +++ L + KQ E Q ++ + + + + +S I +
Sbjct: 53 H-IIMSKDAVSGT-LRLFWTLLSKQ--EEMVQKFVEEVLRINYKF------LMSPIKTEQ 102
Query: 668 KQRQPRWQRSDDGLDNSESD----SPGDSWR-----DIHDLSLNLK----LSLEGDKNEG 714
+Q + + D +D + + R + L L+ + ++G G
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG 162
Query: 715 GSTL------DNSLDTE-ENAV----TGKNKLENAVLALSNR-----TIGGTQKADH--- 755
+ + + + + + VL + + T ++DH
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222
Query: 756 ---NVASGKFPALRR----RKY---------VF---VIAA---DCDT--TSDFLEIIKKV 791
+ S + LRR + Y V A C T+ F ++ +
Sbjct: 223 IKLRIHSIQ-AELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFL 281
Query: 792 VEAAGKDNSAGFI--GFVLSTALTIL---------ELHSLLVSGGLSPLAFDAFICNSGS 840
A S ++L +L +++ +P
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT--NPRRLSII----AE 335
Query: 841 EL--------YYPSSSTEDNH-----GLPFLVDLDYRFHTEYRWGGEGL----------R 877
+ + + + L L +YR + + L
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKM--F----DRLSVFPPSAHIPT 389
Query: 878 KTLVR-WAASVNDKKGEEGKIVEEDESRS-----------TIHCYAFEVTNPQMIPPVKE 925
L W + K + +V + S +I E+ +
Sbjct: 390 ILLSLIWF---DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK--LENEYA 444
Query: 926 LRKLMRIQALRCHVIYCQNGTKL-------------HVIPV-LASRSQALR--YLHVRWG 969
L + + + + + H+ + R R +L R+
Sbjct: 445 LHRSI-VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF- 502
Query: 970 IDLSNVVVIAG--ECGDTDYEGLLGGV--HKTVILKGVGESARKLHANRNYSL---EDVI 1022
L + L + +K I + R ++A ++ E++I
Sbjct: 503 --LEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLI 560
Query: 1023 SFDSHNVIQV 1032
+++++
Sbjct: 561 CSKYTDLLRI 570
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 3e-04
Identities = 91/614 (14%), Positives = 176/614 (28%), Gaps = 188/614 (30%)
Query: 204 LGSMPGVYRVDLLT--RQVSAPDVDWTYAE--PSEMLNRKNTENLMQGLGESSGAYIIRI 259
G Y+ D+L+ + D + P +L+++ ++++ SG +
Sbjct: 11 TGEHQYQYK-DILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69
Query: 260 PFGPKDKYVQKELLWPHIPEFVDAALTHIIQIS-KVLGEQVGSGQPIWPVAIHGHYADAG 318
K Q+E+ + +FV+ L +I+ K L + + P + Y +
Sbjct: 70 TL--LSK--QEEM----VQKFVEEVL----RINYKFLMSPI-KTEQRQPSMMTRMYIEQR 116
Query: 319 DAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLS-RDEINTT---------------- 361
D N VF +++ R + L+Q L R N
Sbjct: 117 DRL------YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170
Query: 362 ---YKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK------------ 406
YK+ +++ + L+ S +E +L DP +
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKN--CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 407 -LRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS- 464
++A ++R + + +++ + + + +
Sbjct: 229 SIQAELRRLLK--SKPYENCLLV---------------LL-----N----------VQNA 256
Query: 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-----------IM 513
+ + F+ K IL R K +T + A + ++TL +
Sbjct: 257 KAWNAFNLSCK--ILLTTR---FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL 311
Query: 514 GNR-DDI-DEMSGTNAALLLSIL-----KLIDKYDLYGQVAYPKHHKQSDV------PDI 560
R D+ E+ TN LSI+ + +D + V K + P
Sbjct: 312 DCRPQDLPREVLTTN-PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE 370
Query: 561 YRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIH---RVLDNGLL--- 614
YR VF P H +L L+
Sbjct: 371 YRKMFDRLSVF------------------------------PPSAHIPTILL--SLIWFD 398
Query: 615 VDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIH--QFSWPEHCKSYLS---RISSCKQ 669
V D + + L K L E+ + +I ++ + I
Sbjct: 399 VIKSDVMVVVNKLHK----YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYN 454
Query: 670 RQPRWQRSD------DG---------LDNSESDSPGDSWRDIH-DLS-LNLKLSLEG-DK 711
+ D D L N E +R + D L K+ +
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW 514
Query: 712 NEGGSTLDNSLDTE 725
N GS L+ +
Sbjct: 515 NASGSILNTLQQLK 528
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 1e-08
Identities = 25/197 (12%), Positives = 54/197 (27%), Gaps = 33/197 (16%)
Query: 473 PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIM-GNRDDIDEMSGTNAALLL 531
++ +L + R P K L++ G + +
Sbjct: 160 AKEDFLLFMGRVSPHKGALEAAAFA-------HACGRRLVLAGPAWEPEYFDEITRRYG- 211
Query: 532 SILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA------KTKGVFINPAFIEPFGLTLI 585
+ G+V D+ A + + EP +
Sbjct: 212 ------STVEPIGEVG------GERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVS 259
Query: 586 EAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGL 645
EAA G P+V T NG + ++ + V + D + ++ + R+
Sbjct: 260 EAAVSGTPVVGTGNGCLAE---IVPSVGEVVGYGTDFAPDEARRTLAGLPASDEVRR--- 313
Query: 646 KNIHQFSWPEHCKSYLS 662
+ + + Y+
Sbjct: 314 AAVRLWGHVTIAERYVE 330
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 2e-07
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 578 EPFGLTLIEAAAYG-LPIV-ATKNGGPVDIHRVLD-NGLLVDPHDQQSIADALLKLVS-D 633
EPFGL +EA G +PI A GG DI + + G+LV D +A+A+LK +
Sbjct: 126 EPFGLVALEAMCLGAIPIASAV--GGLRDI--ITNETGILVKAGDPGELANAILKALELS 181
Query: 634 KQLWERCRQNGLKNIHQFSW 653
+ + R+N K S+
Sbjct: 182 RSDLSKFRENCKK--RAMSF 199
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 5e-07
Identities = 63/478 (13%), Positives = 139/478 (29%), Gaps = 92/478 (19%)
Query: 275 PHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALL-SGALNVPMV 333
P + A+ ++ LGE + H H AG A L ++V +
Sbjct: 151 PENDFETNDAILLGYTVAWFLGEVAHLDSQ-HAIVAHFHEWLAGVALPLCRKRRIDVVTI 209
Query: 334 FTGHS--LGRDKLEQLLKQGRLSRDEINTT-----YKIMRRIEAEELSLDASEIVIT--- 383
FT H+ LGR + ++ + I R E + ++++ T
Sbjct: 210 FTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHSADVFTTVSQ 269
Query: 384 STRQEIEEQWR------LYDGFDPV----------LERKLRARIKRGVSCH--------- 418
T E E + L +G + + L + +I V H
Sbjct: 270 ITAFEAEHLLKRKPDGILPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDL 329
Query: 419 ---------GRFMPRM----VVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSE 465
GR+ + + I ++ ++ +G V + + +
Sbjct: 330 DNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEAL 389
Query: 466 IMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGT 525
+ + + K+ ++ +L ++ + D +
Sbjct: 390 KGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRI 449
Query: 526 NAALLLS------------------ILKLIDKYDLYGQVA-------YPKHHKQSD--VP 558
A IL I + L+ + +P+ ++ +
Sbjct: 450 LALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILG 509
Query: 559 DIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG-------PVDIHRVLDN 611
Y + + + P++ EP+G T E G+P + T G ++ ++ D
Sbjct: 510 LDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDY 569
Query: 612 GLLVDPHDQQS-------IADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYL 661
G+ + ++ + D + + V ++ R W Y+
Sbjct: 570 GIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYV 627
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* Length = 244 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 1e-06
Identities = 36/205 (17%), Positives = 69/205 (33%), Gaps = 46/205 (22%)
Query: 804 IGFVLST------ALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSSTEDNHGLPF 857
+T A + + L+ D ++ GSE+Y+P
Sbjct: 35 FYLAYATGRSYHSARELQKQVGLM--------EPDYWLTAVGSEIYHPEG---------- 76
Query: 858 LVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNP 917
+D + + W + L+ E K E Y + P
Sbjct: 77 -LDQHWADYLSEHWQRDILQAIA---------DGFEALKPQSPLEQNPWKISYHLD---P 123
Query: 918 QMIPPV-KELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVV 976
Q P V +L ++++ + VI+ + ++P +++ A +YL ++ S +
Sbjct: 124 QACPTVIDQLTEMLKETGIPVQVIFSSGKD-VDLLPQRSNKGNATQYLQQHLAMEPSQTL 182
Query: 977 VIAGECGDT--DYEGLLGGVHKTVI 999
V CGD+ D L + VI
Sbjct: 183 V----CGDSGNDIG-LFETSARGVI 202
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 9e-05
Identities = 20/216 (9%), Positives = 63/216 (29%), Gaps = 42/216 (19%)
Query: 785 LEIIKKVVEAAGKDNSAGFIGFVLST------ALTILELHSLLVSGGLSPLAFDAFICNS 838
+ ++ +E KD + T L + +
Sbjct: 46 IYELEDYLEQKSKDGE---LIIGWVTGSSIESILDKMGRGKFRYFP-------HFIASDL 95
Query: 839 GSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIV 898
G+E+ Y S + ++ F ++ + + +++ +
Sbjct: 96 GTEITYFSEHNFGQQDNKWNSRINEGFS----------KEKVEKLVKQLHENHNIL--LN 143
Query: 899 EEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRI---QALRCHVIYCQNGTK-------L 948
+ + + + + F I K L + +I + ++ C +
Sbjct: 144 PQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDV 203
Query: 949 HVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGD 984
IP+ +++ + ++ ++ ++ + GD
Sbjct: 204 DFIPIGTGKNEIVTFMLEKYNLNTERAIA----FGD 235
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 3e-04
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
Query: 578 EPFGLTLIEAAAYG-LPIV-ATKNGGPVDIHRVLD-NGLLVDPHDQQSIADAL---LKLV 631
EPFGL +EA G +PI A GG DI + + G+LV D +A+A+ L+L
Sbjct: 341 EPFGLVALEAMCLGAIPIASAV--GGLRDI--ITNETGILVKAGDPGELANAILKALELS 396
Query: 632 SDKQLWERCRQNGLKNIHQFSWPEHCKSYL 661
R FSW + + Y+
Sbjct: 397 RSDLSKFRENCKK--RAMSFSWEKSAERYV 424
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1054 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 6e-24 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 3e-23 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 6e-19 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 3e-09 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 5e-06 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 104 bits (259), Expect = 6e-24
Identities = 59/376 (15%), Positives = 109/376 (28%), Gaps = 56/376 (14%)
Query: 307 PVAIHGHYADAGDAAALL--SGALNVPMVFTGHS------LGRDKLEQLLKQGRLSRDEI 358
P +H H A + + +P + T H+ G + +L E
Sbjct: 131 PDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEG 190
Query: 359 NTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCH 418
Y + ++ + A V S +EI L F LE + +R
Sbjct: 191 IEYYNDVSFLKGGLQTATALSTVSPSYAEEI-----LTAEFGMGLEGVIGSRAHV----- 240
Query: 419 GRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMI 478
+ I GI+ + + + P+
Sbjct: 241 ------LHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLF 294
Query: 479 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 538
++R +K I + +A E L ++ ++ L
Sbjct: 295 CVISRLTWQKGIDLMAEAVDEIV--SLGGRLVVLGAGDVALEGA------------LLAA 340
Query: 539 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 598
+G+V + + + I P+ EP GLT + A YG V +
Sbjct: 341 ASRHHGRVGVAIGYNEPLSHLMQAGCD----AIIIPSRFEPCGLTQLYALRYGCIPVVAR 396
Query: 599 NGGPVDI---------HRVLDNGLLVDPHDQQSIADAL---LKLVSDKQLWERCRQNGLK 646
GG D G+ P + A+ ++ D +LW + ++ G+K
Sbjct: 397 TGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK 456
Query: 647 NIHQFSWPEHCKSYLS 662
SW + Y +
Sbjct: 457 --SDVSWEKSAGLYAA 470
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 101 bits (252), Expect = 3e-23
Identities = 86/474 (18%), Positives = 157/474 (33%), Gaps = 66/474 (13%)
Query: 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLG 249
GG + + ++ AL S+ G + V + T + E ++ +
Sbjct: 15 VGGLAEALTAISEALASL-G-HEVLVFTPSHGRFQGE----EIGKIRVFGEEVQVKVSYE 68
Query: 250 ESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVA 309
E I RI G D +++ P + A+T +L + + + P
Sbjct: 69 ERGNLRIYRIGGGLLDS---EDVYGPGWDGLIRKAVTFGRASVLLLNDLLR--EEPLPDV 123
Query: 310 IHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIE 369
+H H A AL+ +P VFT H L + KL + + I+
Sbjct: 124 VHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKL-----PAFYFHEAGLSELAPYPDID 178
Query: 370 AEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 429
E ++IV T +R + ++W + F+ ++ +
Sbjct: 179 PEHTGGYIADIVTTVSRGYLIDEWGFFRNFEG----------------------KITYVF 216
Query: 430 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKN 489
GI+ S D S + F + + +K
Sbjct: 217 NGIDCSFWNESY------------LTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKG 264
Query: 490 ITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYP 549
+ L+KA +E + I+ + D + + +G V
Sbjct: 265 VDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEG-----------WARSLEEKHGNVKVI 313
Query: 550 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVL 609
+ + I P++ EPFGL +EA G +A+ GG DI
Sbjct: 314 TEMLSREFVRELYGSVD---FVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT-N 369
Query: 610 DNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLS 662
+ G+LV D +A+A+LK + + + R+N K FSW + + Y+
Sbjct: 370 ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVK 423
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 88.8 bits (219), Expect = 6e-19
Identities = 45/276 (16%), Positives = 90/276 (32%), Gaps = 32/276 (11%)
Query: 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSE 465
++ R + + G+ R V P GIE I + A P PP ++
Sbjct: 202 RVTTRSAKSHTAWGKAF-RTEVYPIGIEPKEIAKQA--------------AGPLPPKLAQ 246
Query: 466 IMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIM-----GNRDDID 520
+ N I ++ R D K + A+ + + +R D+
Sbjct: 247 LKAELKN--VQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQ 304
Query: 521 EMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPF 580
L ++ KY G ++ D + ++ + V + +
Sbjct: 305 AYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS-DVGLVTPLRDGM 363
Query: 581 GLTLIEAAAYGLP-----IVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DK 634
L E A P +V ++ G + L + L+V+P+D+ +A AL + ++
Sbjct: 364 NLVAKEYVAAQDPANPGVLVLSQFAGAANE---LTSALIVNPYDRDEVAAALDRALTMSL 420
Query: 635 QLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQR 670
L I + + ++S + R
Sbjct: 421 AERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 456
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 58.0 bits (138), Expect = 3e-09
Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 590 YGLPIVATKNGGPVDIHRVLDNGLLV-DPHDQQSIADALLKLVSDKQLWERCRQNGLKNI 648
GLP++ T G + G ++ +P Q+ + + L K ++ L +N
Sbjct: 292 AGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYA 351
Query: 649 HQF---SWPEHCKSYLS 662
S PE ++
Sbjct: 352 DTQDLYSLPEKAADIIT 368
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 45.9 bits (107), Expect = 5e-06
Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 17/185 (9%)
Query: 470 FSNPRKPMILALARPD-PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAA 528
F + + R D +K + L+KA +E + I+ + D + +
Sbjct: 27 FGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSL 86
Query: 529 LLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA 588
+ L + + V
Sbjct: 87 EEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMC------------- 133
Query: 589 AYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKN 647
G +A+ GG DI + G+LV D +A+A+LK + + + R+N K
Sbjct: 134 -LGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKR 191
Query: 648 IHQFS 652
FS
Sbjct: 192 AMSFS 196
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1054 | |||
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 100.0 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.98 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.98 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.97 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.97 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.97 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.95 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.94 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.94 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.94 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.91 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.9 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.87 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.86 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.85 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.82 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.52 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.42 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.39 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.28 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 99.26 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 99.05 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.95 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 98.95 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 98.88 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.86 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 98.85 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.8 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 98.68 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.62 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 98.6 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 98.59 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.56 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.46 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 98.3 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.14 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.93 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 97.93 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.15 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.71 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.57 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 96.45 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 96.3 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 96.03 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 95.96 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 95.4 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 95.22 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.03 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 95.0 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 94.93 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 94.43 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 93.9 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 93.53 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 93.44 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 93.43 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 92.85 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 92.6 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 92.54 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 92.53 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 92.25 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 91.23 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 90.28 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=0 Score=338.50 Aligned_cols=425 Identities=22% Similarity=0.293 Sum_probs=291.1
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC-CCCC
Q ss_conf 299998304444567767899898-87076899999999815999407999825767999897668763113444-3100
Q 001557 166 LYIVLISLHGLIRGENMELGRDSD-TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRK-NTEN 243 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elgr~~d-tGG~~~~v~eLa~aLa~~~Gv~~V~vit~~~~~p~~~~~~~~~~e~l~~~-~~~~ 243 (1054)
|||+++|..++ |. +||+++++..|+++|+++ | |+|+|+|+....... +....+... ..-.
T Consensus 1 MkIl~~~~~~p-----------P~~~GG~~~~~~~La~~L~~~-G-h~V~Vvtp~~~~~~~-----~~~~~~~~~~~~~~ 62 (437)
T d2bisa1 1 MKVLLLGFEFL-----------PVKVGGLAEALTAISEALASL-G-HEVLVFTPSHGRFQG-----EEIGKIRVFGEEVQ 62 (437)
T ss_dssp CEEEEECSCCT-----------TCCSSSHHHHHHHHHHHHHHT-T-CEEEEEEECTTSSCC-----EEEEEEECSSSEEE
T ss_pred CEEEEECCCCC-----------CCCCCCHHHHHHHHHHHHHHC-C-CEEEEEECCCCCCCH-----HHCCCEEECCCCCC
T ss_conf 98799877458-----------845587999999999999976-9-989999058986554-----44154022154420
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHH
Q ss_conf 0013688899199981489987553324-579974789999999999999998643159999964299975897049999
Q 001557 244 LMQGLGESSGAYIIRIPFGPKDKYVQKE-LLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAA 322 (1054)
Q Consensus 244 ~~~~~~~~~gv~i~ri~~~~~~~~l~k~-~l~~~l~~f~~~~l~~i~~~~~~L~~~~~~~~~~~pDIIh~h~~~~g~~a~ 322 (1054)
.........++.+.++..+ ++... ...+...........+.......+...+.. ...|||||+|++.++.++.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~pDiIh~~~~~~~~~~~ 136 (437)
T d2bisa1 63 VKVSYEERGNLRIYRIGGG----LLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLRE--EPLPDVVHFHDWHTVFAGA 136 (437)
T ss_dssp EEEEEEEETTEEEEEEESS----GGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTS--SCCCSEEEEETGGGHHHHH
T ss_pred EEEEEECCCCEEEEECCCC----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCEEEECCHHHHHHHH
T ss_conf 1123322588179961754----345411255311468999999899999989999840--8999789989704666765
Q ss_pred HHHCCCCCCEEEEECCCCCCHHHHH-HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCH
Q ss_conf 9972599989999279832048999-871778756465576799999999964302798995698899999954069984
Q 001557 323 LLSGALNVPMVFTGHSLGRDKLEQL-LKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401 (1054)
Q Consensus 323 ~l~~~~~iP~V~t~H~l~~~~~~~l-~~~g~~~~~~i~~~~~~~rri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~ 401 (1054)
++++..++|+|++.|++........ ............ .++..+......++.+++.+.....+.+..+.....
T Consensus 137 ~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ 210 (437)
T d2bisa1 137 LIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPY------PDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEG 210 (437)
T ss_dssp HHHHHHCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCS------SEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTT
T ss_pred HHHCCCCCCEEEEEEECCCCCCCHHHHHHCCCHHHHHH------HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
T ss_conf 43013467625899621445551233210120134567------788999888876522111102456666665134567
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEE
Q ss_conf 78999999682264457888996899499986887445899988744336799999998315777421189998689999
Q 001557 402 VLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILAL 481 (1054)
Q Consensus 402 ~~~~~l~~r~~~gv~~~g~~~~kv~vIPnGID~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IL~v 481 (1054)
++.+||||+|...|.+..... ..+.........+...+++.|+++
T Consensus 211 ----------------------ki~vi~~g~d~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~i~~~ 255 (437)
T d2bisa1 211 ----------------------KITYVFNGIDCSFWNESYLTG-------------SRDERKKSLLSKFGMDEGVTFMFI 255 (437)
T ss_dssp ----------------------TEEECCCCCCTTTSCGGGCCS-------------CHHHHHHHHHHHTTCCSCEEEEEE
T ss_pred ----------------------CEEEEECCCCCCCCCCCCCCH-------------HHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf ----------------------518970465443433222201-------------058888765455402678669873
Q ss_pred ECCC-CCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHH
Q ss_conf 2899-87899999999984402369983999-993399920220102999999999998819999788399999894999
Q 001557 482 ARPD-PKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPD 559 (1054)
Q Consensus 482 gRld-~~Kgi~~li~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~~ 559 (1054)
||+. +.||+..+++|+..+......+++.| ++|.++.. ....+..+... ....+.+.+..+.+++..
T Consensus 256 G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 324 (437)
T d2bisa1 256 GRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPE---------LEGWARSLEEK--HGNVKVITEMLSREFVRE 324 (437)
T ss_dssp SCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHH---------HHHHHHHHHHT--CTTEEEECSCCCHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC---------CCCCHHHHCCC--CCCCEECCCCCCHHHHHH
T ss_conf 0356651258999864102332333332114531022333---------32100221023--210000234576888999
Q ss_pred HHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCEEECCCEEEECCCCHHHHHHHHHHHHH-CHHHHH
Q ss_conf 9998213992999639989986899999984987999066674220120774599199999999999999981-999999
Q 001557 560 IYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWE 638 (1054)
Q Consensus 560 ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~ 638 (1054)
+|+.| |++++||..|+||++++||||||+|||+++.||..|++.+ .+|+++++.|+++++++|.++++ +++.++
T Consensus 325 ~~~~a----di~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~ll~~~~~~~~ 399 (437)
T d2bisa1 325 LYGSV----DFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSRSDLS 399 (437)
T ss_dssp HHTTC----SEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTCHHHHHHHHHHHHTTTTSCTH
T ss_pred HHHHH----CCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHEEC-CCEEEECCCCHHHHHHHHHHHHHCCHHHHH
T ss_conf 87642----2354446555642689999987998999389980773778-958997799999999999999837999999
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999860997999999999999805209
Q 001557 639 RCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQ 671 (1054)
Q Consensus 639 ~~~~~a~~~v~~fsw~~~a~~yl~~l~~l~~~~ 671 (1054)
++++++++.+++|||++++++|+++|+.+.++.
T Consensus 400 ~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r~ 432 (437)
T d2bisa1 400 KFRENCKKRAMSFSWEKSAERYVKAYTGSIDRA 432 (437)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHTCSCCB
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999996999999999999999999867
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=0 Score=352.55 Aligned_cols=450 Identities=16% Similarity=0.164 Sum_probs=272.3
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 29999830444456776789989887076899999999815999407999825767999897668763113444310000
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elgr~~dtGG~~~~v~eLa~aLa~~~Gv~~V~vit~~~~~p~~~~~~~~~~e~l~~~~~~~~~ 245 (1054)
|||++||...++ . ..+||...++.+|+++|+++ | |+|+|+|+.+.... .....+.+...........
T Consensus 1 M~i~~v~~e~~P----~-----~~~GGl~~vv~~La~~L~~~-G-h~V~Vi~P~y~~~~--~~~~~~~~~~~~~~~~~~~ 67 (477)
T d1rzua_ 1 MNVLSVSSEIYP----L-----IKTGGLADVVGALPIALEAH-G-VRTRTLIPGYPAVK--AAVTDPVKCFEFTDLLGEK 67 (477)
T ss_dssp CEEEEECSCBTT----T-----BCSSHHHHHHHHHHHHHHTT-T-CEEEEEEECCHHHH--HHCCSCEEEEEESCSSSCC
T ss_pred CEEEEEEEEEEC----C-----CCCCCHHHHHHHHHHHHHHC-C-CEEEEEECCCCCHH--HHCCCCEEEEEEECCCCCE
T ss_conf 989999772206----3-----32676899999999999976-9-96999966985344--6525665899971467854
Q ss_pred CC--CCCCCCEEEEECCCCC-----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCH
Q ss_conf 13--6888991999814899-----8755332457997478999999999999999864315999996429997589704
Q 001557 246 QG--LGESSGAYIIRIPFGP-----KDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAG 318 (1054)
Q Consensus 246 ~~--~~~~~gv~i~ri~~~~-----~~~~l~k~~l~~~l~~f~~~~l~~i~~~~~~L~~~~~~~~~~~pDIIh~h~~~~g 318 (1054)
.+ .....|+.++.+.... ...+.. .....+...+. ....+.....+.+...+. ..+|||||+|+|.++
T Consensus 68 ~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~pDIvH~h~~~~~ 142 (477)
T d1rzua_ 68 ADLLEVQHERLDLLILDAPAYYERSGGPYLG-QTGKDYPDNWK-RFAALSLAAARIGAGVLP---GWRPDMVHAHDWQAA 142 (477)
T ss_dssp EEEEEEEETTEEEEEEECHHHHCSSSCSSBC-TTSSBCTTHHH-HHHHHHHHHHHHHTTCSS---SCCCSEEEEEHHHHT
T ss_pred EEEEEEEECCEEEEEECCHHHCCCCCCCCCC-CCCCCCCCCHH-HHHHHHHHHHHHHHHCCC---CCCCCEEEECCHHHH
T ss_conf 7899999899159995582430467873557-66656652188-999999887766530256---888887993360677
Q ss_pred HHHHHH--HCCCCCCEEEEECCCCCCHHH--HHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHH
Q ss_conf 999999--725999899992798320489--99871778756465-5767999999999643027989956988999999
Q 001557 319 DAAALL--SGALNVPMVFTGHSLGRDKLE--QLLKQGRLSRDEIN-TTYKIMRRIEAEELSLDASEIVITSTRQEIEEQW 393 (1054)
Q Consensus 319 ~~a~~l--~~~~~iP~V~t~H~l~~~~~~--~l~~~g~~~~~~i~-~~~~~~rri~~E~~~l~~Ad~Vi~~S~~~~~~~~ 393 (1054)
..+..+ ++..++|+|+|.|++...... .++..-........ ........+..++.....+|.++++|....++..
T Consensus 143 l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~ 222 (477)
T d1rzua_ 143 MTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEIL 222 (477)
T ss_dssp THHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTT
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 88999998547898889998324423467888998862114440654434320568999887764442131199999999
Q ss_pred HHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHCC-
Q ss_conf 5406998478999999682264457888996899499986887445899988744336799999998-31577742118-
Q 001557 394 RLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDP-PIWSEIMHFFS- 471 (1054)
Q Consensus 394 ~~y~~~~~~~~~~l~~r~~~gv~~~g~~~~kv~vIPnGID~~~f~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~- 471 (1054)
..+.+... +...+.+. .++.+||||+|.+.|.|.....-..... ........ .......+...
T Consensus 223 ~~~~~~~~--~~~~~~~~-----------~~~~vi~ngv~~~~~~p~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~ 287 (477)
T d1rzua_ 223 TAEFGMGL--EGVIGSRA-----------HVLHGIVNGIDADVWNPATDHLIHDNYS--AANLKNRALNKKAVAEHFRID 287 (477)
T ss_dssp SHHHHTTC--HHHHHTTG-----------GGEEECCCCBCTTTSCTTTCTTSSSCCB--TTBCTTHHHHHHHHHHHHTCC
T ss_pred HHHCCCCH--HHHHHHCC-----------CCEEEEECCCCHHHCCCCCCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCC
T ss_conf 87547536--65666515-----------6479997893401205664533333310--456777666389988741446
Q ss_pred CCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCEEECCC
Q ss_conf 99986899992899878999999999844023699839999933999202201029999999999988199997883999
Q 001557 472 NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 472 ~~~~~~IL~vgRld~~Kgi~~li~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~li~~~~l~~~V~~~g~ 551 (1054)
+++.++|+++||+.+.||++.|++|+.++.+ ..+++ +++|.++.. ....+..+...+ .++|.+.+.
T Consensus 288 ~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~--~~~~l-~~~G~G~~~---------~~~~~~~~~~~~--~~~v~~~~~ 353 (477)
T d1rzua_ 288 DDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGGRL-VVLGAGDVA---------LEGALLAAASRH--HGRVGVAIG 353 (477)
T ss_dssp CSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTCEE-EEEECBCHH---------HHHHHHHHHHHT--TTTEEEEES
T ss_pred CCCCCEEEEEEEEEECCCCHHHHHHHHHHHH--HCCEE-EEEECCCCH---------HHHHHHHHHHHC--CCEEEEECC
T ss_conf 6786389998500215883799999998786--59839-999367745---------778999987635--872789715
Q ss_pred CCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCEEECC---------CEEEECCCCHHH
Q ss_conf 99894999999821399299963998998689999998498799906667422012077---------459919999999
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLD---------NGLLVDPHDQQS 622 (1054)
Q Consensus 552 ~~~~el~~ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eii~~~~---------~Gllv~p~d~~~ 622 (1054)
.+.+++..+|+.| |+||+||.+||||++++||||||+|||+++.||.+|+|.++. +|++|+|.|+++
T Consensus 354 ~~~~~~~~~~~~a----D~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~ 429 (477)
T d1rzua_ 354 YNEPLSHLMQAGC----DAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDG 429 (477)
T ss_dssp CCHHHHHHHHHHC----SEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHH
T ss_pred CCHHHHHHHHHHC----CCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCCCEEEECCCCHHH
T ss_conf 4705799999838----513488653578889999998399899907999740552487553346787448969999999
Q ss_pred HHHHHHHHHH---CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 9999999981---999999999999999860997999999999999805
Q 001557 623 IADALLKLVS---DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCK 668 (1054)
Q Consensus 623 la~aI~~ll~---d~~~~~~~~~~a~~~v~~fsw~~~a~~yl~~l~~l~ 668 (1054)
++++|.++++ ++++|+++++++++ ++|||+.++++|+++|++++
T Consensus 430 la~ai~~~l~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~~~lY~~ll 476 (477)
T d1rzua_ 430 LKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLI 476 (477)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHH
T ss_conf 999999998600799999999999998--51899999999999999984
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.1e-40 Score=282.20 Aligned_cols=365 Identities=16% Similarity=0.202 Sum_probs=250.6
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99983044445677678998988707689999999981599940799982576799989766876311344431000013
Q 001557 168 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQG 247 (1054)
Q Consensus 168 Illis~h~~~r~~~~elgr~~dtGG~~~~v~eLa~aLa~~~Gv~~V~vit~~~~~p~~~~~~~~~~e~l~~~~~~~~~~~ 247 (1054)
|+|+...++ | .||.++++.+|+++|+++ | |+|+|+|+....+
T Consensus 2 i~f~~~~y~-----------p-~GG~e~~~~~la~~L~~~-G-~~V~v~~~~~~~~------------------------ 43 (370)
T d2iw1a1 2 VAFCLYKYF-----------P-FGGLQRDFMRIASTVAAR-G-HHVRVYTQSWEGD------------------------ 43 (370)
T ss_dssp EEEECSEEC-----------T-TCHHHHHHHHHHHHHHHT-T-CCEEEEESEECSC------------------------
T ss_pred EEEEECCCC-----------C-CCCHHHHHHHHHHHHHHC-C-CEEEEEECCCCCC------------------------
T ss_conf 899914889-----------9-998999999999999977-9-9799995678778------------------------
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCC
Q ss_conf 68889919998148998755332457997478999999999999999864315999996429997589704999999725
Q 001557 248 LGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA 327 (1054)
Q Consensus 248 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~~~L~~~~~~~~~~~pDIIh~h~~~~g~~a~~l~~~ 327 (1054)
...++.+++++......+. ....|.. ...+.+.. ..+|+||.+...++.
T Consensus 44 --~~~~~~~~~~~~~~~~~~~-------~~~~~~~-------~~~~~~~~-------~~~d~v~~~~~~~~~-------- 92 (370)
T d2iw1a1 44 --CPKAFELIQVPVKSHTNHG-------RNAEYYA-------WVQNHLKE-------HPADRVVGFNKMPGL-------- 92 (370)
T ss_dssp --CCTTCEEEECCCCCSSHHH-------HHHHHHH-------HHHHHHHH-------SCCSEEEESSCCTTC--------
T ss_pred --CCCCEEEEECCCCCCCCCH-------HHHHHHH-------HHHHHHHH-------CCCCEEEECCCCCHH--------
T ss_conf --8886389986765544301-------1588999-------99999986-------165525310367237--------
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 99989999279832048999871778756465576799999999964302798995698899999954069984789999
Q 001557 328 LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 407 (1054)
Q Consensus 328 ~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~rri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l 407 (1054)
... ..++....... ....+. .......+...............++.+++.+......+...+....
T Consensus 93 ---~~~-~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 158 (370)
T d2iw1a1 93 ---DVY-FAADVCYAEKV-AQEKGF--LYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEP------- 158 (370)
T ss_dssp ---SEE-ECCSCCHHHHH-HHHCCH--HHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCG-------
T ss_pred ---HHH-HHHHCCCCEEE-EEECCC--CCCCCCHHCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCC-------
T ss_conf ---899-87622441046-630474--2000400000678899997421574699824799999998609996-------
Q ss_pred HHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH-HHHHHCCCCCCCEEEEEECCCC
Q ss_conf 996822644578889968994999868874458999887443367999999983157-7742118999868999928998
Q 001557 408 RARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS-EIMHFFSNPRKPMILALARPDP 486 (1054)
Q Consensus 408 ~~r~~~gv~~~g~~~~kv~vIPnGID~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~IL~vgRld~ 486 (1054)
.++.++|||+|...+.+.. .+.... .+..+...+++++|+++||+.+
T Consensus 159 ---------------~~i~vi~~gv~~~~~~~~~-----------------~~~~~~~~r~~~~~~~~~~~i~~~gr~~~ 206 (370)
T d2iw1a1 159 ---------------ERFQILPPGIYPDRKYSEQ-----------------IPNSREIYRQKNGIKEQQNLLLQVGSDFG 206 (370)
T ss_dssp ---------------GGEEECCCCCCGGGSGGGS-----------------CTTHHHHHHHHTTCCTTCEEEEEECSCTT
T ss_pred ---------------CEEEEEEEECCCCCCCCCC-----------------CHHHHHHHHHCCCCCCCCEEEEEEECCCC
T ss_conf ---------------4289997402222112467-----------------65666665430488866369999851455
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHC
Q ss_conf 78999999999844023699839999933999202201029999999999988199997883999998949999998213
Q 001557 487 KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 566 (1054)
Q Consensus 487 ~Kgi~~li~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~~ly~~Aa~ 566 (1054)
.||++.+++|+..+.+..+...+ +++|+++.. ..+.+++.+++...++.|.|+ .+++..+|+.|
T Consensus 207 ~Kg~~~li~a~~~l~~~~~~~~~-~ii~g~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a-- 270 (370)
T d2iw1a1 207 RKGVDRSIEALASLPESLRHNTL-LFVVGQDKP-----------RKFEALAEKLGVRSNVHFFSG--RNDVSELMAAA-- 270 (370)
T ss_dssp TTTHHHHHHHHHTSCHHHHHTEE-EEEESSSCC-----------HHHHHHHHHHTCGGGEEEESC--CSCHHHHHHHC--
T ss_pred CCCHHHHCCCCCCCCCCCCCCEE-EECCCCCCC-----------CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCC--
T ss_conf 42033320111233233221000-001122222-----------232222222222222222332--33444222333--
Q ss_pred CCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCEEECCCEEEE-CCCCHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 9929996399899868999999849879990666742201207745991-999999999999999819999999999999
Q 001557 567 TKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV-DPHDQQSIADALLKLVSDKQLWERCRQNGL 645 (1054)
Q Consensus 567 ~~Dv~i~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eii~~~~~Gllv-~p~d~~~la~aI~~ll~d~~~~~~~~~~a~ 645 (1054)
|++|+||..|+||++++|||+||+|||+++.||.+|++.++.+|+++ +|.|+++++++|.++++|++.+++++++++
T Consensus 271 --dv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~~~~~~~~~~ar 348 (370)
T d2iw1a1 271 --DLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENAR 348 (370)
T ss_dssp --SEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred --CCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf --344432222343311332145770399938997188852798369986999999999999999769999999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHH
Q ss_conf 99860997999999999999
Q 001557 646 KNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 646 ~~v~~fsw~~~a~~yl~~l~ 665 (1054)
+.++.|+|..|.+.+.++|+
T Consensus 349 ~~~~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 349 HYADTQDLYSLPEKAADIIT 368 (370)
T ss_dssp HHHHHSCCSCHHHHHHHHHH
T ss_pred HHHHHHCHHHHHHHHHHHHH
T ss_conf 99998285479999999984
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.2e-37 Score=262.82 Aligned_cols=422 Identities=15% Similarity=0.121 Sum_probs=280.1
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99998304444567767899898870768999999998159994079998257679998976687631134443100001
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elgr~~dtGG~~~~v~eLa~aLa~~~Gv~~V~vit~~~~~p~~~~~~~~~~e~l~~~~~~~~~~ 246 (1054)
|+++||... |+...+.+..||.+..+..+.+ ..+| +.+-..-...++ ..+...
T Consensus 2 rlivvsnr~-----~~~~~~~~~~gGl~~al~~~~~---~~~g---~Wvgw~g~~~~~-----~~~~~~----------- 54 (456)
T d1uqta_ 2 RLVVVSNRI-----APPDEHAASAGGLAVGILGALK---AAGG---LWFGWSGETGNE-----DQPLKK----------- 54 (456)
T ss_dssp CEEEEEEEC-----CCCC----CCCHHHHHHHHHHH---HHCE---EEEEEEEEESCC-----SSCCEE-----------
T ss_pred CEEEEECCC-----CCCCCCCCCCCCHHHHHHHHHH---HCCC---EEEECCCCCCCC-----CCHHHH-----------
T ss_conf 789997999-----9788877899618997299995---1797---899669988766-----423455-----------
Q ss_pred CCCCCCCEEEEECCCCCCC-----CCCCCCCCCCCH----------HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 3688899199981489987-----553324579974----------7899999999999999986431599999642999
Q 001557 247 GLGESSGAYIIRIPFGPKD-----KYVQKELLWPHI----------PEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIH 311 (1054)
Q Consensus 247 ~~~~~~gv~i~ri~~~~~~-----~~l~k~~l~~~l----------~~f~~~~l~~i~~~~~~L~~~~~~~~~~~pDIIh 311 (1054)
....+.....++..+.+ .-..++.+||.. .............++..+.+.+.. -|+|+
T Consensus 55 --~~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWpl~H~~~~~~~~~~~~~~~Y~~vN~~fA~~l~~~~~~-----~d~iw 127 (456)
T d1uqta_ 55 --VKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWDGYLRVNALLADKLLPLLQD-----DDIIW 127 (456)
T ss_dssp --EEETTEEEEEEEECHHHHHHHTTTHHHHTHHHHHTTCGGGCCCCHHHHHHHHHHHHHHHHHHGGGCCT-----TCEEE
T ss_pred --HHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC-----CCEEE
T ss_conf --54058516995699999999998715442621015766654403788888999999999999872568-----98699
Q ss_pred ECCCCCHHHHHHHHC-CCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH
Q ss_conf 758970499999972-5999899992798320489998717787564655767999999999643027989956988999
Q 001557 312 GHYADAGDAAALLSG-ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIE 390 (1054)
Q Consensus 312 ~h~~~~g~~a~~l~~-~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~rri~~E~~~l~~Ad~Vi~~S~~~~~ 390 (1054)
.|++....++..+.+ ..+.+++++.|..++..- .+ .. +. .. +. ....+..+|.|...+...+.
T Consensus 128 vhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~~-~f-r~--lp------~~---~~---il~~ll~~d~igf~~~~~~~ 191 (456)
T d1uqta_ 128 IHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPE-IF-NA--LP------TY---DT---LLEQLCDYDLLGFQTENDRL 191 (456)
T ss_dssp EESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHH-HH-TT--ST------TH---HH---HHHHHTTSSEEEESSHHHHH
T ss_pred EECCCHHHHHHHHHHHCCCCCEEEEECCCCCCHH-HH-CC--CC------CH---HH---HHHHHHCCCCCCCCCHHHHH
T ss_conf 9545255569999985899858999689999857-75-54--85------06---99---99776322620035899999
Q ss_pred HHHHHHCCCCHHHHHHHHH--HHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 9995406998478999999--68226445788899689949998688744589998874433679999999831577742
Q 001557 391 EQWRLYDGFDPVLERKLRA--RIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMH 468 (1054)
Q Consensus 391 ~~~~~y~~~~~~~~~~l~~--r~~~gv~~~g~~~~kv~vIPnGID~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (1054)
.+..... +.++. +...++...|+.. ++.++|+|||...|.+.... .......++..
T Consensus 192 ~fl~~~~-------~ll~~~~~~~~~i~~~gr~v-~v~~~p~GID~~~~~~~~~~--------------~~~~~~~~l~~ 249 (456)
T d1uqta_ 192 AFLDCLS-------NLTRVTTRSAKSHTAWGKAF-RTEVYPIGIEPKEIAKQAAG--------------PLPPKLAQLKA 249 (456)
T ss_dssp HHHHHHH-------HHSCEEEETTTEEEETTEEE-EEEECCCCCCHHHHHHHHHS--------------CCCHHHHHHHH
T ss_pred HHHHHHH-------HHHCCCCCCCCEEEECCCEE-EEEEECCCCCCHHHHHHCCC--------------HHHHHHHHHHH
T ss_conf 9999999-------97386112687299568155-30120676562665431140--------------77999999777
Q ss_pred HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCC--CEEEEE-ECC--CC---CHHHHHCHHHHHHHHHHHHHHC
Q ss_conf 118999868999928998789999999998440236998--399999-339--99---2022010299999999999881
Q 001557 469 FFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM-GNR--DD---IDEMSGTNAALLLSILKLIDKY 540 (1054)
Q Consensus 469 ~~~~~~~~~IL~vgRld~~Kgi~~li~A~~~l~~~~~~~--~l~LIi-G~~--~~---~~~~~~~~~~~~~~i~~li~~~ 540 (1054)
.+ .++++|+++||+++.||+..+++||+++++..+.. ++.+++ +.+ .+ +.++..+......++++.+...
T Consensus 250 ~~--~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~ 327 (456)
T d1uqta_ 250 EL--KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQL 327 (456)
T ss_dssp HT--TTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBT
T ss_pred HC--CCCEEEEEECCCCHHHCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 52--8985999937874320658999999999875843146189999748753456889999999999999987652127
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCC-----EEECCCCCCCCCEEECCCEEEE
Q ss_conf 99997883999998949999998213992999639989986899999984987-----9990666742201207745991
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLP-----IVATKNGGPVDIHRVLDNGLLV 615 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~el~~ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAmA~G~P-----VIat~~Gg~~eii~~~~~Gllv 615 (1054)
++.+.+.+.+.++++++.++|+.| |++++||++||||++++||||||+| +|+|+.+|+.+.+. +|++|
T Consensus 328 ~~~~~v~~~~~~~~~~l~a~~~~A----dv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~---~g~lV 400 (456)
T d1uqta_ 328 GWTPLYYLNQHFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIV 400 (456)
T ss_dssp TBCSEEEECSCCCHHHHHHHHHHC----SEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEE
T ss_pred CCCCEEECCCCCCHHHHHHHHHHH----CEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHC---CEEEE
T ss_conf 987502115876788876777530----54525876578883999999908988897589728978778859---76998
Q ss_pred CCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999981-9999999999999998609979999999999998052
Q 001557 616 DPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll~-d~~~~~~~~~~a~~~v~~fsw~~~a~~yl~~l~~l~~ 669 (1054)
||+|++++|+||.++|+ ++++++++.+++++.+..|++..|++.|++.++++..
T Consensus 401 nP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 455 (456)
T d1uqta_ 401 NPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVP 455 (456)
T ss_dssp CTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
T ss_conf 9599999999999997499999999999998999978999999999999875517
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=100.00 E-value=1.5e-33 Score=240.04 Aligned_cols=241 Identities=16% Similarity=0.234 Sum_probs=185.4
Q ss_pred CCEEEEEEECCCC-C-HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECC
Q ss_conf 7789999851899-9-0259999999999721589996589998689989899999927999998867998389479727
Q 001557 768 RKYVFVIAADCDT-T-SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 768 ~~kliv~DiDGTL-~-~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~~~~~D~lI~~nGs~I~~~ 845 (1054)
++.|||+|+|||| + ...++. .+++.++++. |+.|+|+|||++.++.++++.+++. .|+++||+||+.|+++
T Consensus 2 ~~~li~~DlDGTL~~~~~~~~~-~~~~~~~~~~----g~~v~i~TGR~~~~~~~~~~~~~~~--~~~~~i~~~G~~i~~~ 74 (244)
T d1s2oa1 2 RQLLLISDLDNTWVGDQQALEH-LQEYLGDRRG----NFYLAYATGRSYHSARELQKQVGLM--EPDYWLTAVGSEIYHP 74 (244)
T ss_dssp CSEEEEECTBTTTBSCHHHHHH-HHHHHHTTGG----GEEEEEECSSCHHHHHHHHHHHTCC--CCSEEEETTTTEEEET
T ss_pred CCEEEEEECCCCCCCCCCCHHH-HHHHHHHHCC----CCEEEEECCCCHHHHHHHHHHCCCC--CCCEEEECCCEEEEEC
T ss_conf 7669999896667999989899-9999999819----9989998899989999999973998--7765885162599971
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHH
Q ss_conf 99988889986200743000003456846699999986310257778667521235655751289999639999951899
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKE 925 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~kis~~~~~~~~~~~v~e 925 (1054)
. . .+..|..++.+.|..+.+..+....+....+. ...+..++++++..........++
T Consensus 75 ~---------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 132 (244)
T d1s2oa1 75 E---------G--LDQHWADYLSEHWQRDILQAIADGFEALKPQS-----------PLEQNPWKISYHLDPQACPTVIDQ 132 (244)
T ss_dssp T---------E--ECHHHHHHHHTTCCHHHHHHHHHTCTTEEECC-----------GGGCBTTBEEEEECTTSCTHHHHH
T ss_pred C---------C--CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-----------HHHHCCEEEEEECCCCCCHHHHHH
T ss_conf 6---------7--41678988878876879999985355433257-----------244062689995252115899999
Q ss_pred HHHHHHHHCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCH
Q ss_conf 99999974490999996288379971299998999999999949984678999676788661222367540899668313
Q 001557 926 LRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGE 1005 (1054)
Q Consensus 926 l~~~L~~~~~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~gVaMgNa~~ 1005 (1054)
+...+......+....+.+. .+||+|.+++||.|+++|++++|++.+++++ +||+.| | ++||+.++++|+|+||.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v~-~GD~~N-D-~~Ml~~~~~~vav~na~- 207 (244)
T d1s2oa1 133 LTEMLKETGIPVQVIFSSGK-DVDLLPQRSNKGNATQYLQQHLAMEPSQTLV-CGDSGN-D-IGLFETSARGVIVRNAQ- 207 (244)
T ss_dssp HHHHHHTSSCCEEEEEETTT-EEEEEETTCSHHHHHHHHHHHTTCCGGGEEE-EECSGG-G-HHHHTSSSEEEECTTCC-
T ss_pred HHHHHHHHCCCCEEEECCCC-EEEEEECCCCHHHHHHHHHHHCCCCHHHEEE-ECCCCC-C-HHHHHHCCCEEEECCCC-
T ss_conf 99999863234126630781-8999867641557788887741577303799-758887-7-99996189189967999-
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCC
Q ss_conf 57854101587766654468986599426469789999998715455
Q 001557 1006 SARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLK 1052 (1054)
Q Consensus 1006 ~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~aL~~~~~~~ 1052 (1054)
.+++..++. ..+...|+|+..+.+||.+||+||++|.
T Consensus 208 -~~lk~~a~~---------~~~~~~~~~~~~~~~Gi~e~l~~f~~l~ 244 (244)
T d1s2oa1 208 -PELLHWYDQ---------WGDSRHYRAQSSHAGAILEAIAHFDFLS 244 (244)
T ss_dssp -HHHHHHHHH---------HCCTTEEECSSCHHHHHHHHHHHTTCCC
T ss_pred -HHHHHHHHC---------CCCCCEEECCCCCCCHHHHHHHHHCCCC
T ss_conf -999998632---------3666537718997148999999828679
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.98 E-value=2.9e-32 Score=231.35 Aligned_cols=229 Identities=13% Similarity=0.134 Sum_probs=155.9
Q ss_pred EEEEEEECCCC-C---HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECC
Q ss_conf 89999851899-9---0259999999999721589996589998689989899999927999998867998389479727
Q 001557 770 YVFVIAADCDT-T---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 770 kliv~DiDGTL-~---~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~~~~~D~lI~~nGs~I~~~ 845 (1054)
|+||||+|||| + ..+++.++++|+++++. |+.|++||||++..+..+.+...+. .++++||+||+.||++
T Consensus 2 k~if~DlDGTL~~~~~~~i~~~~~~al~~l~~~----gi~v~~~TGR~~~~~~~l~~~~~~~--~~~~~I~~nGa~i~~~ 75 (260)
T d2rbka1 2 KALFFDIDGTLVSFETHRIPSSTIEALEAAHAK----GLKIFIATGRPKAIINNLSELQDRN--LIDGYITMNGAYCFVG 75 (260)
T ss_dssp CEEEECSBTTTBCTTTSSCCHHHHHHHHHHHHT----TCEEEEECSSCGGGCCSCHHHHHTT--CCCEEEEGGGTEEEET
T ss_pred EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHHCC--CCCCEEECCCCCCCCC
T ss_conf 299998888871899799899999999999978----8999998899889999999997158--8773476277401257
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCC-----CCCCC-------------------C--CCCCC
Q ss_conf 9998888998620074300000345684669999998631025-----77786-------------------6--75212
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVN-----DKKGE-------------------E--GKIVE 899 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~-----~~~~~-------------------~--~~~v~ 899 (1054)
+ +.+ +...++ .+.+..++.-+..... ..... . ...-.
T Consensus 76 ~---------~~i----~~~~l~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (260)
T d2rbka1 76 E---------EVI----YKSAIP----QEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSF 138 (260)
T ss_dssp T---------EEE----EECCCC----HHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCH
T ss_pred C---------CCC----CCCCCC----HHHHHHHHHHHHHCCCCEEEEECCCEEECCCHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 5---------321----046788----89999999999973986899835755413640789999998632576765677
Q ss_pred CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 35655751289999639999951899999999744909999962883799712999989999999999499846789996
Q 001557 900 EDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIA 979 (1054)
Q Consensus 900 e~~~~~~~~kis~~~~~~~~~~~v~el~~~L~~~~~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~~~viaf~ 979 (1054)
.+.......++.... . ++....+......+.+..+.+. ++||+|+++|||.||++|++++|++++++++ +
T Consensus 139 ~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~-~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a-~ 208 (260)
T d2rbka1 139 EEASNKEVIQMTPFI-------T-EEEEKEVLPSIPTCEIGRWYPA-FADVTAKGDTKQKGIDEIIRHFGIKLEETMS-F 208 (260)
T ss_dssp HHHHTSCCSEEEECC-------C-HHHHHHHGGGSTTCEEECSSTT-CCEEESTTCSHHHHHHHHHHHHTCCGGGEEE-E
T ss_pred HHHCCCCEEEEEECC-------C-HHHHHHHHHHHCCCCCEEECCC-EEEEEECCCCHHHHHHHHHHHCCCCHHHEEE-E
T ss_conf 673676469885127-------8-8999999987215540145586-7999748899999999998732235755167-6
Q ss_pred CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCC
Q ss_conf 767886612223675408996683135785410158776665446898659942646978999999871545
Q 001557 980 GECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVL 1051 (1054)
Q Consensus 980 GD~~d~D~~eML~~~g~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~aL~~~~~~ 1051 (1054)
||++| | ++||+.++.+|||+||. .++++.++ ++|+++.++||+++|+||++|
T Consensus 209 GD~~N-D-~~Ml~~a~~svav~na~--~~lk~~A~----------------~vt~~~~~~Gv~~~l~~~~~~ 260 (260)
T d2rbka1 209 GDGGN-D-ISMLRHAAIGVAMGQAK--EDVKAAAD----------------YVTAPIDEDGISKAMKHFGII 260 (260)
T ss_dssp ECSGG-G-HHHHHHSSEEEECTTSC--HHHHHHSS----------------EECCCGGGTHHHHHHHHHTCC
T ss_pred CCCCC-C-HHHHHHCCEEEEECCCC--HHHHHHCC----------------EEECCCCCCHHHHHHHHHCCC
T ss_conf 58855-5-99998489089958998--99998479----------------780888756899999985889
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.98 E-value=6.6e-31 Score=222.26 Aligned_cols=243 Identities=17% Similarity=0.156 Sum_probs=158.4
Q ss_pred EEEEEEECCCC---CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCC
Q ss_conf 89999851899---902599999999997215899965899986899898999999279999988679983894797279
Q 001557 770 YVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPS 846 (1054)
Q Consensus 770 kliv~DiDGTL---~~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~~~~~D~lI~~nGs~I~~~~ 846 (1054)
||||+|+|||| ++.+++.++++|++++++ |+.|++||||++..+.++++.++++ +++||.||+.||.+.
T Consensus 2 Kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~----Gi~~~i~TGR~~~~~~~~~~~l~~~----~~~i~~nG~~i~~~~ 73 (285)
T d1nrwa_ 2 KLIAIDLDGTLLNSKHQVSLENENALRQAQRD----GIEVVVSTGRAHFDVMSIFEPLGIK----TWVISANGAVIHDPE 73 (285)
T ss_dssp CEEEEECCCCCSCTTSCCCHHHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHGGGTCC----CEEEEGGGTEEECTT
T ss_pred EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCCC----CEEEECCCEEEEECC
T ss_conf 09999788664188794199999999999978----8999999799989999999980998----589954731699568
Q ss_pred CCCCCC--CCCC-------CCCCCCCHHH-------HCCCCCHHHHHHHHHHHHHHCCC---------------CCCC--
Q ss_conf 998888--9986-------2007430000-------03456846699999986310257---------------7786--
Q 001557 847 SSTEDN--HGLP-------FLVDLDYRFH-------TEYRWGGEGLRKTLVRWAASVND---------------KKGE-- 893 (1054)
Q Consensus 847 ~~~~~~--~~~~-------~~~d~~~~~~-------i~~~w~~e~l~~~~~~~~~~~~~---------------~~~~-- 893 (1054)
+..... ...+ .+.+..+... ....+..+.+......+.....+ ....
T Consensus 74 ~~~i~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (285)
T d1nrwa_ 74 GRLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAY 153 (285)
T ss_dssp CCEEEECCCCHHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEEE
T ss_pred CCEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEE
T ss_conf 74356416888999999999997697168741764886066377777777766405742105565333333310145201
Q ss_pred --CCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHH--HCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf --675212356557512899996399999518999999997--4490999996288379971299998999999999949
Q 001557 894 --EGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRI--QALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWG 969 (1054)
Q Consensus 894 --~~~~v~e~~~~~~~~kis~~~~~~~~~~~v~el~~~L~~--~~~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~g 969 (1054)
....+....... ....+.. ... ....+...+.. ....++++.+.+. ++||+|+++|||.|+++|++++|
T Consensus 154 ~~~~~~~~~~~~~~--~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~-~ldi~~~~~~K~~ai~~l~~~~g 226 (285)
T d1nrwa_ 154 INSFQELFEADEPI--DFYNILG-FSF---FKEKLEAGWKRYEHAEDLTLVSSAEH-NFELSSRKASKGQALKRLAKQLN 226 (285)
T ss_dssp CSCGGGGTSSSSCC--CEEEEEE-ECS---CHHHHHHHHHHHTTCTTEEEECSSTT-EEEEEETTCSHHHHHHHHHHHTT
T ss_pred ECHHHHHHHCCCCH--HHEEEEC-CCC---HHHHHHHHHHHHHCCCCEEEEEECCC-EEEEECCCCHHHHHHHHHHHHCC
T ss_conf 03188876314521--1201311-232---18999999998632797699994796-89995554023668988776505
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 9846789996767886612223675408996683135785410158776665446898659942646978999999871
Q 001557 970 IDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKL 1048 (1054)
Q Consensus 970 i~~~~viaf~GD~~d~D~~eML~~~g~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~aL~~~ 1048 (1054)
++++++++ +||+.| | ++||+.++.||||+||. .+++..++ ++|.+++++||+++|++|
T Consensus 227 i~~~~vi~-~GD~~N-D-~~Ml~~a~~svam~na~--~~~k~~A~----------------~v~~~~~~~Gv~~~l~~l 284 (285)
T d1nrwa_ 227 IPLEETAA-VGDSLN-D-KSMLEAAGKGVAMGNAR--EDIKSIAD----------------AVTLTNDEHGVAHMMKHL 284 (285)
T ss_dssp CCGGGEEE-EESSGG-G-HHHHHHSSEEEECTTCC--HHHHHHCS----------------EECCCGGGTHHHHHHHHT
T ss_pred CCCCCEEE-EECCHH-H-HHHHHHCCEEEEECCCC--HHHHHHCC----------------EECCCCCCCHHHHHHHHH
T ss_conf 57204999-929788-8-99998489189968998--99998589----------------882788755899999986
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=3.8e-30 Score=217.12 Aligned_cols=234 Identities=12% Similarity=0.118 Sum_probs=157.4
Q ss_pred CEEEEEEECCCCC---HH-HHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEC
Q ss_conf 7899998518999---02-5999999999972158999658999868998989999992799999886799838947972
Q 001557 769 KYVFVIAADCDTT---SD-FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYY 844 (1054)
Q Consensus 769 ~kliv~DiDGTL~---~~-~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~~~~~D~lI~~nGs~I~~ 844 (1054)
.|+||+|+||||. +. +.+.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||+.|+.
T Consensus 2 IKli~~DlDGTLl~~~~~~~~~~~~~~l~~l~~~----gi~~~i~TGR~~~~~~~~~~~l~~~----~~~i~~nGa~i~~ 73 (269)
T d1rlma_ 2 VKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKR----GIKFVVASGNQYYQLISFFPELKDE----ISFVAENGALVYE 73 (269)
T ss_dssp CCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHHH----TCEEEEECSSCHHHHGGGCTTTTTT----SEEEEGGGTEEEE
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCCC----CCEEEECEEEEEE
T ss_conf 7999994775672799839969999999999978----9989999599989999999982866----6267412169998
Q ss_pred CCCCCCCCCCCCCCCCCC------CH--------------HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CCC
Q ss_conf 799988889986200743------00--------------000345684669999998631025777866752123-565
Q 001557 845 PSSSTEDNHGLPFLVDLD------YR--------------FHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEE-DES 903 (1054)
Q Consensus 845 ~~~~~~~~~~~~~~~d~~------~~--------------~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~e-~~~ 903 (1054)
++...... .+..+.. +. .++..... +.............. .+.. ...
T Consensus 74 ~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~ 141 (269)
T d1rlma_ 74 HGKQLFHG---ELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAP-EAFVALMAKHYHRLK--------PVKDYQEI 141 (269)
T ss_dssp TTEEEEEC---CCCHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSC-HHHHHHHHTTCSSEE--------EESCGGGC
T ss_pred CCCEEEEE---CCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCC-HHHHHHHHHHCCCCC--------CCCCHHHH
T ss_conf 99089973---2665888999999986248429998157368846881-889999875234552--------02537662
Q ss_pred CCCCEEEEEEECCCCCCCCHHHHHHHHHHH-CCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 575128999963999995189999999974-4909999962883799712999989999999999499846789996767
Q 001557 904 RSTIHCYAFEVTNPQMIPPVKELRKLMRIQ-ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGEC 982 (1054)
Q Consensus 904 ~~~~~kis~~~~~~~~~~~v~el~~~L~~~-~~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD~ 982 (1054)
....++++.... . ....++.+.+... ...+..+.+... ++||+|+++|||.||++|++++|++++++++ +||+
T Consensus 142 ~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~di~p~~~sK~~al~~l~~~lgi~~~~vi~-~GD~ 215 (269)
T d1rlma_ 142 DDVLFKFSLNLP-D---EQIPLVIDKLHVALDGIMKPVTSGFG-FIDLIIPGLHKANGISRLLKRWDLSPQNVVA-IGDS 215 (269)
T ss_dssp CSCEEEEEEECC-G---GGHHHHHHHHHHHTTTSSEEEECSTT-EEEEECTTCSHHHHHHHHHHHHTCCGGGEEE-EECS
T ss_pred CCHHEEEEECCC-H---HHHHHHHHHHHHHHHCCEEEEEECCC-EEEEECCCHHHHHHHHHHHHHHCCCCCCEEE-ECCC
T ss_conf 210247775088-8---99999999999985153389997582-6888458657778888776650214241899-9088
Q ss_pred CCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 886612223675408996683135785410158776665446898659942646978999999871
Q 001557 983 GDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKL 1048 (1054)
Q Consensus 983 ~d~D~~eML~~~g~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~aL~~~ 1048 (1054)
.| | ++||+.++.||||+||. .+++..++ ++|.+++++||+++|+++
T Consensus 216 ~N-D-~~Ml~~ag~~vam~Na~--~~lk~~A~----------------~v~~~~~~~Gva~~i~~~ 261 (269)
T d1rlma_ 216 GN-D-AEMLKMARYSFAMGNAA--ENIKQIAR----------------YATDDNNHEGALNVIQAV 261 (269)
T ss_dssp GG-G-HHHHHHCSEEEECTTCC--HHHHHHCS----------------EECCCGGGTHHHHHHHHH
T ss_pred CC-H-HHHHHHCCEEEEECCCC--HHHHHHCC----------------EECCCCCCCHHHHHHHHH
T ss_conf 44-1-99998589189958998--99998478----------------881889845999999999
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.97 E-value=1.2e-29 Score=213.86 Aligned_cols=229 Identities=16% Similarity=0.145 Sum_probs=159.4
Q ss_pred CEEEEEEECCCC---CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECC
Q ss_conf 789999851899---90259999999999721589996589998689989899999927999998867998389479727
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 ~kliv~DiDGTL---~~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~~~~~D~lI~~nGs~I~~~ 845 (1054)
.|+|+||+|||| .+.+++.++++|+++++. + .|+|+|||++..+...+++++.. +.++||+||+.||.+
T Consensus 2 ~Kli~~DlDGTL~~~~~~i~~~~~~al~~l~~~----~-~~~i~TGR~~~~~~~~~~~~~~~---~~~~I~~nGa~i~~~ 73 (267)
T d1nf2a_ 2 YRVFVFDLDGTLLNDNLEISEKDRRNIEKLSRK----C-YVVFASGRMLVSTLNVEKKYFKR---TFPTIAYNGAIVYLP 73 (267)
T ss_dssp BCEEEEECCCCCSCTTSCCCHHHHHHHHHHTTT----S-EEEEECSSCHHHHHHHHHHHSSS---CCCEEEGGGTEEEET
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHHCCC---CCCEECCCCEEEEEC
T ss_conf 499999177565489594499999999999749----9-79998999858889999984656---773113698289954
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHC----------------------------CCCCCCCCCC
Q ss_conf 999888899862007430000034568466999999863102----------------------------5777866752
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASV----------------------------NDKKGEEGKI 897 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~----------------------------~~~~~~~~~~ 897 (1054)
+... + .......+.+.+++....... ...... ..
T Consensus 74 ~~~~--------i--------~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 135 (267)
T d1nf2a_ 74 EEGV--------I--------LNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVE--PN 135 (267)
T ss_dssp TTEE--------E--------EECCBCHHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEEC--TT
T ss_pred CCCC--------C--------CCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHHHHHHCCCCCEEC--CC
T ss_conf 6664--------3--------2457998999999999973384278740766886277488898988607872204--76
Q ss_pred CCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHC-CEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEE
Q ss_conf 1235655751289999639999951899999999744-909999962883799712999989999999999499846789
Q 001557 898 VEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQA-LRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVV 976 (1054)
Q Consensus 898 v~e~~~~~~~~kis~~~~~~~~~~~v~el~~~L~~~~-~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~~~vi 976 (1054)
..+........++.+. .++ ..++++.+.+.... ..+.+..+.+. ++||+|+++|||.||++|++++|++.++++
T Consensus 136 ~~~~~~~~~~~~i~~~-~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~-~~di~~~~~~K~~ai~~l~~~~~i~~~~vv 210 (267)
T d1nf2a_ 136 LSELVSKMGTTKLLLI-DTP---ERLDELKEILSERFKDVVKVFKSFPT-YLEIVPKNVDKGKALRFLRERMNWKKEEIV 210 (267)
T ss_dssp HHHHHHHHCBSEEEEE-CCH---HHHHHHHHHHHHHHTTTSEEEEEETT-EEEEECTTCCHHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHCCCEEEEEE-CCH---HHHHHHHHHHHHHHCCCEEEEEEECC-EEEECCCCCCHHHHHHHHHHHHCCCCCCEE
T ss_conf 8887441162378884-559---99999999998860783899996211-456558777516789999886036822089
Q ss_pred EEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHC
Q ss_conf 9967678866122236754089966831357854101587766654468986599426469789999998715
Q 001557 977 VIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 977 af~GD~~d~D~~eML~~~g~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~aL~~~~ 1049 (1054)
+ +||+.| | ++||+.++.||||+||. .+++..++ ++|.+++++|++++|+++=
T Consensus 211 a-~GD~~N-D-~~ml~~~~~sva~~na~--~~~k~~A~----------------~i~~~~~~~Gva~~i~~ll 262 (267)
T d1nf2a_ 211 V-FGDNEN-D-LFMFEEAGLRVAMENAI--EKVKEASD----------------IVTLTNNDSGVSYVLERIS 262 (267)
T ss_dssp E-EECSHH-H-HHHHTTCSEEEECTTSC--HHHHHHCS----------------EECCCTTTTHHHHHHTTBC
T ss_pred E-ECCCCC-H-HHHHHHCCCEEEECCCC--HHHHHHCC----------------EECCCCCCCHHHHHHHHHH
T ss_conf 9-808844-0-99998689089948998--99998589----------------8858887538999999998
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=2.9e-30 Score=217.92 Aligned_cols=231 Identities=12% Similarity=0.085 Sum_probs=159.4
Q ss_pred CEEEEEEECCCC---CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECC
Q ss_conf 789999851899---90259999999999721589996589998689989899999927999998867998389479727
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 ~kliv~DiDGTL---~~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~~~~~D~lI~~nGs~I~~~ 845 (1054)
.||||+|+|||| ++.+++.++++|++|+++ |+.|+++|||++..+.++++++++. ..++++|++||+.++..
T Consensus 4 iKli~~DlDGTL~~~~~~i~~~~~~al~~L~~~----gi~v~i~TGR~~~~~~~~~~~l~l~-~~~~~~i~~nGa~i~~~ 78 (271)
T d1rkqa_ 4 IKLIAIDMDGTLLLPDHTISPAVKNAIAAARAR----GVNVVLTTGRPYAGVHNYLKELHME-QPGDYCITYNGALVQKA 78 (271)
T ss_dssp CCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHT----TCEEEEECSSCGGGTHHHHHHTTCC-STTCEEEEGGGTEEEET
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCCC-CCCCEEEECCCEEEECC
T ss_conf 069999577664389795199999999999978----9999999899989999999984676-89858998685167506
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHH-------------------------------HHHHHHCCCCCCCC
Q ss_conf 99988889986200743000003456846699999-------------------------------98631025777866
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTL-------------------------------VRWAASVNDKKGEE 894 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~-------------------------------~~~~~~~~~~~~~~ 894 (1054)
.... ++ ....+..+....+. ..+........
T Consensus 79 ~~~~-------~i--------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 140 (271)
T d1rkqa_ 79 ADGS-------TV--------AQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVF--- 140 (271)
T ss_dssp TTCC-------EE--------EECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEE---
T ss_pred CCCE-------EE--------EEECCCHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCCCCC---
T ss_conf 7770-------89--------85020077888878888861640788731327740566116777777640576100---
Q ss_pred CCCCCCCC-CCCCCEEEEEEECCCCCCCCHHHHHHHHHH-HCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 75212356-557512899996399999518999999997-4490999996288379971299998999999999949984
Q 001557 895 GKIVEEDE-SRSTIHCYAFEVTNPQMIPPVKELRKLMRI-QALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDL 972 (1054)
Q Consensus 895 ~~~v~e~~-~~~~~~kis~~~~~~~~~~~v~el~~~L~~-~~~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~ 972 (1054)
...+.. ......++.+ ..++. ...++.+.+.. ....+.++.+.+. ++||+|+++|||.|+++|+++++++.
T Consensus 141 --~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~-~~~i~p~~~~K~~al~~l~~~~~i~~ 213 (271)
T d1rkqa_ 141 --CEAEKMDPNTQFLKVMM-IDEPA---ILDQAIARIPQEVKEKYTVLKSAPY-FLEILDKRVNKGTGVKSLADVLGIKP 213 (271)
T ss_dssp --CCGGGSCTTCCBCEEEE-ECCHH---HHHHHHHHSCHHHHHHEEEEEEETT-EEEEEETTCSHHHHHHHHHHHHTCCG
T ss_pred --CHHHHCCCCCCEEEEEE-ECCHH---HHHHHHHHHHHHHHCCEEEEEECCC-EEEECCCCCCCCCCCCEEHHHCCCCH
T ss_conf --31655076554589999-46777---8999999999985056389995472-68852788876542000011001142
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCC
Q ss_conf 678999676788661222367540899668313578541015877666544689865994264697899999987154
Q 001557 973 SNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGV 1050 (1054)
Q Consensus 973 ~~viaf~GD~~d~D~~eML~~~g~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~aL~~~~~ 1050 (1054)
+++++ +||+.| | ++||+.++.||||+||. .+++..++ ++|.++.++||+++|++|-+
T Consensus 214 ~~ii~-~GD~~N-D-~~ml~~~~~~~am~na~--~~lk~~a~----------------~i~~~~~~~Gv~~~l~~~~l 270 (271)
T d1rkqa_ 214 EEIMA-IGDQEN-D-IAMIEYAGVGVAVDNAI--PSVKEVAN----------------FVTKSNLEDGVAFAIEKYVL 270 (271)
T ss_dssp GGEEE-EECSGG-G-HHHHHHSSEEEECTTSC--HHHHHHCS----------------EECCCTTTTHHHHHHHHHTT
T ss_pred HCEEE-EECCHH-H-HHHHHHCCCEEEECCCC--HHHHHHCC----------------EECCCCCCCHHHHHHHHHHC
T ss_conf 01799-918676-7-99998589189967987--99998589----------------88388985839999999847
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.95 E-value=1.1e-26 Score=193.77 Aligned_cols=220 Identities=13% Similarity=0.151 Sum_probs=161.8
Q ss_pred CEEEEEEECCCC---CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECC
Q ss_conf 789999851899---90259999999999721589996589998689989899999927999998867998389479727
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 ~kliv~DiDGTL---~~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~~~~~D~lI~~nGs~I~~~ 845 (1054)
.|+|+||+|||| ...+++.+.++++.+++. |+.|+++|||++..+..+...+++. ..+|+.||+.++.+
T Consensus 3 iKli~~D~DGTL~~~~~~i~~~~~~al~~l~~~----g~~v~~~TGr~~~~~~~~~~~~~~~----~~~i~~~G~~~~~~ 74 (225)
T d1l6ra_ 3 IRLAAIDVDGNLTDRDRLISTKAIESIRSAEKK----GLTVSLLSGNVIPVVYALKIFLGIN----GPVFGENGGIMFDN 74 (225)
T ss_dssp CCEEEEEHHHHSBCTTSCBCHHHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHHTCC----SCEEEGGGTEEECT
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHCCCC----CEEEEECCEEEEEC
T ss_conf 089999658877389994799999999999877----9989998288603269999981988----52886041699967
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHH
Q ss_conf 99988889986200743000003456846699999986310257778667521235655751289999639999951899
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKE 925 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~kis~~~~~~~~~~~v~e 925 (1054)
.. . +...|..+.+.+++........... .... ........+.. ++ ...+.
T Consensus 75 ~~---------~---------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~-~~---~~~~~ 124 (225)
T d1l6ra_ 75 DG---------S---------IKKFFSNEGTNKFLEEMSKRTSMRS------ILTN--RWREASTGFDI-DP---EDVDY 124 (225)
T ss_dssp TS---------C---------EEESSCSHHHHHHHHHHTTTSSCBC------CGGG--GGCSSSEEEBC-CG---GGHHH
T ss_pred CC---------C---------EEEECCHHHHHHHHHHHHHHCCCCE------EECC--CCEEEEECCCC-CH---HHHHH
T ss_conf 95---------1---------7873686899999999987348542------4203--22023100235-89---99999
Q ss_pred HHHHHHHHCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCH
Q ss_conf 99999974490999996288379971299998999999999949984678999676788661222367540899668313
Q 001557 926 LRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGE 1005 (1054)
Q Consensus 926 l~~~L~~~~~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~gVaMgNa~~ 1005 (1054)
+...+...+ .. +...+. .+||.|.++|||.|+++|++++|++++++++ +||+.| | ++||+.++.+|+|+||.
T Consensus 125 ~~~~~~~~~--~~-i~~~~~-~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~-~GDs~n-D-~~m~~~a~~~vav~na~- 196 (225)
T d1l6ra_ 125 VRKEAESRG--FV-IFYSGY-SWHLMNRGEDKAFAVNKLKEMYSLEYDEILV-IGDSNN-D-MPMFQLPVRKACPANAT- 196 (225)
T ss_dssp HHHHHHTTT--EE-EEEETT-EEEEEETTCSHHHHHHHHHHHTTCCGGGEEE-ECCSGG-G-HHHHTSSSEEEECTTSC-
T ss_pred HHHHHHHCC--CE-EEECCC-EEEECCCCCCHHHHHHHHHHHHCCCHHHEEE-ECCCCC-H-HHHHHHCCEEEEECCCC-
T ss_conf 999874257--29-998891-7996387652278999876651002302256-448843-5-99999779089988975-
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCC
Q ss_conf 5785410158776665446898659942646978999999871545
Q 001557 1006 SARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVL 1051 (1054)
Q Consensus 1006 ~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~aL~~~~~~ 1051 (1054)
..+++.++ ++++.+..+||+++|++|++|
T Consensus 197 -~~~k~~ad----------------~v~~~~~~~gi~~~l~~~~l~ 225 (225)
T d1l6ra_ 197 -DNIKAVSD----------------FVSDYSYGEEIGQIFKHFELM 225 (225)
T ss_dssp -HHHHHHCS----------------EECSCCTTHHHHHHHHHTTCC
T ss_pred -HHHHHHCC----------------EEECCCCCCHHHHHHHHHCCC
T ss_conf -99998499----------------998989848899999986789
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.94 E-value=1.3e-25 Score=186.52 Aligned_cols=216 Identities=13% Similarity=0.045 Sum_probs=152.1
Q ss_pred CEEEEEEECCCC---CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECC
Q ss_conf 789999851899---90259999999999721589996589998689989899999927999998867998389479727
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 ~kliv~DiDGTL---~~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~~~~~D~lI~~nGs~I~~~ 845 (1054)
.|+|+||+|||| ...+++.++++|+++++. |+.|+++|||++..+..++..++++ +++||+||+.+++.
T Consensus 2 iK~i~~D~DGTL~~~~~~i~~~~~~~l~~l~~~----gi~v~~~TGR~~~~~~~~~~~~~~~----~~~i~~~g~~~~~~ 73 (230)
T d1wr8a_ 2 IKAISIDIDGTITYPNRMIHEKALEAIRRAESL----GIPIMLVTGNTVQFAEAASILIGTS----GPVVAEDGGAISYK 73 (230)
T ss_dssp CCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHT----TCCEEEECSSCHHHHHHHHHHHTCC----SCEEEGGGTEEEET
T ss_pred CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHCCCC----CCCCCCCCEEEECC
T ss_conf 369999167777379894699999999999867----9959999278688899999864887----32001222010024
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCCCHH--HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCH
Q ss_conf 99988889986200743000003456846--6999999863102577786675212356557512899996399999518
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGE--GLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPV 923 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e--~l~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~kis~~~~~~~~~~~v 923 (1054)
.. .. + ...+..+ ........++...... .. ......+.+ ..... ..
T Consensus 74 ~~---------~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~~~~-~~~~~---~~ 121 (230)
T d1wr8a_ 74 KK---------RI----F----LASMDEEWILWNEIRKRFPNARTSY--------TM---PDRRAGLVI-MRETI---NV 121 (230)
T ss_dssp TE---------EE----E----SCCCSHHHHHHHHHHHHCTTCCBCT--------TG---GGCSSCEEE-CTTTS---CH
T ss_pred CC---------CC----C----CCCCCHHHHHHHHHHHHCCCCCCEE--------EC---CCCEEEEEE-ECCCC---CH
T ss_conf 21---------00----0----2344188999999998626654214--------41---442245899-34611---69
Q ss_pred HHHHHHHHHHCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 99999999744909999962883799712999989999999999499846789996767886612223675408996683
Q 001557 924 KELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGV 1003 (1054)
Q Consensus 924 ~el~~~L~~~~~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~gVaMgNa 1003 (1054)
..+++.+........ ..+.+. .+||+|.++||+.|++++++++|++++++++ +||+.| | ++||+.++.+|+|+||
T Consensus 122 ~~~~~~~~~~~~~~~-~~~~~~-~iei~~~~~~K~~al~~l~~~~~i~~~~~~~-iGD~~N-D-i~ml~~ag~~vav~na 196 (230)
T d1wr8a_ 122 ETVREIINELNLNLV-AVDSGF-AIHVKKPWINKGSGIEKASEFLGIKPKEVAH-VGDGEN-D-LDAFKVVGYKVAVAQA 196 (230)
T ss_dssp HHHHHHHHHTTCSCE-EEECSS-CEEEECTTCCHHHHHHHHHHHHTSCGGGEEE-EECSGG-G-HHHHHHSSEEEECTTS
T ss_pred HHHHHHHHHHCCCEE-EEECCC-EEEEEECCCCCCHHHCCCCCCCCCCHHHEEE-EECCCC-H-HHHHHHCCEEEEECCC
T ss_conf 999999998366528-960894-8999407767613320112110013324256-626730-7-9999978907998898
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 13578541015877666544689865994264697899999987
Q 001557 1004 GESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEK 1047 (1054)
Q Consensus 1004 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~aL~~ 1047 (1054)
. ..++..++ +++.+.+.+||.+++++
T Consensus 197 ~--~~~k~~A~----------------~v~~~~~~~gv~~~i~~ 222 (230)
T d1wr8a_ 197 P--KILKENAD----------------YVTKKEYGEGGAEAIYH 222 (230)
T ss_dssp C--HHHHTTCS----------------EECSSCHHHHHHHHHHH
T ss_pred C--HHHHHHCC----------------EEECCCCCCHHHHHHHH
T ss_conf 7--99998579----------------99899984789999999
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.94 E-value=1.8e-25 Score=185.63 Aligned_cols=239 Identities=13% Similarity=0.064 Sum_probs=156.2
Q ss_pred CCCEEEEEEECCCC----CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCC--CCCCEEEECCCC
Q ss_conf 77789999851899----902599999999997215899965899986899898999999279999--988679983894
Q 001557 767 RRKYVFVIAADCDT----TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSP--LAFDAFICNSGS 840 (1054)
Q Consensus 767 ~~~kliv~DiDGTL----~~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~~--~~~D~lI~~nGs 840 (1054)
...|+||+|+|||| +..+++.++++|++++++ |+.|+|+|||++.++..+++++++.. ......|+.||+
T Consensus 8 ~~ikli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~----Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g~ 83 (283)
T d2b30a1 8 ADIKLLLIDFDGTLFVDKDIKVPSENIDAIKEAIEK----GYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGT 83 (283)
T ss_dssp CCCCEEEEETBTTTBCCTTTCSCHHHHHHHHHHHHH----TCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGT
T ss_pred CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
T ss_conf 596199998888884898996799999999999988----9989998699989999999984766545557743787545
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCC-------CCCC------------------CCC
Q ss_conf 797279998888998620074300000345684669999998631025-------7778------------------667
Q 001557 841 ELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVN-------DKKG------------------EEG 895 (1054)
Q Consensus 841 ~I~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~-------~~~~------------------~~~ 895 (1054)
.+|...+.. .+. ..+.......++..+..... .... ...
T Consensus 84 ~~~~~~~~~------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (283)
T d2b30a1 84 IVYDQIGYT------------LLD----ETIETDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENR 147 (283)
T ss_dssp EEECTTCCE------------EEE----CCCCHHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCC
T ss_pred EEECCCCCE------------EEE----CCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCHHHHHHHHHHHCCC
T ss_conf 898489968------------310----2568788899998877506651589973230687046327788888741165
Q ss_pred CCCC---CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH-CCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 5212---3565575128999963999995189999999974-49099999628837997129999899999999994998
Q 001557 896 KIVE---EDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQ-ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGID 971 (1054)
Q Consensus 896 ~~v~---e~~~~~~~~kis~~~~~~~~~~~v~el~~~L~~~-~~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~ 971 (1054)
..+. +........++.+. .+.. ..+++.+.+... .....+..+... ++||.|.++||+.|+++|+++++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~K~~~l~~l~~~~~i~ 222 (283)
T d2b30a1 148 SIIIRHNEMLKYRTMNKLMIV-LDPS---ESKTVIGNLKQKFKNKLTIFTTYNG-HAEVTKLGHDKYTGINYLLKHYNIS 222 (283)
T ss_dssp CEEECHHHHTTCCCCSEEEEC-CCTT---THHHHHHHHHHHSTTTEEEEECTTS-CEEEEETTCCHHHHHHHHHHHTTCC
T ss_pred CCCCCHHHHHHCCCCEEEEEE-CCHH---HHHHHHHHHHHHHCCCCEEEEECCE-EEEECCCCCHHHHHHHHHHHHCCCC
T ss_conf 533667777402661389996-6889---9999999999984566137885240-6762477650577888776641002
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC-CHHHHHHHHHHHCC
Q ss_conf 46789996767886612223675408996683135785410158776665446898659942646-97899999987154
Q 001557 972 LSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEAC-DSYDIRASLEKLGV 1050 (1054)
Q Consensus 972 ~~~viaf~GD~~d~D~~eML~~~g~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~-~~~gI~~aL~~~~~ 1050 (1054)
.+++++ +||+.| | ++||+.++.||||+||. .+++..++ ++|... +++|+++.|+++--
T Consensus 223 ~~~vi~-~GD~~N-D-~~Ml~~a~~~va~~na~--~~~k~~a~----------------~v~~~~~~~g~v~~~l~~~~~ 281 (283)
T d2b30a1 223 NDQVLV-VGDAEN-D-IAMLSNFKYSFAVANAT--DSAKSHAK----------------CVLPVSHREGAVAYLLKKVFD 281 (283)
T ss_dssp GGGEEE-EECSGG-G-HHHHHSCSEEEECTTCC--HHHHHHSS----------------EECSSCTTTTHHHHHHHHHHT
T ss_pred CCEEEE-ECCCHH-H-HHHHHHCCCEEEECCCC--HHHHHHCC----------------EEECCCCCCCHHHHHHHHHHC
T ss_conf 020799-648763-6-99998589189968998--99998489----------------999984888699999999973
Q ss_pred C
Q ss_conf 5
Q 001557 1051 L 1051 (1054)
Q Consensus 1051 ~ 1051 (1054)
|
T Consensus 282 ~ 282 (283)
T d2b30a1 282 L 282 (283)
T ss_dssp T
T ss_pred C
T ss_conf 7
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.94 E-value=2.5e-25 Score=184.70 Aligned_cols=193 Identities=24% Similarity=0.307 Sum_probs=152.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCC-CCCCHHHHHHHHHHCCCCCCCCCE
Q ss_conf 9868874458999887443367999999983157774211899986899992899-878999999999844023699839
Q 001557 431 GIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD-PKKNITTLVKAFGECRPLRELANL 509 (1054)
Q Consensus 431 GID~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IL~vgRld-~~Kgi~~li~A~~~l~~~~~~~~l 509 (1054)
|||.+.|.|..... ........+.+.+..+++++|+|+||++ ++||++.+++|+..+......+++
T Consensus 1 gid~~~~~~~~~~~-------------~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~ 67 (196)
T d2bfwa1 1 GIDCSFWNESYLTG-------------SRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEM 67 (196)
T ss_dssp CCCTTTSSGGGSCS-------------CHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGE
T ss_pred CCCHHHCCCCCCCC-------------HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCE
T ss_conf 91813308988870-------------16899999999959799988999768881104999999998864112578881
Q ss_pred EE-EEECCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHH
Q ss_conf 99-99339992022010299999999999881999978839999989499999982139929996399899868999999
Q 001557 510 TL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA 588 (1054)
Q Consensus 510 ~L-IiG~~~~~~~~~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~~ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAm 588 (1054)
.+ |+|.++. .+...+..+...+ ...+.+.+.++.+++..+|+.| |++|+|++.|+||++++|||
T Consensus 68 ~l~i~G~g~~---------~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~----di~v~ps~~e~~~~~~~Eam 132 (196)
T d2bfwa1 68 RFIIIGKGDP---------ELEGWARSLEEKH--GNVKVITEMLSREFVRELYGSV----DFVIIPSYFEPFGLVALEAM 132 (196)
T ss_dssp EEEEECCBCH---------HHHHHHHHHHHHC--TTEEEECSCCCHHHHHHHHTTC----SEEEECCSCCSSCHHHHHHH
T ss_pred EEEEEEECCC---------CHHHHHHHHHHCC--CEEEEEEECCCCCCCHHCCCCC----CCCCCCCCCCCCCCCCHHHH
T ss_conf 8999961355---------2134543322113--1157753023321100001232----33443222112332201333
Q ss_pred HCCCCEEECCCCCCCCCEEECCCEEEECCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHCCC
Q ss_conf 84987999066674220120774599199999999999999981-99999999999999986099
Q 001557 589 AYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFS 652 (1054)
Q Consensus 589 A~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~a~~~v~~fs 652 (1054)
+||+|||+++.|+..|++.+ .+|++++|.|+++++++|.+++. +++.+.++++++++++..||
T Consensus 133 ~~G~pvI~~~~~~~~e~i~~-~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 133 CLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp HTTCEEEEESCHHHHHHCCT-TTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred HCCCEEEECCCCCCCEEECC-CCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 14860465178853201028-73146789999999999999995799999999999999998378
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.91 E-value=2.7e-26 Score=191.17 Aligned_cols=211 Identities=11% Similarity=0.019 Sum_probs=127.3
Q ss_pred CEEEEEEECCCC-CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCC
Q ss_conf 789999851899-9025999999999972158999658999868998989999992799999886799838947972799
Q 001557 769 KYVFVIAADCDT-TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSS 847 (1054)
Q Consensus 769 ~kliv~DiDGTL-~~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~~~~~D~lI~~nGs~I~~~~~ 847 (1054)
.|+||+|+|||| +...++.++++|++++++ |+.|++||||++..+..+++.++++ +++||+||+.|+++.+
T Consensus 2 iKli~~DlDGTLl~~~~~~~~~~ai~~l~~~----G~~~~~aTGR~~~~~~~~~~~~~~~----~~~i~~nGa~i~~~~~ 73 (243)
T d1wzca1 2 IRLIFLDIDKTLIPGYEPDPAKPIIEELKDM----GFEIIFNSSKTRAEQEYYRKELEVE----TPFISENGSAIFIPKG 73 (243)
T ss_dssp EEEEEECCBTTTBSSSCSGGGHHHHHHHHHT----TEEEEEECSSCHHHHHHHHHHHTCC----SCEEETTTTEEEECTT
T ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHHCCC----CCCCCCCCCEEECCCC
T ss_conf 3799992777778999888999999999988----9999999198889999999983644----2100147848970898
Q ss_pred CCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC-CC------CCCCC----CCCCCCEEEEEEECC
Q ss_conf 98888998620074300000345684669999998631025777866-75------21235----655751289999639
Q 001557 848 STEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEE-GK------IVEED----ESRSTIHCYAFEVTN 916 (1054)
Q Consensus 848 ~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~-~~------~v~e~----~~~~~~~kis~~~~~ 916 (1054)
..... ..................+.+...+.............. .. ..... ......+...... .
T Consensus 74 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 149 (243)
T d1wzca1 74 YFPFD---VKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFE-W 149 (243)
T ss_dssp CCC-------------CEEEECSCCHHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSEEEECB-C
T ss_pred CEECC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHH-H
T ss_conf 43035---4306778899998752199999999765531121003134488887762476467788886313411344-4
Q ss_pred CCCCCCHHHHHHHHHHHCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHH-CCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 9999518999999997449099999628837997129999899999999994-998467899967678866122236754
Q 001557 917 PQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRW-GIDLSNVVVIAGECGDTDYEGLLGGVH 995 (1054)
Q Consensus 917 ~~~~~~v~el~~~L~~~~~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~-gi~~~~viaf~GD~~d~D~~eML~~~g 995 (1054)
. .....+ ...... + ..+.+. .++++|.+++|+.|++++++++ +++.+++++ +||+.| | ++||+.++
T Consensus 150 ~--~~~~~~---~~~~~~--~--~~~~~~-~~~~~~~~~~K~~al~~l~~~~~~~~~~~~~a-~GD~~N-D-~~Ml~~a~ 216 (243)
T d1wzca1 150 S--RDGWEE---VLVEGG--F--KVTMGS-RFYTVHGNSDKGKAAKILLDFYKRLGQIESYA-VGDSYN-D-FPMFEVVD 216 (243)
T ss_dssp S--SSCHHH---HHHHTT--C--EEEECS-SSEEEECSCCHHHHHHHHHHHHHTTSCEEEEE-EECSGG-G-HHHHTTSS
T ss_pred H--HHHHHH---HHHHCC--E--EEEECC-CCCCHHHHHCCHHHHHHHHHHHCCCCCCCEEE-ECCCHH-H-HHHHHCCC
T ss_conf 4--678998---655237--6--884236-53001031100779999999835999141999-849885-8-99998499
Q ss_pred EEEEECCCC
Q ss_conf 089966831
Q 001557 996 KTVILKGVG 1004 (1054)
Q Consensus 996 ~gVaMgNa~ 1004 (1054)
.+|||+||.
T Consensus 217 ~~va~~Na~ 225 (243)
T d1wzca1 217 KVFIVGSLK 225 (243)
T ss_dssp EEEEESSCC
T ss_pred CEEEECCCC
T ss_conf 389927998
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=7.9e-23 Score=167.89 Aligned_cols=211 Identities=13% Similarity=0.060 Sum_probs=126.0
Q ss_pred CCEEEEEEECCCC---CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEC
Q ss_conf 7789999851899---9025999999999972158999658999868998989999992799999886799838947972
Q 001557 768 RKYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYY 844 (1054)
Q Consensus 768 ~~kliv~DiDGTL---~~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~~~~~D~lI~~nGs~I~~ 844 (1054)
...|||+|+|||| ++.+++.++++|++++++ |+.|+++|||++.++.+++.++++. +.++||+||+.|+.
T Consensus 3 ~~~li~~DlDGTLl~~~~~i~~~~~~al~~l~~~----Gi~~~i~TGR~~~~~~~~~~~~~~~---~~~~i~~nGa~i~~ 75 (232)
T d1xvia_ 3 QPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREA----NVPVILCSSKTSAEMLYLQKTLGLQ---GLPLIAENGAVIQL 75 (232)
T ss_dssp CCEEEEEECTTTTSCSSCCSCCTTHHHHHHHHHT----TCCEEEECSSCHHHHHHHHHHTTCT---TSCEEEGGGTEEEC
T ss_pred CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCHHHCHHHHHHHCCC---CCEEECCCCEEEEE
T ss_conf 9879999788875289694799999999999977----9989999689736530688873457---84597169769993
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC-----------C--CCCCCCCCCCEEEE
Q ss_conf 7999888899862007430000034568466999999863102577786675-----------2--12356557512899
Q 001557 845 PSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGK-----------I--VEEDESRSTIHCYA 911 (1054)
Q Consensus 845 ~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~-----------~--v~e~~~~~~~~kis 911 (1054)
......... .... .... ....+.................... . ..........+...
T Consensus 76 ~~~~~~~~~-~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (232)
T d1xvia_ 76 AEQWQEIDG-FPRI--------ISGI-SHGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVT 145 (232)
T ss_dssp CTTCTTSTT-TTEE--------ECSS-CHHHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEE
T ss_pred CCCCCCCCH-HHHH--------HHHH-HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCEEEE
T ss_conf 577531201-4555--------5577-89999876542222202121233202355543331023013455441112453
Q ss_pred EEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHH---HCCCCCCEEEEECCCCCCCCC
Q ss_conf 99639999951899999999744909999962883799712999989999999999---499846789996767886612
Q 001557 912 FEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVR---WGIDLSNVVVIAGECGDTDYE 988 (1054)
Q Consensus 912 ~~~~~~~~~~~v~el~~~L~~~~~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~---~gi~~~~viaf~GD~~d~D~~ 988 (1054)
...... ......+...+.... . ...... ..++++|.+++|+.|+++|++. +|++.+++++ +||+.| | +
T Consensus 146 ~~~~~~--~~~~~~~~~~~~~~~--~-~~~~~~-~~~~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~ia-fGD~~N-D-l 216 (232)
T d1xvia_ 146 LIWRDS--DERMAQFTARLNELG--L-QFMQGA-RFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLG-LGDGPN-D-A 216 (232)
T ss_dssp EEECSC--HHHHHHHHHHHHHTT--E-EEEECS-SCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEE-EESSGG-G-H
T ss_pred ECCCCC--HHHHHHHHHHHHHCC--C-EEEECC-CEEECCCCCCHHHHHHHHHHHHHHHCCCCHHCEEE-ECCCHH-H-H
T ss_conf 102252--999988998765305--5-033225-30221478851789999999999975989521999-849786-8-9
Q ss_pred CCCCCCCEEEEECCCC
Q ss_conf 2236754089966831
Q 001557 989 GLLGGVHKTVILKGVG 1004 (1054)
Q Consensus 989 eML~~~g~gVaMgNa~ 1004 (1054)
+||+.++.||||+||-
T Consensus 217 ~Ml~~a~~~vaV~n~~ 232 (232)
T d1xvia_ 217 PLLEVMDYAVIVKGLN 232 (232)
T ss_dssp HHHHTSSEEEECCCCC
T ss_pred HHHHHCCEEEEEECCC
T ss_conf 9998199089971899
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.87 E-value=1e-22 Score=167.15 Aligned_cols=186 Identities=12% Similarity=0.064 Sum_probs=112.3
Q ss_pred EEEEEECCCCC--------HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEE
Q ss_conf 99998518999--------0259999999999721589996589998689989899999927999998867998389479
Q 001557 771 VFVIAADCDTT--------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSEL 842 (1054)
Q Consensus 771 liv~DiDGTL~--------~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~~~~~D~lI~~nGs~I 842 (1054)
|||||+||||. +.+++.++++|+++++ ++.|+|+|||++..+.... +. +++++|+||+.+
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~-----~~~v~i~TGR~~~~l~~~~---~~----~~~~~~~ng~~~ 69 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKE-----RFDTYIVTGRSPEEISRFL---PL----DINMICYHGACS 69 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHH-----HSEEEEECSSCHHHHHHHS---CS----SCEEEEGGGTEE
T ss_pred EEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHH-----CCCEEEECCCCHHHHHHHC---CC----CCCEEECCEEEE
T ss_conf 89999557778997896548899999999999850-----9978999699879966434---76----662896470898
Q ss_pred ECCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
Q ss_conf 72799988889986200743000003456846699999986310257778667521235655751289999639999951
Q 001557 843 YYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPP 922 (1054)
Q Consensus 843 ~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~kis~~~~~~~~~~~ 922 (1054)
+..+ ... +. .......+.++.....+........ ... .....+.+.+++.... ...
T Consensus 70 ~~~~---------~~~----~~--~~~~~~~~~~~~i~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~-~~~ 125 (229)
T d1u02a_ 70 KING---------QIV----YN--NGSDRFLGVFDRIYEDTRSWVSDFP----GLR----IYRKNLAVLYHLGLMG-ADM 125 (229)
T ss_dssp EETT---------EEE----EC--TTGGGGHHHHHHHHHHHTTHHHHST----TCE----EEEETTEEEEECTTSC-STT
T ss_pred ECCC---------CEE----EE--CCHHHHHHHHHHHHHHHHHHHCCCC----CCE----ECCCCCCEEEEEHHHH-HHH
T ss_conf 3499---------346----62--3305449999999998677650667----721----0355421342203332-445
Q ss_pred ----HHHHHHHHHHHCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEE
Q ss_conf ----8999999997449099999628837997129999899999999994998467899967678866122236754089
Q 001557 923 ----VKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTV 998 (1054)
Q Consensus 923 ----v~el~~~L~~~~~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~gV 998 (1054)
.+.+...+..... .+.+.. .++||+|+++|||.||++|+.+ +++++ +||+.| | ++||+.++.|+
T Consensus 126 ~~~~~~~l~~~~~~~~~---~~~~~~-~~idi~p~g~~Kg~al~~l~~~-----~~~i~-~GDs~N-D-~~Mf~~~~~~~ 193 (229)
T d1u02a_ 126 KPKLRSRIEEIARIFGV---ETYYGK-MIIELRVPGVNKGSAIRSVRGE-----RPAII-AGDDAT-D-EAAFEANDDAL 193 (229)
T ss_dssp HHHHHHHHHHHHHHHTC---EEEECS-SEEEEECTTCCHHHHHHHHHTT-----SCEEE-EESSHH-H-HHHHHTTTTSE
T ss_pred HHHHHHHHHHHHHCCCE---EEEEEC-EEEEEECCCCCHHHHHHHHHCC-----CCCEE-ECCCCC-H-HHHHHCCCCEE
T ss_conf 79999999998523876---999602-1899736989889999997440-----44566-438887-0-99996028828
Q ss_pred EECCCC
Q ss_conf 966831
Q 001557 999 ILKGVG 1004 (1054)
Q Consensus 999 aMgNa~ 1004 (1054)
+|+|+.
T Consensus 194 av~~g~ 199 (229)
T d1u02a_ 194 TIKVGE 199 (229)
T ss_dssp EEEESS
T ss_pred EEEECC
T ss_conf 999689
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.86 E-value=3.7e-21 Score=156.67 Aligned_cols=157 Identities=25% Similarity=0.315 Sum_probs=124.9
Q ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCEEECCCC
Q ss_conf 99868999928998789999999998440236998399999339992022010299999999999881999978839999
Q 001557 473 PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH 552 (1054)
Q Consensus 473 ~~~~~IL~vgRld~~Kgi~~li~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~li~~~~l~~~V~~~g~~ 552 (1054)
.....++|+||+.+.||++.+++|+.+++ ..++ +|+|.+.+.+.. ..+.+.+.+.. .++|.|+|++
T Consensus 10 ~~~~~~l~iGrl~~~K~~~~~i~a~~~l~----~~~l-~ivg~~~~~~~~--------~~~~~~~~~~~-~~~v~~~g~~ 75 (166)
T d2f9fa1 10 CYGDFWLSVNRIYPEKRIELQLEVFKKLQ----DEKL-YIVGWFSKGDHA--------ERYARKIMKIA-PDNVKFLGSV 75 (166)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHCT----TSCE-EEEBCCCTTSTH--------HHHHHHHHHHS-CTTEEEEESC
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHC----CCEE-EEEEECCCCCCH--------HHHHHHHCCCC-CCCEEEEECC
T ss_conf 99999999923754349999999999833----9749-999722445422--------33332202356-6758874212
Q ss_pred CCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCEEECCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf 98949999998213992999639989986899999984987999066674220120774599199999999999999981
Q 001557 553 KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS 632 (1054)
Q Consensus 553 ~~~el~~ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~ 632 (1054)
+.+++..+|+.| |++|+||..|+||++++|||+||+|||+++.++..|++.++.+|+++++ |+++++++|.++++
T Consensus 76 ~~~~~~~~~~~a----d~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i~~l~~ 150 (166)
T d2f9fa1 76 SEEELIDLYSRC----KGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVSK 150 (166)
T ss_dssp CHHHHHHHHHHC----SEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCC-CHHHHHHHHHHHHH
T ss_conf 211122222222----2233212211233221101122332205527864033048841246899-99999999999980
Q ss_pred CHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999999998609
Q 001557 633 DKQLWERCRQNGLKNIHQF 651 (1054)
Q Consensus 633 d~~~~~~~~~~a~~~v~~f 651 (1054)
+++. +++++.+.+++|
T Consensus 151 ~~~~---~~~~~~~~a~~f 166 (166)
T d2f9fa1 151 NPDK---FKKDCFRRAKEF 166 (166)
T ss_dssp CTTT---THHHHHHHHHTC
T ss_pred CHHH---HHHHHHHHHHCC
T ss_conf 9999---999999998579
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=3.4e-21 Score=156.93 Aligned_cols=208 Identities=9% Similarity=-0.009 Sum_probs=111.8
Q ss_pred EEEEEEECCCC---CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHH-HHCCCCCCCCCEEEECCCCEEECC
Q ss_conf 89999851899---90259999999999721589996589998689989899999-927999998867998389479727
Q 001557 770 YVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLL-VSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 770 kliv~DiDGTL---~~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l-~~~~l~~~~~D~lI~~nGs~I~~~ 845 (1054)
-|++||+|||| .+.+++.++++|++++++ |+.| ++|||.+..+...+ ..+++. ..+.+++|++|+.++..
T Consensus 2 ~i~lFDlDGTLl~~~~~is~~~~~~i~~l~~~----g~~~-i~tgrr~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~ 75 (244)
T d2fuea1 2 VLCLFDVDGTLTPARQKIDPEVAAFLQKLRSR----VQIG-VVGGSDYCKIAEQLGDGDEVI-EKFDYVFAENGTVQYKH 75 (244)
T ss_dssp EEEEEESBTTTBSTTSCCCHHHHHHHHHHTTT----SEEE-EECSSCHHHHHHHHSSTTTHH-HHCSEEEEGGGTEEEET
T ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEE-EEECCCHHHHHHHHHHHHCCC-CCCCEEECCCCEEECCC
T ss_conf 79998445683499895899999999999868----9999-996698065134566542334-55422311440023037
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC----
Q ss_conf 9998888998620074300000345684669999998631025777866752123565575128999963999995----
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIP---- 921 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~kis~~~~~~~~~~---- 921 (1054)
+ .......+............................ .... .........+.........
T Consensus 76 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 139 (244)
T d2fuea1 76 G---------RLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKK------RGTF-IEFRNGMLNISPIGRSCTLEERI 139 (244)
T ss_dssp T---------EECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCC------CSCS-EEECSSCEEECSSCTTCCHHHHH
T ss_pred C---------CCCEEECHHHHHHHHHHHHHHHHHHHHHHEECCCCC------CCCH-HHHHHHHHHCCCCCCCCCHHHHH
T ss_conf 8---------512120135777666777777642333101102211------2421-23444442023223332034545
Q ss_pred ----------CHHHHHHHHHHH--CCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECC---CCCCC
Q ss_conf ----------189999999974--490999996288379971299998999999999949984678999676---78866
Q 001557 922 ----------PVKELRKLMRIQ--ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE---CGDTD 986 (1054)
Q Consensus 922 ----------~v~el~~~L~~~--~~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD---~~d~D 986 (1054)
...+....+... .....+..+.. .++||+|+++|||.||++|++ ++++++++|||+ ++| |
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lei~~~~vsKg~al~~L~~---~~~~ev~afGD~~~~G~N-D 214 (244)
T d2fuea1 140 EFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGM-ISFDVFPEGWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGN-D 214 (244)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHTTTSCEEEECCSS-SCEEEEETTCSTTHHHHHHTT---SCCSEEEEEESCCSTTST-T
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCC-CCCEECCHHCCHHHHHHHHHC---CCHHHEEEECCCCCCCCC-C
T ss_conf 66653001036788899999885103426764167-600320322027899999966---984459998688999997-2
Q ss_pred CCCCCCCCC-EEEEECCCCH
Q ss_conf 122236754-0899668313
Q 001557 987 YEGLLGGVH-KTVILKGVGE 1005 (1054)
Q Consensus 987 ~~eML~~~g-~gVaMgNa~~ 1005 (1054)
++||+.++ .|++|+||..
T Consensus 215 -~eml~~a~~~~~av~na~~ 233 (244)
T d2fuea1 215 -FEIFADPRTVGHSVVSPQD 233 (244)
T ss_dssp -HHHHHSTTSEEEECSSHHH
T ss_pred -HHHHHCCCCCEEECCCHHH
T ss_conf -9999717985899189899
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=5.5e-20 Score=148.76 Aligned_cols=204 Identities=9% Similarity=0.028 Sum_probs=116.2
Q ss_pred CCEEEEEEECCCC---CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEC
Q ss_conf 7789999851899---9025999999999972158999658999868998989999992799999886799838947972
Q 001557 768 RKYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYY 844 (1054)
Q Consensus 768 ~~kliv~DiDGTL---~~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~~~~~D~lI~~nGs~I~~ 844 (1054)
..||++||+|||| .+.+++.++++|++++++ |+ ++++|||++..+...+.+.... .+.++++++|+.++.
T Consensus 2 ~~kl~~fDlDGTLl~~~~~i~~~~~~al~~l~~~----g~-~~i~Tgr~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 74 (243)
T d2amya1 2 GPALCLFDVDGTLTAPRQKITKEMDDFLQKLRQK----IK-IGVVGGSDFEKVQEQLGNDVVE--KYDYVFPENGLVAYK 74 (243)
T ss_dssp CSEEEEEESBTTTBCTTSCCCHHHHHHHHHHTTT----SE-EEEECSSCHHHHHHHHCTTHHH--HCSEEESGGGTEEEE
T ss_pred CCEEEEECCCCCEECCCCCCCHHHHHHHHHHHCC----CC-EEEECCCCHHHHHHHHHHHCCC--CCEEEECCCEEEEEC
T ss_conf 9879998674782089994899999999999809----98-9999589868867887652165--642995274799933
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHH----HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
Q ss_conf 7999888899862007430000034568466999999----863102577786675212356557512899996399999
Q 001557 845 PSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLV----RWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMI 920 (1054)
Q Consensus 845 ~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~----~~~~~~~~~~~~~~~~v~e~~~~~~~~kis~~~~~~~~~ 920 (1054)
.+ +.. +...+......+....... .......... .............+........
T Consensus 75 ~~---------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 134 (243)
T d2amya1 75 DG---------KLL----CRQNIQSHLGEALIQDLINYCLSYIAKIKLPKK-------RGTFIEFRNGMLNVSPIGRSCS 134 (243)
T ss_dssp TT---------EEE----EECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCC-------CSCSEEEETTEEEECSSCTTCC
T ss_pred CC---------CCC----EECCHHHHHHHHHHHHHHHHHHHHHEECCCCCC-------CCCHHHHHHHHHCCCCCCCCCC
T ss_conf 88---------511----100012888888988887640001000145312-------2202231011211222222354
Q ss_pred --------------CCHHHHHHHHHHHC--CEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECC---
Q ss_conf --------------51899999999744--90999996288379971299998999999999949984678999676---
Q 001557 921 --------------PPVKELRKLMRIQA--LRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE--- 981 (1054)
Q Consensus 921 --------------~~v~el~~~L~~~~--~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD--- 981 (1054)
....+....+.... ..+.+..+... ++||+|+++|||.||++|+ +++.+++++|||+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lei~~~~vsKg~al~~l~---~~~~~ev~afGD~~~~ 210 (243)
T d2amya1 135 QEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQI-SFDVFPDGWDKRYCLRHVE---NDGYKTIYFFGDKTMP 210 (243)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHTTTSCEEEEEETTT-EEEEEETTCSGGGGGGGTT---TSCCSEEEEEECSCC-
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCC-CCEEECCCCCHHHHHHHHH---CCCCCEEEEECCCCCC
T ss_conf 23301232110010335899999998713455279952896-4155132167899999984---8993629998689999
Q ss_pred CCCCCCCCCCCCCC-EEEEECCCC
Q ss_conf 78866122236754-089966831
Q 001557 982 CGDTDYEGLLGGVH-KTVILKGVG 1004 (1054)
Q Consensus 982 ~~d~D~~eML~~~g-~gVaMgNa~ 1004 (1054)
++| | ++||+.++ .+++|+|+.
T Consensus 211 g~N-D-i~Ml~~~g~~~~~v~~~~ 232 (243)
T d2amya1 211 GGN-D-HEIFTDPRTMGYSVTAPE 232 (243)
T ss_dssp --C-C-CHHHHCTTEEEEECSSHH
T ss_pred CCC-C-HHHHHCCCCCEEEECCHH
T ss_conf 997-6-999971597299907999
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.52 E-value=5.1e-11 Score=88.40 Aligned_cols=81 Identities=16% Similarity=0.094 Sum_probs=62.4
Q ss_pred CCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCC--------CCCEEECCCEE
Q ss_conf 9997883999998949999998213992999639989986899999984987999066674--------22012077459
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP--------VDIHRVLDNGL 613 (1054)
Q Consensus 542 l~~~V~~~g~~~~~el~~ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~--------~eii~~~~~Gl 613 (1054)
..+++.+.++++ ...++..+ |+||.. +-..++.||+++|+|+|+....+- .+.+...+.|+
T Consensus 268 ~~~~v~i~~~~p---~~~ll~~a----~~~v~h----gG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~ 336 (391)
T d1pn3a_ 268 DGADCFVVGEVN---LQELFGRV----AAAIHH----DSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGV 336 (391)
T ss_dssp CCTTCCEESSCC---HHHHHTTS----SCEEEE----SCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEE
T ss_pred CCCCEEEECCCC---HHHHHHHC----CEEEEC----CCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCEE
T ss_conf 889889954468---79998425----489852----7437999999828868993355677452999999999879889
Q ss_pred EECCCC--HHHHHHHHHHHHHC
Q ss_conf 919999--99999999999819
Q 001557 614 LVDPHD--QQSIADALLKLVSD 633 (1054)
Q Consensus 614 lv~p~d--~~~la~aI~~ll~d 633 (1054)
.+++.+ +++++++|.+++++
T Consensus 337 ~l~~~~~~~~~l~~~i~~~l~~ 358 (391)
T d1pn3a_ 337 AVDGPVPTIDSLSAALDTALAP 358 (391)
T ss_dssp EECCSSCCHHHHHHHHHHHTST
T ss_pred ECCCCCCCHHHHHHHHHHHHCH
T ss_conf 7685789999999999998399
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.42 E-value=4.3e-11 Score=88.93 Aligned_cols=110 Identities=13% Similarity=0.047 Sum_probs=74.5
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC----CCCCEEECCCEEEEC
Q ss_conf 9999788399999894999999821399299963998998689999998498799906667----422012077459919
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVDIHRVLDNGLLVD 616 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~el~~ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAmA~G~PVIat~~Gg----~~eii~~~~~Gllv~ 616 (1054)
.+.+++.+.+++|+ ..++..+ |+||. .|...++.||+++|+|+|+....+ ..+.++..+.|+.++
T Consensus 283 ~~~~~v~~~~~~p~---~~ll~~~----~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~ 351 (401)
T d1rrva_ 283 DDRDDCFAIDEVNF---QALFRRV----AAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHD 351 (401)
T ss_dssp CCCTTEEEESSCCH---HHHGGGS----SEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECS
T ss_pred CCCCCEEEEECCCC---HHHHHHC----CEEEE----CCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCEEECC
T ss_conf 57898899731481---7776212----48886----1772489999983999898066120899999999879889757
Q ss_pred CC--CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 99--9999999999998199999999999999986099799999999999980
Q 001557 617 PH--DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 617 p~--d~~~la~aI~~ll~d~~~~~~~~~~a~~~v~~fsw~~~a~~yl~~l~~l 667 (1054)
.. +++.++++|.++++ ++ +++++++..+...- .-+.+-.+++++.
T Consensus 352 ~~~~~~~~L~~ai~~vl~-~~----~r~~a~~~~~~~~~-~g~~~aa~~ie~~ 398 (401)
T d1rrva_ 352 GPTPTFESLSAALTTVLA-PE----TRARAEAVAGMVLT-DGAAAAADLVLAA 398 (401)
T ss_dssp SSCCCHHHHHHHHHHHTS-HH----HHHHHHHHTTTCCC-CHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHC-HH----HHHHHHHHHHHHHH-CCHHHHHHHHHHH
T ss_conf 478999999999999849-79----99999999998755-1799999999998
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.39 E-value=1.7e-09 Score=78.23 Aligned_cols=330 Identities=13% Similarity=0.065 Sum_probs=174.9
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 87076899999999815999407999825767999897668763113444310000136888991999814899875533
Q 001557 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 269 (1054)
Q Consensus 190 tGG~~~~v~eLa~aLa~~~Gv~~V~vit~~~~~p~~~~~~~~~~e~l~~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~ 269 (1054)
|||+......|+++|.++ | |+|.+++... +.....+ ...|..+..++.........
T Consensus 10 tGGHv~~a~al~~~L~~~-G-~eV~~i~~~~---------~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~ 65 (351)
T d1f0ka_ 10 TGGHVFPGLAVAHHLMAQ-G-WQVRWLGTAD---------RMEADLV-------------PKHGIEIDFIRISGLRGKGI 65 (351)
T ss_dssp SHHHHHHHHHHHHHHHTT-T-CEEEEEECTT---------STHHHHG-------------GGGTCEEEECCCCCCTTCCH
T ss_pred CHHHHHHHHHHHHHHHHC-C-CEEEEEEECC---------CCHHHCC-------------CCCCCCEEEEECCCCCCCCH
T ss_conf 589899999999999858-9-9899999588---------3243223-------------50499579997888677777
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 24579974789999999999999998643159999964299975897049999997259998999927983204899987
Q 001557 270 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLK 349 (1054)
Q Consensus 270 k~~l~~~l~~f~~~~l~~i~~~~~~L~~~~~~~~~~~pDIIh~h~~~~g~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~ 349 (1054)
...++. . ......+....+.+.+ .+||++.+........+...+..+++|.+...++.......
T Consensus 66 ~~~~~~-~----~~~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~~~~~~---- 129 (351)
T d1f0ka_ 66 KALIAA-P----LRIFNAWRQARAIMKA-------YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTN---- 129 (351)
T ss_dssp HHHHTC-H----HHHHHHHHHHHHHHHH-------HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCCHHH----
T ss_pred HHHHHH-H----HHHHHHHHHHHHHHHC-------CCCCEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHH----
T ss_conf 999999-9----8877767777887631-------34430011032211344545540564346322212310467----
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEC
Q ss_conf 17787564655767999999999643027989956988999999540699847899999968226445788899689949
Q 001557 350 QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 429 (1054)
Q Consensus 350 ~g~~~~~~i~~~~~~~rri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~r~~~gv~~~g~~~~kv~vIP 429 (1054)
+ .....++.+....... . .....+.
T Consensus 130 ----------------~------~~~~~~~~~~~~~~~~--------~-------------------------~~~~~~~ 154 (351)
T d1f0ka_ 130 ----------------K------WLAKIATKVMQAFPGA--------F-------------------------PNAEVVG 154 (351)
T ss_dssp ----------------H------HHTTTCSEEEESSTTS--------S-------------------------SSCEECC
T ss_pred ----------------H------HHHHHCCEEECCCCCC--------C-------------------------CCEEEEC
T ss_conf ----------------7------7654134011023566--------5-------------------------3003876
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCH-HHHHHHHHHCCCCCCCCC
Q ss_conf 9986887445899988744336799999998315777421189998689999289987899-999999984402369983
Q 001557 430 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNI-TTLVKAFGECRPLRELAN 508 (1054)
Q Consensus 430 nGID~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IL~vgRld~~Kgi-~~li~A~~~l~~~~~~~~ 508 (1054)
+......+.. +.. ..+.....++..++.+|.-.....+ ..+.+.+..+. . ..
T Consensus 155 ~~~~~~~~~~--------------------~~~---~~~~~~~~~~~~i~~~~gs~g~~~~~~~~~~~~~~l~---~-~~ 207 (351)
T d1f0ka_ 155 NPVRTDVLAL--------------------PLP---QQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLG---D-SV 207 (351)
T ss_dssp CCCCHHHHTS--------------------CCH---HHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHG---G-GE
T ss_pred CCCCCCCCCC--------------------HHH---HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC---C-CC
T ss_conf 7764310000--------------------057---7653203587431334454013466888887666524---5-53
Q ss_pred EEEEEECCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHH
Q ss_conf 99999339992022010299999999999881999978839999989499999982139929996399899868999999
Q 001557 509 LTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA 588 (1054)
Q Consensus 509 l~LIiG~~~~~~~~~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~~ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAm 588 (1054)
..++++...... ........ ....++...++ .+++.+++..| |++|.- +-+.++.|++
T Consensus 208 ~~i~~~~~~~~~----------~~~~~~~~--~~~~~~~v~~f--~~~~~~lm~~a----dl~It~----~G~~T~~Eal 265 (351)
T d1f0ka_ 208 TIWHQSGKGSQQ----------SVEQAYAE--AGQPQHKVTEF--IDDMAAAYAWA----DVVVCR----SGALTVSEIA 265 (351)
T ss_dssp EEEEECCTTCHH----------HHHHHHHH--TTCTTSEEESC--CSCHHHHHHHC----SEEEEC----CCHHHHHHHH
T ss_pred EEEEECCCCCHH----------HHHHHHCC--CCCCCCEEEEE--HHHHHHHHHHC----CHHHCC----CCCHHHHHHH
T ss_conf 045421341044----------43343202--33223155543--05589999747----422205----5423778888
Q ss_pred HCCCCEEECCCCC-C------CCCEEECCCEEEECCC--CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 8498799906667-4------2201207745991999--99999999999981999999999999999860997999999
Q 001557 589 AYGLPIVATKNGG-P------VDIHRVLDNGLLVDPH--DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKS 659 (1054)
Q Consensus 589 A~G~PVIat~~Gg-~------~eii~~~~~Gllv~p~--d~~~la~aI~~ll~d~~~~~~~~~~a~~~v~~fsw~~~a~~ 659 (1054)
++|+|+|...... . .+.+...+.|+.++.. +.+.+.++|..+ +++...+|++++++......++..++.
T Consensus 266 ~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l--~~~~~~~~~~~~~~~~~~~~a~~i~~~ 343 (351)
T d1f0ka_ 266 AAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDATERVANE 343 (351)
T ss_dssp HHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred HHCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECHHHCCHHHHHHHHHHH--CHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 717854654154677669999999998899899223319999999999863--999999999998726995699999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q 001557 660 YLSRIS 665 (1054)
Q Consensus 660 yl~~l~ 665 (1054)
.+++.+
T Consensus 344 i~~l~~ 349 (351)
T d1f0ka_ 344 VSRVAR 349 (351)
T ss_dssp HHHHHT
T ss_pred HHHHHH
T ss_conf 999984
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.28 E-value=3e-13 Score=103.45 Aligned_cols=78 Identities=13% Similarity=0.147 Sum_probs=59.3
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 97129999899999999994998467899967678866122236754089966831357854101587766654468986
Q 001557 949 HVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHN 1028 (1054)
Q Consensus 949 EV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~ 1028 (1054)
...+...+|+.+.+.++.+++++++++++ +||+.| | ++||+.+|.|||| |+. .+++..+..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~i~~~evia-iGDg~N-D-i~Ml~~Ag~gIAm-na~--~~v~~~~~~------------- 182 (206)
T d1rkua_ 122 RVVGYQLRQKDPKRQSVIAFKSLYYRVIA-AGDSYN-D-TTMLSEAHAGILF-HAP--ENVIREFPQ------------- 182 (206)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHTTCEEEE-EECSST-T-HHHHHHSSEEEEE-SCC--HHHHHHCTT-------------
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCCCEEE-ECCCCC-C-HHHHHHCCCCEEE-CCC--HHHHHHCCC-------------
T ss_conf 45432112014578899986425652188-438732-7-9999858940997-897--799986789-------------
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 59942646978999999871
Q 001557 1029 VIQVDEACDSYDIRASLEKL 1048 (1054)
Q Consensus 1029 ~~~~t~~~~~~gI~~aL~~~ 1048 (1054)
+++ ....+++.++|.+.
T Consensus 183 --~~~-~~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 183 --FPA-VHTYEDLKREFLKA 199 (206)
T ss_dssp --SCE-ECSHHHHHHHHHHH
T ss_pred --CEE-ECCHHHHHHHHHHH
T ss_conf --556-26889999999997
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.26 E-value=4.4e-09 Score=75.38 Aligned_cols=153 Identities=14% Similarity=0.040 Sum_probs=90.3
Q ss_pred CCCCEEEEEECCC-CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCEEECCC
Q ss_conf 9986899992899-878999999999844023699839999933999202201029999999999988199997883999
Q 001557 473 PRKPMILALARPD-PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 473 ~~~~~IL~vgRld-~~Kgi~~li~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~li~~~~l~~~V~~~g~ 551 (1054)
....++++.|... ..+....+++++..+. ..+.++.+.... ....+.+++.+.++
T Consensus 237 ~~~~i~~~~~~~~~~~~~~~~~~~al~~~~-----~~~~~~~~~~~~-------------------~~~~~~~nv~~~~~ 292 (401)
T d1iira_ 237 GPPPVYLGFGSLGAPADAVRVAIDAIRAHG-----RRVILSRGWADL-------------------VLPDDGADCFAIGE 292 (401)
T ss_dssp SSCCEEEECC---CCHHHHHHHHHHHHHTT-----CCEEECTTCTTC-------------------CCSSCGGGEEECSS
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHCC-----CEEEEECCCCCC-------------------CCCCCCCCEEEEEC
T ss_conf 897599715754665689999999999769-----807984267764-------------------23357897899702
Q ss_pred CCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC----CCCCEEECCCEEEECCC--CHHHHHH
Q ss_conf 99894999999821399299963998998689999998498799906667----42201207745991999--9999999
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVDIHRVLDNGLLVDPH--DQQSIAD 625 (1054)
Q Consensus 552 ~~~~el~~ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAmA~G~PVIat~~Gg----~~eii~~~~~Gllv~p~--d~~~la~ 625 (1054)
.| ..++|..+ |+||. .|...++.|++++|+|+|+....+ ....++..+.|+.++.. +++++++
T Consensus 293 ~p---~~~~l~~~----~~~V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ 361 (401)
T d1iira_ 293 VN---HQVLFGRV----AAVIH----HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSA 361 (401)
T ss_dssp CC---HHHHGGGS----SEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHH
T ss_pred CC---HHHHHHHC----CEEEE----CCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHH
T ss_conf 58---79999545----89996----377169999998199999806614179999999987988876847899999999
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHH---CCCHHHHHHHHHHHHH
Q ss_conf 999998199999999999999986---0997999999999999
Q 001557 626 ALLKLVSDKQLWERCRQNGLKNIH---QFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 626 aI~~ll~d~~~~~~~~~~a~~~v~---~fsw~~~a~~yl~~l~ 665 (1054)
+|.+++++ +. ++++++..+ ..+-...++.+++.+.
T Consensus 362 ai~~~l~~-~~----~~~a~~~~~~~~~~~~~~aa~~i~~~i~ 399 (401)
T d1iira_ 362 ALATALTP-ET----HARATAVAGTIRTDGAAVAARLLLDAVS 399 (401)
T ss_dssp HHHHHTSH-HH----HHHHHHHHHHSCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHCH-HH----HHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 99999697-99----9999999999875083999999999984
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=99.05 E-value=1.9e-08 Score=71.16 Aligned_cols=226 Identities=14% Similarity=0.065 Sum_probs=133.4
Q ss_pred HHHHCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC-CC-------
Q ss_conf 9643027989956988999999540699847899999968226445788899689949998688744589-99-------
Q 001557 372 ELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHN-GD------- 443 (1054)
Q Consensus 372 ~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~r~~~gv~~~g~~~~kv~vIPnGID~~~f~p~~-~~------- 443 (1054)
..++..+..|-.+|+-..+-........- +..+..++.-|-|||....+.... +.
T Consensus 408 ~LAl~~S~~vNGVSklH~ev~~~~~~~~~-----------------~~~~p~~i~~ITNGVh~~~Wl~~~n~~L~~l~~~ 470 (796)
T d1l5wa_ 408 NLCVVGGFAVNGVAALHSDLVVKDLFPEY-----------------HQLWPNKFHNVTNGITPRRWIKQCNPALAALLDK 470 (796)
T ss_dssp HHHHHHSSEEEESSHHHHHHHHHTTSHHH-----------------HHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------CCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHH
T ss_conf 99998604667999999999998753312-----------------5568766434456615778874327899999876
Q ss_pred --------CCCCCCCCCCCCCCCCCCHHHHH------------------HHHCCCCCCCEEEEEECCCCCCCHHHHHHHH
Q ss_conf --------88744336799999998315777------------------4211899986899992899878999999999
Q 001557 444 --------VDGEVERDEGSPASPDPPIWSEI------------------MHFFSNPRKPMILALARPDPKKNITTLVKAF 497 (1054)
Q Consensus 444 --------~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~IL~vgRld~~Kgi~~li~A~ 497 (1054)
....+...... ...+..++.+ .....+|+...++++-|+...|...+++.-.
T Consensus 471 ~ig~~w~~~~~~l~~~~~~--~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~LtigfaRRfa~YKR~~L~~~~i 548 (796)
T d1l5wa_ 471 SLQKEWANDLDQLINLEKF--ADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHI 548 (796)
T ss_dssp HCSSCCTTCGGGGGGGGGG--GGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHH
T ss_pred HCCCCCCCCHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHCCCCHHHHH
T ss_conf 4565213477889988863--68799999999999999999999999852963585651403434544431453035359
Q ss_pred H----HCCCCC--CCCCEEEEEECCCCCHHHHHCHHHHHHHHHHHHHHCCC------CCCEEECCCCCCCCHHHHHHHHH
Q ss_conf 8----440236--99839999933999202201029999999999988199------99788399999894999999821
Q 001557 498 G----ECRPLR--ELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDL------YGQVAYPKHHKQSDVPDIYRLAA 565 (1054)
Q Consensus 498 ~----~l~~~~--~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~li~~~~l------~~~V~~~g~~~~~el~~ly~~Aa 565 (1054)
. .+.... +...+++|.++....... ...+++..|....+..+. ..+|.|+...+-+--..++..|
T Consensus 549 ~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~--~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYdv~lA~~lv~g~- 625 (796)
T d1l5wa_ 549 LALYKEIRENPQADRVPRVFLFGAKAAPGYY--LAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAA- 625 (796)
T ss_dssp HHHHHHHHTCTTCCCCCEEEEEECCCCTTCH--HHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGC-
T ss_pred HHHHHHHHCCCCCCCCCEEEEECCCCCCCHH--HHHHHHHHHHHHHHHHCCCHHHCCCEEEEEECCCCHHHHHHHHCCC-
T ss_conf 9999998508645778659997488898317--8999999999999986178554363338980787568999874401-
Q ss_pred CCCCEEEECCC--CCCCCHHHHHHHHCCCCEEECCCCCCCCCEEE--CCCEEEECCCCHHHH
Q ss_conf 39929996399--89986899999984987999066674220120--774599199999999
Q 001557 566 KTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDNGLLVDPHDQQSI 623 (1054)
Q Consensus 566 ~~~Dv~i~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eii~~--~~~Gllv~p~d~~~l 623 (1054)
||.+++|. .|..|..-+-|+..|.+.+++..|...|+.+. +.||+.+- .+.+++
T Consensus 626 ---DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~fG-~~~~ev 683 (796)
T d1l5wa_ 626 ---DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFG-HTVEQV 683 (796)
T ss_dssp ---SEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS-CCHHHH
T ss_pred ---CHHHHCCCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCEEEEC-CCHHHH
T ss_conf ---2654099987345782677999859716604664479888863745368806-866777
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.95 E-value=1.6e-10 Score=85.10 Aligned_cols=78 Identities=13% Similarity=0.090 Sum_probs=64.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 79971299998999999999949984678999676788661222367540899668313578541015877666544689
Q 001557 947 KLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDS 1026 (1054)
Q Consensus 947 ~lEV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~ 1026 (1054)
..+..+.+.+|..++..++.+++++++++++ +||+.| | ++||+.+|.+||| |+. ..++..++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-iGDs~n-D-i~m~~~ag~~va~-na~--~~lk~~Ad------------ 194 (210)
T d1j97a_ 133 VEGEVLKENAKGEILEKIAKIEGINLEDTVA-VGDGAN-D-ISMFKKAGLKIAF-CAK--PILKEKAD------------ 194 (210)
T ss_dssp EECSSCSTTHHHHHHHHHHHHHTCCGGGEEE-EESSGG-G-HHHHHHCSEEEEE-SCC--HHHHTTCS------------
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE-ECCCCC-H-HHHHHHCCCCEEE-CCC--HHHHHHCC------------
T ss_conf 3321111234541033578884666554178-637847-4-9999988987899-989--99997499------------
Q ss_pred CCEEEECCCCCHHHHHHHHH
Q ss_conf 86599426469789999998
Q 001557 1027 HNVIQVDEACDSYDIRASLE 1046 (1054)
Q Consensus 1027 ~~~~~~t~~~~~~gI~~aL~ 1046 (1054)
++++..+.+||.++||
T Consensus 195 ----~vi~~~d~~~vl~~lk 210 (210)
T d1j97a_ 195 ----ICIEKRDLREILKYIK 210 (210)
T ss_dssp ----EEECSSCGGGGGGGCC
T ss_pred ----EEECCCCHHHHHHHHC
T ss_conf ----9991799999999869
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.95 E-value=1.5e-07 Score=65.15 Aligned_cols=222 Identities=13% Similarity=0.073 Sum_probs=133.1
Q ss_pred HHHHHCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC-CCCC-----
Q ss_conf 9964302798995698899999954069984789999996822644578889968994999868874458-9998-----
Q 001557 371 EELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRH-NGDV----- 444 (1054)
Q Consensus 371 E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~r~~~gv~~~g~~~~kv~vIPnGID~~~f~p~-~~~~----- 444 (1054)
-.+++..+..|-.+|.-..+-..... +.+. +.....++.-|-|||....+... .+..
T Consensus 431 a~Lal~~S~~vNGVSklH~ev~~~~~--~~~~---------------~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~ 493 (824)
T d2gj4a1 431 AHLCIAGSHAVNGVARIHSEILKKTI--FKDF---------------YELEPHKFQNKTNGITPRRWLVLCNPGLAEIIA 493 (824)
T ss_dssp HHHHHHTCSCEEESSHHHHHHHHHTT--THHH---------------HHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHH
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHH--CCCC---------------CCCCCCCEECCCCCCCCCCCHHCCCHHHHHHHH
T ss_conf 99999864267889999999999764--3565---------------667872402664751576113116977999877
Q ss_pred ----------CCCCCCCCCCCCCCCCCHHHH---------------HH---HHCCCCCCCEEEEEECCCCCCCHHHHH--
Q ss_conf ----------874433679999999831577---------------74---211899986899992899878999999--
Q 001557 445 ----------DGEVERDEGSPASPDPPIWSE---------------IM---HFFSNPRKPMILALARPDPKKNITTLV-- 494 (1054)
Q Consensus 445 ----------~~~~~~~~~~~~~~~~~~~~~---------------~~---~~~~~~~~~~IL~vgRld~~Kgi~~li-- 494 (1054)
...+...... ..++..+.. +. ....+|+...++++-|+...|...+.+
T Consensus 494 ~~ig~~w~~d~~~l~~l~~~--~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~ 571 (824)
T d2gj4a1 494 ERIGEEYISDLDQLRKLLSY--VDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLH 571 (824)
T ss_dssp HHHCSGGGGCGGGGGGGGGG--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHH
T ss_pred HHHCCCCCCCHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECHHHHHHHHHHHH
T ss_conf 54344322598999998873--8989999999999998289999999998387789641101310000233334566765
Q ss_pred --HHHHHCCCC--CCCCCEEEEEECCCCCHHHHHCHHHHHHHHHHHHHHCCCCC------CEEECCCCCCCCHHHHHHHH
Q ss_conf --999844023--69983999993399920220102999999999998819999------78839999989499999982
Q 001557 495 --KAFGECRPL--RELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG------QVAYPKHHKQSDVPDIYRLA 564 (1054)
Q Consensus 495 --~A~~~l~~~--~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~li~~~~l~~------~V~~~g~~~~~el~~ly~~A 564 (1054)
.-+.++... .+...+++|.|+....... ...+++..|+...+..+..+ +|.|+...+-+--..++..|
T Consensus 572 i~~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~--~gK~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~ 649 (824)
T d2gj4a1 572 VITLYNRIKKEPNKFVVPRTVMIGGKAAPGYH--MAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAA 649 (824)
T ss_dssp HHHHHHHHHHCTTSCCCCEEEEEECCCCTTCH--HHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGC
T ss_pred HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCH--HHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 89999876534567888749998078897638--8999999999999987418112153448870787669999751143
Q ss_pred HCCCCEEEECCC--CCCCCHHHHHHHHCCCCEEECCCCCCCCCEEE--CCCEEEECC
Q ss_conf 139929996399--89986899999984987999066674220120--774599199
Q 001557 565 AKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDNGLLVDP 617 (1054)
Q Consensus 565 a~~~Dv~i~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eii~~--~~~Gllv~p 617 (1054)
||.++.|+ .|..|..-+-+|..|.+.+++..|...|+.+. +.||+.|-.
T Consensus 650 ----Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~ 702 (824)
T d2gj4a1 650 ----DLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGM 702 (824)
T ss_dssp ----SEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSC
T ss_pred ----HHHHCCCCCCCCCCCCCHHHHHHCCCEEECCCCCHHHHHHHHCCCCCEEEECC
T ss_conf ----44131899973457750458997598356356635899998647566798179
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=98.88 E-value=3.1e-06 Score=56.20 Aligned_cols=82 Identities=17% Similarity=0.150 Sum_probs=55.9
Q ss_pred CCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCC----C-CEEECCCEEEECC-
Q ss_conf 978839999989499999982139929996399899868999999849879990666742----2-0120774599199-
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----D-IHRVLDNGLLVDP- 617 (1054)
Q Consensus 544 ~~V~~~g~~~~~el~~ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----e-ii~~~~~Gllv~p- 617 (1054)
+++.+..+.++.++. .+..+ ++||. -|-..++.||+++|+|+|+....+=. . +++..+.|+.++.
T Consensus 330 ~n~~v~~~~pq~~~l-~~p~~----~~fIt----HGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~ 400 (461)
T d2acva1 330 GKGMICGWAPQVEVL-AHKAI----GGFVS----HCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVD 400 (461)
T ss_dssp CSEEEESSCCHHHHH-HSTTE----EEEEE----CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSS
T ss_pred CCEEEEECCCHHHHH-HCCCC----CEEEE----CCCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCEEEEECC
T ss_conf 873898518778888-55657----77983----3884489999985999896776000288999999984936784153
Q ss_pred -------CCHHHHHHHHHHHHHCH
Q ss_conf -------99999999999998199
Q 001557 618 -------HDQQSIADALLKLVSDK 634 (1054)
Q Consensus 618 -------~d~~~la~aI~~ll~d~ 634 (1054)
-+.++++++|.++|+++
T Consensus 401 ~~~~~~~~t~~~l~~a~~~vl~~d 424 (461)
T d2acva1 401 YRKGSDVVAAEEIEKGLKDLMDKD 424 (461)
T ss_dssp CCTTCCCCCHHHHHHHHHHHTCTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 113678547999999999996088
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.86 E-value=2.4e-06 Score=57.03 Aligned_cols=357 Identities=13% Similarity=0.134 Sum_probs=186.2
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE-ECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 64299998304444567767899898870768999999998159994079998-25767999897668763113444310
Q 001557 164 KKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLL-TRQVSAPDVDWTYAEPSEMLNRKNTE 242 (1054)
Q Consensus 164 ~~mkIllis~h~~~r~~~~elgr~~dtGG~~~~v~eLa~aLa~~~Gv~~V~vi-t~~~~~p~~~~~~~~~~e~l~~~~~~ 242 (1054)
+||||++|+- - | ..---+.-|.++|.+.++ .++.++ |.++. ++..
T Consensus 1 ~k~Ki~~v~G--t-R-------------~e~~kl~pli~~l~~~~~-~~~~li~tG~H~------------~~~~----- 46 (377)
T d1o6ca_ 1 KKLKVMTVFG--T-R-------------PEAIKMAPLVLELKKYPE-IDSYVTVTAQHR------------QMLD----- 46 (377)
T ss_dssp CCEEEEEEEC--S-H-------------HHHHHHHHHHHHGGGCTT-EEEEEEECCSCG------------GGTH-----
T ss_pred CCCEEEEEEE--C-H-------------HHHHHHHHHHHHHHHCCC-CCEEEEEECCCH------------HHHH-----
T ss_conf 9846999997--0-5-------------859999999999971899-987999937988------------9999-----
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC-CCHHHH
Q ss_conf 0001368889919998148998755332457997478999999999999999864315999996429997589-704999
Q 001557 243 NLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA-DAGDAA 321 (1054)
Q Consensus 243 ~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~~~L~~~~~~~~~~~pDIIh~h~~-~~g~~a 321 (1054)
.+.++..-.+. +.+...... ..+... .-..+..+.+.+.+ .+||+|..+.- ...+++
T Consensus 47 ~~~~~~~i~~~---~~~~~~~~~---------~~~~~~---~~~~i~~~~~~~~~-------~kpD~v~v~GDr~e~la~ 104 (377)
T d1o6ca_ 47 QVLDAFHIKPD---FDLNIMKER---------QTLAEI---TSNALVRLDELFKD-------IKPDIVLVHGDTTTTFAG 104 (377)
T ss_dssp HHHHHTTCCCS---EECCCCCTT---------CCHHHH---HHHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHH
T ss_pred HHHHHCCCCCC---EEEECCCCC---------CCHHHH---HHHHHHHHHHHHHH-------CCCCEEEEEECCCCCCHH
T ss_conf 99851687775---354438899---------889999---99999850566653-------366536764034543015
Q ss_pred HHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCH
Q ss_conf 99972599989999279832048999871778756465576799999999964302798995698899999954069984
Q 001557 322 ALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401 (1054)
Q Consensus 322 ~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~rri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~ 401 (1054)
+..+...++|+++---+.-.. ......... ..|.. .-+.|+..+|+|+...+.+.+. +..+
T Consensus 105 a~aa~~~~Ipi~HiegG~~s~---------~~~~~~~de---~~R~~-----iskls~~hf~~t~~~~~~L~~~--G~~~ 165 (377)
T d1o6ca_ 105 SLAAFYHQIAVGHVEAGLRTG---------NKYSPFPEE---LNRQM-----TGAIADLHFAPTGQAKDNLLKE--NKKA 165 (377)
T ss_dssp HHHHHHTTCEEEEESCCCCCS---------CTTTTTTHH---HHHHH-----HHHHCSEEEESSHHHHHHHHHT--TCCG
T ss_pred HHHHHHCCCEEEEEECCCCCC---------CCCCCCCHH---HHCCC-----CCCCEEEEEECCHHHHHHHHHH--CCCC
T ss_conf 666531142279995145654---------332347145---54003-----5653048863234666344330--3445
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCEEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEE
Q ss_conf 789999996822644578889968994999-8688744589998874433679999999831577742118999868999
Q 001557 402 VLERKLRARIKRGVSCHGRFMPRMVVIPPG-IEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILA 480 (1054)
Q Consensus 402 ~~~~~l~~r~~~gv~~~g~~~~kv~vIPnG-ID~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IL~ 480 (1054)
.++.++.+. +|.-........ ... . ......+..+++.
T Consensus 166 ---------------------~~I~~vG~~~~D~i~~~~~~~~---------------~~~----~-~~~~~~~~~ilvt 204 (377)
T d1o6ca_ 166 ---------------------DSIFVTGNTAIDALNTTVRDGY---------------SHP----V-LDQVGEDKMILLT 204 (377)
T ss_dssp ---------------------GGEEECCCHHHHHHHHHCCSSC---------------CCS----T-TTTTTTSEEEEEC
T ss_pred ---------------------CEEEECCCHHHHHHHHHHHHHH---------------HHH----H-HHHCCCCCEEEEE
T ss_conf ---------------------4275234206788887777777---------------533----3-4430578449998
Q ss_pred EECCCCC-CCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCHHHHHHHHHH-HHHHCCCCCCEEECCCCCCCCHH
Q ss_conf 9289987-899999999984402369983999993399920220102999999999-99881999978839999989499
Q 001557 481 LARPDPK-KNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILK-LIDKYDLYGQVAYPKHHKQSDVP 558 (1054)
Q Consensus 481 vgRld~~-Kgi~~li~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~-li~~~~l~~~V~~~g~~~~~el~ 558 (1054)
+-|..-. +.....+.++..+.. ....+.++....+. ..+.. ....+...+++.+...++..+..
T Consensus 205 ~Hr~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~------------~~~~~~~~~~~~~~~ni~~~~~l~~~~fl 270 (377)
T d1o6ca_ 205 AHRRENLGEPMENMFKAIRRIVG--EFEDVQVVYPVHLN------------PVVREAAHKHFGDSDRVHLIEPLEVIDFH 270 (377)
T ss_dssp C----------HHHHHHHHHHHH--HCTTEEEEEC----------------CHHHHHHHHC--CCSSEEECCCCCHHHHH
T ss_pred ECCCCCCCCCHHHHHHHHHHHCC--CCCCCCCCCCCCCC------------CCCCHHHHHCCCCCCCEEECCCCCHHHHH
T ss_conf 32310146633789999875212--33556532345521------------13211221013456514751321368899
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCC-CCCCCCEEECCCEEEECCCCHHHHHHHHHHHHHCHHHH
Q ss_conf 99998213992999639989986899999984987999066-67422012077459919999999999999998199999
Q 001557 559 DIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLW 637 (1054)
Q Consensus 559 ~ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAmA~G~PVIat~~-Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~ 637 (1054)
.+++.| ++++- ..|-.+.||...|+|+|.-.. +.-++.++.+ +-+++++ |.+++.+++.+++.++..+
T Consensus 271 ~llk~s----~~vIg-----nSss~i~Ea~~lg~P~Inir~~tERqe~~~~g-~nilv~~-~~~~I~~~i~~~l~~~~~~ 339 (377)
T d1o6ca_ 271 NFAAKS----HFILT-----DSGGVQEEAPSLGKPVLVLRDTTERPEGVEAG-TLKLAGT-DEENIYQLAKQLLTDPDEY 339 (377)
T ss_dssp HHHHHC----SEEEE-----C--CHHHHGGGGTCCEEEECSCCC---CTTTT-SSEEECS-CHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHH----HEEEC-----CCCHHHHHHHHHHCEEEEECCCCCCCCHHHCC-EEEECCC-CHHHHHHHHHHHHHCHHHH
T ss_conf 998642----25641-----64046776666541489807887582200068-0598789-9999999999997496877
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 9999999999860997999999999999
Q 001557 638 ERCRQNGLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 638 ~~~~~~a~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
..+.+ ....|.-...+++..+.+.
T Consensus 340 ~~~~~----~~npYGdG~as~rI~~~L~ 363 (377)
T d1o6ca_ 340 KKMSQ----ASNPYGDGEASRRIVEELL 363 (377)
T ss_dssp HHHHH----CCCTTCCSCHHHHHHHHHH
T ss_pred HHHCC----CCCCCCCCHHHHHHHHHHH
T ss_conf 63065----8898989829999999999
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=98.85 E-value=1.3e-06 Score=58.86 Aligned_cols=94 Identities=11% Similarity=0.135 Sum_probs=66.5
Q ss_pred CCCEEECCCCCCCCHHHHH--HHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCC----CCCE-EECCCEEEE
Q ss_conf 9978839999989499999--98213992999639989986899999984987999066674----2201-207745991
Q 001557 543 YGQVAYPKHHKQSDVPDIY--RLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP----VDIH-RVLDNGLLV 615 (1054)
Q Consensus 543 ~~~V~~~g~~~~~el~~ly--~~Aa~~~Dv~i~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~----~eii-~~~~~Gllv 615 (1054)
..+|.+..++|+. +++ ..+ ++||. -|-..++.||+.+|+|+|+....+= ...+ +..+.|+.+
T Consensus 345 ~~Nv~~~~~~Pq~---~lL~hp~~----~~fIt----HGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l 413 (473)
T d2pq6a1 345 ADRGLIASWCPQD---KVLNHPSI----GGFLT----HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI 413 (473)
T ss_dssp TTTEEEESCCCHH---HHHTSTTE----EEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCCEEEEEECCHH---HHHCCCCC----CEEEE----CCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCEEEEE
T ss_conf 4766886308879---99647767----59995----6884089999985999896564112188999999971737861
Q ss_pred CCC-CHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 999-999999999999819999999999999998
Q 001557 616 DPH-DQQSIADALLKLVSDKQLWERCRQNGLKNI 648 (1054)
Q Consensus 616 ~p~-d~~~la~aI~~ll~d~~~~~~~~~~a~~~v 648 (1054)
+.. +.++++++|.+++.|+. ..++++++.+..
T Consensus 414 ~~~~t~~~l~~ai~~vl~d~~-~~~~r~~a~~l~ 446 (473)
T d2pq6a1 414 DTNVKREELAKLINEVIAGDK-GKKMKQKAMELK 446 (473)
T ss_dssp CSSCCHHHHHHHHHHHHTSHH-HHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHCCCH-HHHHHHHHHHHH
T ss_conf 897389999999999976976-899999999999
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.80 E-value=5.1e-07 Score=61.51 Aligned_cols=283 Identities=11% Similarity=0.026 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEECCC-CCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 999999999864315999996429997589-7049999997259998999927983204899987177875646557679
Q 001557 286 THIIQISKVLGEQVGSGQPIWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKI 364 (1054)
Q Consensus 286 ~~i~~~~~~L~~~~~~~~~~~pDIIh~h~~-~~g~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~ 364 (1054)
..+..+.+.+.+ .+||+|..+.- ...++++..+...++|+++.--+.-. |....... -..
T Consensus 75 ~~~~~~~~~l~~-------~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~rs---------g~~~~~~~---de~ 135 (373)
T d1v4va_ 75 RILPQAARALKE-------MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS---------GNLKEPFP---EEA 135 (373)
T ss_dssp HHHHHHHHHHHH-------TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC---------SCTTSSTT---HHH
T ss_pred HHHHHHHHHHHH-------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCC---------CCCCCCCC---HHH
T ss_conf 999987666640-------37640011136753103778898762122241343455---------43356761---666
Q ss_pred HHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC-CCCCCCCCCCCC
Q ss_conf 9999999964302798995698899999954069984789999996822644578889968994999-868874458999
Q 001557 365 MRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPG-IEFHHIVRHNGD 443 (1054)
Q Consensus 365 ~rri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~r~~~gv~~~g~~~~kv~vIPnG-ID~~~f~p~~~~ 443 (1054)
.|.+ .-+.|+..+|+|+...+.+.+. +..+. ++.++.+. +|.-......
T Consensus 136 ~R~~-----iskls~~hf~~t~~~~~~L~~~--Ge~~~---------------------~I~~vG~p~~D~i~~~~~~-- 185 (373)
T d1v4va_ 136 NRRL-----TDVLTDLDFAPTPLAKANLLKE--GKREE---------------------GILVTGQTGVDAVLLAAKL-- 185 (373)
T ss_dssp HHHH-----HHHHCSEEEESSHHHHHHHHTT--TCCGG---------------------GEEECCCHHHHHHHHHHHH--
T ss_pred HHHH-----HCCCCCEEEECCHHHHHHHHHH--CCCCC---------------------CEEECCCCHHHHHHHHHHH--
T ss_conf 6655-----2234432551221566666663--04542---------------------1344266215577765431--
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHH
Q ss_conf 88744336799999998315777421189998689999289987899999999984402369983999993399920220
Q 001557 444 VDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMS 523 (1054)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IL~vgRld~~Kgi~~li~A~~~l~~~~~~~~l~LIiG~~~~~~~~~ 523 (1054)
.........+...++.+-|....++...+.+++..+........+.+.....+ .
T Consensus 186 ---------------------~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~---~-- 239 (373)
T d1v4va_ 186 ---------------------GRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP---V-- 239 (373)
T ss_dssp ---------------------CCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH---H--
T ss_pred ---------------------CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC---C--
T ss_conf ---------------------10002234455316884265553127899999999865335650356403422---2--
Q ss_pred HCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCC-CCC
Q ss_conf 1029999999999988199997883999998949999998213992999639989986899999984987999066-674
Q 001557 524 GTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GGP 602 (1054)
Q Consensus 524 ~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~~ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAmA~G~PVIat~~-Gg~ 602 (1054)
... ...+......++.+...++..+...+++.| .+++ + ..+..+.||..+|+|+|.-.+ |.-
T Consensus 240 -----~~~---~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s----~~vi-g----nSssgi~Ea~~lg~P~Inir~~~eR 302 (373)
T d1v4va_ 240 -----VRE---AVFPVLKGVRNFVLLDPLEYGSMAALMRAS----LLLV-T----DSGGLQEEGAALGVPVVVLRNVTER 302 (373)
T ss_dssp -----HHH---HHHHHHTTCTTEEEECCCCHHHHHHHHHTE----EEEE-E----SCHHHHHHHHHTTCCEEECSSSCSC
T ss_pred -----CHH---HHHHHHCCCCCCEEECCCHHHHHHHHHHHC----EEEE-C----CCCHHHHCCHHHCCCEEEECCCCCC
T ss_conf -----103---555543033320011100078888876430----1685-0----6412222003205868984887669
Q ss_pred CCCEEECCCEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHH
Q ss_conf 2201207745991999999999999999819999999999999998-6099799999999999980
Q 001557 603 VDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 603 ~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~a~~~v-~~fsw~~~a~~yl~~l~~l 667 (1054)
++-++.+ +-+++. .|.+++..+|..++.++..+.++.. . ..|.=-..+++..+.+..-
T Consensus 303 qeg~~~g-~nvlv~-~d~~~I~~~i~~~l~~~~~~~~~~~-----~~npYGdG~as~rI~~~L~~~ 361 (373)
T d1v4va_ 303 PEGLKAG-ILKLAG-TDPEGVYRVVKGLLENPEELSRMRK-----AKNPYGDGKAGLMVARGVAWR 361 (373)
T ss_dssp HHHHHHT-SEEECC-SCHHHHHHHHHHHHTCHHHHHHHHH-----SCCSSCCSCHHHHHHHHHHHH
T ss_pred HHHHHCC-EEEECC-CCHHHHHHHHHHHHCCHHHHHHCCC-----CCCCCCCCHHHHHHHHHHHHH
T ss_conf 8789629-049758-9999999999999719898864024-----889898987999999999998
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=98.68 E-value=6.1e-07 Score=60.99 Aligned_cols=64 Identities=13% Similarity=0.019 Sum_probs=48.8
Q ss_pred CEEEEEEECCCC--CHHHHHHHHHHHHHHHCCCCCCCEEEEEEC---CCCHHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf 789999851899--902599999999997215899965899986---899898999999279999988679983
Q 001557 769 KYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLST---ALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 769 ~kliv~DiDGTL--~~~~~~~~~~aL~~l~~~~~~~gi~fvIaT---GR~~~~l~~~l~~~~l~~~~~D~lI~~ 837 (1054)
.|.|+||+|||| ...+.+.+.++|+.+++. |+.|+++| +|+..++.+.+..+|++.+ .+-++++
T Consensus 3 ik~VifDlDGTL~~~~~~i~~a~e~i~~l~~~----g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~-~~~i~~~ 71 (250)
T d2c4na1 3 IKNVICDIDGVLMHDNVAVPGAAEFLHGIMDK----GLPLVLLTNYPSQTGQDLANRFATAGVDVP-DSVFYTS 71 (250)
T ss_dssp CCEEEEECBTTTEETTEECTTHHHHHHHHHHT----TCCEEEEESCCSCCHHHHHHHHHHTTCCCC-GGGEEEH
T ss_pred CCEEEEECCCEEEECCCCCCCHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHCCCCCC-CEEEECH
T ss_conf 87999979980187998582099999999977----995899928999999999888763035665-4167304
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.62 E-value=4.9e-08 Score=68.37 Aligned_cols=51 Identities=16% Similarity=0.178 Sum_probs=38.4
Q ss_pred CCCCCHHHH--HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCE-EEEECCCC
Q ss_conf 299998999--999999949984678999676788661222367540-89966831
Q 001557 952 PVLASRSQA--LRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKGVG 1004 (1054)
Q Consensus 952 P~~asKg~A--L~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~-gVaMgNa~ 1004 (1054)
+...+|..+ ..++++++|++++++++ +||+-+|| +.|...+|. +|.|..+.
T Consensus 175 ~~~~~KP~~~~~~~~~~~~gi~~~~~l~-IGD~~~~D-I~~a~~aG~~si~V~~G~ 228 (253)
T d1yv9a1 175 PVYIGKPKAIIMERAIAHLGVEKEQVIM-VGDNYETD-IQSGIQNGIDSLLVTSGF 228 (253)
T ss_dssp CEECSTTSHHHHHHHHHHHCSCGGGEEE-EESCTTTH-HHHHHHHTCEEEEETTSS
T ss_pred EEEECCCCHHHHHHHHHHHCCCCCCEEE-ECCCHHHH-HHHHHHCCCCEEEECCCC
T ss_conf 3651343126787899984888442378-43782779-999998799899989899
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.60 E-value=2.1e-05 Score=50.67 Aligned_cols=95 Identities=14% Similarity=0.091 Sum_probs=62.9
Q ss_pred CCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCC----CCCE-EECCCEEEEC
Q ss_conf 9997883999998949999998213992999639989986899999984987999066674----2201-2077459919
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP----VDIH-RVLDNGLLVD 616 (1054)
Q Consensus 542 l~~~V~~~g~~~~~el~~ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~----~eii-~~~~~Gllv~ 616 (1054)
..++|.+.+++|+.++... ..+ ++||. =|-..++.||+.+|+|+|+....+= ...+ +..+.|+.+.
T Consensus 332 ~~~nv~~~~w~Pq~~lL~h-p~~----~~fVt----HGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~ 402 (471)
T d2vcha1 332 KKRGFVIPFWAPQAQVLAH-PST----GGFLT----HCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPR 402 (471)
T ss_dssp TTTEEEEESCCCHHHHHHS-TTE----EEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCC
T ss_pred CCCCEEECCCCCHHHHHCC-CCC----CEEEE----CCCCCHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHEEEEEEE
T ss_conf 6787552165789998657-657----88970----68842899999859998971440122889999999720489972
Q ss_pred C-----CCHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 9-----99999999999998199999999999999
Q 001557 617 P-----HDQQSIADALLKLVSDKQLWERCRQNGLK 646 (1054)
Q Consensus 617 p-----~d~~~la~aI~~ll~d~~~~~~~~~~a~~ 646 (1054)
. -+.+++++||.+++++++ -..+++++.+
T Consensus 403 ~~~~~~~t~~~l~~ai~~vl~~~~-~~~~r~ra~~ 436 (471)
T d2vcha1 403 AGDDGLVRREEVARVVKGLMEGEE-GKGVRNKMKE 436 (471)
T ss_dssp CCTTSCCCHHHHHHHHHHHHTSTH-HHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCH-HHHHHHHHHH
T ss_conf 487886979999999999967947-8999999999
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=98.59 E-value=4.3e-06 Score=55.25 Aligned_cols=93 Identities=18% Similarity=0.218 Sum_probs=63.0
Q ss_pred CCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCC----CEE-ECCCEEEECCC
Q ss_conf 9788399999894999999821399299963998998689999998498799906667422----012-07745991999
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD----IHR-VLDNGLLVDPH 618 (1054)
Q Consensus 544 ~~V~~~g~~~~~el~~ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e----ii~-~~~~Gllv~p~ 618 (1054)
.++.+..++|+.++.. ...+ ++||. -|-..++.||+.+|+|+|+....+=.. .+. ..+.|+.++..
T Consensus 319 ~nv~~~~~~pq~~lL~-hp~~----~~fIt----HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~ 389 (450)
T d2c1xa1 319 GYGMVVPWAPQAEVLA-HEAV----GAFVT----HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGG 389 (450)
T ss_dssp TTEEEESCCCHHHHHT-STTE----EEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGG
T ss_pred CCCCCCCCCCHHHHHC-CCCE----EEEEC----CCCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCEEEECCC
T ss_conf 5401554678376652-6741----69970----6883079999985999896354000089999999970908980389
Q ss_pred --CHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf --9999999999998199999999999999
Q 001557 619 --DQQSIADALLKLVSDKQLWERCRQNGLK 646 (1054)
Q Consensus 619 --d~~~la~aI~~ll~d~~~~~~~~~~a~~ 646 (1054)
+.+++.+||.++|+++. .++.++++.+
T Consensus 390 ~~t~~~l~~ai~~vL~d~~-y~~~~~r~~~ 418 (450)
T d2c1xa1 390 VFTKSGLMSCFDQILSQEK-GKKLRENLRA 418 (450)
T ss_dssp SCCHHHHHHHHHHHHHSHH-HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCH-HHHHHHHHHH
T ss_conf 8389999999999961947-9999999999
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.56 E-value=3e-07 Score=63.05 Aligned_cols=199 Identities=11% Similarity=0.060 Sum_probs=100.2
Q ss_pred CCCEEEEEEECCCC--CHHHHHHHHHHHHHHHCCCCCCCEEEEEEC---CCCHHHHHHHHHHCCCCCCCCCEEEECCCCE
Q ss_conf 77789999851899--902599999999997215899965899986---8998989999992799999886799838947
Q 001557 767 RRKYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLST---ALTILELHSLLVSGGLSPLAFDAFICNSGSE 841 (1054)
Q Consensus 767 ~~~kliv~DiDGTL--~~~~~~~~~~aL~~l~~~~~~~gi~fvIaT---GR~~~~l~~~l~~~~l~~~~~D~lI~~nGs~ 841 (1054)
...++++||+|||| .....+...++|+.+++. |+.|+++| +|+...+...+..+|++. .++-++++....
T Consensus 5 ~~ik~vlFDlDGTL~~~~~~i~~a~e~l~~l~~~----g~~~~~~TN~~~~~~~~~~~~~~~~g~~~-~~~~v~ts~~~~ 79 (261)
T d1vjra_ 5 DKIELFILDMDGTFYLDDSLLPGSLEFLETLKEK----NKRFVFFTNNSSLGAQDYVRKLRNMGVDV-PDDAVVTSGEIT 79 (261)
T ss_dssp GGCCEEEECCBTTTEETTEECTTHHHHHHHHHHT----TCEEEEEESCTTSCHHHHHHHHHHTTCCC-CGGGEEEHHHHH
T ss_pred HHCCEEEEECCCEEEECCCCCCHHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHHCCCC-CCCEECCHHHHH
T ss_conf 7499999959885687991683199999999976----99889995899999899999998523566-501034589999
Q ss_pred EECCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
Q ss_conf 97279998888998620074300000345684669999998631025777866752123565575128999963999995
Q 001557 842 LYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIP 921 (1054)
Q Consensus 842 I~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~kis~~~~~~~~~~ 921 (1054)
..+- .+..+...+. ......+...+..+.....+. .. . ............
T Consensus 80 ~~~~-------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------~~-~--~~~~~~~~~~~~ 129 (261)
T d1vjra_ 80 AEHM-------------LKRFGRCRIF-LLGTPQLKKVFEAYGHVIDEE-------------NP-D--FVVLGFDKTLTY 129 (261)
T ss_dssp HHHH-------------HHHHCSCEEE-EESCHHHHHHHHHTTCEECSS-------------SC-S--EEEECCCTTCCH
T ss_pred HHHH-------------HHHCCCCEEE-EECCCCHHHHHHHCCCCCCHH-------------HC-C--EEEECCCCCCCH
T ss_conf 9999-------------9863796389-835643057888619502501-------------01-2--057457765346
Q ss_pred CHHHHHHHHHHHCCEEEEEEEECCEEE------------------------EEECCCCCHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 189999999974490999996288379------------------------97129999899999999994998467899
Q 001557 922 PVKELRKLMRIQALRCHVIYCQNGTKL------------------------HVIPVLASRSQALRYLHVRWGIDLSNVVV 977 (1054)
Q Consensus 922 ~v~el~~~L~~~~~~~~vi~s~~~~~l------------------------EV~P~~asKg~AL~~L~~~~gi~~~~via 977 (1054)
......-.+...+ ..++........ +....+=........+++++|+++++++.
T Consensus 130 ~~~~~~~~~~~~~--~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~lm 207 (261)
T d1vjra_ 130 ERLKKACILLRKG--KFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAM 207 (261)
T ss_dssp HHHHHHHHHHTTT--CEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEEE
T ss_pred HHHHHHHHHHHCC--CCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCE
T ss_conf 8899998875037--40122467754557887141452066777653132121366799578888887664047221103
Q ss_pred EECCCCCCCCCCCCCCCCE-EEEECCCC
Q ss_conf 9676788661222367540-89966831
Q 001557 978 IAGECGDTDYEGLLGGVHK-TVILKGVG 1004 (1054)
Q Consensus 978 f~GD~~d~D~~eML~~~g~-gVaMgNa~ 1004 (1054)
+||+-+|| +.|-+.+|. +|.|..+.
T Consensus 208 -VGD~~~~D-I~ga~~aG~~si~V~~G~ 233 (261)
T d1vjra_ 208 -VGDRLYTD-VKLGKNAGIVSILVLTGE 233 (261)
T ss_dssp -EESCHHHH-HHHHHHHTCEEEEESSSS
T ss_pred -ECCCHHHH-HHHHHHCCCCEEEECCCC
T ss_conf -16871678-999998799699989899
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.46 E-value=1.9e-07 Score=64.40 Aligned_cols=80 Identities=10% Similarity=-0.017 Sum_probs=66.0
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 97129999899999999994998467899967678866122236754089966831357854101587766654468986
Q 001557 949 HVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHN 1028 (1054)
Q Consensus 949 EV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~ 1028 (1054)
++.+...+|..+++.+++++++++++++. +||+.| | ++||+.++.++||+||. .+++..++
T Consensus 73 ~~~~~~~~K~~~l~~~~~~~~i~~~~v~~-vGDd~n-D-l~~l~~~g~siap~nA~--~~vk~~A~-------------- 133 (177)
T d1k1ea_ 73 LFFLGKLEKETACFDLMKQAGVTAEQTAY-IGDDSV-D-LPAFAACGTSFAVADAP--IYVKNAVD-------------- 133 (177)
T ss_dssp EEEESCSCHHHHHHHHHHHHTCCGGGEEE-EECSGG-G-HHHHHHSSEEEECTTSC--HHHHTTSS--------------
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCEEEE-ECCCCC-H-HHHHHHCCEEEECCCCC--HHHHHHCC--------------
T ss_conf 01101363888999999986677522577-058840-7-89996689289848864--99998589--------------
Q ss_pred EEEECCCCCHHH-HHHHHHHHC
Q ss_conf 599426469789-999998715
Q 001557 1029 VIQVDEACDSYD-IRASLEKLG 1049 (1054)
Q Consensus 1029 ~~~~t~~~~~~g-I~~aL~~~~ 1049 (1054)
|||....-+| |++..+++=
T Consensus 134 --~Vt~~~GG~GavrE~~e~il 153 (177)
T d1k1ea_ 134 --HVLSTHGGKGAFREMSDMIL 153 (177)
T ss_dssp --EECSSCTTTTHHHHHHHHHH
T ss_pred --EEECCCCCCCHHHHHHHHHH
T ss_conf --99178899763999999999
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=98.30 E-value=2.8e-06 Score=56.55 Aligned_cols=197 Identities=14% Similarity=0.114 Sum_probs=98.0
Q ss_pred CEEEEEEECCCC--CHHHHHHHHHHHHHHHCCCCCCCEEEEEEC---CCCHHHHHHHHHH-CCCCCCCCCEEEECCCCEE
Q ss_conf 789999851899--902599999999997215899965899986---8998989999992-7999998867998389479
Q 001557 769 KYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLST---ALTILELHSLLVS-GGLSPLAFDAFICNSGSEL 842 (1054)
Q Consensus 769 ~kliv~DiDGTL--~~~~~~~~~~aL~~l~~~~~~~gi~fvIaT---GR~~~~l~~~l~~-~~l~~~~~D~lI~~nGs~I 842 (1054)
.|.|+||+|||| ...+.+...++++++++. |+.|+++| .|+...+.+.+.. .++.. ..+-++++..+..
T Consensus 2 yk~vlFDlDGTL~~~~~~i~~a~e~l~~l~~~----g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~-~~~~i~~~~~~~~ 76 (253)
T d1wvia_ 2 YKGYLIDLDGTIYKGKDRIPAGEDFVKRLQER----QLPYILVTNNTTRTPEMVQEMLATSFNIKT-PLETIYTATLATI 76 (253)
T ss_dssp CCEEEEECBTTTEETTEECHHHHHHHHHHHHH----TCCEEEEECCCSSCHHHHHHHHHHHHSCCC-CGGGEEEHHHHHH
T ss_pred CCEEEECCCCCEEECCCCCCCHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHHCCCCC-CCCCCCCHHHHHH
T ss_conf 69999928682088998381499999999977----997899948998999999999986067654-4333466799999
Q ss_pred ECCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
Q ss_conf 72799988889986200743000003456846699999986310257778667521235655751289999639999951
Q 001557 843 YYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPP 922 (1054)
Q Consensus 843 ~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~kis~~~~~~~~~~~ 922 (1054)
.+-. ... ..+ ..+......+...+......... .......... ... ...
T Consensus 77 ~~l~---------~~~--~~~---~~~~~~~~~l~~~~~~~~~~~~~---------------~~~~~~~~~~-~~~-~~~ 125 (253)
T d1wvia_ 77 DYMN---------DMK--RGK---TAYVIGETGLKKAVAEAGYREDS---------------ENPAYVVVGL-DTN-LTY 125 (253)
T ss_dssp HHHH---------HHC--CCS---EEEEESCHHHHHHHHHTTCEECS---------------SSCSEEEECC-CTT-CBH
T ss_pred HHHH---------HHC--CCC---EEEECCCHHHHHHHHHCCCCCCC---------------CCCCEEEEEC-CCC-CCH
T ss_conf 9998---------704--585---13432666789999972975333---------------4430489854-787-678
Q ss_pred HHHHHHHHHHHCCEEEEEEEECCEEE---------------------EEECCCCCH--HHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 89999999974490999996288379---------------------971299998--9999999999499846789996
Q 001557 923 VKELRKLMRIQALRCHVIYCQNGTKL---------------------HVIPVLASR--SQALRYLHVRWGIDLSNVVVIA 979 (1054)
Q Consensus 923 v~el~~~L~~~~~~~~vi~s~~~~~l---------------------EV~P~~asK--g~AL~~L~~~~gi~~~~viaf~ 979 (1054)
...+...+..... ..++.+++...+ ...+...+| ...+.+.++++|++++++++ +
T Consensus 126 ~~~~~~~~~~~~~-~~~i~tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~~~~~~m-I 203 (253)
T d1wvia_ 126 EKLTLATLAIQKG-AVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIM-V 203 (253)
T ss_dssp HHHHHHHHHHHTT-CEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTSCGGGEEE-E
T ss_pred HHHHHHHHHHHHC-CCCCCCCCCCEEECCCCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCEEHHHHCCCCCCCEEE-E
T ss_conf 8887776666522-5511679996347688630467732101233333304784167742001100110345451699-8
Q ss_pred CCCCCCCCCCCCCCCCE-EEEECCCC
Q ss_conf 76788661222367540-89966831
Q 001557 980 GECGDTDYEGLLGGVHK-TVILKGVG 1004 (1054)
Q Consensus 980 GD~~d~D~~eML~~~g~-gVaMgNa~ 1004 (1054)
||+-+|| +.|-..+|. +|.|..+.
T Consensus 204 GDs~~~D-I~gA~~aG~~si~V~~G~ 228 (253)
T d1wvia_ 204 GDNYLTD-ITAGIKNDIATLLVTTGF 228 (253)
T ss_dssp ESCTTTT-HHHHHHTTCEEEEESSSS
T ss_pred CCCHHHH-HHHHHHCCCCEEEECCCC
T ss_conf 2780777-999998799799989899
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.14 E-value=1e-06 Score=59.42 Aligned_cols=77 Identities=10% Similarity=-0.018 Sum_probs=54.0
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEE
Q ss_conf 29999899999999994998467899967678866122236754089966831357854101587766654468986599
Q 001557 952 PVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQ 1031 (1054)
Q Consensus 952 P~~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 1031 (1054)
..+.+|+..++.++++++++.+++++ +||+.+ | +.|++.++.++||++.. ........ .+
T Consensus 141 ~~~~~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-l~~a~~A~~~~a~~~~~--~~~~~~~~---------------~~ 200 (226)
T d2feaa1 141 TCSNQCGCCKPSVIHELSEPNQYIIM-IGDSVT-D-VEAAKLSDLCFARDYLL--NECREQNL---------------NH 200 (226)
T ss_dssp TCCSCCSSCHHHHHHHHCCTTCEEEE-EECCGG-G-HHHHHTCSEEEECHHHH--HHHHHTTC---------------CE
T ss_pred CCCCCCHHHHHHHHHHHCCCCCEEEE-EECCHH-H-HHHHHHCCEEEEECCHH--HHHHHCCC---------------CE
T ss_conf 25567899999999984678863899-807631-3-99999889978706467--99998299---------------83
Q ss_pred ECCCCCHHHHHHHHHHHC
Q ss_conf 426469789999998715
Q 001557 1032 VDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 1032 ~t~~~~~~gI~~aL~~~~ 1049 (1054)
+ .--+-.+|...|+++-
T Consensus 201 ~-~~~d~~~i~~~l~~~~ 217 (226)
T d2feaa1 201 L-PYQDFYEIRKEIENVK 217 (226)
T ss_dssp E-CCSSHHHHHHHHHTSH
T ss_pred E-ECCCHHHHHHHHHHHH
T ss_conf 6-2499999999999987
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.93 E-value=0.0006 Score=40.84 Aligned_cols=289 Identities=13% Similarity=0.126 Sum_probs=157.8
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEECCC-CCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 9999999864315999996429997589-704999999725999899992798320489998717787564655767999
Q 001557 288 IIQISKVLGEQVGSGQPIWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMR 366 (1054)
Q Consensus 288 i~~~~~~L~~~~~~~~~~~pDIIh~h~~-~~g~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~r 366 (1054)
+..+.+.+.+ .+||+|..+.- ...++++..+...++|+++---+.-... ........ ..|
T Consensus 75 i~~~~~~~~~-------~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s~~---------~~~~~pde---~~R 135 (376)
T d1f6da_ 75 LEGLKPILAE-------FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGD---------LYSPWPEE---ANR 135 (376)
T ss_dssp HHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSC---------TTSSTTHH---HHH
T ss_pred HHHHHHHHHH-------CCCCCEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCC---------CCCCCCHH---HHH
T ss_conf 9864788974-------5676224310344313689998740753899852446542---------00047406---655
Q ss_pred HHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC-CCCCCCC-CCCCCC
Q ss_conf 99999964302798995698899999954069984789999996822644578889968994999-8688744-589998
Q 001557 367 RIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPG-IEFHHIV-RHNGDV 444 (1054)
Q Consensus 367 ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~r~~~gv~~~g~~~~kv~vIPnG-ID~~~f~-p~~~~~ 444 (1054)
.. .-+.|+..+|+++...+.+.+. +..+. ++.++.+. +|.-... +....
T Consensus 136 ~~-----iskls~~hf~~~~~~~~~L~~~--G~~~~---------------------~I~~vG~~~~D~l~~~~~~~~~- 186 (376)
T d1f6da_ 136 TL-----TGHLAMYHFSPTETSRQNLLRE--NVADS---------------------RIFITGNTVIDALLWVRDQVMS- 186 (376)
T ss_dssp HH-----HHHTCSEEEESSHHHHHHHHHT--TCCGG---------------------GEEECCCHHHHHHHHHHHHTTT-
T ss_pred HH-----HCCCEEEEEECCHHHHHHHHHC--CCCCC---------------------CCCEECCCHHHHHHHHHHHHHC-
T ss_conf 42-----0320048874347888687751--89865---------------------3412167248788887765423-
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHH-HHCCCCCCCE-EEEEECCC-CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHH
Q ss_conf 87443367999999983157774-2118999868-99992899-878999999999844023699839999933999202
Q 001557 445 DGEVERDEGSPASPDPPIWSEIM-HFFSNPRKPM-ILALARPD-PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDE 521 (1054)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-IL~vgRld-~~Kgi~~li~A~~~l~~~~~~~~l~LIiG~~~~~~~ 521 (1054)
.......... ..+..+++++ ++.+=|.. ..+++..++.++..+.... .++.++.-..+..
T Consensus 187 -------------~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~--~~~~ii~p~~~~~-- 249 (376)
T d1f6da_ 187 -------------SDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTH--QDIQIVYPVHLNP-- 249 (376)
T ss_dssp -------------CHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHC--TTEEEEEECCBCH--
T ss_pred -------------CCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC--CEEEEECCCCCCH--
T ss_conf -------------51232111102233477776699833541111200999999986543421--4047852544321--
Q ss_pred HHHCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC
Q ss_conf 20102999999999998819999788399999894999999821399299963998998689999998498799906667
Q 001557 522 MSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG 601 (1054)
Q Consensus 522 ~~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~~ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAmA~G~PVIat~~Gg 601 (1054)
.....+. ..+....++.+...++..+...+++.| .+++- ..+-.+.||...|+|+|.-..+.
T Consensus 250 ------~~~~~~~---~~~~~~~ni~~~~~l~~~~fl~ll~~a----~~vig-----nSssgi~Ea~~lg~P~Inir~~t 311 (376)
T d1f6da_ 250 ------NVREPVN---RILGHVKNVILIDPQEYLPFVWLMNHA----WLILT-----DSGGIQEEAPSLGKPVLVMRDTT 311 (376)
T ss_dssp ------HHHHHHH---HHHTTCTTEEEECCCCHHHHHHHHHHC----SEEEE-----SSSGGGGTGGGGTCCEEECSSCC
T ss_pred ------HHHHHHH---HHHCCCCCCEEECCCCHHHHHHHHHHC----EEEEE-----CCCCHHHHHHHHCCCEEECCCCC
T ss_conf ------2444676---664044451332355678999998416----39983-----68506766787489889727876
Q ss_pred -CCCCEEECCCEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHH
Q ss_conf -42201207745991999999999999999819999999999999998-609979999999999998
Q 001557 602 -PVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 602 -~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~a~~~v-~~fsw~~~a~~yl~~l~~ 666 (1054)
-++-+.. .+-++++ .|.+++.+++.+++.++..... .... ..|--...+++..+.++.
T Consensus 312 er~~~~~~-g~~i~v~-~~~~~I~~ai~~~l~~~~~~~~-----~~~~~npYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 312 ERPEAVTA-GTVRLVG-TDKQRIVEEVTRLLKDENEYQA-----MSRAHNPYGDGQACSRILEALKN 371 (376)
T ss_dssp SCHHHHHH-TSEEECC-SSHHHHHHHHHHHHHCHHHHHH-----HHHSCCTTCCSCHHHHHHHHHHH
T ss_pred CCCCCEEC-CEEEECC-CCHHHHHHHHHHHHHCHHHHHH-----HCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 57641236-8069878-9999999999999728576653-----04578989898499999999985
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.15 E-value=0.00052 Score=41.29 Aligned_cols=61 Identities=11% Similarity=0.037 Sum_probs=49.9
Q ss_pred EEEEEEECCCC---------CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC---------------HHHHHHHHHHCC
Q ss_conf 89999851899---------902599999999997215899965899986899---------------898999999279
Q 001557 770 YVFVIAADCDT---------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT---------------ILELHSLLVSGG 825 (1054)
Q Consensus 770 kliv~DiDGTL---------~~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~---------------~~~l~~~l~~~~ 825 (1054)
|-|+||+|||+ +..+.+.+.+.+..+.+. |..++|.|+|. ...+.+||+.+|
T Consensus 2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~~----G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~g 77 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQL----GFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQ 77 (124)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHT----TCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTT
T ss_pred CEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999378872889999827368489999999999987----99899995687545577577878889999999999829
Q ss_pred CCCCCCCEEEEC
Q ss_conf 999988679983
Q 001557 826 LSPLAFDAFICN 837 (1054)
Q Consensus 826 l~~~~~D~lI~~ 837 (1054)
++ +|-++..
T Consensus 78 I~---Yd~Li~g 86 (124)
T d1xpja_ 78 VP---YDEILVG 86 (124)
T ss_dssp CC---CSEEEEC
T ss_pred CC---CEEEEEC
T ss_conf 98---2388879
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.71 E-value=0.00078 Score=40.07 Aligned_cols=44 Identities=5% Similarity=-0.021 Sum_probs=37.0
Q ss_pred CCCCEEEEEEECCCCC---------------HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
Q ss_conf 5777899998518999---------------02599999999997215899965899986899
Q 001557 766 RRRKYVFVIAADCDTT---------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT 813 (1054)
Q Consensus 766 ~~~~kliv~DiDGTL~---------------~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~ 813 (1054)
+.+.|.++||+||||. ..+.+.+.++++.++++ |..++++|||+
T Consensus 4 ~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~~----G~~Iii~T~R~ 62 (149)
T d1ltqa1 4 PGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALM----GYQIVVVSGRE 62 (149)
T ss_dssp TTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHT----TCEEEEEECSC
T ss_pred CCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCC
T ss_conf 999968999748883827898757733304084487899999999844----48089992685
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.57 E-value=0.0012 Score=38.88 Aligned_cols=67 Identities=10% Similarity=-0.028 Sum_probs=49.3
Q ss_pred EEEEEECCCC-------CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHH---HHHHHHHCCCCCCCCCEEEECCCC
Q ss_conf 9999851899-------902599999999997215899965899986899898---999999279999988679983894
Q 001557 771 VFVIAADCDT-------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILE---LHSLLVSGGLSPLAFDAFICNSGS 840 (1054)
Q Consensus 771 liv~DiDGTL-------~~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~---l~~~l~~~~l~~~~~D~lI~~nGs 840 (1054)
-|++|+|||| ..++.+...+.|+++.++ |..++|.|+|+-.. ...||...+++ +|.+.-...-
T Consensus 2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L~~~----G~~IIi~TaR~~~~~~~t~~wL~~~~i~---yd~i~~~~~~ 74 (122)
T d2obba1 2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQE----KHRLILWSVREGELLDEAIEWCRARGLE---FYAANKDYPE 74 (122)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHT----TCEEEECCSCCHHHHHHHHHHHHTTTCC---CSEESSSSTT
T ss_pred EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCCCCHHHHHHHHHHCCCC---CEEHHCCCCC
T ss_conf 89997579708899976366459999999999987----9969999358886538899999981998---3450105766
Q ss_pred EEEC
Q ss_conf 7972
Q 001557 841 ELYY 844 (1054)
Q Consensus 841 ~I~~ 844 (1054)
-+++
T Consensus 75 ~~~~ 78 (122)
T d2obba1 75 EERD 78 (122)
T ss_dssp C---
T ss_pred CCCC
T ss_conf 8664
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.45 E-value=0.016 Score=31.17 Aligned_cols=160 Identities=16% Similarity=0.107 Sum_probs=94.9
Q ss_pred EEEEEEECCCCC----HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECC
Q ss_conf 899998518999----0259999999999721589996589998689989899999927999998867998389479727
Q 001557 770 YVFVIAADCDTT----SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 770 kliv~DiDGTL~----~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~~~~~D~lI~~nGs~I~~~ 845 (1054)
-++++|.+|+++ ..+.+.+.++|+.+++. |+.+.+.||=....+..+-+++|+.. .+ .+++..
T Consensus 3 ~~~~~d~~~~~~~~~~Dp~R~~~~~~I~~l~~~----GI~v~miTGD~~~tA~~ia~~~Gi~~--~~-------~~v~~~ 69 (168)
T d1wpga2 3 SVICSDKTGTLTTNQLDPPRKEVMGSIQLCRDA----GIRVIMITGDNKGTAIAICRRIGIFG--EN-------EEVADR 69 (168)
T ss_dssp CEEEECCTTTTBCCCECCBCTTHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHTTSSC--TT-------CCCTTT
T ss_pred EEEEECCCCEEEEEECCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHCCCCC--CC-------CCCCCC
T ss_conf 899978851788873488965399999999988----49899989999799999999849988--76-------411100
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHH
Q ss_conf 99988889986200743000003456846699999986310257778667521235655751289999639999951899
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKE 925 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~kis~~~~~~~~~~~v~e 925 (1054)
.+ ..+.+. .. ...+
T Consensus 70 -----------~~-------------~~~~~~----~~--------------------------------------~~~~ 83 (168)
T d1wpga2 70 -----------AY-------------TGREFD----DL--------------------------------------PLAE 83 (168)
T ss_dssp -----------EE-------------EHHHHH----HS--------------------------------------CHHH
T ss_pred -----------CC-------------CCCCCC----HH--------------------------------------HHHH
T ss_conf -----------03-------------463000----01--------------------------------------2788
Q ss_pred HHHHHHHHCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCH
Q ss_conf 99999974490999996288379971299998999999999949984678999676788661222367540899668313
Q 001557 926 LRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGE 1005 (1054)
Q Consensus 926 l~~~L~~~~~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~gVaMgNa~~ 1005 (1054)
+.+.+.. .. -+-.+.|. .|..-++.|.. .| .+++++||+.| | ..+|+.+..||+|+++.
T Consensus 84 ~~~~~~~----~~-------v~ar~~p~--~K~~lv~~l~~-~g----~~Va~vGDG~n-D-~~AL~~AdvGIa~~~gt- 142 (168)
T d1wpga2 84 QREACRR----AC-------CFARVEPS--HKSKIVEYLQS-YD----EITAMTGDGVN-D-APALKKAEIGIAMGSGT- 142 (168)
T ss_dssp HHHHHHH----CC-------EEESCCHH--HHHHHHHHHHH-TT----CCEEEEECSGG-G-HHHHHHSSEEEEETTSC-
T ss_pred HHHHHHH----HH-------HHHCCCHH--HHHHHHHHHHH-CC----CCEEEEECCCC-C-HHHHHHCCEEEEECCCC-
T ss_conf 7665532----23-------00000114--78889999874-04----54047706778-8-89998598888865511-
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 57854101587766654468986599426469789999998
Q 001557 1006 SARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLE 1046 (1054)
Q Consensus 1006 ~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~aL~ 1046 (1054)
...+.+++ ++-.+-+-..|.++++
T Consensus 143 -~~a~~aAd----------------ivl~~~~l~~v~~~I~ 166 (168)
T d1wpga2 143 -AVAKTASE----------------MVLADDNFSTIVAAVE 166 (168)
T ss_dssp -HHHHHTCS----------------EEETTCCTHHHHHHHH
T ss_pred -HHHHHHCC----------------EEECCCCHHHHHHHHH
T ss_conf -99998489----------------9991599899999997
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.30 E-value=0.026 Score=29.83 Aligned_cols=53 Identities=11% Similarity=-0.026 Sum_probs=45.1
Q ss_pred EEEEEEECCCC----CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 89999851899----9025999999999972158999658999868998989999992799
Q 001557 770 YVFVIAADCDT----TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 770 kliv~DiDGTL----~~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l 826 (1054)
..++||-+|++ ...+.+..+++++.|++. |+.+.+.||-....+..+-+.+|+
T Consensus 4 ~~~~~d~~~~~~~g~~D~lr~~a~~~I~~L~~~----Gi~v~ilTGD~~~~a~~ia~~lgI 60 (135)
T d2b8ea1 4 TAVIFDKTGTLTKGKPDTLKESAKPAVQELKRM----GIKVGMITGDNWRSAEAISRELNL 60 (135)
T ss_dssp CEEEEECCCCCBCSCCCCBCTTHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHHTC
T ss_pred EEEEECCCEEEEEECCCCCCCCHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHHH
T ss_conf 999998914799736889981199999999985----997999758633555677765422
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=96.03 E-value=0.0051 Score=34.62 Aligned_cols=41 Identities=15% Similarity=-0.003 Sum_probs=31.1
Q ss_pred CEEEEEEECCCCC--------------HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
Q ss_conf 7899998518999--------------02599999999997215899965899986899
Q 001557 769 KYVFVIAADCDTT--------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT 813 (1054)
Q Consensus 769 ~kliv~DiDGTL~--------------~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~ 813 (1054)
+|++|||.||||. -.+.+.+.++|+.|++. |+.++++|..+
T Consensus 2 ~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~----g~~l~i~TNq~ 56 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKA----GYKLVMITNQD 56 (161)
T ss_dssp CEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHT----TEEEEEEEECT
T ss_pred CCEEEEECCCCEEEECCCCCCCCCHHHCEECCCHHHHHHHHHHC----CCCEEEECCCC
T ss_conf 81999918897673579887428889906875599999999873----87301104643
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=95.96 E-value=0.0079 Score=33.32 Aligned_cols=71 Identities=10% Similarity=0.057 Sum_probs=38.4
Q ss_pred HHHHHHHHHHCCE--EEEEEEECCEEEEEECCCCCHHHHHHHHHHHH--CCCCCCEEEEECCCCCCCCCCCCCCCCEE-E
Q ss_conf 9999999974490--99999628837997129999899999999994--99846789996767886612223675408-9
Q 001557 924 KELRKLMRIQALR--CHVIYCQNGTKLHVIPVLASRSQALRYLHVRW--GIDLSNVVVIAGECGDTDYEGLLGGVHKT-V 998 (1054)
Q Consensus 924 ~el~~~L~~~~~~--~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~--gi~~~~viaf~GD~~d~D~~eML~~~g~g-V 998 (1054)
..+...+...++. +..+.+.+. +....-....++.++.... ++++++++. +||+.. | +.+-..+|.. |
T Consensus 120 ~~~~~~l~~~gl~~~fd~i~~~~~----~~~~k~~p~~~~~~~~~~~~~~~~p~~~l~-VGD~~~-D-i~aA~~aG~~~i 192 (228)
T d2hcfa1 120 ASGRHKLKLPGIDHYFPFGAFADD----ALDRNELPHIALERARRMTGANYSPSQIVI-IGDTEH-D-IRCARELDARSI 192 (228)
T ss_dssp HHHHHHHHTTTCSTTCSCEECTTT----CSSGGGHHHHHHHHHHHHHCCCCCGGGEEE-EESSHH-H-HHHHHTTTCEEE
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHCCCCCCHHHHEE-ECCCHH-H-HHHHHHCCCEEE
T ss_conf 000012332012222222222233----443454157788876530024877668023-248727-8-999998499799
Q ss_pred EEC
Q ss_conf 966
Q 001557 999 ILK 1001 (1054)
Q Consensus 999 aMg 1001 (1054)
++.
T Consensus 193 ~v~ 195 (228)
T d2hcfa1 193 AVA 195 (228)
T ss_dssp EEC
T ss_pred EEC
T ss_conf 980
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=95.40 E-value=0.016 Score=31.28 Aligned_cols=68 Identities=15% Similarity=0.156 Sum_probs=43.9
Q ss_pred HHHHHHHHHCCE--EEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE
Q ss_conf 999999974490--9999962883799712999989999999999499846789996767886612223675408996
Q 001557 925 ELRKLMRIQALR--CHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 1000 (1054)
Q Consensus 925 el~~~L~~~~~~--~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~gVaM 1000 (1054)
.+...+...++. +..+++... ++.+--+.....+.++++|++++++++ +||+.+ | +.+-+.+|...+.
T Consensus 117 ~~~~~l~~~~l~~~F~~i~~~~~-----~~~~Kp~~~~~~~~~~~l~~~~~~~l~-igD~~~-d-i~aA~~~G~~~i~ 186 (218)
T d1te2a_ 117 MLEKVLTMFDLRDSFDALASAEK-----LPYSKPHPQVYLDCAAKLGVDPLTCVA-LEDSVN-G-MIASKAARMRSIV 186 (218)
T ss_dssp HHHHHHHHTTCGGGCSEEEECTT-----SSCCTTSTHHHHHHHHHHTSCGGGEEE-EESSHH-H-HHHHHHTTCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHCCCCCHHCEE-EEECHH-H-HHHHHHCCCEEEE
T ss_conf 11122222233322222223232-----221014578999999972999513089-960989-9-9999983997999
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=95.22 E-value=0.015 Score=31.42 Aligned_cols=73 Identities=12% Similarity=0.177 Sum_probs=47.6
Q ss_pred HHHHHHHHHHCCE--EEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC-EEEEE
Q ss_conf 9999999974490--99999628837997129999899999999994998467899967678866122236754-08996
Q 001557 924 KELRKLMRIQALR--CHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVH-KTVIL 1000 (1054)
Q Consensus 924 ~el~~~L~~~~~~--~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g-~gVaM 1000 (1054)
..++..+...++. +..+++. +..+..-.|.....+++.++++++++++. +||+.. | +.+-..+| .+|.+
T Consensus 123 ~~~~~~l~~~gl~~~f~~~~~~-----~~~~~~kp~p~~~~~~~~~~~~~~~~~~~-igD~~~-D-i~~A~~aG~~~i~v 194 (224)
T d2hsza1 123 KHVQPILTAFGIDHLFSEMLGG-----QSLPEIKPHPAPFYYLCGKFGLYPKQILF-VGDSQN-D-IFAAHSAGCAVVGL 194 (224)
T ss_dssp HHHHHHHHHTTCGGGCSEEECT-----TTSSSCTTSSHHHHHHHHHHTCCGGGEEE-EESSHH-H-HHHHHHHTCEEEEE
T ss_pred HHHHHHHHHCCCHHHCCCCCCC-----CCCCCCCCCCHHHHHHHHHHHHHHHCCCH-HCCCHH-H-HHHHHHCCCEEEEE
T ss_conf 8999999864963421431123-----33454432101357899886431100202-117698-9-99999909959999
Q ss_pred CCCC
Q ss_conf 6831
Q 001557 1001 KGVG 1004 (1054)
Q Consensus 1001 gNa~ 1004 (1054)
..+.
T Consensus 195 ~~g~ 198 (224)
T d2hsza1 195 TYGY 198 (224)
T ss_dssp SSSC
T ss_pred ECCC
T ss_conf 1799
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.03 E-value=0.012 Score=32.05 Aligned_cols=46 Identities=17% Similarity=0.210 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEE-EECC
Q ss_conf 999899999999994998467899967678866122236754089-9668
Q 001557 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTV-ILKG 1002 (1054)
Q Consensus 954 ~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~gV-aMgN 1002 (1054)
.-.|...+..+++++|+++++++. +||+.. | +..-+.+|... .+.+
T Consensus 97 ~kp~~~~~~~~~~~~~~~~~~~l~-igD~~~-d-i~aA~~aG~~~i~v~~ 143 (164)
T d1u7pa_ 97 PGSKVTHFERLHHKTGVPFSQMVF-FDDENR-N-IIDVGRLGVTCIHIRD 143 (164)
T ss_dssp SSCHHHHHHHHHHHHCCCGGGEEE-EESCHH-H-HHHHHTTTCEEEECSS
T ss_pred CCCCHHHHHHHHHHHCCCHHHEEE-ECCCHH-H-HHHHHHCCCEEEEECC
T ss_conf 689769999999996888699798-748787-8-9999986997999799
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=95.00 E-value=0.08 Score=26.55 Aligned_cols=113 Identities=15% Similarity=0.093 Sum_probs=64.6
Q ss_pred HCCCCCCCEEE-EEE-CCCCCCC--HHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCHHHHHHHHHHHHHHCCCCC
Q ss_conf 11899986899-992-8998789--9999999984402369983999993399920220102999999999998819999
Q 001557 469 FFSNPRKPMIL-ALA-RPDPKKN--ITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 544 (1054)
Q Consensus 469 ~~~~~~~~~IL-~vg-Rld~~Kg--i~~li~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~li~~~~l~~ 544 (1054)
+....+++.|+ ..| ...+.|. .+...+....+.+ ....+ +++|+..+.+. ...+...+.......
T Consensus 174 ~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~--~~~~i-vl~g~~~e~~~--------~~~~~~~~~~~~~~~ 242 (348)
T d1pswa_ 174 FSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID--EGYQV-VLFGSAKDHEA--------GNEILAALNTEQQAW 242 (348)
T ss_dssp TTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH--TTCEE-EECCCGGGHHH--------HHHHHTTSCHHHHTT
T ss_pred HCCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHH--CCCCC-CCCCCCCHHHH--------HHHHHHHHHCCCCCC
T ss_conf 33355787699535532232216446777666777764--48742-22444105999--------888887631014653
Q ss_pred CEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC
Q ss_conf 788399999894999999821399299963998998689999998498799906667
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG 601 (1054)
Q Consensus 545 ~V~~~g~~~~~el~~ly~~Aa~~~Dv~i~ps~~Egfgl~l~EAmA~G~PVIat~~Gg 601 (1054)
.+.+.|..+..++..++..| +++|-+. ...+--|.|+|+|+|+-..+.
T Consensus 243 ~~~l~g~~sl~el~~li~~a----~l~I~~D-----tg~~HlAaa~g~p~i~lfg~~ 290 (348)
T d1pswa_ 243 CRNLAGETQLDQAVILIAAC----KAIVTND-----SGLMHVAAALNRPLVALYGPS 290 (348)
T ss_dssp EEECTTTSCHHHHHHHHHTS----SEEEEES-----SHHHHHHHHTTCCEEEEESSS
T ss_pred CCCCCCCCCHHHHHHHHHCC----EEEEECC-----CCHHHHHHHCCCCEEEEECCC
T ss_conf 33555774378899987433----0576158-----608899998299989997899
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=94.93 E-value=0.0084 Score=33.13 Aligned_cols=40 Identities=13% Similarity=0.017 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 59999999999721589996589998689989899999927999
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 784 ~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~ 827 (1054)
+.+.++++|+.+++. |+.++++||++...+..+++.+|+.
T Consensus 216 p~~~v~~~l~~lk~a----Gi~v~i~Tg~~~~~a~~il~~lgl~ 255 (380)
T d1qyia_ 216 PVDEVKVLLNDLKGA----GFELGIATGRPYTETVVPFENLGLL 255 (380)
T ss_dssp CHHHHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHHTCG
T ss_pred CHHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHCCCC
T ss_conf 436399999999987----9959998899799999999981995
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.43 E-value=0.021 Score=30.51 Aligned_cols=47 Identities=9% Similarity=0.193 Sum_probs=38.4
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 9999899999999994998467899967678866122236754089966831
Q 001557 953 VLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVG 1004 (1054)
Q Consensus 953 ~~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~gVaMgNa~ 1004 (1054)
....|+..++.+...++ ++++++ +||+.+ | +.|++.++.+|||++..
T Consensus 150 ~~~~K~~~v~~~~~~~~--~~~~~~-vGDs~~-D-i~~~~~ag~~va~~~~~ 196 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFH--FKKIIM-IGDGAT-D-MEACPPADAFIGFGGNV 196 (217)
T ss_dssp STTHHHHHHHHHHHHHC--CSCEEE-EESSHH-H-HTTTTTSSEEEEECSSC
T ss_pred CCCHHHHHHHHHHHCCC--CCCCEE-EEECHH-H-HHHHHHCCCEEEECCCH
T ss_conf 42208999999986348--666389-971786-5-99898689219979877
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.90 E-value=0.14 Score=24.97 Aligned_cols=68 Identities=12% Similarity=0.116 Sum_probs=44.3
Q ss_pred HHHHHHCCE--EEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCE-EEEECCC
Q ss_conf 999974490--999996288379971299998999999999949984678999676788661222367540-8996683
Q 001557 928 KLMRIQALR--CHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKGV 1003 (1054)
Q Consensus 928 ~~L~~~~~~--~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~-gVaMgNa 1003 (1054)
..|...++. +..+++... . ...=.+...++++++++|+++++++. +||+.. | +.+-..+|. +|.+.+.
T Consensus 113 ~~l~~~gl~~~f~~i~~s~~-~----~~~Kp~~~~~~~~~~~~~~~p~~~l~-VgD~~~-D-i~~A~~~G~~~i~v~~~ 183 (204)
T d2go7a1 113 TILKDLGVESYFTEILTSQS-G----FVRKPSPEAATYLLDKYQLNSDNTYY-IGDRTL-D-VEFAQNSGIQSINFLES 183 (204)
T ss_dssp HHHHHHTCGGGEEEEECGGG-C----CCCTTSSHHHHHHHHHHTCCGGGEEE-EESSHH-H-HHHHHHHTCEEEESSCC
T ss_pred HHHHHCCCCCCCCCCCCCCC-C----CCCCHHHHHHHHHHHHHCCCCCEEEE-EECCHH-H-HHHHHHCCCEEEEECCC
T ss_conf 43331012212222222223-4----43202578889999982999751899-947989-9-99999869969998479
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=93.53 E-value=0.032 Score=29.26 Aligned_cols=44 Identities=16% Similarity=0.001 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCE-EEEECCCC
Q ss_conf 999999999949984678999676788661222367540-89966831
Q 001557 958 SQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKGVG 1004 (1054)
Q Consensus 958 g~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~-gVaMgNa~ 1004 (1054)
...+...++.+++++++++. +||+-+ | +.+=..+|. ++++.+..
T Consensus 132 p~ml~~a~~~~~i~~~~~~~-VGD~~~-D-i~aA~~AGi~~i~v~~g~ 176 (209)
T d2o2xa1 132 PGMLVEAGKRLALDLQRSLI-VGDKLA-D-MQAGKRAGLAQGWLVDGE 176 (209)
T ss_dssp CHHHHHHHHHHTCCGGGCEE-EESSHH-H-HHHHHHTTCSEEEEETCC
T ss_pred CHHHHHHHHHHCCCCCCEEE-ECCCHH-H-HHHHHHCCCCEEEEECCC
T ss_conf 01566767773899412689-579788-9-999998799489994899
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=93.44 E-value=0.063 Score=27.26 Aligned_cols=44 Identities=14% Similarity=0.073 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCE--EEEECCCC
Q ss_conf 999999999949984678999676788661222367540--89966831
Q 001557 958 SQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK--TVILKGVG 1004 (1054)
Q Consensus 958 g~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~--gVaMgNa~ 1004 (1054)
-.-+...+++|++++++++. +||+.. | +.+=..+|. .+.+.+..
T Consensus 111 p~m~~~~~~~~~i~~~~s~m-VGDs~~-D-i~aA~~Ag~~~~~lv~~g~ 156 (182)
T d2gmwa1 111 PGMLLSARDYLHIDMAASYM-VGDKLE-D-MQAAVAANVGTKVLVRTGK 156 (182)
T ss_dssp CHHHHHHHHHHTBCGGGCEE-EESSHH-H-HHHHHHTTCSEEEEESSSS
T ss_pred CCCCCCHHHHCCCCCCCCCC-CCCCHH-H-HHHHHHHCCCCEEEECCCC
T ss_conf 32231012211655344512-279899-9-9999982888479989997
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.43 E-value=0.022 Score=30.26 Aligned_cols=39 Identities=8% Similarity=-0.035 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 9999999999721589996589998689989899999927999
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 785 ~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~ 827 (1054)
.+.+.++++.++++ |+.++|+||=....+..+++.+|++
T Consensus 84 ~pg~~~~i~~lk~~----G~~~~ivS~~~~~~v~~i~~~lgi~ 122 (217)
T d1nnla_ 84 TPGIRELVSRLQER----NVQVFLISGGFRSIVEHVASKLNIP 122 (217)
T ss_dssp CTTHHHHHHHHHHT----TCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCCC
T ss_conf 77799999999737----9979998999358888889870996
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=92.85 E-value=0.2 Score=23.84 Aligned_cols=73 Identities=4% Similarity=-0.037 Sum_probs=49.2
Q ss_pred HHHHHHHHHHCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCE-EEEECC
Q ss_conf 9999999974490999996288379971299998999999999949984678999676788661222367540-899668
Q 001557 924 KELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKG 1002 (1054)
Q Consensus 924 ~el~~~L~~~~~~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~-gVaMgN 1002 (1054)
..++..+...++...+ . ..+..-+.+-.|...+.++++++|+++++++. +||+.+ | +.+-..+|. +|.+..
T Consensus 111 ~~~~~~l~~~gl~~~f----d-~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~-VGDs~~-D-i~aa~~aGi~~i~v~~ 182 (210)
T d2ah5a1 111 STAQDMAKNLEIHHFF----D-GIYGSSPEAPHKADVIHQALQTHQLAPEQAII-IGDTKF-D-MLGARETGIQKLAITW 182 (210)
T ss_dssp HHHHHHHHHTTCGGGC----S-EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEE-EESSHH-H-HHHHHHHTCEEEEESS
T ss_pred HHHHHHHHHHCCCCCC----C-CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEE-ECCCHH-H-HHHHHHCCCEEEEECC
T ss_conf 0115778750123320----0-00222322222333211012332012001646-547778-9-9999985993999857
Q ss_pred CC
Q ss_conf 31
Q 001557 1003 VG 1004 (1054)
Q Consensus 1003 a~ 1004 (1054)
+.
T Consensus 183 g~ 184 (210)
T d2ah5a1 183 GF 184 (210)
T ss_dssp SS
T ss_pred CC
T ss_conf 98
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.60 E-value=0.1 Score=25.90 Aligned_cols=45 Identities=13% Similarity=0.175 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC-EEEEECCCC
Q ss_conf 899999999994998467899967678866122236754-089966831
Q 001557 957 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVH-KTVILKGVG 1004 (1054)
Q Consensus 957 Kg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g-~gVaMgNa~ 1004 (1054)
........++++++++++++. +||+.. | +.+=+.+| .+|.+.+..
T Consensus 159 ~p~~~~~~~~~~~v~p~~~l~-IgD~~~-D-i~~A~~aG~~ti~V~~~~ 204 (222)
T d1cr6a1 159 EPQIYNFLLDTLKAKPNEVVF-LDDFGS-N-LKPARDMGMVTILVHNTA 204 (222)
T ss_dssp CHHHHHHHHHHHTSCTTSEEE-EESSST-T-THHHHHHTCEEEECCSSS
T ss_pred CHHHHHHHHHHHCCCCCEEEE-EECCHH-H-HHHHHHCCCEEEEECCCC
T ss_conf 827777888872898632899-977988-7-999998599899989940
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=92.54 E-value=0.077 Score=26.65 Aligned_cols=56 Identities=11% Similarity=-0.046 Sum_probs=42.9
Q ss_pred CCEEEEEEECCCCC-------------HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 77899998518999-------------0259999999999721589996589998689989899999927999
Q 001557 768 RKYVFVIAADCDTT-------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 768 ~~kliv~DiDGTL~-------------~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR~~~~l~~~l~~~~l~ 827 (1054)
.-|+++||+||+|| +.....--.+++.+++. ++.+++.||+....+......+++.
T Consensus 4 ~ik~~i~DvDGVlTDG~v~~~~dG~e~k~F~~~Dg~gi~~l~~~----gi~~~iis~~~~~~v~~~~~~l~~~ 72 (177)
T d1k1ea_ 4 NIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDA----DIQVAVLSGRDSPILRRRIADLGIK 72 (177)
T ss_dssp GCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHT----TCEEEEEESCCCHHHHHHHHHHTCC
T ss_pred CCEEEEECCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHH----CEEEEEECCCCHHHHHHHHHHHCCC
T ss_conf 37199981677506886999389979999977604888787652----1789996698446789987632122
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.53 E-value=0.013 Score=31.79 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=32.8
Q ss_pred EEEEE---CCCCCHHHHHHHHHHHHCC--CCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 79971---2999989999999999499--8467899967678866122236754
Q 001557 947 KLHVI---PVLASRSQALRYLHVRWGI--DLSNVVVIAGECGDTDYEGLLGGVH 995 (1054)
Q Consensus 947 ~lEV~---P~~asKg~AL~~L~~~~gi--~~~~viaf~GD~~d~D~~eML~~~g 995 (1054)
...+. +...+|+..+.....++.. +.+++++ +||+-+ | +.|..++.
T Consensus 194 ~~~~~~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~-iGDs~~-D-l~Ma~g~~ 244 (291)
T d2bdua1 194 LKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNIIL-LGDSQG-D-LRMADGVA 244 (291)
T ss_dssp EEEECSSCCCTTCHHHHHHTTHHHHHHTTTCCEEEE-EESSSG-G-GGTTTTCS
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEE-EECCHH-H-HHHHHCCC
T ss_conf 860347864345686315445998853278676899-967776-8-99983885
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=92.25 E-value=0.064 Score=27.22 Aligned_cols=44 Identities=16% Similarity=0.165 Sum_probs=30.9
Q ss_pred CCCH--HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 9998--999999999949984678999676788661222367540899668
Q 001557 954 LASR--SQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKG 1002 (1054)
Q Consensus 954 ~asK--g~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~gVaMgN 1002 (1054)
+..| .......+++++++ +++. +||+.. | +.+-+.+|...+.=+
T Consensus 131 ~~~KP~p~~~~~~~~~~~~~--~~l~-vgDs~~-D-i~aA~~aG~~~i~v~ 176 (187)
T d2fi1a1 131 FKRKPNPESMLYLREKYQIS--SGLV-IGDRPI-D-IEAGQAAGLDTHLFT 176 (187)
T ss_dssp CCCTTSCHHHHHHHHHTTCS--SEEE-EESSHH-H-HHHHHHTTCEEEECS
T ss_pred CCCCCCHHHHHHHHHHCCCC--CEEE-EECCHH-H-HHHHHHCCCEEEEEC
T ss_conf 45688899999999984999--7699-907999-9-999998599799999
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=91.23 E-value=0.057 Score=27.54 Aligned_cols=69 Identities=19% Similarity=0.160 Sum_probs=44.4
Q ss_pred HHHHHHHHHHCC--EEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE
Q ss_conf 999999997449--09999962883799712999989999999999499846789996767886612223675408996
Q 001557 924 KELRKLMRIQAL--RCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 1000 (1054)
Q Consensus 924 ~el~~~L~~~~~--~~~vi~s~~~~~lEV~P~~asKg~AL~~L~~~~gi~~~~viaf~GD~~d~D~~eML~~~g~gVaM 1000 (1054)
..+...+...++ .+..+++... ...+-.+...+..+++++|+++++++. +||+.. | +.+=..+|..+++
T Consensus 109 ~~~~~~l~~~~l~~~f~~i~~~~~-----~~~~KP~p~~~~~~~~~~~~~~~~~l~-VgDs~~-D-i~~a~~aG~~~i~ 179 (207)
T d2hdoa1 109 NELESGMRSYPFMMRMAVTISADD-----TPKRKPDPLPLLTALEKVNVAPQNALF-IGDSVS-D-EQTAQAANVDFGL 179 (207)
T ss_dssp HHHHHHHTTSGGGGGEEEEECGGG-----SSCCTTSSHHHHHHHHHTTCCGGGEEE-EESSHH-H-HHHHHHHTCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-----CCCCHHHHHHHCCCCCCEEEECCCEEE-ECCCHH-H-HHHHHHCCCEEEE
T ss_conf 111111122222222222222222-----222103444300234210451134068-547787-8-9999984992999
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.28 E-value=0.065 Score=27.14 Aligned_cols=70 Identities=14% Similarity=0.155 Sum_probs=46.4
Q ss_pred CCCCCCCEEEEEEECCCC--C-------------HHHHHHHHHHHHHHHCCCCCCCEEEEEECCC--------CHHHH--
Q ss_conf 743577789999851899--9-------------0259999999999721589996589998689--------98989--
Q 001557 763 PALRRRKYVFVIAADCDT--T-------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTAL--------TILEL-- 817 (1054)
Q Consensus 763 ~~~~~~~kliv~DiDGTL--~-------------~~~~~~~~~aL~~l~~~~~~~gi~fvIaTGR--------~~~~l-- 817 (1054)
+.++.++|+++||.|||| + .-+.+.+.++|+.|.++ |..++|.|-- +...+
T Consensus 15 ~~~~~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L~~~----gy~iiIvTNQ~gI~rg~~s~~~~~~ 90 (195)
T d1yj5a1 15 SGVKPQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE----GYKLVIFTNQMGIGRGKLPAEVFKG 90 (195)
T ss_dssp TTCCCCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHHHHH----TCEEEEEEECHHHHHTSSCHHHHHH
T ss_pred CCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHCEECCCCHHHHHHHHHHC----CCEEEEECCCCHHCCCCCCHHHHHH
T ss_conf 998876808999789951754899867898466345167799999999867----8479995276301048769999999
Q ss_pred --HHHHHHCCCCCCCCCEEEECCC
Q ss_conf --9999927999998867998389
Q 001557 818 --HSLLVSGGLSPLAFDAFICNSG 839 (1054)
Q Consensus 818 --~~~l~~~~l~~~~~D~lI~~nG 839 (1054)
..++++++.+ .+.++|.+.
T Consensus 91 ~~~~i~~~l~~~---~~i~~~~~~ 111 (195)
T d1yj5a1 91 KVEAVLEKLGVP---FQVLVATHA 111 (195)
T ss_dssp HHHHHHHHHTSC---CEEEEECSS
T ss_pred HHHHHHHHCCCC---CCEEEECCC
T ss_conf 999999986998---648981576
|