Citrus Sinensis ID: 001831

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------101
MELLPAEGSQIAKKHGFRSLKLVSFDLNEELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFSTIDDLKNIVLKIKNLEEKNISPWDEENIPEEIVSTKPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVSRFKFLRSLFRHNQTYHLGDAKALAAVAGLTFLAFSLWRYSRRTLKS
ccccccccHHHHHHHHHHHHHHHcccccccccccccccEEEEEccccEEEEEEccccccEEEEEEEEEccccccccccccHHHHHHHHcccccccccccHHHHHHHHHccccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccccccccHHHHccccHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEccccEEEEEEccccccEEEEEEEEcccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHcccEEEEEEEcccEEEEEEEcccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccHHHHHcccHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEEEcccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEcccccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccEEEEEEccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcc
ccccccccHHHHHHHHHHHHHHHcccccccccccccccEEEEEcccEEEEEEcccccccEEEEEEEEEccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHcccEEccccccEcccccEEEEEEcccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccccccccccHHHHHcccHHHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEcccccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHHHHHHHHHcccccEEEEEEccccccccccHHHHHHHHHHHHHcccccccccccccHHHHcccccccEEEEEcccccccEEEEEcccEEEEEEcccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccEEEEEEEccccEcEEcccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccHHHHHcccHHHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHccccccccccccccHHccccccccccccEEEEEEcccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEccccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccHHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
mellpaegsqiakkhgfrslKLVSFDlneelgeqpfgvdygrldngLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELfvpvdkpelLSRAISVLAEFstevrvskdDLEKERGAVLEEYrgnrnasgrmqDAHWVLMMEGskyaeclpiGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIavgdfpdtkGVVELINTHfgqkksatdppvipkfpvpshqeprfscfieseaggsaVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFklsrrkdppyfscsasaddLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHflckepiiGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCviktiepqtfstiDDLKNIVLKIKNLeeknispwdeenipeeivstkpspgnivqqfeyenlGATELVLSNgmrvcykctdflddqvlftgfsygglselpeseylscsmgstiageigvfgyrpsmLMDMLAGKRVEGGTKVGAYMRtfsgdcspsdLETALQLVYQLFttnvapgeEEVEIVMQMAEEVIRaqerdpytAFANRVkeinygnsyffrpirisdlqkvdplkacdyfnscfkdpstfTVVIVgnidpsngipLILQylggipkppepilhfnrdnlkglpftfpssiirevvrspmveaqcsvqlcfpvelkngtmvEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFlggnkhsrtgdvrgdisinfscdpeisFKLVDLALDEISRLqkegpsdedvSTILELEQRAHETGLQENYHWLDRILCSyqsrvysgdvgtsfkiQDEARSKVRKSLQPLTLQLALQrimpypcnkqfTVVILMPQVSRFKFLRSLFRHNQTYHLGDAKALAAVAGLTFLAFSLWRYSRRTLKS
mellpaegsqiakkhgfrSLKLVSFDLNEELGeqpfgvdygrldNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLaefstevrvskddlekergavleeyrgnrnasgrMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHfgqkksatdppVIPKFPVPSHQEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKtiepqtfstiddLKNIVLKIKNleeknispwdeenIPEEIVSTKPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDPEISFKLVDLALDEISRLqkegpsdedvSTILELEQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVSRFKFLRSLFRHNQTYHLGDAKALAAVAGLTFLAFSLWRYSRRTLKS
MELLPAEGSQIAKKHGFRSLKLVSFDLNEELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFSTIDDLKNIVLKIKNLEEKNISPWDEENIPEEIVSTKPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVSRFKFLRSLFRHNQTYHLGDAKALAAVAGLTFLAFSLWRYSRRTLKS
***************GFRSLKLVSFDLNEELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVR***************************QDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFG**********************RFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERD*MQSTNLRDECLQHFLCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFSTIDDLKNIVLKIKNLEEKNISPW*****************NIVQQFEYENLGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDPEISFKLVDLALDEI****************L*L***AHETGLQENYHWLDRILCSYQSRVYSGDVGTSFKIQD*****VRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVSRFKFLRSLFRHNQTYHLGDAKALAAVAGLTFLAFSLWRYS******
*************KHGFRSLKLVSFDLNEELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQK***************SHQEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLE*DQMQSTNLRDECLQHFLCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTF***DDLKNIVLKIKNLEEKNISPWDEENIPEEIVST***************LGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQ***************AFANRVKEINYGNSYFFRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNR*********F***IIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVS*******************AKALAAVAGLTFLAFSLWRYSRRT***
********SQIAKKHGFRSLKLVSFDLNEELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFSTIDDLKNIVLKIKNLEEKNISPWDEENIPEEIVSTKPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDPEISFKLVDLALDEISRL*********VSTILELEQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVSRFKFLRSLFRHNQTYHLGDAKALAAVAGLTFLAFSLWRYSRRTLKS
*ELLPAEGSQIAKKHGFRSLKLVSFDLNEELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFSTIDDLKNIVLKIKNLEEKNISPWDEENIPEEIVSTKPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVSRFKFLRSLFRHNQTYHLGDAKALAAVAGLTFLAFSLWRYSRR****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
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SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooo
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MELLPAEGSQIAKKHGFRSLKLVSFDLNEELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFSTIDDLKNIVLKIKNLEEKNISPWDEENIPEEIVSTKPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVSRFKFLRSLFRHNQTYHLGDAKALAAVAGLTFLAFSLWRYSRRTLKS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1008 2.2.26 [Sep-21-2011]
P45181926 Probable zinc protease Pq yes no 0.787 0.857 0.248 3e-61
P31828931 Probable zinc protease Pq N/A no 0.794 0.860 0.239 1e-53
O86835459 Uncharacterized zinc prot yes no 0.213 0.468 0.269 1e-11
P37648498 Protein YhjJ OS=Escherich N/A no 0.216 0.437 0.239 4e-11
P50335495 Protein YhjJ OS=Salmonell yes no 0.401 0.818 0.235 7e-11
Q8Z286495 Protein YhjJ OS=Salmonell N/A no 0.401 0.818 0.235 8e-11
P31800480 Cytochrome b-c1 complex s yes no 0.207 0.435 0.248 6e-10
Q9Y8B5466 Mitochondrial-processing N/A no 0.236 0.510 0.260 7e-10
P0A5S9438 Uncharacterized zinc prot yes no 0.194 0.447 0.269 1e-09
P0A5S8438 Uncharacterized zinc prot yes no 0.194 0.447 0.269 1e-09
>sp|P45181|PQQL_HAEIN Probable zinc protease PqqL OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=pqqL PE=3 SV=1 Back     alignment and function desciption
 Score =  237 bits (605), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 210/846 (24%), Positives = 381/846 (45%), Gaps = 52/846 (6%)

Query: 35  PF--GVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSA 92
           PF   + +G+L NGL Y+V  N++P+ R  + L + AGS+ E++ ++G+AH+VEH+AF+ 
Sbjct: 29  PFDPNIQHGKLSNGLQYFVLKNTEPKERVYIRLVINAGSMHEDDDQKGIAHLVEHMAFNG 88

Query: 93  TEKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTE 152
           ++KY  + II  LE +G +F    NA T  + TVY L +  +  + L  A  V+ E+   
Sbjct: 89  SKKYPENQIINALEKLGMKFARDINAFTDFENTVYTLNLDSNNQQKLELAFDVINEWMNN 148

Query: 153 VRVSKDDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSS 212
           +     D++ ERG V EE+R   +   R+ +    + M GS+Y    PIG   +I+T+S+
Sbjct: 149 ITFLPKDVDGERGVVQEEWRRRLSPMLRIGNKKSAIEMAGSRYVLRDPIGDMDIIKTISA 208

Query: 213 DTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIP-KFPVPSHQ 271
             V  FY KWYR  NM+VI VGD  DTK VV+L+  +  Q+   T   +    F +P   
Sbjct: 209 KRVADFYHKWYRPDNMSVIIVGDI-DTKQVVKLLKQNLSQENPITKTTLEKIDFNIPLIN 267

Query: 272 EPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDP 331
           + R     E      ++ +S+     E  T+  YK+ L + +    LN R  +  +  + 
Sbjct: 268 KWRLDSISEQGTTIPSIELSFFENTIETNTLASYKQELIQQITTRLLNLRLQQWEKETEN 327

Query: 332 PYFSCSASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVS--VAR 389
              S +     L +     I S    +    K ++ +   +A ++  GF++ E+S  + R
Sbjct: 328 GVDSANFYRTHLGKETLQSIFSLQLIDTQYSKTIDKLFAFIASIKQQGFTQNELSGEIKR 387

Query: 390 ALLMSEVESAYLERDQMQSTNLR--DECLQHFLCKEPIIGIEYEARLQKTLLPHISALEV 447
              ++E      ++  ++S +L+  D+ +     K+ ++ +     L K  L  I+  ++
Sbjct: 388 LTQLNE------KQLNIRSGSLKIADDLITSVANKQVVLSVNDRYELNKRFLSQITLADL 441

Query: 448 SRYSEKLQTSCSCVIKTIEPQTFSTID-DLKNIVLKIKNLEEKNISPWDEENIPEEIVST 506
            R   +     + ++   +P     +  D+  I  +  N+ E     WDE+   E++   
Sbjct: 442 QRTLNQTLALKAKLLLITQPLPQKALPFDVAEIETRWNNVMEMQQHQWDEKKQIEKLPHL 501

Query: 507 KPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYL 566
             + G++ Q+  ++     E  LSNG ++ Y  +D   +QV F   + GGL  +P  +Y 
Sbjct: 502 TFNTGSLSQEKYWDRGDIYEFRLSNGSKLIYHYSDKTPNQVHFRAVTQGGLRSIPNKDYH 561

Query: 567 SCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLV 626
                 ++  E GV     S +  + +   +   T +    + F+G   P DLE  L L 
Sbjct: 562 LLRAAVSVVDETGVGELSLSAVNQIFSRDPLVIATVIDDDKQGFTGVSKPKDLENLLTLF 621

Query: 627 YQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPY------TAFANRVKEINYGNSYFFRP 680
                   +P       +  +A E  R + RD +      T F   V ++ + N      
Sbjct: 622 R--LKLRSSP-------ISDLALEKYRRETRDYFKQIDLETQFMQAVSKLRFPNIETVYT 672

Query: 681 IRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPIL 740
            + +     D  +  + +     D + FT  I+G+I+ +    L  +YL  I    + I 
Sbjct: 673 QKQAQQLSFDKNQLNNAYQHYILDKTDFTYFIIGDIELNQVKKLAERYLASIESKTQ-IR 731

Query: 741 HFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKL 800
           HF       +P T   +  +  + + + E +  V++    +  N    E+      L+ +
Sbjct: 732 HF-------VP-TIIHTPTQSFIMNGLKEPRADVEIYLTAD--NTWRTEQKYLFNILADI 781

Query: 801 LETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDP----EISFKLVD 856
           ++ K+  +LR K   IYS + S F+   +      + G   I FSCDP    E+++ L +
Sbjct: 782 VQEKLRLILREKVSGIYSVN-SWFM---QDVYAPQIEG--KIEFSCDPKRVEELTY-LTN 834

Query: 857 LALDEI 862
             LD+I
Sbjct: 835 QVLDDI 840

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: -
>sp|P31828|PQQL_ECOLI Probable zinc protease PqqL OS=Escherichia coli (strain K12) GN=pqqL PE=3 SV=2 Back     alignment and function description
>sp|O86835|Y5738_STRCO Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=SCO5738 PE=3 SV=1 Back     alignment and function description
>sp|P37648|YHJJ_ECOLI Protein YhjJ OS=Escherichia coli (strain K12) GN=yhjJ PE=1 SV=1 Back     alignment and function description
>sp|P50335|YHJJ_SALTY Protein YhjJ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=yhjJ PE=3 SV=2 Back     alignment and function description
>sp|Q8Z286|YHJJ_SALTI Protein YhjJ OS=Salmonella typhi GN=yhjJ PE=3 SV=1 Back     alignment and function description
>sp|P31800|QCR1_BOVIN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus GN=UQCRC1 PE=1 SV=2 Back     alignment and function description
>sp|Q9Y8B5|MPPB_LENED Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes GN=mppB PE=3 SV=1 Back     alignment and function description
>sp|P0A5S9|Y2805_MYCBO Uncharacterized zinc protease Mb2805c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2805c PE=3 SV=1 Back     alignment and function description
>sp|P0A5S8|Y2782_MYCTU Uncharacterized zinc protease Rv2782c/MT2852 OS=Mycobacterium tuberculosis GN=Rv2782c PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1008
2977387091009 unnamed protein product [Vitis vinifera] 1.0 0.999 0.806 0.0
255546225981 Mitochondrial-processing peptidase subun 0.972 0.998 0.790 0.0
147840663981 hypothetical protein VITISV_007878 [Viti 0.972 0.998 0.785 0.0
225445003957 PREDICTED: probable zinc protease pqqL-l 0.948 0.998 0.765 0.0
449446815979 PREDICTED: probable zinc protease PqqL-l 0.964 0.992 0.761 0.0
356511403967 PREDICTED: probable zinc protease pqqL-l 0.943 0.983 0.747 0.0
15241924956 Insulinase (Peptidase family M16) protei 0.944 0.995 0.719 0.0
297796557957 peptidase M16 family protein [Arabidopsi 0.944 0.994 0.718 0.0
356523679964 PREDICTED: probable zinc protease pqqL-l 0.943 0.986 0.735 0.0
449488161927 PREDICTED: LOW QUALITY PROTEIN: probable 0.895 0.974 0.761 0.0
>gi|297738709|emb|CBI27954.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1718 bits (4449), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 814/1009 (80%), Positives = 919/1009 (91%), Gaps = 1/1009 (0%)

Query: 1    MELLPAEGSQIAKKHGFRSLKLVSFDLNEELGEQPFGVDYGRLDNGLFYYVRCNSKPRMR 60
            M+LLPAE  QIAK+HGFRSLKL++ D+++ LG++PFGVDYGRL+NGL YYVR NSKP+MR
Sbjct: 1    MDLLPAEIPQIAKRHGFRSLKLLNVDMDQALGDEPFGVDYGRLENGLHYYVRSNSKPKMR 60

Query: 61   AALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVT 120
            AALALAVKAGSVLEEE ERGVAHIVEHLAFSAT+KYTNHDI+KFLES+GAEFGACQNAVT
Sbjct: 61   AALALAVKAGSVLEEEDERGVAHIVEHLAFSATKKYTNHDIVKFLESVGAEFGACQNAVT 120

Query: 121  SADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASGR 180
            S+D+TVYELFVPVDKPELLS+AISVLAEFS+EVRVS DDLEKERGAV+EEYRGNRNA+GR
Sbjct: 121  SSDDTVYELFVPVDKPELLSQAISVLAEFSSEVRVSTDDLEKERGAVMEEYRGNRNANGR 180

Query: 181  MQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTK 240
            MQDAHWVLMMEGSKYA+ LPIGLEKVIRTV S+ VK+FY+KWY L NMAVIAVGDF DT+
Sbjct: 181  MQDAHWVLMMEGSKYADRLPIGLEKVIRTVPSEVVKQFYRKWYHLHNMAVIAVGDFSDTQ 240

Query: 241  GVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFIESEAGGSAVIVSYKMPVNELK 300
             VVELI THFG K SA DP  IP FPVPSH+EPRFSCF+ESEA GSAV++SYKM V+ELK
Sbjct: 241  SVVELIRTHFGPKSSAHDPLPIPHFPVPSHEEPRFSCFVESEAAGSAVMISYKMSVDELK 300

Query: 301  TIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIMSSSCKERG 360
            T+KDYK++LTESMFL+ALNQR FK+SRRKDPPYFSCSA+AD LVRP+KAY+++SSCKE+ 
Sbjct: 301  TVKDYKDLLTESMFLYALNQRLFKISRRKDPPYFSCSAAADVLVRPVKAYMITSSCKEKC 360

Query: 361  TLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFL 420
            T++ALESMLIEVAR+RLHGFSERE+SV RALLMSEVESAYLERDQMQS++LRDE LQHFL
Sbjct: 361  TIEALESMLIEVARIRLHGFSEREISVVRALLMSEVESAYLERDQMQSSSLRDEYLQHFL 420

Query: 421  CKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFSTIDDLKNIV 480
              EP++GIEYEA+LQKT+LP ISA E+S+YSEKLQTSCSCVIKT+EP   +T+DDLK +V
Sbjct: 421  RNEPVVGIEYEAQLQKTILPQISASEISKYSEKLQTSCSCVIKTMEPWATATVDDLKAVV 480

Query: 481  LKIKNLEEK-NISPWDEENIPEEIVSTKPSPGNIVQQFEYENLGATELVLSNGMRVCYKC 539
             KI +LEE+ +ISPWD+E+IPEEIVS KP+PGNIVQ+ E+ N+  TEL+LSNGMRVCYKC
Sbjct: 481  SKINSLEEEGSISPWDDEHIPEEIVSIKPNPGNIVQELEFSNIEVTELILSNGMRVCYKC 540

Query: 540  TDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEG 599
            TDF DDQVLFTGFSYGGLSELPE+EY SCSMGSTIAGEIGVFGY+PS+LMDMLAGKR E 
Sbjct: 541  TDFFDDQVLFTGFSYGGLSELPENEYFSCSMGSTIAGEIGVFGYKPSVLMDMLAGKRAEV 600

Query: 600  GTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDP 659
            GTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNV PGEEEV+IVMQMAEE + AQERDP
Sbjct: 601  GTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVKPGEEEVKIVMQMAEEAVHAQERDP 660

Query: 660  YTAFANRVKEINYGNSYFFRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPS 719
            YTAFANRV+E+NYGNSYFFRPIRISDL+KVDPLKAC YFN+CFKDPSTFTVVIVGNIDP+
Sbjct: 661  YTAFANRVRELNYGNSYFFRPIRISDLRKVDPLKACQYFNNCFKDPSTFTVVIVGNIDPA 720

Query: 720  NGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFP 779
               PLILQYLGGIPKPPEPILHFNRD+L+GLPFTFP+++IREVVRSPMVEAQCSVQLCFP
Sbjct: 721  IAGPLILQYLGGIPKPPEPILHFNRDDLRGLPFTFPATVIREVVRSPMVEAQCSVQLCFP 780

Query: 780  VELKNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGD 839
            VELKN TM++EI++VGFLSKLLETK+MQVLRFKHGQIYSA VSVFLGGNK SRTGD+RGD
Sbjct: 781  VELKNETMMQEIHFVGFLSKLLETKIMQVLRFKHGQIYSAGVSVFLGGNKPSRTGDIRGD 840

Query: 840  ISINFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQENYHWLDR 899
            ISINFSCDP+IS  LVD+ALDEI R+Q+EG SDEDVST+LE+EQRAHE GLQENY+WLDR
Sbjct: 841  ISINFSCDPDISSTLVDIALDEILRVQEEGCSDEDVSTVLEIEQRAHENGLQENYYWLDR 900

Query: 900  ILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMP 959
            IL SYQSRVY GDVGTSF++QDE RSKVR+ L P T QLAL+RI+P+PC KQ+TVVILMP
Sbjct: 901  ILRSYQSRVYFGDVGTSFEVQDEGRSKVRELLTPSTAQLALKRILPFPCKKQYTVVILMP 960

Query: 960  QVSRFKFLRSLFRHNQTYHLGDAKALAAVAGLTFLAFSLWRYSRRTLKS 1008
            Q SR K L SLF+     +   AK L  VAGLT  A +LWRYSRRTLKS
Sbjct: 961  QTSRVKLLTSLFKSTDNSYSRKAKILVGVAGLTVFALTLWRYSRRTLKS 1009

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255546225|ref|XP_002514172.1| Mitochondrial-processing peptidase subunit beta, mitochondrial precursor, putative [Ricinus communis] gi|223546628|gb|EEF48126.1| Mitochondrial-processing peptidase subunit beta, mitochondrial precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147840663|emb|CAN62001.1| hypothetical protein VITISV_007878 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225445003|ref|XP_002282963.1| PREDICTED: probable zinc protease pqqL-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449446815|ref|XP_004141166.1| PREDICTED: probable zinc protease PqqL-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356511403|ref|XP_003524416.1| PREDICTED: probable zinc protease pqqL-like [Glycine max] Back     alignment and taxonomy information
>gi|15241924|ref|NP_200484.1| Insulinase (Peptidase family M16) protein [Arabidopsis thaliana] gi|10176777|dbj|BAB09891.1| zinc protease PQQL-like protein [Arabidopsis thaliana] gi|332009418|gb|AED96801.1| Insulinase (Peptidase family M16) protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297796557|ref|XP_002866163.1| peptidase M16 family protein [Arabidopsis lyrata subsp. lyrata] gi|297311998|gb|EFH42422.1| peptidase M16 family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356523679|ref|XP_003530463.1| PREDICTED: probable zinc protease pqqL-like [Glycine max] Back     alignment and taxonomy information
>gi|449488161|ref|XP_004157955.1| PREDICTED: LOW QUALITY PROTEIN: probable zinc protease PqqL-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1008
TAIR|locus:2165081956 AT5G56730 [Arabidopsis thalian 0.384 0.405 0.740 8.2e-307
UNIPROTKB|P31828931 pqqL "putative zinc peptidase" 0.807 0.874 0.241 1.2e-50
UNIPROTKB|Q9KRD3922 VC_1709 "Zinc protease, insuli 0.665 0.727 0.217 6.4e-36
TIGR_CMR|VC_1709922 VC_1709 "zinc protease, insuli 0.665 0.727 0.217 6.4e-36
TIGR_CMR|SO_4022943 SO_4022 "peptidase, M16 family 0.749 0.800 0.203 4.5e-28
TAIR|locus:2162336 1265 SPP "stromal processing peptid 0.233 0.185 0.301 3.3e-24
TIGR_CMR|CJE_0896416 CJE_0896 "peptidase, M16 famil 0.238 0.576 0.274 1.6e-12
TIGR_CMR|CBU_1902459 CBU_1902 "peptidase, M16 famil 0.247 0.542 0.267 1.7e-11
TIGR_CMR|CHY_1148409 CHY_1148 "peptidase, M16 famil 0.202 0.498 0.276 2.4e-11
UNIPROTKB|P37648498 yhjJ "predicted zinc-dependent 0.390 0.791 0.233 2.9e-11
TAIR|locus:2165081 AT5G56730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1535 (545.4 bits), Expect = 8.2e-307, Sum P(2) = 8.2e-307
 Identities = 288/389 (74%), Positives = 338/389 (86%)

Query:   617 SDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSY 676
             +DLETALQLVYQLFTTNV P EEEV IVMQMAEE +RA+ERDPYT FANRVKE+NYGNSY
Sbjct:   568 ADLETALQLVYQLFTTNVMPQEEEVGIVMQMAEESVRARERDPYTVFANRVKELNYGNSY 627

Query:   677 FFRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPP 736
             FFRPIRIS+L+KVDPLKAC+YFNSCF+DPSTFTVVIVGN+DP+  +PLILQYLGGIPKPP
Sbjct:   628 FFRPIRISELRKVDPLKACEYFNSCFRDPSTFTVVIVGNLDPTIALPLILQYLGGIPKPP 687

Query:   737 EPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGF 796
             +P+L+FNRD+LKGLPFTFP+ I +E VRSPMVEAQCSVQLCFPV+L NGTM+EEI+ +GF
Sbjct:   688 QPVLNFNRDDLKGLPFTFPTKITKEFVRSPMVEAQCSVQLCFPVQLTNGTMIEEIHCIGF 747

Query:   797 LSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDPEISFKLVD 856
             L KLLETK++Q LRF+HGQIYSA VSVFLGGNK SRT D+RGDIS+NFSCDPEIS KLVD
Sbjct:   748 LGKLLETKIIQFLRFEHGQIYSAEVSVFLGGNKPSRTADLRGDISVNFSCDPEISSKLVD 807

Query:   857 LALDEISRLQKEGPSDEDVSTILELEQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTS 916
             LAL+EI RLQKEGPS ED+S ILE+EQRAHE G+QENY+WLDRI+  YQSRVY+GD+G S
Sbjct:   808 LALEEIVRLQKEGPSQEDISAILEIEQRAHENGMQENYYWLDRIIRGYQSRVYAGDLGAS 867

Query:   917 FKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVSRFKFLRSLFR-HNQ 975
              KI +E R ++R+SL P T Q ALQRI+P+PC KQ+T VILMPQ SRF FL S+F   ++
Sbjct:   868 CKILEEGRLRMRESLAPQTAQAALQRILPHPCKKQYTAVILMPQRSRFGFLSSIFSSRSE 927

Query:   976 TYHLGDAKALAAVAGLTFLAFSLWRYSRR 1004
               ++ D K LA +AGL  + F +WRYSR+
Sbjct:   928 GPYIRDTKILAGIAGLGVVVFGIWRYSRK 956
GO:0003824 "catalytic activity" evidence=IEA
GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0009536 "plastid" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
UNIPROTKB|P31828 pqqL "putative zinc peptidase" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KRD3 VC_1709 "Zinc protease, insulinase family" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_1709 VC_1709 "zinc protease, insulinase family" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|SO_4022 SO_4022 "peptidase, M16 family" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TAIR|locus:2162336 SPP "stromal processing peptidase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_0896 CJE_0896 "peptidase, M16 family" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_1902 CBU_1902 "peptidase, M16 family" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1148 CHY_1148 "peptidase, M16 family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
UNIPROTKB|P37648 yhjJ "predicted zinc-dependent peptidase" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.240.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00016610001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (985 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1008
COG0612438 COG0612, PqqL, Predicted Zn-dependent peptidases [ 2e-44
pfam00675149 pfam00675, Peptidase_M16, Insulinase (Peptidase fa 9e-21
pfam05193182 pfam05193, Peptidase_M16_C, Peptidase M16 inactive 9e-16
pfam05193182 pfam05193, Peptidase_M16_C, Peptidase M16 inactive 1e-14
COG1025937 COG1025, Ptr, Secreted/periplasmic Zn-dependent pe 1e-11
COG0612438 COG0612, PqqL, Predicted Zn-dependent peptidases [ 9e-10
COG1026978 COG1026, COG1026, Predicted Zn-dependent peptidase 5e-06
TIGR02110696 TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis 6e-05
PRK15101961 PRK15101, PRK15101, protease3; Provisional 3e-04
>gnl|CDD|223685 COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information 
 Score =  166 bits (422), Expect = 2e-44
 Identities = 104/402 (25%), Positives = 172/402 (42%), Gaps = 17/402 (4%)

Query: 41  GRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHD 100
             L NGL      N       +L + VKAGS  E   + G+AH +EH+AF  T    + +
Sbjct: 20  FTLPNGLRVITYPNPTAP-TVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPSAE 78

Query: 101 IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDL 160
           + +  E +G +     NA TS D TVY L      P+ L +A+ +LA+        ++++
Sbjct: 79  LAEAFEKLGGQL----NAFTSFDYTVYYL---SVLPDNLDKALDLLADILLNPTFDEEEV 131

Query: 161 EKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQ 220
           E+E+G +LEE R  ++    +     +  + G+       +G E+ I  ++ + +K FYQ
Sbjct: 132 EREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGTEESIEAITREDLKDFYQ 191

Query: 221 KWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFIE 280
           KWY+  NM ++ VGD  D + VVELI  +FG    A  PP IP  P P   E        
Sbjct: 192 KWYQPDNMVLVVVGDV-DAEEVVELIEKYFGDLPGAAPPPKIPPEP-PLGPERVVRVNDP 249

Query: 281 SEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQ-RFFKLSRRKDPPYFSCSAS 339
            +       ++   P  +  +  DY  +L  +  L      R F+  R K    +S S+ 
Sbjct: 250 EQPDLEQAWLALGYPGPDYDSPDDYAALLLLNGLLGGGFSSRLFQELREKRGLAYSVSSF 309

Query: 340 ADDLVRPLKAYIMSSSCKERG--TLKALESMLIEVARVRLHGFSEREVSVARALLMSEVE 397
           +D L       I + +  E    T + +E +L  + +     F+E E+  A+ LL+  + 
Sbjct: 310 SDFLSDSGLFSIYAGTAPENPEKTAELVEEILKALKKGLKGPFTEEELDAAKQLLIGLL- 368

Query: 398 SAYLERDQMQSTNLRDECLQHFLCKEPIIGIEYEARLQKTLL 439
                        L  + L        +   E   R++   L
Sbjct: 369 -LLSLDSPSSIAELLGQYLLLGGSLITL--EELLERIEAVTL 407

Length = 438
>gnl|CDD|216056 pfam00675, Peptidase_M16, Insulinase (Peptidase family M16) Back     alignment and domain information
>gnl|CDD|218490 pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain Back     alignment and domain information
>gnl|CDD|218490 pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain Back     alignment and domain information
>gnl|CDD|223956 COG1025, Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|223685 COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>gnl|CDD|223957 COG1026, COG1026, Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information
>gnl|CDD|233732 TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information
>gnl|CDD|185056 PRK15101, PRK15101, protease3; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1008
PRK15101961 protease3; Provisional 100.0
PTZ004321119 falcilysin; Provisional 100.0
COG1025937 Ptr Secreted/periplasmic Zn-dependent peptidases, 100.0
COG1026978 Predicted Zn-dependent peptidases, insulinase-like 100.0
KOG0959974 consensus N-arginine dibasic convertase NRD1 and r 100.0
KOG2019998 consensus Metalloendoprotease HMP1 (insulinase sup 100.0
KOG0960467 consensus Mitochondrial processing peptidase, beta 100.0
COG0612438 PqqL Predicted Zn-dependent peptidases [General fu 100.0
TIGR02110696 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe 100.0
KOG2067472 consensus Mitochondrial processing peptidase, alph 100.0
KOG09611022 consensus Predicted Zn2+-dependent endopeptidase, 100.0
COG0612438 PqqL Predicted Zn-dependent peptidases [General fu 100.0
KOG0960467 consensus Mitochondrial processing peptidase, beta 100.0
TIGR02110 696 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe 100.0
KOG2067472 consensus Mitochondrial processing peptidase, alph 100.0
PRK15101 961 protease3; Provisional 100.0
PTZ00432 1119 falcilysin; Provisional 99.97
KOG2583429 consensus Ubiquinol cytochrome c reductase, subuni 99.95
COG1025 937 Ptr Secreted/periplasmic Zn-dependent peptidases, 99.94
KOG0959 974 consensus N-arginine dibasic convertase NRD1 and r 99.91
COG1026 978 Predicted Zn-dependent peptidases, insulinase-like 99.89
PF00675149 Peptidase_M16: Insulinase (Peptidase family M16) T 99.87
PF05193184 Peptidase_M16_C: Peptidase M16 inactive domain; In 99.86
KOG2583429 consensus Ubiquinol cytochrome c reductase, subuni 99.83
PF05193184 Peptidase_M16_C: Peptidase M16 inactive domain; In 99.79
KOG2019 998 consensus Metalloendoprotease HMP1 (insulinase sup 99.78
KOG0961 1022 consensus Predicted Zn2+-dependent endopeptidase, 99.75
PF00675149 Peptidase_M16: Insulinase (Peptidase family M16) T 99.66
PF08367248 M16C_assoc: Peptidase M16C associated; InterPro: I 98.29
PF03410590 Peptidase_M44: Protein G1; InterPro: IPR005072 In 98.28
PHA03081595 putative metalloprotease; Provisional 98.2
PF03410 590 Peptidase_M44: Protein G1; InterPro: IPR005072 In 97.02
PHA03081 595 putative metalloprotease; Provisional 96.79
PF08367248 M16C_assoc: Peptidase M16C associated; InterPro: I 94.66
>PRK15101 protease3; Provisional Back     alignment and domain information 
Probab=100.00  E-value=8e-78  Score=750.80  Aligned_cols=858  Identities=14%  Similarity=0.135  Sum_probs=619.7

Q ss_pred             ccCCCCCCcEEEEcCCCcEEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHccCCCCCCCh-hhHHHHHHHc
Q 001831           30 ELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTN-HDIIKFLESI  108 (1008)
Q Consensus        30 ~~~~~~~~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~-~~~~~~l~~~  108 (1008)
                      ..+.|+..++..+|+|||+|++++++... .++++|+|++||++||++..|+|||+|||+|+||++||. .++.++++++
T Consensus        36 k~~~d~~~~~~~~L~NGL~v~l~~~~~~~-~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l~~~  114 (961)
T PRK15101         36 KSEKDPRQYQAIRLDNGMTVLLVSDPQAV-KSLAALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFLKKH  114 (961)
T ss_pred             CCCCCccceEEEEeCCCCEEEEEeCCCCc-ceeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHHHHh
Confidence            34556677999999999999999988643 689999999999999999999999999999999999984 6899999999


Q ss_pred             ccccCCCccccccCCeEEEEEECCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCCC-chhhhHHHHHH
Q 001831          109 GAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRN-ASGRMQDAHWV  187 (1008)
Q Consensus       109 g~~~g~~~na~T~~d~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~~~~er~~v~~e~~~~~~-~~~~~~~~~~~  187 (1008)
                      |+.    .||+|+.|+|+|++++++   ++++.+|++++|++.+|.|+++++++||++|.+|++...+ +..++.+.+.+
T Consensus       115 Gg~----~NA~T~~d~T~y~~~~~~---~~l~~aL~~~ad~~~~P~f~~~~~erE~~~v~~E~~~~~~~~~~~~~~~~~~  187 (961)
T PRK15101        115 GGS----HNASTASYRTAFYLEVEN---DALPPAVDRLADAIAEPLLDPKNADRERNAVNAELTMARSRDGMRMAQVSAE  187 (961)
T ss_pred             CCC----ccceECCCceEEEEEcCH---HHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHh
Confidence            755    599999999999999995   4599999999999999999999999999999999997765 45566777788


Q ss_pred             HHhcCCCCCccCCCCCHHHhcCC----CHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHHhhcCCCCCCCCCCCC
Q 001831          188 LMMEGSKYAECLPIGLEKVIRTV----SSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIP  263 (1008)
Q Consensus       188 ~~~~~~p~~~~~~~g~~~~i~~i----t~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~  263 (1008)
                      .+|++|||+ ++.+|+.++|+++    ++++|++||++||+|+||+|+|+||+ ++++++++++++|+.|++...+.+..
T Consensus       188 ~~~~~hp~~-~~~~G~~etl~~~~~~~~~~~L~~f~~~~Y~p~nm~lvv~G~~-~~~~l~~~~~~~F~~~~~~~~~~~~~  265 (961)
T PRK15101        188 TINPAHPGS-RFSGGNLETLSDKPGSKLQDALVDFYQRYYSANLMKAVIYSNQ-PLPELAKLAADTFGRVPNKNASVPEI  265 (961)
T ss_pred             hCCCCCCcc-cCCCCCHHHhhcCCchHHHHHHHHHHHHhCcccceEEEEEcCC-CHHHHHHHHHHHhccCCCCCCCCCCC
Confidence            999999999 9999999999997    69999999999999999999999999 99999999999999998754322111


Q ss_pred             CCCCCCCCCCceEEEecCCCCceEEEEEEEcCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeeeeeccCc-
Q 001831          264 KFPVPSHQEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADD-  342 (1008)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~g~~~~~~~~~~~-  342 (1008)
                      ..++.........+...+..++..+.+.|+.|... .........++..+|++...++|+..++ ++|++|+++++... 
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~p~~~-~~~~~~~~~~l~~ll~~~~~g~l~~~L~-~~gla~~v~s~~~~~  343 (961)
T PRK15101        266 TVPVVTDAQKGIIIHYVPAQPRKVLRVEFRIDNNS-AKFRSKTDEYISYLIGNRSPGTLSDWLQ-KQGLAEGISAGADPM  343 (961)
T ss_pred             CCCCCCHHHcCeEEEEEECCCCcEEEEEEecCCcH-HHHhhCHHHHHHHHhcCCCCCcHHHHHH-HcCccceeeeccccc
Confidence            11111111112222333446678899999987642 1122234668888988876677887775 78999999987653 


Q ss_pred             ccccccEEEEEEEecCC---cHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHh
Q 001831          343 LVRPLKAYIMSSSCKER---GTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHF  419 (1008)
Q Consensus       343 ~~~~~~~~~i~~~~~~~---~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (1008)
                      ...+.|.|.+.+.+.++   +.+++++.++++|++++++|++++|++++|+.+..++..  .+.  ....+.+..+...+
T Consensus       344 ~~~~~g~f~i~~~~~~~~~~~~~~v~~~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~~--~~~--~~~~~~~~~~~~~~  419 (961)
T PRK15101        344 VDRNSGVFAISVSLTDKGLAQRDQVVAAIFSYLNLLREKGIDKSYFDELAHVLDLDFRY--PSI--TRDMDYIEWLADTM  419 (961)
T ss_pred             cCCCceEEEEEEEcChHHHHhHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhccccC--CCC--CChHHHHHHHHHHh
Confidence            23567899999998885   788999999999999999999999999999998776532  111  12233344444443


Q ss_pred             hcCCCccCHHHHHHHHHHHcCCCCHHHHHHHHHHhcccCCeEEEEeCCCCCCCHH-----------HHH-HHHHHHHhhh
Q 001831          420 LCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFSTID-----------DLK-NIVLKIKNLE  487 (1008)
Q Consensus       420 ~~~~~~~~~~~~~~~~~~~i~~it~edv~~~~~~~l~~~~~~~~~~~p~~~~~~~-----------~~~-~~~~~~~~~~  487 (1008)
                       .+.+.   .. .......++.+++++|+++++. |.++++.+++++|+...+.+           ++. +++++|....
T Consensus       420 -~~~~~---~~-~l~~~~~~~~~~~~~i~~~~~~-l~~~n~~i~~~~~~~~~~~~~~~~~~~Y~~~~i~~~~~~~~~~~~  493 (961)
T PRK15101        420 -LRVPV---EH-TLDAPYIADRYDPKAIKARLAE-MTPQNARIWYISPQEPHNKTAYFVDAPYQVDKISEQTFADWQQKA  493 (961)
T ss_pred             -hhCCH---HH-heeCchhhhcCCHHHHHHHHhh-cCHhHEEEEEEeCCCCCCccccccCCcceeecCCHHHHHHHhcCC
Confidence             22221   11 1111245888999999999877 88999999999887542211           221 2334443211


Q ss_pred             c-cCCC-CCCcCCCccccccCCCCCCceeEeEEecCCCeEEEEecCCcEEEEEecCC---CCCeEEEEEEecCc-CCCCC
Q 001831          488 E-KNIS-PWDEENIPEEIVSTKPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTDF---LDDQVLFTGFSYGG-LSELP  561 (1008)
Q Consensus       488 ~-~~i~-~~~~~~~p~~l~~~~~~~~~i~~~~~~~~~~~~~~~L~NGl~v~~~~~~~---~~~~v~~~~~~~gg-~~~~~  561 (1008)
                      . ..+. |...+.+|..+        .+.... .....++.+.++||++||+++++.   .| .+.+.+.+.++ ..+.+
T Consensus       494 ~~~~l~lP~~n~fip~~~--------~~~~~~-~~~~~p~~i~~~~g~~vw~~~d~~f~~~P-k~~i~~~~~~~~~~~~~  563 (961)
T PRK15101        494 QNIALSLPELNPYIPDDF--------SLIKAD-KAYKHPELIVDEPGLRVVYMPSQYFADEP-KADISLVLRNPKAMDSA  563 (961)
T ss_pred             CCccCCCCCCCCccCCCC--------eeccCC-CCCCCCeEEEcCCCeEEEEeCCCccccCC-CEEEEEEEeCCCccCCH
Confidence            1 1111 00001122221        111000 011234788999999999999973   34 47777755444 44455


Q ss_pred             cchhhhhchhHHHhhhcCCCCCCHHHHHHHHcCceEEEEEEecceeEEEEEecChhhHHHHHHHHHHHhccCCCCCHHHH
Q 001831          562 ESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEV  641 (1008)
Q Consensus       562 ~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~  641 (1008)
                      ...+++.++..++.       .+..++....+..|.+++.+ +.+.+.+++++++++++.+|+++.+.+.+|.+ ++++|
T Consensus       564 ~~~~l~~L~~~ll~-------~~l~e~~y~a~~aG~~~~~~-~~~g~~i~v~g~s~~l~~ll~~l~d~l~~~~~-~~~~f  634 (961)
T PRK15101        564 RNQVLFALNDYLAG-------LALDQLSNQASVGGISFSTN-ANNGLMVNANGYTQRLPQLLQALLEGYFSFTP-TEEQL  634 (961)
T ss_pred             HHHHHHHHHHHHHH-------HHHHHHhchHHhcCcEEEEc-cCCCEEEEEEecChhHHHHHHHHHHHHhcCCC-CHHHH
Confidence            67788877766652       22334445555678888888 78999999999999999999999999999988 89999


Q ss_pred             HHHHHHHHHHHHHhhcChHHHHHHHHHH-HhcCCCCcCCCC-ChhhhhcCChhHHHHHHhhhhCCCCCcEEEEEecCCcc
Q 001831          642 EIVMQMAEEVIRAQERDPYTAFANRVKE-INYGNSYFFRPI-RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPS  719 (1008)
Q Consensus       642 ~~~k~~~~~e~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~-~~~~i~~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~  719 (1008)
                      +++|+++++++++...+  ..+...+.. ..|..|||+... +.+.|+++|.+++++||++ ++.+.|++++|+||++.+
T Consensus       635 e~~k~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~py~~~~~~~~~l~~it~edl~~f~~~-~~~~~~~~~~v~GNi~~~  711 (961)
T PRK15101        635 AQAKSWYREQLDSAEKG--KAYEQAIMPAQMLSQVPYFERDERRKLLPSITLKDVLAYRDA-LLSGATPEFLVVGNLTEE  711 (961)
T ss_pred             HHHHHHHHHHHhhhccc--CcHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHH-HHHhceEEEEEEcCCCHH
Confidence            99999999999987653  112222221 345688888534 8999999999999999996 668999999999999999


Q ss_pred             chHHHHHHhhccCCCCCCCCCccccCCCCCCCcCCCCccceeEEeCCCCCcceEEEEEe-eccCCCCcchHhHHHHHHHH
Q 001831          720 NGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCF-PVELKNGTMVEEINYVGFLS  798 (1008)
Q Consensus       720 ~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~~~~L~  798 (1008)
                      ++.++++++++.++..+....       ....+..+.+.. ..+.......+..+.+.+ .....   .....+++.+|+
T Consensus       712 ea~~l~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~v~~~lLg  780 (961)
T PRK15101        712 QVTTLARDVQKQLGADGTEWW-------RGKDVVVDKKQS-VNFEKAGSSTDSALAAVYVPTGYD---EYQSSAYSSLLG  780 (961)
T ss_pred             HHHHHHHHHHHHhccCCcccc-------cccceEeCCCCe-EEEecCCCCCCCeEEEEEEeCCCC---CHHHHHHHHHHH
Confidence            999999999988875322110       000011111111 112222222333344434 22221   245567788999


Q ss_pred             HHHHHHHHHHHhhhcCCeeeeeeeeeccCCCCCCCCCcceeEEEEEEe---CcccHHHHHHHHHHHHHHHHhCCCCHHHH
Q 001831          799 KLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSC---DPEISFKLVDLALDEISRLQKEGPSDEDV  875 (1008)
Q Consensus       799 ~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i~~~~---~~~~~~~~~~~~~~~l~~i~~~~is~~el  875 (1008)
                      +++++|||.+||+++||+|+|+++.....        +.+.+.+.+++   +|+.+.+.++.+.+++....+ ++|++||
T Consensus       781 ~~~ssrlf~~LRtk~qLgY~V~s~~~~~~--------~~~~~~~~vqs~~~~~~~l~~~i~~f~~~~~~~l~-~lt~eE~  851 (961)
T PRK15101        781 QIIQPWFYNQLRTEEQLGYAVFAFPMSVG--------RQWGMGFLLQSNDKQPAYLWQRYQAFFPQAEAKLR-AMKPEEF  851 (961)
T ss_pred             HHHhHHHHHHHHHHhhhceEEEEEeeccC--------CeeeEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH-hCCHHHH
Confidence            99999999999999999999999876432        34445555543   466677777777777543334 7999999


Q ss_pred             HHHHHHHHHHHHhhccchHHHHHHHHHhhccccccCCCCcchhhchhhHHHHHhcCCHHHHHHHHHHh-cCCCCCCc-eE
Q 001831          876 STILELEQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRI-MPYPCNKQ-FT  953 (1008)
Q Consensus       876 ~~ak~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~-l~~~~~~~-~~  953 (1008)
                      +++|+.++.++....++....+.++...+..  ...+++..     +.+.+.|++||++||++++++| +.+   ++ ..
T Consensus       852 ~~~k~~l~~~~~~~~~sl~~~a~~~~~~i~~--~~~~fd~~-----~~~~~~i~~vT~edv~~~~~~~~~~~---~~~~~  921 (961)
T PRK15101        852 AQYQQALINQLLQAPQTLGEEASRLSKDFDR--GNMRFDSR-----DKIIAQIKLLTPQKLADFFHQAVIEP---QGLAI  921 (961)
T ss_pred             HHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc--CCCCcChH-----HHHHHHHHcCCHHHHHHHHHHHhcCC---CCCEE
Confidence            9999999999998887776665555443321  12244443     7789999999999999999998 666   55 34


Q ss_pred             EEEEecCc
Q 001831          954 VVILMPQV  961 (1008)
Q Consensus       954 ~~i~~p~~  961 (1008)
                      ++.+++..
T Consensus       922 ~~~~~~~~  929 (961)
T PRK15101        922 LSQISGSQ  929 (961)
T ss_pred             EEEeeccC
Confidence            45555543

>PTZ00432 falcilysin; Provisional Back     alignment and domain information
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK15101 protease3; Provisional Back     alignment and domain information
>PTZ00432 falcilysin; Provisional Back     alignment and domain information
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion] Back     alignment and domain information
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification Back     alignment and domain information
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion] Back     alignment and domain information
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification Back     alignment and domain information
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PHA03081 putative metalloprotease; Provisional Back     alignment and domain information
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PHA03081 putative metalloprotease; Provisional Back     alignment and domain information
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1008
3go9_A492 Predicted Insulinase Family Protease From Yersinia 4e-14
1sqb_A480 Crystal Structure Analysis Of Bovine Bc1 With Azoxy 4e-11
1bgy_A446 Cytochrome Bc1 Complex From Bovine Length = 446 4e-11
1qcr_A446 Crystal Structure Of Bovine Mitochondrial Cytochrom 4e-11
1bcc_A446 Cytochrome Bc1 Complex From Chicken Length = 446 2e-09
3cwb_A446 Chicken Cytochrome Bc1 Complex Inhibited By An Iodi 6e-09
3hdi_A421 Crystal Structure Of Bacillus Halodurans Metallo Pe 8e-09
3ami_A445 The Crystal Structure Of The M16b Metallopeptidase 3e-08
3amj_C437 The Crystal Structure Of The Heterodimer Of M16b Pe 3e-08
1hr6_B443 Yeast Mitochondrial Processing Peptidase Length = 4 1e-07
1hr7_B443 Yeast Mitochondrial Processing Peptidase Beta-E73q 3e-07
1q2l_A939 Crystal Structure Of Pitrilysin Length = 939 2e-06
3eoq_A406 The Crystal Structure Of Putative Zinc Protease Bet 1e-04
>pdb|3GO9|A Chain A, Predicted Insulinase Family Protease From Yersinia Pestis Length = 492 Back     alignment and structure 
Iteration: 1

 Score = 77.4 bits (189), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 119/282 (42%), Gaps = 14/282 (4%)
Query: 41  GRLDNGLFYYVRCN-SKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNH 99
           G+LDNG  + +     +P  R  L L V  GS+ E   E G AH++  LA  ++  +T  
Sbjct: 29  GKLDNGFSWQLLATPQRPSDRIELRLIVNTGSLSENTQEVGFAHLLPRLALXSSASFTPA 88
Query: 100 DIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDD 159
            +    +           A+TS D T+Y L +P ++P+LL  A++ L++ +  + VS+  
Sbjct: 89  QLQSLWQQGIDNERPLPPAITSYDFTLYSLSLPNNRPDLLKDALAWLSDTAGNLAVSEQT 148
Query: 160 LEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFY 219
           +        +           +Q+  W   ++GS      P   + V + V  + +K+FY
Sbjct: 149 VNAALNTATDPI---ATFPQNIQEPWWRYRLKGSSLIGHDPG--QPVTQPVDVEKLKQFY 203
Query: 220 QKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFI 279
           Q+WY      +  VG+  D++ +   I+  F + K     P       P   EP      
Sbjct: 204 QQWYTPDAXTLYVVGNV-DSRSIAAQISKAFSELKGKRTAPAAVATLAPLPPEP--VSLX 260
Query: 280 ESEAGGSAVIVSYKM---PVNELKTIKDY--KEMLTESMFLH 316
             +A    + + +     P+ +   +  Y   ++  E++F H
Sbjct: 261 NEQAAQDTLSLXWDTPWHPIQDSXALSRYWRSDLAREALFWH 302
>pdb|1SQB|A Chain A, Crystal Structure Analysis Of Bovine Bc1 With Azoxystrobin Length = 480 Back     alignment and structure
>pdb|1BGY|A Chain A, Cytochrome Bc1 Complex From Bovine Length = 446 Back     alignment and structure
>pdb|1QCR|A Chain A, Crystal Structure Of Bovine Mitochondrial Cytochrome Bc1 Complex, Alpha Carbon Atoms Only Length = 446 Back     alignment and structure
>pdb|1BCC|A Chain A, Cytochrome Bc1 Complex From Chicken Length = 446 Back     alignment and structure
>pdb|3CWB|A Chain A, Chicken Cytochrome Bc1 Complex Inhibited By An Iodinated Analogue Of The Polyketide Crocacin-d Length = 446 Back     alignment and structure
>pdb|3HDI|A Chain A, Crystal Structure Of Bacillus Halodurans Metallo Peptidase Length = 421 Back     alignment and structure
>pdb|3AMI|A Chain A, The Crystal Structure Of The M16b Metallopeptidase Subunit From Sphingomonas Sp. A1 Length = 445 Back     alignment and structure
>pdb|3AMJ|C Chain C, The Crystal Structure Of The Heterodimer Of M16b Peptidase From Sphingomonas Sp. A1 Length = 437 Back     alignment and structure
>pdb|1HR6|B Chain B, Yeast Mitochondrial Processing Peptidase Length = 443 Back     alignment and structure
>pdb|1HR7|B Chain B, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant Length = 443 Back     alignment and structure
>pdb|1Q2L|A Chain A, Crystal Structure Of Pitrilysin Length = 939 Back     alignment and structure
>pdb|3EOQ|A Chain A, The Crystal Structure Of Putative Zinc Protease Beta- Subunit From Thermus Thermophilus Hb8 Length = 406 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1008
3go9_A492 Insulinase family protease; IDP00573, structural g 1e-115
3go9_A492 Insulinase family protease; IDP00573, structural g 3e-13
3ami_A445 Zinc peptidase; alpha/beta, zinc binding, hydrolas 3e-37
3ami_A445 Zinc peptidase; alpha/beta, zinc binding, hydrolas 9e-10
3hdi_A421 Processing protease; CAGE structure, M16B peptidas 2e-33
1q2l_A939 Protease III; hydrolase; 2.20A {Escherichia coli s 4e-33
3eoq_A406 Putative zinc protease; two similar domains of bet 4e-33
3eoq_A406 Putative zinc protease; two similar domains of bet 4e-05
1pp9_A446 Ubiquinol-cytochrome C reductase complex core Pro 8e-31
1hr6_A475 Alpha-MPP, mitochondrial processing peptidase alph 4e-30
3amj_B424 Zinc peptidase inactive subunit; alpha/beta, zinc 3e-29
3amj_B424 Zinc peptidase inactive subunit; alpha/beta, zinc 2e-12
1hr6_B443 Beta-MPP, mitochondrial processing peptidase beta 7e-29
3gwb_A434 Peptidase M16 inactive domain family protein; pept 3e-28
3gwb_A434 Peptidase M16 inactive domain family protein; pept 5e-13
3cww_A990 Insulysin, insulin-degrading enzyme, insulinase; A 1e-27
1pp9_B439 Ubiquinol-cytochrome C reductase complex core Pro 2e-27
2fge_A995 Atprep2;, zinc metalloprotease (insulinase family) 2e-25
3cx5_A431 Cytochrome B-C1 complex subunit 1, mitochondrial; 4e-25
3cx5_B352 Cytochrome B-C1 complex subunit 2, mitochondrial; 1e-22
3d3y_A425 Uncharacterized protein; APC29635, conserved prote 3e-22
3d3y_A425 Uncharacterized protein; APC29635, conserved prote 5e-12
3s5m_A 1193 Falcilysin; M16 metalloprotease, peptidase, hydrol 8e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-14
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Length = 492 Back     alignment and structure
 Score =  363 bits (934), Expect = e-115
 Identities = 90/481 (18%), Positives = 182/481 (37%), Gaps = 15/481 (3%)

Query: 37  GVDYGRLDNGLFYYVRCN-SKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEK 95
               G+LDNG  + +     +P  R  L L V  GS+ E   E G AH++  LA  ++  
Sbjct: 25  AWQQGKLDNGFSWQLLATPQRPSDRIELRLIVNTGSLSENTQEVGFAHLLPRLALMSSAS 84

Query: 96  YTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRV 155
           +T   +    +           A+TS D T+Y L +P ++P+LL  A++ L++ +  + V
Sbjct: 85  FTPAQLQSLWQQGIDNERPLPPAITSYDFTLYSLSLPNNRPDLLKDALAWLSDTAGNLAV 144

Query: 156 SKDDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTV 215
           S+  +        +           +Q+  W   ++GS      P   + V + V  + +
Sbjct: 145 SEQTVNAALNTATDPI---ATFPQNIQEPWWRYRLKGSSLIGHDPG--QPVTQPVDVEKL 199

Query: 216 KRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRF 275
           K+FYQ+WY    M +  VG+  D++ +   I+  F + K     P       P   EP  
Sbjct: 200 KQFYQQWYTPDAMTLYVVGNV-DSRSIAAQISKAFSELKGKRTAPAAVATLAPLPPEPVS 258

Query: 276 SCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFS 335
              +  +A    + + +  P + ++            +   AL     ++  + +     
Sbjct: 259 --LMNEQAAQDTLSLMWDTPWHPIQDSMALSRYWRSDLAREALFWHIKQVLEKNNQKNLK 316

Query: 336 CSASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSE 395
                    +  +   +  +         +  +  E+A +R +G S+ E          +
Sbjct: 317 LGFDCRVQYQRAQ-CAIHLNTPVENLTANMTFVARELAALRANGLSQAEFDALMTQKNDQ 375

Query: 396 VESAYLERDQMQSTNLRDECLQHFLCKEPIIGIEYEARLQKTLLPHISALEVSRYSEK-L 454
           +   +    +  +  L  + L+        I  E   +L++  L  ++  E++R  ++ L
Sbjct: 376 LSKLFATYARTDTDILMSQRLRSQQSGVVDIAPEQYQKLRQAFLSGLTLAELNRELKQQL 435

Query: 455 QTSCSCVIKTIEPQTFSTIDDLKNIVLKIKNLEEKNISPWDEENIPEEIVSTKPSPGNIV 514
               + V+   + +    +  L+ I   I   +    +  +EE  P E V T P      
Sbjct: 436 SQDTTLVLMQPKGEPEVNVKALQEIYNGIMAPQ----TVAEEEVAPAEAVETAPVMPTTA 491

Query: 515 Q 515
           Q
Sbjct: 492 Q 492
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Length = 492 Back     alignment and structure
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Length = 445 Back     alignment and structure
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Length = 445 Back     alignment and structure
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Length = 421 Back     alignment and structure
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 939 Back     alignment and structure
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Length = 406 Back     alignment and structure
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Length = 406 Back     alignment and structure
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Length = 446 Back     alignment and structure
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Length = 475 Back     alignment and structure
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Length = 424 Back     alignment and structure
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Length = 424 Back     alignment and structure
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Length = 443 Back     alignment and structure
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Length = 434 Back     alignment and structure
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Length = 434 Back     alignment and structure
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Length = 990 Back     alignment and structure
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Length = 439 Back     alignment and structure
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 995 Back     alignment and structure
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Length = 431 Back     alignment and structure
>3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* Length = 352 Back     alignment and structure
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Length = 425 Back     alignment and structure
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Length = 425 Back     alignment and structure
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Length = 1193 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1008
d1ppja1232 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 6e-23
d1ppja1232 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 5e-06
d2fgea4257 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 9e-22
d2fgea4257 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 2e-04
d1hr6b1222 d.185.1.1 (B:24-245) Mitochondrial processing pept 1e-20
d1hr6b1222 d.185.1.1 (B:24-245) Mitochondrial processing pept 6e-10
d1hr6a1220 d.185.1.1 (A:14-233) Mitochondrial processing pept 2e-20
d1ppjb1219 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 3e-20
d3cx5a1213 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 4e-18
d3cx5a1213 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 1e-06
d3cx5b1202 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 1e-17
d3cx5b1202 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 0.004
d1q2la4240 d.185.1.1 (A:24-263) Protease III {Escherichia col 7e-17
d1q2la4240 d.185.1.1 (A:24-263) Protease III {Escherichia col 4e-05
d1q2la1229 d.185.1.1 (A:504-732) Protease III {Escherichia co 3e-11
d1q2la1229 d.185.1.1 (A:504-732) Protease III {Escherichia co 2e-09
>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 232 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Cytochrome bc1 core subunit 1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 96.3 bits (238), Expect = 6e-23
 Identities = 49/229 (21%), Positives = 90/229 (39%), Gaps = 10/229 (4%)

Query: 38  VDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYT 97
               +LDNGL      +S+P     + + + AGS  E E   G  + VEHLAF  T+   
Sbjct: 13  TQVSQLDNGLRVASEQSSQPT--CTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRP 70

Query: 98  NHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSK 157
            + + K +ES+GA   A            +  +      + L +A+ +LA+      +  
Sbjct: 71  GNALEKEVESMGAHLNAYST-------REHTAYYIKALSKDLPKAVELLADIVQNCSLED 123

Query: 158 DDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKR 217
             +EKER  +L+E + N  +   +   +                G  + +R +S   +  
Sbjct: 124 SQIEKERDVILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRKLSRADLTE 183

Query: 218 FYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFP 266
           +  + Y+   M + A G   + + +++L   HF       D   +P   
Sbjct: 184 YLSRHYKAPRMVLAAAGGL-EHRQLLDLAQKHFSGLSGTYDEDAVPTLS 231
>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 232 Back     information, alignment and structure
>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 257 Back     information, alignment and structure
>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 257 Back     information, alignment and structure
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 222 Back     information, alignment and structure
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 222 Back     information, alignment and structure
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 220 Back     information, alignment and structure
>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 219 Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 Back     information, alignment and structure
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 202 Back     information, alignment and structure
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 202 Back     information, alignment and structure
>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Length = 240 Back     information, alignment and structure
>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Length = 240 Back     information, alignment and structure
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Length = 229 Back     information, alignment and structure
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Length = 229 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1008
d1ppja1232 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 100.0
d1hr6a1220 Mitochondrial processing peptidase (MPP) alpha cha 100.0
d1ppjb1219 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 100.0
d1hr6b1222 Mitochondrial processing peptidase (MPP) beta chai 100.0
d1q2la4240 Protease III {Escherichia coli [TaxId: 562]} 100.0
d3cx5a1213 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 100.0
d2fgea4257 Presequence protease 1, PREP1 {Thale cress (Arabid 100.0
d1hr6b1222 Mitochondrial processing peptidase (MPP) beta chai 100.0
d1ppja1232 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 100.0
d1hr6a1220 Mitochondrial processing peptidase (MPP) alpha cha 100.0
d3cx5b1202 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 100.0
d1q2la4240 Protease III {Escherichia coli [TaxId: 562]} 99.98
d1ppjb1219 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 99.97
d3cx5a1213 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 99.97
d2fgea4257 Presequence protease 1, PREP1 {Thale cress (Arabid 99.94
d3cx5b1202 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 99.93
d1hr6b2217 Mitochondrial processing peptidase (MPP) beta chai 99.92
d1ppjb2204 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 99.9
d1hr6b2217 Mitochondrial processing peptidase (MPP) beta chai 99.9
d1hr6a2237 Mitochondrial processing peptidase (MPP) alpha cha 99.89
d1ppjb2204 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 99.89
d1q2la1229 Protease III {Escherichia coli [TaxId: 562]} 99.87
d1ppja2209 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 99.86
d1ppja2209 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 99.86
d1hr6a2237 Mitochondrial processing peptidase (MPP) alpha cha 99.85
d1q2la1229 Protease III {Escherichia coli [TaxId: 562]} 99.84
d3cx5a2218 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 99.81
d2fgea2196 Presequence protease 1, PREP1 {Thale cress (Arabid 99.8
d3cx5a2218 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 99.78
d1q2la2228 Protease III {Escherichia coli [TaxId: 562]} 99.64
d2fgea2196 Presequence protease 1, PREP1 {Thale cress (Arabid 99.56
d2fgea1258 Presequence protease 1, PREP1 {Thale cress (Arabid 99.33
d2fgea3268 Presequence protease 1, PREP1 {Thale cress (Arabid 99.33
d1q2la2228 Protease III {Escherichia coli [TaxId: 562]} 99.32
d2fgea3268 Presequence protease 1, PREP1 {Thale cress (Arabid 98.87
d1q2la3240 Protease III {Escherichia coli [TaxId: 562]} 98.8
d2fgea1258 Presequence protease 1, PREP1 {Thale cress (Arabid 98.57
d1q2la3240 Protease III {Escherichia coli [TaxId: 562]} 98.18
d3cx5b2150 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 97.17
d3cx5b2150 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 95.48
>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Cytochrome bc1 core subunit 1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1e-40  Score=282.45  Aligned_cols=219  Identities=25%  Similarity=0.418  Sum_probs=199.0

Q ss_pred             CCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf             99984899818996899962699885599999981358787899978259999871479889991369999998045259
Q 001831           34 QPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFG  113 (1008)
Q Consensus        34 ~~~~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~g~~~g  113 (1008)
                      .| .+++++|+|||+|++.+++.+  .+++++++++|+++|+.+..|++|+++|++|+|+++++..++.+.++..|+.+ 
T Consensus        10 ~p-~~~~~~L~NGl~V~~~~~~~~--~~~i~l~~~~Gs~~e~~~~~G~a~ll~~~~~~g~~~~~~~~~~~~l~~~g~~~-   85 (232)
T d1ppja1          10 VP-ETQVSQLDNGLRVASEQSSQP--TCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPGNALEKEVESMGAHL-   85 (232)
T ss_dssp             SC-CCEEEECTTSCEEEEEECCCS--EEEEEEEESCSGGGCCTTTTTHHHHHHHHTTSCBSSSTTTHHHHHHHHTTCEE-
T ss_pred             CC-CCEEEECCCCCEEEEECCCCC--EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC-
T ss_conf             88-767999999999999769999--79999998344545588876418999877741775211015788876530232-


Q ss_pred             CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHCC
Q ss_conf             98532356781799988789997889999999998204998792789999978999986079921-22489999988059
Q 001831          114 ACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNAS-GRMQDAHWVLMMEG  192 (1008)
Q Consensus       114 ~~~na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~~~~er~~i~~e~~~~~~~~-~~~~~~~~~~~~~~  192 (1008)
                         +++|+.|+|.|.+.++++   +++.+|+++++++.+|.|++++++++|..+..+++.+.+++ ..+.+.++..+|++
T Consensus        86 ---~~~~~~~~~~~~~~~~~~---~l~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (232)
T d1ppja1          86 ---NAYSTREHTAYYIKALSK---DLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDTSMRDVVFNYLHATAFQG  159 (232)
T ss_dssp             ---EEEECSSCEEEEEEEEGG---GHHHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTT
T ss_pred             ---CCCCCCHHHHEECCCHHH---HHHHHHHHHHHHHHHCCCCHHHHHHHHCEEECCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             ---333563143114242067---79999999999865300057776332211101114555458899999998875247


Q ss_pred             CCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             998866898887774489999999998812668971899993699978999999976347999999999899
Q 001831          193 SKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPK  264 (1008)
Q Consensus       193 ~p~~~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~~  264 (1008)
                      |||+ ++..|+.+++++++.++|++||++||+|+||+|+|+||+ |++++.++++++||.||+...+...|.
T Consensus       160 ~p~~-~~~~g~~~~l~~it~e~l~~f~~~~y~~~n~~l~i~Gd~-~~~~l~~l~~~~fg~l~~~~~~~~~P~  229 (232)
T d1ppja1         160 TPLA-QSVEGPSENVRKLSRADLTEYLSRHYKAPRMVLAAAGGL-EHRQLLDLAQKHFSGLSGTYDEDAVPT  229 (232)
T ss_dssp             SGGG-SCSSCCHHHHHHCCHHHHHHHHHHHCCGGGEEEEEEESC-CHHHHHHHHHHHHTTSCSCCCSTTCCC
T ss_pred             CCCC-CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC-CHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             8654-567789999987768999999997288577799999099-999999999999745899999999999
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3cx5b2 d.185.1.1 (B:219-368) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d3cx5b2 d.185.1.1 (B:219-368) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure