Citrus Sinensis ID: 002292


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940
MDRRRSHTISTFSFFICLLLLFQASSSYGSPSRKSGRSSVFSLFNLRERSRFWSESVIRGDFDDLQSSSPGRVGVLNYTRAGNIANYLKLMEVDSMYLPVPVNFIFIGFEGNGNQDFQLHPDELERWFLKIDHIFEHTRVPPIGEVLAPFYRTSVDKVQRHHLPTISHINYNFSVHAIQMGEKVTSVFEHAIKVLARKDDVSTNRDDVDALWQVDVSMMDVLFTSLVDYLQLENAYNIFILNPKHEKRARYGYRRGLSDSEITFLKENKDLQTKILQSGNIPESILALDKIRRPLYEKHPMMKFSWTIAEDTDTAEWYNICLDPLNNVEKFYRGKETADIIQSKVLQLLKGKNEDLKFLLEKELKSGDLSNLHAECLTDSWIGNNRWAFIDLTAGPFSWGPAVGGEGVRTELSLPNVGKTIGAVEEISEDEAEDRLQDAIQEKFAVFGDKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDLKNELQSFEGEEYDENHKRKAIEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHVISPSIADGAFHYYETISFQLFFITQEKVRQVKQLPVNLKSLMDGLSSLLLPSQKPVFSQRMLTLSEDPALAMAFSVARRAAAVPMLLVNGTYRKTVRSYVDSAILQYQLQRMNDRDSLKGAHAHSRSTLEVPIFWFIHGDPLLVDKHYQAKALSDMVIVVQSEEPSWESHLQCNGQSLLWDLRSPIKAALASVSEHLAGLLPLHLVYSQAHETAIEDWIWSVGCNPFSITSQGWHISQFQSDTIARSYIISTLEESIQTVNSAIHLLLMERTTEKTFKLFQSQERELVNKYNYVVSLWRRISTVTGDLRYADAMRQLYTLEDASKGFVDQVNATIALLHPIHCTRDRKVDVEFDLTTIPAFLIVLGILYVLLKPRRPKPKIN
ccccccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEccccccccccccccccccccccccccccccHHHHHcccccHHHHcccccccEEEEEEEEEEEEEEEcccccccccccHHHHHHHHHHccHHcccccccccccccccccccccccccccccccEEEEEEEEEEEEEEccHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccHHHHHHHHHccHHHHHHHHccccccccccHHHHcccccccccccccccccccccccHHHHHHHcccccHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHHHHccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEcccccccccccccEEEEEEEEEEEccccccccccccHHHHHHHHccccccccEEEEEEccccccccHHHHHHHHHHHHcccccEEEEccEEEEEEEEEEcHHHHHHHHHHccccccccccccccccEEEEEEEEEEccccccccccccccccccEEEEEEcccccccccEEEcccEEEEEccccHHHHHHHHHHHHcccccccccccccccccccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEHHHHHHHHHHEEEEEcccccccccc
ccccccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEEccccccccccHHHHccccHHccccccccHHHHHHHccccHHHHccccEccEEEEEccEEEEEEEEcccccccccccHHHHHHHHHHHccccccccccccccccccccEEcccccccccccccEEEEEEEEEEEEEccHHHHHHHHHHHHHHcccccccccccccccEEEccHHHHHHHHHHHHHHHcccccEEEEEEcccccccccEcEcccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcccccHcccccccEcccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccHHHcEEEEEccccEEEEEccccccccccccccccEEEccccccHHHHccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEEcccccccccccccHHHHHHHHHHccccccEEEEEEEEEEccccHHHHHHHHHHHHHcccccccccccEEEEEHHHccHHHHHHHHHHHccccHcccccccccEEEEEEEEEEcccccEEEccccEEEEcccEEEEEEEcccccEEEEEEcccEEEEccccHHHHHHHHHHHHHHccccccccccHHccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHcEEcccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEHHHHHHHHHHHHHHHHHHHHcccccccccc
mdrrrshtisTFSFFICLLLLFQAsssygspsrksgrssvFSLFNLrersrfwsesvirgdfddlqssspgrvgvlnytragNIANYLKLMevdsmylpvpvnfifigfegngnqdfqlhPDELERWFLKIDHIfehtrvppigevlapfyrtsvdkvqrhhlptishinYNFSVHAIQMGEKVTSVFEHAIKVLArkddvstnrddvdaLWQVDVSMMDVLFTSLVDYLQLENAynifilnpkhekrarygyrrglsdseITFLKENKDLQTKIlqsgnipesILALDKIrrplyekhpmmkfswtiaedtdtaewyNICLDPLNNVEKFYRGKETADIIQSKVLQLLKGKNEDLKFLLEKElksgdlsnlhaecltdswignnrwafidltagpfswgpavggegvrtelslpnvgktigaveeiseDEAEDRLQDAIQEKFAVFGDKDHQAIDILLAEIDIYELFAfkhckgrkVKLALCEELDERMQDLKNELQsfegeeydenHKRKAIEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWGsmrhvispsiadgafhyyETISFQLFFITQEKVRQVKQLPVNLKSLMDGLsslllpsqkpvfsqrmltlsedPALAMAFSVARRAAAVPMLLVNGTYRKTVRSYVDSAILQYQLQRMndrdslkgahahsrstlevpifwfihgdpllvdkHYQAKALSDMVIVVQseepsweshlqcNGQSLLWDLRSPIKAALASVSEHLAGLLPLHLVYSQAHETAIEDWiwsvgcnpfsitsqgwhisqfqSDTIARSYIISTLEESIQTVNSAIHLLLMERTTEKTFKLFQSQERELVNKYNYVVSLWRRISTVTGDLRYADAMRQLYTLEDASKGFVDQVNATIALLhpihctrdrkvdvefdlTTIPAFLIVLGILYVllkprrpkpkin
mdrrrshtisTFSFFICLLLLFQASSSygspsrksgrssVFSLFNLRersrfwsesvirgdfddlqssspgrvgvlnytrAGNIANYLKLMEVDSMYLPVPVNFIFIGFEGNGNQDFQLHPDELERWFLKIDHIFEHTRVPPIGEVLAPFYRTSVDKVQRHHLPTISHINYNFSVHAIQMGEKVTSVFEHAIKVlarkddvstnrdDVDALWQVDVSMMDVLFTSLVDYLQLENAYNifilnpkhekrARYGYRRGLSDSEITFLKENKDLQTkilqsgnipesilALDKIRRPLYEKHPMMKFSWTIAEDTDTAEWYNICLDPLNNVEKFYRGKETADIIQSKVLQLLKGKNEDLKFLLEKELKSGDLSNLHAECLTDSWIGNNRWAFIDLTAGPFSWGPAVGGEgvrtelslpnvGKTIGAVEEISEDEAEDRLQDAIQEKFAVFGDKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDLKNELqsfegeeydenHKRKAIEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHVISPSIADGAFHYYETISFQLFFITQEKVRQVKQLPVNLKSLMDGLSSLLLPSQKPVFSQRMLTLSEDPALAMAFSVARRAAAVPMLLVNGTYRKTVRSYVDSAILQYQLQRMNDRDSLKGAHAHSRSTLEVPIFWFIHGDPLLVDKHYQAKALSDMVIVVQSEEPSWESHLQCNGQSLLWDLRSPIKAALASVSEHLAGLLPLHLVYSQAHETAIEDWIWSVGCNPFSITSQGWHISQFQSDTIARSYIISTLEESIQTVNSAIHLLLMERTTEKTFKLFQSQERELVNKYNYVVSLWRRISTVTGDLRYADAMRQLYTLEDASKGFVDQVNATIALLHPIHCTRDRKVDVEFDLTTIPAFLIVLGILyvllkprrpkpkin
MDRRRSHTISTFSFFICLLLLFQAsssygspsrksgrssvfsLFNLRERSRFWSESVIRGDFDDLQSSSPGRVGVLNYTRAGNIANYLKLMEVDSMYLPVPVNFIFIGFEGNGNQDFQLHPDELERWFLKIDHIFEHTRVPPIGEVLAPFYRTSVDKVQRHHLPTISHINYNFSVHAIQMGEKVTSVFEHAIKVLARKDDVSTNRDDVDALWQVDVSMMDVLFTSLVDYLQLENAYNIFILNPKHEKRARYGYRRGLSDSEITFLKENKDLQTKILQSGNIPESILALDKIRRPLYEKHPMMKFSWTIAEDTDTAEWYNICLDPLNNVEKFYRGKETADIIQSKVLQLLKGknedlkfllekelkSGDLSNLHAECLTDSWIGNNRWAFIDLTAGPFSWGPAVGGEGVRTELSLPNVGKTIGAVEEISEDEAEDRLQDAIQEKFAVFGDKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDLKNELQSFEGEEYDENHKRKAIEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHVISPSIADGAFHYYETISFQLFFITQEKVRQVKQLPVNLKSLMDGLSSLLLPSQKPVFSQRMLTLSEDPalamafsvarraaavPMLLVNGTYRKTVRSYVDSAILQYQLQRMNDRDSLKGAHAHSRSTLEVPIFWFIHGDPLLVDKHYQAKALSDMVIVVQSEEPSWESHLQCNGQSLLWDLRSPIKAALASVSEHLAGLLPLHLVYSQAHETAIEDWIWSVGCNPFSITSQGWHISQFQSDTIARSYIISTLEESIQTVNSAIHLLLMERTTEKTFKLFQSQERELVNKYNYVVSLWRRISTVTGDLRYADAMRQLYTLEDASKGFVDQVNATIALLHPIHCTRDRKVDVEFDLTTIPAFLIVLGILYVLLKPRRPKPKIN
********ISTFSFFICLLLLFQA***************VFSLFNLRERSRFWSESVIRGDFDDL*****GRVGVLNYTRAGNIANYLKLMEVDSMYLPVPVNFIFIGFEGNGNQDFQLHPDELERWFLKIDHIFEHTRVPPIGEVLAPFYRTSVDKVQRHHLPTISHINYNFSVHAIQMGEKVTSVFEHAIKVLARKDDVSTNRDDVDALWQVDVSMMDVLFTSLVDYLQLENAYNIFILNPKHEKRARYGYRRGLSDSEITFLKENKDLQTKILQSGNIPESILALDKIRRPLYEKHPMMKFSWTIAEDTDTAEWYNICLDPLNNVEKFYRGKETADIIQSKVLQLLKGKNEDLKFLLEKELKSGDLSNLHAECLTDSWIGNNRWAFIDLTAGPFSWGPAVGGEGVRTELSLPNVGKTIGAV*************DAIQEKFAVFGDKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEEL***************************IEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHVISPSIADGAFHYYETISFQLFFITQEKVRQVKQLPVNLKSLMDGLSSLLLPSQKPVFSQRMLTLSEDPALAMAFSVARRAAAVPMLLVNGTYRKTVRSYVDSAILQYQLQRM*************RSTLEVPIFWFIHGDPLLVDKHYQAKALSDMVIVVQSEEPSWESHLQCNGQSLLWDLRSPIKAALASVSEHLAGLLPLHLVYSQAHETAIEDWIWSVGCNPFSITSQGWHISQFQSDTIARSYIISTLEESIQTVNSAIHLLLMERTTEKTFKLFQSQERELVNKYNYVVSLWRRISTVTGDLRYADAMRQLYTLEDASKGFVDQVNATIALLHPIHCTRDRKVDVEFDLTTIPAFLIVLGILYVLLK*********
**********TFSFFICLLLLFQ******************SLFNLRERSRFWSESVIRGDFDDLQ***P**VGVLNYTRAGNIANYLKLMEVDSMYLPVPVNFIFIGFEGNGNQDFQLHPDELERWFLKIDHIFEHTRVPPIGEVLAPFYRT*V******HLPTISHINYNFSVHAIQMGEKVTSVFEHAIKVLARKDD**********LWQVDVSMMDVLFTSLVDYLQLENAYNIFILNPKHEKRARYGYRRGLSDSEITFLKENKD*******************KI****Y****************DTAEWYNICLDPLNNVEKFYRGKETADIIQSKVLQLLKGKNEDLKFLLEKELKSGDLSNLHAECLTDSWIGNNRWAFIDLTAGPFSWGPAVGGEGVRTELSLPNVGKTIG****************AIQEKFAVFGDKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDL********************IEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHVISPSIADGAFHYYETISFQLFFITQEKVR***QLPVNLKSLMD************VFSQRMLTLSEDPALAM*******************YRKTVRSYVDSAILQYQL******************TLEVPIFWFIHGDPLLVDKHYQAKALSDMVIVVQSEE*************LLWDLRSPIKAALASVSEHLAGLLPLHLVYSQAHETAIEDWIWSVGCNPFSITSQGWHISQFQSDTIARSYIISTLEESIQTVNSAIHLLLMERTTE**********RELVNKYNYVVSLWRRISTVTGDLRYADAMRQLYTLEDASKGFVDQVNATIALLHPIHCTRDRKVDVEFDLTTIPAFLIVLGILYVLLKPRRPKP***
********ISTFSFFICLLLLFQASS************SVFSLFNLRERSRFWSESVIRGDFDDLQSSSPGRVGVLNYTRAGNIANYLKLMEVDSMYLPVPVNFIFIGFEGNGNQDFQLHPDELERWFLKIDHIFEHTRVPPIGEVLAPFYRTSVDKVQRHHLPTISHINYNFSVHAIQMGEKVTSVFEHAIKVLARKDDVSTNRDDVDALWQVDVSMMDVLFTSLVDYLQLENAYNIFILNPKHEKRARYGYRRGLSDSEITFLKENKDLQTKILQSGNIPESILALDKIRRPLYEKHPMMKFSWTIAEDTDTAEWYNICLDPLNNVEKFYRGKETADIIQSKVLQLLKGKNEDLKFLLEKELKSGDLSNLHAECLTDSWIGNNRWAFIDLTAGPFSWGPAVGGEGVRTELSLPNVGKTIGAVEEISEDEAEDRLQDAIQEKFAVFGDKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDLKNELQSFEGEEYDENHKRKAIEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHVISPSIADGAFHYYETISFQLFFITQEKVRQVKQLPVNLKSLMDGLSSLLLPSQKPVFSQRMLTLSEDPALAMAFSVARRAAAVPMLLVNGTYRKTVRSYVDSAILQYQLQRMND**********SRSTLEVPIFWFIHGDPLLVDKHYQAKALSDMVIVVQSEEPSWESHLQCNGQSLLWDLRSPIKAALASVSEHLAGLLPLHLVYSQAHETAIEDWIWSVGCNPFSITSQGWHISQFQSDTIARSYIISTLEESIQTVNSAIHLLLMERTTEKTFKLFQSQERELVNKYNYVVSLWRRISTVTGDLRYADAMRQLYTLEDASKGFVDQVNATIALLHPIHCTRDRKVDVEFDLTTIPAFLIVLGILYVLLKPRRPKPKIN
*******TISTFSFFICLLLLFQASS***********SSVFSLFNLRERSRFWSESVIRGDFDDLQSSSPGRVGVLNYTRAGNIANYLKLMEVDSMYLPVPVNFIFIGFEGNGNQDFQLHPDELERWFLKIDHIFEHTRVPPIGEVLAPFYRTSVDKVQRHHLPTISHINYNFSVHAIQMGEKVTSVFEHAIKVLARKDDVSTNRDDVDALWQVDVSMMDVLFTSLVDYLQLENAYNIFILNPKHEKRARYGYRRGLSDSEITFLKENKDLQTKILQSGNIPESILALDKIRRPLYEKHPMMKFSWTIAEDTDTAEWYNICLDPLNNVEKFYRGKETADIIQSKVLQLLKGKNEDLKFLLEKELKSGDLSNLHAECLTDSWIGNNRWAFIDLTAGPFSWGPAVGGEGVRTELSLPNVGKTIGAVEEISEDEAEDRLQDAIQEKFAVFGDKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDLKNELQSFEGEEYDENHKRKAIEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHVISPSIADGAFHYYETISFQLFFITQEKVRQVKQLPVNLKSLMDGLSSLLLPSQKPVFSQRMLTLSEDPALAMAFSVARRAAAVPMLLVNGTYRKTVRSYVDSAILQYQLQRMNDRDSLKGAHAHSRSTLEVPIFWFIHGDPLLVDKHYQAKALSDMVIVVQSEEPSWESHLQCNGQSLLWDLRSPIKAALASVSEHLAGLLPLHLVYSQAHETAIEDWIWSVGCNPFSITSQGWHISQFQSDTIARSYIISTLEESIQTVNSAIHLLLMERTTEKTFKLFQSQERELVNKYNYVVSLWRRISTVTGDLRYADAMRQLYTLEDASKGFVDQVNATIALLHPIHCTRDRKVDVEFDLTTIPAFLIVLGILYVLLKPRRP*****
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiii
iiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDRRRSHTISTFSFFICLLLLFQASSSYGSPSRKSGRSSVFSLFNLRERSRFWSESVIRGDFDDLQSSSPGRVGVLNYTRAGNIANYLKLMEVDSMYLPVPVNFIFIGFEGNGNQDFQLHPDELERWFLKIDHIFEHTRVPPIGEVLAPFYRTSVDKVQRHHLPTISHINYNFSVHAIQMGEKVTSVFEHAIKVLARKDDVSTNRDDVDALWQVDVSMMDVLFTSLVDYLQLENAYNIFILNPKHEKRARYGYRRGLSDSEITFLKENKDLQTKILQSGNIPESILALDKIRRPLYEKHPMMKFSWTIAEDTDTAEWYNICLDPLNNVEKFYRGKETADIIQSKVLQLLKGKNEDLKFLLEKELKSGDLSNLHAECLTDSWIGNNRWAFIDLTAGPFSWGPAVGGEGVRTELSLPNVGKTIGAVEEISEDEAEDRLQDAIQEKFAVFGDKDHQAIDILLAEIDIYELFAFKHCKGxxxxxxxxxxxxxxxxxxxxxxxxxxxxEYDENHKRKAIEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHVISPSIADGAFHYYETISFQLFFITQEKVRQVKQLPVNLKSLMDGLSSLLLPSQKPVFSQRMLTLSEDPALAMAFSVARRAAAVPMLLVNGTYRKTVRSYVDSAILQYQLQRMNDRDSLKGAHAHSRSTLEVPIFWFIHGDPLLVDKHYQAKALSDMVIVVQSEEPSWESHLQCNGQSLLWDLRSPIKAALASVSEHLAGLLPLHLVYSQAHETAIEDWIWSVGCNPFSITSQGWHISQFQSDTIARSYIISTLEESIQTVNSAIHLLLMERTTEKTFKLFQSQERELVNKYNYVVSLWRRISTVTGDLRYADAMRQLYTLEDASKGFVDQVNATIALLHPIHCTRDRKVDVEFDLTTIPAFLIVLGILYVLLKPRRPKPKIN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query940
359483090980 PREDICTED: uncharacterized protein LOC10 0.977 0.937 0.830 0.0
255573801985 conserved hypothetical protein [Ricinus 0.939 0.896 0.841 0.0
224087367949 predicted protein [Populus trichocarpa] 0.988 0.978 0.793 0.0
297793327945 hypothetical protein ARALYDRAFT_918999 [ 0.997 0.992 0.758 0.0
42568619945 uncharacterized protein [Arabidopsis tha 0.994 0.989 0.760 0.0
449442649957 PREDICTED: uncharacterized protein LOC10 0.968 0.950 0.786 0.0
9759536932 unnamed protein product [Arabidopsis tha 0.970 0.978 0.734 0.0
356495039948 PREDICTED: uncharacterized protein LOC10 0.984 0.975 0.761 0.0
356527439956 PREDICTED: uncharacterized protein LOC10 0.978 0.962 0.754 0.0
297745112 1177 unnamed protein product [Vitis vinifera] 0.724 0.578 0.850 0.0
>gi|359483090|ref|XP_002274115.2| PREDICTED: uncharacterized protein LOC100255062 [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1628 bits (4216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 766/922 (83%), Positives = 852/922 (92%), Gaps = 3/922 (0%)

Query: 22  FQASSSYGSP--SRKSGRSSVFSLFNLRERSRFWSESVIRGDFDDLQSSSPGRVGVLNYT 79
           F A  SYGSP  +RK+GRSSVFSLFNL+E+SRFWSE+V+  DF+DL+S++ G++GVLNYT
Sbjct: 59  FLAGRSYGSPIGTRKTGRSSVFSLFNLKEKSRFWSENVMHSDFNDLESANNGKMGVLNYT 118

Query: 80  RAGNIANYLKLMEVDSMYLPVPVNFIFIGFEGNGNQDFQLHPDELERWFLKIDHIFEHTR 139
            AGNIANYLKL+EVDS++LPVPVNFIFIGFEG GN +F+LHP+ELERWF KIDHIF HTR
Sbjct: 119 EAGNIANYLKLLEVDSIHLPVPVNFIFIGFEGKGNHEFKLHPEELERWFTKIDHIFGHTR 178

Query: 140 VPPIGEVLAPFYRTSVDKVQRHHLPTISHINYNFSVHAIQMGEKVTSVFEHAIKVLARKD 199
           VP IGEVL PFY+ S+DKVQRHHLP +SHINYN SVHAIQM EKVTSVF++AI VLAR+D
Sbjct: 179 VPHIGEVLTPFYKISIDKVQRHHLPIVSHINYNVSVHAIQMSEKVTSVFDNAINVLARRD 238

Query: 200 DVSTNRDDVDALWQVDVSMMDVLFTSLVDYLQLENAYNIFILNPKHE-KRARYGYRRGLS 258
           DVS NR+D D  WQVDV MMDVLF+SLVDYLQLENAYNIF+LNPKH+ K+A+YGYRRGLS
Sbjct: 239 DVSGNREDEDTFWQVDVDMMDVLFSSLVDYLQLENAYNIFVLNPKHDGKKAKYGYRRGLS 298

Query: 259 DSEITFLKENKDLQTKILQSGNIPESILALDKIRRPLYEKHPMMKFSWTIAEDTDTAEWY 318
           +SEI FLKENKDLQTKILQSG IPES+LAL+KI+RPLYEKHPM KF+WTI EDTDT EW 
Sbjct: 299 ESEINFLKENKDLQTKILQSGTIPESVLALEKIKRPLYEKHPMEKFAWTITEDTDTVEWS 358

Query: 319 NICLDPLNNVEKFYRGKETADIIQSKVLQLLKGKNEDLKFLLEKELKSGDLSNLHAECLT 378
           NICLD LNNV++FY+GK+TADII  KV+Q+LKGKNED+K L  KELKSGDLS +HAECLT
Sbjct: 359 NICLDALNNVDRFYQGKDTADIIHGKVIQILKGKNEDMKQLFGKELKSGDLSGIHAECLT 418

Query: 379 DSWIGNNRWAFIDLTAGPFSWGPAVGGEGVRTELSLPNVGKTIGAVEEISEDEAEDRLQD 438
           D+WIG +RWAFIDL+AGPFSWGPAVGGEGVRTELSLPNV KTIGAV EISEDEAEDRLQD
Sbjct: 419 DTWIGKDRWAFIDLSAGPFSWGPAVGGEGVRTELSLPNVKKTIGAVAEISEDEAEDRLQD 478

Query: 439 AIQEKFAVFGDKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDLKNELQ 498
           AIQEKFA FGDKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERM+DLKNELQ
Sbjct: 479 AIQEKFAAFGDKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQ 538

Query: 499 SFEGEEYDENHKRKAIEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHV 558
           SFEG EYDE+H+RKA++AL RME+WNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRH+
Sbjct: 539 SFEGGEYDESHRRKAVDALNRMESWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHI 598

Query: 559 ISPSIADGAFHYYETISFQLFFITQEKVRQVKQLPVNLKSLMDGLSSLLLPSQKPVFSQR 618
           ISPSIADGAFH+Y+ ISFQLFFITQEKVR +KQLPV+LK+L +GLSSLLLPSQK +FSQ 
Sbjct: 599 ISPSIADGAFHFYDKISFQLFFITQEKVRHIKQLPVDLKALTEGLSSLLLPSQKAMFSQH 658

Query: 619 MLTLSEDPALAMAFSVARRAAAVPMLLVNGTYRKTVRSYVDSAILQYQLQRMNDRDSLKG 678
           ML LSEDPALAMAFSVARRAAAVP+LLVNGTYRKT+R+Y+DS+ILQ+QLQR+ND  SLKG
Sbjct: 659 MLPLSEDPALAMAFSVARRAAAVPLLLVNGTYRKTIRTYLDSSILQHQLQRLNDHGSLKG 718

Query: 679 AHAHSRSTLEVPIFWFIHGDPLLVDKHYQAKALSDMVIVVQSEEPSWESHLQCNGQSLLW 738
            HAHSRSTLEVPIFWF+H +PLLVDKHYQAKALSDMVIVVQSE  SWESHLQCNG+SLLW
Sbjct: 719 MHAHSRSTLEVPIFWFLHSEPLLVDKHYQAKALSDMVIVVQSETSSWESHLQCNGKSLLW 778

Query: 739 DLRSPIKAALASVSEHLAGLLPLHLVYSQAHETAIEDWIWSVGCNPFSITSQGWHISQFQ 798
           DLR PIKAALA+ SEHLAGLLPLHLVYSQAHETAIEDW WSVGCNP SITSQGWHISQFQ
Sbjct: 779 DLRRPIKAALAAASEHLAGLLPLHLVYSQAHETAIEDWAWSVGCNPLSITSQGWHISQFQ 838

Query: 799 SDTIARSYIISTLEESIQTVNSAIHLLLMERTTEKTFKLFQSQERELVNKYNYVVSLWRR 858
           SDT+ARSYII+TLEESIQ VNSAIH L+ME TTE+TFKLFQSQER+LVNKYN+VV LWRR
Sbjct: 839 SDTVARSYIITTLEESIQLVNSAIHRLVMEHTTEQTFKLFQSQERDLVNKYNHVVGLWRR 898

Query: 859 ISTVTGDLRYADAMRQLYTLEDASKGFVDQVNATIALLHPIHCTRDRKVDVEFDLTTIPA 918
           I+TVTG+LRY DAMR LYTLEDASKGFV QVNA+I LLHPIHCTR RKVDVEFD+TTIPA
Sbjct: 899 IATVTGELRYVDAMRLLYTLEDASKGFVGQVNASITLLHPIHCTRQRKVDVEFDMTTIPA 958

Query: 919 FLIVLGILYVLLKPRRPKPKIN 940
           FLIVLG+L+++L+PRRPKPKIN
Sbjct: 959 FLIVLGVLWLVLRPRRPKPKIN 980




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255573801|ref|XP_002527820.1| conserved hypothetical protein [Ricinus communis] gi|223532794|gb|EEF34572.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224087367|ref|XP_002308138.1| predicted protein [Populus trichocarpa] gi|222854114|gb|EEE91661.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297793327|ref|XP_002864548.1| hypothetical protein ARALYDRAFT_918999 [Arabidopsis lyrata subsp. lyrata] gi|297310383|gb|EFH40807.1| hypothetical protein ARALYDRAFT_918999 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|42568619|ref|NP_200618.3| uncharacterized protein [Arabidopsis thaliana] gi|332009614|gb|AED96997.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449442649|ref|XP_004139093.1| PREDICTED: uncharacterized protein LOC101207480 [Cucumis sativus] Back     alignment and taxonomy information
>gi|9759536|dbj|BAB11002.1| unnamed protein product [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356495039|ref|XP_003516388.1| PREDICTED: uncharacterized protein LOC100779643 [Glycine max] Back     alignment and taxonomy information
>gi|356527439|ref|XP_003532318.1| PREDICTED: uncharacterized protein LOC100800000 [Glycine max] Back     alignment and taxonomy information
>gi|297745112|emb|CBI38951.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query940
TAIR|locus:2155846945 AT5G58100 [Arabidopsis thalian 0.994 0.989 0.722 0.0
DICTYBASE|DDB_G02850831020 DDB_G0285083 [Dictyostelium di 0.267 0.246 0.323 6.2e-61
TAIR|locus:2098423687 AT3G28720 "AT3G28720" [Arabido 0.293 0.401 0.247 3.7e-12
DICTYBASE|DDB_G0273745808 DDB_G0273745 "transmembrane pr 0.237 0.275 0.236 6.4e-10
DICTYBASE|DDB_G0273189808 DDB_G0273189 "transmembrane pr 0.237 0.275 0.236 6.4e-10
DICTYBASE|DDB_G0279945641 DDB_G0279945 [Dictyostelium di 0.397 0.583 0.218 1.2e-09
TAIR|locus:2155846 AT5G58100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3632 (1283.6 bits), Expect = 0., P = 0.
 Identities = 678/938 (72%), Positives = 789/938 (84%)

Query:     6 SHTISTFSFFICLLLLF--QAXXXXXXXXXXXXXXXXXXLFNLRERSRFWSESVIRGDFD 63
             + ++S     IC+ +LF                      LFNLR++SRFWSESV R DFD
Sbjct:     8 NRSVSKLVLTICVAILFIPSLSYGASQGNRKTAKSSVFSLFNLRDKSRFWSESVFRTDFD 67

Query:    64 DLQSSSPGRVGVLNYTRAGNIANYLKLMEVDSMYLPVPVNFIFIGFEGNGNQDFQLHPDE 123
             DL+SS     GVLNYT++GNIA+YL+LMEVDS+YLPVPVNFIFIGFEG GNQDF+L P+E
Sbjct:    68 DLESSVHSNSGVLNYTKSGNIASYLELMEVDSVYLPVPVNFIFIGFEGKGNQDFKLRPEE 127

Query:   124 LERWFLKIDHIFEHTRVPPIGEVLAPFYRTSVDKVQRHHLPTISHINYNFSVHAIQMGEK 183
             LERWF K+DH+FEHTRVP I EVL PFY+ +++K  +HHLP IS +NYNFSVHAIQMGEK
Sbjct:   128 LERWFNKLDHMFEHTRVPQIKEVLNPFYKINIEKEVQHHLPIISRVNYNFSVHAIQMGEK 187

Query:   184 VTSVFEHAIKVLARKDDVSTNRDDVDALWQVDVSMMDVLFTSLVDYLQLENAYNIFILNP 243
             VTSV EHAIKVLARKDDV+TN+D+  AL QVD  MM+ +FTSLV+Y  LE+AYN+FILNP
Sbjct:   188 VTSVIEHAIKVLARKDDVATNKDEESALLQVDAEMMEFIFTSLVEYFHLEDAYNLFILNP 247

Query:   244 KHE-KRARYGYRRGLSDSEITFLKENKDLQTKILQSGNIPESILALDKIRRPLYEKHPMM 302
             KH+ K+A+YGYRRG S+SEI++LKENK++   +LQSG   E+ILA D +R+PLY++HPM+
Sbjct:   248 KHDNKKAKYGYRRGFSESEISYLKENKEILKNLLQSGKPSENILAFDMVRKPLYDRHPML 307

Query:   303 KFSWTIAEDTDTAEWYNICLDPLNNVEKFYRGKETADIIQSKVLQLLKGXXXXXXXXXXX 362
             KFSWT AE+TDTAEW+N C D LN +E+   GK+ A++IQSKVLQLL+G           
Sbjct:   308 KFSWTNAEETDTAEWFNACQDALNKLEQLSLGKDAAELIQSKVLQLLRGKNEDMKVFLEK 367

Query:   363 XXXSGDLSNLHAECLTDSWIGNNRWAFIDLTAGPFSWGPAVGGEGVRTELSLPNVGKTIG 422
                +GD SNL+AECLTD WIG  RWAFIDLTAGPFSWGP+VGGEGVRTELSLPNVG TIG
Sbjct:   368 DLRAGDFSNLNAECLTDIWIGKGRWAFIDLTAGPFSWGPSVGGEGVRTELSLPNVGTTIG 427

Query:   423 AVEEISEDEAEDRLQDAIQEKFAVFGDKDHQAIDILLAEIDIYELFAFKHCKGRKVKLAL 482
             AV EISEDEAED+LQ AIQ+KF+VFG+ DHQA+DILLAEID+YELFAFKHCKGRKVKLAL
Sbjct:   428 AVAEISEDEAEDKLQTAIQDKFSVFGENDHQAVDILLAEIDVYELFAFKHCKGRKVKLAL 487

Query:   483 CEELDERMQDLKNELQSFEGEEYDENHKRKAIEALRRMENWNLFSDTHEEFQNYTVARDT 542
             CEELDERM+DLK ELQSF+GEEYDE HKRKA++ALRRME+WNLFSD  EEFQNYTVARDT
Sbjct:   488 CEELDERMRDLKTELQSFDGEEYDETHKRKAMDALRRMESWNLFSDEREEFQNYTVARDT 547

Query:   543 FLAHLGATLWGSMRHVISPSIADGAFHYYETISFQLFFITQEKVRQVKQLPVNLKSLMDG 602
             FLAHLGATLWGSMRH+ISPS+ADGAFH+YE ISFQL FITQEKVRQ+KQLPV+LK+LMDG
Sbjct:   548 FLAHLGATLWGSMRHIISPSVADGAFHHYEKISFQLVFITQEKVRQIKQLPVDLKALMDG 607

Query:   603 LSSLLLPSQKPVFSQRMLTLSEDPXXXXXXXXXXXXXXXPMLLVNGTYRKTVRSYVDSAI 662
             LSSLLLPSQKP+FSQ MLTLSEDP               P+LLVNGTYRKTVRSY+DS+I
Sbjct:   608 LSSLLLPSQKPLFSQHMLTLSEDPALAMAFSVARRAAAVPLLLVNGTYRKTVRSYLDSSI 667

Query:   663 LQYQLQRMNDRDSLKGAHAHSRSTLEVPIFWFIHGDPLLVDKHYQAKALSDMVIVVQSEE 722
             LQYQLQR+ND  SLKG HAHSRSTLE+PIFW I GDPLL+DKHYQAKALS+MV+VVQSE 
Sbjct:   668 LQYQLQRVNDHTSLKGGHAHSRSTLEIPIFWLISGDPLLIDKHYQAKALSNMVVVVQSEA 727

Query:   723 PSWESHLQCNGQSLLWDLRSPIKAALASVSEHLAGLLPLHLVYSQAHETAIEDWIWSVGC 782
              SWESHLQCNG+SLLWDLRSP+KAA+ASV+EHLAGLLPLHLVYS AHE+AIEDW WSVGC
Sbjct:   728 SSWESHLQCNGRSLLWDLRSPVKAAMASVAEHLAGLLPLHLVYSVAHESAIEDWTWSVGC 787

Query:   783 NPFSITSQGWHISQFQSDTIARSYIISTLEESIQTVNSAIHLLLMERTTEKTFKLFQSQE 842
             NPFS+TSQGW +SQFQSDTIARSY+I+ LEESIQ VNS IHLL +ERT +KTFKLFQS+E
Sbjct:   788 NPFSVTSQGWLLSQFQSDTIARSYMITALEESIQAVNSGIHLLRLERTNKKTFKLFQSRE 847

Query:   843 RELVNKYNYVVSLWRRISTVTGDLRYADAMRQLYTLEDASKGFVDQVNATIALLHPIHCT 902
             REL+NKY YVVSLWRR+S V G+ RY DAMR L+TLE+A+  FV +VNAT+ +LHPIHCT
Sbjct:   848 RELMNKYKYVVSLWRRLSNVAGETRYGDAMRFLHTLEEATSSFVREVNATVGVLHPIHCT 907

Query:   903 RDRKVDVEFDLTTIPAFLIVLGILYVLLKPRRPKPKIN 940
             ++RKV VE D+TTIPAF+IVL +LY +L+PR PKPKIN
Sbjct:   908 KERKVKVEVDMTTIPAFIIVLILLYAVLRPRAPKPKIN 945




GO:0005739 "mitochondrion" evidence=ISM
GO:0010584 "pollen exine formation" evidence=IMP
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
DICTYBASE|DDB_G0285083 DDB_G0285083 [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2098423 AT3G28720 "AT3G28720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0273745 DDB_G0273745 "transmembrane protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0273189 DDB_G0273189 "transmembrane protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0279945 DDB_G0279945 [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00033781001
SubName- Full=Chromosome undetermined scaffold_69, whole genome shotgun sequence; (963 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query940
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 78.0 bits (191), Expect = 9e-15
 Identities = 83/653 (12%), Positives = 189/653 (28%), Gaps = 159/653 (24%)

Query: 75  VLNYTRAGNIANYLKLMEVDSMY-LPVPVN---FIFIGFEGNGNQDFQLHPDELER---- 126
           V +  +     + L   E+D +      V+    +F        +  Q   +E+ R    
Sbjct: 38  VQDMPK-----SILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK 92

Query: 127 WFL-------------KIDHIFEHTRVPPIGEVLAPFYRTSVDKVQ--RHHLPTISHINY 171
           + +                +I +  R+    +V A +  + +      R  L  +     
Sbjct: 93  FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN 152

Query: 172 NFSVHAIQMGE--KVTSVFEHAIKVLARKDDVSTNRDDVDALWQVDV----SMMDVLFTS 225
              +    +    K  +    A+ V      V    D     W +++    S   VL   
Sbjct: 153 -VLIDG--VLGSGK--TWV--ALDVC-LSYKVQCKMDF-KIFW-LNLKNCNSPETVL--- 199

Query: 226 LVDYLQLENAYNIFILNPKHEKRARYGYRRGLSDSEITFLKENKDLQTKILQSGNIPESI 285
                 L+     + ++P    R+ +      S +    +   +    ++L+S      +
Sbjct: 200 ----EMLQKLL--YQIDPNWTSRSDH------SSNIKLRIHSIQAELRRLLKSKPYENCL 247

Query: 286 LALDKIRRPLYEKHPMMKFSWTI------AEDTDTAEWYNICLDPLNNVEKFYRGKETAD 339
           L L  ++            S  I       + TD           L++        E   
Sbjct: 248 LVLLNVQNAKAWNA--FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305

Query: 340 IIQSKVLQLLKGKNEDLKFLLEKELKSGD--LSNLHAECLTDSWIGNNRWAFIDLTAGPF 397
           ++  K L     + +DL     +E+ + +    ++ AE + D   G   W          
Sbjct: 306 LL-LKYLDC---RPQDLP----REVLTTNPRRLSIIAESIRD---GLATWDN-------- 346

Query: 398 SWGPAVGGEGVRTELSLPNVGKTIGA-VEEISEDEAEDRLQDAIQEKFAVFGDKD----H 452
            W            ++   +   I + +  +   E             +VF         
Sbjct: 347 -W----------KHVNCDKLTTIIESSLNVLEPAEYRKMFDR-----LSVF-PPSAHIPT 389

Query: 453 QAIDILLAEIDIYELFAF-KHCKGRKVKLALCEELDERMQ----DLKNELQSFEGEEYDE 507
             + ++  ++   ++            K +L E+  +        +  EL+  + E    
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKL----HKYSLVEKQPKESTISIPSIYLELKV-KLENEYA 444

Query: 508 NHKRKAIEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHVISPSIADGA 567
            H R  ++     + ++           Y      F +H+G        H+ +    +  
Sbjct: 445 LH-RSIVDHYNIPKTFDSDDLIPPYLDQY------FYSHIG-------HHLKNIEHPE-R 489

Query: 568 FHYYETISFQLFFITQEKVRQVKQLPVNLKSLMDGLSSL-----LLPSQKPVFSQRMLTL 622
              +  +     F+ ++K+R          S+++ L  L      +    P + + +  +
Sbjct: 490 MTLFRMVFLDFRFL-EQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAI 548

Query: 623 SEDPALAMAFSVARRAAAVPMLLVNGTYRKTVR---SYVDSAILQ---YQLQR 669
                  + F    +       L+   Y   +R      D AI +    Q+QR
Sbjct: 549 -------LDFL--PKIEEN---LICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00