Citrus Sinensis ID: 001727

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020
MDQKAWLWRKKSSEKTIVATDKVGVTLNQIDEQVPIVPTTKGVGSERSMKNLNEQLASVIFDCHPKDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDETLKPPLSANENLPYAGAATAPMKCVKQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERIAKLAAENSHLSKALLVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKENAFLKYEFRILEKELEIRNEEMEYTRRSVEATHKQHLESVKKVAKLEAECERLRLLVRKKLPGSAASAKMKSEVEMQGRDQMDMRRRKLSPTRDLIVRHATTESSHDISLLARLHDMEKENRTLKDIVITKSTELQASRMMFSRTASRLSYVESQLREICTGQKSMELTGCVPISSELSIMSVDNASDDGMSSSGSWANALISELEHFRDGKIKNQLEHKGIEVSGMSLMDDFVEIEKLAIVSAETPSGSGYQSDVTSKELVPLVRSDSRLSEIKQEIHSKDVATEKSFDWLQVVLNAMLKQRQISKQSLDKLLEDIRIALGYVNYPTVVAADSVAASTQPRESKSPNTSYIAHSLPGDCRNGKERSSQHLESDLSKSICKIIELIEGVNVTSSVSHPYSVHVFQWNPSELHAVLQKFVCACNDLLGGKADLDKFAEELSSALDWIMNNCIAHKDASRARNKVKKHFGLLVESNEVHIPEEQSSASLQGQNVLSQSNLQEENRRLRDELKSMAARLESATDRSEALVTQLHESEEQIGNLETEVKALKESKEMIEDQMENQKSINEDLDTQLTVAKAKLNEGFQKFSSLEVELEYRNNFCEELEATCLELQLQLESVAKREPPSYGVNQGEKQSQNGWEMTAASIKLAECQETILNLGKQLKALASPREAVLFDKVFSTTNPAITATNNRRLNQRFSLRDRMLADDSSKTDPFKSSNSKATLSIKDGPKPSLLHSDDCNGVDAPIVQVHTPEVHTALENKASNTAVGSSLAVVPSKKRGVGLLLKLFLRRKKGSSKNSRSLAKV
ccccccccccHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHcccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHcccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccHHHHHHHHHHccccccccccccc
ccccccccEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHcccccccHcccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccHHHHcHHHHHHccccccccccHHHHHHHccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHccHHHHHHHHHHHHHHHHHHHcccHcHHHHHHHHHHHHHHHHHHcccHcccHHHHHHHHHHcccccccccccccccccccccccccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcccEcccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccEEEEEcccccccHHHHHHHHHHHccccccccEEccc
MDQKAWLwrkkssektivatDKVGVTLnqideqvpivpttkgvgserSMKNLNEQLASVIFDCHPKDELMAKQAKLVQEagagqekpEVAAAVVKKELdetlkpplsanenlpyagaatapmkcvkqlnfdqaEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERIAKLAAENSHLSKALLVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKENAFLKYEFRILEKELEIRNEEMEYTRRSVEATHKQHLESVKKVAKLEAECERLRLLVRKklpgsaasaKMKSEVEMqgrdqmdmrrrklsptrdLIVRHATTESSHDISLLARLHDMEKENRTLKDIVITKSTELQASRMMFSRTASRLSYVESQLREICTgqksmeltgcvpisselsimsvdnasddgmsssgSWANALISELEhfrdgkiknqlehkgievsgmSLMDDFVEIEKLAIVSaetpsgsgyqsdvtskelvplvrsdsrlsEIKQEIHSKDVATEKSFDWLQVVLNAMLKQRQISKQSLDKLLEDIRIALGYVNYPTVVAAdsvaastqpreskspntsyiahslpgdcrngkerssqhLESDLSKSICKIIELIEgvnvtssvshpysvhvfqwnpseLHAVLQKFVCACNDLLGGKADLDKFAEELSSALDWIMNNCIAHKDASRARNKVKKHFGLLVesnevhipeeqssaslqgqnvlsqsnLQEENRRLRDELKSMAARLESATDRSEALVTQLHESEEQIGNLETEVKALKESKEMIEDQMENQKSINEDLDTQLTVAKAKLNEGFQKFSSLEVELEYRNNFCEELEATCLELQLQLESvakreppsygvnqgekqsqngWEMTAASIKLAECQETILNLGKQLKAlaspreavlfdkvfsttnpaitatnnrrlnqrfslrdrmladdssktdpfkssnskatlsikdgpkpsllhsddcngvdapivqvhtpevhtalenkasntavgsslavvpskkrgVGLLLKLFLRRkkgssknsrslakv
mdqkawlwrkkssektivatdkvgvtlnqideqvpivpttkgvgserSMKNLNEQLASVIFDCHPKDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDetlkpplsanENLPYAGAATAPMKCVKQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERIAKLaaenshlskaLLVKEKMIEDLSKRKSQaeaefstlmtrldvtekenAFLKYEFRILEKELEIRNEEMEYTRRSVEATHKQHLESVKKVAKLEAECERLRLlvrkklpgsaasakmksevemqgrdqmdmrrrklsptrdlivrhattesshdislLARLHDMekenrtlkdivitkstelqasrmmfsrTASRLSYVESQLREICtgqksmelTGCVPISSELSIMSVDNASDDGMSSSGSWANALISELEHFRDGKIKNQLEHKGIEVSGMSLMDDFVEIEKLAIVSAetpsgsgyqsdvtskelvplvrsdsrlseikqeihskdvateksFDWLQVVLNAMLKQRQISKQSLDKLLEDIRIALGYVNYPTVVAADSVAastqpreskspntsyIAHSLPGDCRNGKERSSQHLESDLSKSICKIIELIEGVNVTSSVSHPYSVHVFQWNPSELHAVLQKFVCACNDLLGGKADLDKFAEELSSALDWIMNNCIAHKDASRARNKVKKHFGLLVESNEVHIPEeqssaslqgqnvlsqsnlqeenRRLRDELKSMAARLESATDRSEALVTQlheseeqignlETEVKALKESKEMIEDQMENQKSINEDLDTQLTVAKAKLNEGFQKFSSLEVELEYRNNFCEELEATCLELQLQLESVAkreppsygvnqgekqsqnGWEMTAASIKLAECQETILNLGKQLKALASPREAVLFDKVFsttnpaitatnnrrlnqrfslrdrmladdssktdpfkssnskatlsikdgpkPSLLHSDDCNGVDAPIVQVHTPEVHTAlenkasntavgsslavvpskkrgvGLLLKLflrrkkgssknsrslakv
MDQKAWLWRKKSSEKTIVATDKVGVTLNQIDEQVPIVPTTKGVGSERSMKNLNEQLASVIFDCHPKDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDETLKPPLSANENLPYAGAATAPMKCVKQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERIAKLAAENSHLSKALLVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKENAFLKYEFRILEKELEIRNEEMEYTRRSVEATHKQHLESVKKVAKLEAECERLRLLVRKKLPGSAASAKMKSEVEmqgrdqmdmrrrKLSPTRDLIVRHATTESSHDISLLARLHDMEKENRTLKDIVITKSTELQASRMMFSRTASRLSYVESQLREICTGQKSMELTGCVPISSELSIMSVDNASDDGMSSSGSWANALISELEHFRDGKIKNQLEHKGIEVSGMSLMDDFVEIEKLAIVSAETPSGSGYQSDVTSKELVPLVRSDSRLSEIKQEIHSKDVATEKSFDWLQVVLNAMLKQRQISKQSLDKLLEDIRIALGYVNYPTvvaadsvaasTQPRESKSPNTSYIAHSLPGDCRNGKERSSQHLESDLSKSICKIIELIEGVNVTSSVSHPYSVHVFQWNPSELHAVLQKFVCACNDLLGGKADLDKFAEELSSALDWIMNNCIAHKDASRARNKVKKHFGLLVESNEVHIPEEQSSASLQGQNVLSQSNLQEENRRLRDELKSMAARLESATDRSEALVTQLHESEEQIGNLETEVKALKESKEMIEDQMENQKSINEDLDTQLTVAKAKLNEGFQKFSSLEVELEYRNNFCEELEATCLELQLQLESVAKREPPSYGVNQGEKQSQNGWEMTAASIKLAECQETILNLGKQLKALASPREAVLFDKVFSTTNPAITATNNRRLNQRFSLRDRMLADDSSKTDPFKSSNSKATLSIKDGPKPSLLHSDDCNGVDAPIVQVHTPEVHTALENKASNTAVGSSLAVVPskkrgvglllklflrrkkgssknsrsLAKV
*****WLWRK****KTIVATDKVGVTLNQIDEQVPIVPT****************LASVIFDCH***********************************************************CV********************************************************************************LMTRLDVTEKENAFLKYEFRILEKELEIR*************************AKLEAECERLRLLV*****************************************************L************LKDIVITK****************RLSYVESQLREICTGQKSMELTGCVPIS*********************WANALISELEHFRDGKIKNQLEHKGIEVSGMSLMDDFVEIEKLAIV****************************************VATEKSFDWLQVVLNAMLKQRQISKQSLDKLLEDIRIALGYVNYPTVVAAD********************************************SICKIIELIEGVNVTSSVSHPYSVHVFQWNPSELHAVLQKFVCACNDLLGGKADLDKFAEELSSALDWIMNNCIAHKDASRARNKVKKHFGLLV*****************************************************************************************************TVAKAKLNEGFQKFSSLEVELEYRNNFCEELEATCLELQLQL***********************WEMTAASIKLAECQETILNLGKQLKALASPREAVLFDKVFSTTNPAIT******************************************************GVDAPIVQVHTPEVHT*************SLAVVPSKKRGVGLLLKLFL****************
*DQKAWLWR**********************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************SLA**
MDQKAWLWRKKSSEKTIVATDKVGVTLNQIDEQVPIVPTTKGVGSERSMKNLNEQLASVIFDCHPKDELMAKQAKL************VAAAVVKKELDETLKPPLSANENLPYAGAATAPMKCVKQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERIAKLAAENSHLSKALLVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKENAFLKYEFRILEKELEIRNEEMEYTRRSVEATHKQHLESVKKVAKLEAECERLRLLVRKKL**********************MRRRKLSPTRDLIVRHATTESSHDISLLARLHDMEKENRTLKDIVITKSTELQASRMMFSRTASRLSYVESQLREICTGQKSMELTGCVPISSELSIMSVDNASDDGMSSSGSWANALISELEHFRDGKIKNQLEHKGIEVSGMSLMDDFVEIEKLAIVSAE***********TSKELVPLVRSDSRLSEIKQEIHSKDVATEKSFDWLQVVLNAMLKQRQISKQSLDKLLEDIRIALGYVNYPTVVAADS***************SYIAHSLPGDC**************LSKSICKIIELIEGVNVTSSVSHPYSVHVFQWNPSELHAVLQKFVCACNDLLGGKADLDKFAEELSSALDWIMNNCIAHKDASRARNKVKKHFGLLVESNEVHIPEEQSSASLQGQNVLSQSNLQEENRRLRDELKSMA*****************HESEEQIGNLETEVKALKESKEMIEDQMENQKSINEDLDTQLTVAKAKLNEGFQKFSSLEVELEYRNNFCEELEATCLELQLQLESVAKR***************NGWEMTAASIKLAECQETILNLGKQLKALASPREAVLFDKVFSTTNPAITATNNRRLNQRFSLRDRML******************LSIKDGPKPSLLHSDDCNGVDAPIVQVHTPEVHTALENKASNTAVGSSLAVVPSKKRGVGLLLKLFLRRK*************
*******************************************GSERSMKNLNEQLASVIFDCHPKDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDETLKPPLSANENLPYAGAATAPMKCVKQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERIAKLAAENSHLSKALLVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKENAFLKYEFRILEKELEIRNEEMEYTRRSVEATHKQHLESVKKVAKLEAECERLRLLVRKKLPGSAASAKMKSEV*M****************************SHDISLLARLHDMEKENRTLKDIVITKSTELQASRMMFSRTASRLSYVESQLREI*********************************************LEHFRDG*************SGMSLMDDFVEIEKLAIVS*****************************************TEKSFDWLQVVLNAMLKQRQISKQSLDKLLEDIRIALGYVNYPTVVAA***************NTSYIAHSLP*DCRNGKERSSQHLESDLSKSICKIIELIEGVNVTSSVSHPYSVHVFQWNPSELHAVLQKFVCACNDLLGGKADLDKFAEELSSALDWIMNNCIAHKDASRARNKVKKHFGLLV******************QNVLSQSNLQEENRRLRDELKSMAARLESATDRSEALVTQLHESEEQIGNLETEVKALKESKEMIEDQMENQKSINEDLDTQLTVAKAKLNEGFQKFSSLEVELEYRNNFCEELEATCLELQLQLESVAKR*************SQNGWEMTAASIKLAECQETILNLGKQLKALASPREAVLFDKVFST************************ADDS********************************GVDAPIVQVHTPEVHTALENKASNTAVGSSLAVVPSKKRGVGLLLKLFLRRKKG***********
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MDQKAWLWRKKSSEKTIVATDKVGVTLNQIDEQVPIVPTTKGVGSERSMKNLNEQLASVIFDCHPKDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDETLKPPLSANENLPYAGAATAPMKCVKQLNFDQAEQEQRVHDAVVKTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLEIRNEEMEYTRRSVEATHKQHLESVKKVAKLEAECERLRLLVRKKLPGSAASAKMKSEVEMQGRDQMDMRRRKLSPTRDLIVRHATTESSHDISLLARLHDMEKENRTLKDIVITKSTELQASRMMFSRTASRLSYVESQLREICTGQKSMELTGCVPISSELSIMSVDNASDDGMSSSGSWANALISELEHFRDGKIKNQLEHKGIEVSGMSLMDDFVEIEKLAIVSAETPSGSGYQSDVTSKELVPLVRSDSRLSEIKQEIHSKDVATEKSFDWLQVVLNAMLKQRQISKQSLDKLLEDIRIALGYVNYPTVVAADSVAASTQPRESKSPNTSYIAHSLPGDCRNGKERSSQHLESDLSKSICKIIELIEGVNVTSSVSHPYSVHVFQWNPSELHAVLQKFVCACNDLLGGKADLDKFAEELSSALDWIMNNCIAHKDASRARNKVKKHFGLLVESNEVHIPEEQSSASLQGQNVLSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLTVAKAKLNEGFQKFSSLEVELEYRNNFxxxxxxxxxxxxxxxxxxxxxEPPSYGVNQGEKQSQNGWEMTAASIKLAECQETILNLGKQLKALASPREAVLFDKVFSTTNPAITATNNRRLNQRFSLRDRMLADDSSKTDPFKSSNSKATLSIKDGPKPSLLHSDDCNGVDAPIVQVHTPEVHTALENKASNTAVGSSLAVVPSKKRGVGLLLKLFLRRKKGSSKNSRSLAKV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1020 2.2.26 [Sep-21-2011]
Q9SLN1898 Filament-like plant prote yes no 0.603 0.685 0.379 1e-104
Q0WSY2982 Filament-like plant prote no no 0.485 0.504 0.324 4e-61
Q9C6981054 Filament-like plant prote no no 0.775 0.750 0.271 1e-57
O65649996 Filament-like plant prote no no 0.435 0.445 0.298 9e-50
Q9MA92615 Filament-like plant prote no no 0.298 0.494 0.284 3e-23
Q9CAP9779 Filament-like plant prote no no 0.186 0.243 0.303 9e-16
Q8LLE5582 Filament-like plant prote N/A no 0.180 0.316 0.333 1e-15
Q9SFF4629 Filament-like plant prote no no 0.161 0.262 0.291 3e-10
>sp|Q9SLN1|FPP7_ARATH Filament-like plant protein 7 OS=Arabidopsis thaliana GN=FPP7 PE=3 SV=2 Back     alignment and function desciption
 Score =  380 bits (975), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 272/716 (37%), Positives = 411/716 (57%), Gaps = 100/716 (13%)

Query: 1   MDQKAWLWRKKSSEKTIVATDKVGVTLNQIDEQVPIVPTTKGVGSERSMKNLNEQLASVI 60
           MD KAW W+KKS EKT+V ++   V  ++I+              E  +K+LN++L SV 
Sbjct: 1   MDHKAWPWKKKSMEKTVVESNG-EVVADKIE-------------LEHRVKSLNDKLNSVE 46

Query: 61  FDCHPKDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDETLKPPLSANENLPYAGAATA 120
            + +       K     QEA  G EK +   A +KK+LDE L     + E   +  A   
Sbjct: 47  AESN-------KHETEAQEAIVGWEKTKAEVASLKKKLDEALNEKHRSEERSSHTDAGLK 99

Query: 121 PMKCVKQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERIAKLAAENSHLSK 180
             +CV+QL F + EQE+R+HDA+ K S E+E+    ++  L  + +R+A+   EN+ LSK
Sbjct: 100 --ECVQQLRFVREEQERRMHDALTKASQEYERRLIVIKTELAGSGKRLAEAEGENAQLSK 157

Query: 181 ALLVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKENAFLKYEFRILEKELEIRNEEMEY 240
           ALL K K +EDL++ + + E +F++L++ L+  EKEN  L+YE R+LEKELE+RNEE E+
Sbjct: 158 ALLAKNKTVEDLNRERDRIEVDFNSLVSSLESKEKENVSLRYEVRVLEKELELRNEEREF 217

Query: 241 TRRSVEATHKQHLESVKKVAKLEAECERLRLLVRKKLPGSAASAKMKSEVEMQGRDQMDM 300
           +RR+ EA+HK HLE+VKKVAKLE+EC+RLR+LVRK+LPG AA +KM +EVEM GR     
Sbjct: 218 SRRTAEASHKLHLENVKKVAKLESECQRLRVLVRKRLPGPAALSKMSNEVEMLGR----- 272

Query: 301 RRRKLSPTRDLIVRHATTESSHDISLLARLHDMEKENRTLKDIVITKSTELQASRMMFSR 360
           RR   SP   +I        +  + LL      E+EN+TL++ +  K +ELQ SR M+SR
Sbjct: 273 RRVNGSPHSPMIDSEKINNLTEQLCLL------EEENKTLREALNKKVSELQFSRNMYSR 326

Query: 361 TASRLSYVESQLREICTGQKSMELTGCVPISSELSIMSV---DNASDDGMSSSGSWANAL 417
           TASRL   ES L E   G  ++E +    +S E+S+ SV   DN  DD +S + SWA+AL
Sbjct: 327 TASRLLEFESHLEESSRGT-NIEPSRSSNVSHEVSLASVTEFDN--DDKVSCADSWASAL 383

Query: 418 ISELEHFRDGKIKNQLEHKGIEVSG------MSLMDDFVEIEKLAIV------------- 458
           +SEL++F++ K        G  + G      M LMDDF E+EKLA+V             
Sbjct: 384 LSELDNFKNKK------EMGTSLVGTPKAAEMKLMDDFAEMEKLAMVASTIDNRPGSSPI 437

Query: 459 -SAETPSGSGYQSDVTSKELVPLVRSDSRLSEIKQEIHSK-DVATEKSFDWLQVVLNAML 516
            S+++ S +G   + +++      ++   +  +  +   K D+ ++     L +VL A++
Sbjct: 438 CSSDSISATGPVENESNENSSEATKTSGTVYSLNPDASPKDDIKSDSLPQSLHIVLKAVM 497

Query: 517 KQRQISKQSLDKLLEDIRIALGYVNYPTVVAADSVAASTQPRESKSPNTSYIAHSLPGDC 576
           + + I++++ D++LEDIR AL  VN+ +         ST  +E+K   T  +   L  +C
Sbjct: 498 EHKHITQRNTDEVLEDIRKALSSVNHSSF--------STNHQETK---TLTVEDRLDMEC 546

Query: 577 RNGKERSSQHLESDLSKSICKIIELIEGV---------NVTSSVSHPYSVHVFQWNPSEL 627
                        ++SKSI +II++IEGV         N  S     Y+  V QW  +EL
Sbjct: 547 -------------NISKSIHRIIDVIEGVSLKDERHVSNRESERLSGYTARVLQWKTTEL 593

Query: 628 HAVLQKFVCACNDLLGGKADLDKFAEELSSALDWIMNNCIAHKDASRARNKVKKHF 683
            +VLQ+F+ AC DLL  KAD+ KFA+ELSS L+W++N+C + +D S  R+++KK F
Sbjct: 594 SSVLQRFLQACYDLLDRKADMKKFAQELSSVLEWMVNHCFSLQDVSTMRDEIKKQF 649

Arabidopsis thaliana (taxid: 3702)
>sp|Q0WSY2|FPP4_ARATH Filament-like plant protein 4 OS=Arabidopsis thaliana GN=FPP4 PE=2 SV=1 Back     alignment and function description
>sp|Q9C698|FPP6_ARATH Filament-like plant protein 6 OS=Arabidopsis thaliana GN=FPP6 PE=2 SV=1 Back     alignment and function description
>sp|O65649|FPP5_ARATH Filament-like plant protein 5 OS=Arabidopsis thaliana GN=FPP5 PE=2 SV=2 Back     alignment and function description
>sp|Q9MA92|FPP3_ARATH Filament-like plant protein 3 OS=Arabidopsis thaliana GN=FPP3 PE=2 SV=2 Back     alignment and function description
>sp|Q9CAP9|FPP1_ARATH Filament-like plant protein 1 OS=Arabidopsis thaliana GN=FPP1 PE=2 SV=1 Back     alignment and function description
>sp|Q8LLE5|FPP_SOLLC Filament-like plant protein (Fragment) OS=Solanum lycopersicum GN=FPP PE=1 SV=1 Back     alignment and function description
>sp|Q9SFF4|FPP2_ARATH Filament-like plant protein 2 OS=Arabidopsis thaliana GN=FPP2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1020
2555553831050 Myosin heavy chain, fast skeletal muscle 0.971 0.943 0.542 0.0
2254288611098 PREDICTED: filament-like plant protein 7 0.988 0.918 0.527 0.0
147791289 1124 hypothetical protein VITISV_042269 [Viti 0.985 0.894 0.461 0.0
3565025111014 PREDICTED: filament-like plant protein 7 0.944 0.949 0.457 0.0
3565197231014 PREDICTED: filament-like plant protein 7 0.934 0.939 0.460 0.0
3594807951111 PREDICTED: filament-like plant protein 7 0.972 0.892 0.460 0.0
357475279998 Filament-like plant protein [Medicago tr 0.921 0.941 0.436 0.0
255565282 1132 Myosin-9, putative [Ricinus communis] gi 0.960 0.865 0.420 0.0
147852602999 hypothetical protein VITISV_025322 [Viti 0.913 0.932 0.455 0.0
224084366947 predicted protein [Populus trichocarpa] 0.845 0.910 0.455 0.0
>gi|255555383|ref|XP_002518728.1| Myosin heavy chain, fast skeletal muscle, embryonic, putative [Ricinus communis] gi|223542109|gb|EEF43653.1| Myosin heavy chain, fast skeletal muscle, embryonic, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1002 bits (2591), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/1071 (54%), Positives = 745/1071 (69%), Gaps = 80/1071 (7%)

Query: 1    MDQKAWLWRKKSSEKTIVATDKVGVTLNQIDEQVPIVPTTKGVGSERSMKNLNEQLASVI 60
            MD K+WLW+KKSSEKTI+AT+K G+++  I+E++P+      VG  R ++NLNE+LASV+
Sbjct: 1    MDNKSWLWKKKSSEKTIIATNKFGISVKGINEELPL---GNEVGVARPVRNLNEKLASVL 57

Query: 61   FDCHPKDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDETLKPPLSANENLPYAGAATA 120
             D   KD+L+ KQ   VQE   GQEK E+    +KKELDE +K  ++ANE L  + AA  
Sbjct: 58   LDSRAKDDLVLKQENSVQEENTGQEKMEMQVVSLKKELDEAIKQGVAANEKLTISEAALK 117

Query: 121  PMKCVKQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERIAKLAAENSHLSK 180
              +C++QL     E+EQR HDA +K S E EKAQK+LE+ LRE ++R+A LA EN++LSK
Sbjct: 118  --QCMQQLRSVHQEEEQRRHDAFMKASRESEKAQKQLEEKLREMSKRLADLAIENTNLSK 175

Query: 181  ALLVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKENAFLKYEFRILEKELEIRNEEMEY 240
            AL++KEK++E+L K  SQ  AEF+ LM RLD TEKENAFLKYEF +LEKELE+R+EE+EY
Sbjct: 176  ALVLKEKLVEELHKHASQTAAEFNALMARLDSTEKENAFLKYEFHMLEKELEVRSEELEY 235

Query: 241  TRRSVEATHKQHLESVKKVAKLEAECERLRLLVRKKLPGSAASAKMKSEVEMQGRDQMDM 300
            TRRS E +H+QHLES++K+ KLEAEC+RL++LVRKKLPG AA AKMK+E+EM GRD ++ 
Sbjct: 236  TRRSAEVSHRQHLESIRKITKLEAECQRLQILVRKKLPGPAALAKMKNELEMLGRDSLE- 294

Query: 301  RRRKLSPTRDLIVRHATTESSHDIS------LLARLHDMEKENRTLKDIVITKSTELQAS 354
             RRK + TRDL++R    E S  I       L+ +L D E+EN+TLKDI+  K+ EL+++
Sbjct: 295  SRRKANLTRDLVLRDTPLEKSPVIPIKNINFLIEQLQDTEEENKTLKDILTKKNAELRSA 354

Query: 355  RMMFSRTASRLSYVESQLREICTGQKSMELTGCV-PISSELSIMS-VDNASDDGMSSSGS 412
            R+M+S TAS+LS VESQL  I  GQK+M++     P+S EL  +S  D  SDDG+SSSGS
Sbjct: 355  RIMYSHTASKLSQVESQLVVISKGQKAMDMVNSASPLSKELYPLSGFDTGSDDGVSSSGS 414

Query: 413  WANALISELEHFRDGKIKNQLEHKGIEVSGMSLMDDFVEIEKLAIVSAETPSGSGYQSDV 472
            WAN + SELEHFRD K+K+  E K IEVS +SLMDDFVE+EKLA+VSA+ PSG       
Sbjct: 415  WANPITSELEHFRDAKLKSLPECKSIEVSDISLMDDFVEMEKLALVSAQAPSGGCNHHLS 474

Query: 473  TSKELVPLVRSDSRLSEIKQEIHSKDVATEKSFDWLQVVLNAMLKQRQISKQSLDKLLED 532
              KELVP+V+S    S+ KQEIHSKD+AT+KSFDWLQ VLN + KQ++ISK+SL +LLED
Sbjct: 475  AGKELVPVVQSHFDCSD-KQEIHSKDIATDKSFDWLQEVLNTIFKQQRISKRSLIELLED 533

Query: 533  IRIALGYVNYPTVVAADSVAASTQPRES--------KSPNTSYIAHSL--PGDCRNGKER 582
            I+IALGYVN+P+ + AD+ A S  P ES        KSPN S +  S+         KE 
Sbjct: 534  IKIALGYVNHPSALEADTTAISRHPVESDIRSYITWKSPNISSVVESVNEASSVDTLKEE 593

Query: 583  SS-QHLESDLSKSICKIIELIEGVNVTSSVSHP--------------------YSVHVFQ 621
            +S QH +S++SKSICKII+LIEG++ T  V +                     Y VHVFQ
Sbjct: 594  TSKQHSQSNMSKSICKIIQLIEGIDPTPLVCNSAKVDVSKGKESLSPLGARADYFVHVFQ 653

Query: 622  WNPSELHAVLQKFVCACNDLLGGKADLDKFAEELSSALDWIMNNCIAHKDASRARNKVKK 681
            W   EL  VL++F+  C+ +L GK D + FAEE+S ALDWI+NNCI+ KD+S  R+K+K+
Sbjct: 654  WRSFELKNVLERFLHTCSAMLNGKVDPESFAEEVSCALDWILNNCISPKDSSSKRDKIKR 713

Query: 682  HF------------GLL----VESNEVHIPEEQSSASLQGQNVLSQSNLQEENRRLRDEL 725
            HF            G L    VE   + +P     AS   Q +    NLQ+EN+RL D+L
Sbjct: 714  HFSQNESQSESEAGGYLNHPQVEEKSLCLP---IIASSDDQKI---CNLQDENKRLNDKL 767

Query: 726  KSMAARLESATDRSEALVTQLHESEEQIGNLETEVKALKESKEMIEDQMENQKSINEDLD 785
            K+M  RL+SATD  E L  Q  ESE+ I +L+ E++  KESK M+EDQ+E+Q SINEDLD
Sbjct: 768  KNMECRLQSATDEIETLKMQYPESEQSIKSLQLELETTKESKRMLEDQIEHQNSINEDLD 827

Query: 786  TQLTVAKAKLNEGFQKFSSLEVELEYRNNFCEELEATCLELQLQLESVAKREPPSYGVNQ 845
            TQLTVAKAKLNE  Q+FS+LEVELE + N CEELEATCLELQLQLESVAK++  +Y VNQ
Sbjct: 828  TQLTVAKAKLNEVLQQFSALEVELEEKCNCCEELEATCLELQLQLESVAKKDSLNYSVNQ 887

Query: 846  GEKQSQNGWEMTAASIKLAECQETILNLGKQLKALASPREAVLFDKVFSTTNPAITATNN 905
               Q QNG E+TAAS+KLAECQETILNLGKQLKALA+PREA LFDKVF++T+   TAT N
Sbjct: 888  EGPQHQNGSEITAASLKLAECQETILNLGKQLKALATPREAALFDKVFNSTSSTTTATVN 947

Query: 906  RRLNQRFSLRDRMLADDSSKTDPFKSSNSKATLSIKDGPKPSLLHSDDCNGVDAPIVQVH 965
            + LN+RFSLRD+M A+DS+K    KS         KD   PS    ++ N    P V V 
Sbjct: 948  KNLNRRFSLRDQMKAEDSAKAIILKSPT-------KDSENPS----NNSNAQGTPNVLVR 996

Query: 966  TPEVHTALENKASNTAVGSSLAVVPSKKR-GVGLLLKLFLRRKKGSSKNSR 1015
            TPE     + KA NT VG +LA+VP KK+ GVG L +L +RRKKGSSK SR
Sbjct: 997  TPEAKDDPKQKAGNTLVGGALAIVPVKKQGGVGFLRRLLMRRKKGSSKKSR 1047

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225428861|ref|XP_002282435.1| PREDICTED: filament-like plant protein 7-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147791289|emb|CAN65607.1| hypothetical protein VITISV_042269 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356502511|ref|XP_003520062.1| PREDICTED: filament-like plant protein 7-like [Glycine max] Back     alignment and taxonomy information
>gi|356519723|ref|XP_003528519.1| PREDICTED: filament-like plant protein 7-like [Glycine max] Back     alignment and taxonomy information
>gi|359480795|ref|XP_002278328.2| PREDICTED: filament-like plant protein 7-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|357475279|ref|XP_003607925.1| Filament-like plant protein [Medicago truncatula] gi|355508980|gb|AES90122.1| Filament-like plant protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|255565282|ref|XP_002523633.1| Myosin-9, putative [Ricinus communis] gi|223537195|gb|EEF38828.1| Myosin-9, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147852602|emb|CAN79543.1| hypothetical protein VITISV_025322 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224084366|ref|XP_002307274.1| predicted protein [Populus trichocarpa] gi|222856723|gb|EEE94270.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1020
TAIR|locus:22049901054 AT1G47900 "AT1G47900" [Arabido 0.789 0.763 0.271 9.3e-68
TAIR|locus:2135154996 AT4G36120 "AT4G36120" [Arabido 0.794 0.813 0.266 5.2e-64
TAIR|locus:2824556982 AT1G19835 "AT1G19835" [Arabido 0.358 0.372 0.335 3.6e-61
TAIR|locus:2090684704 AT3G19370 [Arabidopsis thalian 0.491 0.711 0.309 3.1e-54
TAIR|locus:21529851586 CIP1 "COP1-interactive protein 0.837 0.538 0.211 1.2e-13
TAIR|locus:2045412 1333 AT2G32240 "AT2G32240" [Arabido 0.717 0.549 0.204 1.7e-08
UNIPROTKB|F1PLU81196 CGN "Cingulin" [Canis lupus fa 0.291 0.248 0.270 1.5e-12
UNIPROTKB|A7YH321190 CGN "Cingulin" [Canis lupus fa 0.291 0.249 0.270 3e-12
UNIPROTKB|E1BBS9 1984 CROCC "Uncharacterized protein 0.363 0.186 0.216 3.1e-12
UNIPROTKB|F1NGZ3 2417 F1NGZ3 "Uncharacterized protei 0.740 0.312 0.215 4.5e-12
TAIR|locus:2204990 AT1G47900 "AT1G47900" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 704 (252.9 bits), Expect = 9.3e-68, P = 9.3e-68
 Identities = 234/862 (27%), Positives = 419/862 (48%)

Query:    49 MKNLNEQLASVIFDCHPKDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDETLKPPLSA 108
             +++LNE+L+    +   K+ L+ + +K+ ++A +G EK +  A  +K  L+      L+A
Sbjct:   115 VEDLNEKLSVANEEIVTKEALVKQHSKVAEDAVSGWEKADAEALALKNTLESVTLSKLTA 174

Query:   109 NENLPYAGAATAPMKCVKQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERI 168
              +   +   A    +C++Q+   + + E ++HD  +  + + EK   E EK + +  + +
Sbjct:   175 EDRAAHLDGALK--ECMRQIRNLKKDHEVKLHDVALSKTKQIEKMTMEFEKRMCDYEQEL 232

Query:   169 AKLAAENSHLSKALLVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKENAFLKYEFRILE 228
              + AA++  LS+ L  +  M+  +S+ KS+A+AE  TL + L++ E+E   LKYE  ++ 
Sbjct:   233 LRSAADSDALSRTLQERSNMLVKVSEEKSRADAEIETLKSNLEMCEREIKSLKYEVHVVS 292

Query:   229 KELEIRNEEMEYTRRSVEATHKQHLESVKKVAKLEAECERLRLLVRKKLPGSAASAKMKS 288
             KELEIRNEE     RS E+ +KQHLE VKK+AKLEAEC+RLR LVRKKLPG AA A+MK 
Sbjct:   293 KELEIRNEEKNMCIRSAESANKQHLEGVKKIAKLEAECQRLRSLVRKKLPGPAALAQMKL 352

Query:   289 EVEXXXXXXXXXXXXKLSPTR----------------DLIVRHATTESSHDISLLARLHD 332
             EVE            K SP +                +  + +A      +  L  RL  
Sbjct:   353 EVENLGRDSGDARQ-KRSPVKVSSPCKSPGGYSSTGSEFSLDNAQKFQKENEFLTERLLA 411

Query:   333 MEKENRTLKDIVITKSTELQASRMMFSRTASRLSYVESQLREICTGQKSMELTGCVPISS 392
             ME+E + LK+ +  +++EL  SR + +++ S+L  +E+QL++  + + S+E+   +  S+
Sbjct:   412 MEEETKMLKEALAKRNSELLESRNLCAQSTSKLQSLEAQLQQNNSQKSSLEVCPNLNTSN 471

Query:   393 ELSIMSVDNASDDGMSSSGSWANALISE-LEHFRDGKIKNQLEHKGIEVSGMSLMDDFVE 451
               S +SV   S+DG   SGS + +L +   +  +  K    LE      S + LMDDF+E
Sbjct:   472 PSSSISV---SEDGNDDSGSCSGSLSTNPSQQIKKEKDMAALERVESVNSHVELMDDFLE 528

Query:   452 IEKLAIVSAETPSGSGYQSDVTSKELVPLVRSDSRLSEIKQEIHSKDVATEKSFDWLQVV 511
             +EKLA +    P+ S     + SK+     +S+  + +   ++   D  +     + +  
Sbjct:   529 MEKLACL----PNLSSSNGSIDSKDGSGDQKSEMVILDAHTDLEDSDRGSPAVMKF-RSR 583

Query:   512 LNAMLKQRQISKQS-LDKLLEDIRIALGYVNYPTXXXXXXXXXXTQPRESKSPNTSYIAH 570
             L+ +L+   +S  + + K++ DI+  L  VN               P E           
Sbjct:   584 LSKVLES--VSPDADIQKIVGDIKCILQDVN-ACMDQEKPSEVHVHPEEVSDLCPE---Q 637

Query:   571 SLPGDCRNGKERSSQHLESDLSKSICKIIELIEGVNVTSSVSHPYSVHVFQWNPSELHAV 630
             +L  DC    E+  Q +  DL  ++ +I + +  + + + V       + + N  +   +
Sbjct:   638 NLVEDCHLA-EQKLQSIHQDLKNAVSRIHDFV--LLLRNEVKAGQDTSI-EGN--DFVEL 691

Query:   631 LQKFVCACNDLLGGKADLDKFAEELSSALDWIMNNCIAHKD-ASRARNKVKKHFGLLVES 689
             ++ F    N +L G   LD F   L++  +  M   ++ +  AS     +       V  
Sbjct:   692 IEGFSVTFNHVLSGDKSLDDFVSNLANVFNEAMERKVSFRGLASSEVETLSPDCIDKVAL 751

Query:   690 NEVHIPEEQSSASL-QGQNVLSQSNLQ-EENR--------RLRDELKSMAARLESATDRS 739
              E  + ++ SS  + Q   V ++  +  +ENR        +L+ E++ + +  E      
Sbjct:   752 PESKVVDKDSSQEIYQNGCVHNEPGVPCDENRVSGYESDSKLQ-EIEELRSEKEKMAVDI 810

Query:   740 EALVTQLHESEEQIGNLETEVKALKESKEMIEDQMENQKSINEDLDTQLTVAKAKLNEGF 799
             E L  QL ESE+ + ++ ++  + + S  + + Q+         L+++    +  +N+  
Sbjct:   811 EGLKCQLQESEQLLADIRSQFDSAQRSNRLADTQLRCMTESYRSLESRAADLEIDVNQLK 870

Query:   800 QKFSSLEVELEYRNNFCEELEAT--CLELQLQLESVAKREPPSYGVNQGEKQSQNGWEMT 857
             +K   LE ELE  +  C   EA   C EL+  ++        +    + + +S+   E++
Sbjct:   871 EKIQKLENELE--DEKCNHQEAILRCHELEEHIQRHRNTSLVAEDDEEADIKSKQERELS 928

Query:   858 AASIKLAECQETILNLGKQLKA 879
             AA+ KLAECQETI  LGKQLK+
Sbjct:   929 AAAEKLAECQETIFVLGKQLKS 950
GO:0003674 "molecular_function" evidence=ND
GO:0005737 "cytoplasm" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2135154 AT4G36120 "AT4G36120" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2824556 AT1G19835 "AT1G19835" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090684 AT3G19370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152985 CIP1 "COP1-interactive protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045412 AT2G32240 "AT2G32240" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1PLU8 CGN "Cingulin" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|A7YH32 CGN "Cingulin" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1BBS9 CROCC "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1NGZ3 F1NGZ3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
grail3.0027007401
hypothetical protein (947 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1020
pfam05911767 pfam05911, DUF869, Plant protein of unknown functi 1e-137
TIGR021681179 TIGR02168, SMC_prok_B, chromosome segregation prot 1e-05
TIGR021681179 TIGR02168, SMC_prok_B, chromosome segregation prot 2e-05
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 2e-05
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 5e-05
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 6e-05
TIGR021691164 TIGR02169, SMC_prok_A, chromosome segregation prot 9e-05
COG11961163 COG1196, Smc, Chromosome segregation ATPases [Cell 1e-04
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 2e-04
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 2e-04
COG11961163 COG1196, Smc, Chromosome segregation ATPases [Cell 4e-04
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 5e-04
TIGR021681179 TIGR02168, SMC_prok_B, chromosome segregation prot 8e-04
COG11961163 COG1196, Smc, Chromosome segregation ATPases [Cell 8e-04
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 8e-04
TIGR02169 1164 TIGR02169, SMC_prok_A, chromosome segregation prot 0.001
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 0.001
TIGR021691164 TIGR02169, SMC_prok_A, chromosome segregation prot 0.002
TIGR02169 1164 TIGR02169, SMC_prok_A, chromosome segregation prot 0.002
TIGR02169 1164 TIGR02169, SMC_prok_A, chromosome segregation prot 0.002
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 0.002
PRK12704520 PRK12704, PRK12704, phosphodiesterase; Provisional 0.002
COG0419 908 COG0419, SbcC, ATPase involved in DNA repair [DNA 0.002
pfam06160559 pfam06160, EzrA, Septation ring formation regulato 0.002
COG11961163 COG1196, Smc, Chromosome segregation ATPases [Cell 0.003
>gnl|CDD|218806 pfam05911, DUF869, Plant protein of unknown function (DUF869) Back     alignment and domain information 
 Score =  430 bits (1108), Expect = e-137
 Identities = 298/832 (35%), Positives = 449/832 (53%), Gaps = 72/832 (8%)

Query: 66  KDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDETLKPPLSANENLPYAGAATAPMKCV 125
           K+ L+ + AK+ +EA +G EK E  AA +K++L++     L+A +   +   A    +C+
Sbjct: 1   KEALVKQHAKVAEEAVSGWEKAEAEAAALKQQLEDVTLKKLAAEDRASHLDGALK--ECM 58

Query: 126 KQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERIAKLAAENSHLSKALLVK 185
           +QL   + EQEQ++ DA  + + E+EK + ELEK L E  + +A+ AAEN  LS++L  K
Sbjct: 59  RQLRQVREEQEQKIQDAATEKTKEWEKVKAELEKKLLELQKELARAAAENDALSRSLQEK 118

Query: 186 EKMIEDLSKRKSQAEAEFSTLMTRLDVTEKENAFLKYEFRILEKELEIRNEEMEYTRRSV 245
            KMI +LS+ KS+AE+E   L  RL+  EKEN+ LKYE  +L KELEIRNEE   + +S 
Sbjct: 119 SKMIMELSEEKSRAESEIEDLKARLESAEKENSSLKYEVHVLSKELEIRNEERNMSLQSA 178

Query: 246 EATHKQHLESVKKVAKLEAECERLRLLVRKKLPGSAASAKMKSEVEMQGRDQMDMRRRKL 305
           +A  KQHLE VKK+AKLEAEC+RLR LVRK+LPG AA AKMK EVE  G + +D R R+ 
Sbjct: 179 DAASKQHLEGVKKIAKLEAECQRLRGLVRKRLPGPAALAKMKLEVESLGSNFVDNRSRR- 237

Query: 306 SPTRDLIVRHATTESSHDIS-----LLARLHDMEKENRTLKDIVITKSTELQASRMMFSR 360
           SP+      H++ ++          L ARL  ME EN+TLK+ +  +++ELQ SR M+++
Sbjct: 238 SPSPASSAFHSSPQNLQKAQKENEFLTARLLAMEDENKTLKEALSKRNSELQFSRNMYAK 297

Query: 361 TASRLSYVESQLREICTGQKSMELTGCVPISSELSIMSV-DNASDDGMSSSGSWANALIS 419
           TAS+LS +E+QL        S EL+     S+  S+ SV ++ +DD  S S SWA+ALIS
Sbjct: 298 TASKLSVLEAQLES--NRDVSTELSSSSNTSNPPSLTSVSEDGNDDEGSCSESWASALIS 355

Query: 420 ELEHFRDGKIKNQLEHKGIEVSGMSLMDDFVEIEKLAIVSAET-PSGSGYQSDVTSKELV 478
           ELE F+  K   +        S M LMDDF+E+EKLA++  E+   GS   S   S   V
Sbjct: 356 ELEQFKKEKGMGKSSKGTASSSEMELMDDFLEMEKLAMLPPESSADGSKVSSPKCSDSSV 415

Query: 479 PLVRSDSRLSEIKQEIHSKDVATEKSFDWLQVVLNAMLKQRQISKQSLDKLLEDIRIALG 538
            L         ++ ++  +        + LQ VL  ++++  IS+  + ++LEDI   L 
Sbjct: 416 ALTGPVEHEDNLESKLSDRLP------EVLQSVLKLVMEKHIISE--ISEILEDIEAELD 467

Query: 539 YVNYPTVVAADSVAASTQPRESKSPNTSYIAHSLPGDCRNGKERSSQHLESDLSKSICKI 598
            +            +S    E+       +  SL  +     ER SQ LE  +S+     
Sbjct: 468 SLE----------RSSNGDDEN---EEVAMVGSLVEESSAVIER-SQELEGAVSRI---- 509

Query: 599 IELIEGVNVTSSVSHPYSVHVFQWNPSELHAVLQKFVCACNDLLGGKADLDKFAEELSSA 658
                                     SE  +VL+  V  C DLL GKADL+KF +E S  
Sbjct: 510 --------------------------SEFTSVLEHEVTVCQDLLDGKADLEKFIQEFSLT 543

Query: 659 LDWIMNNCIAHKDASRARNKVKKHFGLLVESNEVHIPEEQSSASLQGQNVLSQSNLQEEN 718
           L+W++N   + +D S   +++KK+F  L  S       E+   S          +  EE 
Sbjct: 544 LEWVVNQEKSLQDVSVEASEIKKNFLGLKSS-------EKEINSPDEVKGAVCISTLEEL 596

Query: 719 RRLRDELKSMAARLESATDRSEALVTQLHESEEQIGNLETEVKALKESKEMIEDQMENQK 778
             L+ E +++   L    D  E    +L E+E+++  L++E+ A +ES  + E Q++   
Sbjct: 597 ETLKSEKENLDGELSKCKDDLEESKNKLQETEKKLEELKSELDASQESNSLAETQLKCMV 656

Query: 779 SINEDLDTQLTVAKAKLNEGFQKFSSLEVELEYRNNFCEELEATCLELQLQLESVAKREP 838
              E L+ +    +A+     +K SSLE ELE      +EL A C EL+ ++E  A++E 
Sbjct: 657 ESYESLELRAKDLEAEHKSLQEKISSLEDELEKERQNHQELIAKCRELEEKIER-AEQEE 715

Query: 839 PSYGVNQGEKQSQNGWEMTAASIKLAECQETILNLGKQLKALASPREAVLFD 890
               +++ E++ +   E+ AA+ KLAECQETIL+LGKQL++LA P E +L  
Sbjct: 716 NMQKLDEEEQKIKQEKEIAAAAEKLAECQETILSLGKQLQSLAPPEEFLLDS 767

This family consists of a number of sequences found in Arabidopsis thaliana, Oryza sativa and Lycopersicon esculentum (Tomato). The function of this family is unknown. Length = 767
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional Back     alignment and domain information
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|114855 pfam06160, EzrA, Septation ring formation regulator, EzrA Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1020
PF05911769 DUF869: Plant protein of unknown function (DUF869) 100.0
TIGR021691164 SMC_prok_A chromosome segregation protein SMC, pri 98.41
COG11961163 Smc Chromosome segregation ATPases [Cell division 98.27
TIGR021681179 SMC_prok_B chromosome segregation protein SMC, com 97.86
TIGR021691164 SMC_prok_A chromosome segregation protein SMC, pri 97.47
COG11961163 Smc Chromosome segregation ATPases [Cell division 96.86
PF05911769 DUF869: Plant protein of unknown function (DUF869) 96.8
KOG46741822 consensus Uncharacterized conserved coiled-coil pr 96.75
PRK09039343 hypothetical protein; Validated 96.75
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 96.67
TIGR021681179 SMC_prok_B chromosome segregation protein SMC, com 96.27
PF00261237 Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop 95.59
PF09726697 Macoilin: Transmembrane protein; InterPro: IPR0191 95.38
PF00261237 Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop 95.25
PRK02224880 chromosome segregation protein; Provisional 94.73
KOG0977546 consensus Nuclear envelope protein lamin, intermed 94.28
PF07888546 CALCOCO1: Calcium binding and coiled-coil domain ( 94.11
PF05557722 MAD: Mitotic checkpoint protein; InterPro: IPR0086 93.98
PF15254861 CCDC14: Coiled-coil domain-containing protein 14 93.67
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 93.55
PRK04778569 septation ring formation regulator EzrA; Provision 93.37
KOG09961293 consensus Structural maintenance of chromosome pro 93.26
PF12718143 Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 93.26
KOG06121317 consensus Rho-associated, coiled-coil containing p 93.12
KOG0996 1293 consensus Structural maintenance of chromosome pro 92.77
PF05701522 WEMBL: Weak chloroplast movement under blue light; 92.39
PF10473140 CENP-F_leu_zip: Leucine-rich repeats of kinetochor 92.3
KOG4593716 consensus Mitotic checkpoint protein MAD1 [Cell cy 92.29
PF12718143 Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 92.01
KOG0933 1174 consensus Structural maintenance of chromosome pro 91.22
PF121281201 DUF3584: Protein of unknown function (DUF3584); In 90.89
PRK11637428 AmiB activator; Provisional 90.56
PF00038312 Filament: Intermediate filament protein; InterPro: 89.93
PF04156191 IncA: IncA protein; InterPro: IPR007285 Chlamydia 89.93
PF13851201 GAS: Growth-arrest specific micro-tubule binding 89.77
PF15619194 Lebercilin: Ciliary protein causing Leber congenit 89.72
PHA02562562 46 endonuclease subunit; Provisional 89.4
PF05701522 WEMBL: Weak chloroplast movement under blue light; 89.35
PF07888546 CALCOCO1: Calcium binding and coiled-coil domain ( 89.28
KOG4673961 consensus Transcription factor TMF, TATA element m 89.27
PF08614194 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR 89.22
COG1579239 Zn-ribbon protein, possibly nucleic acid-binding [ 89.2
PRK04778569 septation ring formation regulator EzrA; Provision 89.2
PF04849306 HAP1_N: HAP1 N-terminal conserved region; InterPro 89.02
PF15070617 GOLGA2L5: Putative golgin subfamily A member 2-lik 88.8
PF09726697 Macoilin: Transmembrane protein; InterPro: IPR0191 88.79
PF08317325 Spc7: Spc7 kinetochore protein; InterPro: IPR01325 88.7
smart00787312 Spc7 Spc7 kinetochore protein. This domain is foun 88.68
KOG06121317 consensus Rho-associated, coiled-coil containing p 88.0
PF08317325 Spc7: Spc7 kinetochore protein; InterPro: IPR01325 87.66
TIGR01843423 type_I_hlyD type I secretion membrane fusion prote 87.54
PF12128 1201 DUF3584: Protein of unknown function (DUF3584); In 87.42
KOG0946970 consensus ER-Golgi vesicle-tethering protein p115 87.39
PRK11637428 AmiB activator; Provisional 87.08
KOG4673961 consensus Transcription factor TMF, TATA element m 87.05
PF08614194 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR 86.66
KOG4593716 consensus Mitotic checkpoint protein MAD1 [Cell cy 86.59
PF10174775 Cast: RIM-binding protein of the cytomatrix active 86.37
PRK04863 1486 mukB cell division protein MukB; Provisional 85.69
COG1579239 Zn-ribbon protein, possibly nucleic acid-binding [ 85.6
PF09787511 Golgin_A5: Golgin subfamily A member 5; InterPro: 85.46
PHA02562562 46 endonuclease subunit; Provisional 85.31
PF1232974 TMF_DNA_bd: TATA element modulatory factor 1 DNA b 85.24
PF14662193 CCDC155: Coiled-coil region of CCDC155 85.23
TIGR00606 1311 rad50 rad50. This family is based on the phylogeno 85.06
PF15070 617 GOLGA2L5: Putative golgin subfamily A member 2-lik 85.01
KOG1003205 consensus Actin filament-coating protein tropomyos 84.67
KOG0250 1074 consensus DNA repair protein RAD18 (SMC family pro 84.59
PRK04863 1486 mukB cell division protein MukB; Provisional 84.16
KOG4807593 consensus F-actin binding protein, regulates actin 83.5
PF01576859 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu 83.48
PF04156191 IncA: IncA protein; InterPro: IPR007285 Chlamydia 83.19
PF09730 717 BicD: Microtubule-associated protein Bicaudal-D; I 83.02
PF10186302 Atg14: UV radiation resistance protein and autopha 82.97
PRK09039343 hypothetical protein; Validated 82.93
PF03148384 Tektin: Tektin family; InterPro: IPR000435 Tektin 82.28
PF04849306 HAP1_N: HAP1 N-terminal conserved region; InterPro 82.25
KOG0288459 consensus WD40 repeat protein TipD [General functi 82.15
COG4942 420 Membrane-bound metallopeptidase [Cell division and 82.0
KOG0250 1074 consensus DNA repair protein RAD18 (SMC family pro 81.8
PRK10884206 SH3 domain-containing protein; Provisional 81.73
KOG0977 546 consensus Nuclear envelope protein lamin, intermed 81.66
KOG0976 1265 consensus Rho/Rac1-interacting serine/threonine ki 81.46
COG3883265 Uncharacterized protein conserved in bacteria [Fun 81.14
PF00038312 Filament: Intermediate filament protein; InterPro: 80.76
KOG0804493 consensus Cytoplasmic Zn-finger protein BRAP2 (BRC 80.68
PRK03918880 chromosome segregation protein; Provisional 80.49
PF05010207 TACC: Transforming acidic coiled-coil-containing p 80.02
>PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants Back     alignment and domain information 
Probab=100.00  E-value=1.3e-195  Score=1703.54  Aligned_cols=760  Identities=44%  Similarity=0.601  Sum_probs=668.7

Q ss_pred             chHHHHHHHHHHHhhhccCcchhhHHHHHHHHhhhhcCCCCcccCCCCCCCCCCChhHHHHHhhhhhhhhHHHHHHHHHH
Q 001727           66 KDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDETLKPPLSANENLPYAGAATAPMKCVKQLNFDQAEQEQRVHDAVVK  145 (1020)
Q Consensus        66 Kd~lvkqhaKvaeEAv~GwEKae~E~~~lK~qLe~~~~~~~~~e~rv~hld~A~~LKeCmrQLr~~rEEqEq~i~eav~~  145 (1020)
                      ||+|||||+|||||||+||||||+||++||+|||+++++++++||||+|||||  |||||||||++||||||+|||||++
T Consensus         1 k~~lvkqh~kvaeeav~gwekae~e~~~lk~~l~~~~~~~~~~e~r~~hld~a--Lkec~~qlr~~ree~eq~i~~~~~~   78 (769)
T PF05911_consen    1 KDDLVKQHAKVAEEAVSGWEKAEAEAASLKQQLEAATQQKLALEDRVSHLDGA--LKECMRQLRQVREEQEQKIHEAVAK   78 (769)
T ss_pred             CcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhhhHH--HHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999  9999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHHHHHHHHHHHHHHHHhhhhHhhHHHHHHhhhhhhHhhhhhhhhHHH
Q 001727          146 TSGEFEKAQKELEKNLREANERIAKLAAENSHLSKALLVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKENAFLKYEFR  225 (1020)
Q Consensus       146 ~s~e~ek~k~elE~kl~e~~~~l~~~~aEn~~Ls~al~~k~~~i~el~~~k~~ae~e~~~l~~rLe~~eKen~sLkyE~~  225 (1020)
                      +|+||+|+|.+||++|++++++|+++++||++|+++|++|+++|.+|+++|++|+++|++|++||+++||||++||||||
T Consensus        79 ~s~e~e~~~~~le~~l~e~~~~l~~~~~e~~~l~~~l~~~~~~i~~l~~~~~~~e~~~~~l~~~l~~~eken~~Lkye~~  158 (769)
T PF05911_consen   79 KSKEWEKIKSELEAKLAELSKRLAESAAENSALSKALQEKEKLIAELSEEKSQAEAEIEDLMARLESTEKENSSLKYELH  158 (769)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhhhhhhhhhhhHHHhhhhhhhhhHHHHhHHHHHHHHHHHhhhcCCCchHHHhhHHHHHhhccchhhhhcccC
Q 001727          226 ILEKELEIRNEEMEYTRRSVEATHKQHLESVKKVAKLEAECERLRLLVRKKLPGSAASAKMKSEVEMQGRDQMDMRRRKL  305 (1020)
Q Consensus       226 ~l~kELeiR~~Ere~~~~sae~a~KQhlEsvKKiakLEaECqRLR~lvRKklPgpAala~Mk~Eve~lg~d~~e~rrr~~  305 (1020)
                      |++|||||||+||||++||||+|||||||+|||||||||||||||+||||||||||||||||+||+++|||++++|||++
T Consensus       159 ~~~keleir~~E~~~~~~~ae~a~kqhle~vkkiakLEaEC~rLr~l~rk~lpgpaa~a~mk~ev~~~~~~~~~~r~r~~  238 (769)
T PF05911_consen  159 VLSKELEIRNEEREYSRRAAEAASKQHLESVKKIAKLEAECQRLRALVRKKLPGPAALAQMKNEVESLGRDSGENRRRRS  238 (769)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChHHHHHhHHHHHHhccccccccCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCCcccccccccCCCc----chhh-HHHHHHhhHHhHHHHHHHHhhhhhhhhHHHhhhhhhhhhhhHHHHHHHHhhccCc
Q 001727          306 SPTRDLIVRHATTESS----HDIS-LLARLHDMEKENRTLKDIVITKSTELQASRMMFSRTASRLSYVESQLREICTGQK  380 (1020)
Q Consensus       306 ~~~~~~~~~~~~~~~~----~~~~-lt~rL~~~EeEnk~LKe~Lakkn~ELQ~sr~m~a~taskLs~le~ql~~ls~~q~  380 (1020)
                      +++.+.+..+. ++++    .+++ ||+||++||||||||||+|++||+||||||+|||+|||||++||+|| +.+ +++
T Consensus       239 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~eeEnk~Lke~l~~k~~ELq~sr~~~a~ta~kL~~~e~ql-~~~-~~~  315 (769)
T PF05911_consen  239 PSRPSSPHDFS-PQNPQKRSKESEFLTERLQAMEEENKMLKEALAKKNSELQFSRNMYAKTASKLSQLEAQL-KSS-GQV  315 (769)
T ss_pred             CCccccccccc-ccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHh-hcc
Confidence            66533332221 3332    2366 99999999999999999999999999999999999999999999999 455 999


Q ss_pred             ccccccCCCCCCccccccc-cCCCCCCCCCccchhhhhhchhhhcccccccccCCCCccccccccccccHHHHHHHHHhc
Q 001727          381 SMELTGCVPISSELSIMSV-DNASDDGMSSSGSWANALISELEHFRDGKIKNQLEHKGIEVSGMSLMDDFVEIEKLAIVS  459 (1020)
Q Consensus       381 ~~e~~~~~~~s~~~sl~S~-d~~~dd~~s~s~SWAsaLisEld~fk~~K~~~~~~~~s~~~sdi~LMDDFlEMEKLA~~s  459 (1020)
                      ++|+++|+|++||+|++|| |+|+||++||+|||||||||||||||++|.++++++++++++||+|||||||||||||+|
T Consensus       316 ~~e~~~s~~~~~~~s~~s~se~~~dd~~s~s~SWAsaLiseldqfk~~k~~~~~~~~~~~~~~i~LMDDFlEmEkLA~~s  395 (769)
T PF05911_consen  316 SMELSSSQNTSNPPSLTSMSEDGNDDEGSCSDSWASALISELDQFKNEKVISRSSSKTISSSDIDLMDDFLEMEKLAALS  395 (769)
T ss_pred             ccccccccCCCCCCchhcccccCCCCCCcccchhHHHHhchHHHhccccccccccccCCccccHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999 999999999999999999999999999999998888999889999999999999999999


Q ss_pred             cCCCCCCCCCcc-cccCccccccccccchhhhhhhhccc-ccccccchhHHHHHHHHHHhhhhhccccHHHHHHHHHHHh
Q 001727          460 AETPSGSGYQSD-VTSKELVPLVRSDSRLSEIKQEIHSK-DVATEKSFDWLQVVLNAMLKQRQISKQSLDKLLEDIRIAL  537 (1020)
Q Consensus       460 ~~~~~~~g~~s~-~~g~elv~v~~~~s~~~~~~~e~~s~-d~~s~~~~~wLq~~l~~v~~~~~~~~~~~~~ILe~Ir~AL  537 (1020)
                      ++++.++++++. +.+...+.+..+.      +.+.... ++..+++|+|||++++.|+++|++++++  .||++|+.|+
T Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~wLqsv~k~v~~q~~~s~i~--~ILedI~~al  467 (769)
T PF05911_consen  396 RDSSSPSSCSSSEVDSDSSVTLESSS------KRESVLESDKLSDRIPEWLQSVLKLVLEQKEVSKIS--EILEDIEIAL  467 (769)
T ss_pred             CCCCCCCCCCCccccccccccccccc------cccccccchhhcccccHHHHHHHHHHHHHHHhhhHH--HHHHHHHHHH
Confidence            987744444331 2222222222111      1122222 4678999999999999999999999999  9999999999


Q ss_pred             cccCCCccccccccccccCCCCCCCCCccccccCCCCCccCCccccchhhhhhhHHHHHHHHHHHhhccccccCCCCCce
Q 001727          538 GYVNYPTVVAADSVAASTQPRESKSPNTSYIAHSLPGDCRNGKERSSQHLESDLSKSICKIIELIEGVNVTSSVSHPYSV  617 (1020)
Q Consensus       538 ~~i~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dls~si~kI~~lie~~~~~~~~~~~~~v  617 (1020)
                      ++++++..+..+..              .|.                           .....+++.+..+.....+.  
T Consensus       468 ~~~~~~~~~~~~~~--------------~~~---------------------------~~~~sL~e~~~s~~~~s~eL--  504 (769)
T PF05911_consen  468 DSINNSSNCDDDSE--------------EYE---------------------------SMEASLVEESKSMIEISQEL--  504 (769)
T ss_pred             Hhhccccccccccc--------------hhh---------------------------hhhhhHHHHHHHHHhhcccH--
Confidence            99988855444322              110                           01111222222221111111  


Q ss_pred             eecccCchhHHHHHHHHHHHhhhhcCCcccHHHHHHHHHHHHHHHHhhhccccchhhhHHHHhhhcCCcccccccccccc
Q 001727          618 HVFQWNPSELHAVLQKFVCACNDLLGGKADLDKFAEELSSALDWIMNNCIAHKDASRARNKVKKHFGLLVESNEVHIPEE  697 (1020)
Q Consensus       618 ~~fq~k~sEL~~~Le~f~~~C~dvL~gka~le~f~~EL~~~L~wi~n~~~s~~d~s~~~d~i~k~f~~~~~~dkv~l~e~  697 (1020)
                      .++.++.++|..+|++|+|+|+||++|++++++|+.|+|.+|+||+++||+++|+..+++.|+.+|.|..+...-.-.. 
T Consensus       505 ~~avskIsEfv~~LekeVh~C~DLLsgkadLE~fieE~s~tLdwIls~~~SLqDv~s~~sEIK~~f~~~ss~e~E~~~~-  583 (769)
T PF05911_consen  505 NVAVSKISEFVLVLEKEVHVCQDLLSGKADLERFIEEFSLTLDWILSNCFSLQDVSSMRSEIKKNFDGDSSSEAEINSE-  583 (769)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHhhhhcccccccccch-
Confidence            1223444888999999999999999999999999999999999999999999999999999999999986531111000 


Q ss_pred             cccccccCcccccccccHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHhhhh
Q 001727          698 QSSASLQGQNVLSQSNLQEENRRLRDELKSMAARLESATDRSEALVTQLHESEEQIGNLETEVKALKESKEMIEDQMENQ  777 (1020)
Q Consensus       698 k~~c~~~~~~~~~q~~~~eE~e~Lk~ek~~le~~L~~~~~~~E~~~~ql~E~E~~i~~LqsEL~~~keS~~l~E~Qle~~  777 (1020)
                            +..+........++++.|+.++.+|++.|++|++++|.++.||+|+|+.|.+|+++|.++++|++++|+||+||
T Consensus       584 ------dea~~~~~~el~eelE~le~eK~~Le~~L~~~~d~lE~~~~qL~E~E~~L~eLq~eL~~~keS~s~~E~ql~~~  657 (769)
T PF05911_consen  584 ------DEADTSEKKELEEELEKLESEKEELEMELASCQDQLESLKNQLKESEQKLEELQSELESAKESNSLAETQLKAM  657 (769)
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  00111134567899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhHhHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhHHHHHHHHHHHHHhhhhccCCCCCCCCCccccccchhhhHH
Q 001727          778 KSINEDLDTQLTVAKAKLNEGFQKFSSLEVELEYRNNFCEELEATCLELQLQLESVAKREPPSYGVNQGEKQSQNGWEMT  857 (1020)
Q Consensus       778 ~~~~~~Let~L~~~e~E~~el~~Ki~sLE~ELe~e~~~~eEl~AkC~ELqeQLer~~~~~~~~~~~~~e~~~~k~e~EIa  857 (1020)
                      +.+|+++++++..+++|++.++.||++||+||+++|++|+|+++||++||+||+|++.+...... .+++++++||||||
T Consensus       658 ~e~~e~le~~~~~~e~E~~~l~~Ki~~Le~Ele~er~~~~e~~~kc~~Le~el~r~~~~~~~~~~-~~~~~k~kqe~Eia  736 (769)
T PF05911_consen  658 KESYESLETRLKDLEAEAEELQSKISSLEEELEKERALSEELEAKCRELEEELERMKKEESLQQL-ANEDKKIKQEKEIA  736 (769)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHhhhcccchhhc-cccccccchHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999986655444 49999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHHHHhhccCCccccccc
Q 001727          858 AASIKLAECQETILNLGKQLKALASPREAVLFD  890 (1020)
Q Consensus       858 aAAeKLAECQETI~nLGKQLKALa~p~e~~lfD  890 (1020)
                      +||+|||||||||+|||||||||+||. ++++|
T Consensus       737 aAA~KLAECQeTI~sLGkQLksLa~~~-d~~~d  768 (769)
T PF05911_consen  737 AAAEKLAECQETIASLGKQLKSLATPE-DFLLD  768 (769)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCChh-hhhcc
Confidence            999999999999999999999999877 44554

The function of this family is unknown.
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants Back     alignment and domain information
>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] Back     alignment and domain information
>PRK09039 hypothetical protein; Validated Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information
>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes Back     alignment and domain information
>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>PRK02224 chromosome segregation protein; Provisional Back     alignment and domain information
>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] Back     alignment and domain information
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) Back     alignment and domain information
>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins Back     alignment and domain information
>PF15254 CCDC14: Coiled-coil domain-containing protein 14 Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information
>PRK04778 septation ring formation regulator EzrA; Provisional Back     alignment and domain information
>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function Back     alignment and domain information
>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] Back     alignment and domain information
>KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope Back     alignment and domain information
>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion Back     alignment and domain information
>PF13851 GAS: Growth-arrest specific micro-tubule binding Back     alignment and domain information
>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease Back     alignment and domain information
>PHA02562 46 endonuclease subunit; Provisional Back     alignment and domain information
>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function Back     alignment and domain information
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) Back     alignment and domain information
>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] Back     alignment and domain information
>PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells Back     alignment and domain information
>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] Back     alignment and domain information
>PRK04778 septation ring formation regulator EzrA; Provisional Back     alignment and domain information
>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues Back     alignment and domain information
>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 Back     alignment and domain information
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes Back     alignment and domain information
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] Back     alignment and domain information
>smart00787 Spc7 Spc7 kinetochore protein Back     alignment and domain information
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] Back     alignment and domain information
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] Back     alignment and domain information
>TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family Back     alignment and domain information
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins Back     alignment and domain information
>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] Back     alignment and domain information
>PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells Back     alignment and domain information
>KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] Back     alignment and domain information
>PRK04863 mukB cell division protein MukB; Provisional Back     alignment and domain information
>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] Back     alignment and domain information
>PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure Back     alignment and domain information
>PHA02562 46 endonuclease subunit; Provisional Back     alignment and domain information
>PF12329 TMF_DNA_bd: TATA element modulatory factor 1 DNA binding; InterPro: IPR022092 This is the middle region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes that contains at its N-terminal section a number of leucine zippers that could potentially form coiled coil structures Back     alignment and domain information
>PF14662 CCDC155: Coiled-coil region of CCDC155 Back     alignment and domain information
>TIGR00606 rad50 rad50 Back     alignment and domain information
>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 Back     alignment and domain information
>KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] Back     alignment and domain information
>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] Back     alignment and domain information
>PRK04863 mukB cell division protein MukB; Provisional Back     alignment and domain information
>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton] Back     alignment and domain information
>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril Back     alignment and domain information
>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion Back     alignment and domain information
>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] Back     alignment and domain information
>PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking Back     alignment and domain information
>PRK09039 hypothetical protein; Validated Back     alignment and domain information
>PF03148 Tektin: Tektin family; InterPro: IPR000435 Tektin heteropolymers form unique protofilaments of flagellar microtubules [] Back     alignment and domain information
>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues Back     alignment and domain information
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only] Back     alignment and domain information
>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] Back     alignment and domain information
>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] Back     alignment and domain information
>PRK10884 SH3 domain-containing protein; Provisional Back     alignment and domain information
>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] Back     alignment and domain information
>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] Back     alignment and domain information
>COG3883 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope Back     alignment and domain information
>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] Back     alignment and domain information
>PRK03918 chromosome segregation protein; Provisional Back     alignment and domain information
>PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1020
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-12
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 7e-11
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 1e-09
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 8e-09
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 5e-08
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 1e-07
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 7e-07
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 9e-07
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 3e-09
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 5e-08
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 2e-05
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 2e-05
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 2e-05
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 3e-05
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 7e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 77.6 bits (190), Expect = 1e-14
 Identities = 96/643 (14%), Positives = 210/643 (32%), Gaps = 154/643 (23%)

Query: 127 QLNFDQAEQEQRVHDAVVKTSGEFEKAQ--KELEKNLREA--NERIAKLAAENSHLSKAL 182
            ++F+  E + +  D +      F      K+++   +     E I  +      +S  L
Sbjct: 6   HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTL 65

Query: 183 LVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKENAFL----KYEFRILEKELEIRNEEM 238
            +   +   LSK++   + +F       +V      FL    K E R       +  E+ 
Sbjct: 66  RLFWTL---LSKQEEMVQ-KFVE-----EVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR 116

Query: 239 EYTRRSVEATHKQHLESVKKVAKLEAECERLR---LLVRKKLPGS-----AASAKMKSEV 290
           +      +   K ++  ++   KL      LR    ++   + GS     A    +  +V
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV 176

Query: 291 EMQGRDQ---MDMRRRK-----LSPTRDL---IVRHATTESSHDISLLARLHDMEKENRT 339
           + +   +   ++++        L   + L   I  + T+ S H  ++  R+H ++ E R 
Sbjct: 177 QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR 236

Query: 340 L-----------------------------KDIVITKSTELQASRMMFSRTASRL----- 365
           L                             K ++ T+  ++       + T   L     
Sbjct: 237 LLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 366 SYVESQLREI---CTGQKSMEL----TGCVPISSELSIMSVDNAS-DDGMSSSGSWANAL 417
           +    +++ +       +  +L        P    LSI++    S  DG+++  +W +  
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRR--LSIIA---ESIRDGLATWDNWKHVN 351

Query: 418 ISELEHFRDGKIKNQLEHKGIEVSGMSLMDDFVEIEKLAIVSAETPSGSGYQSDVTSKEL 477
             +L    +  + N LE    E   M     F   ++L++              + +  L
Sbjct: 352 CDKLTTIIESSL-NVLEPA--EYRKM-----F---DRLSVFPPSAH--------IPTILL 392

Query: 478 VPL----VRSDSRLSEIKQEIHSKDVATEKSFDWLQVVLNAM---LKQRQISKQSL-DKL 529
             +    ++SD     +  ++H   +  EK      + + ++   LK +  ++ +L   +
Sbjct: 393 SLIWFDVIKSDVM--VVVNKLHKYSLV-EKQPKESTISIPSIYLELKVKLENEYALHRSI 449

Query: 530 LEDIRIALGYVNYPTVVAADSVAASTQPRESKSPNT------SYIAHSLPGDCRNGKERS 583
           ++   I   +                   +   P        S+I H L       +   
Sbjct: 450 VDHYNIPKTF-----------------DSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL 492

Query: 584 SQHLESDLS--KSICKIIELIEGVNVTSSVSH------PYSVHVFQWNP--SELHAVLQK 633
            + +  D    +   KI       N + S+ +       Y  ++   +P    L   +  
Sbjct: 493 FRMVFLDFRFLEQ--KIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILD 550

Query: 634 FVCACN-DLLGGK-ADLDKFAEELSSALDWIMNNCIAHKDASR 674
           F+     +L+  K  DL + A  L +  + I     AHK   R
Sbjct: 551 FLPKIEENLICSKYTDLLRIA--LMAEDEAIFEE--AHKQVQR 589
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00