Citrus Sinensis ID: 002030


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------98
MSQSSRDKAAPPGDSKRHVNNNNVHIMPAYPIDDVVSPFGDAAPNISDSELRETAYEILVGACRSTGVRPLTYIPQSERAERTPAPSLSSAPSLQRSLTSTAASKVKKALGMKSIKKRVSGESVGQGKAKRAVTVGELVRAQMRISEQTDSRIRRALLRIAGSQLGKRIETMVLPLELLQQIKPTDFTSQKEYEAWKKRIFKLLEAGLLMHPHLPLDNTSTDARRLRQIIRGAVERPLETGKNYESMQNLRSVVMSLACRSFDGSISEKCHWAEGFPLNLRIYRILLEACFDVNEPTSVIEEVDEVLELIKKTWEILGVNQMLHNLCFGWILFHRYVSTGQVESDLLFAANNLLMEIEKDAKAAKDADYSKILSSILNTILDWAGQRLRDYHDIFHDDNIDSLETVVSLGVLSATILVEGISQEYRGKKNQVDVAHDRVDTYIRSSLRTAFAQKLKKVNSSKKLSKNQPNHLPVLSILAQDVTELAFDEKTIFSPILKRWHPLAAGVAVATLHSCYGNELRQFVSGITELTPDAIQVLLAADKLEKNLVQIAVEDSVDSEDGGKSIIQEMPPYEAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVWNARANKESIAPSAVEVLRTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAKSGCGSRNNFIPTMPALTRCTMGSKFGAFKRKEKLHTAQKRKSQVGTTNGDNSFGVPQLCCRINTFQHIRKELEVLEKKTVHQLRSSHSTRTDNITNGIEKRFELSAASSVEAIQQLSEAIAYKVIFHDLSHVLWDGLYVGEVSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLAGGPSRAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDKFSTSVRSILPLYHNDTESLIEEFKRLTLESYGSSAKSRLPLPPTSGQWNPTEPNTVLRVLCYRSDETAVKFLKKAYNLPKKL
cccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccHHHccHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHccHHHHccccccccccccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEccccccHHHHHHHHHHccccccc
cccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEcccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccHEEHHHHHHHHccHcccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHcccccccHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHcccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEccccHHHHHHHHHHccccccc
msqssrdkaappgdskrhvnnnnvhimpaypiddvvspfgdaapnisdseLRETAYEILVGACrstgvrpltyipqseraertpapslssapslqrsLTSTAASKVKKALGMKSikkrvsgesvgqgkaKRAVTVGELVRAQMRISEQTDSRIRRALLRIAGSQLGKRIETMVLPLellqqikptdftsQKEYEAWKKRIFKLLEAGllmhphlpldntstDARRLRQIIRGAverpletgknyeSMQNLRSVVMSLACrsfdgsisekchwaegfplNLRIYRILLEAcfdvneptsvIEEVDEVLELIKKTWEILGVNQMLHNLCFGWILFHRYVSTGQVESDLLFAANNLLMEIEKDAKAAKDADYSKILSSILNTILDWAGqrlrdyhdifhddnidslETVVSLGVLSATILVEGISqeyrgkknqvdvaHDRVDTYIRSSLRTAFAQKLKKVNsskklsknqpnhlpvLSILAQDVtelafdektifspilkrwhpLAAGVAVATLHSCYGNELRQFVSGITELTPDAIQVLLAADKLEKNLVQIAVedsvdsedggksiiqemppyeAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVWNARANKESIAPSAVEVLRTIDETMEAFfmlpipmhsvllpelisgldgCLQHYVLKAksgcgsrnnfiptmpaltrctmgskfgafkrkeKLHTAQKRksqvgttngdnsfgvpqlccriNTFQHIRKELEVLEKKTVHQlrsshstrtdnitnGIEKRFELSAASSVEAIQQLSEAIAYKVIFHDLSHVLWDGLYvgevsssriEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLaggpsrafthqdsdiIEEDFKFLCDLfwsngdglpadlidkFSTSVRsilplyhndTESLIEEFKRLTLesygssaksrlplpptsgqwnptepntvlRVLCYRSDETAVKFLKKAYNLPKKL
msqssrdkaappgdskrhvnnnNVHIMPAYPIDDVVSPFGDAAPNISDSELRETAYEILVGACRSTGVRPLTYipqseraertpapslssapslqrslTSTAAskvkkalgmksikkrvsgesvgqgkakravtvgelvraqmriseqtdsrIRRALLRIAGSQLGKRIETMVLPLELLQQIKPTDFTSQKEYEAWKKRIFKLLEAGLLMhphlpldntstdaRRLRQIIRgaverpletgknyeSMQNLRSVVMSLACRSFDGSISEKCHWAEGFPLNLRIYRILLEACFDVNEPTSVIEEVDEVLELIKKTWEILGVNQMLHNLCFGWILFHRYVSTGQVESDLLFAANNLLMEIEKDAKAAKDADYSKILSSILNTILDWAGQRLRDYHDIFHDDNIDSLETVVSLGVLSATILVEgisqeyrgkknqvdvahDRVDTYIRSSLRTAFAQKLKKvnsskklsknqpnhlpVLSILAQDVTELAFDEKTIFSPILKRWHPLAAGVAVATLHSCYGNELRQFVSGITELTPDAIQVLLAADKLEKNLVQIAvedsvdsedggKSIIQEMPPYEAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVwnarankesiapsAVEVLRTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAksgcgsrnnFIPTMPALTRCTMGSKFGAFKrkeklhtaqkrksqvgttngdnsfgvPQLCCRINTFQHIRKELEVLekktvhqlrsshstrtdnitngIEKRFELSAASSVEAIQQLSEAIAYKVIFHDLSHVLWDGLYVGEVSSSRIEPFLQELEHYLEIisstvhdrvRTRVITDIMKASFEGFLLVLLAGGPSRAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDKFSTSVRSILPLYHNDTESLIEEFKRLTLESYGSSAKsrlplpptsgqwnptepnTVLRVLCYRSDETAVKFlkkaynlpkkl
MSQSSRDKAAPPGDSKRHVNNNNVHIMPAYPIDDVVSPFGDAAPNISDSELRETAYEILVGACRSTGVRPLTYIPQSERAERTpapslssapslQRSLTSTAASKVKKALGMKSIKKRVSGESVGQGKAKRAVTVGELVRAQMRISEQTDSRIRRALLRIAGSQLGKRIETMVLPLELLQQIKPTDFTSQKEYEAWKKRIFKLLEAGLLMHPHLPLDNTSTDARRLRQIIRGAVERPLETGKNYESMQNLRSVVMSLACRSFDGSISEKCHWAEGFPLNLRIYRILLEACFDVNEPTSvieevdevleliKKTWEILGVNQMLHNLCFGWILFHRYVSTGQVESDLLFAANNLLMEIEkdakaakdadYSKILSSILNTILDWAGQRLRDYHDIFHDDNIDSLETVVSLGVLSATILVEGISQEYRGKKNQVDVAHDRVDTYIRSSLRTAFAQklkkvnsskklsknQPNHLPVLSILAQDVTELAFDEKTIFSPILKRWHPLAAGVAVATLHSCYGNELRQFVSGITELTPDAIQVLLAADKLEKNLVQIAVEDSVDSEDGGKSIIQEMPPYEAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVWNARANKESIAPSAVEVLRTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAKSGCGSRNNFIPTMPALTRCTMGSKFGAFKRKEKLHTAQKRKSQVGTTNGDNSFGVPQLCCRINTFQHIRKELEVLEKKTVHQLRSSHSTRTDNITNGIEKRFELSAASSVEAIQQLSEAIAYKVIFHDLSHVLWDGLYVGEVSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLAGGPSRAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDKFSTSVRSILPLYHNDTESLIEEFKRLTLESYGSSAKSRLPLPPTSGQWNPTEPNTVLRVLCYRSDETAVKFLKKAYNLPKKL
***********************VHIMPAYPIDDVVSPFGDAAPNI**SELRETAYEILVGACRSTGVRPLTYI************************************************************VGELVR***********RIRRALLRIAGSQLGKRIETMVLPLELLQQIKPTDFTSQKEYEAWKKRIFKLLEAGLLMHPHLPLDNTSTDARRLRQIIRGAVERPL****NYESMQNLRSVVMSLACRSFDGSISEKCHWAEGFPLNLRIYRILLEACFDVNEPTSVIEEVDEVLELIKKTWEILGVNQMLHNLCFGWILFHRYVSTGQVESDLLFAANNLLMEIEKDAKAAKDADYSKILSSILNTILDWAGQRLRDYHDIFHDDNIDSLETVVSLGVLSATILVEGISQEYRGKKNQVDVAHDRVDTYIRSSLRTAFA*******************LPVLSILAQDVTELAFDEKTIFSPILKRWHPLAAGVAVATLHSCYGNELRQFVSGITELTPDAIQVLLAADKLEKNLVQIAVE*****************PYEAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVWNARANKESIAPSAVEVLRTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAKSGCGSRNNFIPTMPALTRCTMGSKFGAF***********************SFGVPQLCCRINTFQHIRKELEVLEKKTV********************RFELSAASSVEAIQQLSEAIAYKVIFHDLSHVLWDGLYVGEVSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLAGGPSRAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDKFSTSVRSILPLYHNDTESLIEEFKRLTL*************************NTVLRVLCYRSDETAVKFLKKAY******
*******************************IDDVVSPFGDAAPNISDSELRETAYEILVGACRSTGV*********************************************************************LVRA**********RIRRALLRIAG*QLGKRIETMVLPLELLQQIKPTDFTSQKEYEAWKKRIFKLLEAGLLMHPHL***********************************LRSVVMSLA******SISEKCHWAEGFPLNLRIYRILLEACFDVNEPTSVIEEVDEVLELIKKTWEILGVNQMLHNLCFGWILFHRYVSTGQVESDLLFAANNLLME***********DYSKILSSILNTILDWAGQRLRDYHDIFHDDNIDSLETVVSLGVLSATILV******************DRVDTYIRSSLRTAFAQ******************LPVLSILAQDVTELAFDEKTIFSPILKRWHPLAAGVAVATLHSCYGNELRQFVSGITELTPDAIQVLLAADKLEKNLVQIAVEDSVDSEDGGKSIIQEMPPYEAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVWN*********PSAVEVLRTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAKSGCGSRNNFIPTMPAL************************************FGVPQLCCRINTFQHIRKELEV***************************FELSAASSVEAIQQLSEAIAYKVIFHDLSHVLWDGLYVGEVSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLAGGPSRAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDKFSTSVRSILPLYHNDTESLIEEF***************************TEPNTVLRVLCYRSDETAVKFLKKAYNLP***
***************KRHVNNNNVHIMPAYPIDDVVSPFGDAAPNISDSELRETAYEILVGACRSTGVRPLTYIPQS********************************LGMKSIK***************AVTVGELVRAQMRISEQTDSRIRRALLRIAGSQLGKRIETMVLPLELLQQIKPTDFTSQKEYEAWKKRIFKLLEAGLLMHPHLPLDNTSTDARRLRQIIRGAVERPLETGKNYESMQNLRSVVMSLACRSFDGSISEKCHWAEGFPLNLRIYRILLEACFDVNEPTSVIEEVDEVLELIKKTWEILGVNQMLHNLCFGWILFHRYVSTGQVESDLLFAANNLLMEIEKDAKAAKDADYSKILSSILNTILDWAGQRLRDYHDIFHDDNIDSLETVVSLGVLSATILVEGISQEYRGKKNQVDVAHDRVDTYIRSSLRTAFAQKLKKVNSSKKLSKNQPNHLPVLSILAQDVTELAFDEKTIFSPILKRWHPLAAGVAVATLHSCYGNELRQFVSGITELTPDAIQVLLAADKLEKNLVQIAVEDSVDSEDGGKSIIQEMPPYEAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVWNARANKESIAPSAVEVLRTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAKSGCGSRNNFIPTMPALTRCTMGSKFGAFKRK***************TNGDNSFGVPQLCCRINTFQHIRKELEVLEKK***********RTDNITNGIEKRFELSAASSVEAIQQLSEAIAYKVIFHDLSHVLWDGLYVGEVSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLAGGPSRAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDKFSTSVRSILPLYHNDTESLIEEFKRLTLESYGSSAKSRLPLPPTSGQWNPTEPNTVLRVLCYRSDETAVKFLKKAYNLPKKL
*****************************Y*IDDVVSPFGDAAPNISDSELRETAYEILVGACRSTGVR*************************************************************RAVTVGELVRAQMRISEQTDSRIRRALLRIAGSQLGKRIETMVLPLELLQQIKPTDFTSQKEYEAWKKRIFKLLEAGLLMHPHLPLDNTSTDARRLRQIIRGAVERPLETGKNYESMQNLRSVVMSLACRSFDGSISEKCHWAEGFPLNLRIYRILLEACFDVNEPTSVIEEVDEVLELIKKTWEILGVNQMLHNLCFGWILFHRYVSTGQVESDLLFAANNLLMEIEKDAKAAKDADYSKILSSILNTILDWAGQRLRDYHDIFHDDNIDSLETVVSLGVLSATILVEGISQEYRGKKNQVDVAHDRVDTYIRSSLRTAFAQKLKKVNSSK***KNQPNHLPVLSILAQDVTELAFDEKTIFSPILKRWHPLAAGVAVATLHSCYGNELRQFVSGITELTPDAIQVLLAADKLEKNLVQIAVEDSVDSEDGGKSIIQEMPPYEAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVWNARANKESIAPSAVEVLRTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAKSGCGSRNNFIPTMPALTRCTMGSKFGAFKRKEKL*****************SFGVPQLCCRINTFQHIRKELEVLEKKTVHQ*************NGIEKRFELSAASSVEAIQQLSEAIAYKVIFHDLSHVLWDGLYVGEVSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLAGGPSRAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDKFSTSVRSILPLYHNDTESLIEEFKRLTLESY****************WNPTEPNTVLRVLCYRSDETAVKFLKKAYNLPK**
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MSQSSRDKAAPPGDSKRHVNNNNVHIMPAYPIDDVVSPFGDAAPNISDSELRETAYEILVGACRSTGVRPLTYIPQSERAERTPAPSLSSAPSLQRSLTSTAASKVKKALGMKSIKKRVSGESVGQGKAKRAVTVGELVRAQMRISEQTDSRIRRALLRIAGSQLGKRIETMVLPLELLQQIKPTDFTSQKEYEAWKKRIFKLLEAGLLMHPHLPLDNTSTDARRLRQIIRGAVERPLETGKNYESMQNLRSVVMSLACRSFDGSISEKCHWAEGFPLNLRIYRILLEACFDVNEPTSVIEEVDEVLELIKKTWEILGVNQMLHNLCFGWILFHRYVSTGQVESDLLFAANNLLMEIEKDAKAAKDADYSKILSSILNTILDWAGQRLRDYHDIFHDDNIDSLETVVSLGVLSATILVEGISQEYRGKKNQVDVAHDRVDTYIRSSLRTAFAQKLKKVNSSKKLSKNQPNHLPVLSILAQDVTELAFDEKTIFSPILKRWHPLAAGVAVATLHSCYGNELRQFVSGITELTPDAIQVLLAADKLEKNLVQIAVEDSVDSEDGGKSIIQEMPPYEAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVWNARANKESIAPSAVEVLRTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAKSGCGSRNNFIPTMPALTRCTMGSKFGAFKRKEKLHTAQKRKSQVGTTNGDNSFGVPQLCCRINTFQHIRKELEVLEKKTVHQLRSSHSTRTDNITNGIEKRFELSAASSVEAIQQLSEAIAYKVIFHDLSHVLWDGLYVGEVSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLAGGPSRAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDKFSTSVRSILPLYHNDTESLIEEFKRLTLESYGSSAKSRLPLPPTSGQWNPTEPNTVLRVLCYRSDETAVKFLKKAYNLPKKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query978
225445128975 PREDICTED: uncharacterized protein LOC10 0.982 0.985 0.719 0.0
255546371955 conserved hypothetical protein [Ricinus 0.967 0.990 0.725 0.0
224142191953 predicted protein [Populus trichocarpa] 0.964 0.989 0.716 0.0
225429932985 PREDICTED: uncharacterized protein LOC10 0.967 0.960 0.688 0.0
2960818441002 unnamed protein product [Vitis vinifera] 0.967 0.944 0.676 0.0
224092282994 predicted protein [Populus trichocarpa] 0.974 0.958 0.667 0.0
356507927986 PREDICTED: uncharacterized protein LOC10 0.965 0.957 0.650 0.0
356515615983 PREDICTED: uncharacterized protein LOC10 0.965 0.960 0.650 0.0
449507259987 PREDICTED: LOW QUALITY PROTEIN: uncharac 0.972 0.963 0.653 0.0
449461319992 PREDICTED: uncharacterized protein LOC10 0.972 0.958 0.651 0.0
>gi|225445128|ref|XP_002280525.1| PREDICTED: uncharacterized protein LOC100267936 [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1437 bits (3721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/969 (71%), Positives = 814/969 (84%), Gaps = 8/969 (0%)

Query: 13  GDSKRHVNNNNVHIMPAYPIDDVVSPFGDAAPNISDSELRETAYEILVGACRSTGVRPLT 72
           G+SKRH     V    A    +  +PFG+   ++SDS+LRETAY I VGA RS+G +PLT
Sbjct: 12  GESKRHTTMIMVDGAAAM---EFPNPFGEVGNSLSDSDLRETAYVIFVGAGRSSGGKPLT 68

Query: 73  YIPQSERAERTPAPSLSSAP-SLQRSLTSTAASKVKKALGMKSIKKRVSGE--SVGQGKA 129
           YI QSE+ ER  A S S AP SLQRSLTSTAASKVKKALG+ S  KR + +  S  Q K+
Sbjct: 69  YISQSEKTER--ASSFSGAPPSLQRSLTSTAASKVKKALGLNSSSKRGAAKESSAAQAKS 126

Query: 130 KRAVTVGELVRAQMRISEQTDSRIRRALLRIAGSQLGKRIETMVLPLELLQQIKPTDFTS 189
           K+ VTVGEL+R QMR+SEQTDSRIRR LLRIA  QLG+RIE++VLPLELLQQ K +DF  
Sbjct: 127 KKPVTVGELMRLQMRVSEQTDSRIRRGLLRIAAGQLGRRIESIVLPLELLQQFKSSDFPK 186

Query: 190 QKEYEAWKKRIFKLLEAGLLMHPHLPLDNTSTDARRLRQIIRGAVERPLETGKNYESMQN 249
           Q EYEAW+KR  K+LEAGL++HP+LPLD T T ++RLRQIIRGA+E+P+ETGKN ESMQ 
Sbjct: 187 QPEYEAWQKRNLKVLEAGLVLHPYLPLDKTDTASQRLRQIIRGALEKPIETGKNSESMQV 246

Query: 250 LRSVVMSLACRSFDGSISEKCHWAEGFPLNLRIYRILLEACFDVNEPTSVIEEVDEVLEL 309
           LR+ VMSLACRSFDG  SE CHWA+G PLNLRIY++LLEACFD+N+ TS+IEEVD+VLEL
Sbjct: 247 LRNAVMSLACRSFDGHASETCHWADGSPLNLRIYQMLLEACFDINDETSIIEEVDDVLEL 306

Query: 310 IKKTWEILGVNQMLHNLCFGWILFHRYVSTGQVESDLLFAANNLLMEIEKDAKAAKDADY 369
           IKKTW ILG+NQMLHNLCF W+LFHRY++T QVE+DLLFA NNLLME+EKDAKA KD  Y
Sbjct: 307 IKKTWVILGMNQMLHNLCFAWVLFHRYIATSQVENDLLFAVNNLLMEVEKDAKATKDPVY 366

Query: 370 SKILSSILNTILDWAGQRLRDYHDIFHDDNIDSLETVVSLGVLSATILVEGISQEYRGKK 429
            K LSS L++IL WA +RL  YHD F + +ID ++ VVSLGV +A ILVE IS EYR K+
Sbjct: 367 LKALSSTLSSILVWAEKRLLTYHDTFCNGDIDLMQIVVSLGVTAAKILVEDISHEYRRKR 426

Query: 430 NQVDVAHDRVDTYIRSSLRTAFAQKLKKVNSSKKLSKNQPNHLPVLSILAQDVTELAFDE 489
            +VDVA DRVDTYIRSSLR AFAQ+++KV+S ++LSKN+ N LPVLSILAQD++ELAF+E
Sbjct: 427 KEVDVARDRVDTYIRSSLRAAFAQRMEKVDSMRQLSKNRKNSLPVLSILAQDISELAFNE 486

Query: 490 KTIFSPILKRWHPLAAGVAVATLHSCYGNELRQFVSGITELTPDAIQVLLAADKLEKNLV 549
           K +FSPILK+WHPLAAGVAVATLH+CYGNEL+QFVS I+ELTPDA+QVL +ADKLEK+LV
Sbjct: 487 KGMFSPILKKWHPLAAGVAVATLHACYGNELKQFVSSISELTPDALQVLKSADKLEKDLV 546

Query: 550 QIAVEDSVDSEDGGKSIIQEMPPYEAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVWNA 609
            IAV DSV+SEDGGKSIIQ MPPYEAEA +  L KSWI  R+D LKEWV RNLQQEVWN 
Sbjct: 547 LIAVADSVESEDGGKSIIQAMPPYEAEAVVAKLVKSWIRTRLDILKEWVDRNLQQEVWNP 606

Query: 610 RANKESIAPSAVEVLRTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAKSGCG 669
           +ANKE  APSAVEVLR IDET+EAFF+LPI +H VLLP+L++GLD CLQ Y+ KAKSGCG
Sbjct: 607 QANKERFAPSAVEVLRIIDETVEAFFLLPIQIHPVLLPDLLTGLDRCLQQYISKAKSGCG 666

Query: 670 SRNNFIPTMPALTRCTMGSKFGAFKRKEKLHTAQKRKSQVGTTNGDNSFGVPQLCCRINT 729
           +R+ FIPT+PALTRC+ GSKFGAFK+KEK H AQ+RK+QVGTTNGD SF +PQLC RINT
Sbjct: 667 TRSTFIPTLPALTRCSTGSKFGAFKKKEKPHIAQRRKAQVGTTNGDGSFAIPQLCVRINT 726

Query: 730 FQHIRKELEVLEKKTVHQLRSSHSTRTDNITNGIEKRFELSAASSVEAIQQLSEAIAYKV 789
            QHIRKEL+VLEK+ V  LR+  ST  ++  +G+ KRFELSAA+ +E IQQL EA AYKV
Sbjct: 727 LQHIRKELQVLEKRIVTHLRNCESTHVEDNADGLGKRFELSAAACLEGIQQLCEATAYKV 786

Query: 790 IFHDLSHVLWDGLYVGEVSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEG 849
           IFHDLSHV WDGLYVGEVSSSRIEP LQELE  LEI+S+TVHDRVRTRVITDIM+ASF+G
Sbjct: 787 IFHDLSHVFWDGLYVGEVSSSRIEPLLQELEQILEIVSTTVHDRVRTRVITDIMRASFDG 846

Query: 850 FLLVLLAGGPSRAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDKFSTSVRSILPLYH 909
           FLLVLLAGGPSRAFT QDS+IIEEDFKFL +LFW+NGDGLP +LIDK ST V+SIL L+H
Sbjct: 847 FLLVLLAGGPSRAFTLQDSEIIEEDFKFLMELFWANGDGLPTELIDKHSTIVKSILLLFH 906

Query: 910 NDTESLIEEFKRLTLESYGSSAKSRLPLPPTSGQWNPTEPNTVLRVLCYRSDETAVKFLK 969
           +DTESLI  F+ ++LE+YGSSAKSRLPLPPTSGQWNPTEPNTVLRVLCYR D+ A KFLK
Sbjct: 907 SDTESLIGRFRSVSLETYGSSAKSRLPLPPTSGQWNPTEPNTVLRVLCYRHDDMAAKFLK 966

Query: 970 KAYNLPKKL 978
           K YNLPKKL
Sbjct: 967 KNYNLPKKL 975




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546371|ref|XP_002514245.1| conserved hypothetical protein [Ricinus communis] gi|223546701|gb|EEF48199.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224142191|ref|XP_002324442.1| predicted protein [Populus trichocarpa] gi|222865876|gb|EEF03007.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225429932|ref|XP_002283826.1| PREDICTED: uncharacterized protein LOC100250865 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296081844|emb|CBI20849.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224092282|ref|XP_002309542.1| predicted protein [Populus trichocarpa] gi|222855518|gb|EEE93065.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356507927|ref|XP_003522714.1| PREDICTED: uncharacterized protein LOC100814675 [Glycine max] Back     alignment and taxonomy information
>gi|356515615|ref|XP_003526494.1| PREDICTED: uncharacterized protein LOC100796233 [Glycine max] Back     alignment and taxonomy information
>gi|449507259|ref|XP_004162979.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101217303 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449461319|ref|XP_004148389.1| PREDICTED: uncharacterized protein LOC101217303 [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query978
TAIR|locus:2061619952 AT2G20010 "AT2G20010" [Arabido 0.958 0.984 0.644 0.0
TAIR|locus:2043515987 AT2G25800 "AT2G25800" [Arabido 0.990 0.981 0.612 1.10000010554e-317
TAIR|locus:20183391035 AT1G04470 "AT1G04470" [Arabido 0.872 0.824 0.378 1.1e-168
TAIR|locus:20509971039 AT2G33420 "AT2G33420" [Arabido 0.897 0.845 0.366 1.4e-159
TAIR|locus:21694241101 AT5G06970 "AT5G06970" [Arabido 0.859 0.763 0.311 2.7e-111
TAIR|locus:21397071117 AT4G11670 "AT4G11670" [Arabido 0.828 0.725 0.252 1.1e-64
TAIR|locus:2061619 AT2G20010 "AT2G20010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3096 (1094.9 bits), Expect = 0., P = 0.
 Identities = 619/961 (64%), Positives = 743/961 (77%)

Query:    32 IDDVVSPFGDAAPNISDSELRETAYEILVGACRSTGVRPLTYIPQSERAERTXXXXXXXX 91
             ++ + SPFGD APN+S+SELRETAYEILV ACRSTG RPLTYIPQS +++R+        
Sbjct:     1 MESLPSPFGDPAPNLSNSELRETAYEILVAACRSTGSRPLTYIPQSPKSDRSNGLTTASL 60

Query:    92 X---XXQRSLTSTAASKVKKALGMKSIKKRV------SGESVGQ-GKAKRAVTVGELVRA 141
                    RSLTSTAASKVKKALGMK   KR+      +GES  Q  ++K++VTVGELVR 
Sbjct:    61 SPSPSLHRSLTSTAASKVKKALGMK---KRIGDGDGGAGESSSQPDRSKKSVTVGELVRV 117

Query:   142 QMRISEQTDSRIRRALLRIAGSQLGKRIETMVLPLELLQQIKPTDFTSQKEYEAWKKRIF 201
             QMRISEQ DSRIRRALLRIA  QLG+R+E MVLPLELLQQ+K +DF  Q+EYE+W++R  
Sbjct:   118 QMRISEQIDSRIRRALLRIASGQLGRRVEMMVLPLELLQQLKASDFPDQEEYESWQRRNL 177

Query:   202 KLLEAGLLMHPHLPLDNTSTDARRLRQIIRGAVERPLETGKNYESMQNLRSVVMSLACRS 261
             KLLEAGL+++P +PL  +    ++L+QIIR  +ERPL+TGK     QNLRS+VMSLA R 
Sbjct:   178 KLLEAGLILYPCVPLSKSDKSVQQLKQIIRSGLERPLDTGKITGETQNLRSLVMSLASRQ 237

Query:   262 FDGSI-SEKCHWAEGFPLNLRIYRILLEACFDVNEPTSXXXXXXXXXXXXKKTWEILGVN 320
              +  I SE CHWA+GFPLNLRIY++LLE+CFDVN+               KKTW +LG+N
Sbjct:   238 NNNGIGSETCHWADGFPLNLRIYQMLLESCFDVNDELLIVEEVDEVLELIKKTWPVLGIN 297

Query:   321 QMLHNLCFGWILFHRYVSTGQVESDLLFAANNLLMEIEXXXXXXXXXXYSKILSSILNTI 380
             QM+HN+CF W+L +RYVSTGQVE+DLL AA+NL++EIE          YSKILSS+L+ +
Sbjct:   298 QMIHNVCFLWVLVNRYVSTGQVENDLLVAAHNLILEIENDAMETNDPEYSKILSSVLSLV 357

Query:   381 LDWAGQRLRDYHDIFHDDNIDSLETVVSLGVLSATILVEGISQEYRGKKNQVDVAHDRVD 440
             +DW  +RL  YHD F+ DN+++LET VSLG+L A +L E IS EYR KK  VD   DRVD
Sbjct:   358 MDWGEKRLLAYHDTFNIDNVETLETTVSLGILVAKVLGEDISSEYRRKKKHVDSGRDRVD 417

Query:   441 TYIRSSLRTAFAQXXXXXXXXXXXXXXQP-NHLPVLSILAQDVTELAFDEKTIFSPILKR 499
             TYIRSSLR AF Q              Q  N+LP L+ILA+D+  LAF+EK IFSPILK 
Sbjct:   418 TYIRSSLRMAFQQTKRMVEHSKKSKSRQSTNNLPALAILAEDIGHLAFNEKAIFSPILKN 477

Query:   500 WHPLAAGVAVATLHSCYGNELRQFVSGITELTPDAIQVLLAADKLEKNLVQIAVEDSVDS 559
             WHPLAAGVA ATLHSCYG EL++FVSGITELTPDAI+VL AADKLEK+LVQIAV+D+VDS
Sbjct:   478 WHPLAAGVAAATLHSCYGTELKKFVSGITELTPDAIRVLTAADKLEKDLVQIAVQDAVDS 537

Query:   560 EDGGKSIIQEMPPYEAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVWNARANKESIAPS 619
             EDGGKS+I+EMPP+EAE  IGNL KSWI IRVDRLKEW+ RNLQQEVWN R+NK  IAPS
Sbjct:   538 EDGGKSVIREMPPFEAEVVIGNLVKSWIKIRVDRLKEWIDRNLQQEVWNPRSNKLGIAPS 597

Query:   620 AVEVLRTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAKSGCGSRNNFIPTMP 679
             AV+VLR +DET+EAFF+LPI +H VLLPEL SGLD C+QHYV KAKS CGSRN F+P +P
Sbjct:   598 AVDVLRMVDETLEAFFLLPILLHPVLLPELTSGLDKCMQHYVSKAKSSCGSRNTFLPVLP 657

Query:   680 ALTRCTMGSKF-GAFKRKEK-LHTAQKRKSQVGTTNGDNSFGVPQLCCRINTFQHIRKEL 737
             ALTRCT+GS+  G FK+KEK +  + +RKSQ+GT  G++S  + Q CCRINT Q+IR E+
Sbjct:   658 ALTRCTVGSRLHGVFKKKEKPMVASHRRKSQLGT--GNDSAEILQFCCRINTLQYIRTEI 715

Query:   738 EVLEKKTVHQLRSSHSTRTDNITNGIEKRFELSAASSVEAIQQLSEAIAYKVIFHDLSHV 797
             E   +KT+++L  S     D    G  K FE S +   + IQQLSEA AYK++FHDLS+V
Sbjct:   716 ESSGRKTLNRLPESEVAALD--AKG--KIFEQSISYCSKGIQQLSEATAYKIVFHDLSNV 771

Query:   798 LWDGLYVGEVSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLAG 857
             LWDGLY+GEV SSRIEPFLQELE  LEIISS+VHDRVRTRVI+DIM+ASF+GFLLVLLAG
Sbjct:   772 LWDGLYLGEVPSSRIEPFLQELERCLEIISSSVHDRVRTRVISDIMRASFDGFLLVLLAG 831

Query:   858 GPSRAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDKFSTSVRSILPLYHNDTESLIE 917
             GPSR FT QDS  +EEDFKFLCDLFWSNGDGLP DLI+K ST+V+SILPL   DT+SLIE
Sbjct:   832 GPSRGFTIQDSAAVEEDFKFLCDLFWSNGDGLPLDLIEKVSTTVKSILPLLRTDTDSLIE 891

Query:   918 EFKRLTLESYGSSAKSRLPLPPTSGQWNPTEPNTVLRVLCYRSDETAVKFLKKAYNLPKK 977
              FK + LE++GS  + +LPLPPTSG W+PTEPNT+LRVLCYR DE A KFLKK YNLP+K
Sbjct:   892 RFKAVCLENHGSD-RGKLPLPPTSGPWSPTEPNTLLRVLCYRYDEPATKFLKKTYNLPRK 950

Query:   978 L 978
             L
Sbjct:   951 L 951




GO:0003674 "molecular_function" evidence=ND
GO:0005739 "mitochondrion" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
GO:0000165 "MAPK cascade" evidence=RCA
GO:0006499 "N-terminal protein myristoylation" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0007154 "cell communication" evidence=RCA
GO:0009409 "response to cold" evidence=RCA
GO:0009723 "response to ethylene stimulus" evidence=RCA
GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0035556 "intracellular signal transduction" evidence=RCA
GO:0043069 "negative regulation of programmed cell death" evidence=RCA
GO:0048193 "Golgi vesicle transport" evidence=RCA
GO:0048527 "lateral root development" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
GO:0052542 "defense response by callose deposition" evidence=RCA
TAIR|locus:2043515 AT2G25800 "AT2G25800" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018339 AT1G04470 "AT1G04470" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050997 AT2G33420 "AT2G33420" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169424 AT5G06970 "AT5G06970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139707 AT4G11670 "AT4G11670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query978
pfam05664677 pfam05664, DUF810, Protein of unknown function (DU 0.0
pfam10540119 pfam10540, Membr_traf_MHD, Munc13 (mammalian uncoo 0.002
>gnl|CDD|218680 pfam05664, DUF810, Protein of unknown function (DUF810) Back     alignment and domain information
 Score =  772 bits (1995), Expect = 0.0
 Identities = 354/720 (49%), Positives = 462/720 (64%), Gaps = 65/720 (9%)

Query: 45  NISDSELRETAYEILVGACRSTGVRPLTYIPQSERAERTPAPSLSSAPSLQRSLTSTAAS 104
            +SD +LRETAYEILV ACRS+   PL Y  + +++E+                     S
Sbjct: 1   GLSDDDLRETAYEILVAACRSS--GPLIYPSKEKKSEK---------------------S 37

Query: 105 KVKKALGMKSIKKRVSGESVGQ-GKAKRAVTVGELVRAQMRISEQTDSRIRRALLRIAGS 163
           +VKKALG+K      SG S  Q  +++R VT  E++R QMRISEQ DSRIRR LLR A  
Sbjct: 38  RVKKALGLKR---SKSGSSSSQPQRSRRPVTQLEIMRIQMRISEQMDSRIRRGLLRAAVG 94

Query: 164 QLGKRIETMVLPLELLQQIKPTDFTSQKEYEAWKKRIFKLLEAGLLMHPHLPLDNTSTDA 223
           Q+G+R E++VLPLELLQQ+K ++F   KEYEAW+KR  KLLE GL++HP +PLD ++  A
Sbjct: 95  QVGRREESIVLPLELLQQLKASEFPDPKEYEAWQKRQLKLLEEGLILHPCVPLDKSNRSA 154

Query: 224 RRLRQIIRG-----AVERPLETGKNYESMQNLRSVVMSLACR-SFDGSISEKCHWAEGFP 277
           +RLR+IIR      ++ RP +T K  E +++LRSVVMSLA R S  G   + CHWA+G+P
Sbjct: 155 QRLREIIRAIDESDSLPRPTDTNKRSEILRSLRSVVMSLAWRPSRGGMTGDSCHWADGYP 214

Query: 278 LNLRIYRILLEACFDVNEPTSVIEEVDEVLELIKKTWEILGVNQMLHNLCFGWILFHRYV 337
           LN+R+Y  LLEA FD  +  S+ EEVDE+LEL+KKTW ILG+ + +HN+C  W LF +YV
Sbjct: 215 LNIRLYEKLLEAVFDQVDDGSLAEEVDEILELLKKTWSILGITETIHNVCLAWALFRQYV 274

Query: 338 STGQVESDLLFAANNLLMEIEKDAKA-AKDADYSK------------ILSSILNTILDWA 384
            TG  E DLL AA   L E+  DAK   K+A Y K            +L+S L++IL W+
Sbjct: 275 VTG--EPDLLAAAIAQLAEVALDAKRGTKEALYLKSLARSVTTIHSPLLASALSSILGWS 332

Query: 385 GQRLRDYHDIFHDDNIDSLETVVSLGVLSATILVEGISQEYRGKKNQVDVAHDRVDTYIR 444
            +RL DYHD F + NI  +E +VS+   +A IL E IS E R  + +   A DR+D YIR
Sbjct: 333 EKRLLDYHDTFDEGNIGVMEDIVSIAYSAARILGEDISAELR--RARKTCARDRIDEYIR 390

Query: 445 SSLRTAFAQKLKKVNSSKKLSKNQPNHLPVLSILAQDVTELAFDEKTIFSPILKRWHPLA 504
           SSL+ AFA+      +         N L VL+ LA++  +LA  E   FSPILKRWHP A
Sbjct: 391 SSLKNAFAKD-----AKVADGDATTNPLHVLAQLAEETADLAKKELERFSPILKRWHPQA 445

Query: 505 AGVAVATLHSCYGNELRQFVSGITELTPDAIQVLLAADKLEKNLVQIAVEDSVDSEDGGK 564
           AGVA ATLH CYGN+L+QF++G TELT DA++VL AADKLEK LVQIA   +VD +DGGK
Sbjct: 446 AGVAAATLHKCYGNDLKQFLAGGTELTEDAVEVLWAADKLEKALVQIA---AVDCDDGGK 502

Query: 565 SIIQEMPPYEAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVWNARANKESIAPSAVEVL 624
           ++I+EM PYE E+ IGNL K+WIN ++DRLKEWV R ++QE W  ++N +  APSAVEVL
Sbjct: 503 AVIREMEPYEVESVIGNLVKTWINEKIDRLKEWVDRAIEQETWKPKSNDQRYAPSAVEVL 562

Query: 625 RTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAKSGCGSRNNFIPTMPALTRC 684
           R ++ET++ FF LPIP H  LL  L  G+D   Q Y  K  S  GSR + +P +P LTRC
Sbjct: 563 RIVEETLDGFFGLPIPAHVSLLRALTEGIDAAFQKYTSKVVSSLGSREDLVPPLPPLTRC 622

Query: 685 TMGSKF-GAFKRKEK-LHTAQKRKSQVGTTNGDNSFGVPQLCCRINTFQHIRKELEVLEK 742
              S     +K+K K      +RKSQ          GVP LC R+NT  ++R +L  LEK
Sbjct: 623 KKASGIVDLWKKKFKPSSPPDERKSQNID-----ELGVPALCVRLNTLHYLRSQLSSLEK 677


This family consists of several plant proteins of unknown function. Length = 677

>gnl|CDD|220800 pfam10540, Membr_traf_MHD, Munc13 (mammalian uncoordinated) homology domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 978
PF05664677 DUF810: Protein of unknown function (DUF810); Inte 100.0
KOG1011 1283 consensus Neurotransmitter release regulator, UNC- 99.95
KOG1328 1103 consensus Synaptic vesicle protein BAIAP3, involve 99.75
PF10540137 Membr_traf_MHD: Munc13 (mammalian uncoordinated) h 99.68
PF06046566 Sec6: Exocyst complex component Sec6; InterPro: IP 98.9
KOG2180793 consensus Late Golgi protein sorting complex, subu 97.97
KOG2286667 consensus Exocyst complex subunit SEC6 [Intracellu 96.94
PF04091311 Sec15: Exocyst complex subunit Sec15-like ; InterP 96.58
PF04437494 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 96.38
COG5173742 SEC6 Exocyst complex subunit SEC6 [Intracellular t 94.78
KOG35431218 consensus Ca2+-dependent activator protein [Signal 93.7
>PF05664 DUF810: Protein of unknown function (DUF810); InterPro: IPR008528 This family consists of several plant proteins of unknown function Back     alignment and domain information
Probab=100.00  E-value=3.8e-203  Score=1779.25  Aligned_cols=658  Identities=55%  Similarity=0.897  Sum_probs=621.8

Q ss_pred             CCCchhHHHHHHHHHHHHHhcCCCCCcccccCcccccCCCCCCCCCCcccccccchhhhhHHHHHhCCccccccCCCCcc
Q 002030           45 NISDSELRETAYEILVGACRSTGVRPLTYIPQSERAERTPAPSLSSAPSLQRSLTSTAASKVKKALGMKSIKKRVSGESV  124 (978)
Q Consensus        45 ~ls~~dlRetAYEi~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~k~~lgl~~~~~~~~~~~~  124 (978)
                      ||||||||||||||||||||+|||  ++|++++. ++                    ..||+||+||||++++.+  ++.
T Consensus         1 ~ls~~dlRetAYEi~~a~~~~s~~--~~~~~~~~-~~--------------------~~s~~k~~lgl~~~~~~~--~~~   55 (677)
T PF05664_consen    1 GLSDDDLRETAYEILLASCRSSGG--LIYFSQSK-KK--------------------EKSRVKKALGLKSSKSGS--SVS   55 (677)
T ss_pred             CCCHHHHHHHHHHHHHHHHhccCC--CccCcccc-cc--------------------chhHHHHHhcCCCCCCCC--CCC
Confidence            799999999999999999999965  88877332 11                    138999999999988532  445


Q ss_pred             CCCCCCCcchHHHHHHHHhhchhhhhHHHHHHHHHHHHhhhccccccccccHHhhcccCCCCCCCHHHHHHHHHHHHHHH
Q 002030          125 GQGKAKRAVTVGELVRAQMRISEQTDSRIRRALLRIAGSQLGKRIETMVLPLELLQQIKPTDFTSQKEYEAWKKRIFKLL  204 (978)
Q Consensus       125 ~~~~~~~~~~~~e~mR~qm~vse~~D~r~Rr~L~r~~~gq~g~r~~~~~lpLeLL~~~~~sdF~d~~ey~~Wq~Rql~vL  204 (978)
                      +++++|||+|++||||+||||||++|+||||+|||+++||+|||+|+|+|||||||++|+|||+|++||++|||||||+|
T Consensus        56 ~~~~~~~~~~~~e~~r~qm~vse~~d~r~r~~l~~~~~~~~g~r~e~~~lpLeLl~~~~~sdF~d~~ey~~WqkRql~~L  135 (677)
T PF05664_consen   56 SPGRPRRPMTSAEIMRVQMRVSEQMDARIRRALLRAAAGQVGRRAESIVLPLELLQQLKPSDFSDEKEYEQWQKRQLKVL  135 (677)
T ss_pred             CCCCCCCcchHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccccccccHHHHhhCCHhhCCCHHHHHHHHHHHHHHH
Confidence            66799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhCCCCCCCCCChhHHHHHHHHHh-----cccCCCCCCcchHHHHHHHHHHHHhhccc-CCCCCCCcccccCCCCc
Q 002030          205 EAGLLMHPHLPLDNTSTDARRLRQIIRG-----AVERPLETGKNYESMQNLRSVVMSLACRS-FDGSISEKCHWAEGFPL  278 (978)
Q Consensus       205 E~gLl~hp~~p~d~~~~~a~~lr~~~~~-----~~~~~~~~~~~se~m~~l~~~~~sLa~r~-~~g~~~e~chWadgypL  278 (978)
                      ||||++||++|+|++|.+|++||+++++     ++.+|++||+|+|+||+||++|++||||+ .+|.++|+|||||||||
T Consensus       136 e~gL~~hp~~~l~~s~~~a~~lr~~~~~~~~~~~~~~~~~~~~~se~~~~l~~~~~~La~r~~~~~~~~e~chWadgypl  215 (677)
T PF05664_consen  136 EAGLLNHPSVPLDKSNASAQRLRQIIAKIREDEAEDKPIDTGKNSESMRALRSAVISLAWRPSRDGSSGETCHWADGYPL  215 (677)
T ss_pred             HHHHHhCcCCCccccchhHHHHHHHHHhcccccccCCcCccccccHHHHHHHHHHHHHhcCCCCCCCCCcccccccCCCc
Confidence            9999999999999999999999999999     99999999999999999999999999995 57778999999999999


Q ss_pred             cHHHHHHHHHhhhccCCCCchhhhHHHHHHhHHhhhhhhccchHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHH
Q 002030          279 NLRIYRILLEACFDVNEPTSVIEEVDEVLELIKKTWEILGVNQMLHNLCFGWILFHRYVSTGQVESDLLFAANNLLMEIE  358 (978)
Q Consensus       279 N~~LYe~LL~~~FD~~de~~v~eE~dE~leliK~TW~~LGI~~~lHn~cf~WvlF~qyv~Tgq~e~~LL~aa~~~l~ev~  358 (978)
                      |+||||+||++|||++|||+|+||+||+||+||+||++||||||+||+||+||||||||+||  |++||+||+++|+||+
T Consensus       216 N~~LYe~LL~~~FD~~de~~vidE~dEvlellK~tW~~LGIt~~lHn~cf~WVlF~qyv~tg--e~~LL~~a~~~L~ev~  293 (677)
T PF05664_consen  216 NVRLYEKLLFSVFDILDEGQVIDEVDEVLELLKKTWSILGITQTLHNVCFAWVLFRQYVATG--EPDLLKAAIQQLQEVA  293 (677)
T ss_pred             cHHHHHHHHHHHhcccccchHHhhHHHHHHHHHHHhHHhCCCHHHHHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999  7999999999999999


Q ss_pred             HHhh-hhcCcchHH------------HHHHHHHHHHHHHHHhhhhhhhhccCCchhhHhHHHHHHHHHhhhhhcchhhhh
Q 002030          359 KDAK-AAKDADYSK------------ILSSILNTILDWAGQRLRDYHDIFHDDNIDSLETVVSLGVLSATILVEGISQEY  425 (978)
Q Consensus       359 ~dak-~~~d~~y~~------------~l~s~L~~i~~W~ekrL~dYH~~f~~~~~~~me~~~sl~~~a~kil~ed~~~~~  425 (978)
                      +|++ .++||.|.+            +|+|+|++|++|+||||+|||+||++|+++.||++|+|++.+++||+||++.++
T Consensus       294 ~d~~~~~~~~~y~~sl~~~~~~~~l~ll~s~L~si~~W~ekrL~dYH~~f~~~~~~~me~llsl~~~a~~il~ed~~~~~  373 (677)
T PF05664_consen  294 KDAKRATKDPLYLKSLRCSVETSDLSLLSSVLSSIQGWAEKRLLDYHDHFSEGNIGVMEGLLSLAVSAAKILGEDVSREY  373 (677)
T ss_pred             HhccccccchhhhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHHHhhchhHHH
Confidence            9999 599999998            999999999999999999999999999998999999999999999999999777


Q ss_pred             ccccCccccchhhHHHHHHhhHHHHHHHHHhhhccccccccCCCCchHHHHHHHHHHHHHHhhhhhccccchhhhcchhH
Q 002030          426 RGKKNQVDVAHDRVDTYIRSSLRTAFAQKLKKVNSSKKLSKNQPNHLPVLSILAQDVTELAFDEKTIFSPILKRWHPLAA  505 (978)
Q Consensus       426 ~~~~~~~~~~~~rid~yI~sS~~~af~~~~e~~~~~~~~~~~~~~~~~~L~~LA~~~~~la~~e~~~fSPiL~~whp~A~  505 (978)
                      +...+.  +++++||+||+|||++||+|+++..+.+.     +.++.|+|++||+||++||.+|+++|||+|++|||.|+
T Consensus       374 ~~~~~~--~~~~~ie~YIrsSi~~Af~~~~~~~~~~~-----~~~~~~~L~~LA~ei~~la~~e~~~FsPiLk~whP~a~  446 (677)
T PF05664_consen  374 RRKRSK--VARSRIESYIRSSIKAAFARMASSVDSRS-----DSEPSHVLAQLAKEIKELAKKEKEVFSPILKRWHPNAA  446 (677)
T ss_pred             Hhhhcc--chHHHHHHHHHHHHHHHHHhhhhhhhhcc-----cccchHHHHHHHHHHHHHHHHhHHhcCchhcccCchHH
Confidence            654322  78999999999999999999998888775     89999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhHHHHHhhhhccChhHHhhchhhhHHHHHHHHHHhhccccCCCCcccccccCCCchhhhhhHHHHHH
Q 002030          506 GVAVATLHSCYGNELRQFVSGITELTPDAIQVLLAADKLEKNLVQIAVEDSVDSEDGGKSIIQEMPPYEAEAAIGNLAKS  585 (978)
Q Consensus       506 ~vAa~~Lh~~Yg~~Lk~~L~~v~~lt~d~~~vl~aAd~LE~~L~~i~~e~s~~~~dggk~~~r~m~PyeiE~~~~~lV~~  585 (978)
                      +|||++||+|||++|||||+++++||+|+++||++||+|||+|+||+   +++|+||||+++|+|+||++|+++.+||++
T Consensus       447 ~VAa~~LH~~Yg~~Lk~~L~~~~~LT~d~v~VL~aA~~LEk~Lvq~~---~~~~edggk~~~rem~Py~vE~~i~~lv~~  523 (677)
T PF05664_consen  447 GVAAATLHSCYGNELKQFLSGVTHLTPDVVEVLQAADKLEKALVQMV---SVDCEDGGKSLIREMPPYEVESLISNLVKR  523 (677)
T ss_pred             HHHHHHHHHHHHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHHH---HhhccccccccccCCCceeHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998   778899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhccccccCCCCCCCCccHHHHHHHHHHHHHHHhcCCCCccccchHHHHHhHHHHHHHHHHHHH
Q 002030          586 WINIRVDRLKEWVCRNLQQEVWNARANKESIAPSAVEVLRTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAK  665 (978)
Q Consensus       586 Wi~~~~~ki~ewV~raiq~E~W~P~s~~e~hS~SVVDvFrmi~Etvd~ff~L~~p~~~~lL~~Ls~Gid~~lq~Y~~~v~  665 (978)
                      ||+++++++.+||+||+++|+|+|++++++||+|||||||||+||||+||+||||+++.+|++|++||+++||+||++|+
T Consensus       524 Wi~~~~~~l~ewv~ra~~qE~W~P~S~~e~hs~SvVEvfri~~eTvd~ff~L~~~~~~~~l~~L~~gld~~lq~Y~~~v~  603 (677)
T PF05664_consen  524 WIQEQLERLNEWVDRAIKQEKWNPRSKEERHSPSVVEVFRIFNETVDQFFQLPWPMHADFLQALSKGLDKALQRYCEKVE  603 (677)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCCcCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCCCCCCCCCcccccccCcchhhhhhhccccccccccCcCCCCCCCCCCCcccceeecccHHHHHHHHHHHHH
Q 002030          666 SGCGSRNNFIPTMPALTRCTMGSKFGAFKRKEKLHTAQKRKSQVGTTNGDNSFGVPQLCCRINTFQHIRKELEVLEK  742 (978)
Q Consensus       666 ~~~gske~~iP~~P~LTR~~~eskf~~~~KKa~~~~~~~e~~~~g~~~~~~s~~~~~LCVrLNnLeyil~qLd~LEk  742 (978)
                      ++||++++|+|++|+||||+++++|+++|||+.++.....++..   .+.+++++|++|||||||||+++||++|||
T Consensus       604 ~~~gsk~~liP~~P~LTR~~~~sk~~~~~Kk~~~~~~~~~~~~~---~~~~~~~~~~lcVrLNtL~yil~qL~~LEK  677 (677)
T PF05664_consen  604 QSCGSKQSLIPPLPPLTRCKKDSKFKKLWKKKWKSSTNPDERFS---SKINSQFTPRLCVRLNTLEYILSQLDKLEK  677 (677)
T ss_pred             HhcccccccCCCCchhhhhhhhhhHHHHHHHHhcCccccccccc---cCcccCccCceeeeecHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999998555432222211   335589999999999999999999999996



>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] Back     alignment and domain information
>PF10540 Membr_traf_MHD: Munc13 (mammalian uncoordinated) homology domain; InterPro: IPR019558 Mammalian uncoordinated homology 13 (Munc13) proteins constitute a family of three highly homologous molecules (Munc13-1, Munc13-2 and Munc13-3) with homology to Caenorhabditis elegans unc-13p Back     alignment and domain information
>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex Back     alignment and domain information
>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2286 consensus Exocyst complex subunit SEC6 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane Back     alignment and domain information
>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases Back     alignment and domain information
>COG5173 SEC6 Exocyst complex subunit SEC6 [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query978
3swh_A341 MUNC13-1, protein UNC-13 homolog A; alpha helical, 7e-30
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 2e-05
>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus} Length = 341 Back     alignment and structure
 Score =  120 bits (302), Expect = 7e-30
 Identities = 49/366 (13%), Positives = 120/366 (32%), Gaps = 70/366 (19%)

Query: 584 KSWINIRVDRLKEWVCRNLQQ---EVWNARANKESIAPSAVEVLRTIDETMEAFFMLPIP 640
             W++   +  ++++   L++   + +   +     + S V+V   ++++ E    L  P
Sbjct: 16  IQWLDENEEVSRDFLHGALERDKKDGFQQTSEHALFSCSVVDVFSQLNQSFEIIKKLECP 75

Query: 641 ---MHSVLLPELISGLDGCLQHYVLKAKSGCGSRNNFIPTMPALTRCTMGSKFGAFKRKE 697
              +    +      +   L  Y                         +   F ++  KE
Sbjct: 76  DPQIVGHYMRRFAKTISNVLLQYA----------------------DIVSKDFASYCSKE 113

Query: 698 KLHTAQKRKSQVGTTNGDNSFGVPQLCCRINTFQHIRKELEVLEKKTVHQLRSSHSTRTD 757
           K                         C  +N  Q +R +LE + +    +   + ++ T 
Sbjct: 114 KE---------------------KVPCILMNNTQQLRVQLEKMFEAMGGKELDAEASGTL 152

Query: 758 N-----ITNGIEKRFELSAASSVEAIQQLSEAIA--YKVIFHDLSHVLWDGLYVGEVSSS 810
                 + N +++   + A S    I++    +      +    +        V + + +
Sbjct: 153 KELQVKLNNVLDELSHVFATSFQPHIEECVRQMGDILSQVKGTGNVPASACSSVAQDADN 212

Query: 811 RIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLAGG------------ 858
            ++P +  L+  L + +      V  RV+ ++ K         ++               
Sbjct: 213 VLQPIMDLLDSNLTLFAKICEKTVLKRVLKELWKLVMNTMERTIVLPPEFSKLKDHMVRE 272

Query: 859 PSRAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDKFST--SVRSILPLYHNDTESLI 916
            +++ T +   ++E     +   F + G GL    ++K     S+R  L LY   T+ LI
Sbjct: 273 EAKSLTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDLLI 332

Query: 917 EEFKRL 922
           + F + 
Sbjct: 333 KTFVQT 338


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query978
3swh_A341 MUNC13-1, protein UNC-13 homolog A; alpha helical, 100.0
2fji_1399 Exocyst complex component SEC6; exocytosis, tandem 98.98
2a2f_X325 Exocyst complex component SEC15; all helical struc 95.57
3hr0_A263 COG4; conserved oligomeric golgi complex, intracel 94.96
>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus} Back     alignment and structure
Probab=100.00  E-value=1.4e-40  Score=369.53  Aligned_cols=293  Identities=16%  Similarity=0.281  Sum_probs=224.1

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHhhhhccccccCC---CCCCCCccHHHHHHHHHHHHHHHhcCCCCc---cccchHH
Q 002030          575 AEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVWNARA---NKESIAPSAVEVLRTIDETMEAFFMLPIPM---HSVLLPE  648 (978)
Q Consensus       575 iE~~~~~lV~~Wi~~~~~ki~ewV~raiq~E~W~P~s---~~e~hS~SVVDvFrmi~Etvd~ff~L~~p~---~~~lL~~  648 (978)
                      .+.+|.++|++|+++..+++.+||++|++.|+|+|.+   ++.+||+||||+|++|+|+++.+.+|.||+   ...|++.
T Consensus         7 ~~~wF~~~V~~Wl~~~~~k~~~~v~~Ai~~Dk~~~~~~~~~~~~hSsSvvDif~~~~Q~~~~~~~L~WpD~~~~~~f~t~   86 (341)
T 3swh_A            7 YPAWFEPFVIQWLDENEEVSRDFLHGALERDKKDGFQQTSEHALFSCSVVDVFSQLNQSFEIIKKLECPDPQIVGHYMRR   86 (341)
T ss_dssp             --CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSSSCCSCTHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccCccccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence            4679999999999999999999999999999999986   677999999999999999999999999997   4579999


Q ss_pred             HHHhHHHHHHHHHHHHHhccCCCCCCCCCCCcccccccCcchhhhhhhccccccccccCcCCCCCCCCCCCcccceeecc
Q 002030          649 LISGLDGCLQHYVLKAKSGCGSRNNFIPTMPALTRCTMGSKFGAFKRKEKLHTAQKRKSQVGTTNGDNSFGVPQLCCRIN  728 (978)
Q Consensus       649 Ls~Gid~~lq~Y~~~v~~~~gske~~iP~~P~LTR~~~eskf~~~~KKa~~~~~~~e~~~~g~~~~~~s~~~~~LCVrLN  728 (978)
                      |++.|.+++..||+.+..                      +|..+..+        +             +...+||.+|
T Consensus        87 l~~~i~~~~~~Y~~~l~~----------------------~~~~~~~~--------e-------------~~~~~Cv~lN  123 (341)
T 3swh_A           87 FAKTISNVLLQYADIVSK----------------------DFASYCSK--------E-------------KEKVPCILMN  123 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHH----------------------HHHHHCCT--------T-------------SCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH----------------------HHHhhhhh--------h-------------cccchhhhcc
Confidence            999999999999999954                      23221000        0             1235899999


Q ss_pred             cHHHHHHHHHHHHHHHHhhhccCCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHHhhhhhhh------cccchhhHhhh
Q 002030          729 TFQHIRKELEVLEKKTVHQLRSSHSTRTDNITNGIEKRFELSAASSVEAIQQLSEAIAYKVIF------HDLSHVLWDGL  802 (978)
Q Consensus       729 nLeyil~qLd~LEk~I~~~w~~~~S~~~~~~~~~~~~~F~~ar~sl~~ai~~l~e~ia~rvVF------~Dl~~~l~d~L  802 (978)
                      |++|++.+|++|.+.+.  |.        .+....+...+..+..++..+++++...+.++.-      .-|...+.. +
T Consensus       124 Nie~lR~~L~~l~~~l~--~~--------~l~~~~~~~~~~lq~~l~~vl~~l~~~~~~~~~~~i~~~v~~m~~~l~~-i  192 (341)
T 3swh_A          124 NTQQLRVQLEKMFEAMG--GK--------ELDAEASGTLKELQVKLNNVLDELSHVFATSFQPHIEECVRQMGDILSQ-V  192 (341)
T ss_dssp             HHHHHHHHHHHHHHHTT--TT--------TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-C
T ss_pred             cHHHHHHHHHHHHHhcc--hh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-h
Confidence            99999999999999772  22        1233556677889999999999998888877521      111111111 0


Q ss_pred             c-cCcc-----------ccccchhhHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHH------------hCCC
Q 002030          803 Y-VGEV-----------SSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVL------------LAGG  858 (978)
Q Consensus       803 Y-~g~V-----------~~~RI~p~L~~Ld~~L~~l~~~l~d~~r~~vv~~vmkAs~dafL~VL------------L~GG  858 (978)
                      - .|.+           .+.+|+|+++|||++|..++++++++++++|++++|++++++|+.++            ++||
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~ai~PLm~yLd~~L~~l~~~L~~~~f~rvL~~lW~~~l~~l~~~i~lP~~~~~~~~~~~~~  272 (341)
T 3swh_A          193 KGTGNVPASACSSVAQDADNVLQPIMDLLDSNLTLFAKICEKTVLKRVLKELWKLVMNTMERTIVLPPEFSKLKDHMVRE  272 (341)
T ss_dssp             C-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCSSSCC----
T ss_pred             cccccCCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhhhHhhhccc
Confidence            0 0111           25689999999999999999999999999999999999999999988            6999


Q ss_pred             CCCCCCccchHHHHHHHHHHHHhcccCCCCCcHHHHHH--HHHhHhhhccccccChHHHHHHHHH
Q 002030          859 PSRAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDK--FSTSVRSILPLYHNDTESLIEEFKR  921 (978)
Q Consensus       859 psR~Fs~~D~~miEeDl~~LKd~F~a~GeGLp~e~Ve~--~a~~v~~Vl~L~~~~Te~LIe~f~~  921 (978)
                      +.|.|+++++++++++|+.|++||||+|+|||.+.+|+  +++.++++|.||.++|+.||+.|..
T Consensus       273 ~~r~~~~~~~~~l~~~L~~L~~fFhA~G~GL~~~~Leks~~~~~l~~~L~L~~~~T~~LI~~f~~  337 (341)
T 3swh_A          273 EAKSLTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDLLIKTFVQ  337 (341)
T ss_dssp             ------CTTHHHHHHHHHHHHHHHHGGGTSCCHHHHHTCHHHHHHHHHHHHC-------------
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHhccCCCCCCHHHHccChhHHHHHHHHHHhcCCHHHHHHHHHh
Confidence            99999999999999999999999999999999999997  7999999999999999999999854



>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster} Back     alignment and structure
>3hr0_A COG4; conserved oligomeric golgi complex, intracellular trafficking, vesicle tethering, multisubunit tethering complex, exocyst; 1.90A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00