Citrus Sinensis ID: 001909
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 997 | ||||||
| 225442773 | 1059 | PREDICTED: uncharacterized protein LOC10 | 0.950 | 0.895 | 0.396 | 0.0 | |
| 225442777 | 1016 | PREDICTED: uncharacterized protein LOC10 | 0.968 | 0.950 | 0.413 | 0.0 | |
| 224054162 | 1063 | predicted protein [Populus trichocarpa] | 0.952 | 0.893 | 0.392 | 0.0 | |
| 225442779 | 1009 | PREDICTED: uncharacterized protein LOC10 | 0.965 | 0.954 | 0.407 | 0.0 | |
| 449436589 | 1072 | PREDICTED: uncharacterized protein LOC10 | 0.949 | 0.883 | 0.370 | 0.0 | |
| 449491110 | 1072 | PREDICTED: LOW QUALITY PROTEIN: uncharac | 0.949 | 0.883 | 0.370 | 0.0 | |
| 297743363 | 1790 | unnamed protein product [Vitis vinifera] | 0.925 | 0.515 | 0.393 | 0.0 | |
| 356528950 | 1055 | PREDICTED: uncharacterized protein LOC10 | 0.944 | 0.892 | 0.375 | 0.0 | |
| 147816747 | 1037 | hypothetical protein VITISV_036654 [Viti | 0.929 | 0.893 | 0.370 | 0.0 | |
| 356522367 | 1053 | PREDICTED: uncharacterized protein LOC10 | 0.947 | 0.897 | 0.379 | 0.0 |
| >gi|225442773|ref|XP_002280900.1| PREDICTED: uncharacterized protein LOC100248030 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/981 (39%), Positives = 586/981 (59%), Gaps = 33/981 (3%)
Query: 25 PSVVYTYNRFAEIQEKCGSVLSSASELKPDDNRSSRIKEELSFVNGDWEQDSGGAPLMPF 84
PSV Y Y+R E+++ CG VLSSASELKPDDNR IK+EL FVNGDW QD+GG PLMP+
Sbjct: 40 PSVTYKYDRIDEVKKACGFVLSSASELKPDDNRVYSIKKELPFVNGDWVQDAGGLPLMPY 99
Query: 85 DDKEMHRSPAGPGSFLKLASFWVVDVDPVRRTRNMVSLSGIMEIGVTARQPFSYRPGWSP 144
++ + + + + L SFWV DVD RR +N VS+SG++ +G+T F + + P
Sbjct: 100 VVRKSWDNSSDFHTPMNLVSFWVTDVDTTRRLKNSVSVSGLLTLGITLENSFVEKI-YGP 158
Query: 145 KFRKDPGLSSMTILFEGVYIESEENGGEWLICLLGTSMMP-RTNQFLPSWELADMYGYKF 203
+F+ PG S +++ F+G+Y ES+EN GE ++CLLGT+M+P R + W + G+ +
Sbjct: 159 QFQVWPGNSQLSVSFQGIYTESKENNGEKVMCLLGTTMLPSREPESSDPWAWLEASGHSY 218
Query: 204 GEHHQPPLIQDDQIMLVLRYNRTFSLTTGNITGEMKSLHEKSDFKYFDGVHLSSHLGLHS 263
Q PL +DDQI+LVLRY + F+LT + GEMKSL+ KS+ KYFD + +SS L ++
Sbjct: 219 D---QLPLSEDDQILLVLRYPKKFTLTKREVHGEMKSLNPKSNPKYFDEIRISSQL--NT 273
Query: 264 KYQFGAEELLSKACSPYPYQDSLVDEEVILFKDDNICDTLHRYVSRGMFDIMPSWKSVGS 323
Y+F +E++++KAC PYPY+DS ++ + ++KD C + ++ F I+P+W+ G+
Sbjct: 274 AYEFSSEKVVAKACDPYPYKDSFMNNGIEIYKDTEFCAIIQKFSQGEAFTIVPNWRCNGT 333
Query: 324 NDDANKLGPFILNGTAKDMDSGSNYFRLNVQNLRCSQGIDENNSNYARVFALFRVIQSWE 383
++ +KLGPF+ + K D G +L +QN+ C + +N+N ARV A+FR + E
Sbjct: 334 DEYCSKLGPFVTDKEIKATDGGFQEVKLFMQNVHCEEKTARDNTNSARVSAVFRAVPPSE 393
Query: 384 GEYTSADRTGLSGLTLSAEGIWRSSEGQLCMVGCLGVVETSSQRCNSRICLHFPLTFSIT 443
YT+A R+GLS +TL AEGIWRSS GQLCMVGC+G + CNSRICL+ P++FS+
Sbjct: 394 YPYTAAQRSGLSNMTLPAEGIWRSSSGQLCMVGCIGSTDAEGSGCNSRICLYIPVSFSVK 453
Query: 444 QGTTVFGTITSIS-DTDSQTPLWFEKKTPPDHITSPKYLKDLGKKWSYKYSKIMQAKAFQ 502
Q + + GTI+SIS D S PL FEK P + + + Y+Y+K+ A +
Sbjct: 454 QRSIIVGTISSISNDHSSYFPLSFEKLVQPSEMWDLNHF--MSSHLHYQYTKLDSAGSIL 511
Query: 503 TGSKPSVLGTLLRK-FLAYPSAYDGGIS--SLSFLADELSLSGCVVPYAIPKAHMQSTCV 559
++P GT+++K L +P D S SLS L+++L+L V P +
Sbjct: 512 EKNEPFSFGTVIKKSLLTFPKLEDAEASPVSLSILSEDLTLH--VSAIPDPPPRSPVPRI 569
Query: 560 TVRLHVLSLGSLFGRYWPQSCGCHQEVEQSSDFNAQT--------IEASGHLNIFGEHFN 611
+++ ++SLG LFGRYW VE+ + ++ + + S L + G+ +
Sbjct: 570 EIQMEIVSLGPLFGRYWSNG----STVEEDTPYHTKAEYTEKQLLLNVSAQLMLTGKAYK 625
Query: 612 NISMSF-EGIYDLTAGKMYLVGCRDVRLIQKKIKEEMNLERGMDCQFQVKVEYSPKDARW 670
N S+ F EG+YD GKMYLVGCRD R K + E M+LE G+DC +V V Y P A+W
Sbjct: 626 NFSVVFVEGLYDPHVGKMYLVGCRDFRASWKTLFESMDLEAGLDCLIEVIVSYPPTTAQW 685
Query: 671 LKNSEVKISISSKRSKEDPLYFNPVSLKANQIHYDKQLTNMVLRKTFEDILRVLLLIIAI 730
L N +ISI+S R+++DPL+F+ + + I Y +Q N++ R+ E ILR+L L + I
Sbjct: 686 LTNPIARISITSARNEDDPLHFSTIKFQTLPIMYRRQRENILSRRGVEGILRILTLSVVI 745
Query: 731 VCTGSQLQYINHCIDPFSYISLVMIYIPAVDYISPLISNGEIFFKWKSFHAHRNQSYEMM 790
C SQL YI +D YISLVM+ + + Y PLI++ E FK K+ ++ SYE+
Sbjct: 746 ACIVSQLLYIRDNVDSVPYISLVMLGVQVLGYSLPLITDAEALFK-KASDSYGTPSYELD 804
Query: 791 NYDRFRFLGYVIKVLSLYALWLTSNLGKKVSATRVRQMGHGLKQQSRLPNEKKIVLITCA 850
F + Y +K+L L + LT L +KV +R+R + + R+P++K + + T
Sbjct: 805 RNQWFHVIDYTVKLLVLVSFLLTLRLCQKVWKSRIRLLTRAPLESHRVPSDKWVFITTLI 864
Query: 851 VHVFGFLVTHVIREMNAVETVPAPDKFVNERSKL---LEWLKELDAYLLLVPDFFLLPQI 907
+HV G+++ +I E + +V+ EW EL+ Y+ LV DFFLLPQ+
Sbjct: 865 IHVIGYIIVLIIHAAQTGEKFRT-ESYVDSNGNFHVQREWETELEEYVGLVQDFFLLPQV 923
Query: 908 VGNVLWGNKGKPLRKFYYMGLTCLRFLLHIYDYVRDPVLLENYYGGFDRQKKSLDLNSKF 967
+GN +W KPLRK Y++G+T +R L H YDY+R PV + ++ ++D SKF
Sbjct: 924 MGNFVWQIHCKPLRKLYFIGITVVRLLPHFYDYIRAPVSNPYFSEEYEFVNPNMDFYSKF 983
Query: 968 GNIAVAVIAILLAMTVYKQQK 988
G+IA+ V A LA+ VY QQ+
Sbjct: 984 GDIAIPVTAFFLAVIVYIQQR 1004
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442777|ref|XP_002280964.1| PREDICTED: uncharacterized protein LOC100244611 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224054162|ref|XP_002298122.1| predicted protein [Populus trichocarpa] gi|222845380|gb|EEE82927.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225442779|ref|XP_002280970.1| PREDICTED: uncharacterized protein LOC100266929 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449436589|ref|XP_004136075.1| PREDICTED: uncharacterized protein LOC101220341 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449491110|ref|XP_004158803.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101220341 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297743363|emb|CBI36230.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356528950|ref|XP_003533060.1| PREDICTED: uncharacterized protein LOC100795773 [Glycine max] | Back alignment and taxonomy information |
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| >gi|147816747|emb|CAN64395.1| hypothetical protein VITISV_036654 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356522367|ref|XP_003529818.1| PREDICTED: uncharacterized protein LOC100794859 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 997 | ||||||
| TAIR|locus:2011566 | 1059 | AT1G52780 "AT1G52780" [Arabido | 0.940 | 0.885 | 0.337 | 4e-145 | |
| TAIR|locus:2119078 | 962 | AT4G21700 "AT4G21700" [Arabido | 0.310 | 0.322 | 0.281 | 4.8e-21 |
| TAIR|locus:2011566 AT1G52780 "AT1G52780" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1418 (504.2 bits), Expect = 4.0e-145, P = 4.0e-145
Identities = 339/1004 (33%), Positives = 529/1004 (52%)
Query: 18 ENWDDDIPSVVYTYNRFAEIQEKCGSVLSSASELKPDD-NRSSR-IKEELSFVNGDWEQD 75
E+ D+ P + +Y+R ++++KC SVLSSASELK +D +R+ R K L F GDW QD
Sbjct: 41 EHRDESAPKI--SYDRINDVKKKCKSVLSSASELKLEDISRTPRKSKRNLGFRYGDWNQD 98
Query: 76 SGGAPLMPFDDKE-MHRSPAGPGSFLKLASFWVVDVDPVRRTRNMVSLSGIMEIGVTARQ 134
SG +P++PFD + S P + L SF V D+D RT+ + ++G++ + +T
Sbjct: 99 SGDSPILPFDSTNTLRNSSTKP---MNLVSFSVTDLDLPHRTKKYIGVNGVLLLAITMFS 155
Query: 135 PF-SYRPGWSPKFRKDPGLSSMTILFEGVYIESEENGGEWLICLLGTSMMPRTNQFLPS- 192
S R +F P + + I F+G+Y+E++++ E ++C+LG +M+P ++ S
Sbjct: 156 ELPSLRSYGLREFELWPSHTQLKISFQGIYVENDDD--ERVLCMLGETMLPSRDESDSSN 213
Query: 193 -WELADMYGYKFGEHHQPPLIQDDQIMLVLRYNRTFSLTTGNITGEMKSLHEKSDFKYFD 251
W+ EH PPL+QDD I+L+LRY ++F+LT I GE+ SL++K K FD
Sbjct: 214 PWKWVK-------EHDTPPLLQDDMILLLLRYPKSFTLTKRVIQGELTSLNQKPSLKLFD 266
Query: 252 GVHLSSHLGLHSKYQFGAEELLSKACSPYPYQDSLVDEE----VILFKDDNICDTLHRYV 307
+HL S LG +Y F + +L+SKAC PYPY++ + ++K+ CD L R
Sbjct: 267 KIHLFSQLGKSVRYDFVSNDLVSKACDPYPYKNDTFTSSGSGGINVYKEKGFCDLLQRVT 326
Query: 308 SRGMFDIMPSWKSVGSNDDANKLGPFILNGTAKDMDSGSNYFRLNVQNLRCSQGIDENNS 367
+R ++P+WK G+++ +KLGPF + K D +L +QN+ C + + S
Sbjct: 327 NRAPLTVVPNWKCHGTDEYCSKLGPFAFDKDIKSTDGSFKDVKLYMQNVHCEETAARSQS 386
Query: 368 N-YARVFALFRVIQSWEGEYTSADRTGLSGLTLSAEGIWRSSEGQLCMVGCL-GVVETSS 425
+ +V A+FR + E Y S R+G+ +T++AEGIW+ S GQLCMVGC G V+
Sbjct: 387 DAVTKVSAVFRAVHPNENLYISGMRSGIDNMTVTAEGIWKPSSGQLCMVGCRRGQVDG-- 444
Query: 426 QRCNSRICLHFPLTFSITQGTTVFGXXXXXXXXXXQTP----LWFEKKTPPDHITSPKYL 481
CN+RICL+ P TFSI Q + + G TP L FEK P + Y
Sbjct: 445 --CNARICLYIPTTFSIRQRSILVGTFSCLNTEKNLTPSFFPLSFEKLVEP--MDMQNYF 500
Query: 482 KDLGKKWSYKYSKIMQAKAFQTGSKPSVLGTLLRK-FLAYPSAYDGG--ISSLSFLADEL 538
Y YSK+ A A ++ GT+++K + +P D +SSLS LA++L
Sbjct: 501 HSSASHPFYSYSKLDDAGAILERNEEFSFGTIIKKSVMHFPKLEDSDDLLSSLSLLAEDL 560
Query: 539 SLSGCVVPYAIPKAHMQSTCVTVRLHVLSLGSLFGRYWPQSCGCHQEVEQSSDFNAQT-- 596
+ P A + T + VLSLG LFG +W S +Q++ + +
Sbjct: 561 TFH---TP-AFTEKRASGT--NFGMDVLSLGPLFGLFWRTSN--FSIADQTTPYRTKAEY 612
Query: 597 ------IEASGHLNIFGEHFNNISMSF-EGIYDLTAGKMYLVGCRDVRLIQKKIKEEMNL 649
+ SG +++ GE+F N S+ + EG+YD GKMYLVGCRDVR K + E +L
Sbjct: 613 TEKQLLLNVSGQISLTGENFGNFSVLYLEGLYDEHVGKMYLVGCRDVRASWKILFESPDL 672
Query: 650 ERGMDCQFQVKVEYSPKDARWLKNSEVKISISSKRSKEDPLYFNPVSLKANQIHYDKQLT 709
E G+DC V V Y P +RWL + K+SISS R ++DPLYF P+ LK I Y +Q
Sbjct: 673 EAGLDCLIDVVVSYPPIKSRWLADPTAKVSISSNRPEDDPLYFKPIKLKTTPIFYRRQRE 732
Query: 710 NMVLRKTFEDXXXXXXXXXXXXCTGSQLQYINHCIDPFSYISLVMIYIPAVDYISPLISN 769
+++ R E C S L Y++ D ++SLVM+ + A+ Y PLI+
Sbjct: 733 DILSRAGVEGILRVLTLTFSIGCITSLLFYVSSNTDSLPFVSLVMLGVQALGYSLPLITG 792
Query: 770 GEIFFKWKSFHA--HRNQSYEMMNYDRFRFLGYVIKVLSLYALWLTSNLGKKVSATRVRQ 827
E FK K+ A + SY++ F + Y +K+L + LT L +KV +R R
Sbjct: 793 AEALFKRKAASATTYETPSYDLQRSQWFNVIDYTVKLLVMVCFLLTLRLCQKVWKSRARL 852
Query: 828 MGHGLKQQSRLPNEKKIVLITCAVHVFGFLVTHVIREMNAVETVPAPDKFVNERSKLLEW 887
+ ++ ++P++++++L+ +H G++V + A V + + S W
Sbjct: 853 LTRTPQEPHKVPSDRRVLLVVLILHALGYIVALIRHPARADRLVGG--SYGSNASNW--W 908
Query: 888 LKELDAYLLLVPDFFLLPQIVGNVLWG-NKGKPLRKFYYMGLTCLRFLLHIYDYVRDPVL 946
E + Y+ LV DFFLLPQ++ N +W + +PLRK YY G+T +R H YDY+ V
Sbjct: 909 QTETEEYIGLVQDFFLLPQVIANAMWQIDSRQPLRKLYYFGITLVRLFPHAYDYIVGSVP 968
Query: 947 LENYYGGFDRQ--KKSLDLNSKFGNXXXXXXXXXXXMTVYKQQK 988
+ Y+ G + + + D SKFG+ + V+ QQ+
Sbjct: 969 -DPYFIGEEHEFVNPNFDFFSKFGDIAIPVTAILLAVIVFVQQR 1011
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| TAIR|locus:2119078 AT4G21700 "AT4G21700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00034525001 | SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (2052 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 997 | |||
| pfam11145 | 871 | pfam11145, DUF2921, Protein of unknown function (D | 1e-146 |
| >gnl|CDD|221000 pfam11145, DUF2921, Protein of unknown function (DUF2921) | Back alignment and domain information |
|---|
Score = 458 bits (1180), Expect = e-146
Identities = 268/987 (27%), Positives = 440/987 (44%), Gaps = 168/987 (17%)
Query: 41 CGSVLSSASELKP-DDNRSSRIKEELSFVNGDWEQDSGGAPLMPFDDKEMHRSPAGPGSF 99
C S++ +SELK D R +LSF +GDW Q SGG PL P D + G
Sbjct: 5 CSSIVPESSELKDEDPTRPLVRSRQLSFFDGDWFQ-SGGDPLFPRDGSDA-------GDS 56
Query: 100 LKLASFWVVDVDPVRRTRNMVSLSGIMEIGVTARQPFSYRPGWSPKFRKD-----PGLSS 154
L+LASF V + RR ++ + G++ + ++ S PG +
Sbjct: 57 LRLASFSVTHIRKTRRAGKIIKVEGVLVLTISRTSASSSYYSGDHGQSSLEFELIPGGTQ 116
Query: 155 MTILFEGVYIESEENGGEWLICLLGTSMMPRTNQFLPSWELADMYGYKFGEHHQPPLIQD 214
++I+F+G Y ESE ++C++G+ ++ PP+ D
Sbjct: 117 LSIVFQGFYSESEG-----VLCMVGSGVLK--------------------SVDGPPVKLD 151
Query: 215 DQIMLVLRYNRTFSLTTGNITGEMKSLHEKSDFKYFDGVHLSSHLGLHSKYQFGAEELLS 274
+ +L+LRY + +LTT +TGE++S SD YFD + L S+ G Y++ EL++
Sbjct: 152 EDALLMLRYPKESTLTTRLVTGELESTDSLSDLAYFDTISLVSYPGTPDNYEY---ELVA 208
Query: 275 KACSPYPYQDSLVDEE---VILFKDDNICDTLHRYVSRGMFDIMPSWKSVGSNDDANKLG 331
+AC P+ Y+D+ V+ L+K + CD L R + +F + +W +++ + G
Sbjct: 209 EACDPFMYKDTGVNGGSSLSDLYKGNGFCDVLERL-TSRVFTLEYNWDCNSTDECSPFGG 267
Query: 332 PFILNGTAKDMDSGSNYFRLNVQNLRCSQGIDENNSNYARVFALFRVIQSWEGEYTSADR 391
PF R+++Q++ C + N + RV +FR + +E Y R
Sbjct: 268 PFEYTP-----------VRISMQDVHC----EGNGA--VRVSVVFRAVSPYEHLYPFDPR 310
Query: 392 TGLSGLTLSAEGIWRSSEGQLCMVGC-LGVVETSS-----QRCNSRICLHFPLTFSITQG 445
TGL +TL AEG+W +S G+LCMV C +G S C+ R+ L FP TFSI
Sbjct: 311 TGLRNMTLVAEGVWDASTGRLCMVACRIGNSSASLSNAVVGDCSLRLSLRFPTTFSIRDR 370
Query: 446 TTVFGTITSISDTDSQTPLWFEKKTPPDHITSPKYLKDLGKKWS------YKYSKIMQAK 499
+ V G I S + S PL F + PP + + + S Y+Y+K+ +A
Sbjct: 371 SIVVGEIWSANTGPSNFPLSFRRIVPPSDMFN-----SFNRSLSNPRVVKYEYTKVERAG 425
Query: 500 AFQTGSKPSVLGTLLRKFLAYPSAYDGGISSLSFLADELSLSGCVVPYAIPKAHMQSTCV 559
+KPS + ++YP G+ SLS LA +LS+ P +A
Sbjct: 426 KLLRRNKPS---GKKKSLVSYPGN--LGMYSLSDLAFDLSVKFSAGPNRTGRASP----- 475
Query: 560 TVRLHVLSLGSLFGRYWPQS-----------CGCHQEVEQSSDFNAQTIEASGHLNIFGE 608
L +G L R+ P S G V ++Q + S +++ G
Sbjct: 476 ------LFVGPLLYRFDPLSRNSGSTRTAPYPGIPMVVNMQ---HSQLLNVSYDISLSGP 526
Query: 609 HFNNIS-MSFEGIYDLTAGKMYLVGCRDVRLIQKKIKEEMNLERGMDCQFQVKVEYSPKD 667
+ S +S EG+YD G++ +VGCRDVRL + E GMDC
Sbjct: 527 LSGSRSVISAEGVYDRETGRLCMVGCRDVRLPWRISSN----EEGMDCS----------- 571
Query: 668 ARWLKNSEVKISISSKRSKEDPLYFNPVSLKANQIHYDKQLTNMVLRKTFEDILRVLLLI 727
+ L++ I+Y +Q + + R E I+ V+ L
Sbjct: 572 ---------------------------ILLRSTPIYYRRQAKDSIWRMDLEGIMVVVSLT 604
Query: 728 IAIVCTGSQLQYINHCIDPFSYISLVMIYIPAVDYISPLISNGEIFFKWKSFHAHRNQSY 787
++ V G QL ++ D ++SLVM+ + A+ Y++PL+ N E FK
Sbjct: 605 LSCVFAGLQLFHVKSHPDVLPFVSLVMLGVQALGYMTPLVLNFEALFK-----GSHRTQN 659
Query: 788 EMMNYDR-FRFLGYVIKVLSLYALWLTSNLGKKVSATRVRQMGHGLKQQSRLPNEKKIVL 846
+ D ++VL+L A LT L + V +R R + P E+K++
Sbjct: 660 TPLERDGWLEANEVTVRVLTLIAFLLTLRLLQLVWRSRAR--ALARSPEEPSPAERKVLY 717
Query: 847 ITCAVHVFGFLVT---HVIREMNAVETVPAPDKFVNERSKLLEWL-KELDAYLLLVPDFF 902
+ +++ G L+ H IR + V V S L +L++Y LV D F
Sbjct: 718 VCLPLYLLGGLIALAVHRIRTNKGI--VYIEKPQVVRISFQSPTLWADLESYAGLVLDGF 775
Query: 903 LLPQIVGNVLWGNKGKPLRKFYYMGLTCLRFLLHIYDYVRDPVLLENYYGG-FDRQKKSL 961
LLPQ++ N W ++ KPL ++Y+G+T +R L H+YD +R + + G F +
Sbjct: 776 LLPQVIFNAFWSSRCKPLSAWFYVGITLVRLLPHVYDLLRAHNYVPYFRGSSFIYANPKM 835
Query: 962 DLNSKFGNIAVAVIAILLAMTVYKQQK 988
D S ++ + ++A+LLA+ ++ QQ+
Sbjct: 836 DFFSTAWDVIIPLVAVLLALLIFLQQR 862
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This eukaryotic family of proteins has no known function. Length = 871 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 997 | |||
| PF11145 | 909 | DUF2921: Protein of unknown function (DUF2921); In | 100.0 | |
| PF11145 | 909 | DUF2921: Protein of unknown function (DUF2921); In | 99.97 | |
| KOG0828 | 636 | consensus Predicted E3 ubiquitin ligase [Posttrans | 99.78 |
| >PF11145 DUF2921: Protein of unknown function (DUF2921); InterPro: IPR021319 This eukaryotic family of proteins has no known function | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-234 Score=2081.53 Aligned_cols=874 Identities=36% Similarity=0.559 Sum_probs=773.6
Q ss_pred HhhccCCCCCCCCCCCCC-CccccccccceeccccceecCCCCCCCCCCCCcCCCCCCCCCcccceeEEEEecCCccccc
Q 001909 38 QEKCGSVLSSASELKPDD-NRSSRIKEELSFVNGDWEQDSGGAPLMPFDDKEMHRSPAGPGSFLKLASFWVVDVDPVRRT 116 (997)
Q Consensus 38 ~~~C~s~lssa~el~~d~-~~~~~l~~~l~f~~Gdw~q~~G~~pL~p~d~~~~~~s~s~~~~~l~lasf~~tdvd~~~r~ 116 (997)
|+||+|++++|+|+++++ +.+...+.+|+|.+|||+| +||+||||+|+++.++. ++++|||+|||+..+|.
T Consensus 2 ~~hC~svvp~a~~l~~~~~~~~~~~s~~L~~~~ggyfq-~GGd~Lfp~d~s~~~~~-------~r~~SF~~~~V~~T~~~ 73 (909)
T PF11145_consen 2 KRHCASVVPSASELKDDDDTRSLLISFELSFFNGGYFQ-AGGDPLFPFDDSDSPSS-------LRSFSFWPTHVDRTTRP 73 (909)
T ss_pred cccccCCCCCccccccccCcccccccccccCCCCCeec-CCCCCCCCCCccccccc-------cceEEEEeeeeccccCC
Confidence 689999999999998766 6777889999999999999 89999999999887642 89999999999999999
Q ss_pred cceEEeEEEEEEEEeccCCCCCCCC-----CCCCcccCCCcceEEEEEEEEEeeecCCCceeeEEEEeeccCCCCCCCCC
Q 001909 117 RNMVSLSGIMEIGVTARQPFSYRPG-----WSPKFRKDPGLSSMTILFEGVYIESEENGGEWLICLLGTSMMPRTNQFLP 191 (997)
Q Consensus 117 ~~~v~vsg~L~l~isr~~~~~~~~~-----~~p~f~~~pg~s~ltf~lEG~Yses~~~~ge~~LCMVG~~~l~~~~d~~~ 191 (997)
++++||+|+|+|+|+|+++.++... .+|+|..|||+++|||.|||+|+|+ |++|||||+|+..
T Consensus 74 ~~vv~Vsg~LtL~isr~~~~~~~~~~~~~~~~~~~~~~pg~ssLsf~LeG~YSe~-----sg~LCMVGsgs~~------- 141 (909)
T PF11145_consen 74 GKVVKVSGTLTLSISRNSARSSYYYYDHRRRSPEFYRWPGRSSLSFSLEGFYSEG-----SGVLCMVGSGSGY------- 141 (909)
T ss_pred CcEEEEEEEEEEEeecCCCCccccccccccCCcceecCCCceEEEEEEEEEEEcC-----CCcEEEecccccc-------
Confidence 9999999999999999988765221 2799999999999999999999995 8889999999755
Q ss_pred chhhhhcccccCCCCCCCCccccccEEEEEecCCccccccccEEEEEEecCCCCCCCCcceEEEeeecCCCCccccCccc
Q 001909 192 SWELADMYGYKFGEHHQPPLIQDDQIMLVLRYNRTFSLTTGNITGEMKSLHEKSDFKYFDGVHLSSHLGLHSKYQFGAEE 271 (997)
Q Consensus 192 pw~~ak~~g~~~~~~~~pp~~~D~~i~L~LRyP~~~SLtsr~V~G~L~S~~~~~d~~YFd~Vslls~~g~~~~YeY~~~~ 271 (997)
..++||+..|++|+|+||||+++|||+|+|+|+|||+|+++|++|||+|+|++|++.+++|+| +
T Consensus 142 -------------s~~g~~v~~~~~~vL~LryPk~~sLtsr~V~G~LeS~n~~~d~~YFd~VsLls~~~~~~~Y~Y---~ 205 (909)
T PF11145_consen 142 -------------SNDGPPVKLDDNAVLVLRYPKPSSLTSRFVTGELESLNSKSDSAYFDPVSLLSQLEGYSNYEY---T 205 (909)
T ss_pred -------------CCCCCceeeecceEEEEcCCCcccccccceeEEEEecCCCCCccccceeEEEecCCCccCceE---E
Confidence 233588999999999999999999999999999999999999999999999999988799999 6
Q ss_pred cccccCCCCCCccchhhh---hhhhcCCcccccccccccccCceeeecCCCCCCCCCCCCCCCCceecCCcccCCCCCCc
Q 001909 272 LLSKACSPYPYQDSLVDE---EVILFKDDNICDTLHRYVSRGMFDIMPSWKSVGSNDDANKLGPFILNGTAKDMDSGSNY 348 (997)
Q Consensus 272 ~v~k~C~~~~~~d~~~~~---g~~~y~~~~~C~~l~~~~~~~~f~v~~~w~C~~t~~~cs~lgPf~~~~~~~~~~~~~p~ 348 (997)
+++++|+++++.+.+..+ +..+|.++++|++|++.+.+ +|+++|+|+||++++.|+++|||.. .+
T Consensus 206 lv~~sc~~~~~~d~~~~~~~~~~~~~~~~~~C~~L~~~~~~-~f~l~y~~~C~st~~~~~~~gp~~~-----------~~ 273 (909)
T PF11145_consen 206 LVSKSCDPPPYGDGDVGDGSSLSDVYSGNFFCSILRRFLRG-SFKLEYNWDCNSTDACCSFGGPFGL-----------LP 273 (909)
T ss_pred EccccCCCCcccccccccccccccccCCCCCChhhHhcCCC-ceEeEECCCCCCcccccCCCCCccc-----------CC
Confidence 678899998876533222 34569999999999998755 7999999999999999999999964 35
Q ss_pred eeeEEeeeeecCCCCCCCCCceEEEEEEEeccCCCcccccccccCCCCceEEEeeeeecCCCcEEEeecccc-c-----c
Q 001909 349 FRLNVQNLRCSQGIDENNSNYARVFALFRVIQSWEGEYTSADRTGLSGLTLSAEGIWRSSEGQLCMVGCLGV-V-----E 422 (997)
Q Consensus 349 ~~m~~~~i~C~~~~~~~~~~avrv~avFr~~~~~~~~~~a~~r~~~~~~~l~AEG~wd~~tg~LCmvgCr~~-v-----~ 422 (997)
++|+||++||+++ +++||+|+|||++|+++.+.+..|++++++||+|||+||+|+|||||||||.. + +
T Consensus 274 ~~m~~~~v~C~~~------g~vrv~~vF~~~~~~e~~~~~~~r~gl~~~tLvAEG~Wd~s~gqLCmvaCrv~~~~~s~~~ 347 (909)
T PF11145_consen 274 VRMHMQQVRCEED------GAVRVSAVFRNVSPSEHYYPARPRTGLSNMTLVAEGVWDSSSGQLCMVACRVGNSDDSLAN 347 (909)
T ss_pred ceEEEEeeEecCC------CcEEEEEEEcCCCchhhcccccccccccCceEEEEeeEcCCCCcEEEEeeeeccccccccc
Confidence 5699999999997 77999999999999999999999999999999999999999999999999853 1 2
Q ss_pred ccccCcceeEEEEccceeeeeccceEEEEEEeCCCCCCCCCcccccCCCCCCCCCCccccCCC---CcceeeechhhHHH
Q 001909 423 TSSQRCNSRICLHFPLTFSITQGTTVFGTITSISDTDSQTPLWFEKKTPPDHITSPKYLKDLG---KKWSYKYSKIMQAK 499 (997)
Q Consensus 423 s~~~dC~i~vsl~FPa~~si~~rs~i~G~I~S~r~~~~~~pl~F~~~v~p~~l~~~~~~~~~g---s~l~Y~YT~ve~A~ 499 (997)
++++||+||||||||++|||||||+|+|+|||++.++.++|++|+++++|+++|+ .++..+ +++||+|||+|+|+
T Consensus 348 ~~v~dC~ir~sl~FPav~SIr~RS~v~G~I~s~~~~~~~~~~~f~~i~~~s~~~~--~~~~~~~~l~~lkY~YTkvd~A~ 425 (909)
T PF11145_consen 348 AGVGDCSIRMSLWFPAVWSIRQRSIVVGQIWSNSQGSSNDPLYFSRIVSPSELFN--SFGNSSSNLSGLKYNYTKVDEAK 425 (909)
T ss_pred cccCCCCceEEEEecCeEEEeecceEEEEEecCCccccCCCcchhheeeeccccc--cccccccCccCceeeeeeHHHHH
Confidence 5679999999999999999999999999999999966779999999999999884 443322 46799999999999
Q ss_pred hhhccCCCCchhhhhhh-ccCCCCCCCCCcccccccccceeeeEeeeccCCCCCCcccceeEEeeeeeecccccccccCC
Q 001909 500 AFQTGSKPSVLGTLLRK-FLAYPSAYDGGISSLSFLADELSLSGCVVPYAIPKAHMQSTCVTVRLHVLSLGSLFGRYWPQ 578 (997)
Q Consensus 500 k~~~r~k~~~~~~~~kk-~~~yP~~~s~~~~S~~~l~~dl~~~~~a~p~~~~~~~~~~~~vt~~~evlslG~l~g~~~~~ 578 (997)
|+|+|+|++++ +|+ +++||++.+ .+|++++..|++++..+.|+ +++++ + ++++||++|+++++.
T Consensus 426 k~~~~~~~~~~---kks~~~~yP~~~~--~~s~sDl~fdl~v~~s~~~~-~~~g~-a--------~plslG~~~~~~~~~ 490 (909)
T PF11145_consen 426 KHCRRNEPSKF---KKSLGLSYPDNLG--NYSSSDLRFDLSVRNSAGPD-LPSGY-A--------SPLSLGSLFGRGDPL 490 (909)
T ss_pred HHHHhcCCccc---ccccCCCCCCccc--cccHhhhcccEEEecccccc-CCCCC-c--------ceEEECchhcccCcc
Confidence 99999999975 333 699998843 35899999999999988887 55666 2 457799999987654
Q ss_pred CCCccccc------cc--ccccccceEEEEEEEEEeccccccee-eeeeeeeeCCCceEEEEeccccchhhhhhhhhccc
Q 001909 579 SCGCHQEV------EQ--SSDFNAQTIEASGHLNIFGEHFNNIS-MSFEGIYDLTAGKMYLVGCRDVRLIQKKIKEEMNL 649 (997)
Q Consensus 579 ~~~~~~~~------~~--~~~~~~~llNVSy~i~~~~~~~~~~s-isaEGvYD~~tG~lcmVGCR~v~~~~~~~~~~~~~ 649 (997)
........ .. .+..+++||||||+|+|+++.+.+.+ |||||||||+||+|||||||+++++|+++.+
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~llNVSy~i~~~~~~~~~~~~isaEGvYD~~~G~lclVGCR~v~~~~~~~~~---- 566 (909)
T PF11145_consen 491 SADDSFSRHAASPSSPEVTEMQHSRLLNVSYEISLSGSISSNSSQISAEGVYDPKTGRLCLVGCRDVRLNWNISSN---- 566 (909)
T ss_pred ccCcccccccccccccccccccccceeEEEEEEEEcccccceEEEEEEEeeeeCCCCeEEEEeccccccCcccccc----
Confidence 43222111 11 13333579999999999999876655 5999999999999999999999999988765
Q ss_pred ccCCceeEEEEEEecCcccccccCceeEEEEeecCCCCCCCCcccccccccceehhhhhhhhhhhhhHHHHHHHHHHHHH
Q 001909 650 ERGMDCQFQVKVEYSPKDARWLKNSEVKISISSKRSKEDPLYFNPVSLKANQIHYDKQLTNMVLRKTFEDILRVLLLIIA 729 (997)
Q Consensus 650 e~~~DC~I~V~vq~pp~~~~~~~~~~~kg~I~S~R~k~DpL~F~~l~l~~~~~~y~~q~~~~i~R~d~E~il~~v~ls~t 729 (997)
|++|||+|+|+|||||+|++ +++|+||+|+|+|+|+|||||+|++|++++++|++|++|+|||||||+||++++++.+
T Consensus 567 ~~~~DC~I~V~vq~pp~~~~--~~~~~kg~I~S~R~~~DpL~F~~~~l~~~~~~~~~q~~~~i~R~d~E~i~~~~s~tl~ 644 (909)
T PF11145_consen 567 ESSMDCEILVTVQFPPLDAK--VNPTIKGSISSTRDKSDPLYFEPLDLSTYPIYYRKQAEESIWRMDLEGIMRVISLTLS 644 (909)
T ss_pred CCCCCeeEEEEEEcCCCCCC--CCCcEEEEEEeccCCCCCccccceeeeeccceeccccchhhhhhhHHHHHHHHHHHHH
Confidence 89999999999999999999 5899999999999999999999999999999998899999999999999775555555
Q ss_pred HHHHhhhhhhhccCCCCcchhHHHHHHHhhhhcccccccccccccccccccccCCceeeeccccccccchhhHHHHHHHH
Q 001909 730 IVCTGSQLQYINHCIDPFSYISLVMIYIPAVDYISPLISNGEIFFKWKSFHAHRNQSYEMMNYDRFRFLGYVIKVLSLYA 809 (997)
Q Consensus 730 l~cv~~QL~h~kk~~~~~P~iSlvML~v~aLGy~~PLvln~EaLF~~~~~~~~~~~~~~l~~~~~le~ne~~vR~ltmvA 809 (997)
++|+++||+|+|||||++|+||||||+|||||||+|||+||||||+.+ +++|++.+++++|+|+||++||++||||
T Consensus 645 ~~~~~~QL~~~k~~~~~~P~iSlvML~v~aLGy~~pLv~n~EaLf~~~----~~~~~~~~~~~~w~e~~e~~vr~ltmvA 720 (909)
T PF11145_consen 645 CVFIGLQLFHVKKHPDVLPYISLVMLGVQALGYMIPLVLNFEALFKSS----HNRQNIFLDSGGWLEVNEVMVRLLTMVA 720 (909)
T ss_pred HHHHHHHHhhhhcCCCccchHhHHHHHHHHHhccchhhcCHHHHcCcC----CCCceEEeecCchhHHHHHHHHHHHHHH
Confidence 555569999999999999999999999999999999999999999955 6789999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccccccCCCCCCccccCCceEEEeehHHHHHhHhheeeeeeccccccCCC-CCccccc-cchhhhH
Q 001909 810 LWLTSNLGKKVSATRVRQMGHGLKQQSRLPNEKKIVLITCAVHVFGFLVTHVIREMNAVETVPA-PDKFVNE-RSKLLEW 887 (997)
Q Consensus 810 flL~lRLlqlvw~aR~~~~~~~~~~~~~~~~ek~vl~~~l~ly~~G~li~l~~h~~~~~~~~~~-~~~~~~~-~~~~~~W 887 (997)
|||||||+|||||||++++++++.+++ |+||||||+|||+|++|+||+|++|..++...+.. +.++... .|+++.|
T Consensus 721 flL~lRL~qlvw~aR~~~~~~~~~~~~--~sek~vl~~~l~ly~~G~li~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (909)
T PF11145_consen 721 FLLQLRLLQLVWSARIRDGARKPLEPW--PSEKKVLYICLPLYIAGGLIALIVHASKTNSRRARREESYDSRISHQQHSW 798 (909)
T ss_pred HHHHHHHHHHHHHhhccccccCCCCCC--CccceEEEEEeHHHHHHHHHhhhhhhhcccccccccccccccccccccccH
Confidence 999999999999999999988777655 99999999999999999999999999987443333 3333333 3665665
Q ss_pred HHHhhhcccccccccchhHhHHhhhcCCCCCcCccceeechhhhhhcccceeeecCcccccccc--CCcccccCCCCCcc
Q 001909 888 LKELDAYLLLVPDFFLLPQIVGNVLWGNKGKPLRKFYYMGLTCLRFLLHIYDYVRDPVLLENYY--GGFDRQKKSLDLNS 965 (997)
Q Consensus 888 ~~dL~sY~GLvlD~FLLPQIi~N~~~~s~~kpLs~~fYvG~T~vRllpH~YD~~r~~~~~~~~~--~s~~ya~~~~Dfys 965 (997)
.+||++|+|||||||||||||+|+||++|||||+++||+|+|++|||||+||++|+|.++ ||| ++|+||||++||||
T Consensus 799 ~~~l~~y~GLv~D~FLLPQii~N~~~~~~~~~Ls~~fY~G~T~~Rllph~Yd~~r~~~~~-~~~~~~~~~ya~~~~dfys 877 (909)
T PF11145_consen 799 WEDLKSYAGLVLDGFLLPQIIGNAFWQSKVKPLSKSFYVGTTLVRLLPHVYDLYRAPNYV-PYFDDESYVYANPRMDFYS 877 (909)
T ss_pred HHHHHHhhhHHHhhhhHHHHHHHHHhccCCcccccceeehHHHHHHHHHHHhhccccccC-cccccccccccCccccccc
Confidence 569999999999999999999999999999999999999999999999999999999999 999 79999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHhhhcCc--ccCC
Q 001909 966 KFGNIAVAVIAILLAMTVYKQQKKIK--ILPL 995 (997)
Q Consensus 966 ~awDi~Ip~~a~llA~~v~lQQr~g~--~~~~ 995 (997)
+||||+|||+|+|||++||+|||||+ ++|.
T Consensus 878 ~awDi~Ip~~a~llA~~v~~QQr~~~~~~~~~ 909 (909)
T PF11145_consen 878 TAWDIVIPCGAVLLAALVYLQQRWGGRCILPM 909 (909)
T ss_pred cccceeeehHHHHHHHHHHHHhhhCCeeeccC
Confidence 99999999999999999999999999 6663
|
|
| >PF11145 DUF2921: Protein of unknown function (DUF2921); InterPro: IPR021319 This eukaryotic family of proteins has no known function | Back alignment and domain information |
|---|
| >KOG0828 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 63.3 bits (153), Expect = 3e-10
Identities = 96/669 (14%), Positives = 188/669 (28%), Gaps = 179/669 (26%)
Query: 131 TARQPFSYR---PGWSPKFRKD-----------PGLSSMTILFEGVYIESEENGGE---- 172
T + Y+ + F + LS I + + + + G
Sbjct: 11 TGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI--DHIIMSKDAVSGTLRLF 68
Query: 173 WLICLLGTSMMPRTNQFLPSWELADMYGYKF------GEHHQPPLIQDDQIMLVLR-YNR 225
W + M+ + F+ E YKF E QP ++ I R YN
Sbjct: 69 WTLLSKQEEMVQK---FV---EEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122
Query: 226 TFSLTTGNIT-GEM-----KSLHEKSDFKYFDGVHLSSHLGLHSKYQFGAEELLSKACSP 279
N++ + ++L E K + + G + C
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKN---------VLIDGVLGSGKTWVALDVCL- 172
Query: 280 YPYQDSLVDEEVILFKDDNICDTLHRYVSRGMFDIMPSWKSVGSNDDANKLGPFILNGTA 339
+V D I F W ++ + + + +L
Sbjct: 173 --------SYKVQCKMDFKI------------F-----WLNLKNCNSPETV-LEMLQKLL 206
Query: 340 KDMDSGSNYFRLNVQNLRCSQGIDENNSNYARVFALFRVIQSWEGEYTSADRTGLSGLTL 399
+D N+ + + I + L R+++S Y + L L L
Sbjct: 207 YQIDP--NWTSRSDHSSNIKLRIHSIQA------ELRRLLKSKP--YENC----L--LVL 250
Query: 400 SAEGIWRSSEGQLCMVGC--------LGVVETSSQRCNSRICL-HFPLTFSITQGTTVFG 450
+ + + C V + S + I L H +T + + ++
Sbjct: 251 --LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 451 TITSISDTDSQTPLWFE-KKTPPDHITS-PKYLKDLGKKWS-YKYSKIMQAKAFQTGS-- 505
D P E T P ++ + ++D W +K+ + S
Sbjct: 309 KYLDCRPQDL--PR--EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 506 --KPSVLGTLLRKFLAYPSAYDGGISS--LSFL------------ADELSLSGCVV---- 545
+P+ + + +P I + LS + ++L V
Sbjct: 365 VLEPAEYRKMFDRLSVFP--PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK 422
Query: 546 --PYAIPKAHMQSTCVT---VRLHVLSLGSLFGRYWPQSCGCHQEVEQSSDFN--AQTIE 598
+IP +++ LH S+ Y ++ I
Sbjct: 423 ESTISIPSIYLELKVKLENEYALH----RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI- 477
Query: 599 ASGHLNIFGEHFNNISMSFEGIYDLTAGKMYLVGCRDVRLIQKKIKEEMNLERGMDCQFQ 658
GH H NI L ++L D R +++KI+ +
Sbjct: 478 --GH------HLKNIEHPER--MTLFR-MVFL----DFRFLEQKIRHD-----STAWNAS 517
Query: 659 VKVEYSPKDARWLKNSEVKISISSKRSKEDPLYFNPVSLKANQI-HYDKQLTNMVLRKTF 717
+ + + LK + I DP Y N I + ++ ++ +
Sbjct: 518 GSILNTLQQ---LKFYKPYI------CDNDPKY----ERLVNAILDFLPKIEENLICSKY 564
Query: 718 EDILRVLLL 726
D+LR+ L+
Sbjct: 565 TDLLRIALM 573
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00